BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005136
(712 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/707 (69%), Positives = 605/707 (85%), Gaps = 4/707 (0%)
Query: 1 MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
MK +L++L +INP T F +Y +TC+ LLK++T+Q L+ G ALH HL KTGI E+Y++
Sbjct: 1 MKNTLKTLLAINPATHFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISI 60
Query: 61 RLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
+LLIMYL RKS EA++I KD +GFDLVVHNCMI+AN+Q GNL+EA++LFD MP+ NE+S
Sbjct: 61 KLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEIS 120
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
WTALISGFMK+GRV ESMWYFERNPFQNV+SWTAAI G+VQNGFS EA+KLF+KLLES V
Sbjct: 121 WTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEV 180
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KPN+VTF+S+ +ACA + DF LG+SV GLI K G+E ++V NSLITL L+MGE+ LAR
Sbjct: 181 KPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLARE 240
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VFDRME++DVVSWT ILD+++EM +LGEARRIFDEMP+RNEVSWS MIARY QSGYPEE+
Sbjct: 241 VFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEES 300
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
RLF +M + FKPN SCFS +LSALAS++AL++GM++H HV KIG EKDVF+S++LID+
Sbjct: 301 LRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDM 360
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y KCGETKDGR +FD+I+EK+ +VSWN+M+GGY LNG MEEAK LF+ MP RN+VSWS
Sbjct: 361 YCKCGETKDGRFLFDTILEKN---MVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWS 417
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
AII+G+L+ +QFD +F VFNEM+L GEIPNKSTFSS+LCA AS ASL+KGK+LHGKI+KL
Sbjct: 418 AIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKL 477
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G D ++GTALTD YAKSGDIESS++VF+RMP KNE+SWT M++GLAESG A+ES+ LF
Sbjct: 478 GIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLF 537
Query: 541 EEMEKT-SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
EEMEKT SI PNE+ L+VLFACSHSGLVDKGL YFNSME +Y +KP GRH+TCVVDMLS
Sbjct: 538 EEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLS 597
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+GRL EAE+FI SMPF+P++NAWA+LLSGCKTYKNE++AER LW++AE++ AGYVL
Sbjct: 598 RAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVL 657
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
LSNIYASAGRW D + VRKLM KGL+KSGGCSWVE+R++VH F+ +
Sbjct: 658 LSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSE 704
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/705 (68%), Positives = 594/705 (84%), Gaps = 4/705 (0%)
Query: 1 MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
M + R+L +I+P+ SF +Y +TC+ LLK ++Q L+ QG LH HLIKTG +RY+
Sbjct: 1 MATTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAI 60
Query: 61 RLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
+LLI+YL RK E ++IVK+ +G DLVV NCMI+A +QWGNL +A+ LFD MPERNEVS
Sbjct: 61 KLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVS 120
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W+ALISG MK+GRVEESMWYFERNPFQNV+SWTAAI GFV+NG +FEALKLF +LLESGV
Sbjct: 121 WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGV 180
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+PN+VTF+S+ +AC E+ DF LG+S+ GL+ KAGFE ++SV NSLITLSL+MGE+DLAR
Sbjct: 181 RPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARR 240
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VFDRMEKRDVVSWT ILD ++E GDL EARRIFDEMPERNE+SWS MIARY+QSGY EEA
Sbjct: 241 VFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEA 300
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+LF +M + FKPN SCF+ LSALASL+AL +G+++H HV KIGI+KDVFI ++LIDL
Sbjct: 301 LKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDL 360
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y KCG+ DGRLVFD I+EK+ VV WNSM+GGY +NG++EE +ELF+ +P++NDVSW
Sbjct: 361 YCKCGKPDDGRLVFDLILEKN---VVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWG 417
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
II+GYLE++Q + V VFN +L+SG+ PNKSTFSSVLCA AS+ASL+KG ++HGKIIKL
Sbjct: 418 TIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKL 477
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G YD+F+GTALTD YAK GDI SS++VF+RMP+KNEISWTVM++GLAESG+A ES+ LF
Sbjct: 478 GIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILF 537
Query: 541 EEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
EEME+TS + PNEL +LSVLFACSH GLVDKGL YFNSME +Y IKP G+HYTCVVD+LS
Sbjct: 538 EEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLS 597
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
RSGRL EAE+FI ++PF+P++NAWA+LLSGCK YK+E+IAER K LW+LAE + AGYVL
Sbjct: 598 RSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVL 657
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
LSNIYASAGRWID N+RKLM EKGL+KSGGCSWVEVRNQVH F+
Sbjct: 658 LSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFY 702
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/707 (68%), Positives = 595/707 (84%), Gaps = 4/707 (0%)
Query: 1 MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
M + R+L +I+P+ SF +Y +TC+ LLK ++Q L+ QG LH HLIKTG +RY+
Sbjct: 1 MATTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAI 60
Query: 61 RLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
+LLI+YL RK E ++IVK+ +G DLVV NCMI+A +QWGNL +A+ LFD MPERNEVS
Sbjct: 61 KLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVS 120
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W+ALISG MK+GRVEESMWYFERNPFQNV+SWTAAI GFV+NG +FEALKLF +LLESGV
Sbjct: 121 WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGV 180
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+PN+VTF+S+ +AC E+ DF LG+S+ GL+ KAGFE ++SV NSLITLSL+MGE+DLAR
Sbjct: 181 RPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARR 240
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VFDRMEKRDVVSWT ILD ++E GDL EARRIFDEMPERNE+SWS MIARY+QSGY EEA
Sbjct: 241 VFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEA 300
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+LF +M + FKPN SCF+ LSALASL+AL +G+++H HV KIGI+KDVFI ++LIDL
Sbjct: 301 LKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDL 360
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y KCG+ DGRLVFD I+EK+ VV WNSM+GGY +NG++EE +ELF+ +P++NDVSW
Sbjct: 361 YCKCGKPDDGRLVFDLILEKN---VVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWG 417
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
II+GYLE++Q + V VFN +L+SG+ PNKSTFSSVLCA AS+ASL+KG ++HGKIIKL
Sbjct: 418 TIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKL 477
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G YD+F+GTALTD YAK GDI SS++VF+RMP+KNEISWTVM++GLAESG+A ES+ LF
Sbjct: 478 GIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILF 537
Query: 541 EEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
EEME+TS + PNEL +LSVLFACSH GLVDKGL YFNSME +Y IKP G+HYTCVVD+LS
Sbjct: 538 EEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLS 597
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
RSGRL EAE+FI ++PF+P++NAWA+LLSGCK YK+E+IAER K LW+LAE + AGYVL
Sbjct: 598 RSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVL 657
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
LSNIYASAGRWID N+RKLM EKGL+KSGGCSWVEVRNQVH F+ +
Sbjct: 658 LSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSE 704
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/707 (68%), Positives = 594/707 (84%), Gaps = 4/707 (0%)
Query: 1 MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
M + R+L +I+P+ SF +Y +TC+ LLK ++Q L+ QG LH HLIKTG +RY+
Sbjct: 1 MATTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAI 60
Query: 61 RLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
+LLI+YL RK E ++IVK+ +G DLVV NCMI+A +QWGNL +A+ LFD MPERNEVS
Sbjct: 61 KLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVS 120
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W+ALISG MK+GRVEESMWYFERNPFQNV+SWTAAI GFV+NG +FEALKLF +LLESGV
Sbjct: 121 WSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGV 180
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+PN+VTF+S+ +AC E+ DF LG+S+ GL+ KAGFE ++SV NSLITLSL+MGE+DLAR
Sbjct: 181 RPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARR 240
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VFDRMEKRDVVSWT ILD ++E GDL EARRIFDEMPERNE+SWS MIARY+QSGY EEA
Sbjct: 241 VFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEA 300
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+LF +M + FKPN SCF+ LSALASL+AL +G+++H HV KIGI+KDVFI ++LIDL
Sbjct: 301 LKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDL 360
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y KCG+ DGRLVFD I+EK+ VV WNSM+GGY +NG++EE +ELF+ +P++ND SW
Sbjct: 361 YCKCGKPDDGRLVFDLILEKN---VVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWG 417
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
IJ+GYLE++Q + V VFN +L+SG+ PNKSTFSSVLCA AS+ASL+KG ++HGKIIKL
Sbjct: 418 TIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKL 477
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G YD+F+GTALTD YAK GDI SS++VF+RMP+KNEISWTVM++GLAESG+A ES+ LF
Sbjct: 478 GIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILF 537
Query: 541 EEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
EEME+TS + PNEL +LSVLFACSH GLVDKGL YFNSME +Y IKP G+HYTCVVD+LS
Sbjct: 538 EEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLS 597
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
RSGRL EAE+FI ++PF+P++NAWA+LLSGCK YK+E+IAER K LW+LAE + AGYVL
Sbjct: 598 RSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVL 657
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
LSNIYASAGRWID N+RKLM EKGL+KSGGCSWVEVRNQVH F+ +
Sbjct: 658 LSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSE 704
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/716 (46%), Positives = 468/716 (65%), Gaps = 24/716 (3%)
Query: 16 SFNSYIETCLCLLKDI----------------TSQNLVIQGRALHGHLIKTGIHKERYLT 59
+F SY ETC LL+ S + + +LH H +++G+ +R +
Sbjct: 59 AFKSYAETCATLLRLCRAAATATSHAAPASFSPSSDRLPLALSLHAHAVRSGVAADRSVA 118
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLV---VHNCMINANIQWGNLEEAQRLFDGMPER 116
+ LL Y ++ E + D D ++ M++ +++ G++ A+RLFDGMP+R
Sbjct: 119 SHLLTTYAAFARAAERDRAFGDCVAADAASPFAYDFMVSEHVKAGDIASARRLFDGMPDR 178
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
VS+T ++ MK GRV E++ +E+ P +V +TA I GFV+N AL +F K+L
Sbjct: 179 TVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRKML 238
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEV 235
V+PN +T + KAC +F L LS+ GL K+ F E + V NSLITL L+MG+
Sbjct: 239 SCRVRPNGITIVCMIKACVGAGEFGLALSIVGLAIKSNFFESSIEVQNSLITLYLRMGDA 298
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
AR VFD M+ +DVVSWT +LDV+ E GDL ARR+ D MPERNEVSW +IAR+ Q G
Sbjct: 299 AAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRG 358
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
EA +L+ QM +PN SCFS VLSA ASL+ LR G +HA LK+G +VF+S
Sbjct: 359 NAAEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSC 418
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+LID+Y KC + D + +FD++ +K++ V WNS++ GY NG+M EA LF MP RN
Sbjct: 419 SLIDMYCKCNKCGDAQTIFDTLPQKNI---VCWNSLVSGYSYNGKMVEAMYLFKKMPARN 475
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
SW+ IISGY +++QF FN ML SG++P + TFSSVL A A++ SL GK H
Sbjct: 476 LASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHA 535
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
K IKLG +F+GTAL+D YAKSGD++SS+R+F +MP++N+++WT M++GLAE+G+A+E
Sbjct: 536 KTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEE 595
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
SI LFE+M T +TPNE T L++LFACSH GLV++ + YF+ M+ + I P +HYTC+V
Sbjct: 596 SILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQAL-GISPKEKHYTCMV 654
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
D+L+R+GRL+EAE + P + ++N+WA+LLS C TY+NE+IAERA K L +LA+++ A
Sbjct: 655 DVLARAGRLAEAEALLMKTPSKSEANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTA 714
Query: 656 GYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
GYVLLSN+YAS GRW DA +R LM L+K GGCSWV+VR Q H FF +P
Sbjct: 715 GYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHP 770
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/718 (45%), Positives = 464/718 (64%), Gaps = 26/718 (3%)
Query: 16 SFNSYIETCLCLLK------------------DITSQNLVIQGRALHGHLIKTGIHKERY 57
+F SY ETC LL+ ++S + +LH H +++G+ +
Sbjct: 59 AFKSYAETCATLLRLCRATATATATSNAALASSLSSSERLPLALSLHAHAVRSGVAADTS 118
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDL---NGFDLVVHNCMINANIQWGNLEEAQRLFDGMP 114
+ + LL Y ++ E + D ++ M++ +++ G++ A+ LFDGMP
Sbjct: 119 VASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDFMVHEHVKAGDIASARGLFDGMP 178
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
ERN VS+T ++ MK GRV E++ +E+ P +V +TA I GFV+N AL +F K
Sbjct: 179 ERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRK 238
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMG 233
++ GV+PN +TF + KAC +F L +S+ G K+ F E + V NSLITL L+MG
Sbjct: 239 MVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMG 298
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+ AR VFD M+ +DVVSWT +LDV+ E GDL ARR+ D MPERNEVSW +IAR+ Q
Sbjct: 299 DAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQ 358
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G EA +L+ QM +PN SCFS VLSA A+L+ LR G +HA LK+G +VF+
Sbjct: 359 RGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFV 418
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
S++LID+Y KC + +D + +FD++ EK++ V WNS+ GY NG+M EA LF MP
Sbjct: 419 SSSLIDMYCKCKKCRDAQTIFDTLPEKNI---VCWNSLASGYSYNGKMVEAMYLFKKMPA 475
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
RN SW+ IISGY +++QF FN ML SG++P + TFSSVL A A++ SL GK
Sbjct: 476 RNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMA 535
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H K IKLG +F+GTAL+D YAKSGD++SS+R+F +MP++N+++WT M++GLAE+G+A
Sbjct: 536 HAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFA 595
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+ESI L E+M T +TPNE T L++LFACSH GLV++ + YF M+ + I P +HYTC
Sbjct: 596 EESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQA-WGISPKEKHYTC 654
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+VD+L+R+GRL EAE + P + ++N+WA+LLS C TYKNE+I ERA K L +L +++
Sbjct: 655 MVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDN 714
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
AGYVLLSN+YAS GRW DA +R LM L+K GGCSWV+VR Q H FF +P
Sbjct: 715 TAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHP 772
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/718 (45%), Positives = 464/718 (64%), Gaps = 26/718 (3%)
Query: 16 SFNSYIETCLCLLK------------------DITSQNLVIQGRALHGHLIKTGIHKERY 57
+F SY ETC LL+ ++S + +LH H +++G+ +
Sbjct: 60 AFKSYAETCATLLRLCRATATATATSNAALASSLSSSERLPLALSLHAHAVRSGVAADTS 119
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDL---NGFDLVVHNCMINANIQWGNLEEAQRLFDGMP 114
+ + LL Y ++ E + D ++ M++ +++ G++ A+ LFDGMP
Sbjct: 120 VASHLLTTYAAFARAAECDRAFGDCVAAGAASPFTYDFMVHEHVKAGDIASARGLFDGMP 179
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
ER+ VS+T ++ MK GRV E++ +E+ P +V +TA I GFV+N AL +F K
Sbjct: 180 ERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRK 239
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMG 233
++ GV+PN +TF + KAC +F L +S+ G K+ F E + V NSLITL L+MG
Sbjct: 240 MVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMG 299
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+ AR VFD M+ +DVVSWT +LDV+ E GDL ARR+ D MPERNEVSW +IAR+ Q
Sbjct: 300 DAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQ 359
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G EA +L+ QM +PN SCFS VLSA A+L+ LR G +HA LK+G +VF+
Sbjct: 360 RGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFV 419
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
S++LID+Y KC + +D + +FD++ EK++ V WNS+ GY NG+M EA LF MP
Sbjct: 420 SSSLIDMYCKCKKCRDAQTIFDTLPEKNI---VCWNSLASGYSYNGKMVEAMYLFKKMPA 476
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
RN SW+ IISGY +++QF FN ML SG++P + TFSSVL A A++ SL GK
Sbjct: 477 RNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMA 536
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H K IKLG +F+GTAL+D YAKSGD++SS+R+F +MP++N+++WT M++GLAE+G A
Sbjct: 537 HAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGLA 596
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+ESI LFE+M T +TPNE T L++LFACSH GLV++ + YF M+ + I P +HYTC
Sbjct: 597 EESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQA-WGISPKEKHYTC 655
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+VD+L+R+GRL EAE + P + ++N+WA+LLS C TYKNE+I ERA K L +L +++
Sbjct: 656 MVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDN 715
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
AGYVLLSN+YAS GRW DA +R LM L+K GGCSWV+VR Q H FF +P
Sbjct: 716 TAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHP 773
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/713 (45%), Positives = 467/713 (65%), Gaps = 22/713 (3%)
Query: 17 FNSYIETCLCLLK---DITSQNLVIQGRA-----------LHGHLIKTGIHKERYLTTRL 62
F +Y ETC LL+ +++ + + A LH H +++G+ +R + + L
Sbjct: 62 FKTYSETCASLLRLCRAMSATSTTMPSYAPSSGCLPLVLSLHAHALRSGLATDRSVASNL 121
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLV---VHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
L Y ++ + ++ +D D ++ M++ +++ G++ A+RLF GMPE++ V
Sbjct: 122 LTAYAAFARAGDRDQAFRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVV 181
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
S+T ++ MK G V +++ +ER P +V +TA I GFV+N +A +F K+L
Sbjct: 182 SYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCS 241
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLA 238
V+PN VT + KAC +F L + V GL K FEK + V NSLITL L+MG+ A
Sbjct: 242 VRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAA 301
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
R VFD ME RDVVSWT +LDV+ ++GDL ARR+ D MP RNEVSW +IAR+ Q G
Sbjct: 302 RRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTA 361
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EA +L+ QM +PN SCFS VLSA A+L+ LR G +HA+ LK+G ++F+S++LI
Sbjct: 362 EALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLI 421
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+Y KC + + VF+S+ EK+ V WNS+I GY NG+M EA+ LF+ MP RN VS
Sbjct: 422 DMYCKCKQCTYAQRVFNSLPEKNT---VCWNSLISGYSWNGKMVEAEGLFNKMPARNSVS 478
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+ +ISGY E+++F F ML SG IP + T SSVL A A++ SLE G+ +H +I+
Sbjct: 479 WNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIV 538
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
KLG ++F+GTAL D YAKSGD++SSRRVF +MP+KN I+WT MV+GLAE+G+A+ESI+
Sbjct: 539 KLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESIS 598
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LFE+M + I PNE T L++LFACSH GLV++ + YF +M+ + I P +HYTC+VD+L
Sbjct: 599 LFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVL 657
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
+R+G L EAE+ + + E D+++W+SLLS C TY+N++I ERA K L +L +++ AGYV
Sbjct: 658 ARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYV 717
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LLSN+YAS G+W DA R LM L+K GCSW+++R Q H FF + +P
Sbjct: 718 LLSNMYASCGKWKDAAETRILMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHP 770
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/713 (45%), Positives = 466/713 (65%), Gaps = 22/713 (3%)
Query: 17 FNSYIETCLCLLK---DITSQNLVIQGRA-----------LHGHLIKTGIHKERYLTTRL 62
F +Y ETC LL+ +++ + + A LH H ++G+ +R + + L
Sbjct: 62 FKTYSETCASLLRLCRAMSATSTTMPSYAPSSGCLPLVLSLHAHAFRSGLTADRSVASNL 121
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLV---VHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
L Y ++ + ++ +D D ++ M++ +++ G++ A+RLF GMPE++ V
Sbjct: 122 LTAYAAFTRAADRDQAFRDCVAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVV 181
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
S+T ++ MK G V +++ +ER P +V +TA I GFV+N +A +F K+L
Sbjct: 182 SYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCS 241
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLA 238
V+PN VT + KAC +F L + V GL K FEK + V NSLITL L+MG+ A
Sbjct: 242 VRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAA 301
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VFD ME RDVVSWT +LDV+ ++GDL ARR+ D MP RNEVSW +IAR+ Q G
Sbjct: 302 HRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTA 361
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EA +L+ QM +PN SCFS VLSA A+L+ LR G +HA+ LK+G ++F+S++LI
Sbjct: 362 EALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLI 421
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+Y KC + + VF+S+ EK+ V WNS+I GY NG+M EA+ LF+ MP RN VS
Sbjct: 422 DMYCKCKQCTYAQRVFNSLPEKNT---VCWNSLISGYSWNGKMVEAEGLFNKMPARNSVS 478
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+ +ISGY E+++F F ML SG IP + T SSVL A A++ SLE G+ +H +I+
Sbjct: 479 WNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIV 538
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
KLG ++F+GTAL+D YAKSGD++SSRRVF +MP+KN I+WT MV+GLAE+G+A+ESI+
Sbjct: 539 KLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESIS 598
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LFE+M + I PNE T L++LFACSH GLV++ + YF +M+ + I P +HYTC+VD+L
Sbjct: 599 LFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVL 657
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
+R+G L EAE+ + + E D+++W+SLLS C TY+N++I ERA K L +L +++ AGYV
Sbjct: 658 ARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYV 717
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LLSN+YAS G+W DA R LM L+K GCSW+++R Q H FF + +P
Sbjct: 718 LLSNMYASCGKWKDAAETRILMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHP 770
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/712 (45%), Positives = 465/712 (65%), Gaps = 21/712 (2%)
Query: 16 SFNSYIETCLCLLK-----------DITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
SF SY ETC +L+ S NL + ++H H + +G+ + + + LL
Sbjct: 63 SFKSYAETCASILRLCSAAAAASGTAAASSNLPLV-LSIHAHALVSGLTADGSVASHLLT 121
Query: 65 MYLGSRKSLEANEIVKD----LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
Y ++ + + +D + ++ M+ +++ G++ A+RLFDGMPER+ VS
Sbjct: 122 AYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVS 181
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+T ++ MK G V +++ + + P +V +TA I GFV N +AL +F ++L GV
Sbjct: 182 YTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGV 241
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEVDLAR 239
PNE+T S+ KAC +F L +S+ GL K+ +K++ V NSLITL L+ G+ D AR
Sbjct: 242 SPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAAR 301
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+FD ME RDVVSWT +LDV+ E+GDL ARR+ DEMPERNEVSW ++AR+ Q G +E
Sbjct: 302 RMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKE 361
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A L+ QM +PN SCFS VL A ASL+ LRSG +H LK+ +VF+S+ALID
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y KC + D +++F S+ +K++ V WNS+I GY N +M EA+ELF MP RN SW
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNI---VCWNSLISGYSNNSKMVEAEELFKKMPARNVASW 478
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
++IISGY +++QF F+ ML SG+ P + TFSSVL A AS+ SLE GK +H KIIK
Sbjct: 479 NSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIK 538
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG +F+GTAL+D YAKSGD++SS+RVF MP +N+++WT M++GLAE+G+A+ESI L
Sbjct: 539 LGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILL 598
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
FE+M ITPNE T L++LFACSHSGLV+ + YF M+ I P +HYTC+VD+L+
Sbjct: 599 FEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLA 657
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G L+EAED + + + ++N+WA+LLS C Y+N+++ ERA K L +L +++ AGYVL
Sbjct: 658 RAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVL 717
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LSN+YAS G+W DA +R LM L+K GGCSWV++R Q FF +P
Sbjct: 718 LSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRGQYQAFFSWETKHP 769
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 321/700 (45%), Positives = 462/700 (66%), Gaps = 21/700 (3%)
Query: 16 SFNSYIETCLCLLK-----------DITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
SF SY ETC +L+ S NL + ++H H + +G+ + + + LL
Sbjct: 63 SFKSYAETCASILRLCSAAAASSGTAAASSNLPLV-LSIHAHALVSGLTADGSVASHLLT 121
Query: 65 MYLGSRKSLEANEIVKD----LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
Y ++ + + +D + ++ M+ +++ G++ A+RLFDGMPER+ VS
Sbjct: 122 AYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVS 181
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+T ++ MK G V +++ + + P +V +TA I GFV N +AL +F ++L GV
Sbjct: 182 YTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGV 241
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEVDLAR 239
PNE+T S+ KAC +F L +S+ GL K+ +K++ V NSLITL L+ G+ D AR
Sbjct: 242 SPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAAR 301
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+FD ME RDVVSWT +LDV+ E+GDL ARR+ DEMPERNEVSW ++AR+ Q G +E
Sbjct: 302 RMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKE 361
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A L+ QM +PN SCFS VL A ASL+ LRSG +H LK+ +VF+S+ALID
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y KC + D +++F S+ +K++ V WNS+I GY N +M EA+ELF MP RN SW
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNI---VCWNSLISGYSNNSKMVEAEELFKKMPARNVASW 478
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
++IISGY +++QF F+ ML SG+ P + TFSSVL A AS+ SLE GK +H KIIK
Sbjct: 479 NSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIK 538
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG +F+GTAL+D YAKSGD++SS+RVF MP +N+++WT M++GLAE+G+A+ESI L
Sbjct: 539 LGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILL 598
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
FE+M ITPNE T L++LFACSHSGLV+ + YF M+ I P +HYTC+VD+L+
Sbjct: 599 FEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLA 657
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G L+EAED + + + ++N+WA+LLS C Y+N+++ ERA K L +L +++ AGYVL
Sbjct: 658 RAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVL 717
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
LSN+YAS G+W DA +R LM L+K GGCSWV++R++
Sbjct: 718 LSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRDE 757
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 321/700 (45%), Positives = 462/700 (66%), Gaps = 21/700 (3%)
Query: 16 SFNSYIETCLCLLK-----------DITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
SF SY ETC +L+ S NL + ++H H + +G+ + + + LL
Sbjct: 63 SFKSYAETCASILRLCSAAAAASGTAAASSNLPLV-LSIHAHALVSGLTADGSVASHLLT 121
Query: 65 MYLGSRKSLEANEIVKD----LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
Y ++ + + +D + ++ M+ +++ G++ A+RLFDGMPER+ VS
Sbjct: 122 AYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVS 181
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+T ++ MK G V +++ + + P +V +TA I GFV N +AL +F ++L GV
Sbjct: 182 YTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGV 241
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEVDLAR 239
PNE+T S+ KAC +F L +S+ GL K+ +K++ V NSLITL L+ G+ D AR
Sbjct: 242 SPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAAR 301
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+FD ME RDVVSWT +LDV+ E+GDL ARR+ DEMPERNEVSW ++AR+ Q G +E
Sbjct: 302 RMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKE 361
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A L+ QM +PN SCFS VL A ASL+ LRSG +H LK+ +VF+S+ALID
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y KC + D +++F S+ +K++ V WNS+I GY N +M EA+ELF MP RN SW
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNI---VCWNSLISGYSNNSKMVEAEELFKKMPARNVASW 478
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
++IISGY +++QF F+ ML SG+ P + TFSSVL A AS+ SLE GK +H KIIK
Sbjct: 479 NSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIK 538
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG +F+GTAL+D YAKSGD++SS+RVF MP +N+++WT M++GLAE+G+A+ESI L
Sbjct: 539 LGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILL 598
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
FE+M ITPNE T L++LFACSHSGLV+ + YF M+ I P +HYTC+VD+L+
Sbjct: 599 FEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLA 657
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G L+EAED + + + ++N+WA+LLS C Y+N+++ ERA K L +L +++ AGYVL
Sbjct: 658 RAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVL 717
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
LSN+YAS G+W DA +R LM L+K GGCSWV++R++
Sbjct: 718 LSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRDE 757
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 321/700 (45%), Positives = 462/700 (66%), Gaps = 21/700 (3%)
Query: 16 SFNSYIETCLCLLK-----------DITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
SF SY ETC +L+ S NL + ++H H + +G+ + + + LL
Sbjct: 63 SFKSYAETCASILRLCSAAAAASGTAAASSNLPLV-LSIHAHALVSGLTADGSVASHLLT 121
Query: 65 MYLGSRKSLEANEIVKD----LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
Y ++ + + +D + ++ M+ +++ G++ A+RLFDGMPER+ VS
Sbjct: 122 AYAAFARAADRDGAFRDCVSVVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVS 181
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+T ++ MK G V +++ + + P +V +TA I GFV N +AL +F ++L GV
Sbjct: 182 YTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGV 241
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEVDLAR 239
PNE+T S+ KAC +F L +S+ GL K+ +K++ V NSLITL L+ G+ D AR
Sbjct: 242 SPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAAR 301
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+FD ME RDVVSWT +LDV+ E+GDL ARR+ DEMPERNEVSW ++AR+ Q G +E
Sbjct: 302 RMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKE 361
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A L+ QM +PN SCFS VL A ASL+ LRSG +H LK+ +VF+S+ALID
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y KC + D +++F S+ +K++ V WNS+I GY N +M EA+ELF MP RN SW
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNI---VCWNSLISGYSNNSKMVEAEELFKKMPARNVASW 478
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
++IISGY +++QF F+ ML SG+ P + TFSSVL A AS+ SLE GK +H KIIK
Sbjct: 479 NSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIK 538
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG +F+GTAL+D YAKSGD++SS+RVF MP +N+++WT M++GLAE+G+A+ESI L
Sbjct: 539 LGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILL 598
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
FE+M ITPNE T L++LFACSHSGLV+ + YF M+ I P +HYTC+VD+L+
Sbjct: 599 FEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLA 657
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G L+EAED + + + ++N+WA+LLS C Y+N+++ ERA K L +L +++ AGYVL
Sbjct: 658 RAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVL 717
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
LSN+YAS G+W DA +R LM L+K GGCSWV++R++
Sbjct: 718 LSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRDE 757
>gi|242038427|ref|XP_002466608.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
gi|241920462|gb|EER93606.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
Length = 752
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 318/690 (46%), Positives = 451/690 (65%), Gaps = 22/690 (3%)
Query: 16 SFNSYIETCLCLLKDI--------------TSQNLVIQGRALHGHLIKTGIHKERYLTTR 61
+F SY ETC LL+ S + +LH H +++G+ +R + +
Sbjct: 66 AFKSYSETCASLLRHCRATSAAATATPAYAPSSGCLPLVLSLHAHTLRSGLAADRSVASN 125
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLV---VHNCMINANIQWGNLEEAQRLFDGMPERNE 118
LL Y ++ + + +D D ++ M++ +++ G++ A+RLFDGMPE++
Sbjct: 126 LLTAYAAFARAADRDRAFRDCVSADAASSFTYDFMVSEHVKAGDIASARRLFDGMPEKSV 185
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
VS+T ++ MK G V++++ +ER P +V +TA I GFV+N +A +F K+L
Sbjct: 186 VSYTTMVDALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGFVRNELHKDAFPVFRKMLRC 245
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDL 237
V+PN VT + KAC +F L + V GL K FEK + V NSLITL L+MG+
Sbjct: 246 SVRPNVVTLICVIKACVGAGEFDLAMGVVGLAIKWNLFEKSIEVHNSLITLYLRMGDAAA 305
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A VFD ME RDVVSWT +LDV+ E+GDL ARR+ D MPERNEVSWS +IAR+ Q G
Sbjct: 306 AHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLDAMPERNEVSWSTLIARHEQKGDS 365
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EA +L+ QM +PN SCFS VLSA A+L LR G +HA+ LK+G +F+S++L
Sbjct: 366 AEALKLYSQMLAEGCRPNISCFSSVLSACATLHDLRGGTRIHANALKMGFSSSLFVSSSL 425
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
ID+Y KC + D + +F+S+ EK+ V WNS+I GY NG+M EA+ELF MP RN
Sbjct: 426 IDMYCKCKQCTDAQRIFNSLPEKNT---VCWNSLISGYSWNGKMVEAEELFKKMPARNAA 482
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW+ +ISGY E+++F F ML SG+IP + T SSVL A A++ SLE GK +H +I
Sbjct: 483 SWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSVLLACANLCSLEMGKMVHAEI 542
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+KLG ++F+GTAL+D YAKSGD++SSRR+F +MP+KN I+WT MV+GLAE+G+A+ESI
Sbjct: 543 VKLGIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMPEKNNITWTAMVQGLAENGFAEESI 602
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LFE M I PNE T L++LFACSH GLV++ + YF +M+ + I P +HYTC+VD+
Sbjct: 603 LLFENMIANRIAPNEHTFLAILFACSHCGLVEQAIHYFETMQ-AHGIPPKDKHYTCMVDV 661
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+R+GRL EAE+ + +P + D+++W+SLLS C TY+N++I ERA K L +L +++ AGY
Sbjct: 662 LARAGRLPEAEELLMKVPSKLDTSSWSSLLSACNTYRNKEIGERAAKKLHELEKDNTAGY 721
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
VLLSN+YAS G+W DA R LM L+K
Sbjct: 722 VLLSNMYASCGKWKDAAETRILMQGPRLKK 751
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/755 (33%), Positives = 409/755 (54%), Gaps = 78/755 (10%)
Query: 17 FNSYIETCLCLLKDITSQNLVIQGRALHGH------LIKTGIHKERYLTTRLLIMYLGSR 70
FN I+ +D+ S N +I G + +G L + K T LL Y
Sbjct: 194 FNEMIQ------RDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEG 247
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ EA E+ + + ++V N MI+ +Q G+L+ A++LFD MPE+N SW ++++G+
Sbjct: 248 RIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCH 307
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
R+ E+ F++ P +N +SW I G+V +EA +F+K+ + +P++ F +
Sbjct: 308 CYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVV 367
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
A ++D L S+ + K G+E V V ++++ + G +DLA F+ M +R+
Sbjct: 368 LSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNE 427
Query: 251 VSWTVILDVFIEMGDLGE-------------------------------ARRIFDEMPER 279
SWT ++ F + G L + AR IFDE+
Sbjct: 428 YSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNP 487
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMT------------------------------- 308
N V+W+ +IA Y Q+G +EA LF++M
Sbjct: 488 NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
R P+ S F+ LSA A++ + G +H+ +K G + + ++ N LI +Y+KCG +
Sbjct: 548 RSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVE 607
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
DG VF +I KD VSWNS+I G N +++A+ +F+ MPKR+ VSW+AIIS Y++
Sbjct: 608 DGSHVFRTIRVKD---TVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQ 664
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
++ +F +ML G PN+ T +S+L A ++ +++ G+ H I KLGF +F+
Sbjct: 665 AGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFV 724
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G +L Y K G E VF+ MP+ + I+W ++ G A++G KE+I +FE+ME I
Sbjct: 725 GNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGI 783
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P++++ L VL ACSH+GLVD+G +FNSM Y I P HYTC+VD+L R+G LSEAE
Sbjct: 784 LPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAE 843
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
I +MP +PDS W +LL C+ ++N ++ +R + L+++ + A YVLLSN++AS G
Sbjct: 844 ALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQG 903
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
W +RKLM ++GL K G SW++V+N++H F
Sbjct: 904 MWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCF 938
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 273/564 (48%), Gaps = 129/564 (22%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G +EEA+R+F+ M +R+ VSW ++I+G+ ++G+V+E+ F+ +N+ +WT + G+
Sbjct: 185 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYA 244
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ G EA + +F++ E++V
Sbjct: 245 KEGRIEEARE---------------------------------------VFESMTERNVV 265
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
N++I+ ++ G++ AR +FD M +++V SW ++ + + EAR +FD+MPERN
Sbjct: 266 SWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERN 325
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW VMI+ Y EA+ +F +M R +P+ S F +VLSA+ L L +
Sbjct: 326 SVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRP 385
Query: 341 HVLKIGIEKDVFISNALIDLYSK-------------------------------CGETKD 369
+K G E DV + +A+++ Y++ CG D
Sbjct: 386 IAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDD 445
Query: 370 GRLVFDSIVEKDVA----------------------------HVVSWNSMIGGYGLNGQM 401
+++ + E+ VA +VV+WN++I GY NG +
Sbjct: 446 AIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGML 505
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+EAK+LF MP +N SW+A+I+G++++++ + E+ SG +P+ S+F+S L A
Sbjct: 506 KEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSAC 565
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE------------------ 503
A++ +E G+ +H IK G ++ ++ L YAK G++E
Sbjct: 566 ANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWN 625
Query: 504 -------------SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
+R VF++MP ++ +SWT ++ ++G+ + +++LF +M I P
Sbjct: 626 SLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKP 685
Query: 551 NELTILSVLFACSHSGLVDKGLKY 574
N+LT+ S+L AC + G + G ++
Sbjct: 686 NQLTVTSLLSACGNLGAIKLGEQF 709
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 231/452 (51%), Gaps = 58/452 (12%)
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ H+ CN+ I ++G V+ AR VF+ M +RDVVSW +++ + + G + EAR +FD
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDA 227
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+N +W++++ Y + G EEA +F MT
Sbjct: 228 FVGKNIRTWTILLTGYAKEGRIEEAREVFESMT--------------------------- 260
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
E++V NA+I Y + G+ K+ R +FD + EK+VA SWNS++ GY
Sbjct: 261 ------------ERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA---SWNSVVTGY 305
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+M EA+ELFD MP+RN VSW +ISGY+ + + VF +M + P++S F
Sbjct: 306 CHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFV 365
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
VL A + LE L IK G+ DV +G+A+ + Y ++G ++ + F+ MP++
Sbjct: 366 VVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER 425
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
NE SWT M+ A+ G ++I L+E + + ++ T +++ A + G + K F
Sbjct: 426 NEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIF 481
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
+ + + PN + ++ +++G L EA+D MP + +S +WA++++G +N
Sbjct: 482 DEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASWAAMIAG--FVQN 533
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
E+ E L L E H +G V + + SA
Sbjct: 534 EESREA----LELLIELHRSGSVPSDSSFTSA 561
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 181/447 (40%), Gaps = 107/447 (23%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
S+ ++SF S + C +I + GR +H IKTG Y+ L+ MY
Sbjct: 551 SVPSDSSFTSALSAC----ANIGDVEI---GRVIHSLAIKTGCQFNSYVMNGLISMYAKC 603
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+ + + + + D V N +I+ + L++A+ +F+ MP+R+ VSWTA+IS
Sbjct: 604 GNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIIS--- 660
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+VQ G AL LFL +L G+KPN++T +S
Sbjct: 661 ----------------------------AYVQAGHGEVALDLFLDMLARGIKPNQLTVTS 692
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ AC + +LG LIFK GF+ + V NSLIT+ K G D VF+ M + D
Sbjct: 693 LLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFCVFEEMPEHD 751
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+++W +L +G A Q+G +EA ++F QM
Sbjct: 752 LITWNAVL--------VGCA-----------------------QNGLGKEAIKIFEQMEV 780
Query: 310 YSFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
P+ F VL A + + G H ++ K GI V+ ++DL
Sbjct: 781 EGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDL-------- 832
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYL 427
G G + EA+ L +NMP + D V W A++
Sbjct: 833 --------------------------LGRAGYLSEAEALIENMPVKPDSVIWEALLGACR 866
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTF 454
H+ +L V E L P +T+
Sbjct: 867 IHRNVELGQRV-AERLFQMTKPKSATY 892
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 150/325 (46%), Gaps = 50/325 (15%)
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
E H+ N+ I G G++EEA+ +F+ M +R+ VSW+++I+GY ++ + D +
Sbjct: 165 ETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLL 224
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F+ + N T++ +L A +E+ +++ + + +V A+ Y +
Sbjct: 225 FDAFVGK----NIRTWTILLTGYAKEGRIEEAREVFESMTE----RNVVSWNAMISGYVQ 276
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAE--------------------------SGY 532
+GD++++R++FD MP+KN SW +V G SGY
Sbjct: 277 NGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGY 336
Query: 533 AK-----ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI---YNI 584
E+ ++F +M +T P++ + VL A +GL D L+ S+ PI
Sbjct: 337 VHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI--TGLDD--LELIGSLRPIAIKTGY 392
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + + +++ +R+G L A F +MP E + +W ++++ + + A++
Sbjct: 393 EGDVVVGSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAA---FAQCGRLDDAIQ 448
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGR 669
++ E+ A + YA GR
Sbjct: 449 LYERVPEQTVATKTAMMTAYAQVGR 473
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/668 (34%), Positives = 377/668 (56%), Gaps = 32/668 (4%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GRA+H H +K G+ YL LL Y + +
Sbjct: 228 GRAIHAHAVKAGLLVSTYLCNNLLAYY---------------------------ASVGVS 260
Query: 100 WGNLEEAQRLFDGMP--ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
G EA+ LFD +P RN +W +L+S + K GR+ ++ F P ++ +SWT I
Sbjct: 261 RGCFREARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIV 320
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G ++G ++A+K FL ++ G P++ T +++ +CA + +G V + K G
Sbjct: 321 GLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSS 380
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V NS++ + K G+ + AR+VF+RM+ R V SW V++ ++ G + A +F+ M
Sbjct: 381 CVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMV 440
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
ER+ VSW+ +IA YNQ+G A + F R ++ S +P+ + VLSA A+L+ L+ G
Sbjct: 441 ERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGK 500
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H+++L+ G+ I NALI Y+K G + R + D V D+ +V+S+ +++ GY
Sbjct: 501 QMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADL-NVISFTALLEGYV 559
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
G ++A+E+FD M R+ ++W+A+I GY ++ Q D +F M+L G PN T ++
Sbjct: 560 KLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAA 619
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL A AS+A L+ GK +H K I+ V + A+ YA+SG + +RRVFD++ +
Sbjct: 620 VLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRK 679
Query: 517 E-ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
E I+WT M+ +A+ G ++++ LFEEM + + P+ +T + VL AC+H+G VDKG +Y+
Sbjct: 680 ETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYY 739
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
M+ + I P HY C+VD+ +R+G L+EA +FI MP PD+ W SLL+ C+ KN
Sbjct: 740 EQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKN 799
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+AE A L + + Y L+N+Y++ GRW DA + KL +KG++K G SW
Sbjct: 800 ADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTH 859
Query: 696 VRNQVHFF 703
VR +VH F
Sbjct: 860 VRGKVHVF 867
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/666 (34%), Positives = 373/666 (56%), Gaps = 34/666 (5%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR++H +IK G+H YL L+ Y +
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKT------------------------------ 58
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+L A +FD MP ++ SW LISG+ K G E S P + +SWTA I G+
Sbjct: 59 -GSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
Q G A+ +F K++ V P++ T S++ +CA +G + + K G V
Sbjct: 118 NQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V SL+ + K G+ +A+ VFDRM +++ +W ++ ++++ G A F++MP+R
Sbjct: 178 PVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+ VSW+ MI+ Y+Q GY EA +F +M S KP+ + +LSA A+L+ L G +
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HA++L+ E + NALI +Y+K G + RL+ + ++ +++++ S++ GY
Sbjct: 298 HAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL-NIIAFTSLLDGYTKL 356
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G ++ A+E+F+ + R+ V+W+A+I GY+++ ++ +F M+ G PN T +++L
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
S+S+ LE GK +H IK G + AL YAK+G+I ++RVFD K EI
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEI 476
Query: 519 -SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
SWT M+ LA+ G KE+INLFE M + P+ +T + VL AC+H GLV++G KY+N
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNM 536
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M ++ I+P HY C++D+ R+G L EA FI SMP EPD+ AW SLL+ CK +KN
Sbjct: 537 MTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNAD 596
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVR 697
+A+ A + L + + Y+ L+N+Y++ G+W +A RKLM ++G+RK G SW+ ++
Sbjct: 597 LAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIK 656
Query: 698 NQVHFF 703
N+VH F
Sbjct: 657 NEVHAF 662
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 263/564 (46%), Gaps = 74/564 (13%)
Query: 176 LESGVKPNEVTF-SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+E G P F + I + I D G SV I K G V + N+L+T K G
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ A VFD M + SW ++ + + G+ +RR+ EMP+ + VSW+ +I YNQ
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G + A +F +M P+ S VLS+ A+ + L G +H+ V+K+G+ V ++
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+++Y+KCG+ ++VFD + K+++ +WN++I Y +GQ E A F+ MP R
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNIS---TWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDL 473
+ VSW+++ISGY + A+F++ML + P+ T +S+L A A++ L GK +
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIE------------------------------ 503
H I++ +G AL YAKSG +E
Sbjct: 298 HAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLG 357
Query: 504 ---SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+R +F+++ D++ ++WT M+ G ++G +++ LF M PN T+ ++L
Sbjct: 358 NVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLS 417
Query: 561 ACSHSGLVDKGLKYF---------------NSMEPIY----NIK--------PNGRH--- 590
S +++ G + N++ +Y NI PNG+
Sbjct: 418 VSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIV 477
Query: 591 -YTCVVDMLSRSGRLSEAEDFIN---SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+T ++ L++ G EA + S+ +PD + +LS C + + +
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537
Query: 647 WKLAEEHP--AGYVLLSNIYASAG 668
++ E P + Y + ++Y AG
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAG 561
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 99/288 (34%), Gaps = 100/288 (34%)
Query: 5 LRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
R + + PE NSY T +L +S ++ G+ +H IK G +T L+
Sbjct: 397 FRLMVNEGPEP--NSY--TLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIA 452
Query: 65 MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP--ERNEVSWT 122
MY + GN+ A+R+FD +P ++ VSWT
Sbjct: 453 MYAKT-------------------------------GNINVAKRVFD-LPNGKKEIVSWT 480
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
++I +H G EA+ LF ++L G+KP
Sbjct: 481 SMIMALAQH-------------------------------GLGKEAINLFERMLSVGMKP 509
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +T+ + AC + G + + M EV
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNM----------------------MTEVHEIEPTL 547
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIA 289
+ ++D++ G L EA + MP E + ++W ++A
Sbjct: 548 SH--------YACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA 587
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/666 (34%), Positives = 373/666 (56%), Gaps = 34/666 (5%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR++H +IK G+H YL L+ Y +
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKT------------------------------ 58
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+L A +FD MP ++ SW LISG+ K G E S P + +SWTA I G+
Sbjct: 59 -GSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
Q G A+ +F K++ V P++ T S++ +CA +G + + K G V
Sbjct: 118 NQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V SL+ + K G+ +A+ VFDRM +++ +W ++ ++++ G A F++MP+R
Sbjct: 178 PVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+ VSW+ MI+ Y+Q GY EA +F +M S KP+ + +LSA A+L+ L G +
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HA++L+ E + NALI +Y+K G + RL+ + ++ +++++ S++ GY
Sbjct: 298 HAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL-NIIAFTSLLDGYTKL 356
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G ++ A+E+F+ + R+ V+W+A+I GY+++ ++ +F M+ G PN T +++L
Sbjct: 357 GNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAML 416
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
S+S+ LE GK +H IK G + AL YAK+G+I ++RVFD K EI
Sbjct: 417 SVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEI 476
Query: 519 -SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
SWT M+ LA+ G KE+INLFE M + P+ +T + VL AC+H GLV++G KY+N
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNM 536
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M ++ I+P HY C++D+ R+G L EA FI SMP EPD+ AW SLL+ CK +KN
Sbjct: 537 MTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNAD 596
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVR 697
+A+ A + L + + Y+ L+N+Y++ G+W +A RKLM ++G+RK G SW+ ++
Sbjct: 597 LAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIK 656
Query: 698 NQVHFF 703
N+VH F
Sbjct: 657 NEVHAF 662
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 262/564 (46%), Gaps = 74/564 (13%)
Query: 176 LESGVKPNEVTF-SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+E G P F + I + I D G SV I K G V + N+L+T K G
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ A VFD M + SW ++ + + G+ +RR+ EMP+ + VSW+ +I YNQ
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G + A +F +M P+ S VLS+ A+ + L G +H+ V+K+G+ V ++
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+++Y+KCG+ ++VFD + K+++ +WN++I Y +GQ E A F+ MP R
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNIS---TWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDL 473
+ VSW+++ISGY + +F++ML + P+ T +S+L A A++ L GK +
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIE------------------------------ 503
H I++ +G AL YAKSG +E
Sbjct: 298 HAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLG 357
Query: 504 ---SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+R +F+++ D++ ++WT M+ G ++G +++ LF M PN T+ ++L
Sbjct: 358 NVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLS 417
Query: 561 ACSHSGLVDKGLKYF---------------NSMEPIY----NIK--------PNGRH--- 590
S +++ G + N++ +Y NI PNG+
Sbjct: 418 VSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIV 477
Query: 591 -YTCVVDMLSRSGRLSEAEDFIN---SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+T ++ L++ G EA + S+ +PD + +LS C + + +
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537
Query: 647 WKLAEEHP--AGYVLLSNIYASAG 668
++ E P + Y + ++Y AG
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAG 561
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 99/288 (34%), Gaps = 100/288 (34%)
Query: 5 LRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
R + + PE NSY T +L +S ++ G+ +H IK G +T L+
Sbjct: 397 FRLMVNEGPEP--NSY--TLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIA 452
Query: 65 MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP--ERNEVSWT 122
MY + GN+ A+R+FD +P ++ VSWT
Sbjct: 453 MYAKT-------------------------------GNINVAKRVFD-LPNGKKEIVSWT 480
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
++I +H G EA+ LF ++L G+KP
Sbjct: 481 SMIMALAQH-------------------------------GLGKEAINLFERMLSVGMKP 509
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +T+ + AC + G + + M EV
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNM----------------------MTEVHEIEPTL 547
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIA 289
+ ++D++ G L EA + MP E + ++W ++A
Sbjct: 548 SH--------YACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA 587
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/668 (34%), Positives = 376/668 (56%), Gaps = 32/668 (4%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GRA+H H +K G+ YL LL Y A +
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYY---------------------------ARAGVG 76
Query: 100 WGNLEEAQRLFDGMP--ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
G EA+RLFD +P RN +W +L+S + K GR+ ++ F + P ++ +SWT +
Sbjct: 77 RGCFHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVV 136
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G + G ++A+K FL ++ G+ P++ +++ +CA +G V + K G
Sbjct: 137 GLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSS 196
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V NS++ + K G+ + AR+VF+RM+ R SW ++ ++ G + A +F+ M
Sbjct: 197 CVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENME 256
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
ER+ VSW+ +IA YNQ+G + A + F R +T S +P+ + VLSA A+L+ L+ G
Sbjct: 257 ERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGK 316
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H+++L+ G+ I NALI Y+K G + R + D V D+ +V+S+ +++ GY
Sbjct: 317 QMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADL-NVISFTALLEGYV 375
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
G ++A+E+FD M R+ ++W+A+I GY ++ Q D +F M+ SG PN T ++
Sbjct: 376 KLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAA 435
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL A AS+A L GK +H + I+ V + A+ YA+SG + +RRVFD++ +
Sbjct: 436 VLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRK 495
Query: 517 E-ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
E ++WT M+ LA+ G +++I LFEEM + + P+ +T + V AC+H+G +DKG +Y+
Sbjct: 496 ETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYY 555
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
M + I P HY C+VD+L+R+G L+EA +FI MP PD+ W SLL+ C+ KN
Sbjct: 556 EQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKN 615
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+AE A + L + ++ Y L+N+Y++ GRW DA + KL +K ++K G SW
Sbjct: 616 ADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTH 675
Query: 696 VRNQVHFF 703
V+++VH F
Sbjct: 676 VQSKVHVF 683
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/668 (34%), Positives = 372/668 (55%), Gaps = 32/668 (4%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GRA+H +K G+ YL LL Y +
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGA-------------------------- 78
Query: 100 WGNLEEAQRLFDGMP--ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
G L +A+RLFD +P RN +W +L+S F K GR+ ++ F P ++ +SWT +
Sbjct: 79 -GGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVV 137
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G + G EA+K L + G P + T +++ +CA +G V + K G
Sbjct: 138 GLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGS 197
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V NS++ + K G+ + A +VF+RM R V SW ++ + +G + A +F+ MP
Sbjct: 198 CVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
+R+ VSW+ MIA YNQ+G +A +LF R + S P+ + VLSA A+L +R G
Sbjct: 258 DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 317
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VHA++L+ + + ++NALI Y+K G ++ R + D +E D+ +V+S+ +++ GY
Sbjct: 318 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL-NVISFTALLEGYV 376
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
G ME A+E+F M R+ V+W+A+I GY ++ + D +F M+ G PN T ++
Sbjct: 377 KIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAA 436
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL AS+A L+ GK +H + I+ + A+ YA+SG +RR+FD++ +
Sbjct: 437 VLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRK 496
Query: 517 E-ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
E I+WT M+ LA+ G +E++ LFEEM + + P+ +T + VL ACSH+G V++G +Y+
Sbjct: 497 ETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYY 556
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
+ ++ + I P HY C+VD+L+R+G SEA++FI MP EPD+ AW SLLS C+ +KN
Sbjct: 557 DQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKN 616
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
++AE A + L + + Y ++N+Y++ GRW DA + K EK +RK G SW
Sbjct: 617 AELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTH 676
Query: 696 VRNQVHFF 703
+R+++H F
Sbjct: 677 IRSKIHVF 684
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/668 (34%), Positives = 371/668 (55%), Gaps = 32/668 (4%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GRA+H +K G+ YL LL Y +
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGA-------------------------- 78
Query: 100 WGNLEEAQRLFDGMP--ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
G L +A+RLFD +P RN +W +L+S F K GR+ ++ F P ++ +SWT +
Sbjct: 79 -GGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVV 137
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G + G EA+K L + G P + T +++ +CA +G V + K G
Sbjct: 138 GLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGS 197
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V NS++ + K G+ + A +VF+RM R V SW ++ + +G + A +F+ MP
Sbjct: 198 CVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
R+ VSW+ MIA YNQ+G +A +LF R + S P+ + VLSA A+L +R G
Sbjct: 258 GRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 317
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VHA++L+ + + ++NALI Y+K G ++ R + D +E D+ +V+S+ +++ GY
Sbjct: 318 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL-NVISFTALLEGYV 376
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
G ME A+E+F M R+ V+W+A+I GY ++ + D +F M+ G PN T ++
Sbjct: 377 KIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAA 436
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL AS+A L+ GK +H + I+ + A+ YA+SG +RR+FD++ +
Sbjct: 437 VLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRK 496
Query: 517 E-ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
E I+WT M+ LA+ G +E++ LFEEM + + P+ +T + VL ACSH+G V++G +Y+
Sbjct: 497 ETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYY 556
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
+ ++ + I P HY C+VD+L+R+G SEA++FI MP EPD+ AW SLLS C+ +KN
Sbjct: 557 DQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKN 616
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
++AE A + L + + Y ++N+Y++ GRW DA + K EK +RK G SW
Sbjct: 617 AELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTH 676
Query: 696 VRNQVHFF 703
+R+++H F
Sbjct: 677 IRSKIHVF 684
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/630 (34%), Positives = 370/630 (58%), Gaps = 3/630 (0%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + + N ++N + G A++LFD MP R SW ++S + K G ++ S +F+R
Sbjct: 47 FSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRL 106
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++ +SWT I G+ G +A+++ +++ G++P++ T +++ + A G
Sbjct: 107 PQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGK 166
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V I K G +VSV NSL+ + K G+ +A+ VFDRM +D+ SW ++ + +++G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVG 226
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVL 323
+ A F++M ER+ V+W+ MI+ YNQ GY A +F +M R S P+ + VL
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVL 286
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA A+L+ L G +H+H++ G + + NALI +YS+CG + R + + KD+
Sbjct: 287 SACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+ + +++ GY G M EAK +FD++ R+ V+W+A+I GY +H + +F M+
Sbjct: 347 -IEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMV 405
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+ PN T +++L ++S+ASL GK +HG +K G Y V + AL YAK+G I
Sbjct: 406 GEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSIT 465
Query: 504 SSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
S+ R FD + +++ +SWT M+ LA+ G+A+E++ LFE M + P+ +T + V AC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+H+GLV++G +YF+ M+ + I P HY C+VD+ R+G L EA++FI MP EPD
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W SLLS C+ YKN + + A + L L E+ Y L+N+Y++ G+W +A +RK M +
Sbjct: 586 WGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K G SW+EV+++VH F + +P+
Sbjct: 646 GRVKKEQGFSWIEVKHKVHAFGVEDGIHPQ 675
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 155/598 (25%), Positives = 254/598 (42%), Gaps = 116/598 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L + + + G+ +H ++K G+ ++ LL MY + A + + D
Sbjct: 152 VLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKD 211
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ N MI ++Q G ++ A F+ M ER+ V+W ++ISG+
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYN----------------- 254
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLS 205
Q G+ AL +F K+L +S + P+ T +S+ ACA + +G
Sbjct: 255 --------------QRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQ 300
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD--VVSWTVILDVFIEM 263
+ I GF+ V N+LI++ + G V+ AR + ++ +D + +T +LD +I++
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
GD+ EA+ IFD + +R+ V+W+ MI Y Q G EA LFR M +PN+ + +L
Sbjct: 361 GDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAML 420
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDV 382
S +SL +L G +H +K G V +SNALI +Y+K G FD I E+D
Sbjct: 421 SVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERD- 479
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VSW SMI +G EEA ELF+ M
Sbjct: 480 --TVSWTSMIIALAQHGHAEEALELFET-------------------------------M 506
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L+ G P+ T+ V A +G +
Sbjct: 507 LMEGLRPDHITYVGVFSAC-----------------------------------THAGLV 531
Query: 503 ESSRRVFDRMPDKNEI-----SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
R+ FD M D ++I + MV +G +E+ E+M I P+ +T S
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGS 588
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKP-NGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L AC +D G + E + ++P N Y+ + ++ S G+ EA SM
Sbjct: 589 LLSACRVYKNIDLGKV---AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 184/389 (47%), Gaps = 75/389 (19%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
VH V+K G+ V++ N L+++YSK G R +FD E + SWN+++ Y
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFD---EMPLRTAFSWNTVLSAYAK 92
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
G M+ + E FD +P+R+ VSW+ +I GY Q+ + EM+ G P++ T ++V
Sbjct: 93 RGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNV 152
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR------ 511
L + A+ LE GK +H I+KLG +V + +L + YAK GD ++ VFDR
Sbjct: 153 LASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDI 212
Query: 512 -------------------------MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
M +++ ++W M+ G + GY ++++F +M +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRD 272
Query: 547 S-ITPNELTILSVLFACS-----------HSGLVDKGLK----YFNSMEPIYN------- 583
S ++P+ T+ SVL AC+ HS +V G N++ +Y+
Sbjct: 273 SMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 584 ----IKPNGRH------YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
I+ G +T ++D + G ++EA++ +S+ + D AW +++ G Y
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLK-DRDVVAWTAMIVG---Y 388
Query: 634 KNEQIAERAVKNLWKLA---EEHPAGYVL 659
+ + A+ NL++ E+ P Y L
Sbjct: 389 EQHGLYGEAI-NLFRSMVGEEQRPNSYTL 416
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 122/307 (39%), Gaps = 78/307 (25%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR 70
+ E NSY T +L +S + G+ +HG +K+G
Sbjct: 405 VGEEQRPNSY--TLAAMLSVASSLASLGHGKQIHGSAVKSG------------------- 443
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP-ERNEVSWTALISGFM 129
EI + + V N +I + G++ A R FD + ER+ VSWT++I
Sbjct: 444 ------EI------YSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALA 491
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+HG E EAL+LF +L G++P+ +T+
Sbjct: 492 QHGHAE-------------------------------EALELFETMLMEGLRPDHITYVG 520
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN---SLITLSLKMGEVDLARSVFDRME 246
+ AC G F ++ +K + + ++ L + G + A+ ++M
Sbjct: 521 VFSACTHAGLVNQGRQYFDMM--KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP 578
Query: 247 -KRDVVSWTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ DVV+W +L I++G + R + E PE N ++S + Y+ G EEA
Sbjct: 579 IEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLE-PE-NSGAYSALANLYSACGKWEEA 636
Query: 301 FRLFRQM 307
++ + M
Sbjct: 637 AKIRKSM 643
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/709 (33%), Positives = 386/709 (54%), Gaps = 33/709 (4%)
Query: 1 MKASLRSLFSINPETSFNSYIET--CLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL 58
M+ + L + P T+ + ++ C LL+ + GRA+H +K G+ YL
Sbjct: 1 MQDAALGLHAGAPRTAMAAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYL 60
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP--ER 116
LL Y G EA+RLFD +P +R
Sbjct: 61 CNNLLSYYAGPAAGGGGG--------------------------FREARRLFDEIPAAQR 94
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N +W +L+S + K GR+ ++ F P ++ +SWT + G + G EA+K+FL ++
Sbjct: 95 NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
G+ P + T +++ +CA +G V + K G V V NS++ + K G+ +
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
AR+VF+RM +R V SW ++ + +G + A +F+ MP+R VSW+ +IA YNQ+G
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL 274
Query: 297 PEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
+A F +M YS P+ + VLSA A+L + G VHA++L+ + ++N
Sbjct: 275 NAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
ALI +Y+K G ++ R V V D+ +V+S+ +++ GY G M+ A+E+FD M R+
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADL-NVISFTALLEGYVKLGDMKHAREMFDVMSNRD 393
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
V+W+A+I GY ++ D +F M+ SG PN T ++VL AS+A LE GK +H
Sbjct: 394 VVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHC 453
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAESGYAK 534
K I+ + ++ YA+SG + +RRVFDR+ + E ++WT M+ LA+ G +
Sbjct: 454 KAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGE 513
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
+++ LFEEM + + P+ +T + VL AC+H G VD+G +YF ++ + I P HY C+
Sbjct: 514 DAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACM 573
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L+R+G SEA++FI MP EPD+ AW SLLS C+ +KN +AE A + L + +
Sbjct: 574 VDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNS 633
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
Y LSN+Y++ GRW DA + K +K ++K G SW + N+VH F
Sbjct: 634 GAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVF 682
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/680 (33%), Positives = 379/680 (55%), Gaps = 72/680 (10%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
R++HG LI+T +E ++ RL+ +Y +
Sbjct: 43 ARSVHGRLIQTPFCEEVFIQNRLIDVYG-------------------------------K 71
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G L+ A+++FD M ERN S+ ++IS M+ G V+ES W F P ++ SW + I GF
Sbjct: 72 CGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGF 131
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
Q+ EAL F+++ N+ +F S AC+ + D +LG + GLI K+ +
Sbjct: 132 AQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKY---- 187
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+L + MG + ++D + + G +G ARR+FD M E+
Sbjct: 188 -------SLDVFMG--------------------SGLIDFYSKCGLVGCARRVFDGMEEK 220
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N VSW+ +I Y Q+G EA F +MT FKP+ + V+SA A+L A + G+ +H
Sbjct: 221 NVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIH 280
Query: 340 AHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
A V+K D+ + NAL+D+Y+KCG + R VFD + V + VS +M+ GY +
Sbjct: 281 ARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM---PVRNAVSETTMVSGYAKS 337
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
++ A+ +F + +++ VSW+A+I+GY ++ + + +F + P TF ++L
Sbjct: 338 ASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLL 397
Query: 459 CASASVASLEKGKDLHGKIIKLGFPY------DVFLGTALTDTYAKSGDIESSRRVFDRM 512
ASA++A LE G+ H ++K GF + D+F+G +L D Y K G +E RVF+ M
Sbjct: 398 NASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM 457
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
+K+ +SW M+ G A++GY E++ LF++M ++ P+ +T++ L ACSH+GLV++G
Sbjct: 458 VEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGR 517
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
+YF SM + + P HYTC+VD+L R+G L EA+D I SMP +PD+ W+SLLS CK
Sbjct: 518 RYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKV 577
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
++N + + + ++++ YVLL+N+Y+ GRW DA++VRKLM +G+ K GCS
Sbjct: 578 HRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCS 637
Query: 693 WVEVRNQVHFFFQKTDHNPK 712
W+++++ VH F K +P+
Sbjct: 638 WIDIQSNVHVFMVKDKRHPQ 657
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 240/526 (45%), Gaps = 89/526 (16%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F+ + C ++ R SV G + + F + V + N LI + K G +D AR VFDRM
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+R+V S+ I+ + G + E+ +F MPE+++ SW+ MIA + Q EEA F +
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R F N F LSA + LK L+ G +H + K DVF+ + LID YSKCG
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
R VFD + EK+ VVSWN +I Y NG EA E F M +
Sbjct: 207 VGCARRVFDGMEEKN---VVSWNCLITCYEQNGPAIEALEAFGRMTEL------------ 251
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYD 485
G P++ T +SV+ A A++A+ ++G +H +++K F D
Sbjct: 252 -------------------GFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRND 292
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES--------------- 530
+ LG AL D YAK G + +R VFDRMP +N +S T MV G A+S
Sbjct: 293 LILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQ 352
Query: 531 -----------GYAK-----ESINLFEEMEKTSITPNELTILSVLFAC-----------S 563
GY + E++ LF +++ S+ P T ++L A +
Sbjct: 353 KDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQA 412
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
HS +V G ++ + EP + + ++DM + G + E +M E D +W
Sbjct: 413 HSHVVKHGFRFQSGEEPDIFVGNS------LIDMYMKCGSVEEGLRVFENM-VEKDHVSW 465
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAE--EHPAGYVLLSNIYASA 667
+++ G Y A++ K+ E E P ++ + A +
Sbjct: 466 NTMIIG---YAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS 508
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 164/304 (53%), Gaps = 3/304 (0%)
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
F ++S F+ +L L++ R VH +++ ++VFI N LID+Y KCG R
Sbjct: 20 FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD + E++ V S+NS+I G ++E+ LF MP+++ SW+++I+G+ +H +
Sbjct: 80 KVFDRMSERN---VFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDR 136
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
F+ F M + N +F S L A + + L+ G +HG I K + DVF+G+
Sbjct: 137 FEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSG 196
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D Y+K G + +RRVFD M +KN +SW ++ ++G A E++ F M + P+
Sbjct: 197 LIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPD 256
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
E+T+ SV+ AC+ +G++ + + + +VDM ++ GR++EA
Sbjct: 257 EVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVF 316
Query: 612 NSMP 615
+ MP
Sbjct: 317 DRMP 320
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 159/406 (39%), Gaps = 107/406 (26%)
Query: 39 QGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+G +H ++K+ + L L+ MY + EA + + + V M++
Sbjct: 275 EGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGY 334
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
+ +++ A+ +F + +++ VSW ALI+G
Sbjct: 335 AKSASVKAARSMFATIKQKDIVSWNALIAG------------------------------ 364
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV------FGLIF 211
+ QNG + EAL LF L V P TF ++ A A + D LG G F
Sbjct: 365 -YTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRF 423
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
++G E + V NSLI + +K G V+ VF+ M ++D VSW
Sbjct: 424 QSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSW------------------ 465
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+ MI Y Q+GY EA LF++M KP+
Sbjct: 466 -------------NTMIIGYAQNGYGMEALELFQKMLESGEKPD---------------- 496
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS--WN 389
HV IG + S G ++GR F S+ ++ V +
Sbjct: 497 ---------HVTMIGT----------LCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYT 537
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDL 434
M+ G G +EEAK+L ++MPK+ D V WS+++S H+ L
Sbjct: 538 CMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITL 583
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/692 (34%), Positives = 379/692 (54%), Gaps = 36/692 (5%)
Query: 5 LRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
LR+ F+ N +T + Y T + LK +S + QG+ +H + K+G+ ++ L+
Sbjct: 36 LRAFFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLIS 95
Query: 65 MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTAL 124
Y+ R + A+ LFD + VS +
Sbjct: 96 FYVKCRL-------------------------------ISNARSLFDTCSVLDPVSCNIM 124
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
++G++K G ++ + FE+ P + +S+T + G QN EA+ +F + +GV PNE
Sbjct: 125 LAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNE 184
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
VT +S+ A + + + L FK G E V +L+ + + AR +FD
Sbjct: 185 VTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDE 244
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
+ +R+VV+W V+L+ + + G + AR +F+ +P ++ VSW +I Y Q EA R++
Sbjct: 245 IPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMY 304
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
R M R PN ++SA A+ G H +++ G + FI +I Y+ C
Sbjct: 305 RSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAAC 364
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
GE L F+ + KD HV SWN++I G+ NG +E+A++LFD MP+R+ SWS++IS
Sbjct: 365 GEINLAFLQFE-LGSKD--HVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMIS 421
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
GY +++Q DL +F+EM+ G PN+ T SV A A++ +L +G+ H I+ P
Sbjct: 422 GYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPL 481
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEIS-WTVMVRGLAESGYAKESINLFEE 542
+ L AL D YAK G I + ++F + D+ + +S W ++ GLA G+A S+ LF +
Sbjct: 482 NDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQ 541
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
+++ I PN +T + VL AC H+GLVD G KYF M+ +YNI+PN +HY C++D+L R+G
Sbjct: 542 LQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAG 601
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
RL EA + I MP + D W +LL+ C+T+ N +I ERA +NL KL H AG VLLSN
Sbjct: 602 RLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSN 661
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
IYA AGRW DA VR+ M + ++KS GCS V
Sbjct: 662 IYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 693
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/585 (37%), Positives = 343/585 (58%), Gaps = 53/585 (9%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+S ++K G + E+ F+ P +NV+SWTA I + ++ EAL F ++ + G++PN
Sbjct: 106 LVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPN 165
Query: 184 EVTFSSICKACAEINDFRLGLSVFGL----IFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
TF+SI AC + L V G I K GFE +V V N L+ + K G ++ AR
Sbjct: 166 HFTFASILPACTD-------LEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFAR 218
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+FD+M +RDVVSW ++ +++ G + +A ++F E+P+R+ ++W+ M+A Y Q G E
Sbjct: 219 ELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVEN 278
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A LF +M E+++ N +I
Sbjct: 279 AVELFEKMP---------------------------------------EQNLVSWNTMIA 299
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
Y + G K+ +F + E++V +SWN++I G+ NGQ+EEA +LF MP+ N VSW
Sbjct: 300 GYVQNGSVKEAFKLFQIMPERNV---ISWNAVISGFAQNGQVEEALKLFKTMPECNVVSW 356
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+A+I+GY ++ Q + +F +M + PN TF+ VL A A++A LE+G + H +I+
Sbjct: 357 NAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIR 416
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
GF DV +G L YAK G IE +R+VFDRM ++ S + M+ G A +G +KES+ L
Sbjct: 417 SGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLEL 476
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
FE+M+ T + P+ +T + VL AC H+GLVD+G +YF+ M Y+I P HY C++D+L
Sbjct: 477 FEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLG 536
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G EA D IN MP +PD++ W SLLS C+T+ N + E+ ++L L ++PA YVL
Sbjct: 537 RAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVL 596
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
LSNIYA+AGRW D +VR M ++ ++K GCSW+ ++ QVH F
Sbjct: 597 LSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFL 641
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 214/404 (52%), Gaps = 23/404 (5%)
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
LK E K N+ S+CK R L + + + G H S +SL+ L
Sbjct: 22 LKTKEGTGKGNDGLVKSLCKQ----GRLREALHILQDMVENGIWPHSSTYDSLLQGCLNA 77
Query: 233 GEVDLARSVFDRM-----EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ A+ + M E +D+ ++ +++++G L EARR+FDEMP +N VSW+ M
Sbjct: 78 KSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAM 137
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y + + +EA F +M +PN F+ +L A L+ L H ++K G
Sbjct: 138 IAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGF 194
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E +VF+ N L+D+Y+K G + R +FD + ++D VVSWN+MI GY NG +E+A +L
Sbjct: 195 ESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRD---VVSWNAMIAGYVQNGLIEDALKL 251
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F +PKR+ ++W+ +++GY + + +F +M N ++++++ S+
Sbjct: 252 FQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKM----PEQNLVSWNTMIAGYVQNGSV 307
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++ K+ ++ +V A+ +A++G +E + ++F MP+ N +SW M+ G
Sbjct: 308 KEAF----KLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGY 363
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+++G A+ ++ LF +M+ + PN T VL AC+ ++++G
Sbjct: 364 SQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQG 407
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 274/594 (46%), Gaps = 99/594 (16%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIH-KERYLTTRLLIMYLGSRKSL 73
++++S ++ CL + + + LH H+I+T ++ L +L+ +Y+ +
Sbjct: 65 STYDSLLQGCL-------NAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLV 117
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP------------------- 114
EA + ++ ++V MI A + + +EA F M
Sbjct: 118 EARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACT 177
Query: 115 -----------------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
E N L+ + K G +E + F++ P ++V+SW A I
Sbjct: 178 DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIA 237
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G+VQNG +ALKLF ++ + V +T++++ A+ D + +F+ E+
Sbjct: 238 GYVQNGLIEDALKLFQEIPKRDV----ITWNTMMAGYAQCGDVENAVE----LFEKMPEQ 289
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
++ N++I ++ G V A +F M +R+V+SW ++ F + G + EA ++F MP
Sbjct: 290 NLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMP 349
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
E N VSW+ MIA Y+Q+G E A +LF QM KPNT F+IVL A A+L L G
Sbjct: 350 ECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNE 409
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
H V++ G + DV + N L+ +Y+KCG +D R VFD + ++D A S ++MI GY +
Sbjct: 410 AHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSA---SLSAMIVGYAI 466
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
NG +E+ ELF+ M QF +G P++ TF V
Sbjct: 467 NGCSKESLELFEQM-------------------QF------------TGLKPDRVTFVGV 495
Query: 458 LCASASVASLEKGK---DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
L A +++G+ D+ + + + + + D ++G + + + ++MP
Sbjct: 496 LSACCHAGLVDEGRQYFDIMTRFYHITPAMEHY--GCMIDLLGRAGCFDEANDLINKMPI 553
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-----PNELTILSVLFACS 563
K + M L + +I+L E++ + I P +LS ++A +
Sbjct: 554 KPDAD---MWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAA 604
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 122/257 (47%), Gaps = 25/257 (9%)
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP-YDVFLGTALTDTY 496
+ +M+ +G P+ ST+ S+L + SL K LH +I+ F D+ LG L Y
Sbjct: 51 ILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIY 110
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K G + +RRVFD MP KN +SWT M+ A + +E++ F EM+ I PN T
Sbjct: 111 VKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFA 170
Query: 557 SVLFACS--------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
S+L AC+ H +V G F S + N +VDM ++ G + A
Sbjct: 171 SILPACTDLEVLGEFHDEIVKGG---FESNVFVGN---------GLVDMYAKRGCIEFAR 218
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ + MP + D +W ++++G Y + E A+K ++ + + + YA G
Sbjct: 219 ELFDKMP-QRDVVSWNAMIAG---YVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCG 274
Query: 669 RWIDAMNVRKLMTEKGL 685
+A+ + + M E+ L
Sbjct: 275 DVENAVELFEKMPEQNL 291
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/639 (34%), Positives = 367/639 (57%), Gaps = 43/639 (6%)
Query: 83 NGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
+GF ++ + N +I+A + G+LE+ ++LFD MP+RN +W ++++G K G ++E+
Sbjct: 49 SGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSL 108
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F P ++ +W + + GF Q+ EAL F + + G NE TF+S AC+ +ND
Sbjct: 109 FRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDM 168
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G+ + LI K S C S DV + ++D++
Sbjct: 169 NRGVQIHSLIAK-------SPCLS------------------------DVYIGSALVDMY 197
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+ G++ +A+++FDEM +RN VSW+ +I Y Q+G EA ++F+ M +P+ +
Sbjct: 198 SKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLA 257
Query: 321 IVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
V+SA ASL A++ G VHA V+K+ + D+ +SNA +D+Y+KC K+ R +FDS+
Sbjct: 258 SVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM-- 315
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ +V++ SM+ GY + + A+ +F M +RN VSW+A+I+GY ++ + + ++F
Sbjct: 316 -PIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY------DVFLGTALT 493
+ P TF+++L A A +A L G H ++K GF + D+F+G +L
Sbjct: 375 CLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D Y K G +E VF +M +++ +SW M+ G A++GY E++ LF EM + P+ +
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHI 494
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T++ VL AC H+G V++G YF+SM + + P HYTC+VD+L R+G L EA+ I
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEE 554
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP +PDS W SLL+ CK ++N + + + L+++ + YVLLSN+YA G+W DA
Sbjct: 555 MPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDA 614
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
MNVRKLM ++G+ K GCSW+++ H F K +P+
Sbjct: 615 MNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPR 653
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 237/519 (45%), Gaps = 100/519 (19%)
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
SF F KLL+S +K + S+I C V + K+GF V + N
Sbjct: 15 SFTVSSPFAKLLDSCIK---LKLSAIDVRC-----------VHASVIKSGFSNEVFIQNR 60
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
LI K G ++ R +FD+M +R+V +W ++ ++G L EA +F MPER++ +W
Sbjct: 61 LIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ M++ + Q EEA F M + F N F+ LSA + L + G+ +H+ + K
Sbjct: 121 NSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAK 180
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
DV+I +AL+D+YSKCG D + VFD + +++ VVSWNS+I Y NG EA
Sbjct: 181 SPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRN---VVSWNSLITCYEQNGPAVEA 237
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
VF ML S P++ T +SV+ A AS+
Sbjct: 238 -------------------------------LKVFQVMLESWVEPDEVTLASVISACASL 266
Query: 465 ASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP---------- 513
++++ G+++H +++K+ D+ L A D YAK I+ +R +FD MP
Sbjct: 267 SAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 514 ---------------------DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
++N +SW ++ G ++G +E+++LF +++ S+ P
Sbjct: 327 VSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Query: 553 LTILSVLFAC-----------SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
T ++L AC +H ++ G K+ + E + + ++DM +
Sbjct: 387 YTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS------LIDMYVKC 440
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKT--YKNEQI 638
G + E M E D +W +++ G Y NE +
Sbjct: 441 GCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEAL 478
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 366/630 (58%), Gaps = 3/630 (0%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + + N ++N + G +A LF+ MP + SW ++SG+ K G++E++ F+
Sbjct: 8 FSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLI 67
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++ +SWT I G+ Q G +A+K+F+ +++ V P + T +++ +CA +G
Sbjct: 68 PVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGK 127
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V + K G V V NSL+ + K G++ +A+ VFDRM+ R+ SW ++ + + G
Sbjct: 128 KVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCG 187
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
+ A F+ + ER+ VSW+ MIA NQ G+ EA + F + + S KP+ + L
Sbjct: 188 RVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASAL 247
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA A+L+ L G +H ++++ + + NALI +Y+K G + R + + D+
Sbjct: 248 SACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL- 306
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V+++ +++ GY G + A+++F+++ + V+W+A+I GY+++ + VF M+
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G PN T +++L AS+SV SL GK +H I+ G +G ALT YAK+G I
Sbjct: 367 SEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSIN 426
Query: 504 SSRRVFDRM-PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+R+VF+ + +++ +SWT M+ LA+ G +E+I LFE+M I P+ +T + VL AC
Sbjct: 427 GARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC 486
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+H GLV++G YF+ M+ ++ I P HY C+VD+ R+G L EA F+ +MP EPD A
Sbjct: 487 THGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIA 546
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W SLLS CK YKN +A+ A + L + + Y L+N+Y+S G+W DA +RKLM
Sbjct: 547 WGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKA 606
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G++K G SWV+++N+ H F + +P+
Sbjct: 607 RGVKKEQGLSWVQIQNKTHVFGVEDGLHPQ 636
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 234/488 (47%), Gaps = 73/488 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H ++K G+H + LL MY +
Sbjct: 126 GKKVHSFVVKLGLHACVPVANSLLNMYAKT------------------------------ 155
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+L+ A+ +FD M RN SW A+IS M GRV+ ++ FE ++++SW + I G
Sbjct: 156 -GDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGC 214
Query: 160 VQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
Q+GF EAL+ F +L ++ +KP+ + +S ACA + G + G I + F+
Sbjct: 215 NQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDAS 274
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDR--MEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+V N+LI++ K G V++AR + ++ + DV+++T +L+ ++++GD+ AR+IF+ +
Sbjct: 275 GAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSL 334
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
+ + V+W+ MI Y Q+G +A +F+ M +PN+ + +LSA +S+ +L G
Sbjct: 335 KDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGK 394
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+HA ++ G + NAL +Y+K G R VF+ + + VSW SMI
Sbjct: 395 QIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQN--RDTVSWTSMIMALA 452
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
+G EEA ELF+ +ML G P+ T+
Sbjct: 453 QHGLGEEAIELFE-------------------------------QMLTLGIKPDHITYVG 481
Query: 457 VLCASASVASLEKGK---DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
VL A +E+G+ DL + K+ + + D + ++G ++ + + + MP
Sbjct: 482 VLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHY--ACMVDLFGRAGLLQEAYKFVENMP 539
Query: 514 -DKNEISW 520
+ + I+W
Sbjct: 540 MEPDVIAW 547
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 229/453 (50%), Gaps = 40/453 (8%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ K G V + N+L+ L K G A +F+ M + SW IL + + G L +A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
++FD +P R+ VSW+ +I YNQ G E+A ++F M + P + VL++ A+
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ G VH+ V+K+G+ V ++N+L+++Y+K G+ K ++VFD + ++ + SWN
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTS---SWN 177
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI- 448
+MI + G+++ A F+ + +R+ VSW+++I+G +H + F+ +L +
Sbjct: 178 AMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLK 237
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS--------- 499
P++ + +S L A A++ L GK +HG I++ F +G AL YAKS
Sbjct: 238 PDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRI 297
Query: 500 ------------------------GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
GDI +R++F+ + D + ++WT M+ G ++G +
Sbjct: 298 IEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNND 357
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEPIYNIKPNGRHYTCV 594
+I +F+ M PN T+ ++L A S ++ G + + +++ + P+ + +
Sbjct: 358 AIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--AL 415
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
M +++G ++ A N + D+ +W S++
Sbjct: 416 TTMYAKAGSINGARKVFNLLRQNRDTVSWTSMI 448
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 171/424 (40%), Gaps = 104/424 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD--LNGFDLVVHNCMINAN 97
G+ +HG++++T + L+ MY S A I++ ++ D++ ++N
Sbjct: 259 GKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGY 318
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
++ G++ A+++F+ + + + V+WTA+ I
Sbjct: 319 VKLGDITPARQIFNSLKDPDVVAWTAM-------------------------------IV 347
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G+VQNG + +A+++F ++ G +PN T +++ A + + G + ++G
Sbjct: 348 GYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEAL 407
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
SV N+L T+ K G ++ AR VF+ + + RD VSWT
Sbjct: 408 SPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWT---------------------- 445
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
MI Q G EEA LF QM KP+ + VLSA
Sbjct: 446 ---------SMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC---------- 486
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI--VEKDVAHVVSWNSMIGG 394
+ G + GR FD + V K + + M+
Sbjct: 487 -------------------------THGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDL 521
Query: 395 YGLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
+G G ++EA + +NMP DV +W +++S +K DL V E LL E N
Sbjct: 522 FGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLA-KVAAERLLLIEPNNSGA 580
Query: 454 FSSV 457
+S++
Sbjct: 581 YSAL 584
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/634 (34%), Positives = 371/634 (58%), Gaps = 18/634 (2%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER- 143
++ V N +I+ + G+L++A+++ MPER+ V+W ++I+ +G V E++ + E+
Sbjct: 193 LNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKM 252
Query: 144 ----NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
NV+SW+A I GF QNG+ EA+++ ++ G+ PN T + + ACA +
Sbjct: 253 KSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQR 312
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG + G I + F + V N+L+ + + G++ A +F + ++V+S ++
Sbjct: 313 LDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVG 372
Query: 260 FIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKP 314
+ E GD+ +A+ +FD M ER +SW+ +I+ Y ++ +EAF +F+ M +P
Sbjct: 373 YCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEP 432
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
++ VL+A A +LR G +HA + G++ D F+ AL+++YSKC + ++ F
Sbjct: 433 DSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAF 492
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHK 430
D ++EKDV +WN++I GY + Q+E + L + M N +W++I++G +E++
Sbjct: 493 DEVMEKDVP---TWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENR 549
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
Q DL +F+EM +S P+ T +L A + +A+LE+GK H IK G+ DV +G
Sbjct: 550 QLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGA 609
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D YAK G ++ ++ +DR+ + N +S M+ A G+ +E I+LF+ M P
Sbjct: 610 ALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIP 669
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+ +T LSVL +C H G V+ G ++F+ M YN+KP +HYT +VD+LSRSG+L EA +
Sbjct: 670 DHVTFLSVLSSCVHVGSVETGCEFFDLMG-YYNVKPTLKHYTSMVDLLSRSGQLHEAYEL 728
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
I MP E DS W +LL GC T+ N ++ E A + L +L + YVLL+N++A A RW
Sbjct: 729 IKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRW 788
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
D VR +M ++G+ KS GCSW+E +N++H F
Sbjct: 789 TDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFL 822
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 176/622 (28%), Positives = 291/622 (46%), Gaps = 82/622 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H H IKTG + ++ T+LL MY +
Sbjct: 78 GKQVHAHTIKTGFDADGFIDTKLLQMY-------------------------------AR 106
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G L++A LF+ MP RN SW A++S ++ HG EE+ F+ F
Sbjct: 107 CGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQF------------- 153
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
GV+ + F + KAC+ + LG + GL+ K F ++
Sbjct: 154 ------------------DGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNI 195
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE- 278
V N+LI + K G +D A+ V +M +RD V+W ++ G + EA ++M
Sbjct: 196 YVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSL 255
Query: 279 ----RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
N VSWS +I + Q+GY EEA + +M PN + VL A A L+ L
Sbjct: 256 DYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDL 315
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +H ++ + + + NAL+D+Y +CG+ +F ++ V +V+S N+MI G
Sbjct: 316 GKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIF---LKFSVKNVLSCNTMIVG 372
Query: 395 YGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-P 449
Y +G + +AKELFD M +R +SW++IISGY+ + FD F++F ML+ I P
Sbjct: 373 YCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEP 432
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ T SVL A A SL +GK++H + I G D F+G AL + Y+K D+ +++ F
Sbjct: 433 DSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAF 492
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
D + +K+ +W ++ G S + L E+M+ PN T S+L + +D
Sbjct: 493 DEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLD 552
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL---SEAEDFINSMPFEPDSNAWASL 626
++ F+ M+ I ++P+ ++ SR L +A ++ D + A+L
Sbjct: 553 LTMQLFSEMQ-ISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAAL 611
Query: 627 L---SGCKTYKNEQIAERAVKN 645
+ + C + K Q+A + N
Sbjct: 612 VDMYAKCGSLKYAQLAYDRISN 633
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 213/473 (45%), Gaps = 53/473 (11%)
Query: 181 KP-NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
KP N ++S+ +C +LG V K GF+ + L+ + + G + A
Sbjct: 58 KPLNTSKYASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDAD 114
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+F+ M R++ SW IL V+++ G +F EE
Sbjct: 115 FLFETMPMRNLHSWKAILSVYLDHG-------LF------------------------EE 143
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
AF LF+ + + + F +V A + L ++ G +H V+K ++++SNALID
Sbjct: 144 AFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALID 203
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK-----R 414
+Y KCG D + V + E+D V+WNS+I NG + EA E + M
Sbjct: 204 MYGKCGSLDDAKKVLVKMPERD---SVTWNSVITACAANGMVYEALEFLEKMKSLDYSMP 260
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
N VSWSA+I G+ ++ + + M + G +PN T + VL A A + L+ GK LH
Sbjct: 261 NVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLH 320
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
G I + F + + AL D Y + GD+ + ++F + KN +S M+ G ESG
Sbjct: 321 GYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVS 380
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN----GRH 590
++ LF+ M+ I ++ S++ + + D+ F +M I+P+ G
Sbjct: 381 KAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSV 440
Query: 591 YTCVVDMLS-RSGRLSEAEDFINSMPFEPDS---NAWASLLSGCKTYKNEQIA 639
T D +S R G+ A+ + + + D+ A + S C+ Q+A
Sbjct: 441 LTACADTISLRQGKEIHAQAIVKGL--QSDTFVGGALVEMYSKCQDLTAAQVA 491
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
N LL + N S ++SVL S + GK +H IK GF D F+ T L YA+
Sbjct: 51 NFSLLDNKPLNTSKYASVL---DSCKCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARC 107
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G ++ + +F+ MP +N SW ++ + G +E+ LF+ ++ + + V
Sbjct: 108 GLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVF 167
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACS G V+ G + + + + N ++DM + G L +A+ + MP E D
Sbjct: 168 KACSGLGSVELG-RQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMP-ERD 225
Query: 620 SNAWASLLSGC 630
S W S+++ C
Sbjct: 226 SVTWNSVITAC 236
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD-LNGFDLVVHNCMINAN 97
+G+ H H IK G + ++ L+ MY SL+ ++ D ++ +LV HN M+ A
Sbjct: 588 RGKQAHAHSIKCGYDTDVHIGAALVDMY-AKCGSLKYAQLAYDRISNPNLVSHNAMLTAC 646
Query: 98 IQWGNLEEAQRLFDGMPE----RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS-- 151
G+ EE LF M + V++ +++S + G VE +F+ + NV
Sbjct: 647 AMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMGYYNVKPTL 706
Query: 152 --WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+T+ + ++G EA +L K+ V+ + V + ++ C + LG
Sbjct: 707 KHYTSMVDLLSRSGQLHEAYELIKKM---PVECDSVLWGALLGGCVTHGNIELG 757
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/695 (32%), Positives = 378/695 (54%), Gaps = 33/695 (4%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR 70
+ P + S+ + C+ LL+ GR +H +IK G+ RYL L
Sbjct: 2 LTPTPNPPSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGL---RYLGVFLT------- 51
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
N ++N ++ G+ +A RLFD MP + SW ++S K
Sbjct: 52 --------------------NNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAK 91
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G ++ + F+ P + +SWT I G+ G A+ FL+++ SG+ P + TF+++
Sbjct: 92 AGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNV 151
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
+CA +G V + K G V V NSL+ + K G+ +A+ VFDRM +D
Sbjct: 152 LASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDT 211
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+W ++ + ++ A +FD+M + + VSW+ +I Y GY A F M +
Sbjct: 212 STWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKS 271
Query: 311 S-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
S KP+ VLSA A+ ++L+ G +HAH+++ ++ + NALI +Y+K G +
Sbjct: 272 SSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEV 331
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+ + I +V+++ S++ GY G ++ A+ +FD++ R+ V+W+A+I GY ++
Sbjct: 332 AHRIVE-ITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQN 390
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+F M+ G PN T ++VL +S+ASL+ GK LH I+L V +G
Sbjct: 391 GLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVG 450
Query: 490 TALTDTYAKSGDIESSRRVFDRMPD-KNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL Y++SG I+ +R++F+ + ++ ++WT M+ LA+ G E+I LFE+M + ++
Sbjct: 451 NALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINL 510
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+ +T + VL AC+H GLV++G YFN M+ ++NI+P HY C++D+L R+G L EA
Sbjct: 511 KPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAY 570
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+FI +MP EPD AW SLLS C+ +K +A+ A + L + + Y+ L+N ++ G
Sbjct: 571 NFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACG 630
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+W DA VRK M +K ++K G SWV+++N+VH F
Sbjct: 631 KWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIF 665
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/630 (35%), Positives = 359/630 (56%), Gaps = 43/630 (6%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ + G L EA+R+FDG+P RN S+ AL+S + + GR +E+ FE P +
Sbjct: 56 NTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 151 SWTAAICGFVQNG--FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
S+ A + ++G + +AL+ + N +F+S ACA D R G V G
Sbjct: 116 SYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHG 175
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L+ ++ V + +L+ + K +R V +
Sbjct: 176 LVARSPHADDVHIGTALVDMYAKC--------------ERPV-----------------D 204
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARR+FD MPERN VSW+ +I Y Q+G EA LF +M F P+ S V+SA A
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAG 264
Query: 329 LKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L A R G VHAH++K + D+ ++NAL+D+Y+KCG T + R +FDS+ + V VS
Sbjct: 265 LAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSV---VS 321
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
S++ GY + +E+A+ +F M ++N ++W+ +I+ Y ++ + + +F ++
Sbjct: 322 ETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD------VFLGTALTDTYAKSGD 501
P T+ +VL A ++A L+ G+ H ++K GF +D VF+G +L D Y K+G
Sbjct: 382 WPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGS 441
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
I+ +VF+RM ++ +SW M+ G A++G AK++++LFE M ++ P+ +T++ VL A
Sbjct: 442 IDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSA 501
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C HSGLVD+G ++F+ M + I P+ HYTC+VD+L R+G L EAE+ I MP EPDS
Sbjct: 502 CGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSV 561
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
WASLL C+ +KN ++ ER L++L E+ YVLLSN+YA G+W D VR+ M
Sbjct: 562 LWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMK 621
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++G+ K GCSW+E+ ++++ F + + +P
Sbjct: 622 DRGVSKQPGCSWIEIGSKMNVFLARDNRHP 651
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 154/302 (50%), Gaps = 8/302 (2%)
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+S + +L + SL R+ H VLK + + F+ N L+ Y++ G ++ R VFD
Sbjct: 20 SSPLADLLRSAPSLPGARAA---HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFD 76
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
I ++ S+N+++ Y G+ +EA+ LF+ +P + S++A+++ H +
Sbjct: 77 GIPLRN---TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAG 133
Query: 436 FAV--FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
A+ M + N +F+S L A A+ L G+ +HG + + DV +GTAL
Sbjct: 134 DALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALV 193
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK +RRVFD MP++N +SW ++ ++G E++ LF EM T P+E+
Sbjct: 194 DMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEV 253
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T+ SV+ AC+ +G + M ++ + +VDM ++ GR EA +S
Sbjct: 254 TLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDS 313
Query: 614 MP 615
MP
Sbjct: 314 MP 315
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 172/384 (44%), Gaps = 47/384 (12%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ + A+ + +D D+V++N +++ + G EA+ +FD MP R+ VS T++++G+ K
Sbjct: 272 RQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAK 331
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
VE++ F + +NVI+W I + QNG EA++LF++L + P T+ ++
Sbjct: 332 SANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNV 391
Query: 191 CKACAEINDFRLGLSVFGLIFKAGF------EKHVSVCNSLITLSLKMGEVDLARSVFDR 244
AC I +LG + K GF E V V NSL+ + LK G +D VF+R
Sbjct: 392 LNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFER 451
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M RD VSW + MI Y Q+G ++A LF
Sbjct: 452 MAARDNVSW-------------------------------NAMIVGYAQNGRAKDALHLF 480
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSK 363
+M + P++ VLSA + G H H GI ++DL +
Sbjct: 481 ERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGR 540
Query: 364 CGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRNDVS 418
G K+ L+ D E D V W S++G L+ +E A LF+ P+ N
Sbjct: 541 AGHLKEAEELIKDMPTEPD---SVLWASLLGACRLHKNVELGERTAGRLFELDPE-NSGP 596
Query: 419 WSAIISGYLEHKQFDLVFAVFNEM 442
+ + + Y E ++ VF V M
Sbjct: 597 YVLLSNMYAEMGKWADVFRVRRSM 620
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/712 (31%), Positives = 381/712 (53%), Gaps = 78/712 (10%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
L S + F +++C I S+ I R +H +IK+G E ++ RL
Sbjct: 13 LSSFTDSSPFAKLLDSC------IKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL----- 61
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
I+A + G+LE+ +++FD MP+RN +W ++++G
Sbjct: 62 --------------------------IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTG 95
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
K G ++E+ F P ++ +W + + GF Q+ EAL F + + G NE +F
Sbjct: 96 LTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSF 155
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+S+ AC+ +ND G+ V LI K+ F V + ++L+
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV--------------------- 194
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
D++ + G++ +A+R+FDEM +RN VSW+ +I + Q+G EA +F+ M
Sbjct: 195 ----------DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGE 366
+P+ + V+SA ASL A++ G VH V+K + D+ +SNA +D+Y+KC
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
K+ R +FDS+ + +V++ SMI GY + + A+ +F M +RN VSW+A+I+GY
Sbjct: 305 IKEARFIFDSM---PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY-- 484
++ + + ++F + P +F+++L A A +A L G H ++K GF +
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 421
Query: 485 ----DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D+F+G +L D Y K G +E VF +M +++ +SW M+ G A++GY E++ LF
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EM ++ P+ +T++ VL AC H+G V++G YF+SM + + P HYTC+VD+L R
Sbjct: 482 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G L EA+ I MP +PDS W SLL+ CK ++N + + + L ++ + YVLL
Sbjct: 542 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLL 601
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SN+YA G+W D MNVRK M ++G+ K GCSW++++ H F K +P+
Sbjct: 602 SNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPR 653
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/616 (35%), Positives = 364/616 (59%), Gaps = 50/616 (8%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V +N MI+ ++ A+ LFD MPER+ SW +++G++++ R+ E+ F+ P +
Sbjct: 78 VSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK 137
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+V+SW A + G+ QNGF EA ++F K+ P+ + S A +++ RL +
Sbjct: 138 DVVSWNAMLSGYAQNGFVDEAREVFNKM------PHRNSISWNGLLAAYVHNGRLKEAR- 190
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+F++ + N L+ +K + AR +FDRM RDV+SW ++ + ++GDL
Sbjct: 191 -RLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLS 249
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A+R+F+E P R+ +W+ M++ Y Q+G +EA + F +M
Sbjct: 250 QAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP------------------- 290
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
K+ NA++ Y + + +F+++ ++++ S
Sbjct: 291 --------------------VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNIS---S 327
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN+MI GYG NG + +A++LFD MP+R+ VSW+AIISGY ++ ++ +F EM GE
Sbjct: 328 WNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGE 387
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
N+STFS L A +A+LE GK +HG+++K GF F+G AL Y K G + +
Sbjct: 388 SSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEAND 447
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF+ + +K+ +SW M+ G A G+ ++++ LFE M+K + P+E+T++ VL ACSHSGL
Sbjct: 448 VFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGL 507
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+D+G +YF SM+ YN+KP +HYTC++D+L R+GRL EAE+ + +MPF+P + +W +LL
Sbjct: 508 IDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
+ + N ++ E+A + ++K+ ++ YVLLSN+YA++GRW+D +R M E G++K
Sbjct: 568 GASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQK 627
Query: 688 SGGCSWVEVRNQVHFF 703
G SWVEV+N++H F
Sbjct: 628 VTGYSWVEVQNKIHTF 643
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/564 (26%), Positives = 248/564 (43%), Gaps = 110/564 (19%)
Query: 30 DITSQNLVIQGRALHGHL-----IKTGIHKERYLTTRLLIM-YLGSRKSLEANEIVKDLN 83
DI + N I +GH + + + ++ +I YL + K A ++ +
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
DL N M+ ++ L EA +LFD MP+++ VSW A++SG+ ++G V+E+ F +
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNK 164
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLK-----------LLESGVKPNE-------- 184
P +N ISW + +V NG EA +LF L+ VK N
Sbjct: 165 MPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLF 224
Query: 185 --------VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
++++++ A++ D LS +F + V ++++ ++ G VD
Sbjct: 225 DRMPVRDVISWNTMISGYAQVGD----LSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVD 280
Query: 237 LARSVFDRMEK-------------------------------RDVVSWTVILDVFIEMGD 265
AR FD M R++ SW ++ + + G
Sbjct: 281 EARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGG 340
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ +AR++FD MP+R+ VSW+ +I+ Y Q+G+ EEA +F +M R N S FS LS
Sbjct: 341 IAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALST 400
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A + AL G VH V+K G E F+ NAL+ +Y KCG T + VF+ I EKD V
Sbjct: 401 CADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKD---V 457
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN+MI GY +G +A LF++M K +
Sbjct: 458 VSWNTMIAGYARHGFGRQALVLFESMKK-------------------------------A 486
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGD 501
G P++ T VL A + +++G + + Y+V T + D ++G
Sbjct: 487 GVKPDEITMVGVLSACSHSGLIDRGTEY---FYSMDRDYNVKPTSKHYTCMIDLLGRAGR 543
Query: 502 IESSRRVFDRMP-DKNEISWTVMV 524
+E + + MP D SW ++
Sbjct: 544 LEEAENLMRNMPFDPGAASWGALL 567
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 179/414 (43%), Gaps = 71/414 (17%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D+ S N +I G A G L ++ + T ++ Y+ + EA + +
Sbjct: 229 VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDE 288
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+ + + +N M+ +Q+ + A LF+ MP RN SW +I+G+ ++G + ++ F
Sbjct: 289 MPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLF 348
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++ +SW A I G+ QNG EAL +F+++ G N TFS CA+I
Sbjct: 349 DMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALE 408
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
LG V G + KAGFE V N+L+ + K G D A VF+ +E++DVVS
Sbjct: 409 LGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVS--------- 459
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
W+ MIA Y + G+ +A LF M + KP+
Sbjct: 460 ----------------------WNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVG 497
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLSA + H+ ++ G E YS + D V+
Sbjct: 498 VLSACS-----------HSGLIDRGTEY----------FYS---------MDRDYNVKPT 527
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
H + MI G G++EEA+ L NMP SW A++ H +L
Sbjct: 528 SKH---YTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTEL 578
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 39/307 (12%)
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+V+WN I + NG + A +F++MP+R+ VS++A+ISGYL + +F L +F++M
Sbjct: 46 IVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM-- 103
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
P + FS + + V + G + H K+ L DV A+ YA++G ++
Sbjct: 104 ----PERDLFSWNVMLTGYVRNRRLG-EAH-KLFDLMPKKDVVSWNAMLSGYAQNGFVDE 157
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R VF++MP +N ISW ++ +G KE+ LFE + + + C
Sbjct: 158 AREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWEL---------ISWNCLM 208
Query: 565 SGLVDKGL-----KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
G V + + + F+ M P+ ++ + ++ ++ G LS+A+ N P D
Sbjct: 209 GGYVKRNMLGDARQLFDRM-PVRDVIS----WNTMISGYAQVGDLSQAKRLFNESPIR-D 262
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP-------AGYVLLSNIYASAGRWID 672
W +++SG Y + + A K ++ ++ AGYV + AG +
Sbjct: 263 VFTWTAMVSG---YVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKM-VIAGELFE 318
Query: 673 AMNVRKL 679
AM R +
Sbjct: 319 AMPCRNI 325
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 108/319 (33%), Gaps = 108/319 (33%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E+S S L DI + L G+ +HG ++K G ++ LL MY +
Sbjct: 387 ESSNRSTFSCALSTCADIAALEL---GKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTD 443
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
EAN++ F+G+ E++ VSW +I+G+ +H
Sbjct: 444 EANDV-------------------------------FEGIEEKDVVSWNTMIAGYARH-- 470
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
GF +AL LF + ++GVKP+E+T + A
Sbjct: 471 -----------------------------GFGRQALVLFESMKKAGVKPDEITMVGVLSA 501
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS- 252
C+ G +D F M++ V
Sbjct: 502 CSH-----------------------------------SGLIDRGTEYFYSMDRDYNVKP 526
Query: 253 ----WTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
+T ++D+ G L EA + MP + SW ++ G E + +
Sbjct: 527 TSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMV 586
Query: 308 TRYSFKPNTSCFSIVLSAL 326
+ +P S ++LS L
Sbjct: 587 --FKMEPQNSGMYVLLSNL 603
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 49/180 (27%)
Query: 485 DVFLGTALTDTYAKSGDIESSRRV-------------------------------FDRMP 513
D+ ++ ++G +S+ RV FD+MP
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+++ SW VM+ G + E+ LF+ M K + ++ ++L + +G VD+ +
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDV----VSWNAMLSGYAQNGFVDEARE 160
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN----AWASLLSG 629
FN M +I NG ++ +GRL EA FE SN +W L+ G
Sbjct: 161 VFNKMPHRNSISWNG-----LLAAYVHNGRLKEARRL-----FESQSNWELISWNCLMGG 210
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/619 (35%), Positives = 363/619 (58%), Gaps = 57/619 (9%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V +N MI+ + + A+++F+ MP+R+ +SW ++SG++K+G + + F + P +
Sbjct: 92 VTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEK 151
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE---INDFRLGL 204
+V+SW A + GF QNGF EA K+F ++L VK NE++++ + A + I D R
Sbjct: 152 DVVSWNAMLSGFAQNGFVEEARKIFDQML---VK-NEISWNGLLSAYVQNGRIEDARR-- 205
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+F + + + N L+ ++ +D ARS+FDRM RD +SW +++ + + G
Sbjct: 206 -----LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
L EARR+F+E+P R+ +W+ M++ + Q+G +EA R+F +M
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP---------------- 304
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
EK+ NA+I Y + + + R +FD + ++ +
Sbjct: 305 -----------------------EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTS- 340
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
SWN+M+ GY G +++AK LFD MP+R+ +SW+A+ISGY + Q + +F +M
Sbjct: 341 --SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR 398
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G I N+S + L + A +A+LE GK LHG+++K GF G AL Y K G IE
Sbjct: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ VF+ + +K+ +SW M+ G A G+ KE++ LFE M K +I P+++T++ VL ACSH
Sbjct: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSH 517
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+GLVDKG++YFNSM Y I N +HYTC++D+L R+GRL EA + + SMPF PD+ W
Sbjct: 518 TGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 577
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL + + + ++ E+A + ++++ ++ YVLLSN+YA++GRW + +R M +KG
Sbjct: 578 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637
Query: 685 LRKSGGCSWVEVRNQVHFF 703
++K G SWVE++N+ H F
Sbjct: 638 VKKVPGYSWVEIQNKTHIF 656
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 267/560 (47%), Gaps = 74/560 (13%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHG------HLIKTGIHKER 56
++ R+LF+ PE KD+ S N ++ G A +G + + K
Sbjct: 139 SAARALFNQMPE--------------KDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNE 184
Query: 57 YLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
LL Y+ + + +A + +++V NC++ ++ L++A+ LFD MP R
Sbjct: 185 ISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR 244
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+++SW +I+G+ ++G + E+ FE P ++V +WTA + GFVQNG EA ++F ++
Sbjct: 245 DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP 304
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
E NEV++ N++I ++ +++
Sbjct: 305 EK----NEVSW-----------------------------------NAMIAGYVQSQQIE 325
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
AR +FD+M R+ SW ++ + + G++ +A+ +FDEMP+R+ +SW+ MI+ Y QSG
Sbjct: 326 KARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQ 385
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EEA LF +M R N S + LS+ A + AL G +H ++K G + NA
Sbjct: 386 SEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNA 445
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP---K 413
L+ +Y KCG ++ VF+ I EKD +VSWN+MI GY +G +EA LF++M K
Sbjct: 446 LLAMYGKCGSIEEAFDVFEDITEKD---IVSWNTMIAGYARHGFGKEALALFESMKMTIK 502
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKD 472
+DV+ ++S D FN M + G N ++ ++ L++ +
Sbjct: 503 PDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALN 562
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIE----SSRRVFDRMPDKNEISWTVMVRGLA 528
L + + F D AL GD E ++ +VF+ PD N + ++ A
Sbjct: 563 L---MKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPD-NSGMYVLLSNLYA 618
Query: 529 ESGYAKESINLFEEMEKTSI 548
SG +E + +M +
Sbjct: 619 ASGRWREVREMRSKMRDKGV 638
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 183/467 (39%), Gaps = 118/467 (25%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D S N++I G A +G L + ++ + T ++ ++ + EA I ++
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+ + V N MI +Q +E+A+ LFD MP RN SW +++G+ + G ++++ F
Sbjct: 303 MPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILF 362
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++ ISW A I G+ Q+G S EAL LF+K+ G N + +CAEI
Sbjct: 363 DEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALE 422
Query: 202 LGLSVFGLIFKAGF-------------------------------EKHVSVCNSLITLSL 230
LG + G + KAGF EK + N++I
Sbjct: 423 LGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYA 482
Query: 231 KMGEVDLARSVFDRME---KRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-----NEV 282
+ G A ++F+ M+ K D V+ +L G + + F+ M + N
Sbjct: 483 RHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAK 542
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRY------------------------------SF 312
++ MI ++G +EA L + M Y
Sbjct: 543 HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602
Query: 313 KPNTSCFSIVLSALAS-------LKALRSGM----------------HVHAHVLKIG--- 346
+P+ S ++LS L + ++ +RS M H+ +G
Sbjct: 603 EPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662
Query: 347 -----------------IEKDVFISNALIDLYSKCGETKDGRLVFDS 376
++KD F+S+ + L+ E K+ L + S
Sbjct: 663 HPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHS 709
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 370/630 (58%), Gaps = 3/630 (0%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + + N ++N + G A++LFD MP R SW ++S + K G ++ + +F++
Sbjct: 47 FSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++ +SWT I G+ G +A+++ +++ G++P + T +++ + A G
Sbjct: 107 PQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGK 166
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V I K G +VSV NSL+ + K G+ +A+ VFDRM RD+ SW ++ + +++G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSCFSIVL 323
+ A F++M ER+ V+W+ MI+ +NQ GY A +F +M R S P+ + VL
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA A+L+ L G +H+H++ G + + NALI +YS+CG + R + + KD+
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+ + +++ GY G M +AK +F ++ R+ V+W+A+I GY +H + +F M+
Sbjct: 347 -IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G+ PN T +++L ++S+ASL GK +HG +K G Y V + AL YAK+G+I
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 504 SSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
S+ R FD + +++ +SWT M+ LA+ G+A+E++ LFE M + P+ +T + V AC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+H+GLV++G +YF+ M+ + I P HY C+VD+ R+G L EA++FI MP EPD
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W SLLS C+ +KN + + A + L L E+ Y L+N+Y++ G+W +A +RK M +
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K G SW+EV+++VH F + +P+
Sbjct: 646 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPE 675
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 155/598 (25%), Positives = 254/598 (42%), Gaps = 116/598 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L + + + G+ +H ++K G+ ++ LL MY + A + + D
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ N MI ++Q G ++ A F+ M ER+ V+W ++ISGF
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN----------------- 254
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLS 205
Q G+ AL +F K+L +S + P+ T +S+ ACA + +G
Sbjct: 255 --------------QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD--VVSWTVILDVFIEM 263
+ I GF+ V N+LI++ + G V+ AR + ++ +D + +T +LD +I++
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
GD+ +A+ IF + +R+ V+W+ MI Y Q G EA LFR M +PN+ + +L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDV 382
S +SL +L G +H +K G V +SNALI +Y+K G FD I E+D
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD- 479
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VSW SMI +G EEA ELF+ M
Sbjct: 480 --TVSWTSMIIALAQHGHAEEALELFET-------------------------------M 506
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L+ G P+ T+ V A +G +
Sbjct: 507 LMEGLRPDHITYVGVFSAC-----------------------------------THAGLV 531
Query: 503 ESSRRVFDRMPDKNEI-----SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
R+ FD M D ++I + MV +G +E+ E +EK I P+ +T S
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ---EFIEKMPIEPDVVTWGS 588
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKP-NGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L AC +D G + E + ++P N Y+ + ++ S G+ EA SM
Sbjct: 589 LLSACRVHKNIDLGKV---AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 68/356 (19%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
VH V+K G+ V++ N L+++YSK G R +FD E + SWN+++ Y
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFD---EMPLRTAFSWNTVLSAYSK 92
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
G M+ E FD +P+R+ VSW+ +I GY Q+ V +M+ G P + T ++V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR------ 511
L + A+ +E GK +H I+KLG +V + +L + YAK GD ++ VFDR
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 512 -------------------------MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
M +++ ++W M+ G + GY ++++F +M +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 547 S-ITPNELTILSVLFACS-----------HSGLVDKGLK----YFNSMEPIYN------- 583
S ++P+ T+ SVL AC+ HS +V G N++ +Y+
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 584 ----IKPNGRH------YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
I+ G +T ++D + G +++A++ S+ + D AW +++ G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK-DRDVVAWTAMIVG 387
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/697 (33%), Positives = 385/697 (55%), Gaps = 47/697 (6%)
Query: 12 NPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRK 71
+P + S+++ L T G+++H +IK G+H +L L+ Y +
Sbjct: 11 SPSDPYTSFLQRSLKFKDPFT-------GKSIHARIIKAGLHLGVFLMNNLMNFYAKT-- 61
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
G + +A R+FD MP ++ SW ++SG+ K
Sbjct: 62 -----------------------------GFIYDAHRVFDEMPVKSVFSWNIILSGYAKG 92
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
GR+EE+ FE P + +SWTA I G+ Q G A+ +F +++ V P + T +++
Sbjct: 93 GRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVL 152
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
+CA + +G V + K G ++SV NSL+ + K G+ A+ VFDRM+ +
Sbjct: 153 ASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTS 212
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRY 310
SW ++ ++ G + A+ F++M ER+ VSW+ MI+ YNQ G+ EA +F +M
Sbjct: 213 SWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDS 272
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
S KP+ + LSA A+L+ L+ G +HAH+++ + + NALI +YSK G G
Sbjct: 273 SSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSG----G 328
Query: 371 RLVFDSIVEKDVA---HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
+ I+E+ + V+++ +++ GY G + A+ +FD++ R+ V+W+A+I GY+
Sbjct: 329 VEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYV 388
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
++ +F M+ G PN T +++L S+S+ASL+ G+ +H + G V
Sbjct: 389 QNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVS 448
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ AL YAKSG I +R VF+ + ++ I+WT M+ LA+ G +E++ LFE M +
Sbjct: 449 VSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLEN 508
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I P+ +T + VL AC+H GLV++G Y+N M+ + I P HY C++D+ R+G L E
Sbjct: 509 GIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQE 568
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A FI +MP EPD AW SLL+ CK +KN ++AE A + L + E+ Y L+N+Y++
Sbjct: 569 AHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSA 628
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
G+W +A N+RK M +KG++K G SWV+++N+VH F
Sbjct: 629 CGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIF 665
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/630 (34%), Positives = 358/630 (56%), Gaps = 43/630 (6%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ + G L +A+R+FD +P RN S+ AL+S + + GR +E+ FE P +
Sbjct: 56 NTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 151 SWTAAICGFVQNG--FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
S+ A + ++G + +AL+ + N +F+S ACA D R G V G
Sbjct: 116 SYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHG 175
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L+ ++ V + ++L+ + K +R E +
Sbjct: 176 LVARSPHADDVHIRSALVDMYAKC----------ERPE---------------------D 204
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARR+FD MPERN VSW+ +I Y Q+G EA LF +M F P+ S V+SA A
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAG 264
Query: 329 LKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L A R G VHAH++K + D+ ++NAL+D+Y+KCG T + R +FDS+ + + VS
Sbjct: 265 LAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSI---VS 321
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
S++ GY + +E+A+ +F M ++N ++W+ +I+ Y ++ + + +F ++
Sbjct: 322 ETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSI 381
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD------VFLGTALTDTYAKSGD 501
P T+ +VL A ++A L+ G+ H ++K GF +D VF+G +L D Y K+G
Sbjct: 382 WPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGS 441
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
I+ +VF+RM ++ +SW M+ G A++G AK++++LFE M ++ P+ +T++ VL A
Sbjct: 442 IDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSA 501
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C HSGLVD+G +YF+SM + I P+ HYTC+VD+L R+G L EAE+ IN MP EPDS
Sbjct: 502 CGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSV 561
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
WASLL C+ +KN ++ E L++L ++ YVLLSN+YA G+W + VR+ M
Sbjct: 562 LWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMK 621
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++G+ K GCSW+E+ +++ F + +P
Sbjct: 622 DRGVSKQPGCSWIEIGRKMNVFLARDKRHP 651
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 5/292 (1%)
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L S L HA +LK + + F+ N L+ Y++ G +D R VFD I ++
Sbjct: 27 LRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRN---T 83
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV--FNEML 443
S+N+++ Y G+ +EA+ LF+ +P + S++A+++ H + A+ M
Sbjct: 84 FSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMH 143
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+ N +F+S L A A+ G+ +HG + + DV + +AL D YAK E
Sbjct: 144 ADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPE 203
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+RRVFD MP++N +SW ++ ++G E++ LF EM +P+E+T+ SV+ AC+
Sbjct: 204 DARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACA 263
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+G + M ++ + +VDM ++ GR EA +SMP
Sbjct: 264 GLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMP 315
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 189/441 (42%), Gaps = 84/441 (19%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E + +S + C L D +GR +H H++K
Sbjct: 252 EVTLSSVMSACAGLAADR-------EGRQVHAHMVKC----------------------- 281
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ ++D D+V++N +++ + G EA+ +FD MP R+ VS T++++G+ K
Sbjct: 282 ---DRLRD----DMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSAN 334
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
VE++ F + +NVI+W I + QNG EA++LF++L + P T+ ++ A
Sbjct: 335 VEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNA 394
Query: 194 CAEINDFRLGLSVFGLIFKAGF------EKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
C I D +LG + K GF E V V NSL+ + LK G +D VF+RM
Sbjct: 395 CGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 454
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
RD VSW + MI Y Q+G ++A LF +M
Sbjct: 455 RDNVSW-------------------------------NAMIVGYAQNGRAKDALHLFERM 483
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
+ P++ VLSA + G + H+ GI ++DL + G
Sbjct: 484 LCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGH 543
Query: 367 TKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRNDVSWSA 421
K+ L+ D +E D V W S++G L+ +E A LF+ P+ N +
Sbjct: 544 LKEAEELINDMPMEPD---SVLWASLLGACRLHKNVELGEWTAGRLFELDPQ-NSGPYVL 599
Query: 422 IISGYLEHKQFDLVFAVFNEM 442
+ + Y E ++ VF V M
Sbjct: 600 LSNMYAEMGKWAEVFRVRRSM 620
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/628 (35%), Positives = 360/628 (57%), Gaps = 6/628 (0%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
++ D++ F ++H C N +++ G+ E R+ RN+ L+ + K G+++E
Sbjct: 129 VLLDISTFHFLIHACCKNFDVKLGS-EVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEV 187
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
FE+ ++VISW I +V G EAL LF ++L SGV P+E+T S+ CA++
Sbjct: 188 CQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKL 247
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR--DVVSWTV 255
D +G + I S+ N L+ + K G++D A + R ++ DVV WT
Sbjct: 248 KDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTT 307
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ +++ + +AR++FD+M ER+ VSW+ M++ Y Q GY E+ LF+QM + P+
Sbjct: 308 LVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPD 367
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
VLSA L+ G VHA ++ G+ D F+ NAL+DLY+KCG+ + F+
Sbjct: 368 EVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFE 427
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ K A SWNSM+ G+ +G +++A++ F+ +P+++ VSW+ +++ Y++H F+
Sbjct: 428 QLPCKSAA---SWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNES 484
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F +F +M S P+K+T S+L + A V +L G ++ I K D LGTAL D
Sbjct: 485 FEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDM 544
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G +E + +F ++ +KN WT M+ A G A E+I+L+ EME+ + P+ +T
Sbjct: 545 YGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTF 604
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+++L ACSH GLVD+G KYFN + YNI P HY C+VD+L R G L E FI MP
Sbjct: 605 IALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMP 664
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
EPD + W+SL+ C+++ N ++AE+A K L ++ + +VLLSNIYA AGRW D
Sbjct: 665 IEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSK 724
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
VR + E G+ K G + +E VH F
Sbjct: 725 VRTKLHETGVPKQPGFTMIEQNGVVHEF 752
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 243/513 (47%), Gaps = 69/513 (13%)
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
I W + ++ G E L+ + ++ GV + TF + AC + D +LG V G
Sbjct: 99 IIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGR 158
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
I K GF ++ S+ N+L+ L K G++ +F++M RDV+SW ++ ++ G EA
Sbjct: 159 ILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREA 218
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+FDEM + P+E +T S ++S A L
Sbjct: 219 LDLFDEMLVSGVL--------------PDE-------ITMVS----------LVSTCAKL 247
Query: 330 KALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
K L G +H +++ K+ I + N L+D+YSKCG+ + + E +V VV
Sbjct: 248 KDLEMGKRLHLYIVDNKLWIRGSLL--NCLVDMYSKCGKMDEAHGLLSRCDESEV-DVVL 304
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
W +++ GY + ++++A++LFD M +R+ VSW+ ++SGY++ + +F +M
Sbjct: 305 WTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENV 364
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
IP++ +VL A + + G+ +H I+ G D FLG AL D YAK G ++ + R
Sbjct: 365 IPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALR 424
Query: 508 VFDRMPDKNEISWTVMVRGLAESG--------------------------YAK-----ES 536
F+++P K+ SW M+ G SG Y K ES
Sbjct: 425 TFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNES 484
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+F +M+ +++ P++ T++S+L +C+ G ++ G+ + N I + T ++D
Sbjct: 485 FEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGI-WVNVYIEKNEIGIDAMLGTALID 543
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
M + G + A + + E + W ++++
Sbjct: 544 MYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 188/411 (45%), Gaps = 70/411 (17%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L + + +L A +I E + W+ ++ + G P+E + M +
Sbjct: 73 VLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLD 132
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
S F ++ A ++ G VH +LK G ++ ++N L+ LYSKCG+ K+ +F+
Sbjct: 133 ISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFE 192
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ +D V+SWN+MI Y L G EA +LFD
Sbjct: 193 KMTHRD---VISWNTMISCYVLKGMYREALDLFD-------------------------- 223
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII----------------- 478
EML+SG +P++ T S++ A + LE GK LH I+
Sbjct: 224 -----EMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDM 278
Query: 479 --KLG--------------FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
K G DV L T L Y KS I+ +R++FD+M +++ +SWT
Sbjct: 279 YSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTT 338
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M+ G + GY ES+ LF++M ++ P+E+ +++VL AC H D G + ++ Y
Sbjct: 339 MMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLG-RSVHAFIVTY 397
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKT 632
+ +G ++D+ ++ G+L EA +P + + +W S+L G C++
Sbjct: 398 GMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCK-SAASWNSMLDGFCRS 447
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 153/326 (46%), Gaps = 6/326 (1%)
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN-GQMEEAKELFDNMPKRN 415
+IDL C ++ + ++ ++ H S + + L+ ++ A ++ +
Sbjct: 38 IIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
+ W+ ++ L+ V + M+ G + + STF ++ A ++ G ++HG
Sbjct: 98 SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
+I+K GF + L L Y+K G ++ ++F++M ++ ISW M+ G +E
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
+++LF+EM + + P+E+T++S++ C+ ++ G K + + G C+V
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMG-KRLHLYIVDNKLWIRGSLLNCLV 276
Query: 596 DMLSRSGRLSEAEDFINSM-PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
DM S+ G++ EA ++ E D W +L+SG Y ++A + K+ E
Sbjct: 277 DMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSG---YVKSNKIDKARQLFDKMNERSL 333
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLM 680
+ + + Y G + +++ + + M
Sbjct: 334 VSWTTMMSGYVQGGYYCESLELFQQM 359
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 158/359 (44%), Gaps = 43/359 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR++H ++ G+ + +L LL +Y K EA + L N M++ +
Sbjct: 387 GRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCR 446
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G +++A+ F+ +PE++ VSW +++ ++KH ES
Sbjct: 447 SGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNES---------------------- 484
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
++F K+ S VKP++ T S+ +CA++ G+ V I K
Sbjct: 485 ---------FEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDA 535
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+ +LI + K G V++A +F ++ +++V WT ++ + G EA ++ EM ER
Sbjct: 536 MLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEER 595
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRS 334
+ V++ ++A + G +E ++ F ++ + Y+ P + ++ L + L
Sbjct: 596 GVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEE 655
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV----AHVVSWN 389
+ + ++ IE DV I ++L+ + F ++E D AHV+ N
Sbjct: 656 TVKF---IERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSN 711
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/619 (35%), Positives = 362/619 (58%), Gaps = 57/619 (9%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V +N MI+ + + A+++F+ MP+R+ +SW ++SG++K+G + + F + P +
Sbjct: 92 VTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEK 151
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE---INDFRLGL 204
+V+SW A + GF QNGF EA K+F ++L VK NE++++ + A + I D R
Sbjct: 152 DVVSWNAMLSGFAQNGFVEEARKIFDQML---VK-NEISWNGLLSAYVQNGRIEDARR-- 205
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+F + + + N L+ ++ +D ARS+FDRM RD +SW +++ + + G
Sbjct: 206 -----LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNG 260
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
L EARR+F+E+P R+ +W+ M++ + Q+G +EA R+F +M
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP---------------- 304
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
EK+ NA+I Y + + + R +FD + ++ +
Sbjct: 305 -----------------------EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTS- 340
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
SWN+M+ GY G +++AK LFD MP+R+ +SW+A+ISGY + Q + +F +M
Sbjct: 341 --SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKR 398
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G I N+S + L + A +A+LE GK LHG+++K GF G AL Y K G IE
Sbjct: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ VF+ + +K+ +SW M+ G A G+ KE++ LFE M K +I P+++T++ VL ACSH
Sbjct: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSH 517
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+G VDKG++YFNSM Y I N +HYTC++D+L R+GRL EA + + SMPF PD+ W
Sbjct: 518 TGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 577
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL + + + ++ E+A + ++++ ++ YVLLSN+YA++GRW + +R M +KG
Sbjct: 578 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637
Query: 685 LRKSGGCSWVEVRNQVHFF 703
++K G SWVE++N+ H F
Sbjct: 638 VKKVPGYSWVEIQNKTHIF 656
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 267/560 (47%), Gaps = 74/560 (13%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHG------HLIKTGIHKER 56
++ R+LF+ PE KD+ S N ++ G A +G + + K
Sbjct: 139 SAARALFNQMPE--------------KDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNE 184
Query: 57 YLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
LL Y+ + + +A + +++V NC++ ++ L++A+ LFD MP R
Sbjct: 185 ISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR 244
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+++SW +I+G+ ++G + E+ FE P ++V +WTA + GFVQNG EA ++F ++
Sbjct: 245 DKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP 304
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
E NEV++ N++I ++ +++
Sbjct: 305 EK----NEVSW-----------------------------------NAMIAGYVQSQQIE 325
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
AR +FD+M R+ SW ++ + + G++ +A+ +FDEMP+R+ +SW+ MI+ Y QSG
Sbjct: 326 KARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQ 385
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EEA LF +M R N S + LS+ A + AL G +H ++K G + NA
Sbjct: 386 SEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNA 445
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP---K 413
L+ +Y KCG ++ VF+ I EKD +VSWN+MI GY +G +EA LF++M K
Sbjct: 446 LLAMYGKCGSIEEAFDVFEDITEKD---IVSWNTMIAGYARHGFGKEALALFESMKMTIK 502
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKD 472
+DV+ ++S D FN M + G N ++ ++ L++ +
Sbjct: 503 PDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALN 562
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIE----SSRRVFDRMPDKNEISWTVMVRGLA 528
L + + F D AL GD E ++ +VF+ PD N + ++ A
Sbjct: 563 L---MKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPD-NSGMYVLLSNLYA 618
Query: 529 ESGYAKESINLFEEMEKTSI 548
SG +E + +M +
Sbjct: 619 ASGRWREVREMRSKMRDKGV 638
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 183/467 (39%), Gaps = 118/467 (25%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D S N++I G A +G L + ++ + T ++ ++ + EA I ++
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+ + V N MI +Q +E+A+ LFD MP RN SW +++G+ + G ++++ F
Sbjct: 303 MPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILF 362
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++ ISW A I G+ Q+G S EAL LF+K+ G N + +CAEI
Sbjct: 363 DEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALE 422
Query: 202 LGLSVFGLIFKAGF-------------------------------EKHVSVCNSLITLSL 230
LG + G + KAGF EK + N++I
Sbjct: 423 LGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYA 482
Query: 231 KMGEVDLARSVFDRME---KRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-----NEV 282
+ G A ++F+ M+ K D V+ +L G + + F+ M + N
Sbjct: 483 RHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAK 542
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRY------------------------------SF 312
++ MI ++G +EA L + M Y
Sbjct: 543 HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602
Query: 313 KPNTSCFSIVLSALAS-------LKALRSGM----------------HVHAHVLKIG--- 346
+P+ S ++LS L + ++ +RS M H+ +G
Sbjct: 603 EPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662
Query: 347 -----------------IEKDVFISNALIDLYSKCGETKDGRLVFDS 376
++KD F+S+ + L+ E K+ L + S
Sbjct: 663 HPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHS 709
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/687 (33%), Positives = 373/687 (54%), Gaps = 46/687 (6%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
R +H H+I +G Y+ RL+ +Y S + A+ + ++ D+V +I A+
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN A+ +F P ++ + + A I G+
Sbjct: 94 AGNSNLAREIFFATPL-----------------------------GIRDTVCYNAMITGY 124
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI-NDFRLGLSVFGLIFKAGFEKH 218
N F A++LF LL +G +P+ TF+S+ A A I D + + + K+G
Sbjct: 125 SHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFV 184
Query: 219 VSVCNSLITLSLKMGE---------VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
SV N+L+++ +K + AR +FD M +RD +SWT ++ ++ G+L A
Sbjct: 185 TSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAA 244
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R+ D M E+ V+W+ MI+ Y G+ EA +FR+M + + ++ VLSA A+
Sbjct: 245 RQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANA 304
Query: 330 KALRSGMHVHAHVLKI----GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
G VHA++L+ ++ + ++NAL LY KCG+ + R VF+ + KD+
Sbjct: 305 GFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDL--- 361
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN+++ GY G+++EAK F+ MP+RN ++W+ +ISG ++ + +FN M
Sbjct: 362 VSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSE 421
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G P F+ + A A +A+L G+ LH ++++LGF + G AL YAK G +E++
Sbjct: 422 GFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAA 481
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+F MP + +SW M+ L + G+ +++ LFE M K I P+ +T L+VL CSH+
Sbjct: 482 HCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHA 541
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV++G +YF SM +Y I P HY ++D+L R+G+ SEA+D I +MP EP W +
Sbjct: 542 GLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEA 601
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL+GC+ + N + +A + L++L +H YVLLSN+YA+ GRW D VRKLM +KG+
Sbjct: 602 LLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGV 661
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K GCSW+EV N+VH F +P+
Sbjct: 662 KKEPGCSWIEVENKVHVFLVDDIVHPE 688
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/503 (25%), Positives = 233/503 (46%), Gaps = 76/503 (15%)
Query: 187 FSSICKACAEIN--DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
+++ + C N + + +V + +GF+ + N LI + K ++ A +FD
Sbjct: 16 YAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDE 75
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE--RNEVSWSVMIARYNQSGYPEEAFR 302
+ + D+V+ T ++ G+ AR IF P R+ V ++ MI Y+ + A
Sbjct: 76 IRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIE 135
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASL-KALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LFR + R F+P+ F+ VL ALA + + + +H V+K G + NAL+ ++
Sbjct: 136 LFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVF 195
Query: 362 SKCGETKD---------GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
KC + R +FD + E+D +SW +MI GY NG+++ A++ D M
Sbjct: 196 VKCASSPLVSSSSLMAAARKLFDEMTERD---ELSWTTMIAGYVRNGELDAARQFLDGMT 252
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
++ V+W+A+ISGY+ H F +F +M L G ++ T++SVL A A+ GK
Sbjct: 253 EKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQ 312
Query: 473 LHGKIIKL----GFPYDVFLGTALTDTYAKSGDIESSRRVFDR----------------- 511
+H I++ + + + AL Y K G ++ +R+VF++
Sbjct: 313 VHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYV 372
Query: 512 --------------MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
MP++N ++WTVM+ GLA++G+ +ES+ LF M+ P +
Sbjct: 373 NAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAG 432
Query: 558 VLFACS-----------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ AC+ H+ LV G F+S N ++ M ++ G +
Sbjct: 433 AIIACAWLAALMHGRQLHAQLVRLG---FDSSLSAGN---------ALITMYAKCGVVEA 480
Query: 607 AEDFINSMPFEPDSNAWASLLSG 629
A +MP+ DS +W ++++
Sbjct: 481 AHCLFLTMPY-LDSVSWNAMIAA 502
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 173/417 (41%), Gaps = 92/417 (22%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKT----GIHKERYLTTRLLIMYLGS 69
E ++ S + C + + G+ +H ++++T + + L +Y
Sbjct: 291 EFTYTSVLSAC-------ANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKC 343
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
K EA ++ + DLV N +++ + G ++EA+ F+ MPERN ++WT +ISG
Sbjct: 344 GKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLA 403
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
++G F E+LKLF ++ G +P + F+
Sbjct: 404 QNG-------------------------------FGEESLKLFNRMKSEGFEPCDYAFAG 432
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
ACA + G + + + GF+ +S N+LIT+ K G V+ A +F M D
Sbjct: 433 AIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLD 492
Query: 250 VVSWTVILDVFIEMGDLGEARRIF------DEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
VSW ++ + G +A +F D +P+R +++ +++ + +G EE R
Sbjct: 493 SVSWNAMIAALGQHGHGAQALELFELMLKEDILPDR--ITFLTVLSTCSHAGLVEEGHRY 550
Query: 304 FRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F+ M+ Y P ++ +IDL
Sbjct: 551 FKSMSGLYGICPGEDHYA-----------------------------------RMIDLLC 575
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM----EEAKELFDNMPKRN 415
+ G+ + + + +++ + + W +++ G ++G M + A+ LF+ MP+ +
Sbjct: 576 RAGKFSEAKDMIETMPVEPGPPI--WEALLAGCRIHGNMDLGIQAAERLFELMPQHD 630
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/635 (34%), Positives = 357/635 (56%), Gaps = 35/635 (5%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+K L + ++N +INA + GN+ A+ +FD MP+ N SW ++S + K G +
Sbjct: 31 IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTM 90
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFSSICKACAE 196
F P ++ +SW + I G+V G EA+K + +++ GV N +TFS++ +
Sbjct: 91 QEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSS 150
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
LG + G I K GF +V V +SL+ + KMG V +A VFD +++R+VV + +
Sbjct: 151 QGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTM 210
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + G + +++R+F M ER+ +SW+ MI Q+G EA LFR M + +
Sbjct: 211 ITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQ 270
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F VL+A L+AL+ G +H +++ G +VF+ +AL+D+Y KC +
Sbjct: 271 YTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVR-------- 322
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
A+ +F M +N VSW+A++ GY ++ +
Sbjct: 323 --------------------------YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAV 356
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
VF +M +G P+ T SV+ + A++ASLE+G H + + G + + AL Y
Sbjct: 357 RVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLY 416
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K G IE S ++FD M ++E+SWT +V G A+ G A E+I+LFE M + P+ +T +
Sbjct: 417 GKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFI 476
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
+VL ACS +GLV++G +YF SM + I P HYTC++D+ R+GRL EA++FIN MPF
Sbjct: 477 AVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPF 536
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
PDS WA+LLS C+ Y NE+I + A ++L +L ++PAGY+LLS+IYA+ G+W + +
Sbjct: 537 SPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQL 596
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R+ M EKG RK G SW++ +++V+ F +P
Sbjct: 597 RRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSP 631
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 242/450 (53%), Gaps = 8/450 (1%)
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
K C E + + LI K+ + N+LI K+G + AR VFD+M + +
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW +L + + GDL + IF MP R+ VSW+ +I+ Y G EA + + M +
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 312 -FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
N FS +L ++S + G +H ++K G VF+ ++L+D+Y+K G
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
VFD + E++ VV +N+MI G +G ++++K LF M +R+ +SW+ +I+G +++
Sbjct: 193 SQVFDEVQERN---VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNG 249
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+F +M G ++ TF SVL A + +L++GK++H II+ G+ ++VF+G+
Sbjct: 250 LEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGS 309
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D Y K + + VF RM +KN +SWT M+ G ++G+++E++ +F +M++ I P
Sbjct: 310 ALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEP 369
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
++ T+ SV+ +C++ +++G + F+ + + ++ + + G + ++
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQL 428
Query: 611 INSMPFEPDSNAWASLLSGCKTY--KNEQI 638
+ M F D +W +L+SG + NE I
Sbjct: 429 FDEMSFR-DEVSWTALVSGYAQFGKANETI 457
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 261/576 (45%), Gaps = 95/576 (16%)
Query: 3 ASLRSLFSINPE---TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLT 59
++++ +FSI P S+NS I +C V++ + ++K G+ +T
Sbjct: 88 STMQEIFSIMPNRDGVSWNSLISGYVCY-------GSVVEAVKTYNSMMKDGVLNLNRIT 140
Query: 60 TRLLIMYLGSRKSLEAN-----EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP 114
+++ + S+ ++ +IVK G + V + +++ + G + A ++FD +
Sbjct: 141 FSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQ 200
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
ERN V + +I+G ++ G V++S F ++ ISWT I G +QNG EA+ LF
Sbjct: 201 ERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRD 260
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ + G+ ++ TF S+ AC + + G + LI ++G+ +V V ++L+ + K
Sbjct: 261 MRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRS 320
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
V A +VF RM ++VVSWT +L Y Q+
Sbjct: 321 VRYAEAVFKRMANKNVVSWTAML-------------------------------VGYGQN 349
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G+ EEA R+F M R +P+ V+S+ A+L +L G H L G+ + +S
Sbjct: 350 GFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVS 409
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NALI LY KCG +D +FD + +D VSW +++ GY G+ E +LF+
Sbjct: 410 NALITLYGKCGSIEDSNQLFDEMSFRD---EVSWTALVSGYAQFGKANETIDLFE----- 461
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
ML+ G P+ TF +VL A + +E+G+
Sbjct: 462 --------------------------RMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYF 495
Query: 475 GKIIKLG--FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVR-----G 526
++K P+ T + D + ++G +E ++ ++MP + I W ++ G
Sbjct: 496 ESMLKDHGIIPFSDHY-TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Query: 527 LAESG-YAKESINLFEEMEKTSITPNELTILSVLFA 561
E G +A ES+ +E P +LS ++A
Sbjct: 555 NEEIGKWAAESL-----LELDPQNPAGYILLSSIYA 585
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 167/345 (48%), Gaps = 52/345 (15%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+H ++K + F+ N LI+ YSK G R VFD + + + SWN+M+ Y
Sbjct: 27 LHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPN---SFSWNTMLSAYSK 83
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSS 456
+G + +E+F MP R+ VSW+++ISGY+ + +N M+ G + N+ TFS+
Sbjct: 84 SGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK------------------ 498
+L +S ++ G+ +HG+I+K GF VF+G++L D YAK
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN 203
Query: 499 -------------SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
SG ++ S+R+F M +++ ISWT M+ GL ++G E+++LF +M +
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN--IKPNGRHY----TCVVDMLS 599
+ ++ T SVL AC GL+ + I+ I+ H + +VDM
Sbjct: 264 EGMAMDQYTFGSVLTACG-------GLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYC 316
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + AE M + +W ++L G Y +E AV+
Sbjct: 317 KCRSVRYAEAVFKRMA-NKNVVSWTAMLVG---YGQNGFSEEAVR 357
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/687 (33%), Positives = 370/687 (53%), Gaps = 67/687 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK + + + LH H+IKT + E +L
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLL--------------------------- 47
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
N +I++ + G++ A ++FD MP N SW ++S + K GRV E + F+ P
Sbjct: 48 ----NNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPR 103
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLL--ESGVKPNEVTFSSICKACAEINDFRLGL 204
++ +SW + I G+ G ++++K + +L + N +TFS++ ++ +LG
Sbjct: 104 RDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGR 163
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ G + K GF +V V + L+ + KMG + AR VFD + +++VV + ++ + G
Sbjct: 164 QIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCG 223
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ +++R+F EM ER+ +SW+ MI + Q+G +A +FR+M + + + F VL+
Sbjct: 224 RVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLT 283
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + AL+ G VHA++++ + ++F+++AL+D+Y KC K VF + K+
Sbjct: 284 ACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKN--- 340
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VVSW +M+ GYG NG EEA + F +M K
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKY------------------------------ 370
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G P+ T SV+ + A++ASLE+G H + + G + + AL Y K G IE
Sbjct: 371 -GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 429
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
S R+F+ + K+E++WT +V G A+ G A E+I LFE M + P+++T + VL ACS
Sbjct: 430 SHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR 489
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+GLV+KG + F SM + I P HYTC++D+ SR+GR+ EA +FIN MPF PD+ +WA
Sbjct: 490 AGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWA 549
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS C+ Y N I + A + L +L + A YVLLS++YA+ G+W + +RK M +KG
Sbjct: 550 TLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKG 609
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LRK GCSW++ +NQVH F NP
Sbjct: 610 LRKEPGCSWIKYKNQVHVFSADDKSNP 636
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 243/445 (54%), Gaps = 7/445 (1%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+ ++ K C E ++F ++ I K + N+LI+ K+G + A VFD+M
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
++ SW IL + ++G + E +FD MP R+ VSW+ +I+ Y G ++ + +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 307 MTRY--SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
M + SF N FS +L + ++ G +H HV+K G VF+ + L+D+YSK
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G R VFD + EK+ VV +N++I G G++E++K LF M +R+ +SW+++I+
Sbjct: 192 GMISCARKVFDELPEKN---VVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMIT 248
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
G+ ++ +F EM L ++ TF SVL A V +L++GK +H II+ +
Sbjct: 249 GFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKD 308
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
++F+ +AL D Y K +I+S+ VF +M KN +SWT M+ G ++GY++E++ F +M+
Sbjct: 309 NIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 368
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
K I P++ T+ SV+ +C++ +++G + F++ + +V + + G +
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSI 427
Query: 605 SEAEDFINSMPFEPDSNAWASLLSG 629
++ N + F+ D W +L+SG
Sbjct: 428 EDSHRLFNEISFK-DEVTWTALVSG 451
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 229/519 (44%), Gaps = 110/519 (21%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+ SFN T LL + + V GR +HGH++K G ++ + L+ MY
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMIS 195
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
A ++ +L ++V++N +I ++ G +E+++RLF M ER+ +SWT++I+G
Sbjct: 196 CARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG------ 249
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
F QNG +A+ +F ++ ++ ++ TF S+ A
Sbjct: 250 -------------------------FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTA 284
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C + + G V I + ++ ++ V ++L+ + K + A +VF +M ++VVSW
Sbjct: 285 CGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSW 344
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T M+ Y Q+GY EEA + F M +Y +
Sbjct: 345 T-------------------------------AMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ V+S+ A+L +L G HA L G+ + +SNAL+ LY KCG +D +
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F+ I KD V+W +++ GY G+ E LF++
Sbjct: 434 FNEISFKD---EVTWTALVSGYAQFGKANETIGLFES----------------------- 467
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL-------HGKIIKLGFPYDV 486
ML G P+K TF VL A + +EKG + HG I+ + Y
Sbjct: 468 --------MLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHG-IVPIQDHY-- 516
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
T + D ++++G IE +R ++MP + ISW ++
Sbjct: 517 ---TCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLL 552
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/704 (33%), Positives = 382/704 (54%), Gaps = 53/704 (7%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
LC ++++S +L R +HGH+I +G ++ RL+ +Y S
Sbjct: 20 LCCPQNLSSYSL---ARTVHGHVIASGFKLRGHIVNRLIDIYWKSS-------------- 62
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D V A++LFD +P+ + ++ T LI+ + G ++ + F
Sbjct: 63 -DFVY----------------ARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNET 105
Query: 145 PF--QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI-NDFR 201
P ++ + + A I G+ A++LF + + +P++ TF+S+ A I D R
Sbjct: 106 PLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDER 165
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL---------ARSVFDRMEKRDVVS 252
+ G + K G E +V N+L+++ +K L AR +FD M KR+
Sbjct: 166 QCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFI 225
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
WT ++ ++ GDL AR I D M E+ ++W+ MI+ Y G E+A LFR+M
Sbjct: 226 WTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGV 285
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFIS--NALIDLYSKCGETK 368
+ + S ++ V+SA A G VHA++LK + ++D +S N LI LY K G+
Sbjct: 286 QVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVD 345
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
R +F + KD+ ++WN+++ GY G+MEEAK F MP++N ++W+ +ISG +
Sbjct: 346 GARKIFYEMPVKDI---ITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQ 402
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ + +FN+M L G PN F+ + A + + +LE G+ LH +I+ LG + +
Sbjct: 403 NGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSV 462
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G A+ YA+ G +E++R +F MP + +SW M+ L + G+ ++I L+E+M K I
Sbjct: 463 GNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGI 522
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+ T L+VL ACSH+GLV++G +YFNSM Y I P HY ++D+ R+G+ S+A+
Sbjct: 523 LPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAK 582
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ I+SMPFE + W +LL+GC+T+ N + A + L+KL +H YVLLSN+YAS G
Sbjct: 583 NVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLG 642
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
RW D RKLM ++G++K CSW EV N+VH F +P+
Sbjct: 643 RWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPE 686
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 236/496 (47%), Gaps = 63/496 (12%)
Query: 187 FSSICKACAE-INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
F+ + C + ++ + L +V G + +GF+ + N LI + K + AR +FD +
Sbjct: 15 FAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEI 74
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEAFRL 303
+ DV++ T ++ + +G+L AR IF+E P R+ V ++ MI Y+ A L
Sbjct: 75 PQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIEL 134
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASL-KALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
FR M +F+P+ F+ VLSA + R +H V+K GIE + NAL+ +Y
Sbjct: 135 FRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYV 194
Query: 363 KCGET---------KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
KC + R +FD + +++ W ++I GY NG + A+E+ D M +
Sbjct: 195 KCASSPLVSSSSLMASARKLFDEMPKRN---EFIWTTLITGYVRNGDLTGAREILDTMTE 251
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
+ ++W+A+ISGYL H F+ +F +M L G ++ST++SV+ A A GK +
Sbjct: 252 QPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQV 311
Query: 474 HGKIIK-------------------LGFPY----------------DVFLGTALTDTYAK 498
H I+K L + Y D+ L Y
Sbjct: 312 HAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVN 371
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
+G +E ++ F +MP+KN ++WTVM+ GLA++G+ ++++ LF +M+ PN+
Sbjct: 372 AGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGA 431
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT-----CVVDMLSRSGRLSEAEDFINS 613
+ ACS G ++ G + + + G T ++ M +R G + A +
Sbjct: 432 ITACSVLGALENGRQLHAQIVHL------GHDSTLSVGNAMITMYARCGIVEAARTMFLT 485
Query: 614 MPFEPDSNAWASLLSG 629
MPF D +W S+++
Sbjct: 486 MPF-VDPVSWNSMIAA 500
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 174/411 (42%), Gaps = 80/411 (19%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKER----YLTTRLLIMYLGS 69
E+++ S I C + G+ +H +++K ++ +R + L+ +Y
Sbjct: 289 ESTYTSVISAC-------ADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKY 341
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
K A +I ++ D++ N +++ + G +EEA+ F MPE+N ++WT +IS
Sbjct: 342 GKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMIS--- 398
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
G QNGF +ALKLF ++ G +PN+ F+
Sbjct: 399 ----------------------------GLAQNGFGEQALKLFNQMKLDGYEPNDYAFAG 430
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
AC+ + G + I G + +SV N++IT+ + G V+ AR++F M D
Sbjct: 431 AITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVD 490
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
VS W+ MIA Q G+ +A L+ QM +
Sbjct: 491 PVS-------------------------------WNSMIAALGQHGHGVKAIELYEQMLK 519
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETK 368
P+ F VLSA + + G +L+ GI +IDL+ + G+
Sbjct: 520 EGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFS 579
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM----EEAKELFDNMPKRN 415
D + V DS+ + A + W +++ G +G M E A++LF +P+ +
Sbjct: 580 DAKNVIDSMPFEARAPI--WEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD 628
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 358/624 (57%), Gaps = 17/624 (2%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP--FQNVISWTAAICG 158
G+L A LF P V+ T+L++ + GR+ ++ +F+ P ++ + A I
Sbjct: 73 GDLPAAATLFRADP--CPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISA 130
Query: 159 FVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDF--RLGLSVFGLIFKAGF 215
+ + + A+ +F LL SG ++P++ +F+++ A + + R + + K+G
Sbjct: 131 YARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGA 190
Query: 216 EKHVSVCNSLITLSLKMGEVDL---ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
+SV N+L+ L +K ++ AR V D M +D ++WT ++ ++ GD+G AR +
Sbjct: 191 GGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSV 250
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
F+E+ + +V W+ MI+ Y SG EAF LFR+M + F+ VLSA A+
Sbjct: 251 FEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFF 310
Query: 333 RSGMHVHAHVLKIGI----EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
G VH + ++ E + ++NAL+ LYSKCG R +FD++ KDV VSW
Sbjct: 311 AHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDV---VSW 367
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+++ GY + +++A E+F+ MP +N++SW ++SGY+ + +FN M
Sbjct: 368 NTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVK 427
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P T++ + A + SL+ GK LHG +++LGF G AL YA+ G ++ + +
Sbjct: 428 PCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLM 487
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F MP+ + +SW M+ L + G+ +E++ LF+ M I P+ ++ L+VL AC+HSGLV
Sbjct: 488 FLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLV 547
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
D+G +YF SM+ + I P HYT ++D+L R+GR+ EA D I +MPFEP + W ++LS
Sbjct: 548 DEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
GC+T + ++ A L+K+ +H Y+LLSN Y++AGRW+DA VRKLM ++G++K
Sbjct: 608 GCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKE 667
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
GCSW+E N+VH F +P+
Sbjct: 668 PGCSWIEAGNKVHVFVVGDTKHPE 691
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 231/484 (47%), Gaps = 53/484 (10%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRK---SLEANEIVKDLNGFDLVVHNCMINANIQ 99
L ++K+G ++ L+ +Y+ + +A +++ ++ D + M+ ++
Sbjct: 181 LQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVR 240
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G++ A+ +F+ + + +V W A+ISG+
Sbjct: 241 RGDVGAARSVFEEVDVKFDVVWNAMISGY------------------------------- 269
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI--FKAGF-- 215
V +G EA +LF +++ V +E TF+S+ ACA F G SV G I + F
Sbjct: 270 VHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVP 329
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
E + V N+L+TL K G + +AR +FD M+ +DVVSW IL ++E L +A +F+E
Sbjct: 330 EAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEE 389
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MP +NE+SW VM++ Y G+ E+A +LF +M KP ++ +SA L +L+ G
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHG 449
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H H++++G E NALI +Y++CG K+ L+F + D VSWN+MI
Sbjct: 450 KQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNID---SVSWNAMISAL 506
Query: 396 GLNGQMEEAKELFDNM------PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEI 448
G +G EA ELFD M P R +S+ +++ D F F M G I
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDR--ISFLTVLTACNHSGLVDEGFQYFESMKRDFGII 564
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P + ++ ++ + + +DL I + F + A+ SGD+E
Sbjct: 565 PGEDHYTRLIDLLGRAGRIGEARDL---IKTMPFEPTPSIWEAILSGCRTSGDMELGAHA 621
Query: 509 FDRM 512
D++
Sbjct: 622 ADQL 625
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 157/340 (46%), Gaps = 50/340 (14%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V+N ++ + GN+ A+R+FD M ++ VSW ++SG+++ +++++ FE P+
Sbjct: 333 LPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPY 392
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N +SW + G+V GFS +ALKLF ++ VKP + T++ AC E+ + G +
Sbjct: 393 KNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQL 452
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + + GFE S N+LIT+ + G V A +F M D VSW ++ + G
Sbjct: 453 HGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHG 512
Query: 267 GEARRIFDEM------PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA +FD M P+R +S+ ++ N SG +E F+ F M R + P +
Sbjct: 513 REALELFDRMVAEGIYPDR--ISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY 570
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ LIDL + G + R + ++
Sbjct: 571 T-----------------------------------RLIDLLGRAGRIGEARDLIKTMPF 595
Query: 380 KDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRN 415
+ + W +++ G +G ME A +LF P+ +
Sbjct: 596 EPTPSI--WEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/619 (35%), Positives = 368/619 (59%), Gaps = 21/619 (3%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V N I +++ G + A RLF+ MP R+ +SW A+ISG + + + + FE+ P
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++++SW I G V+ A LF ++ E V V+++++ A+ +
Sbjct: 108 TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDV----VSWNAMLSGYAQNGYVKEAKE 163
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+F + K+ N ++ ++ G ++ AR +F+ +++SW ++ +++
Sbjct: 164 IFDEMPC----KNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNR 219
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L +AR IFD MPER+EVSW+ MI+ Y Q+G EA RLF + P F+ +A
Sbjct: 220 LVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE------SPVRDVFT--WTA 271
Query: 326 LASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ S +++GM A + G+ EK+ NA+I Y +C R +F+++ ++V+
Sbjct: 272 MVS-GYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVS- 329
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
SWN+MI GY NG + +A+ FD MP+R+ +SW+AII+GY + + +F EM
Sbjct: 330 --SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKR 387
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
GE N+STF+S L A +A+LE GK +HG+++K G ++G AL Y K G+I+
Sbjct: 388 DGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDD 447
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ VF+ + +K +SW M+ G A G+ KE++ LFE M+KT I P+++T++ VL ACSH
Sbjct: 448 AYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSH 507
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+GLVDKG +YF SM Y I N +HYTC++D+L R+GRL +A++ + +MPFEPD+ W
Sbjct: 508 TGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWG 567
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL + + N ++ E+A K ++++ ++ YVLLSN+YA++GRW D +R M ++G
Sbjct: 568 ALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRG 627
Query: 685 LRKSGGCSWVEVRNQVHFF 703
++K G SWVEV+N++H F
Sbjct: 628 VKKVPGYSWVEVQNKIHTF 646
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 170/634 (26%), Positives = 284/634 (44%), Gaps = 110/634 (17%)
Query: 2 KASLRSLFSIN-----PETSFNSYIETCLCLLKDITSQNLVIQGRALHGH------LIKT 50
++ LRSL + P T + L DI N+ I +G L +
Sbjct: 15 RSCLRSLQTTTTANRKPSTRNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNS 74
Query: 51 GIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF 110
+ ++ L + K A ++ + + DLV N MI+ +++ NL A+ LF
Sbjct: 75 MPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLF 134
Query: 111 DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALK 170
D MPER+ VSW A++SG+ ++G V+E+ F+ P +N ISW + +VQNG +A +
Sbjct: 135 DQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARR 194
Query: 171 LFLK-----------LLESGVKPN----------------EVTFSSICKACAEINDFRLG 203
LF ++ VK N EV+++++ A+ +
Sbjct: 195 LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEA 254
Query: 204 LSVF---------------------GLI------FKAGFEKHVSVCNSLITLSLKMGEVD 236
+F G++ F EK+ N++I ++ +D
Sbjct: 255 QRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMD 314
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
AR +F+ M ++V SW ++ + + GD+ +AR FD MP+R+ +SW+ +IA Y QSGY
Sbjct: 315 QARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGY 374
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EEA LF +M R + N S F+ LS A + AL G VH V+K G+E ++ NA
Sbjct: 375 GEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNA 434
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
L+ +Y KCG D +VF+ I EK+ VVSWN+MI GY +G +EA LF++M K
Sbjct: 435 LLVMYCKCGNIDDAYIVFEGIEEKE---VVSWNTMIAGYARHGFGKEALMLFESMKK--- 488
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD-LHG 475
+G +P+ T VL A + ++KG + +
Sbjct: 489 ----------------------------TGILPDDVTMVGVLSACSHTGLVDKGTEYFYS 520
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVM-----VRGLAE 529
G + T + D ++G ++ ++ + MP + + +W + + G E
Sbjct: 521 MTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTE 580
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
G +++ + EME + +LS L+A S
Sbjct: 581 LG--EKAAKMIFEMEPDN--SGMYVLLSNLYAAS 610
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 51/248 (20%)
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
A +V WN I + NGQ + A LF++MP+R+ +SW+A+ISG L + +F L +F +M
Sbjct: 47 ADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM 106
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
P + S + S V + ++
Sbjct: 107 ------PTRDLVSWNVMISGCV---------------------------------RYRNL 127
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME-KTSITPNELTILSVLFA 561
++R +FD+MP+++ +SW M+ G A++GY KE+ +F+EM K SI+ N +L A
Sbjct: 128 RAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWN-----GMLAA 182
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
+G ++ + F S I N C++ + RL +A + MP E D
Sbjct: 183 YVQNGRIEDARRLFESKADWELISWN-----CMMGGYVKRNRLVDARGIFDRMP-ERDEV 236
Query: 622 AWASLLSG 629
+W +++SG
Sbjct: 237 SWNTMISG 244
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 338/578 (58%), Gaps = 3/578 (0%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
F K GR+ ++ F P ++ +SWT + G + G EA+K L + G P + T
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+++ +CA +G V + K G V V NS++ + K G+ + A +VF+RM
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF-RQ 306
R V SW ++ + +G + A +F+ MP+R+ VSW+ MIA YNQ+G +A +LF R
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
+ S P+ + VLSA A+L +R G VHA++L+ + + ++NALI Y+K G
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 241
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
++ R + D +E D+ +V+S+ +++ GY G ME A+E+F M R+ V+W+A+I GY
Sbjct: 242 VENARRIMDQSMETDL-NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
++ + D +F M+ G PN T ++VL AS+A L+ GK +H + I+
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAESGYAKESINLFEEMEK 545
+ A+ YA+SG +RR+FD++ + E I+WT M+ LA+ G +E++ LFEEM +
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P+ +T + VL ACSH+G V++G +Y++ ++ + I P HY C+VD+L+R+G S
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EA++FI MP EPD+ AW SLLS C+ +KN ++AE A + L + + Y ++N+Y+
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+ GRW DA + K EK +RK G SW +R+++H F
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVF 578
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 154/540 (28%), Positives = 257/540 (47%), Gaps = 85/540 (15%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+VK G + V N ++N + G+ E A +F+ MP R+ SW A++S GR++ +
Sbjct: 84 VVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLA 143
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAE 196
FE P ++++SW A I G+ QNG +ALKLF ++L ES + P+E T +S+ ACA
Sbjct: 144 ESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACAN 203
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD--VVSWT 254
+ + R+G V I + + V N+LI+ K G V+ AR + D+ + D V+S+T
Sbjct: 204 LGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFT 263
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+L+ ++++GD+ AR +F M R+ V+W+ MI Y Q+G +EA LFR M +P
Sbjct: 264 ALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP 323
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N+ + VLS ASL L G +H ++ +E+ +SNA+I +Y++ G R +F
Sbjct: 324 NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMF 383
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D + + ++W SMI +GQ EEA LF+
Sbjct: 384 DQVCWRK--ETITWTSMIVALAQHGQGEEAVGLFE------------------------- 416
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
EML +G P++ T+ VL A + + +GK
Sbjct: 417 ------EMLRAGVEPDRITYVGVLSACSHAGFVNEGK----------------------- 447
Query: 495 TYAKSGDIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAKESINLFEEMEKTSIT 549
R +D++ ++++I+ + MV LA +G E+ M +
Sbjct: 448 ------------RYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVE 492
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFN-SMEPIYNIKPNGR-HYTCVVDMLSRSGRLSEA 607
P+ + S+L AC V K + + E + +I PN Y+ + ++ S GR S+A
Sbjct: 493 PDAIAWGSLLSACR----VHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 548
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 208/403 (51%), Gaps = 38/403 (9%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+F + G L +AR +F EMPER+ VSW+VM+ N++G EA + MT F P
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ VLS+ A +A G VH+ V+K+G+ V ++N+++++Y KCG+++ VF+ +
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM- 119
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
V V SWN+M+ G+M+ A+ LF++MP R+ VSW+A+I+GY ++ +
Sbjct: 120 --PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 177
Query: 439 FNEMLL-SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
F+ ML S P++ T +SVL A A++ ++ GK +H I++ Y+ + AL TYA
Sbjct: 178 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 237
Query: 498 KSGDIESSRRVFDR---------------------------------MPDKNEISWTVMV 524
KSG +E++RR+ D+ M +++ ++WT M+
Sbjct: 238 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 297
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G ++G E+I+LF M PN T+ +VL C+ +D G K + +
Sbjct: 298 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYG-KQIHCRAIRSLL 356
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ + ++ M +RSG A + + + ++ W S++
Sbjct: 357 EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMI 399
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 194/399 (48%), Gaps = 31/399 (7%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER--NEVSWTALISGFMKHGRVE 135
I++ ++ V N +I+ + G++E A+R+ D E N +S+TAL+ G++K G +E
Sbjct: 217 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 276
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
+ F ++V++WTA I G+ QNG + EA+ LF ++ G +PN T +++ CA
Sbjct: 277 SAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 336
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWT 254
+ G + ++ E+ SV N++IT+ + G AR +FD++ +++ ++WT
Sbjct: 337 SLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 396
Query: 255 VILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TR 309
++ + G EA +F+EM E + +++ +++ + +G+ E R + Q+
Sbjct: 397 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNE 456
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCGET 367
+ P S ++ ++ LA R+G+ A + ++ +E D +L+
Sbjct: 457 HQIAPEMSHYACMVDLLA-----RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNA 511
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF-----DNMPKRNDVSWSAI 422
+ L + ++ D + +++++ Y G+ +A ++ + K SW+ I
Sbjct: 512 ELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHI 571
Query: 423 ISGY-------LEHKQFDLVFA----VFNEMLLSGEIPN 450
S + H Q D V+A ++ E+ +G +P+
Sbjct: 572 RSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPD 610
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 357/623 (57%), Gaps = 17/623 (2%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF--QNVISWTAAICGF 159
+L A LF P VS T+L++ + R+ ++ +F+ P ++ + A I +
Sbjct: 74 DLPAAATLFCADP--CPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAY 131
Query: 160 VQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDF--RLGLSVFGLIFKAGFE 216
+ + A+ +F LL SG ++P++ +F+++ A + + R + + K+G
Sbjct: 132 ARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAG 191
Query: 217 KHVSVCNSLITLSLKMGEVDL---ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF 273
+SVCN+L+ L +K + AR V D M +D ++WT ++ ++ GD+G AR +F
Sbjct: 192 GALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVF 251
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
+E+ + +V W+ MI+ Y SG EAF LFR+M + F+ VLSA A++
Sbjct: 252 EEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFA 311
Query: 334 SGMHVHAHVLKIGI----EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
G VH ++++ E + ++NAL+ YSKCG R +FD++ KDV VSWN
Sbjct: 312 HGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDV---VSWN 368
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+++ GY + +++A E+F+ MP +N++SW ++SGY+ + +FN+M P
Sbjct: 369 TILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKP 428
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
T++ + A + +L+ GK LHG I++LGF G AL YA+ G ++ + +F
Sbjct: 429 CDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMF 488
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
MP+ + +SW M+ L + G+ +E++ LF+ M I P+ ++ L+VL AC+HSGLVD
Sbjct: 489 LVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVD 548
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+G +YF SM+ + I P HYT ++D+L R+GR+ EA D I +MPFEP + W ++LSG
Sbjct: 549 EGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+T + ++ A L+K+ +H Y+LLSN Y++AG W+DA VRKLM ++G++K
Sbjct: 609 CRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEP 668
Query: 690 GCSWVEVRNQVHFFFQKTDHNPK 712
GCSW+E N+VH F +P+
Sbjct: 669 GCSWIEAGNKVHVFLVGDTKHPE 691
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 232/484 (47%), Gaps = 53/484 (10%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYL---GSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
LH ++K+G + L+ +Y+ + +A +++ ++ D + M+ ++
Sbjct: 181 LHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVR 240
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G++ A+ +F+ + + +V W A+ISG +
Sbjct: 241 RGDVGAARSVFEEVDGKFDVVWNAMISG-------------------------------Y 269
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK--AGF-- 215
V +G + EA +LF +++ V +E TF+S+ ACA + F G SV G I + F
Sbjct: 270 VHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVP 329
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
E + V N+L+T K G + +AR +FD M +DVVSW IL ++E L +A +F+E
Sbjct: 330 EAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEE 389
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MP +NE+SW VM++ Y G+ E+A +LF +M + KP ++ ++A L AL+ G
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHG 449
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H H++++G E NALI +Y++CG K+ L+F + D VSWN+MI
Sbjct: 450 KQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNID---SVSWNAMISAL 506
Query: 396 GLNGQMEEAKELFDNM------PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEI 448
G +G EA ELFD M P R +S+ +++ D F F M G I
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDR--ISFLTVLTACNHSGLVDEGFRYFESMKRDFGII 564
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P + ++ ++ + + +DL I + F + A+ SGD+E
Sbjct: 565 PGEDHYTRLIDLLGRAGRIGEARDL---IKTMPFEPTPSIWEAILSGCRTSGDMELGAHA 621
Query: 509 FDRM 512
D++
Sbjct: 622 ADQL 625
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 50/340 (14%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V+N ++ + GN+ A+R+FD M ++ VSW ++SG+++ +++++ FE P+
Sbjct: 333 LPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPY 392
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N +SW + G+V GF+ +ALKLF K+ VKP + T++ AC E+ + G +
Sbjct: 393 KNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQL 452
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G I + GFE S N+LIT+ + G V A +F M D VSW ++ + G
Sbjct: 453 HGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHG 512
Query: 267 GEARRIFDEM------PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA +FD M P+R +S+ ++ N SG +E FR F M R + P +
Sbjct: 513 REALELFDRMVAEGIYPDR--ISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY 570
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ LIDL + G + R + ++
Sbjct: 571 T-----------------------------------RLIDLLGRAGRIGEARDLIKTMPF 595
Query: 380 KDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRN 415
+ + W +++ G +G ME A +LF P+ +
Sbjct: 596 EPTPSI--WEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/636 (32%), Positives = 371/636 (58%), Gaps = 18/636 (2%)
Query: 83 NGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
+GF ++ V N +I+ + G+L+EA+++ +GM +++ VSW ++I+ + +G V E++
Sbjct: 163 HGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDL 222
Query: 141 FERNPFQ----NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
E NV++W+A I GF N + E+++LF +++ +GV P+ T +S+ AC+
Sbjct: 223 LENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSR 282
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ +G + G I + + V N+L+ + + G++ A +F + ++ S+ +
Sbjct: 283 MKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTM 342
Query: 257 LDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
+ ++E G++G+A+ +F +M ER+ +SW+ MI+ + + ++A LFR +
Sbjct: 343 IVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGI 402
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+P++ +L+ A + +R G +H+ + G++ + F+ AL+++Y KC + ++
Sbjct: 403 EPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQM 462
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLE 428
FD I E+D + +WN++I GY Q+ + +EL + M + N +W++I++G +E
Sbjct: 463 AFDEISERDTS---TWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVE 519
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+KQ+DL +FNEM +S P+ T +L A + +A++ +GK +H I+ G+ D +
Sbjct: 520 NKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHI 579
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G L D YAK G I+ +V++++ + N + M+ A G+ +E I +F M + +
Sbjct: 580 GATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRV 639
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+ +T LSVL +C H+G + G + F ME YNI P +HYTC+VD+LSR+G+L EA
Sbjct: 640 RPDHVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPTLKHYTCMVDLLSRAGKLDEAY 698
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
I +MP E DS W++LL GC +K + E A + L +L + YVLL+N+YASAG
Sbjct: 699 QLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAG 758
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
RW D R+LM +KG++KS GCSW+E R+ VH F
Sbjct: 759 RWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFL 794
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 243/476 (51%), Gaps = 14/476 (2%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV- 180
T L+ + + E++ F++ +N+ SWTA + + G ++ LF + L G+
Sbjct: 70 TKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLG 129
Query: 181 -KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
K + F + C + D LG V G++ K GF +V V N+LI + K G +D A+
Sbjct: 130 EKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAK 189
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSG 295
V + M ++D VSW I+ + G + EA + + M E N V+WS +I ++ +
Sbjct: 190 KVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNA 249
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
Y E+ LF +M P+ + VL A + +K L G +H ++++ + + F++N
Sbjct: 250 YDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVAN 309
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK-- 413
AL+ +Y +CG+ K +F K A S+N+MI GY NG + +AKELF M +
Sbjct: 310 ALVGMYRRCGDMKSAFKIFSKFARKCAA---SYNTMIVGYLENGNVGKAKELFYQMEQEG 366
Query: 414 --RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
R+ +SW+ +ISG++++ FD +F ++L+ G P+ T S+L A + + +GK
Sbjct: 367 VERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGK 426
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H I G + F+G AL + Y K DI +++ FD + +++ +W ++ G A
Sbjct: 427 EIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCN 486
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ L E M+ PN T S+L + D ++ FN M+ + +++P+
Sbjct: 487 QIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQ-VSSLRPD 541
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 183/389 (47%), Gaps = 44/389 (11%)
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
T+S+I ++ N LG + K GF H V L+ + + A +FD+
Sbjct: 35 TTYSTILQSS---NSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDK 91
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M +++ SWT +L + + MG + +F+E + G E
Sbjct: 92 MTLKNLHSWTAVLRLHLNMGLFYKGFMLFEE---------------FLCDGLGE------ 130
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
K + F +VL+ L L G VH VLK G +V++ NALID+Y KC
Sbjct: 131 --------KLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKC 182
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWS 420
G + + V + + +KD VSWNS+I NG + EA +L +NM + N V+WS
Sbjct: 183 GSLDEAKKVLEGMTQKD---CVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWS 239
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+I G+ + +F M+ +G P+ T +SVL A + + L GK+LHG I++
Sbjct: 240 AVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRH 299
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
+ F+ AL Y + GD++S+ ++F + K S+ M+ G E+G ++ LF
Sbjct: 300 ELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELF 359
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVD 569
+ME+ + + ++ + C SG VD
Sbjct: 360 YQMEQEGVERDRIS-----WNCMISGHVD 383
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 37/279 (13%)
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ L S +L G +H+H +K G F+ L+ +YS
Sbjct: 39 TILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYS--------------------- 77
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+N E+A +FD M +N SW+A++ +L F F +F E L
Sbjct: 78 -------------INSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFL 124
Query: 444 LSG--EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
G E + F VL + LE G+ +HG ++K GF +V++G AL D Y K G
Sbjct: 125 CDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGS 184
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ +++V + M K+ +SW ++ +G E+++L E M + + PN +T +V+
Sbjct: 185 LDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGG 244
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
S + + ++ F M + P+ R V+ SR
Sbjct: 245 FSSNAYDVESVELFARMVGA-GVAPDARTLASVLPACSR 282
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
+T+S++L +S S L GK LH IK GF F+ T L Y+ + E + +FD+
Sbjct: 35 TTYSTILQSSNS---LTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDK 91
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP--NELTILSVLFACSHSGLVD 569
M KN SWT ++R G + LFEE + + VL C G ++
Sbjct: 92 MTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLE 151
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
G + + M + N ++DM + G L EA+ + M + D +W S+++
Sbjct: 152 LG-RQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMT-QKDCVSWNSIITA 209
Query: 630 C 630
C
Sbjct: 210 C 210
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/681 (33%), Positives = 372/681 (54%), Gaps = 51/681 (7%)
Query: 47 LIKTGIHKERYLT-----TRLLIMYLGSRKS----LEANEIVKDLNGFDLVVHNCMINAN 97
+ K G+ ++ YL +LL L SR + L I+ ++ + N +I+
Sbjct: 1 MAKHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY 60
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
+ L++A++LFD MP+RN +W +LIS K G ++E+ F P + SW + +
Sbjct: 61 GKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVS 120
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
GF Q+ E+L+ F+K+ NE +F S ACA + D +G V L+ K+ +
Sbjct: 121 GFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST 180
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
DV + ++D++ + G + A +F M
Sbjct: 181 -------------------------------DVYMGSALIDMYSKCGSVACAEEVFSGMI 209
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
ERN V+W+ +I Y Q+G EA +F +M +P+ + V+SA ASL AL+ G+
Sbjct: 210 ERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQ 269
Query: 338 VHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+HA V+K D+ + NAL+D+Y+KC + + R VFD + + +VVS SM+ GY
Sbjct: 270 IHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM---SIRNVVSETSMVSGYA 326
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
++ A+ +F M +RN VSW+A+I+GY ++ + + +F + P TF +
Sbjct: 327 RAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGN 386
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPY------DVFLGTALTDTYAKSGDIESSRRVFD 510
+L A A++A L G+ H ++K GF + D+F+G +L D Y K G IE RVF+
Sbjct: 387 LLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFE 446
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+M +++ +SW ++ G A++GY E++ +F +M P+ +T++ VL ACSH+GLV++
Sbjct: 447 KMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEE 506
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G YF SME + + P HYTC+VD+L R+G L+EA++ I +MP PD+ W SLL+ C
Sbjct: 507 GRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAAC 565
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
K + N ++ + A + L ++ + YVLLSN+YA GRW D + VRKLM ++G+ K G
Sbjct: 566 KVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPG 625
Query: 691 CSWVEVRNQVHFFFQKTDHNP 711
CSW+EV ++VH F K +P
Sbjct: 626 CSWIEVESRVHVFLVKDKSHP 646
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/630 (33%), Positives = 351/630 (55%), Gaps = 36/630 (5%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G D V +++ I+ G ++ AQ++F P + W ++I G+ K+G V++++ F +
Sbjct: 146 GIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAK 205
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P ++ +SW I Q+GF E L FL++ G +PN +T++S+ AC I D G
Sbjct: 206 MPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWG 265
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIE 262
+ I RME DV + ++D++ +
Sbjct: 266 AHLHARIV--------------------------------RMEPCLDVYAGCGLIDMYAK 293
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G L AR++FD + E N VSW+ +I Q+G+ EEA LF QM + + V
Sbjct: 294 CGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATV 353
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L S K + G +HAH + G++ V ++NAL+ +Y+KCG+ F+ + +D+
Sbjct: 354 LGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDI 413
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+SW +MI + G +E+A+E FD MP+RN +SW+++++ Y++ ++ V+ +M
Sbjct: 414 ---ISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQM 470
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L G + TFS+ + A A +A L G + + KLGF +V + ++ Y++ G I
Sbjct: 471 LREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQI 530
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
E ++++F + KN +SW M+ G A++G ++ I +FE+M P++++ +SVL C
Sbjct: 531 EEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGC 590
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SHSG V +G YF SM + I P H+ C+VD+L R+G+L +A++ IN MPF+P++
Sbjct: 591 SHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAI 650
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LL+ C+ + N ++AE AVKNL +L E P Y LL+NIY+ +G+ NVRKLM +
Sbjct: 651 WGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRD 710
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
KG+RK+ GCSW+EV N+VH F ++P+
Sbjct: 711 KGVRKNPGCSWIEVDNRVHVFTVDDTNHPQ 740
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/608 (27%), Positives = 280/608 (46%), Gaps = 70/608 (11%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
+K+ S + R LH LI G+ +L LL MY
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMY--------------------- 49
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
NC G + +A R+F G+ N SW +ISGF G++ E+ FE+ P +
Sbjct: 50 --SNC--------GLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPER 99
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+ +SW + + G+ NG + KA + +L L +
Sbjct: 100 DSVSWNSMMSGYFHNG----------------------ELEATIKASGSLGYLKLALQLH 137
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G K F V S++ + +K G +D A+ VF R + W ++ + + G +
Sbjct: 138 GFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVK 197
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A +F +MPER+ VSW+ MI+ +Q G+ E F +M F+PN+ ++ VLSA
Sbjct: 198 KALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACT 257
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
S+ L G H+HA ++++ DV+ LID+Y+KCG + R VFD + E + VS
Sbjct: 258 SIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHN---AVS 314
Query: 388 WNSMIGGYGLNGQMEEAKELFDNM---PKRND-VSWSAIISGYLEHKQFDLVFAVFNEML 443
W S+IGG G EEA LF+ M P +D + + ++ L K + E L
Sbjct: 315 WTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISI-----GEQL 369
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDL--HGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+ I + SSV A+A V K D+ +L D+ TA+ ++++GD
Sbjct: 370 HAHTI-TRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGD 428
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+E +R FD+MP++N ISW M+ + GY +E + ++ +M + + + +T + + A
Sbjct: 429 VEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISA 488
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+ ++ G + E + N VV M SR G++ EA+ +S+ + +
Sbjct: 489 CADLAVLILGNQILAQAEKL-GFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMK-NLV 546
Query: 622 AWASLLSG 629
+W ++++G
Sbjct: 547 SWNAMMAG 554
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 237/506 (46%), Gaps = 52/506 (10%)
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
K CA + + + + G + + + N L+ + G + A VF + +V
Sbjct: 12 KECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVY 71
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW ++ F + G + EA ++F++MPER+ VSW+ M++ Y +G E +
Sbjct: 72 SWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIK--------- 122
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
A SL L+ + +H K D + +++D+Y KCG +
Sbjct: 123 -------------ASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQ 169
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VF + WNSMI GY G +++A ELF MP+R+ VSW+ +IS +H
Sbjct: 170 KVF---CRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGF 226
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
F EM G PN T++SVL A S+ LE G LH +I+++ DV+ G
Sbjct: 227 GAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCG 286
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D YAK G +ES+R+VFD + + N +SWT ++ G+A++G+ +E++ LF +M + + +
Sbjct: 287 LIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASD 346
Query: 552 ELTILSVLFAC-----------SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ T+ +VL C H+ + +GL +S P+ N +V M ++
Sbjct: 347 QFTLATVLGVCLSQKDISIGEQLHAHTITRGL---DSSVPVAN---------ALVTMYAK 394
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
G + +A MP D +W ++++ + E+A + K+ E + + +
Sbjct: 395 CGDVWKANHAFELMPIR-DIISWTAMITA---FSQAGDVEKAREYFDKMPERNVISWNSM 450
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLR 686
Y G W + + V M +G++
Sbjct: 451 LATYMQRGYWEEGLKVYIQMLREGVK 476
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 178/337 (52%), Gaps = 9/337 (2%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ L A+ I + L+ + V N ++ + G++ +A F+ MP R+ +SWTA+I+ F +
Sbjct: 367 EQLHAHTITRGLDS-SVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQ 425
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G VE++ YF++ P +NVISW + + ++Q G+ E LK+++++L GVK + +TFS+
Sbjct: 426 AGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTS 485
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
ACA++ LG + K GF +VSV NS++T+ + G+++ A+ +F + +++
Sbjct: 486 ISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNL 545
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
VSW ++ + + G + IF++M +++S+ +++ + SG+ E F
Sbjct: 546 VSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLS 605
Query: 307 MTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
MT+ + P + F ++ L L ++ + ++ + + I AL+ G
Sbjct: 606 MTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNL---INQMPFKPNAAIWGALLAACRIHG 662
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
TK L +++E D S+ + Y +G+++
Sbjct: 663 NTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQ 699
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/665 (34%), Positives = 368/665 (55%), Gaps = 49/665 (7%)
Query: 60 TRLLIMYLGSRKSLEAN----EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE 115
+LL + S+ EA I+K ++ + N +++ + G LE+A+++FD M +
Sbjct: 23 AKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQ 82
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
RN SW A++ K G ++E++ F+ P ++ SW A + GF Q EAL+ + +
Sbjct: 83 RNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDM 142
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
NE +F S ACA + D +G+ + GLI K+ + +L + MG
Sbjct: 143 HSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRY-----------SLDVYMG-- 189
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
+ ++D++ + + A+R FD+M RN VSW+ +I Y Q+G
Sbjct: 190 ------------------SALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNG 231
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFIS 354
+A +F +M +P+ + V SA ASL A+R G+ +HA V+K D+ +
Sbjct: 232 PAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLG 291
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NAL+D+Y+KC + RLVFD + +DV VS SM+ GY ++ A+ +F NM +R
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMPLRDV---VSETSMVSGYAKASSVKAARLMFSNMMER 348
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI--PNKSTFSSVLCASASVASLEKGKD 472
N VSW+A+I+GY ++ + + +F +LL E P TF ++L A A++A L+ G+
Sbjct: 349 NVVSWNALIAGYTQNGENEEAVRLF--LLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406
Query: 473 LHGKIIKLGFPY------DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
H I+K GF + D+F+G +L D Y K G +E R VF+RM +++ +SW M+ G
Sbjct: 407 AHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVG 466
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
A++GY E++ +F EM + P+ +T++ VL ACSH+GLV++G YF SM + + P
Sbjct: 467 YAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVP 526
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
HYTC+VD+L R+G L EA + I +MP EPD+ W SLL+ CK + N + + + L
Sbjct: 527 VKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERL 586
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
++ + YVLLSN+YA GRW D + VRK M + G+ K GCSW+ +++ +H F K
Sbjct: 587 LEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVK 646
Query: 707 TDHNP 711
+P
Sbjct: 647 DKRHP 651
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 224/513 (43%), Gaps = 99/513 (19%)
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
V SF F KLL++ VK V + + V I K F +
Sbjct: 10 VVGDLSFLDSSPFAKLLDTCVKSKSVFEARL---------------VHARIIKTQFSSEI 54
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+ N L+ + K G ++ AR VFD M++R+ SW +L + G L EA +F MPER
Sbjct: 55 FIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPER 114
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
++ SW+ M++ + Q EEA R M F N F LSA A L L G+ +H
Sbjct: 115 DQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIH 174
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ K DV++ +AL+D+YSKC + FD + DV ++VSWNS+I Y NG
Sbjct: 175 GLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDM---DVRNIVSWNSLITCYEQNG 231
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+A E VF M+ G P++ T +SV
Sbjct: 232 PAGKALE-------------------------------VFVRMMNCGIEPDEITLASVAS 260
Query: 460 ASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP----- 513
A AS++++ +G +H +++K + D+ LG AL D YAK + +R VFDRMP
Sbjct: 261 ACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVV 320
Query: 514 --------------------------DKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
++N +SW ++ G ++G +E++ LF +++ S
Sbjct: 321 SETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRES 380
Query: 548 ITPNELTILSVLFAC-----------SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
I P T ++L AC +H+ ++ G +F S E N ++D
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGF-WFKSGEDSDIFVGNS-----LID 434
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
M + G + + M E D+ +W +++ G
Sbjct: 435 MYMKCGLVEDGRLVFERM-LERDNVSWNAMIVG 466
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 165/413 (39%), Gaps = 107/413 (25%)
Query: 32 TSQNLVIQGRALHGHLIKTGIHK-ERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVH 90
S + + +G +H ++K ++ + L L+ MY R+ EA + + D+V
Sbjct: 263 ASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSE 322
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
M++ + +++ A+ +F M ERN VSW ALI+G
Sbjct: 323 TSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAG----------------------- 359
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV---- 206
+ QNG + EA++LFL L + P TF ++ ACA + D +LG
Sbjct: 360 --------YTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHI 411
Query: 207 --FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
G FK+G + + V NSLI + +K G V+ R VF+RM +RD VSW
Sbjct: 412 LKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSW----------- 460
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ MI Y Q+GY EA +FR+M +P+
Sbjct: 461 --------------------NAMIVGYAQNGYGTEALEIFREMLVSGERPD--------- 491
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDVA 383
HV IG+ + S G ++GR F S+ +E +
Sbjct: 492 ----------------HVTMIGV----------LSACSHAGLVEEGRCYFQSMTIEHGLV 525
Query: 384 HVVS-WNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDL 434
V + M+ G G ++EA L MP D V W ++++ H L
Sbjct: 526 PVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITL 578
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/669 (34%), Positives = 364/669 (54%), Gaps = 40/669 (5%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
LK +S + + QGR +H + K G+H F+
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLH-------------------------------FNT 88
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+ N +IN + G+++ AQ LFDG + VS ++SG++++G+++ + F+ P +
Sbjct: 89 FIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNK 148
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+S+T I GFVQNGF EAL++F + GV PN++T ++ AC+ + + V
Sbjct: 149 GCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVH 208
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
GL+ K V V +L+ V AR +FD M +R++V+W V+L+ + + G +
Sbjct: 209 GLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVD 268
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
EAR +FD + +++ +SW MI Y Q G EA ++R M + PN ++SA
Sbjct: 269 EARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACG 328
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
A+ G +H V+K G + FI +I Y+ CG L F+ V+ H+ S
Sbjct: 329 RGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKD---HLES 385
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN++ G+ NG M+ A + FD M R+ SWS +ISGY + + + +F++ML G
Sbjct: 386 WNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGI 445
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN+ T SV A A++ +L++GK H + P++ L AL D YAK G I S+ +
Sbjct: 446 KPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQ 505
Query: 508 VFDRMPDKNEIS----WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
F+++ D E+S W ++ GLA G+A + +F +M++ I PN +T + VL AC
Sbjct: 506 FFNQIRD--EVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACC 563
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV+ G + F +M+ YN++P+ +HY C++D+L R+G L EAE+ I SMP E D W
Sbjct: 564 HAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIW 623
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL+ C+T+ N I ERA +NL +LA H G VLLSNIYA+AG+W + VR +M +
Sbjct: 624 GTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQ 683
Query: 684 GLRKSGGCS 692
+ + G S
Sbjct: 684 TMDREPGYS 692
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 244/499 (48%), Gaps = 36/499 (7%)
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+E+ S K+C+ ++ G + LIFK G + + NSLI + K G++ A+ +F
Sbjct: 52 SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D D VS +++ ++ G + AR++FD MP + VS++ MI + Q+G+ EA
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F+ M PN V+SA + L + + VH V+K+ + V +S L+ Y
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYC 231
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
C ++ R +FD + E++ +V+WN M+ GY G ++EA+ELFD + ++ +SW +
Sbjct: 232 LCSGVREARRLFDEMPERN---LVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTM 288
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I GY++ + ++ ML +G PN+ +++ A ++ G LHG ++K GF
Sbjct: 289 IDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGF 348
Query: 483 PYDVFLGT-------------------------------ALTDTYAKSGDIESSRRVFDR 511
F+ T ALT + K+G ++ + + FD+
Sbjct: 349 DCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDK 408
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
M ++ SW+ M+ G A+S + K ++ LF +M I PNE+T++SV A + G + +G
Sbjct: 409 MHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEG 468
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS-NAWASLLSGC 630
M +I N ++DM ++ G ++ A F N + E S + W +++ G
Sbjct: 469 KLAHEYMRS-ESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGL 527
Query: 631 KTYKNEQIAERAVKNLWKL 649
++ + + ++ +
Sbjct: 528 ASHGHASMCLEVFSDMQRF 546
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/731 (31%), Positives = 374/731 (51%), Gaps = 78/731 (10%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+++ G+ +H L + G+ + YL L+ Y A ++ + +
Sbjct: 61 CVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLR 120
Query: 86 DLVVHNCMINA----NIQWGNLEEAQRLFDGMPERNEVSW-------------------- 121
D+V + MI A N + +R+ D E N +++
Sbjct: 121 DVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH 180
Query: 122 ---------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
TALI+ + K G + + F + +NV+SWTA I Q+
Sbjct: 181 TIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLN 240
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA +L+ ++L++G+ PN VTF S+ +C G + I + G E + V N+LI
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
T+ K V EAR IFD M +R+ +SWS
Sbjct: 301 TMYCKCNSVQ-------------------------------EAREIFDRMSKRDVISWSA 329
Query: 287 MIARYNQSGYPE-----EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
MIA Y QSGY + E F+L +M R PN F +L A + AL G +HA
Sbjct: 330 MIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAE 389
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+ K+G E D + A+ ++Y+KCG + VF + K+V V+W S + Y G +
Sbjct: 390 LSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV---VAWTSFLSMYIKCGDL 446
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
A+++F MP RN VSW+ +I+GY ++ VF + + M G P++ T ++L A
Sbjct: 447 SSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEAC 506
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
++A LE+GK +H + +KLG D + T+L Y+K G + +R VFD+M +++ ++W
Sbjct: 507 GALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWN 566
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M+ G + G E+++LF+ M K ++PNE+T+ +V+ ACS +GLV +G + F M+
Sbjct: 567 AMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQED 626
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
+ + P +HY C+VD+L R+GRL EAE+FI SMP EPD + W +LL CK++ N Q+AER
Sbjct: 627 FKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAER 686
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A ++ +L + + Y+ LSNIYA AGRW D+ VR++M ++GL+K G S +E+ ++H
Sbjct: 687 AAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIH 746
Query: 702 FFFQKTDHNPK 712
F + +P+
Sbjct: 747 TFVAEDCAHPE 757
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 199/407 (48%), Gaps = 64/407 (15%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL + + +GR +H H+ + G+ + + L+ MY
Sbjct: 260 TFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMY---------------- 303
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
C N+ ++EA+ +FD M +R+ +SW+A+I+G+ + G Y +
Sbjct: 304 ---------CKCNS------VQEAREIFDRMSKRDVISWSAMIAGYAQSG-------YKD 341
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ E +L ++ GV PN+VTF SI +AC
Sbjct: 342 KESID-------------------EVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQ 382
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + K GFE S+ ++ + K G + A VF +M ++VV+WT L ++I+
Sbjct: 383 GRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIK 442
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GDL A ++F EMP RN VSW++MIA Y Q+G + F L M F+P+ +
Sbjct: 443 CGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITI 502
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A +L L G VHA +K+G+E D ++ +LI +YSKCG+ + R VFD + +D
Sbjct: 503 LEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRD- 561
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
V+WN+M+ GYG +G EA +LF M K N+++ +A+IS
Sbjct: 562 --TVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISA 606
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 218/467 (46%), Gaps = 72/467 (15%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA++L + + G+ N T+ + + CA+ F G V + + G E + + NSLI
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
K +V A VF RM RDVV+ WS
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVT-------------------------------WSS 127
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MIA Y + +P +AF F +MT + +PN F +L A + L G +H V +G
Sbjct: 128 MIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMG 187
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+E DV ++ ALI +YSKCGE VF + E++ VVSW ++I N Q
Sbjct: 188 METDVAVATALITMYSKCGEISVACEVFHKMTERN---VVSWTAIIQA---NAQ------ 235
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
H++ + F ++ +ML +G PN TF S+L + + +
Sbjct: 236 ----------------------HRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEA 273
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L +G+ +H I + G D+ + AL Y K ++ +R +FDRM ++ ISW+ M+ G
Sbjct: 274 LNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAG 333
Query: 527 LAESGYA-KESIN----LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
A+SGY KESI+ L E M + + PN++T +S+L AC+ G +++G + + +
Sbjct: 334 YAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKV 393
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ + T + +M ++ G + EAE + M + AW S LS
Sbjct: 394 -GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLS 438
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 189/449 (42%), Gaps = 55/449 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L+ T+ + QGR +H L K G +R L T + MY EA ++ +
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++V ++ I+ G+L A+++F MP RN VSW +I+
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIA---------------- 469
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
G+ QNG + +L + G +P+ VT +I +AC +
Sbjct: 470 ---------------GYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLER 514
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V K G E V SLI + K G+V AR+VFD+M RD V+W +L + +
Sbjct: 515 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQ 574
Query: 263 MGDLGEA----RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTS 317
GD EA +R+ E NE++ + +I+ +++G +E +FR M + P
Sbjct: 575 HGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQ 634
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ ++ L L+ + + E D+ + +AL+ + I
Sbjct: 635 HYGCMVDLLGRAGRLQEA---EEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHI 691
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEA---KELFDNMPKRNDVSWSAI-ISGYLE----- 428
+E + ++ + ++ Y G+ +++ + + D+ + D S+I I G +
Sbjct: 692 LELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAE 751
Query: 429 ---HKQFDLVFA----VFNEMLLSGEIPN 450
H + D + A + EM +G P+
Sbjct: 752 DCAHPEIDAIHAELETLTKEMKEAGYTPD 780
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + N +T+ V+ A E GK +H ++ +LG D++LG +L + Y+K D+ S+
Sbjct: 51 GLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASA 110
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+VF RM ++ ++W+ M+ A + + ++ + FE M +I PN +T LS+L AC++
Sbjct: 111 EQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNY 170
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
+++KG K +++ ++ + T ++ M S+ G +S A + + M E + +W +
Sbjct: 171 SILEKGRK-IHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMT-ERNVVSWTA 228
Query: 626 LLSG 629
++
Sbjct: 229 IIQA 232
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/701 (32%), Positives = 374/701 (53%), Gaps = 45/701 (6%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLI-MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
GR L + G+ + + +I Y+ + A + + D+ N M+
Sbjct: 110 GRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYC 169
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMK---HGRVEESMWYFERN---PFQ-NVIS 151
+ +A+ LF+ MPERN VSWT +ISG+ + HG+ + R P Q N S
Sbjct: 170 HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFAS 229
Query: 152 WTAAICGF-------------VQNGFSFEA----------------LKLFLKLLESGVKP 182
+A+ G ++ GF + L +K ES ++
Sbjct: 230 ALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER 289
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NE T+S++ A + ++V+ + K ++ +LIT + G +D AR +F
Sbjct: 290 NEYTWSTMIAALSHGGRIDAAIAVY----ERDPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+++ + VVSW ++ +++ G + EA+ +FD+MP RN +SW+ MIA Y Q+G EEA
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L +++ R P+ S + + A +++ AL +G VH+ +K+G + + F NALI +Y
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYG 465
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC + R VF +V KD+ VSWNS + N ++EA+ FDNM R+DVSW+ I
Sbjct: 466 KCRNMEYARQVFSRMVTKDI---VSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTI 522
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
IS Y +Q + F M E+PN + +L S+ + + G+ +H IKLG
Sbjct: 523 ISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGM 582
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
++ + AL Y K G SRR+FD M +++ +W ++ G A+ G +E+I +++
Sbjct: 583 DSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQH 641
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
ME + PNE+T + +L ACSH+GLVD+G K+F SM Y + P HY C+VD+L R+G
Sbjct: 642 MESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTG 701
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
+ AE FI MP EPD+ W++LL CK +KN +I +RA + L+++ + YV+LSN
Sbjct: 702 DVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSN 761
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
IY+S G W + VRK+M ++G+ K GCSW ++++++H F
Sbjct: 762 IYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSF 802
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 244/517 (47%), Gaps = 72/517 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+A I + GRV E+ F+ P +++I+W + I + NG A L+ + ++
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ S + + R +F E++ N++I+ ++ G++ +AR +
Sbjct: 98 TGAILLSGYGRLGRVLEARR--------VFDGMLERNTVAWNAMISCYVQNGDITMARRL 149
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M RDV SW +L + + +AR +F++MPERN VSW+VMI+ Y + +A+
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F +M R P+ S F+ LSA+ L L + LK G E+DV I A++++Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 362 SKCGETKDGRL-VFDSIVEKD----------------------------VAHVVSWNSMI 392
S+ D + F+S++E++ V + ++I
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 393 GGYGLNGQMEEAKELF-------------------------------DNMPKRNDVSWSA 421
G G++++A+ LF D MP RN +SW+
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY ++ + + + E+ SG +P+ S+ +S+ A +++ +LE G +H +K+G
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++ F AL Y K ++E +R+VF RM K+ +SW + L ++ E+ N F+
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFD 509
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
M ++ ++++ +++ A +H+ ++ + F +M
Sbjct: 510 NM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 205/396 (51%), Gaps = 30/396 (7%)
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+G +GEAR +FD MP R+ ++W+ MI+ Y +G P+ A L+ ++ N +I+
Sbjct: 47 LGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS----GGNMRTGAIL 102
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LS L + V +L E++ NA+I Y + G+ R +FD++ +DV
Sbjct: 103 LSGYGRLGRVLEARRVFDGML----ERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDV 158
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+ SWNSM+ GY + QM +A+ LF+ MP+RN VSW+ +ISGY + + +F +M
Sbjct: 159 S---SWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G +P++S F+S L A + +L+ + L +K GF DV +GTA+ + Y++ +
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 503 -ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+++ + F+ M ++NE +W+ M+ L+ G +I ++E SI I +
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGL--- 332
Query: 562 CSHSGLVDKGLKYFNSM-EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
+ G +D F + EPI + ++ ++G ++EA++ + MPF ++
Sbjct: 333 -AQCGRIDDARILFEQIPEPIV------VSWNALITGYMQNGMVNEAKELFDKMPFR-NT 384
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+WA +++G Y +E A L L E H +G
Sbjct: 385 ISWAGMIAG---YAQNGRSEEA---LGLLQELHRSG 414
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 176/387 (45%), Gaps = 25/387 (6%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F+ N +I + N+E A+++F M ++ VSW + ++ +++ ++E+ F+
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM 511
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
++ +SWT I + S EA+ F + PN + + C + ++G
Sbjct: 512 LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQ 571
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + K G + + V N+LI++ K G D +R +FD ME+RD+ +W I+ + + G
Sbjct: 572 QIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHG 630
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA +++ M NEV++ ++ + +G +E ++ F+ M++ Y P +
Sbjct: 631 LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY 690
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS--- 376
+ ++ L ++ + + IE D I +AL+ + G+ +
Sbjct: 691 ACMVDLLGRTGDVQGA---EQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFR 747
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF--DNMPKRNDVSWSAI-------ISGYL 427
I + + V +++ G+ G++ E +++ + K SW+ I ++G
Sbjct: 748 IEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDK 807
Query: 428 EHKQFDLVFAVFNEMLL----SGEIPN 450
+H+Q + + A E+ +G +P+
Sbjct: 808 QHEQIEEIVATLEELYTLLKATGYVPD 834
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/701 (32%), Positives = 374/701 (53%), Gaps = 45/701 (6%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLI-MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
GR L + G+ + + +I Y+ + A + + D+ N M+
Sbjct: 110 GRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYC 169
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMK---HGRVEESMWYFERN---PFQ-NVIS 151
+ +A+ LF+ MPERN VSWT +ISG+ + HG+ + R P Q N S
Sbjct: 170 HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFAS 229
Query: 152 WTAAICGF-------------VQNGFSFEA----------------LKLFLKLLESGVKP 182
+A+ G ++ GF + L +K ES ++
Sbjct: 230 ALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER 289
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NE T+S++ A + ++V+ + K ++ +LIT + G +D AR +F
Sbjct: 290 NEYTWSTMIAALSHGGRIDAAIAVY----ERDPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+++ + VVSW ++ +++ G + EA+ +FD+MP RN +SW+ MIA Y Q+G EEA
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L +++ R P+ S + + A +++ AL +G VH+ +K+G + + F NALI +Y
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYG 465
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC + R VF +V KD+ VSWNS + N ++EA+ FDNM R+DVSW+ I
Sbjct: 466 KCRNMEYARQVFSRMVTKDI---VSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTI 522
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
IS Y +Q + F M E+PN + +L S+ + + G+ +H IKLG
Sbjct: 523 ISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGM 582
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
++ + AL Y K G SRR+FD M +++ +W ++ G A+ G +E+I +++
Sbjct: 583 DSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQH 641
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
ME + PNE+T + +L ACSH+GLVD+G K+F SM Y + P HY C+VD+L R+G
Sbjct: 642 MESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTG 701
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
+ AE FI MP EPD+ W++LL CK +KN +I +RA + L+++ + YV+LSN
Sbjct: 702 DVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSN 761
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
IY+S G W + VRK+M ++G+ K GCSW ++++++H F
Sbjct: 762 IYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSF 802
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 244/517 (47%), Gaps = 72/517 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+A I + GRV E+ F+ P +++I+W + I + NG A L+ + ++
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ S + + R +F E++ N++I+ ++ G++ +AR +
Sbjct: 98 TGAILLSGYGRLGRVLEARR--------VFDGMLERNTVAWNAMISCYVQNGDITMARRL 149
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M RDV SW +L + + +AR +F++MPERN VSW+VMI+ Y + +A+
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F +M R P+ S F+ LSA+ L L + LK G E+DV I A++++Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 362 SKCGETKDGRL-VFDSIVEKD----------------------------VAHVVSWNSMI 392
S+ D + F+S++E++ V + ++I
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 393 GGYGLNGQMEEAKELF-------------------------------DNMPKRNDVSWSA 421
G G++++A+ LF D MP RN +SW+
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG 389
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY ++ + + + E+ SG +P+ S+ +S+ A +++ +LE G +H +K+G
Sbjct: 390 MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVG 449
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++ F AL Y K ++E +R+VF RM K+ +SW + L ++ E+ N F+
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFD 509
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
M ++ ++++ +++ A +H+ ++ + F +M
Sbjct: 510 NM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 205/396 (51%), Gaps = 30/396 (7%)
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+G +GEAR +FD MP R+ ++W+ MI+ Y +G P+ A L+ ++ N +I+
Sbjct: 47 LGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS----GGNMRTGAIL 102
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LS L + V +L E++ NA+I Y + G+ R +FD++ +DV
Sbjct: 103 LSGYGRLGRVLEARRVFDGML----ERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDV 158
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+ SWNSM+ GY + QM +A+ LF+ MP+RN VSW+ +ISGY + + +F +M
Sbjct: 159 S---SWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G +P++S F+S L A + +L+ + L +K GF DV +GTA+ + Y++ +
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 503 -ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+++ + F+ M ++NE +W+ M+ L+ G +I ++E SI I +
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGL--- 332
Query: 562 CSHSGLVDKGLKYFNSM-EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
+ G +D F + EPI + ++ ++G ++EA++ + MPF ++
Sbjct: 333 -AQCGRIDDARILFEQIPEPIV------VSWNALITGYMQNGMVNEAKELFDKMPFR-NT 384
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+WA +++G Y +E A L L E H +G
Sbjct: 385 ISWAGMIAG---YAQNGRSEEA---LGLLQELHRSG 414
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 176/387 (45%), Gaps = 25/387 (6%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F+ N +I + N+E A+++F M ++ VSW + ++ +++ ++E+ F+
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM 511
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
++ +SWT I + S EA+ F + PN + + C + ++G
Sbjct: 512 LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQ 571
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + K G + + V N+LI++ K G D +R +FD ME+RD+ +W I+ + + G
Sbjct: 572 QIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHG 630
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA +++ M NEV++ ++ + +G +E ++ F+ M++ Y P +
Sbjct: 631 LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHY 690
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS--- 376
+ ++ L ++ + + IE D I +AL+ + G+ +
Sbjct: 691 ACMVDLLGRTGDVQGA---EQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFR 747
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF--DNMPKRNDVSWSAI-------ISGYL 427
I + + V +++ G+ G++ E +++ + K SW+ I ++G
Sbjct: 748 IEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDK 807
Query: 428 EHKQFDLVFAVFNEMLL----SGEIPN 450
+H+Q + + A E+ +G +P+
Sbjct: 808 QHEQIEEIVATLEELYTLLKATGYVPD 834
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/623 (34%), Positives = 348/623 (55%), Gaps = 18/623 (2%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF--QNVISWTAAICGF 159
+L LF P V+ T+L+S + GR+ +S +F+ P ++ + A I F
Sbjct: 75 DLATPAVLFRADP--GPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAF 132
Query: 160 VQNGFSFEALKLFLKLLES--GVKPNEVTFSSICKACAEINDFRLG--LSVFGLIFKAGF 215
+ + A+ +F LL S ++P++ +F+S+ A +++D + + + K G
Sbjct: 133 ARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGA 192
Query: 216 EKHVSVCNSLITLSLKM---GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
+SV N+LI L +K G AR V D M ++D ++WT I+ + GD+ AR
Sbjct: 193 GAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSA 252
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
F+E+ +V W+ MI+ Y QSG EAF LFR+M P+ F+ +LSA A+
Sbjct: 253 FEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFF 312
Query: 333 RSGMHVHAHVLKIGI----EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
G VH +++ E + ++NAL+ LYSK G+ +FDS+ KDV VSW
Sbjct: 313 LHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDV---VSW 369
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+++ GY +G ++ A +F MP ++++SW ++SGY+ + +FN+M
Sbjct: 370 NTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVK 429
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P T++ + A + +L+ GK LH +++ GF G AL YA+ G ++ +R V
Sbjct: 430 PCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLV 489
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F MP+ + +SW M+ L + G+ +E++ LF++M I P+ ++ L++L AC+H+GLV
Sbjct: 490 FLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLV 549
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
D G +YF SME + I P HY ++D+L R+GR+ EA D I +MPFEP W ++LS
Sbjct: 550 DDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILS 609
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
GC+ + ++ A L+K+ EH Y+LLSN Y++AGRW+DA VRKLM ++G++K
Sbjct: 610 GCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKE 669
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
GCSW+EV N+VH F +P
Sbjct: 670 PGCSWIEVGNKVHVFLVGDTKHP 692
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 189/335 (56%), Gaps = 10/335 (2%)
Query: 84 GFDLVVHNCMINANIQW---GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
G L V N +I ++ G +A+++ D MPE++E++WT ++ G ++ G V +
Sbjct: 193 GAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSA 252
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE + + W A I G+VQ+G EA +LF +++ + P+E TF+S+ ACA F
Sbjct: 253 FEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFF 312
Query: 201 RLGLSVFG--LIFKAGF--EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
G SV G + + F E + V N+L+TL K G++ +A +FD M +DVVSW I
Sbjct: 313 LHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTI 372
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
L +IE G L A RIF EMP ++E+SW VM++ Y G E+A +LF QM KP
Sbjct: 373 LSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCD 432
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
++ ++A L AL+ G +HAH+++ G E NAL+ +Y++CG KD RLVF
Sbjct: 433 YTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLV 492
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ D VSWN+MI G +G EA ELFD M
Sbjct: 493 MPNVD---SVSWNAMISALGQHGHGREALELFDQM 524
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 156/340 (45%), Gaps = 50/340 (14%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V+N ++ + G + A ++FD M ++ VSW ++SG+++ G ++ + F+ P+
Sbjct: 335 LPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPY 394
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++ +SW + G+V G + +ALKLF ++ VKP + T++ AC E+ + G +
Sbjct: 395 KSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQL 454
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ + GFE S N+L+T+ + G V AR VF M D VSW ++ + G
Sbjct: 455 HAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHG 514
Query: 267 GEARRIFDEM------PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA +FD+M P+R +S+ ++ N +G ++ F+ F M R + P +
Sbjct: 515 REALELFDQMVAQGIYPDR--ISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHY 572
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ LIDL + G + R + ++
Sbjct: 573 A-----------------------------------RLIDLLGRAGRIGEARDLIKTMPF 597
Query: 380 KDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRN 415
+ + W +++ G +NG ME A +LF +P+ +
Sbjct: 598 EPTPAI--WEAILSGCRINGDMELGAYAADQLFKMVPEHD 635
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/643 (34%), Positives = 364/643 (56%), Gaps = 45/643 (6%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+K ++ + N +++A + G E+A+++FD MP+RN S+ A++S K G+++E+
Sbjct: 45 IIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEA 104
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F+ P + SW A + GF Q+ EAL+ F+ + NE +F S ACA +
Sbjct: 105 FNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGL 164
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
D +G+ + LI K+ + L + MG + ++
Sbjct: 165 TDLNMGIQIHALISKSRY-----------LLDVYMG--------------------SALV 193
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
D++ + G + A+R FD M RN VSW+ +I Y Q+G +A +F M +P+
Sbjct: 194 DMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEI 253
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ V+SA AS A+R G+ +HA V+K D+ + NAL+D+Y+KC + RLVFD
Sbjct: 254 TLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDR 313
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ + +VVS SM+ GY ++ A+ +F NM ++N VSW+A+I+GY ++ + +
Sbjct: 314 M---PLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAV 370
Query: 437 AVFNEMLLSGEI--PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY------DVFL 488
+F +LL E P TF ++L A A++A L+ G+ H +I+K GF + D+F+
Sbjct: 371 RLF--LLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFV 428
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G +L D Y K G +E VF+RM +++ +SW M+ G A++GY ++ +F +M +
Sbjct: 429 GNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQ 488
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+ +T++ VL ACSH+GLV++G +YF+SM + P H+TC+VD+L R+G L EA
Sbjct: 489 KPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEAN 548
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
D I +MP +PD+ W SLL+ CK + N ++ + + L ++ + YVLLSN+YA G
Sbjct: 549 DLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELG 608
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
RW D + VRK M ++G+ K GCSW+E++++VH F K +P
Sbjct: 609 RWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHP 651
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 189/410 (46%), Gaps = 66/410 (16%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F+ + +C + I K F + + N L+ K G + AR VFDRM
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+R+ S+ +L V + G L EA +F MPE ++ SW+ M++ + Q EEA R F
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M F N F LSA A L L G+ +HA + K DV++ +AL+D+YSKCG
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ FD + V ++VSWNS+I Y NG +A E
Sbjct: 202 VACAQRAFDGMA---VRNIVSWNSLITCYEQNGPAGKALE-------------------- 238
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYD 485
VF M+ +G P++ T +SV+ A AS +++ +G +H +++K + D
Sbjct: 239 -----------VFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRND 287
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMP-------------------------------D 514
+ LG AL D YAK + +R VFDRMP +
Sbjct: 288 LVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMME 347
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
KN +SW ++ G ++G +E++ LF +++ SI P T ++L AC++
Sbjct: 348 KNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACAN 397
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 163/302 (53%), Gaps = 3/302 (0%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
++S F+ +L + K+ +HA ++K ++FI N L+D Y KCG +D R VF
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D + +++ S+N+++ G+++EA +F +MP+ + SW+A++SG+ +H +F+
Sbjct: 78 DRMPQRN---TFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEE 134
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F +M + N+ +F S L A A + L G +H I K + DV++G+AL D
Sbjct: 135 ALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVD 194
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K G + ++R FD M +N +SW ++ ++G A +++ +F M + P+E+T
Sbjct: 195 MYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEIT 254
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ SV+ AC+ + +GL+ + + + +VDM ++ R++EA + M
Sbjct: 255 LASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 615 PF 616
P
Sbjct: 315 PL 316
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 170/431 (39%), Gaps = 114/431 (26%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHK-ERYLTTRLLIMYLGSRKS 72
E + S + C S + + +G +H ++K ++ + L L+ MY R+
Sbjct: 252 EITLASVVSAC-------ASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRV 304
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
EA + + ++V M+ + +++ A+ +F M E+N VSW ALI+G
Sbjct: 305 NEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAG----- 359
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
+ QNG + EA++LFL L + P TF ++
Sbjct: 360 --------------------------YTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLN 393
Query: 193 ACAEINDFRLGLSVFGLIFKAGF------EKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
ACA + D +LG I K GF E + V NSLI + +K G V+ VF+RM
Sbjct: 394 ACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMV 453
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+RDVVS W+ MI Y Q+GY A +FR+
Sbjct: 454 ERDVVS-------------------------------WNAMIVGYAQNGYGTNALEIFRK 482
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M KP+ HV IG+ + S G
Sbjct: 483 MLVSGQKPD-------------------------HVTMIGV----------LSACSHAGL 507
Query: 367 TKDGRLVFDSI-VEKDVAHVVS-WNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAII 423
++GR F S+ E +A + + M+ G G ++EA +L MP + D V W +++
Sbjct: 508 VEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLL 567
Query: 424 SGYLEHKQFDL 434
+ H +L
Sbjct: 568 AACKVHGNIEL 578
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/661 (35%), Positives = 358/661 (54%), Gaps = 50/661 (7%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR------VEESMWYFE 142
+HNC NL++ R+ M +S T S +K ++ S+ F+
Sbjct: 48 LHNCH--------NLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFD 99
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA-EINDFR 201
R N W + ++Q+ + +AL L+ ++++ V P+ T+ + +ACA + +F
Sbjct: 100 RIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG 159
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G + + K GF+ V V N+LI + G + AR +FD D VSW IL ++
Sbjct: 160 -GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYV 218
Query: 262 EMGDLGEARRIFDEMPERN-------------------------------EVSWSVMIAR 290
+ GD+ EA+ IFD+MP+RN VSWS +I+
Sbjct: 219 KKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISG 278
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y Q+G EEA +F +M + + VLSA A L +++G +H V+++GIE
Sbjct: 279 YEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESY 338
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
V + NALI +YS GE D + +F+ D +SWNSMI G G +E+A+ LFD
Sbjct: 339 VNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQ---ISWNSMISGCMKCGSVEKARALFDV 395
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
MP+++ VSWSA+ISGY +H F A+F+EM L P+++ SV+ A +A+L++G
Sbjct: 396 MPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG 455
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K +H I K G +V LGT L D Y K G +E++ VF+ M +K SW ++ GLA +
Sbjct: 456 KWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVN 515
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G + S+++F EM+ + PNE+T + VL AC H GLVD+G +F SM + I+PN +H
Sbjct: 516 GLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKH 575
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
Y C+VD+L R+G L+EAE I SMP PD W +LL CK + + ++ ER + L +L
Sbjct: 576 YGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQ 635
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+H +VLLSNI+AS G W D + VR +M ++G+ K+ GCS +E VH F +
Sbjct: 636 PDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTH 695
Query: 711 P 711
P
Sbjct: 696 P 696
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 256/494 (51%), Gaps = 36/494 (7%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H H++K G + Y+ L+ MY +A ++ + D V N ++ ++
Sbjct: 160 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVK 219
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G++EEA+ +FD MP+RN V+ ++I K G+V E+ F ++++SW+A I G+
Sbjct: 220 KGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGY 279
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QNG EAL +F+++ +G++ +EV S+ ACA ++ + G + GL+ + G E +V
Sbjct: 280 EQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYV 339
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
++ N+LI + GE+ A+ +F+ D +SW ++ ++ G + +AR +FD MPE+
Sbjct: 340 NLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEK 399
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+ VSWS +I+ Y Q E LF +M +P+ + V+SA L AL G VH
Sbjct: 400 DIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVH 459
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
A++ K G++ +V + L+D+Y KCG ++ VF+ + EK V+ SWN++I G +NG
Sbjct: 460 AYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVS---SWNALIIGLAVNG 516
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+E + ++ F+EM +G IPN+ TF VL
Sbjct: 517 LVERSLDM-------------------------------FSEMKNNGVIPNEITFMGVLG 545
Query: 460 ASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + +++G+ +I K G +V + D ++G + + ++ + MP ++
Sbjct: 546 ACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDV 605
Query: 519 -SWTVMVRGLAESG 531
+W ++ + G
Sbjct: 606 ATWGALLGACKKHG 619
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 165/370 (44%), Gaps = 67/370 (18%)
Query: 35 NLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMI 94
++V G+ +HG +I+ GI L L+ MY GS + ++A ++ + D + N MI
Sbjct: 318 SIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMI 377
Query: 95 NANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
+ ++ G++E+A+ LFD MPE++ VSW+A+ISG+ +H
Sbjct: 378 SGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQH----------------------- 414
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
+ FS E L LF ++ ++P+E S+ AC + G V I K G
Sbjct: 415 -------DCFS-ETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNG 466
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+ +V + +L+ + +K G V+ A VF+ ME++ V SW ++ +G A
Sbjct: 467 LKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALI--------IGLA----- 513
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+G E + +F +M PN F VL A + +
Sbjct: 514 ------------------VNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDE 555
Query: 335 G-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDVAHVVSWNSMI 392
G H + + K GIE +V ++DL + G + + +S+ + DVA +W +++
Sbjct: 556 GRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVA---TWGALL 612
Query: 393 GGYGLNGQME 402
G +G E
Sbjct: 613 GACKKHGDTE 622
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/636 (33%), Positives = 351/636 (55%), Gaps = 35/636 (5%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
I+K ++ + N +++A ++ + A+R+FD MP+RN SW L+S + K + E
Sbjct: 34 HIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPE 93
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACA 195
F P ++++SW + I + GF +++K + +L +G N + S++ +
Sbjct: 94 MERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILAS 153
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ LGL V G + K GF+ +V V + L+ + K G V AR FD M +++VV +
Sbjct: 154 KQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNT 213
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ + + ++R++F +M E++ +SW+ MIA + Q+G EA LFR+M + + +
Sbjct: 214 LIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMD 273
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
F VL+A + AL+ G VHA++++ + ++F+ +AL+D+Y KC K
Sbjct: 274 QYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIK------- 326
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
A+ +F M +N VSW+A++ GY ++ +
Sbjct: 327 ---------------------------SAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEA 359
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F +M +G P+ T SV+ + A++ASLE+G H + + G + + AL
Sbjct: 360 VKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTL 419
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G IE S R+F M +E+SWT +V G A+ G A E++ LFE M P+++T
Sbjct: 420 YGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTF 479
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+ VL ACS +GLV KG + F SM + I P HYTC++D+ SR+GRL EA FIN MP
Sbjct: 480 IGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMP 539
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
F PD+ WASLLS C+ ++N +I + A ++L KL + A Y+LLS+IYA+ G+W + N
Sbjct: 540 FSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVAN 599
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+RK M +KGLRK GCSW++ +NQVH F NP
Sbjct: 600 LRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNP 635
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 237/560 (42%), Gaps = 120/560 (21%)
Query: 32 TSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHN 91
+ Q V G +HGH++K G ++ + L+ MY + A + ++ ++V++N
Sbjct: 153 SKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYN 212
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
+I ++ +E++++LF M E++ +SWTA+I+G
Sbjct: 213 TLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAG------------------------ 248
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
F QNG EA+ LF ++ ++ ++ TF S+ AC + + G V I
Sbjct: 249 -------FTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYII 301
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ ++ ++ V ++L+ + K + A +VF +M ++VVSWT
Sbjct: 302 RTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWT----------------- 344
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
M+ Y Q+GY EEA ++F M +P+ V+S+ A+L +
Sbjct: 345 --------------AMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLAS 390
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G H L G+ + +SNAL+ LY KCG +D +F + D VSW ++
Sbjct: 391 LEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVD---EVSWTAL 447
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
+ GY G+ E LF++ ML G P+K
Sbjct: 448 VSGYAQFGKANETLRLFES-------------------------------MLAHGFKPDK 476
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLG--FPYDVFLGTALTDTYAKSGDIESSRRVF 509
TF VL A + ++KG + +IK P + T + D ++++G +E +R+
Sbjct: 477 VTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHY-TCMIDLFSRAGRLEEARKFI 535
Query: 510 DRMP-DKNEISWTVMV------RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
++MP + I W ++ R + +A ES+ E S +LS ++A
Sbjct: 536 NKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTAS-----YILLSSIYAA 590
Query: 563 S---------HSGLVDKGLK 573
G+ DKGL+
Sbjct: 591 KGKWEEVANLRKGMRDKGLR 610
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 40/348 (11%)
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
LK R +H H++K ++F+ N L+ Y+K R VFD + +++ + SW
Sbjct: 22 LKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRN---LYSW 78
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+++ Y + E + +F MP R+ VSW+++IS Y +N ML +G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 449 P-NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
N+ S++L ++ + G +HG ++K GF VF+G+ L D Y+K+G + +R+
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 508 VFDRMPDKN-------------------------------EISWTVMVRGLAESGYAKES 536
FD MP+KN ISWT M+ G ++G +E+
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
I+LF EM ++ ++ T SVL AC + +G K ++ + + N + +VD
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEG-KQVHAYIIRTDYQDNIFVGSALVD 317
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
M + + AE M + + +W ++L G Y +E AVK
Sbjct: 318 MYCKCKSIKSAETVFRKMNCK-NVVSWTAMLVG---YGQNGYSEEAVK 361
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/642 (32%), Positives = 363/642 (56%), Gaps = 41/642 (6%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+K + + N +I+ + G ++ A++LFD M ERN SW ++I F K G ++++
Sbjct: 45 IIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDA 104
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+ FE+ P + SW + I GF Q+G EAL F ++ G NE +F S ACA +
Sbjct: 105 VHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGL 164
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
D +LG + L++++ + V + ++L+ + K G V+ A+S
Sbjct: 165 QDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQS----------------- 207
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+FDEM R+ VSW+ +I Y Q+G +EA ++F +M + +P+
Sbjct: 208 --------------VFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEV 253
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ V+SA A++ A++ G +HA V+K D+ + NAL+D+Y+KC + R++FD
Sbjct: 254 TLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDM 313
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ + VVS SM+ GY +++ A+ +F NM ++ ++W+A+I+G ++ + +
Sbjct: 314 M---PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEAL 370
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY------DVFLGT 490
+F + P TF ++L A A++A L+ G+ H ++K GF + DVF+G
Sbjct: 371 ILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGN 430
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
+L D Y K G +E+ RVF M +K+ +SW M+ G A++G+ +++ +F +M ++ P
Sbjct: 431 SLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAP 490
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+ +T++ VL ACSH+GL+D+G YF SM + + P HYTC+VD+L R+G L EA++
Sbjct: 491 DHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNL 550
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
I M +PD+ W SLL+ CK ++N Q+ E VK L ++ E+ YVLLSN+YA W
Sbjct: 551 IEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDW 610
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ + VRKLM ++G+ K GCSW+E++ +++ F K + +
Sbjct: 611 KNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHAR 652
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 234/512 (45%), Gaps = 87/512 (16%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
FS + CA R V I K+ F + N LI + K G VD+AR +FDRM
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+R++ SW I+ F + G L +A IF++MP+ ++ SW+ MI+ + Q G +EA F Q
Sbjct: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M + F N F LSA A L+ L+ G +H+ V + DV++ +AL+D+YSKCG
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ + VFD E V VSWNS+I Y NG ++EA
Sbjct: 202 VEYAQSVFD---EMTVRSRVSWNSLITCYEQNGPVDEA---------------------- 236
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYD 485
+F EM+ G P++ T +SV+ A A+++++++G+ +H +++K F D
Sbjct: 237 ---------LKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRND 287
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMP-------------------------------D 514
+ LG AL D YAK I +R +FD MP
Sbjct: 288 LILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMV 347
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC-----------S 563
K+ I+W ++ G ++G +E++ LF +++ S+ P T ++L AC +
Sbjct: 348 KDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQA 407
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
HS ++ G ++ Y + ++DM + G + M E D +W
Sbjct: 408 HSHVLKHGFRF------QYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM-LEKDCVSW 460
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
+++ G Y +A++ K+ E A
Sbjct: 461 NAMIVG---YAQNGFGNKALEVFCKMLESGEA 489
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 180/332 (54%), Gaps = 4/332 (1%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
++S FS +L+ A ++ R VHA ++K + FI N LID+Y KCG R +F
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D ++E++ + SWNS+I + +G +++A +F+ MP+ + SW+++ISG+ +H +FD
Sbjct: 78 DRMLERN---IFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 134
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F +M G + N+ +F S L A A + L+ G +H + + + DV++G+AL D
Sbjct: 135 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 194
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K G +E ++ VFD M ++ +SW ++ ++G E++ +F EM K + P+E+T
Sbjct: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ SV+ AC+ + +G + + + + ++DM ++ R++EA + M
Sbjct: 255 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 314
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
P + S++SG ++A N+
Sbjct: 315 PIRSVVSE-TSMVSGYAKASKVKVARYMFSNM 345
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 146/367 (39%), Gaps = 84/367 (22%)
Query: 39 QGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+G+ +H ++K + L LL MY + EA I + +V M++
Sbjct: 270 EGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGY 329
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
+ ++ A+ +F M ++ ++W ALI+G
Sbjct: 330 AKASKVKVARYMFSNMMVKDVITWNALIAG------------------------------ 359
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-- 215
QNG + EAL LF L V P TF ++ ACA + D +LG + K GF
Sbjct: 360 -CTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRF 418
Query: 216 ----EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI-------------LD 258
+ V V NSLI + +K G V+ VF M ++D VSW + L+
Sbjct: 419 QYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALE 478
Query: 259 VFIEM----------------------GDLGEARRIFDEMPERNEV-----SWSVMIARY 291
VF +M G L E R F M ++ + ++ M+
Sbjct: 479 VFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLL 538
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD- 350
++GY EEA L +M S +P+ + +L+A + ++ G +V +L++ E
Sbjct: 539 GRAGYLEEAKNLIEEM---SMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSG 595
Query: 351 --VFISN 355
V +SN
Sbjct: 596 PYVLLSN 602
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 132/343 (38%), Gaps = 102/343 (29%)
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+G ++H + DL+F + S FS +L A S +H IIK F
Sbjct: 4 NGLVKHLKGDLLFL------------DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFA 51
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+ F+ L D Y K G ++ +R++FDRM ++N SW ++ +SG+ +++++FE+M
Sbjct: 52 SETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKM 111
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME-------------------PIYNI 584
+ ++ + S++ G D+ L YF M + ++
Sbjct: 112 PQV----DQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDL 167
Query: 585 KPNGRHYTCV---------------VDMLSRSGRLSEAEDFINSMP-------------- 615
K + ++ V VDM S+ GR+ A+ + M
Sbjct: 168 KLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCY 227
Query: 616 --------------------FEPDSNAWASLLSGCKTY----KNEQIAERAVKNLWKLAE 651
EPD AS++S C T + +QI R VK +
Sbjct: 228 EQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVK-----CD 282
Query: 652 EHPAGYVL---LSNIYASAGR------WIDAMNVRKLMTEKGL 685
E +L L ++YA R D M +R +++E +
Sbjct: 283 EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSM 325
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/628 (34%), Positives = 349/628 (55%), Gaps = 41/628 (6%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++A + G+L +A+R+FDGMP RN S+ AL+S + GR ++++ F P +
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
S+ A + Q+G +AL+ + N +F+S ACA R G V L+
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K+ H S DV T ++D++ + EA+
Sbjct: 174 TKS---SHGS----------------------------DVYIGTALVDMYAKCERPEEAQ 202
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
++FD MPERN VSW+ +I Y Q+G +EA LF +M + F P+ + V+SA A L
Sbjct: 203 KVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLA 262
Query: 331 ALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
A R G VH ++K +D+ ++NAL+D+Y+KCG T + + VFD + + VVS
Sbjct: 263 AGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMA---IRSVVSET 319
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SMI GY + + +A+ +F M ++N V+W+ +I+ Y + + + +F + P
Sbjct: 320 SMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWP 379
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD------VFLGTALTDTYAKSGDIE 503
T+ +VL A A++A+L+ G+ H ++K GF +D VF+G +L D Y K+G I
Sbjct: 380 THYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSIS 439
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+VF+RM ++ +SW M+ G A++G AK+++ LFE M ++ P+ +T++ VL AC
Sbjct: 440 DGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACG 499
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
HSGLV +G +YF SM + I P HYTC++D+L R+G L E E+ I +MP EPD+ W
Sbjct: 500 HSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLW 559
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
ASLL C+ +KN + E A L++L ++ YVLLSN+YA G+W D VR+ M +
Sbjct: 560 ASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHR 619
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
G+ K GCSW+E+ +V+ F + + +P
Sbjct: 620 GVSKQPGCSWIEIGRKVNVFLARDNIHP 647
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 159/568 (27%), Positives = 241/568 (42%), Gaps = 153/568 (26%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
SF S + C S+ G +H + K+ + Y+ T L+ MY +
Sbjct: 149 SFASALSAC-------ASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERP--- 198
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
EEAQ++FD MPERN VSW +LI+ + ++G V+
Sbjct: 199 ----------------------------EEAQKVFDAMPERNIVSWNSLITCYEQNGPVD 230
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
EAL LF+++++ G P+EVT +S+ ACA
Sbjct: 231 -------------------------------EALALFVRMMKDGFVPDEVTLASVMSACA 259
Query: 196 EINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ R G V + K+ F + + + N+L+ + K G A+ VFDRM R VVS T
Sbjct: 260 GLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSET 319
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++ + + ++G+A+ +F +M E+N V+W+V+IA Y + EEA RLF ++ R S P
Sbjct: 320 SMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWP 379
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGI------EKDVFISNALIDLYSKCGETK 368
+ VL+A A+L L+ G H HVLK G E DVF+ N+L+D+Y K G
Sbjct: 380 THYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSIS 439
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
DG VF+ + +D VSWN+MI GY NG+ ++A LF+
Sbjct: 440 DGAKVFERMAARD---NVSWNAMIVGYAQNGRAKDALLLFE------------------- 477
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
ML S E P+ T VL A
Sbjct: 478 ------------RMLCSNERPDSVTMIGVLSAC--------------------------- 498
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEI-----SWTVMVRGLAESGYAKESINLFEEM 543
SG ++ RR F M + + I +T M+ L +G+ KE L E M
Sbjct: 499 --------GHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENM 550
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKG 571
+ P+ + S+L AC +D G
Sbjct: 551 ---PMEPDAVLWASLLGACRLHKNIDMG 575
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 210/458 (45%), Gaps = 84/458 (18%)
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
F + N+L++ ++G + AR VFD M R+ S+ +L +G +A +F
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+P+ ++ S++ ++A Q G +A R M F N F+ LSA AS KA R+
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VHA V K DV+I AL+D+Y+KC ++ + VFD++ E++ +VSWNS+I
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERN---IVSWNSLITC 222
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y NG ++EA A+F M+ G +P++ T
Sbjct: 223 YEQNGPVDEA-------------------------------LALFVRMMKDGFVPDEVTL 251
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+SV+ A A +A+ +G+ +H +++K F D+ L AL D YAK G ++ VFDRM
Sbjct: 252 ASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMA 311
Query: 514 -------------------------------DKNEISWTVMVRGLAESGYAKESINLFEE 542
+KN ++W V++ A + +E++ LF
Sbjct: 312 IRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVR 371
Query: 543 MEKTSITPNELTILSVLFAC-----------SHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+++ S+ P T +VL AC +H ++ +G ++ + E +
Sbjct: 372 LKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVG------ 425
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+VDM ++G +S+ M D+ +W +++ G
Sbjct: 426 NSLVDMYLKTGSISDGAKVFERMAAR-DNVSWNAMIVG 462
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/623 (33%), Positives = 355/623 (56%), Gaps = 15/623 (2%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF--QNVISWTAAICGF 159
+L LF P+ V+ T+L++ GR+ ++ +F+ P ++ + A + F
Sbjct: 78 DLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAF 137
Query: 160 VQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLG--LSVFGLIFKAGFE 216
+ + A+ +F LL SG ++P++ +F+++ A ++++ + + K+G
Sbjct: 138 ARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAA 197
Query: 217 KHVSVCNSLITLSLKMGEVDL---ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF 273
+SV N+LI L +K + AR V D M +D ++WT ++ ++ GD+ AR +F
Sbjct: 198 AVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVF 257
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
+E+ + +V W+ MI+ Y QSG +AF LFR+M + F+ VLSA A+
Sbjct: 258 EEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFV 317
Query: 334 SGMHVHAHVLKIGI----EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
G VH ++++ E + ++NAL+ LYSK G+ + +FD++ KDV VSWN
Sbjct: 318 HGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDV---VSWN 374
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+++ GY +G +++A E+F MP +ND+SW ++SGY+ + +FN+M P
Sbjct: 375 TILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKP 434
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
T++ + A + +L+ G+ LH +++ GF G AL YAK G + +R VF
Sbjct: 435 CDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVF 494
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
MP+ + +SW M+ L + G+ +E++ LF++M I P+ ++ L++L AC+H+GLVD
Sbjct: 495 LVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVD 554
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+G YF SM+ + I P HY ++D+L RSGR+ EA D I +MPFEP + W ++LSG
Sbjct: 555 EGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG 614
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+T + + A L+++ +H Y+LLSN Y++AGRW+DA VRKLM ++G++K
Sbjct: 615 CRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP 674
Query: 690 GCSWVEVRNQVHFFFQKTDHNPK 712
GCSW+EV +++H F +P+
Sbjct: 675 GCSWIEVGSKIHVFLVGDTKHPE 697
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 232/503 (46%), Gaps = 84/503 (16%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYL---GSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
LH ++K+G ++ L+ +Y+ S +A +++ ++ D + M+ ++
Sbjct: 187 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 246
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G++ A+ +F+ + + +V W A+ISG +
Sbjct: 247 RGDVNAARSVFEEVDGKFDVVWNAMISG-------------------------------Y 275
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK--AGF-- 215
VQ+G +A +LF +++ V +E TF+S+ ACA F G SV G I + F
Sbjct: 276 VQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVP 335
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
E + V N+L+TL K G++ +A+ +FD M +DVVSW IL +I+ G L +A +F
Sbjct: 336 EAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKV 395
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MP +N++SW VM++ Y G E+A +LF QM KP ++ ++A L AL+ G
Sbjct: 396 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 455
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+HAH+++ G E NAL+ +Y+KCG D RLVF + D VSWN+MI
Sbjct: 456 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLD---SVSWNAMISAL 512
Query: 396 GLNGQMEEAKELFDNM------PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
G +G EA ELFD M P R +S+ I++ D F F M
Sbjct: 513 GQHGHGREALELFDQMVAEGIDPDR--ISFLTILTACNHAGLVDEGFHYFESM------- 563
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
K F + G+D + ++I D +SG I +R +
Sbjct: 564 -KRDF-----------GISPGEDHYARLI---------------DLLGRSGRIGEARDLI 596
Query: 510 DRMPDKNEIS-WTVMVRGLAESG 531
MP + S W ++ G +G
Sbjct: 597 KTMPFEPTPSIWEAILSGCRTNG 619
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 179/413 (43%), Gaps = 84/413 (20%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F S + C + + G+++HG +I+ L
Sbjct: 300 EFTFTSVLSAC-------ANAGFFVHGKSVHGQIIR-----------------------L 329
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ N + + L V+N ++ + G + A+R+FD M ++ VSW ++SG++ G
Sbjct: 330 QPNFVPEAA----LPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGC 385
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+++++ F+ P++N +SW + G+V G S +ALKLF ++ VKP + T++ A
Sbjct: 386 LDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAA 445
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C E+ + G + + + GFE S N+L+T+ K G V+ AR VF M D VSW
Sbjct: 446 CGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSW 505
Query: 254 TVILDVFIEMGDLGEARRIFDEM------PERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
++ + G EA +FD+M P+R +S+ ++ N +G +E F F M
Sbjct: 506 NAMISALGQHGHGREALELFDQMVAEGIDPDR--ISFLTILTACNHAGLVDEGFHYFESM 563
Query: 308 TR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
R + P ++ LIDL + G
Sbjct: 564 KRDFGISPGEDHYA-----------------------------------RLIDLLGRSGR 588
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRN 415
+ R + ++ + + W +++ G NG ME A +LF +P+ +
Sbjct: 589 IGEARDLIKTMPFEPTPSI--WEAILSGCRTNGDMEFGAYAADQLFRMIPQHD 639
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/628 (34%), Positives = 342/628 (54%), Gaps = 41/628 (6%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++A + G L +A+R+FD +P N S+ AL+S + GR ++ F P +
Sbjct: 799 NTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQC 858
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
S+ A I Q+ +AL + N +F+S ACA D R G+ V L+
Sbjct: 859 SYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALV 918
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K+ K DV + +LD++ + EAR
Sbjct: 919 SKSPHAK-------------------------------DVYIGSALLDMYAKCEWPEEAR 947
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
R+F+ MPERN VSW+ +I Y Q+G EA LF M + F P+ + V+SA A L
Sbjct: 948 RVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLA 1007
Query: 331 ALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
A R G VHA V+K +D+ +SNAL+D+Y+KCG T+ R VFD + + V VS
Sbjct: 1008 ADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSV---VSET 1064
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
S+I GY + +E+A+ +F M ++N ++W+ +I+ Y ++ + + +F + P
Sbjct: 1065 SLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWP 1124
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD------VFLGTALTDTYAKSGDIE 503
T+ +VL A +VA L+ G+ H ++K GF +D VF+G +L D Y K+G I+
Sbjct: 1125 THYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSID 1184
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+VF+RM ++ +SW M+ G A++G AK++++LFE M + +P+ +T++ VL AC
Sbjct: 1185 DGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACG 1244
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
HSGLV++G +YF SM + I P+ HYTC++D+L R+G L E E+ I M EPD+ W
Sbjct: 1245 HSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLW 1304
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
ASLL C+ +KN ++ E A L++L + YVLLSN+YA G+W D VR M +
Sbjct: 1305 ASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHR 1364
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
G+ K GCSW+E+ +V F + + +P
Sbjct: 1365 GVSKQPGCSWIEIGRKVSVFLARDNGHP 1392
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 179/644 (27%), Positives = 284/644 (44%), Gaps = 108/644 (16%)
Query: 7 SLFS------INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
SLFS I P+ + + + +C D+ R LHGH+ K L T
Sbjct: 137 SLFSNMNSLGIRPKDATMASVLSCCAECLDLCG------ARQLHGHIAKRDFQSNVILGT 190
Query: 61 RLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
L+ +Y NC + L +A+R FD + E N +S
Sbjct: 191 ALVDVY-----------------------GNCFL--------LADARRAFDDILEPNAIS 219
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W ++ + G A+ +F ++L +GV
Sbjct: 220 WNVIVRRYH-------------------------------LAGMGDMAVDMFFRMLSAGV 248
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P T S AC + N G + + + G+E HV V +S++ + K G +D A+S
Sbjct: 249 RPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQS 308
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+F+ +D+V T I+ G + +A+R+F+ M ERN VSW+ M+ Y +S A
Sbjct: 309 LFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGA 368
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF+QM + + + + VLSA + + G VHA +K G + NAL+ +
Sbjct: 369 LLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRM 428
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG + + LF+ +R+ SW+
Sbjct: 429 YSKCGCLRSAERLL--------------------------------LFEMGSERDSYSWN 456
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
++ISGY H + +M S PN+STFSS L A A++ L++G +H +I+
Sbjct: 457 SLISGYERHSMSEAALYALTKMQ-SEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRK 515
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G+ D L + L D Y K + S R+F+ P ++ I W M+ G A SG + ++LF
Sbjct: 516 GYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLF 575
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+EM+K I + +T L L +C G V G YF M +I P HY C++++L +
Sbjct: 576 DEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHYECMIELLGK 634
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
G + E EDF+ MPFEP + W + C+ Y N ++ ERA K
Sbjct: 635 HGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAK 678
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 234/502 (46%), Gaps = 41/502 (8%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G V ++ F+ P ++ SW A I + G EAL LF + G++P + T +S+
Sbjct: 99 GSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVL 158
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
CAE D + G I K F+ +V+
Sbjct: 159 SCCAECLDLCGARQLHGHIAKRDFQS-------------------------------NVI 187
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
T ++DV+ L +ARR FD++ E N +SW+V++ RY+ +G + A +F +M
Sbjct: 188 LGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAG 247
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+P S + A AL G +HA VL+ G E V + ++++D+Y+KCG +
Sbjct: 248 VRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQ 307
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+F+ KD +V S++ G G++ +AK +F+ M +RN VSW+A+++GY+
Sbjct: 308 SLFNLAPMKD---MVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMD 364
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+F +M + T SVL A + + KG+++H IK GF L A
Sbjct: 365 LTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNA 424
Query: 492 LTDTYAKSGDIESSRR--VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
L Y+K G + S+ R +F+ +++ SW ++ G ++ ++ +M+ + +T
Sbjct: 425 LVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ-SEVT 483
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSM-EPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
PN+ T S L AC++ L+ +G++ M Y I R + ++DM + + +
Sbjct: 484 PNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCKCRQFDYSI 541
Query: 609 DFINSMPFEPDSNAWASLLSGC 630
+ P D W S++ GC
Sbjct: 542 RIFEARP-SRDVILWNSMIFGC 562
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 201/467 (43%), Gaps = 95/467 (20%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G + +AR +FD MP R+ SW+ +I +++G+P EA LF M +P + + VL
Sbjct: 99 GSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVL 158
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
S A L +H H+ K + +V + AL+D+Y C D R FD I+E +
Sbjct: 159 SCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPN-- 216
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+SWN ++ Y L G D+ +F ML
Sbjct: 217 -AISWNVIVRRYHLAG-------------------------------MGDMAVDMFFRML 244
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+G P T S + A +LE+G+ +H +++ G+ + V + +++ D YAK G ++
Sbjct: 245 SAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMD 304
Query: 504 S-------------------------------SRRVFDRMPDKNEISWTVMVRGLAESGY 532
+ ++RVF+ M ++N +SW M+ G S
Sbjct: 305 AAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMD 364
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG-----------LKYFNSMEPI 581
++ LF++M + + + +T+ SVL AC +G++D G +F+S PI
Sbjct: 365 LTGALLLFQQMRQETREFDAITLGSVLSAC--TGILDIGKGEEVHAFAIKCGFFSS--PI 420
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAED-FINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+V M S+ G L AE + M E DS +W SL+SG Y+ ++E
Sbjct: 421 LK--------NALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISG---YERHSMSE 469
Query: 641 RAVKNLWKLAEE-HPAGYVLLSNIYASAGRWI--DAMNVRKLMTEKG 684
A+ L K+ E P S + A A ++ M + M KG
Sbjct: 470 AALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKG 516
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 152/603 (25%), Positives = 251/603 (41%), Gaps = 48/603 (7%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E +++ + LI + K + + S+ FE P ++VI W + I G +G L LF +
Sbjct: 518 EIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDE 577
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG- 233
+ + G+K + VTF +C RLG S F L+ + +I L K G
Sbjct: 578 MQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIELLGKHGC 637
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGD--LGE--ARRIFDEMP------------ 277
V+L V + W I D E G+ LGE A+ I D P
Sbjct: 638 MVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVDY 697
Query: 278 ERNEVSWSVMIARYNQSG--YPEEAFRLFRQMTRYSFKPNTS---------------CFS 320
E N+ ++ G E F L + + P T+ F
Sbjct: 698 ESNDGGREAESTSFSSEGEGCEELPFSLEGEASGSLPAPLTTRPLAIWYGMARHHHHHFV 757
Query: 321 IVLSALASLK-ALRSGMHV------HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
L A A L LRS ++ HA LK + F+ N L+ Y++ G D R V
Sbjct: 758 SHLRASAPLADLLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAYARLGRLPDARRV 817
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FD I + S+N+++ + G+ +A+ LF +P + S++A+I+ +H +
Sbjct: 818 FDEIPHPN---TFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGA 874
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
M + N +F+S L A A+ G +H + K DV++G+AL
Sbjct: 875 DALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALL 934
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK E +RRVF+ MP++N +SW ++ ++G E++ LF M K P+E+
Sbjct: 935 DMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEV 994
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T+ SV+ AC+ +G + + + + +VDM ++ GR A +
Sbjct: 995 TLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDR 1054
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
M S + S S Y E A ++ E++ + +L YA G +A
Sbjct: 1055 MA----SRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 1110
Query: 674 MNV 676
+ +
Sbjct: 1111 LRL 1113
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 168/373 (45%), Gaps = 55/373 (14%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V+ N +++ + G A+ +FD M R+ VS T+LI+G+ + VE++ F +
Sbjct: 1028 DMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMV 1087
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NVI+W I + QNG EAL+LF++L V P T+ ++ AC + D +LG
Sbjct: 1088 EKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQ 1147
Query: 206 VFGLIFKAGF------EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
+ K GF E V V NSL+ + LK G +D VF+RM RD VSW ++
Sbjct: 1148 AHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVG 1207
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSV----MIARYNQSGYPEEAFRLFRQMTR-YSFKP 314
+ G +A +F+ M E SV +++ SG EE R FR MT + P
Sbjct: 1208 HAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIP 1267
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD-GRLV 373
+ ++ +IDL + G K+ L+
Sbjct: 1268 SQDHYT-----------------------------------CMIDLLGRAGHLKEVEELI 1292
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRNDVSWSAIISGYLEH 429
+ +E D V W S++G L+ +E A +LF+ P RN + + + Y E
Sbjct: 1293 KEMSMEPD---AVLWASLLGSCRLHKNVEMGEWAAGKLFELDP-RNSGPYVLLSNMYAEL 1348
Query: 430 KQFDLVFAVFNEM 442
++ VF V + M
Sbjct: 1349 GKWADVFRVRSSM 1361
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 2/259 (0%)
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+N I G + +A+ELFD MP R+ SW+AII+ ++F+ M G
Sbjct: 88 FNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGI 147
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P +T +SVL A L + LHG I K F +V LGTAL D Y + +RR
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARR 207
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
FD + + N ISW V+VR +G ++++F M + P T+ + AC +
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNA 267
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+++G + ++ + + + + VVDM ++ G + A+ N P + D S++
Sbjct: 268 LEEG-RCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK-DMVMSTSIV 325
Query: 628 SGCKTYKNEQIAERAVKNL 646
SG + A+R + +
Sbjct: 326 SGLASCGRIADAKRVFEGM 344
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 239/725 (32%), Positives = 382/725 (52%), Gaps = 73/725 (10%)
Query: 47 LIKTGIHKERYLTTRLLIMYLGSRKSL-EANEIVKDLNGFDLVVHNCMINANIQWGNLEE 105
L G H L I LG + EA ++ + + + V HN MI+A + G + +
Sbjct: 5 LKSVGEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISD 64
Query: 106 AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
A++LFDGMP+RN VSW ++I+ ++ + RVEE+ F++ P +++ SWT I + +NG
Sbjct: 65 ARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGEL 124
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
+A LF L K N V +++ A+ F +F A K + NS+
Sbjct: 125 AKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARR----LFDAMPAKDLVSWNSM 177
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL------------------- 266
+T + GE+ L F+ M +RDVVSW +++D F+E+GDL
Sbjct: 178 LTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWV 237
Query: 267 ------------GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
EARR+FD+MP RN V+W+ MIA Y Q+ + +EA LF +M +
Sbjct: 238 TMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP----EK 293
Query: 315 NTSCFSIVLSA---------------------LASLKALRSG------MHVHAHVLKIGI 347
N+ ++ V++ +A+ A+ SG M +
Sbjct: 294 NSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQIS 353
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+DV N +I YS+CG + +F +V+KD+ VSWN+M+ Y GQM+ A ++
Sbjct: 354 IRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDI---VSWNTMVASYAQVGQMDAAIKI 410
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ M ++N VSW+++ISG ++ + F M G+ P++STF+ L + A +A+L
Sbjct: 411 FEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAAL 470
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+ GK LH ++K G+ D+F+ AL YAK G I S+ +F + + +SW ++
Sbjct: 471 QVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAY 530
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A +G +E++ LF +ME + P+E+T + +L ACSH GL+D+GLK F M YNI+P
Sbjct: 531 ALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPL 590
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C+VD+L R+GRL EA + M ++ W +LL C+ + N ++A+ A + L
Sbjct: 591 AEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLL 650
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+ + YVLLSN+ A AGRW + VR+LM EKG K G SW+E++N+VH F +
Sbjct: 651 EFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSED 710
Query: 708 DHNPK 712
+P+
Sbjct: 711 PAHPR 715
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 185/400 (46%), Gaps = 45/400 (11%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL-----------TTRLLIMY 66
N +++ + L ++ +N + ++G++ + + R L T ++ Y
Sbjct: 277 NCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGY 336
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
+ +++ +A +I ++ D+V N MI Q G ++EA LF M +++ VSW +++
Sbjct: 337 VQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVA 396
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
+ + G+++ ++ FE +N++SW + I G QNG +ALK F+ + G KP++ T
Sbjct: 397 SYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQST 456
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F+ +CA + ++G + L+ K+G+ + V N+LIT+ K G + A +F ++
Sbjct: 457 FACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDID 516
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
DVVSW + +IA Y +G EA +LF +
Sbjct: 517 HFDVVSW-------------------------------NSLIAAYALNGNGREALKLFHK 545
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHV-HAHVLKIGIEKDVFISNALIDLYSKCG 365
M P+ F +LSA + + + G+ + V IE ++DL + G
Sbjct: 546 MEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAG 605
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
++ + + K A+ W +++G ++G +E AK
Sbjct: 606 RLEEAFQLVRGM--KINANAGIWGALLGACRIHGNLELAK 643
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/616 (32%), Positives = 360/616 (58%), Gaps = 50/616 (8%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V +N MI+ ++ A+ LFD MPER+ SW +++G++++ R+ ++ F+ P +
Sbjct: 81 VSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK 140
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+V+SW + + G+ QNG+ EA ++F + E N ++++ + A +++ R+ +
Sbjct: 141 DVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLL--AAYVHNGRIEEAC- 193
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
L+F++ + + N L+ ++ ++ AR +FD+M RD +SW ++ + + G L
Sbjct: 194 -LLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLS 252
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+ARR+FDE P R+ +W+ M++ Y Q+G +EA F +M
Sbjct: 253 QARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP------------------- 293
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
EK+ NA+I Y + + R +F+S+ ++++ S
Sbjct: 294 --------------------EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS---S 330
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN+MI GYG G + +A++ FD MP+R+ VSW+AII+GY + ++ +F E+ GE
Sbjct: 331 WNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
N++TF L A +A+LE GK +HG+ +K+G+ F+G AL Y K G I+ +
Sbjct: 391 SLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAND 450
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
F+ + +K+ +SW M+ G A G+ ++++ +FE M+ + P+E+T++ VL ACSH+GL
Sbjct: 451 TFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL 510
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+D+G +YF SM Y + P +HYTC++D+L R+GRL EA+D I +MPF+P + +W +LL
Sbjct: 511 LDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
+ + N ++ E+A + ++K+ ++ YVLLSN+YA++GRW+DA +R M + G++K
Sbjct: 571 GASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQK 630
Query: 688 SGGCSWVEVRNQVHFF 703
G SWVEV+N++H F
Sbjct: 631 VPGYSWVEVQNKIHTF 646
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 6 RSLFSINPETSFNSYIETC----------LCLLKDITSQNLVIQGRALHGHL------IK 49
R LFS N Y+ C L KD+ S N ++ G A +G++
Sbjct: 109 RDLFSWN--VMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFD 166
Query: 50 TGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRL 109
K LL Y+ + + EA + + + +DL+ NC++ ++ L +A+ L
Sbjct: 167 NMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWL 226
Query: 110 FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
FD MP R+ +SW +ISG+ + G + ++ F+ +P ++V +WTA + G+VQNG EA
Sbjct: 227 FDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
F ++ E NEV++ N++I
Sbjct: 287 TFFDEMPEK----NEVSY-----------------------------------NAMIAGY 307
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
++ ++D+AR +F+ M R++ SW ++ + ++GD+ +AR+ FD MP+R+ VSW+ +IA
Sbjct: 308 VQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y QSG+ EEA +F ++ + N + F LS A + AL G +H +K+G
Sbjct: 368 GYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT 427
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
F+ NAL+ +Y KCG + F+ I EKD VVSWN+M+ GY +G +A +F+
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEEKD---VVSWNTMLAGYARHGFGRQALTVFE 484
Query: 410 NMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASV 464
+M K ++++ ++S D F M G IP ++ ++
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 465 ASLEKGKDL 473
LE+ +DL
Sbjct: 545 GRLEEAQDL 553
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 174/386 (45%), Gaps = 60/386 (15%)
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
R++ D++ W + + G A +F+ MP R+ VS++ MI+ Y ++ A L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F QM E+D+F N ++ Y +
Sbjct: 103 FDQMP---------------------------------------ERDLFSWNVMLTGYVR 123
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
D R +FD + EKD VVSWNS++ GY NG ++EA+E+FDNMP++N +SW+ ++
Sbjct: 124 NCRLGDARRLFDLMPEKD---VVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLL 180
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+ Y+ + + + +F E + S C +K D K+
Sbjct: 181 AAYVHNGRIEEACLLF-------ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR 233
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D + YA+ G + +RR+FD P ++ +WT MV G ++G E+ F+EM
Sbjct: 234 -DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM 292
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ NE++ +++ + +D + F SM P NI + ++ + G
Sbjct: 293 PEK----NEVSYNAMIAGYVQTKKMDIARELFESM-PCRNISS----WNTMITGYGQIGD 343
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSG 629
+++A F + MP + D +WA++++G
Sbjct: 344 IAQARKFFDMMP-QRDCVSWAAIIAG 368
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 176/414 (42%), Gaps = 71/414 (17%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D S N +I G A G L ++ + T ++ Y+ + EA +
Sbjct: 232 VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDE 291
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+ + V +N MI +Q ++ A+ LF+ MP RN SW +I+G+ + G + ++ +F
Sbjct: 292 MPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++ +SW A I G+ Q+G EAL +F+++ + G N TF CA+I
Sbjct: 352 DMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALE 411
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
LG + G K G+ V N+L+ + K G +D A F+ +E++DVVSW
Sbjct: 412 LGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW-------- 463
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ M+A Y + G+ +A +F M KP+
Sbjct: 464 -----------------------NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVG 500
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLSA + H +L G E YS TKD ++ S
Sbjct: 501 VLSACS-----------HTGLLDRGTEY----------FYSM---TKDYGVIPTS----- 531
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
+ MI G G++EEA++L NMP + SW A++ H +L
Sbjct: 532 ----KHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTEL 581
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 38/145 (26%)
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ++GL+D G +YF M Y++ P +HYTC++D+L R RL E
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE------------ 818
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
+LL + + N ++ E+A + +K+ ++ + K
Sbjct: 819 -----GALLGASRIHGNTELGEKAAQMFFKMGPQNSG--------------------ISK 853
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFF 703
M + G++K G SW EV+N++H F
Sbjct: 854 -MRDVGVQKVPGYSWFEVQNKIHTF 877
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/616 (32%), Positives = 360/616 (58%), Gaps = 50/616 (8%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V +N MI+ ++ A+ LFD MPER+ SW +++G++++ R+ ++ F+ P +
Sbjct: 81 VSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK 140
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+V+SW + + G+ QNG+ EA ++F + E N ++++ + A +++ R+ +
Sbjct: 141 DVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLL--AAYVHNGRIEEAC- 193
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
L+F++ + + N L+ ++ ++ AR +FD+M RD +SW ++ + + G L
Sbjct: 194 -LLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLS 252
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+ARR+FDE P R+ +W+ M++ Y Q+G +EA F +M
Sbjct: 253 QARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP------------------- 293
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
EK+ NA+I Y + + R +F+S+ ++++ S
Sbjct: 294 --------------------EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS---S 330
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN+MI GYG G + +A++ FD MP+R+ VSW+AII+GY + ++ +F E+ GE
Sbjct: 331 WNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
N++TF L A +A+LE GK +HG+ +K+G+ F+G AL Y K G I+ +
Sbjct: 391 SLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAND 450
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
F+ + +K+ +SW M+ G A G+ ++++ +FE M+ + P+E+T++ VL ACSH+GL
Sbjct: 451 TFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGL 510
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+D+G +YF SM Y + P +HYTC++D+L R+GRL EA+D I +MPF+P + +W +LL
Sbjct: 511 LDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
+ + N ++ E+A + ++K+ ++ YVLLSN+YA++GRW+DA +R M + G++K
Sbjct: 571 GASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQK 630
Query: 688 SGGCSWVEVRNQVHFF 703
G SWVEV+N++H F
Sbjct: 631 VPGYSWVEVQNKIHTF 646
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 234/489 (47%), Gaps = 65/489 (13%)
Query: 6 RSLFSINPETSFNSYIETC----------LCLLKDITSQNLVIQGRALHGHL------IK 49
R LFS N Y+ C L KD+ S N ++ G A +G++
Sbjct: 109 RDLFSWN--VMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFD 166
Query: 50 TGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRL 109
K LL Y+ + + EA + + + +DL+ NC++ ++ L +A+ L
Sbjct: 167 NMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWL 226
Query: 110 FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
FD MP R+ +SW +ISG+ + G + ++ F+ +P ++V +WTA + G+VQNG EA
Sbjct: 227 FDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
F ++ E NEV++ N++I
Sbjct: 287 TFFDEMPEK----NEVSY-----------------------------------NAMIAGY 307
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
++ ++D+AR +F+ M R++ SW ++ + ++GD+ +AR+ FD MP+R+ VSW+ +IA
Sbjct: 308 VQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y QSG+ EEA +F ++ + N + F LS A + AL G +H +K+G
Sbjct: 368 GYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT 427
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
F+ NAL+ +Y KCG + F+ I EKD VVSWN+M+ GY +G +A +F+
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEEKD---VVSWNTMLAGYARHGFGRQALTVFE 484
Query: 410 NMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASV 464
+M K ++++ ++S D F M G IP ++ ++
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 465 ASLEKGKDL 473
LE+ +DL
Sbjct: 545 GRLEEAQDL 553
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 174/386 (45%), Gaps = 60/386 (15%)
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
R++ D++ W + + G A +F+ MP R+ VS++ MI+ Y ++ A L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F QM E+D+F N ++ Y +
Sbjct: 103 FDQMP---------------------------------------ERDLFSWNVMLTGYVR 123
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
D R +FD + EKD VVSWNS++ GY NG ++EA+E+FDNMP++N +SW+ ++
Sbjct: 124 NCRLGDARRLFDLMPEKD---VVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLL 180
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+ Y+ + + + +F E + S C +K D K+
Sbjct: 181 AAYVHNGRIEEACLLF-------ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR 233
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D + YA+ G + +RR+FD P ++ +WT MV G ++G E+ F+EM
Sbjct: 234 -DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM 292
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ NE++ +++ + +D + F SM P NI + ++ + G
Sbjct: 293 PEK----NEVSYNAMIAGYVQTKKMDIARELFESM-PCRNISS----WNTMITGYGQIGD 343
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSG 629
+++A F + MP + D +WA++++G
Sbjct: 344 IAQARKFFDMMP-QRDCVSWAAIIAG 368
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 176/414 (42%), Gaps = 71/414 (17%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D S N +I G A G L ++ + T ++ Y+ + EA +
Sbjct: 232 VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDE 291
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+ + V +N MI +Q ++ A+ LF+ MP RN SW +I+G+ + G + ++ +F
Sbjct: 292 MPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++ +SW A I G+ Q+G EAL +F+++ + G N TF CA+I
Sbjct: 352 DMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALE 411
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
LG + G K G+ V N+L+ + K G +D A F+ +E++DVVSW
Sbjct: 412 LGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW-------- 463
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ M+A Y + G+ +A +F M KP+
Sbjct: 464 -----------------------NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVG 500
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLSA + H +L G E YS TKD ++ S
Sbjct: 501 VLSACS-----------HTGLLDRGTEY----------FYSM---TKDYGVIPTS----- 531
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
+ MI G G++EEA++L NMP + SW A++ H +L
Sbjct: 532 ----KHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTEL 581
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/648 (33%), Positives = 361/648 (55%), Gaps = 52/648 (8%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y+ + + EA + K + + V +N MI+ ++ G E A+ LFD MPER+ VSW +I
Sbjct: 69 YMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMI 128
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G++++ + ++ FER P ++V SW + G+ QNG +A ++F ++ E N+V
Sbjct: 129 KGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEK----NDV 184
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDR 244
+++++ A + + +FG E V N L+ +K ++ AR FD
Sbjct: 185 SWNALLSAYVQNSKLEEACVLFG-----SRENWALVSWNCLLGGFVKKKKIVEARQFFDS 239
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M+ RDVVSW I+ + + G++ EAR++FDE P + +W+ M++ Y Q+ EEA LF
Sbjct: 240 MKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELF 299
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
+M E++ NA++ Y +
Sbjct: 300 DRMP---------------------------------------ERNEVSWNAMLAGYVQG 320
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
+ + +FD + ++V+ +WN+MI GY G++ EAK LFD MPKR+ VSW+A+I+
Sbjct: 321 ERVEMAKELFDVMPCRNVS---TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 377
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
GY + +F M G N+S+FSS L A V +LE GK LHG+++K G+
Sbjct: 378 GYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 437
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
F+G AL Y K G IE + +F M K+ +SW M+ G + G+ +E++ FE M+
Sbjct: 438 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMK 497
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + P++ T+++VL ACSH+GLVDKG +YF++M Y ++PN +HY C+VD+L R+G L
Sbjct: 498 REGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLL 557
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
EA + + +MPFEPD+ W +LL + + N ++AE A ++ + E+ YVLLSN+Y
Sbjct: 558 EEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 617
Query: 665 ASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
AS+GRW D +R M +KG++K G SW+E++N+ H F + +P+
Sbjct: 618 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 665
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 224/492 (45%), Gaps = 80/492 (16%)
Query: 29 KDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
+D+ S N ++ G A +G + K LL Y+ + K EA +
Sbjct: 150 RDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSR 209
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ LV NC++ ++ + EA++ FD M R+ VSW +I+G+ ++G ++E+ F+
Sbjct: 210 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFD 269
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+P +V +WTA + G++QN EA +LF ++ E NEV+++++ + +
Sbjct: 270 ESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEM 325
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
+F ++ ++VS N++IT + G++ A+++FD+M KRD VSW
Sbjct: 326 AKELFDVMPC----RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW--------- 372
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+ MIA Y+QSG+ EA RLF M R + N S FS
Sbjct: 373 ----------------------AAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSA 410
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LS A + AL G +H ++K G E F+ NAL+ +Y KCG ++ +F + KD
Sbjct: 411 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD- 469
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+VSWN+MI GY +G EEA F++M +
Sbjct: 470 --IVSWNTMIAGYSRHGFGEEALRFFESMKR----------------------------- 498
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
G P+ +T +VL A + ++KG+ H G + + D ++G
Sbjct: 499 --EGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGL 556
Query: 502 IESSRRVFDRMP 513
+E + + MP
Sbjct: 557 LEEAHNLMKNMP 568
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 187/393 (47%), Gaps = 44/393 (11%)
Query: 28 LKDITSQNLVIQGRALHGHLIK-------TGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
++D+ S N +I G A +G + + + +H + + T ++ Y+ +R EA E+
Sbjct: 242 VRDVVSWNTIITGYAQNGEIDEARQLFDESPVH-DVFTWTAMVSGYIQNRMVEEARELFD 300
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
+ + V N M+ +Q +E A+ LFD MP RN +W +I+G+ + G++ E+
Sbjct: 301 RMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 360
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F++ P ++ +SW A I G+ Q+G S+EAL+LF+ + G + N +FSS CA++
Sbjct: 361 FDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVAL 420
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG + G + K G+E V N+L+ + K G ++ A +F M +D+VSW
Sbjct: 421 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW------- 473
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+ MIA Y++ G+ EEA R F M R KP+ +
Sbjct: 474 ------------------------NTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMV 509
Query: 321 IVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR-LVFDSIV 378
VLSA + + G + H G+ + ++DL + G ++ L+ +
Sbjct: 510 AVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPF 569
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
E D A W +++G ++G E A+ D +
Sbjct: 570 EPDAA---IWGTLLGASRVHGNTELAETAADKI 599
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 340/598 (56%), Gaps = 36/598 (6%)
Query: 117 NEVSWTALISGFMKH--GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
N + +I+ KH G +E + F+ P N W I G+ + G A+ ++ +
Sbjct: 50 NPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCE 109
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+LE GV P+E T+ + K + G + I K GF +V V N+LI L GE
Sbjct: 110 MLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGE 169
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
V +AR VFDR K GD+ V+W+VMI+ YN+S
Sbjct: 170 VSVARGVFDRSSK----------------GDV---------------VTWNVMISGYNRS 198
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
+E+ +LF +M R P++ VLSA + LK L G VH +V + IE +
Sbjct: 199 KQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLE 258
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NALID+Y+ CG+ +FD++ +DV +SW +++ G+ GQ+ A+ FD MP+R
Sbjct: 259 NALIDMYAACGDMDTALGIFDNMKSRDV---ISWTAIVTGFTNLGQVGLARNYFDKMPER 315
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ VSW+A+I GYL+ +F V ++F EM + P++ T S+L A A + +LE G+ +
Sbjct: 316 DFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIK 375
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
I K D F+G AL D Y G++E + R+F+ MP +++ISWT ++ GLA +GY +
Sbjct: 376 AYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGE 435
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++++F +M K SITP+E+T + VL AC+HSG+VDKG K+F M + I+PN HY C+
Sbjct: 436 EALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCM 495
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L R+G L EA + I +MP +P+S W SLL C+ +++E++AE A + + +L E+
Sbjct: 496 VDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENG 555
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A YVLL NIYA+ RW VRKLM ++G++K+ GCS +E+ VH F +P+
Sbjct: 556 AVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQ 613
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 165/368 (44%), Gaps = 68/368 (18%)
Query: 79 VKDLNGFDL-VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
VKDL + V+ N +I+ G+++ A +FD M R+ +SWTA+++GF G+V +
Sbjct: 246 VKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLA 305
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
YF++ P ++ +SWTA I G++Q E L LF ++ + +KP+E T SI ACA +
Sbjct: 306 RNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHL 365
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
LG + I K + V N+LI + G V+ A +F+ M RD +SWT ++
Sbjct: 366 GALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVI 425
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN-T 316
G A +GY EEA +F QM + S P+
Sbjct: 426 --------FGLA-----------------------INGYGEEALDMFSQMLKASITPDEV 454
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+C ++ + SGM ++K G+ R+
Sbjct: 455 TCIGVLCA------CTHSGM----------VDK---------------GKKFFARMTTQH 483
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLV 435
+E +VAH + M+ G G ++EA E+ NMP K N + W +++ H+ ++
Sbjct: 484 GIEPNVAH---YGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMA 540
Query: 436 FAVFNEML 443
++L
Sbjct: 541 EMAAQQIL 548
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS--GDIESSRRVFDRMPDKNEISW 520
+ S+ + K +H + I G + + + K GD+E +R VFD MP N W
Sbjct: 28 TCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVW 87
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
M++G + G +++++ EM + + P+E T
Sbjct: 88 NNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYT 121
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/682 (34%), Positives = 356/682 (52%), Gaps = 73/682 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
Q R H H++KTG+ + +L T+LL Y AN + C +A +
Sbjct: 31 QTRQAHAHILKTGLFNDTHLATKLLSHY--------ANNM-------------CFADATL 69
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ D +PE N S++ LI F K +
Sbjct: 70 ----------VLDLVPEPNVFSFSTLIYAFSKFHQFHH---------------------- 97
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
AL F ++L G+ P+ S KACA ++ + V G+ +GF+
Sbjct: 98 ---------ALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSD 148
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V +SL+ + +K ++ A VFDRM + DVVSW+ ++ + G + EA+R+F EM +
Sbjct: 149 SFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD 208
Query: 279 R----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
N +SW+ MIA +N SG EA +F M F+P+ + S VL A+ L+ L
Sbjct: 209 SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVM 268
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G+ +H +V+K G+ D +S+ALID+Y KC T + VFD + DV S N+ I G
Sbjct: 269 GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVG---SCNAFIFG 325
Query: 395 YGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
NGQ+E + LF + + N VSW+++I+ ++ + +F EM ++G PN
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPN 385
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
T +L A ++A+L GK H ++ G DV++G+AL D YAK G I++SR FD
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+P KN + W ++ G A G AKE++ +F+ M+++ P+ ++ VL ACS SGL ++
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G YFNSM Y I+ HY C+V +LSR+G+L +A I MP PD+ W +LLS C
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
+ + N + E A + L++L +P Y+LLSNIYAS G W + VR +M KGLRK+ G
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625
Query: 691 CSWVEVRNQVHFFFQKTDHNPK 712
CSW+EV+N+VH +P+
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQ 647
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 41/283 (14%)
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
S ASL R HAH+LK G+ D ++ L+ Y+ D LV D +
Sbjct: 24 STTASLSQTR---QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLV------ 74
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
P+ N S+S +I + + QF + F++ML
Sbjct: 75 ----------------------------PEPNVFSFSTLIYAFSKFHQFHHALSTFSQML 106
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G +P+ S + A A +++L+ + +HG GF D F+ ++L Y K I
Sbjct: 107 TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIR 166
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ RVFDRM + + +SW+ +V A G E+ LF EM + + PN ++ ++ +
Sbjct: 167 DAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
HSGL + + F M + +P+G T + +L G L +
Sbjct: 227 HSGLYSEAVLMFLDMH-LRGFEPDG---TTISSVLPAVGDLED 265
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 119/303 (39%), Gaps = 71/303 (23%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T CLL + ++ G+A H ++ GI + Y+ + L+ MY
Sbjct: 388 TIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY---------------- 431
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G ++ ++ FDG+P +N V W A+I+G+ HG+ +E+M
Sbjct: 432 ---------------AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAM---- 472
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
++F + SG KP+ ++F+ + AC++
Sbjct: 473 ---------------------------EIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505
Query: 203 GLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF 260
G F + K G E V ++TL + G+++ A ++ RM D W +L
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
Query: 261 -----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+ +G++ A ++F E+ N ++ ++ Y G E R+ M + N
Sbjct: 566 RVHNNVSLGEVA-AEKLF-ELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 316 TSC 318
C
Sbjct: 624 PGC 626
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
C +++ ASL + + H I+K G D L T L YA + + V D +P+ N
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
S++ ++ ++ +++ F +M + P+ + S + AC+ + K + + +
Sbjct: 81 SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSAL-KPARQVHGI 139
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + + +V M + ++ +A + M FEPD +W++L++
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/682 (34%), Positives = 356/682 (52%), Gaps = 73/682 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
Q R H H++KTG+ + +L T+LL Y AN + C +A +
Sbjct: 31 QTRQAHAHILKTGLFNDTHLATKLLSHY--------ANNM-------------CFADATL 69
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ D +PE N S++ LI F K +
Sbjct: 70 ----------VLDLVPEPNVFSFSTLIYAFSKFHQFHH---------------------- 97
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
AL F ++L G+ P+ S KACA ++ + V G+ +GF+
Sbjct: 98 ---------ALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSD 148
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V +SL+ + +K ++ A VFDRM + DVVSW+ ++ + G + EA+R+F EM +
Sbjct: 149 SFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD 208
Query: 279 R----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
N +SW+ MIA +N SG EA +F M F+P+ + S VL A+ L+ L
Sbjct: 209 SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVM 268
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G+ +H +V+K G+ D +S+ALID+Y KC T + VFD + DV S N+ I G
Sbjct: 269 GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVG---SCNAFIFG 325
Query: 395 YGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
NGQ+E + LF + + N VSW+++I+ ++ + +F EM ++G PN
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPN 385
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
T +L A ++A+L GK H ++ G DV++G+AL D YAK G I++SR FD
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+P KN + W ++ G A G AKE++ +F+ M+++ P+ ++ VL ACS SGL ++
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G YFNSM Y I+ HY C+V +LSR+G+L +A I MP PD+ W +LLS C
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
+ + N + E A + L++L +P Y+LLSNIYAS G W + VR +M KGLRK+ G
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625
Query: 691 CSWVEVRNQVHFFFQKTDHNPK 712
CSW+EV+N+VH +P+
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQ 647
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 41/288 (14%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
F+ + S ASL R HAH+LK G+ D ++ L+ Y+ D LV D +
Sbjct: 19 FNCLNSTTASLSQTR---QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLV- 74
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
P+ N S+S +I + + QF +
Sbjct: 75 ---------------------------------PEPNVFSFSTLIYAFSKFHQFHHALST 101
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F++ML G +P+ S + A A +++L+ + +HG GF D F+ ++L Y K
Sbjct: 102 FSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIK 161
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
I + RVFDRM + + +SW+ +V A G E+ LF EM + + PN ++ +
Sbjct: 162 CNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGM 221
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ +HSGL + + F M + +P+G T + +L G L +
Sbjct: 222 IAGFNHSGLYSEAVLMFLDMH-LRGFEPDG---TTISSVLPAVGDLED 265
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 119/303 (39%), Gaps = 71/303 (23%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T CLL + ++ G+A H ++ GI + Y+ + L+ MY
Sbjct: 388 TIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY---------------- 431
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G ++ ++ FDG+P +N V W A+I+G+ HG+ +E+M
Sbjct: 432 ---------------AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAM---- 472
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
++F + SG KP+ ++F+ + AC++
Sbjct: 473 ---------------------------EIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505
Query: 203 GLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF 260
G F + K G E V ++TL + G+++ A ++ RM D W +L
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565
Query: 261 -----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+ +G++ A ++F E+ N ++ ++ Y G E R+ M + N
Sbjct: 566 RVHNNVSLGEVA-AEKLF-ELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 316 TSC 318
C
Sbjct: 624 PGC 626
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 79/171 (46%), Gaps = 2/171 (1%)
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
C +++ ASL + + H I+K G D L T L YA + + V D +P+ N
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
S++ ++ ++ +++ F +M + P+ + S + AC+ + K + + +
Sbjct: 81 SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSAL-KPARQVHGI 139
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + + +V M + ++ +A + M FEPD +W++L++
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/611 (33%), Positives = 349/611 (57%), Gaps = 15/611 (2%)
Query: 114 PERNEVSWTALISGFMKHGRVEESMWYFERNP--FQNVISWTAAICGFVQNGFSFEALKL 171
P R T+L++ GR+ ++ +F+ P ++ + A + F + + A+ +
Sbjct: 88 PTRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSV 147
Query: 172 FLKLLESG-VKPNEVTFSSICKACAEINDFRLG--LSVFGLIFKAGFEKHVSVCNSLITL 228
F LL SG ++P++ +F+++ A ++++ + + K+G +SV N+LI L
Sbjct: 148 FHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 207
Query: 229 SLKMGEVDL---ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+K + AR V D M +D ++WT ++ ++ GD+ AR +F+E+ + +V W+
Sbjct: 208 YMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWN 267
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
MI+ Y QSG +AF LFR+M + F+ VLSA A+ G VH ++++
Sbjct: 268 AMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRL 327
Query: 346 GI----EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
E + ++NAL+ LYSK G+ + +FD++ KDV VSWN+++ GY +G +
Sbjct: 328 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDV---VSWNTILSGYIDSGCL 384
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
++A E+F MP +ND+SW ++SGY+ + +FN+M P T++ + A
Sbjct: 385 DKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 444
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+ +L+ G+ LH +++ GF G AL YAK G + +R VF MP+ + +SW
Sbjct: 445 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWN 504
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M+ L + G+ +E++ LF++M I P+ ++ L++L AC+H+GLVD+G YF SM+
Sbjct: 505 AMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRD 564
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
+ I P HY ++D+L RSGR+ EA D I +MPFEP + W ++LSGC+T + +
Sbjct: 565 FGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAY 624
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A L+++ +H Y+LLSN Y++AGRW+DA VRKLM ++G++K GCSW+EV +++H
Sbjct: 625 AADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIH 684
Query: 702 FFFQKTDHNPK 712
F +P+
Sbjct: 685 VFLVGDTKHPE 695
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 227/459 (49%), Gaps = 53/459 (11%)
Query: 87 LVVHNCMINANIQWGNLE---EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
L V N +I ++ E +A+++ D MP++++++WT ++ G+++ G V + FE
Sbjct: 198 LSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEE 257
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+ + W A I G+VQ+G +A +LF +++ V +E TF+S+ ACA F G
Sbjct: 258 VDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHG 317
Query: 204 LSVFGLIFK--AGF--EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
SV G I + F E + V N+L+TL K G++ +A+ +FD M +DVVSW IL
Sbjct: 318 KSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSG 377
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+I+ G L +A +F MP +N++SW VM++ Y G E+A +LF QM KP +
Sbjct: 378 YIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTY 437
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ ++A L AL+ G +HAH+++ G E NAL+ +Y+KCG D RLVF +
Sbjct: 438 AGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPN 497
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM------PKRNDVSWSAIISGYLEHKQFD 433
D VSWN+MI G +G EA ELFD M P R +S+ I++ D
Sbjct: 498 LD---SVSWNAMISALGQHGHGREALELFDQMVAEGIDPDR--ISFLTILTACNHAGLVD 552
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F F M K F + G+D + ++I
Sbjct: 553 EGFHYFESM--------KRDF-----------GISPGEDHYARLI--------------- 578
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESG 531
D +SG I +R + MP + S W ++ G +G
Sbjct: 579 DLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 617
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 169/417 (40%), Gaps = 92/417 (22%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIK--TGIHKERYLTTR--LLIMYLGS 69
E +F S + C + + G+++HG +I+ E L L+ +Y
Sbjct: 298 EFTFTSVLSAC-------ANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKG 350
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
K + A I +N D+V N +++ I G L++A +F MP +N++SW ++SG
Sbjct: 351 GKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSG-- 408
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+V G S +ALKLF ++ VKP + T++
Sbjct: 409 -----------------------------YVHGGLSEDALKLFNQMRAEDVKPCDYTYAG 439
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
AC E+ + G + + + GFE S N+L+T+ K G V+ AR VF M D
Sbjct: 440 AIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLD 499
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEM------PERNEVSWSVMIARYNQSGYPEEAFRL 303
VSW ++ + G EA +FD+M P+R +S+ ++ N +G +E F
Sbjct: 500 SVSWNAMISALGQHGHGREALELFDQMVAEGIDPDR--ISFLTILTACNHAGLVDEGFHY 557
Query: 304 FRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F M R + P ++ LIDL
Sbjct: 558 FESMKRDFGISPGEDHYA-----------------------------------RLIDLLG 582
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRN 415
+ G + R + ++ + + W +++ G NG ME A +LF +P+ +
Sbjct: 583 RSGRIGEARDLIKTMPFEPTPSI--WEAILSGCRTNGDMEFGAYAADQLFRMIPQHD 637
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/711 (32%), Positives = 377/711 (53%), Gaps = 52/711 (7%)
Query: 18 NSYIETC-LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEAN 76
N Y E LC +D S +L RA+H H+I +G + RLL MY S + A
Sbjct: 12 NRYAEKLQLCSPQDPASFSL---ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYAR 68
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
++ +++ D + +I A GNLE + +F+G P
Sbjct: 69 QLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTP---------------------- 106
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
Y + F N A I G+ NG AL+LF + +P++ TF+S+ A
Sbjct: 107 --LYMRDSVFYN-----AMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVL 159
Query: 197 I--NDFRLGLSVFGLIFKAGFE-KHVSVCNSLITLSLKMG-EVDL-------ARSVFDRM 245
N+ + G + + K G SV N+L+++ +K E+ + AR +FD M
Sbjct: 160 FVGNEQQCG-QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEM 218
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
KRD ++WT ++ ++ DL AR +F+ M E +W+ MI+ Y G +EA L R
Sbjct: 219 PKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCR 278
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD----VFISNALIDLY 361
+M + + ++ ++SA A++ + + G +HA++LK + + + +SNALI LY
Sbjct: 279 KMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLY 338
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
K + + R +F ++ V ++++WN+++ GY G+MEEAK F+ MP +N ++ +
Sbjct: 339 CKNNKVDEARKIFYAM---PVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTV 395
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ISG ++ D +F +M L G P F+ L A + + +LE G+ LH +++ LG
Sbjct: 396 MISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLG 455
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ + +G A+ YAK G +E++ VF MP + +SW M+ L + G+ ++I LF+
Sbjct: 456 YESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFD 515
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M K + P+ +T L+VL ACSH+GLV+KG YFNSM Y I P HY +VD+ R+
Sbjct: 516 QMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRA 575
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G S A I+SMP +P + W +LL+GC+ + N + A + L+KL ++ YVLLS
Sbjct: 576 GMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLS 635
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYA GRW D VRKLM ++ +RK CSW+EV N+VH F D +P+
Sbjct: 636 NIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPE 686
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 374/696 (53%), Gaps = 46/696 (6%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
LCL TS L RA+HG++I G ++ RL+ +Y S +
Sbjct: 21 LCLPLRRTSLQL---ARAVHGNIITFGFQPHAHILNRLIDVYCKSSE------------- 64
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
L+ A++LFD + E ++++ T ++SG+ G + + FE
Sbjct: 65 ------------------LDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEET 106
Query: 145 P--FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA-EINDFR 201
P ++ + + A I GF N + A+ LF K+ G KP++ T++S+ A ++D +
Sbjct: 107 PVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEK 166
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE----VDLARSVFDRMEKRDVVSWTVIL 257
+ K+G SV N+L+++ + + AR VFD + ++D SWT ++
Sbjct: 167 QCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMM 226
Query: 258 DVFIEMGDLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+++ G + + M E + V+++ MI+ Y G +EA + R+M + +
Sbjct: 227 TGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDE 286
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ V+ A A+ + L+ G VHA+VL+ + N+L+ LY KCG+ + R +F+
Sbjct: 287 FTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEK 345
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ KD+ VSWN+++ GY +G + EAK +F M ++N +SW +ISG E+ +
Sbjct: 346 MPAKDL---VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F+ M G P FS + + A + + G+ H +++K+GF + G AL Y
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMY 462
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
AK G +E +++VF MP + +SW ++ L + G+ E+++++EEM K I P+ +T L
Sbjct: 463 AKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFL 522
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
+VL ACSH+GLVD+G KYFNSME +Y I P HY ++D+L RSG+ SEAE I S+PF
Sbjct: 523 TVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPF 582
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
+P + W +LLSGC+ + N ++ A L+ L EH Y+LLSN+YA+ G+W + V
Sbjct: 583 KPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARV 642
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
RKLM ++G++K CSW+E+ QVH F +P+
Sbjct: 643 RKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 170/412 (41%), Gaps = 87/412 (21%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERY---LTTRLLIMYLGSR 70
E ++ S I C + L+ G+ +H ++++ +E + L+ +Y
Sbjct: 286 EFTYPSVIRAC-------ANARLLQLGKQVHAYVLR----REDFSFHFDNSLVTLYYKCG 334
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K EA I + + DLV N +++ + G++ EA+ +F M E+N +SW +IS
Sbjct: 335 KFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS---- 390
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G +NGF E LKLF + G +P + FS
Sbjct: 391 ---------------------------GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
K+CA + + G + K GF+ +S N+LIT+ K G V+ A+ VF M D
Sbjct: 424 IKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDS 483
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
VSW + +IA Q G+ EA ++ +M +
Sbjct: 484 VSW-------------------------------NALIAALGQHGHGVEAVDVYEEMLKK 512
Query: 311 SFKPNTSCFSIVLSALASLKALRSG---MHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
+P+ F VL+A + + G + V +I D + LIDL + G+
Sbjct: 513 GIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYAR--LIDLLCRSGKF 570
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRN 415
+ + +S+ K A + W +++ G ++G ME A +LF +P+ +
Sbjct: 571 SEAESIIESLPFKPTAEI--WEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 86/231 (37%), Gaps = 62/231 (26%)
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
I N+ + LC SL+ + +HG II GF + L D Y KS +++ +R+
Sbjct: 11 IANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQ 70
Query: 508 VFDRMPDKNEISWTVMVRGLAESG---------------------------------YAK 534
+FD + + ++I+ T MV G SG
Sbjct: 71 LFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGY 130
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACS------------HSGLVDKGLKYFNSMEPIY 582
+INLF +M+ P++ T SVL + H+ + G Y S+
Sbjct: 131 SAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVS--- 187
Query: 583 NIKPNGRHYTCVVDMLSRSGR----LSEAEDFINSMPFEPDSNAWASLLSG 629
+V + SR L A + +P E D +W ++++G
Sbjct: 188 ---------NALVSVYSRCASSPSLLHSARKVFDDIP-EKDERSWTTMMTG 228
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/711 (32%), Positives = 377/711 (53%), Gaps = 52/711 (7%)
Query: 18 NSYIETC-LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEAN 76
N Y E LC +D S +L RA+H H+I +G + RLL MY S + A
Sbjct: 12 NRYAEKLQLCSPQDPASFSL---ARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYAR 68
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
++ +++ D + +I A GNLE + +F+G P
Sbjct: 69 QLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTP---------------------- 106
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
Y + F N A I G+ NG AL+LF + +P++ TF+S+ A
Sbjct: 107 --LYMRDSVFYN-----AMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVL 159
Query: 197 I--NDFRLGLSVFGLIFKAGFE-KHVSVCNSLITLSLKMG-EVDL-------ARSVFDRM 245
N+ + G + + K G SV N+L+++ +K E+ + AR +FD M
Sbjct: 160 FVGNEQQCG-QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEM 218
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
KRD ++WT ++ ++ DL AR +F+ M E +W+ MI+ Y G +EA L R
Sbjct: 219 PKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCR 278
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD----VFISNALIDLY 361
+M + + ++ ++SA A++ + + G VHA++LK + + + +SNALI LY
Sbjct: 279 KMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLY 338
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
K + + R +F ++ V ++++WN+++ GY G+MEEAK F+ MP +N ++ +
Sbjct: 339 CKNNKVDEARKIFYAM---PVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTV 395
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ISG ++ D +F +M L G P F+ L A + + +LE G+ LH +++ LG
Sbjct: 396 MISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLG 455
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ + +G A+ YAK G +E++ VF MP + +SW M+ L + G+ ++I LF+
Sbjct: 456 YESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFD 515
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M K + P+ +T L+VL ACSH+GLV+KG YFNSM Y I P HY +VD+ R+
Sbjct: 516 QMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRA 575
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G S A I+SMP +P + W +LL+GC+ + N + A + L+KL ++ YVLLS
Sbjct: 576 GMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLS 635
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYA GRW + VRKLM ++ +RK CSW+EV N+VH F D +P+
Sbjct: 636 NIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPE 686
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 369/715 (51%), Gaps = 105/715 (14%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V +GR L+ ++K G + ++ T L+ M++ +A ++ +L DLV MI
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 97 NIQWGNLEEAQRLFDGMPER--------------------------------NEVSW--- 121
+ G ++A LF M E EV W
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 122 ----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
TA++S + K G +E+++ F+ +NV+SWTA I GF Q+G EA F K++E
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
SG++PN VTF SI AC+ + + G + I +AG+ G D
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY-----------------GSDDR 449
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
R T +L ++ + G L +A R+F+++ ++N V+W+ MI Y Q
Sbjct: 450 VR--------------TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQY 495
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+ A F+ + + KPN+S F+ +L+ S +L G VH ++K G+E D+ +SNAL
Sbjct: 496 DNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNAL 555
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+ ++ CG+ + AK LF++MPKR+ V
Sbjct: 556 VSMFVNCGD----------------------------------LMSAKNLFNDMPKRDLV 581
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW+ II+G+++H + + F F M SG P+K TF+ +L A AS +L +G+ LH I
Sbjct: 582 SWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALI 641
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+ F DV +GT L Y K G IE + +VF ++P KN SWT M+ G A+ G KE++
Sbjct: 642 TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEAL 701
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF +M++ + P+ +T + L AC+H+GL+++GL +F SM+ +NI+P HY C+VD+
Sbjct: 702 ELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDL 760
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
R+G L+EA +FI M EPDS W +LL C+ + N ++AE+A + +L +
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVF 820
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
V+LSNIYA+AG W + +RK+M ++G+ K G SW+EV +VH F+ +P+
Sbjct: 821 VILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQ 875
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 145/555 (26%), Positives = 270/555 (48%), Gaps = 71/555 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFERN 144
++ ++ I++ NL + +R+++ + + + W LI+ + K G + F+
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
++V SW + G+VQ+G EA KL ++++ VKP++ TF S+ ACA+ + G
Sbjct: 172 REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGR 231
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++ LI KAG++ + V +LI + +K G++ A VFD + RD+V+WT
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT---------- 281
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
MI + G ++A LF++M +P+ F +L
Sbjct: 282 ---------------------SMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLR 320
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A +AL G VHA + ++G + ++++ A++ +Y+KCG +D VFD + ++
Sbjct: 321 ACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN--- 377
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VVSW +MI G+ +G+++EA F FN+M+
Sbjct: 378 VVSWTAMIAGFAQHGRIDEA-------------------------------FLFFNKMIE 406
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
SG PN+ TF S+L A +S ++L++G+ + II+ G+ D + TAL YAK G ++
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKD 466
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ RVF+++ +N ++W M+ + ++ F+ + K I PN T S+L C
Sbjct: 467 AHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKS 526
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
S ++ G K+ + + ++ + +V M G L A++ N MP + D +W
Sbjct: 527 SDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWN 584
Query: 625 SLLSGCKTYKNEQIA 639
++++G + Q+A
Sbjct: 585 TIIAGFVQHGKNQVA 599
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 231/460 (50%), Gaps = 58/460 (12%)
Query: 191 CKACAEINDFRLGLSVFGLIFKAG-FEKHVSVC---------------NSLITLSLKMGE 234
C A+I D + +V + KAG F + + V ++L+ L +K
Sbjct: 66 CVVFADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125
Query: 235 VDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ +++ ++K D+ W +++++ + G+ A++IFD+M E++ SW++++
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y Q G EEAF+L QM + S KP+ F +L+A A + + G ++ +LK G + D
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+F+ ALI+++ KCG+ D VFD++ +D +V+W SMI G +G+ ++A LF
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPTRD---LVTWTSMITGLARHGRFKQACNLFQR 302
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
M + G P+K F S+L A +LE+G
Sbjct: 303 MEE-------------------------------EGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K +H ++ ++G+ ++++GTA+ Y K G +E + VFD + +N +SWT M+ G A+
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS-MEPIYNIKPNGR 589
G E+ F +M ++ I PN +T +S+L ACS + +G + + +E Y + R
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG--SDDR 449
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T ++ M ++ G L +A + + + AW ++++
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 203/436 (46%), Gaps = 88/436 (20%)
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ ++ R +++G EA ++ ++ + +S +L K L G ++ H+ K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
G++ D+F+ WN++I Y G A
Sbjct: 139 SGVQPDIFM----------------------------------WNTLINMYAKCGNTISA 164
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
K++FD+M +++ SW+ ++ GY++H ++ F + +M+ P+K TF S+L A A
Sbjct: 165 KQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADA 224
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+++KG++L+ I+K G+ D+F+GTAL + + K GDI + +VFD +P ++ ++WT M+
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMI 284
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF--------- 575
GLA G K++ NLF+ ME+ + P+++ +S+L AC+H +++G K
Sbjct: 285 TGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWD 344
Query: 576 ----------------NSMEPIYNIKP--NGRH---YTCVVDMLSRSGRLSEAEDFINSM 614
SME + GR+ +T ++ ++ GR+ EA F N M
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM 404
Query: 615 ---PFEPDSNAWASLLSGCKT----YKNEQIAERAVKNLWKLAEEHPAGY-------VLL 660
EP+ + S+L C + + +QI + ++ AGY L
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE----------AGYGSDDRVRTAL 454
Query: 661 SNIYASAGRWIDAMNV 676
++YA G DA V
Sbjct: 455 LSMYAKCGSLKDAHRV 470
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 369/715 (51%), Gaps = 105/715 (14%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V +GR L+ ++K G + ++ T L+ M++ +A ++ +L DLV MI
Sbjct: 227 VDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 97 NIQWGNLEEAQRLFDGMPER--------------------------------NEVSW--- 121
+ G ++A LF M E EV W
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 122 ----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
TA++S + K G +E+++ F+ +NV+SWTA I GF Q+G EA F K++E
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIE 406
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
SG++PN VTF SI AC+ + + G + I +AG+ G D
Sbjct: 407 SGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY-----------------GSDDR 449
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
R T +L ++ + G L +A R+F+++ ++N V+W+ MI Y Q
Sbjct: 450 VR--------------TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQY 495
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+ A F+ + + KPN+S F+ +L+ S +L G VH ++K G+E D+ +SNAL
Sbjct: 496 DNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNAL 555
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+ ++ CG+ + AK LF++MPKR+ V
Sbjct: 556 VSMFVNCGD----------------------------------LMSAKNLFNDMPKRDLV 581
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW+ II+G+++H + + F F M SG P+K TF+ +L A AS +L +G+ LH I
Sbjct: 582 SWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALI 641
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+ F DV +GT L Y K G IE + +VF ++P KN SWT M+ G A+ G KE++
Sbjct: 642 TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEAL 701
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF +M++ + P+ +T + L AC+H+GL+++GL +F SM+ +NI+P HY C+VD+
Sbjct: 702 ELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDL 760
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
R+G L+EA +FI M EPDS W +LL C+ + N ++AE+A + +L +
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVF 820
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
V+LSNIYA+AG W + +RK+M ++G+ K G SW+EV +VH F+ +P+
Sbjct: 821 VILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQ 875
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 263/564 (46%), Gaps = 98/564 (17%)
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
N I K D+ + N +IN + GN A+++FD M E++ SW L+ G
Sbjct: 134 NHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG-------- 185
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
+VQ+G EA KL ++++ VKP++ TF S+ ACA
Sbjct: 186 -----------------------YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACA 222
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ + G ++ LI KAG++ + V +LI + +K G++ A VFD + RD+V+WT
Sbjct: 223 DARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT- 281
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
MI + G ++A LF++M +P+
Sbjct: 282 ------------------------------SMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
F +L A +AL G VHA + ++G + ++++ A++ +Y+KCG +D VFD
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ ++ VVSW +MI G+ +G+++EA
Sbjct: 372 LVKGRN---VVSWTAMIAGFAQHGRIDEA------------------------------- 397
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F FN+M+ SG PN+ TF S+L A +S ++L++G+ + II+ G+ D + TAL
Sbjct: 398 FLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSM 457
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
YAK G ++ + RVF+++ +N ++W M+ + ++ F+ + K I PN T
Sbjct: 458 YAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTF 517
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
S+L C S ++ G K+ + + ++ + +V M G L A++ N MP
Sbjct: 518 TSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576
Query: 616 FEPDSNAWASLLSGCKTYKNEQIA 639
+ D +W ++++G + Q+A
Sbjct: 577 -KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 228/464 (49%), Gaps = 69/464 (14%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA+++ ++ S ++ T+S++ + C + + G ++ I K+G + + + N+LI
Sbjct: 93 EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLI 152
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ + + G+ A++IFD+M E++ SW++
Sbjct: 153 NM-------------------------------YAKCGNTISAKQIFDDMREKDVYSWNL 181
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
++ Y Q G EEAF+L QM + S KP+ F +L+A A + + G ++ +LK G
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ D+F+ ALI+++ KCG+ D VFD++ +D +V+W SMI G +G+ ++A
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD---LVTWTSMITGLARHGRFKQACN 298
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
LF M + G P+K F S+L A +
Sbjct: 299 LFQRMEE-------------------------------EGVQPDKVAFVSLLRACNHPEA 327
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
LE+GK +H ++ ++G+ ++++GTA+ Y K G +E + VFD + +N +SWT M+ G
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS-MEPIYNIK 585
A+ G E+ F +M ++ I PN +T +S+L ACS + +G + + +E Y
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG-- 445
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ R T ++ M ++ G L +A + + + AW ++++
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 206/436 (47%), Gaps = 88/436 (20%)
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ ++ R +++G EA ++ ++ + +S +L K L G ++ H+ K
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
G++ D+F+ N LI++Y+KC G A
Sbjct: 139 SGVQPDIFMRNTLINMYAKC----------------------------------GNTISA 164
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
K++FD+M +++ SW+ ++ GY++H ++ F + +M+ P+K TF S+L A A
Sbjct: 165 KQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADA 224
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+++KG++L+ I+K G+ D+F+GTAL + + K GDI + +VFD +P ++ ++WT M+
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMI 284
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF--------- 575
GLA G K++ NLF+ ME+ + P+++ +S+L AC+H +++G K
Sbjct: 285 TGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWD 344
Query: 576 ----------------NSMEPIYNIKP--NGRH---YTCVVDMLSRSGRLSEAEDFINSM 614
SME + GR+ +T ++ ++ GR+ EA F N M
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM 404
Query: 615 ---PFEPDSNAWASLLSGCKT----YKNEQIAERAVKNLWKLAEEHPAGY-------VLL 660
EP+ + S+L C + + +QI + ++ AGY L
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE----------AGYGSDDRVRTAL 454
Query: 661 SNIYASAGRWIDAMNV 676
++YA G DA V
Sbjct: 455 LSMYAKCGSLKDAHRV 470
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/596 (35%), Positives = 331/596 (55%), Gaps = 39/596 (6%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI+ + K G + + F++ +NV+SWTA I Q+ EA +L+ K+L++G+
Sbjct: 218 TALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGIS 277
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN VTF S+ +C G + I + G E V V N+LIT+ K +
Sbjct: 278 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQ----- 332
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE--- 298
+AR FD M +R+ +SWS MIA Y QSGY +
Sbjct: 333 --------------------------DARETFDRMSKRDVISWSAMIAGYAQSGYQDKES 366
Query: 299 --EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E F+L +M R PN F +L A + AL G +HA + K+G E D + A
Sbjct: 367 LDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTA 426
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
+ ++Y+KCG + VF + K+V V+W S++ Y G + A+++F M RN
Sbjct: 427 IFNMYAKCGSIYEAEQVFSKMENKNV---VAWASLLTMYIKCGDLTSAEKVFSEMSTRNV 483
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSW+ +I+GY + VF + + M + G P++ T S+L A ++++LE+GK +H +
Sbjct: 484 VSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAE 543
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+KLG D + T+L Y+K G++ +R VFD++ +++ ++W M+ G + G E+
Sbjct: 544 AVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEA 603
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
++LF+ M K + PNE+T +V+ AC +GLV +G + F M+ + +KP +HY C+VD
Sbjct: 604 VDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVD 663
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L R+GRL EAE+FI MP EPD + W +LL CK++ N Q+AE A ++ +L + +
Sbjct: 664 LLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASV 723
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YV LSNIYA AGRW D+ VRK+M +KGL+K G S +E+ ++H F + +P+
Sbjct: 724 YVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPE 779
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 233/506 (46%), Gaps = 97/506 (19%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL + + +GR +H H+ ER L T
Sbjct: 282 TFVSLLNSCNTPEALNRGRRIHSHI------SERGLET---------------------- 313
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
D+VV N +I + +++A+ FD M +R+ +SW+A+I+G+ + G Y +
Sbjct: 314 ---DVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSG-------YQD 363
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ E +L ++ GV PN+VTF SI KAC+
Sbjct: 364 KESLD-------------------EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQ 404
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + I K GFE S+ ++ + K G + A VF +ME ++VV+W +L ++I+
Sbjct: 405 GRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIK 464
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GDL A ++F EM RN VSW++MIA Y QSG + F L M F+P+ +
Sbjct: 465 CGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISI 524
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A +L AL G VHA +K+G+E D ++ +LI +YSKCGE + R VFD I +D
Sbjct: 525 LEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRD- 583
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
V+WN+M+ GYG +G EA +LF M K
Sbjct: 584 --TVAWNAMLAGYGQHGIGPEAVDLFKRMLKER--------------------------- 614
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF---PYDVFLGTALTDTYAKS 499
PN+ TF++V+ A +++G+++ +I++ F P G + D ++
Sbjct: 615 ----VPPNEITFTAVISACGRAGLVQEGREIF-RIMQEDFRMKPGKQHYG-CMVDLLGRA 668
Query: 500 GDIESSRRVFDRMPDKNEIS-WTVMV 524
G ++ + RMP + +IS W ++
Sbjct: 669 GRLQEAEEFIQRMPCEPDISVWHALL 694
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 216/467 (46%), Gaps = 72/467 (15%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA++L + + G+ N T+ I + CA++ F G V + + G + + NSLI
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
K G+V VF RM RDVV+ WS
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVT-------------------------------WSS 149
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MIA Y + +P +AF F +M + +PN F +L A + L +H V G
Sbjct: 150 MIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASG 209
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+E DV ++ ALI +YSKCGE +F + E++ VVSW ++I N Q
Sbjct: 210 METDVAVATALITMYSKCGEISLACEIFQKMKERN---VVSWTAIIQA---NAQ------ 257
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
H++ + F ++ +ML +G PN TF S+L + + +
Sbjct: 258 ----------------------HRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L +G+ +H I + G DV + AL Y K I+ +R FDRM ++ ISW+ M+ G
Sbjct: 296 LNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAG 355
Query: 527 LAESGYA-KESIN----LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
A+SGY KES++ L E M + + PN++T +S+L ACS G +++G + + +
Sbjct: 356 YAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKV 415
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ + T + +M ++ G + EAE + M + AWASLL+
Sbjct: 416 -GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLT 460
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 161/416 (38%), Gaps = 102/416 (24%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +LK + + QGR +H + K G +R L T + MY EA ++ +
Sbjct: 388 TFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM 447
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++V ++ I+ G+L A+++F M RN VSW +I+G+ + G +
Sbjct: 448 ENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIA------- 500
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ +L + G +P+ VT SI +AC ++
Sbjct: 501 ------------------------KVFELLSSMKVEGFQPDRVTIISILEACGALSALER 536
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V K G E V SLI + K GEV AR+VFD++ RD V+W
Sbjct: 537 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAW--------- 587
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+ M+A Y Q G EA LF++M + PN F+ V
Sbjct: 588 ----------------------NAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAV 625
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+SA R+G+ ++GR +F I+++D
Sbjct: 626 ISACG-----RAGL------------------------------VQEGREIF-RIMQEDF 649
Query: 383 ---AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDL 434
+ M+ G G+++EA+E MP D+S W A++ H L
Sbjct: 650 RMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQL 705
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + N +T+ ++ A + E GK +H ++ +LG D++LG +L + Y+K GD+ S
Sbjct: 73 GLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASV 132
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+VF RM ++ ++W+ M+ A + + ++ + FE M+ +I PN +T LS+L AC++
Sbjct: 133 EQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNY 192
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
+++K + +++ ++ + T ++ M S+ G +S A + M E + +W +
Sbjct: 193 SMLEKA-REIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMK-ERNVVSWTA 250
Query: 626 LLSG 629
++
Sbjct: 251 IIQA 254
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/638 (33%), Positives = 346/638 (54%), Gaps = 81/638 (12%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
YL + K A ++ + DL N M+ + L +A+ LFD MPE++ VSW A++
Sbjct: 74 YLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAML 133
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
SG+++ G V+E+ F+R P +N ISW + +V++G EA +LF ES
Sbjct: 134 SGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLF----ES------- 182
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
K+ +E + CN L+ +K + AR +FD++
Sbjct: 183 --------------------------KSDWE--LISCNCLMGGYVKRNMLGDARQLFDQI 214
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
RD++SW ++ + + GDL +ARR+F+E P R+ +W+ M+ Y Q G +EA R+F
Sbjct: 215 PVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFD 274
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
+M +K N +I Y++
Sbjct: 275 EMP---------------------------------------QKREMSYNVMIAGYAQYK 295
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
GR +F+ E ++ SWN MI GY NG + +A+ LFD MP+R+ VSW+AII+G
Sbjct: 296 RMDMGRELFE---EMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAG 352
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
Y ++ ++ + EM GE N+STF L A A +A+LE GK +HG++++ G+
Sbjct: 353 YAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKG 412
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+G AL Y K G I+ + VF + K+ +SW M+ G A G+ ++++ +FE M
Sbjct: 413 CLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMIT 472
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P+E+T++ VL ACSH+GL D+G +YF+SM Y I PN +HY C++D+L R+G L
Sbjct: 473 AGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLE 532
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EA++ I +MPFEPD+ W +LL + + N ++ E+A + ++K+ + YVLLSN+YA
Sbjct: 533 EAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYA 592
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
++GRW+D +R M + G++K+ G SWVEV+N++H F
Sbjct: 593 ASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTF 630
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 233/504 (46%), Gaps = 81/504 (16%)
Query: 29 KDITSQNLVIQGRALHGHLIKTG------IHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
KD+ S N ++ G GH+ + HK LL Y+ S + EA + +
Sbjct: 124 KDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESK 183
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ ++L+ NC++ ++ L +A++LFD +P R+ +SW +ISG+ + G + ++ FE
Sbjct: 184 SDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFE 243
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+P ++V +WTA + +VQ+G EA ++F ++ + E++++
Sbjct: 244 ESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQK----REMSYN-------------- 285
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
+ AG+ ++ +D+ R +F+ M ++ SW +++ + +
Sbjct: 286 -------VMIAGYAQY--------------KRMDMGRELFEEMPFPNIGSWNIMISGYCQ 324
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GDL +AR +FD MP+R+ VSW+ +IA Y Q+G EEA + +M R N S F
Sbjct: 325 NGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCA 384
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LSA A + AL G VH V++ G EK + NAL+ +Y KCG + VF + KD
Sbjct: 385 LSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKD- 443
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+VSWN+M+ GY +G +A VF M
Sbjct: 444 --IVSWNTMLAGYARHGFGRQA-------------------------------LTVFESM 470
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+ +G P++ T VL A + ++G + H G + + D ++G
Sbjct: 471 ITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGC 530
Query: 502 IESSRRVFDRMP-DKNEISWTVMV 524
+E ++ + MP + + +W ++
Sbjct: 531 LEEAQNLIRNMPFEPDAATWGALL 554
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 213/456 (46%), Gaps = 65/456 (14%)
Query: 212 KAGFEK-HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K FE H C I+ ++ G DLA VFD M R+ VS+ ++ ++ AR
Sbjct: 25 KPHFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLAR 84
Query: 271 RIFDE-------------------------------MPERNEVSWSVMIARYNQSGYPEE 299
+FD+ MPE++ VSW+ M++ Y +SG+ +E
Sbjct: 85 DLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDE 144
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL-KIGIEKDVFISNALI 358
A +F +M N+ ++ +L+A +RSG A L + + ++ N L+
Sbjct: 145 ARDVFDRMPH----KNSISWNGLLAAY-----VRSGRLEEARRLFESKSDWELISCNCLM 195
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
Y K D R +FD I +D ++SWN+MI GY +G + +A+ LF+ P R+ +
Sbjct: 196 GGYVKRNMLGDARQLFDQIPVRD---LISWNTMISGYAQDGDLSQARRLFEESPVRDVFT 252
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+A++ Y++ D VF+EM E+ +++ ++ A ++ G++L
Sbjct: 253 WTAMVYAYVQDGMLDEARRVFDEMPQKREM----SYNVMIAGYAQYKRMDMGREL---FE 305
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
++ FP ++ + Y ++GD+ +R +FD MP ++ +SW ++ G A++G +E++N
Sbjct: 306 EMPFP-NIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMN 364
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC----- 593
+ EM++ + N T L AC+ ++ G + + G C
Sbjct: 365 MLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHG------QVVRTGYEKGCLVGNA 418
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+V M + G + EA D + + D +W ++L+G
Sbjct: 419 LVGMYCKCGCIDEAYDVFQGVQHK-DIVSWNTMLAG 453
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/662 (32%), Positives = 340/662 (51%), Gaps = 71/662 (10%)
Query: 51 GIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF 110
G K + L + Y R + +++V F V+ C +++Q G +
Sbjct: 94 GYVKNGFWNKALRLYYQMQRTGINPDKLV-----FLSVIKACGSQSDLQAGRKVHEDIIA 148
Query: 111 DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALK 170
G E + + TAL S + K G +E + F+R P ++V+SW A I G+ QNG +EAL
Sbjct: 149 RGF-ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALA 207
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL 230
LF ++ +G+KPN T S+ CA + G + ++G E V V N L+ +
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNM-- 265
Query: 231 KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ + G++ A ++F+ MP R+ SW+ +I
Sbjct: 266 -----------------------------YAKCGNVNTAHKLFERMPIRDVASWNAIIGG 296
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y+ + EA F +M KPN+ VL A A L AL G +H + ++ G E +
Sbjct: 297 YSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESN 356
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+ NAL+++Y+KCG + A +LF+
Sbjct: 357 DVVGNALVNMYAKCGN----------------------------------VNSAYKLFER 382
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
MPK+N V+W+AIISGY +H A+F EM G P+ SVL A A +LE+G
Sbjct: 383 MPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQG 442
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K +HG I+ GF +V +GT L D YAK G++ +++++F+RMP+++ +SWT M+
Sbjct: 443 KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIH 502
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G+ ++++ LF +M++T + + ++L ACSH+GLVD+GL+YF M+ Y + P H
Sbjct: 503 GHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEH 562
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
Y C+VD+L R+G L EA I +M EPD+N W +LL C+ + N ++ E+A K+L++L
Sbjct: 563 YACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELD 622
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
++ YVLLSNIYA A RW D +RK+M EKG++K GCS V V V F +
Sbjct: 623 PDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTH 682
Query: 711 PK 712
P+
Sbjct: 683 PQ 684
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 244/480 (50%), Gaps = 67/480 (13%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N + W I G+V+NGF +AL+L+ ++ +G+ P+++ F S+ KAC +D + G V
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
I GFE DV+ T + ++ + G L
Sbjct: 144 EDIIARGFES-------------------------------DVIVGTALASMYTKCGSLE 172
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
AR++FD MP+R+ VSW+ +IA Y+Q+G P EA LF +M KPN+S V+ A
Sbjct: 173 NARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCA 232
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L AL G +H + ++ GIE DV + N L+++Y+KCG
Sbjct: 233 HLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN--------------------- 271
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+ A +LF+ MP R+ SW+AII GY + Q A FN M + G
Sbjct: 272 -------------VNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN T SVL A A + +LE+G+ +HG I+ GF + +G AL + YAK G++ S+ +
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYK 378
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+F+RMP KN ++W ++ G ++ G+ E++ LF EM+ I P+ I+SVL AC+H
Sbjct: 379 LFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA 438
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+++G K + + N T +VD+ ++ G ++ A+ MP E D +W +++
Sbjct: 439 LEQG-KQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMI 496
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 195/444 (43%), Gaps = 77/444 (17%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
L ++K SQ+ + GR +H +I G + + T L MY A ++ +
Sbjct: 124 LSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPK 183
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMP------------------------------ 114
D+V N +I Q G EA LF M
Sbjct: 184 RDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQI 243
Query: 115 ---------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
E + + L++ + K G V + FER P ++V SW A I G+ N
Sbjct: 244 HCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQH 303
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
EAL F ++ G+KPN +T S+ ACA + G + G ++GFE + V N+L
Sbjct: 304 HEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNAL 363
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+ + K G V+ A +F+RM K++VV+W I
Sbjct: 364 VNMYAKCGNVNSAYKLFERMPKKNVVAWNAI----------------------------- 394
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
I+ Y+Q G+P EA LF +M KP++ VL A A AL G +H + ++
Sbjct: 395 --ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRS 452
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G E +V + L+D+Y+KCG + +F+ + E+D VVSW +MI YG++G E+A
Sbjct: 453 GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQD---VVSWTTMILAYGIHGHGEDAL 509
Query: 406 ELFDNM----PKRNDVSWSAIISG 425
LF M K + ++++AI++
Sbjct: 510 ALFSKMQETGTKLDHIAFTAILTA 533
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 120/217 (55%), Gaps = 2/217 (0%)
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
+ N V W I GY+++ ++ ++ +M +G P+K F SV+ A S + L+ G+
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+H II GF DV +GTAL Y K G +E++R+VFDRMP ++ +SW ++ G +++G
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
E++ LF EM+ I PN T++SV+ C+H +++G K + I+ +
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG-KQIHCYAIRSGIESDVLVVN 260
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+V+M ++ G ++ A MP D +W +++ G
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIR-DVASWNAIIGG 296
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 157/380 (41%), Gaps = 102/380 (26%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ +HG+ I++G E+N++V N ++N
Sbjct: 340 QGQQIHGYAIRSG---------------------FESNDVVG----------NALVNMYA 368
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ GN+ A +LF+ MP++N V+W A+ISG+ +HG
Sbjct: 369 KCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGH------------------------- 403
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
EAL LF+++ G+KP+ S+ ACA G + G ++GFE +
Sbjct: 404 ------PHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESN 457
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V V L+ + K G V+ A+ +F+RM ++DVVSWT
Sbjct: 458 VVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWT------------------------ 493
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
MI Y G+ E+A LF +M K + F+ +L+A + + G+
Sbjct: 494 -------TMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ- 545
Query: 339 HAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+ +K G+ + L+DL + G + + ++ + A+V W +++G
Sbjct: 546 YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANV--WGALLGACR 603
Query: 397 LNGQME----EAKELFDNMP 412
++ +E AK LF+ P
Sbjct: 604 IHCNIELGEQAAKHLFELDP 623
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/698 (32%), Positives = 378/698 (54%), Gaps = 50/698 (7%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
LCL TS L RA+HG++I G ++ RL+ +Y S +
Sbjct: 21 LCLPLRRTSLQL---ARAVHGNIITFGFQPRAHILNRLIDVYCKSSE------------- 64
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
L A++LFD + E ++++ T ++SG+ G + + FE+
Sbjct: 65 ------------------LNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKA 106
Query: 145 P--FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI-NDFR 201
P ++ + + A I GF N + A+ LF K+ G KP+ TF+S+ A + +D +
Sbjct: 107 PVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEK 166
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE----VDLARSVFDRMEKRDVVSWTVIL 257
+ K+G SV N+L+++ K + AR VFD + ++D SWT ++
Sbjct: 167 QCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMM 226
Query: 258 DVFIEMG--DLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+++ G DLGE + + M + + V+++ MI+ Y G+ +EA + R+M +
Sbjct: 227 TGYVKNGYFDLGE--ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + V+ A A+ L+ G VHA+VL+ + N+L+ LY KCG+ + R +F
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+ + KD+ VSWN+++ GY +G + EAK +F M ++N +SW +ISG E+ +
Sbjct: 344 EKMPAKDL---VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F+ M G P FS + + A + + G+ H +++K+GF + G AL
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G +E +R+VF MP + +SW ++ L + G+ E+++++EEM K I P+ +T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L+VL ACSH+GLVD+G KYF+SME +Y I P HY ++D+L RSG+ S+AE I S+
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
PF+P + W +LLSGC+ + N ++ A L+ L EH Y+LLSN++A+ G+W +
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVA 640
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VRKLM ++G++K CSW+E+ QVH F +P+
Sbjct: 641 RVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 170/414 (41%), Gaps = 91/414 (21%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERY---LTTRLLIMYLGSR 70
E ++ S I C + L+ G+ +H ++++ +E + L+ +Y
Sbjct: 286 EFTYPSVIRAC-------ATAGLLQLGKQVHAYVLR----REDFSFHFDNSLVSLYYKCG 334
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K EA I + + DLV N +++ + G++ EA+ +F M E+N +SW +IS
Sbjct: 335 KFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS---- 390
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G +NGF E LKLF + G +P + FS
Sbjct: 391 ---------------------------GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
K+CA + + G + K GF+ +S N+LIT+ K G V+ AR VF M D
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQ 306
VSW ++ + G EA +++EM ++ + ++ ++ + +G ++ + F
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 307 M-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M T Y P ++ LIDL + G
Sbjct: 544 METVYRIPPGADHYA-----------------------------------RLIDLLCRSG 568
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRN 415
+ D V +S+ K A + W +++ G ++G ME A +LF +P+ +
Sbjct: 569 KFSDAESVIESLPFKPTAEI--WEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
I N+ + LC SL+ + +HG II GF + L D Y KS ++ +R+
Sbjct: 11 IANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQ 70
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+FD + + ++I+ T MV G SG + +FE+
Sbjct: 71 LFDEISEPDKIARTTMVSGYCASGDITLARGVFEK 105
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/714 (32%), Positives = 374/714 (52%), Gaps = 75/714 (10%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H LI G + ++ L+ MY ++ ++ + V N +I+A Q
Sbjct: 295 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 354
Query: 100 WGNLEEAQRLFDGMPE----------------------------------RNEVS----- 120
+G+ +A LF M E RN ++
Sbjct: 355 FGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIIL 414
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESG 179
+AL+ + K G VEE+ F +N +S+ A + G+VQ G + EAL+L+ + E G
Sbjct: 415 GSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG 474
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
++P++ TF+++ CA + G + + +A K++ V L+ +
Sbjct: 475 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHM----------- 523
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+ E G L A+ IF+ M ERN SW+ MI Y Q+G +E
Sbjct: 524 --------------------YSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQE 563
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A RLF+QM KP+ S +LS+ SL + G +H +++ +E++ + L+D
Sbjct: 564 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVD 623
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG V+D ++KDV + N M+ + +G+ +AK LFD M +RN W
Sbjct: 624 MYAKCGSMDYAWKVYDQTIKKDV---ILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALW 680
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
++I++GY F F EML S + T +++ +S+ +LE G LH IIK
Sbjct: 681 NSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIK 740
Query: 480 LGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
GF V L TAL D Y+K G I +R VFD M KN +SW M+ G ++ G +KE++
Sbjct: 741 KGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALI 800
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
L+EEM K + PNE+T L++L ACSH+GLV++GL+ F SM+ YNI+ HYTC+VD+L
Sbjct: 801 LYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLL 860
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
R+GRL +A++F+ MP EP+ + W +LL C+ +K+ + A + L++L ++P YV
Sbjct: 861 GRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYV 920
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++SNIYA+AGRW + ++R++M KG++K G SW+E+ +++ F + +PK
Sbjct: 921 IMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPK 974
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/667 (24%), Positives = 294/667 (44%), Gaps = 135/667 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L++D N +G+++H +I G + + YL T++L++Y S
Sbjct: 77 LIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS----------------- 119
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
C+ +L A++LF+ MPERN
Sbjct: 120 ----GCL-------DDLCYARKLFEEMPERN----------------------------- 139
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ +W I + + E L+L+ ++ SG ++ TF S+ KAC + D +
Sbjct: 140 --LTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQL 197
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ KAG ++ V +L+ + G +D A + D +E VV+W ++ ++++
Sbjct: 198 QSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKI--- 254
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+SW EEA+ +F +M + P+ F+ L
Sbjct: 255 ---------------LSW-------------EEAWGIFDRMLKIGVCPDNFTFASALRVC 286
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+L++ G VH+ ++ G + D F+ NALID+Y+KC + + VFD + E++ V
Sbjct: 287 GALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERN---QV 343
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+WNS IIS + F+ +F M SG
Sbjct: 344 TWNS-------------------------------IISAEAQFGHFNDALVLFLRMQESG 372
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
N+ S+L ASA +A + KG++LHG +++ D+ LG+AL D Y+K G +E +
Sbjct: 373 YKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAH 432
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME-KTSITPNELTILSVLFACSHS 565
+VF + ++NE+S+ ++ G + G A+E++ L+ +M+ + I P++ T ++L C++
Sbjct: 433 QVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQ 492
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
++G + ++ NI N T +V M S GRL+ A++ N M E ++ +W S
Sbjct: 493 RNDNQG-RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNS 550
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA-------GRWIDAMNVRK 678
++ G + Q A R K + +L P + L S + + GR + VR
Sbjct: 551 MIEGYQQNGETQEALRLFKQM-QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609
Query: 679 LMTEKGL 685
M E+G+
Sbjct: 610 TMEEEGI 616
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 250/532 (46%), Gaps = 83/532 (15%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+GR LHGHL++ ++ + L + L+ MY EA+++ + L + V +N ++ +
Sbjct: 395 KGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYV 454
Query: 99 QWGNLEEAQRLFDGM-------PE---------------------------------RNE 118
Q G EEA L+ M P+ +N
Sbjct: 455 QEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 514
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
+ T L+ + + GR+ + F R +N SW + I G+ QNG + EAL+LF ++ +
Sbjct: 515 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 574
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G+KP+ + SS+ +C ++D + G + I + E+ + L+ + K G +D A
Sbjct: 575 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYA 634
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
V+D+ K+DV+ V++ F+ G +A+ +FD+M +RN W+ ++A Y G +
Sbjct: 635 WKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKK 694
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNAL 357
E+F F +M + + +++ +SL AL G +H+ ++K G + V + AL
Sbjct: 695 ESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETAL 754
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+YSKCG R VFD++ K+ +VSWN+MI GY +G +EA L++ MPK+
Sbjct: 755 VDMYSKCGAITKARTVFDNMNGKN---IVSWNAMISGYSKHGCSKEALILYEEMPKK--- 808
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
G PN+ TF ++L A + +E+G +
Sbjct: 809 ----------------------------GMYPNEVTFLAILSACSHTGLVEEGLRI---F 837
Query: 478 IKLGFPYDVFLG----TALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMV 524
+ Y++ T + D ++G +E ++ ++MP + E+S W ++
Sbjct: 838 TSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 213/463 (46%), Gaps = 69/463 (14%)
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N + +SS+ + C + N F+ G S+ + G+ + ++ L + G +D
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD------ 123
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
DL AR++F+EMPERN +W+ MI Y + E R
Sbjct: 124 ----------------------DLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLR 161
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L+ +M + F V+ A +++ + + + V+K G+ ++F+ AL+D
Sbjct: 162 LYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVD--- 218
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
GY G M++A D + + V+W+A+
Sbjct: 219 -------------------------------GYARFGWMDDAVTSLDEIEGTSVVTWNAV 247
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I+GY++ ++ + +F+ ML G P+ TF+S L ++ S + GK +H K+I GF
Sbjct: 248 IAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGF 307
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D F+G AL D YAK D ES +VFD M ++N+++W ++ A+ G+ +++ LF
Sbjct: 308 KGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLR 367
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN-IKPNGRHYTCVVDMLSRS 601
M+++ N + S+L A + + KG + + + N + + + +VDM S+
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIGKGRELHGHL--VRNLLNSDIILGSALVDMYSKC 425
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
G + EA S+ E + ++ +LL+G Y E AE A++
Sbjct: 426 GMVEEAHQVFRSL-LERNEVSYNALLAG---YVQEGKAEEALE 464
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 154/685 (22%), Positives = 283/685 (41%), Gaps = 144/685 (21%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F S I+ C+ + +D+ R L ++K G++ ++ L+ Y +A
Sbjct: 177 TFPSVIKACIAM-EDMGGV------RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDA 229
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PER------------- 116
+ ++ G +V N +I ++ + EEA +FD M P+
Sbjct: 230 VTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 289
Query: 117 --------------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ ALI + K E + F+ +N ++W + I
Sbjct: 290 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 349
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
Q G +AL LFL++ ESG K N SI A A + D G + G + +
Sbjct: 350 SAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLN 409
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ + ++L+ + K G V+ A VF + +R+ VS+ +L
Sbjct: 410 SDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALL------------------- 450
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSG 335
A Y Q G EEA L+ M + +P+ F+ +L+ A+ + G
Sbjct: 451 ------------AGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQG 498
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+HAH+++ I K++ + L+ +YS+CG + +F+ + E++ SWNSMI GY
Sbjct: 499 RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN---AYSWNSMIEGY 555
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
NG+ +EA L F +M L+G P+ + S
Sbjct: 556 QQNGETQEALRL-------------------------------FKQMQLNGIKPDCFSLS 584
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE------------ 503
S+L + S++ +KG++LH I++ + L L D YAK G ++
Sbjct: 585 SMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKK 644
Query: 504 -------------------SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
++ +FD+M +N W ++ G A G KES N F EM
Sbjct: 645 DVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEML 704
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
++ I + LT+++++ CS ++ G + + + + + T +VDM S+ G +
Sbjct: 705 ESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAI 764
Query: 605 SEAEDFINSMPFEPDSNAWASLLSG 629
++A ++M + + +W +++SG
Sbjct: 765 TKARTVFDNMNGK-NIVSWNAMISG 788
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/635 (33%), Positives = 349/635 (54%), Gaps = 35/635 (5%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+K + + + N +I A + GNL A +FD +P+ N SW ++S + K G + +
Sbjct: 31 ILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQM 90
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF-LKLLESGVKPNEVTFSSICKACAE 196
F PF++ +SW AI G+ G +A++++ L L ++ + N +TFS++ C++
Sbjct: 91 QQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSK 150
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
LG + G I K GF V V + L+ + K+G + A+ FD M +R+VV +
Sbjct: 151 FRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTM 210
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + G + E++R+F + ER+ +SW++MI Q+G EA +FR+M F +
Sbjct: 211 ITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQ 270
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F VL+A SL AL G +HA+V++ + +VF+ +AL+D+YSKC K
Sbjct: 271 FTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIK-------- 322
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
A+ +F MP++N +SW+A++ GY ++ +
Sbjct: 323 --------------------------SAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAV 356
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F EM +G P+ T SV+ + A++ASLE+G H + + G + + AL Y
Sbjct: 357 KIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLY 416
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K G E+S R+F M ++E+SWT ++ G A+ G A E+I LFE M + P+ +T +
Sbjct: 417 GKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFI 476
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
VL ACS +GLV+KGL+YF SM + I P H TC++D+L R+GRL EA +FIN+MP
Sbjct: 477 GVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPC 536
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
PD WA+LLS C+ + + +I + A +L L ++PA YVLLS++YAS G+W +
Sbjct: 537 HPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQL 596
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R+ M +K +RK G SW++ + +VH F +P
Sbjct: 597 RRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSP 631
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 266/505 (52%), Gaps = 24/505 (4%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
++S+ K C E + + LI K + + N+LIT K+G + A VFD +
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ ++ SW IL V+ ++G L + ++IF+ MP R+ VSW++ I+ Y G +A R+++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 307 MTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M + + N FS +L + + + G ++ +LK G DVF+ + L+D+Y+K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
D + FD + E++ VV N+MI G G +EE++ LF + +R+ +SW+ +I+G
Sbjct: 188 LIYDAKRYFDEMPERN---VVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITG 244
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
+++ +F EM L+G ++ TF SVL A S+ +L +GK +H +I+ +
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
VF+G+AL D Y+K I+S+ VF RMP KN ISWT M+ G ++G+++E++ +F EM++
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P++ T+ SV+ +C++ +++G + F+ + + ++ + + G
Sbjct: 365 NGVEPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGSTE 423
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTY--KNEQIA--ERAVKNLWKLAEEHPAGYVLLS 661
+ M D +W +LL+G + NE I ER + + K P G +
Sbjct: 424 NSHRLFTEMNIR-DEVSWTALLAGYAQFGKANETIGLFERMLAHGLK-----PDGVTFIG 477
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLR 686
+ A + R + EKGL+
Sbjct: 478 VLSACS---------RAGLVEKGLQ 493
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 219/493 (44%), Gaps = 78/493 (15%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
+I+K G D+ V + +++ + G + +A+R FD MPERN V +I+G M+ G +EE
Sbjct: 163 QILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEE 222
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
S F ++ ISWT I G +QNG EAL +F ++ +G ++ TF S+ AC
Sbjct: 223 SQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGS 282
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ G + + + + +V V ++L+ + K + A +VF RM +++V+SWT +
Sbjct: 283 LLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAM 342
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
L Y Q+G+ EEA ++F +M R +P+
Sbjct: 343 L-------------------------------VGYGQNGFSEEAVKIFFEMQRNGVEPDD 371
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
V+S+ A+L +L G H L G+ + +SNALI LY KCG T++ +F
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLF-- 429
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
E ++ VSW +++ GY G+ E LF+
Sbjct: 430 -TEMNIRDEVSWTALLAGYAQFGKANETIGLFE--------------------------- 461
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDT 495
ML G P+ TF VL A + +EKG +IK G V T + D
Sbjct: 462 ----RMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDL 517
Query: 496 YAKSGDIESSRRVFDRMP-DKNEISWTVM-----VRGLAESG-YAKESINLFEEMEKTSI 548
++G +E +R + MP + + W + V G E G +A +S+ E
Sbjct: 518 LGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQ----- 572
Query: 549 TPNELTILSVLFA 561
P +LS L+A
Sbjct: 573 NPASYVLLSSLYA 585
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/635 (32%), Positives = 355/635 (55%), Gaps = 35/635 (5%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I++ L + ++N +IN + G+L+ A+ +FD +P+ N SW L+S + K G +++
Sbjct: 31 IIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDM 90
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAE 196
F+ P +V+SW + + G+ NG E+++++ +L+ G V N +TFS++ +
Sbjct: 91 QRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSN 150
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
LG + G IFK G++ ++ V + L+ + K G ++ A +F+ + ++++V + +
Sbjct: 151 RGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTM 210
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + + EA ++FD MPE++ +SW+ +I Q+G +EA F++M F +
Sbjct: 211 ITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQ 270
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F VL+A AL G +HA++++ + ++F+ +AL+D+Y KC K
Sbjct: 271 FTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVK-------- 322
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
A+ +F M +N +SW+A++ GY ++ +
Sbjct: 323 --------------------------YAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAV 356
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F +M + P+ T SV+ + A++ASLE+G HG+ + G V + AL Y
Sbjct: 357 RIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLY 416
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K G +E + ++F M ++E+SWT +V G A+ G A E+I+LFE M I P+ +T +
Sbjct: 417 GKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFV 476
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
VL ACS +GLV+KG YF M + I P HYTC++D+LSR+GRL EA++FIN MPF
Sbjct: 477 GVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPF 536
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
PD+ WA+LLS C+ N +I + A ++L KL ++PA Y+LLS+IYA+ G+W D +
Sbjct: 537 SPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKL 596
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
RK M E G++K G SW++ +N+VH F +P
Sbjct: 597 RKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSP 631
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 225/541 (41%), Gaps = 115/541 (21%)
Query: 32 TSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHN 91
+++ V GR +HG + K G ++ + L+ MY +
Sbjct: 149 SNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT---------------------- 186
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
G + +A R+F+ +PE+N V + +I+G ++ + E+ F+ P ++ IS
Sbjct: 187 ---------GFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSIS 237
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
WT I G QNG EA+ F ++ G ++ TF S+ AC G + I
Sbjct: 238 WTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYII 297
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ ++ ++ V ++L+ + K V A +VF +M ++V+SWT +L + + G EA R
Sbjct: 298 RTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVR 357
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
IF +M +RNE+ P+ V+S+ A+L +
Sbjct: 358 IFCDM-QRNEI------------------------------HPDDFTLGSVISSCANLAS 386
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G H L G+ V +SNALI LY KCG + +F + +D VSW ++
Sbjct: 387 LEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRD---EVSWTAL 443
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
+ GY G+ E LF+ ML G +P+
Sbjct: 444 VSGYAQFGKANETISLFET-------------------------------MLAHGIVPDG 472
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIK----LGFPYDVFLGTALTDTYAKSGDIESSRR 507
TF VL A + +EKG ++K P D + T + D +++G +E ++
Sbjct: 473 VTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIP-DHY--TCMIDLLSRAGRLEEAKN 529
Query: 508 VFDRMP-DKNEISWTVMVRGLAESG------YAKESINLFEEMEKTSITPNELTILSVLF 560
++MP + I W ++ +G +A ES++ E P +LS ++
Sbjct: 530 FINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQ-----NPASYILLSSIY 584
Query: 561 A 561
A
Sbjct: 585 A 585
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 181/364 (49%), Gaps = 42/364 (11%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+H +++ + F+ N LI+ Y K G+ K+ R VFD I + + + SWN+++ Y
Sbjct: 27 LHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPN---LFSWNTLLSAYSK 83
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSS 456
G +++ + +FD+MP + VSW++++SGY + V+N ML G + N+ TFS+
Sbjct: 84 LGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFST 143
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV-------- 508
+L S++ ++ G+ +HG+I K G+ +F+G+ L D YAK+G I + R+
Sbjct: 144 MLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKN 203
Query: 509 -----------------------FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
FD MP+K+ ISWT ++ GL ++G KE+++ F+EM
Sbjct: 204 IVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGI 263
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
++ T SVL AC +D+G K ++ + + N + ++DM + +
Sbjct: 264 EGFCMDQFTFGSVLTACGGFLALDEG-KQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVK 322
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA--EEHPAGYVLLSNI 663
AE M + + +W ++L G Y +E AV+ + E HP + L S I
Sbjct: 323 YAEAVFRKMRHK-NVISWTAMLVG---YGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVI 378
Query: 664 YASA 667
+ A
Sbjct: 379 SSCA 382
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 63/221 (28%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR------------------------ 506
K LH +II+ + FL L +TY K GD++++R
Sbjct: 25 KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84
Query: 507 -------RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTILSV 558
RVFD MP+ + +SW ++ G A +G ES+ ++ M K S+ N +T ++
Sbjct: 85 GYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTM 144
Query: 559 LFACSHSGLVDKGLK----------------------------YFNSMEPIYNIKP--NG 588
L S+ G VD G + + N I+ P N
Sbjct: 145 LILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNI 204
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
Y ++ L R + EAE ++MP E DS +W ++++G
Sbjct: 205 VVYNTMITGLLRCRFIVEAEQLFDNMP-EKDSISWTTIITG 244
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/658 (33%), Positives = 357/658 (54%), Gaps = 36/658 (5%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QGR LH ++K G+H + + N +IN
Sbjct: 287 QGRQLHSLVLKLGLHSNTF-------------------------------IQNSLINMYA 315
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ G++++AQ LFD P N +S ++ G+ K G+++ + F+ P + +S+T I G
Sbjct: 316 KRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMG 375
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
VQN EAL++F + GV PN++T ++ AC+ + + + K E
Sbjct: 376 LVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGL 435
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V V +L+ V AR +FDRM + ++VSW V+L+ + + G + AR +F+ +P+
Sbjct: 436 VLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPD 495
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
++ +SW MI Y EA ++R M R N ++SA L A+ G +
Sbjct: 496 KDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQL 555
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H V+K G + FI +I Y+ CG L F+ + KD H+ SWN+++ G+ N
Sbjct: 556 HGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFE-VGAKD--HLESWNALVSGFIKN 612
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
+++A+++FD+MP+R+ SWS +ISGY + Q + +F++M+ SG PN+ T SV
Sbjct: 613 RMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVF 672
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN-E 517
A A++ +L++G+ H I P + L AL D YAK G I S+ + F+++ DK
Sbjct: 673 SAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFS 732
Query: 518 IS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+S W ++ GLA G+A +++F +M++ +I PN +T + VL AC H+GLV+ G + F
Sbjct: 733 VSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFR 792
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
M+ YN++P+ +HY C+VD+L R+G L EAE+ I SMP + D W +LL+ C+T+ +
Sbjct: 793 IMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDV 852
Query: 637 QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
I ERA ++L LA H G VLLSNIYA AGRW D VR+ + + + + GCS V
Sbjct: 853 NIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMERMPGCSGV 910
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 231/482 (47%), Gaps = 39/482 (8%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E+ S K C+ + G + L+ K G + + NSLI + K G + A+ +FD
Sbjct: 272 ELALVSALKYCSSSSQ---GRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFD 328
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ +S +++ + + G L AR++FD MP++ VS++ MI Q+ EA +
Sbjct: 329 ACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEV 388
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F+ M PN V+ A + + + +HA +K+ +E V +S L+ Y
Sbjct: 389 FKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCL 448
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C + R +FD + E ++VSWN M+ GY G ++ A+ELF+ +P ++ +SW +I
Sbjct: 449 CSGVGEARRLFDRMPE---VNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMI 505
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
GY+ + ++ ML SG N+ +++ A + ++ G LHG ++K GF
Sbjct: 506 DGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFD 565
Query: 484 YDVFLGTALTDTYAKSG-------------------------------DIESSRRVFDRM 512
F+ T + YA G ++ +R++FD M
Sbjct: 566 CYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDM 625
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
P+++ SW+ M+ G A++ ++ ++ LF +M + I PNE+T++SV A + G + +G
Sbjct: 626 PERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEG- 684
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS-NAWASLLSGCK 631
++ + +I N ++DM ++ G ++ A F N + + S + W +++ G
Sbjct: 685 RWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLA 744
Query: 632 TY 633
++
Sbjct: 745 SH 746
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 210/484 (43%), Gaps = 66/484 (13%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
++ R +H IK + ++T L+ Y EA + + +LV N M+N
Sbjct: 417 ILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNG 476
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ G ++ A+ LF+ +P+++ +SW +I G++ R+
Sbjct: 477 YAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLH--------------------- 515
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
EAL ++ +L SG+ NE+ ++ AC +N G + G++ K GF+
Sbjct: 516 ----------EALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFD 565
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ + ++I G +DLA F+ K + SW ++ FI+ + +AR+IFD+M
Sbjct: 566 CYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDM 625
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
PER+ SWS MI+ Y Q+ A LF +M KPN V SA+A+L L+ G
Sbjct: 626 PERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGR 685
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
H ++ I + + ALID+Y+KCG F+ I +K + V WN++I G
Sbjct: 686 WAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFS-VSPWNAIICGLA 744
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
+G ++F +M + N PN TF
Sbjct: 745 SHGHASMCLDVFSDMQRYNIK-------------------------------PNPITFIG 773
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPY--DVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
VL A +E G+ + +I+K + D+ + D ++G +E + + MP
Sbjct: 774 VLSACCHAGLVEPGRRIF-RIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPM 832
Query: 515 KNEI 518
K +I
Sbjct: 833 KADI 836
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 126/231 (54%), Gaps = 3/231 (1%)
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
C ++SAL + G +H+ VLK+G+ + FI N+LI++Y+K G KD +L+FD+
Sbjct: 271 CELALVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDAC 330
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ +S N M+ GY GQ++ A++LFD MP + VS++ +I G ++++ F
Sbjct: 331 ---PTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALE 387
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
VF +M G +PN T +V+ A + + + +H IKL V + T L Y
Sbjct: 388 VFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYC 447
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+ +RR+FDRMP+ N +SW VM+ G A++G + LFE + +
Sbjct: 448 LCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDV 498
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/663 (32%), Positives = 361/663 (54%), Gaps = 7/663 (1%)
Query: 37 VIQGRALHGHLIKTGI-HKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
+ +GR LH +K+G+ H + RLL MY EA ++ +++ + N MI
Sbjct: 22 IYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIE 81
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
++ G+ ++ LFD MP ++ SW +ISGF K G +E + F P++N I+W +
Sbjct: 82 GYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSM 141
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVK---PNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
I G+ NG EA+ LF L + ++ + +++ AC + G + I
Sbjct: 142 IHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVV 201
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
E + +SL+ L K G++D A V + M++ D S + ++ + G + +ARRI
Sbjct: 202 DEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRI 261
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
F V W+ MI+ Y + EA LF M R + + S F+ VLSA ++L +
Sbjct: 262 FCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGII 321
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G+ VHAHV K+G D+ I +AL+D+YSKC D +F + D + NSMI
Sbjct: 322 DQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDT---ILLNSMI 378
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
Y G++++A+++FD MP ++ +SW+++I G+ ++ +F EM G +K
Sbjct: 379 TVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKF 438
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+ + V+ A AS++SLE G+ + + +G +D + T+L D Y K G +E R++FDRM
Sbjct: 439 SLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRM 498
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
+E+ W M+ G A +G+ E++N+F++M + P ++T + VL AC H GLV++G
Sbjct: 499 MKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGR 558
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
K+F +M+ Y+I P HY+C+VD+ +R+G L +A + I MP + D++ W+S+L GC
Sbjct: 559 KWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVA 618
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
+ N + ++ K + L E+ YV LS IYA+ W + VRKLM +K + K GCS
Sbjct: 619 HGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKVPGCS 678
Query: 693 WVE 695
W +
Sbjct: 679 WAD 681
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/556 (26%), Positives = 250/556 (44%), Gaps = 90/556 (16%)
Query: 29 KDITSQNLVIQGRA--------------------------LHGHLIK------TGIHKER 56
KD S N+VI G A +HG+ G+ K+
Sbjct: 102 KDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDL 161
Query: 57 YLT--------TRLLIMYLGSRKSLEA--------NEIVKDLNGFDLVVHNCMINANIQW 100
L T +L +G+ +L A IV D FD V+ + ++N +
Sbjct: 162 SLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKC 221
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+++ A + + M E + S +ALISG+ GR+ ++ F V+ W + I G+V
Sbjct: 222 GDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYV 281
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
N + EAL+LF + GV+ + TF+S+ AC+ + G+ V ++K GF +
Sbjct: 282 ANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDII 341
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ ++L+ + K D A +F ++ D + ++ V+ G + +AR+IFD MP ++
Sbjct: 342 IDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKS 401
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
+SW+ MI ++Q+ P EA LF +M + + + + V+SA AS+ +L G + A
Sbjct: 402 LISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFA 461
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
IG+E D IS +L+D Y KCG + GR +FD +++ D V WNSM+ GY NG
Sbjct: 462 RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSD---EVPWNSMLMGYATNGH 518
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
EA +FD M G P TF VL A
Sbjct: 519 GIEALNVFDQMRS-------------------------------VGVQPTDITFVGVLSA 547
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGDIESSRRVFDRMPDKN 516
+E+G+ + Y + G + + D YA++G +E + + ++MP K
Sbjct: 548 CDHCGLVEEGRKW---FYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKA 604
Query: 517 EIS-WTVMVRGLAESG 531
+ S W+ ++RG G
Sbjct: 605 DTSMWSSVLRGCVAHG 620
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 185/418 (44%), Gaps = 55/418 (13%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
++F S + C ++ ++ QG +H H+ K G + + + L+ MY R+ +
Sbjct: 306 STFASVLSAC-------STLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDD 358
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A ++ DL +D ++ N MI G +++A+++FD MP ++ +SW ++
Sbjct: 359 ACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSM---------- 408
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
I GF QN EAL LF ++ + G++ ++ + + + AC
Sbjct: 409 ---------------------IVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISAC 447
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A I+ LG +F G E + SL+ K G V+ R +FDRM K D V W
Sbjct: 448 ASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWN 507
Query: 255 VILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-R 309
+L + G EA +FD+M + ++++ +++ + G EE + F M
Sbjct: 508 SMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLD 567
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
Y P +S ++ A L M++ + ++ ++ D + ++++ G
Sbjct: 568 YHINPGIEHYSCMVDLYARAGLLEDAMNL---IEQMPLKADTSMWSSVLRGCVAHGNNIL 624
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGY------GLNGQMEEAKELFD-NMPKRNDVSWS 420
G+ V I++ D + ++ + G Y G + Q+ K ++D +PK SW+
Sbjct: 625 GKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVR--KLMYDKKIPKVPGCSWA 680
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/666 (32%), Positives = 354/666 (53%), Gaps = 108/666 (16%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+L V N ++ + G +E+A RLFDGM NEVS+TA++ G ++ G V+
Sbjct: 174 NLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVD---------- 223
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE--------I 197
+AL+LF ++ SGV+ + V SS+ +CA+ +
Sbjct: 224 ---------------------DALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVV 262
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
FRLG + LI + GF V NSLI + K ++D A VFD + VSW +++
Sbjct: 263 RAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILI 322
Query: 258 DVFIEMG-----------------------------------DLGEARRIFDEMPERNEV 282
F + G D+ AR +FD++ +
Sbjct: 323 TGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVT 382
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+W+ +++ Y Q ++ LFR+M + +P+ + +++LS+ + L L G VH+
Sbjct: 383 TWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSAS 442
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
++ + D+F+++ L+D+YSKCG+ R++F+ + E+D VV WNSMI G ++ E
Sbjct: 443 VRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERD---VVCWNSMISGLAIHSLNE 499
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
EA F F +M +G +P +S+++S++ + A
Sbjct: 500 EA-------------------------------FDFFKQMRGNGMMPTESSYASMINSCA 528
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
++S+ +G+ +H +I+K G+ +V++G+AL D YAK G+++ +R FD M KN ++W
Sbjct: 529 RLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNE 588
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M+ G A++G+ +++++LFE M T P+ +T ++VL CSHSGLVD+ + +FNSME Y
Sbjct: 589 MIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTY 648
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
I P HYTC++D L R+GRL E E I++MP + D W LL+ C + N ++ E A
Sbjct: 649 GITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECA 708
Query: 643 VKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHF 702
K+L++L ++P+ YVLLSNIYAS GR DA VR LM+ +G+ K G SW++ ++ VH
Sbjct: 709 AKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHA 768
Query: 703 FFQKTD 708
F D
Sbjct: 769 FMVADD 774
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 142/594 (23%), Positives = 267/594 (44%), Gaps = 68/594 (11%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
+A R F +P N S+ A +S + G ++ + + P +NV+SW I ++
Sbjct: 61 DALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSER 120
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
+ EAL+L+ +L G+ P T +S+ AC + G GL K G ++++ V N+
Sbjct: 121 AGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENA 180
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ + K G V+ A +FD M + VS+T ++ ++ G + +A R+F
Sbjct: 181 LLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLF----------- 229
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
AR +SG + + + SC S ++A R G +HA +++
Sbjct: 230 ----ARMCRSGVRVDPVAVSSVL--------GSCAQACASEFDVVRAFRLGQCIHALIVR 277
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ---- 400
G D + N+LID+Y+KC + + VFDS+ VSWN +I G+G G
Sbjct: 278 KGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPN---ISTVSWNILITGFGQAGSYAKA 334
Query: 401 ------MEE-------------------------AKELFDNMPKRNDVSWSAIISGYLEH 429
MEE A+ +FD + + + +W+ ++SGY +
Sbjct: 335 LEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQE 394
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+ +F M P+++T + +L + + + L+ G +H ++ D+F+
Sbjct: 395 ELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVA 454
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
+ L D Y+K G I +R +F+RM +++ + W M+ GLA +E+ + F++M +
Sbjct: 455 SGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMM 514
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P E + S++ +C+ V +G + ++ N + ++DM ++ G + +A
Sbjct: 515 PTESSYASMINSCARLSSVPQG-RQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARV 573
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL--AEEHPAGYVLLS 661
F + M + AW ++ G Y E+AV + E+ P G ++
Sbjct: 574 FFDCM-VTKNIVAWNEMIHG---YAQNGFGEKAVDLFEYMLTTEQRPDGVTFIA 623
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 224/498 (44%), Gaps = 77/498 (15%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H +++ G ++++ L+ MY + EA ++ L V N +I Q
Sbjct: 268 GQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQ 327
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
G+ +A + + M E NEV+++ +++ +K V + F++ +V +W
Sbjct: 328 AGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTL 387
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
+ G+ Q + ++LF ++ V+P+ T + I +C+ + LG V +
Sbjct: 388 LSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLL 447
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ V + L+ + K G++ +AR +F+RM +RDV
Sbjct: 448 HNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDV------------------------- 482
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
V W+ MI+ EEAF F+QM P S ++ ++++ A L ++ G
Sbjct: 483 ------VCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQG 536
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+HA ++K G +++V++ +ALID+Y+KCG D R+ FD +V K+ +V+WN MI GY
Sbjct: 537 RQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKN---IVAWNEMIHGY 593
Query: 396 GLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
NG E+A +LF+ M + + V++ A+++G D A FN M +
Sbjct: 594 AQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSM--------E 645
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
ST+ I L Y T L D ++G + + D
Sbjct: 646 STYG---------------------ITPLAEHY-----TCLIDGLGRAGRLVEVEALIDN 679
Query: 512 MPDKNE-ISWTVMVRGLA 528
MP K++ I W V++ A
Sbjct: 680 MPCKDDPIVWEVLLAACA 697
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 170/361 (47%), Gaps = 42/361 (11%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ AG + N L+ L G A F + + + S+ L GDL A
Sbjct: 34 VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R + DEMP+RN VSW+ +IA +S EA L+ M R P + VLSA ++
Sbjct: 94 RALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAV 153
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
AL G H +K+G+++++F+ NAL+ +Y+KCG +D +FD + + VS+
Sbjct: 154 AALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPN---EVSFT 210
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+M+GG G +++A LF M + SG
Sbjct: 211 AMMGGLVQAGSVDDALRLFARMCR-------------------------------SGVRV 239
Query: 450 NKSTFSSVL--CASAS------VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+ SSVL CA A V + G+ +H I++ GF D +G +L D Y K
Sbjct: 240 DPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQ 299
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + +VFD +P+ + +SW +++ G ++G +++ + ME++ PNE+T ++L +
Sbjct: 300 MDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLAS 359
Query: 562 C 562
C
Sbjct: 360 C 360
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 172/357 (48%), Gaps = 37/357 (10%)
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
VL G+ D F+ N L++LYS G D F S+ + S+N+ + G +
Sbjct: 34 VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNA---YSYNAALSAARRAGDL 90
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+ A+ L D MP RN VSW+ +I+ ++ ++ ML G +P T +SVL A
Sbjct: 91 DAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSAC 150
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+VA+L+ G+ HG +K+G ++F+ AL Y K G +E + R+FD M NE+S+T
Sbjct: 151 GAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFT 210
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS------------------ 563
M+ GL ++G +++ LF M ++ + + + + SVL +C+
Sbjct: 211 AMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQC 270
Query: 564 -HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
H+ +V KG F S + + N ++DM ++ ++ EA +S+P + +
Sbjct: 271 IHALIVRKG---FGSDQHVGN---------SLIDMYTKCMQMDEAVKVFDSLP-NISTVS 317
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
W L++G + A V NL + + P V SN+ AS + D ++ R +
Sbjct: 318 WNILITGFGQAGSYAKALE-VLNLMEESGSEP-NEVTYSNMLASCIKARDVLSARAM 372
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 102/282 (36%), Gaps = 110/282 (39%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E+S+ S I +C L + V QGR +H ++K G + Y+ + L+ MY
Sbjct: 517 ESSYASMINSCARL-------SSVPQGRQIHAQIVKDGYDQNVYVGSALIDMY------- 562
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ GN+++A+ FD M +N V+W +I G
Sbjct: 563 ------------------------AKCGNMDDARVFFDCMVTKNIVAWNEMIHG------ 592
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ QNGF +A+ LF +L + +P+ VTF ++
Sbjct: 593 -------------------------YAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTG 627
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS- 252
C+ G VD A + F+ ME ++
Sbjct: 628 CSH-----------------------------------SGLVDEAIAFFNSMESTYGITP 652
Query: 253 ----WTVILDVFIEMGDLGEARRIFDEMPERNE-VSWSVMIA 289
+T ++D G L E + D MP +++ + W V++A
Sbjct: 653 LAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLA 694
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/647 (33%), Positives = 358/647 (55%), Gaps = 50/647 (7%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y+ + + EA + K + + V +N MI+ ++ G E A++LFD MPER+ VSW +I
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G++++ + ++ FE P ++V SW + G+ QNG +A +F ++ E N+V
Sbjct: 134 KGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDV 189
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+++++ A + + ++FK+ + N L+ +K ++ AR FD M
Sbjct: 190 SWNALLSAYVQNSKMEEAC----MLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
RDVVSW I+ + + G + EAR++FDE P ++ +W+ M++ Y Q+ EEA LF
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
+M E++ NA++ Y +
Sbjct: 306 KMP---------------------------------------ERNEVSWNAMLAGYVQGE 326
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ + +FD + ++V+ +WN+MI GY G++ EAK LFD MPKR+ VSW+A+I+G
Sbjct: 327 RMEMAKELFDVMPCRNVS---TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
Y + +F +M G N+S+FSS L A V +LE GK LHG+++K G+
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
F+G AL Y K G IE + +F M K+ +SW M+ G + G+ + ++ FE M++
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P++ T+++VL ACSH+GLVDKG +YF +M Y + PN +HY C+VD+L R+G L
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
+A + + +MPFEPD+ W +LL + + N ++AE A ++ + E+ YVLLSN+YA
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
S+GRW D +R M +KG++K G SW+E++N+ H F + +P+
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 670
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 237/518 (45%), Gaps = 70/518 (13%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHG------HLIKTGIHKERYLT 59
R LF I PE +D+ S N ++ G A +G + K
Sbjct: 146 RELFEIMPE--------------RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSW 191
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
LL Y+ + K EA + K + LV NC++ ++ + EA++ FD M R+ V
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV 251
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +I+G+ + G+++E+ F+ +P Q+V +WTA + G++QN EA +LF K+ E
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER- 310
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
NEV+++++ + + +F ++ ++VS N++IT + G++ A+
Sbjct: 311 ---NEVSWNAMLAGYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYAQCGKISEAK 363
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
++FD+M KRD VSW MIA Y+QSG+ E
Sbjct: 364 NLFDKMPKRDPVSWAA-------------------------------MIAGYSQSGHSFE 392
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A RLF QM R + N S FS LS A + AL G +H ++K G E F+ NAL+
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRN 415
+Y KCG ++ +F + KD +VSWN+MI GY +G E A F++M K +
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKD---IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLH 474
D + A++S D F M G +PN ++ ++ LE D H
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE---DAH 566
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+ + F D + L G+ E + D++
Sbjct: 567 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKI 604
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/649 (34%), Positives = 370/649 (57%), Gaps = 38/649 (5%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L+ N I N + GN++EA+ +F MP +N SWTA+++ F ++G+++ + F+ P
Sbjct: 41 LIQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQ 100
Query: 147 QNVISWTAAICGFVQNGFSF-EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ +S A I +++NG + +A +LF L E N V+++++ + F +
Sbjct: 101 RTTVSNNAMISAYIRNGCNVGKAYELFSVLAER----NLVSYAAMIMGFVKAGKFHMAEK 156
Query: 206 VFGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++ + +E C N+LI LKMGEV+ A +F+ M +RDVVSW+ ++D G
Sbjct: 157 LYR---ETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDG 213
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSCFSIVL 323
+ AR +FD MP+RN VSWS MI Y G+ +E F LF M R + N++ +I+
Sbjct: 214 RVAAARDLFDRMPDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMF 273
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD-- 381
A + + GM +H V ++G E D +SN++I +YS G T VF ++ +KD
Sbjct: 274 KACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIV 333
Query: 382 --------------------------VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
V V+SW +MI G+ +G++E A ELF+ +P ++
Sbjct: 334 TWNSLISGYIHNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKD 393
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
D W+AIISG++ + +++ + M+ G PN T SSVL ASA++ +L +G +H
Sbjct: 394 DFVWTAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHT 453
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
I+K+ Y++ + +L Y+KSG++ + R+F + + N IS+ ++ G A++G+ E
Sbjct: 454 CILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDE 513
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
++ ++++M+ PN +T L+VL AC+H+GLVD+G FN+M+ Y I+P HY C+V
Sbjct: 514 ALGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMV 573
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
D+L R+G L EA D I SMPF+P S W ++L KT+ +A+ A + + L ++
Sbjct: 574 DILGRAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNAT 633
Query: 656 GYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
YV+LSN+Y++AG+ ID V+ KG++KS GCSW+ ++N+VH F
Sbjct: 634 PYVVLSNMYSAAGKKIDGDLVKMAKNLKGIKKSPGCSWITMKNKVHLFL 682
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 201/393 (51%), Gaps = 39/393 (9%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D N +IN ++ G + EA R+F+ M ER+ VSW+A++ G + GRV + F+R P
Sbjct: 167 DPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMP 226
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGL 204
+NV+SW+A I G++ GF E LF+ + G V+ N T + + KAC G+
Sbjct: 227 DRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGM 286
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ GL+ + GFE + NS+IT+ +G D+A VF + +D+V+W ++ +I
Sbjct: 287 QIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNN 346
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR------------------- 305
++ A R+F MP ++ +SW+ MIA +++SG E A LF
Sbjct: 347 EVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISGFVN 406
Query: 306 ------------QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
+M KPN S VL+A A+L AL G+ +H +LK+ +E ++ I
Sbjct: 407 NNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYNLSI 466
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
N+LI YSK G D +F ++E + V+S+NS+I G+ NG +EA ++ M
Sbjct: 467 QNSLISFYSKSGNVVDAYRIFLDVIEPN---VISYNSIISGFAQNGFGDEALGIYKKMQS 523
Query: 414 R----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
N V++ A++S D + +FN M
Sbjct: 524 EGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTM 556
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 199/444 (44%), Gaps = 71/444 (15%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +HG + + G + L+ ++ MY + A+++ ++ D+V N +I+ I
Sbjct: 284 EGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYI 343
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+E A R+F MP ++ +SWTA+I+GF K GRVE ++ F P ++ WTA I G
Sbjct: 344 HNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISG 403
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
FV N EAL + +++ G KPN +T SS+ A A + GL + I K E +
Sbjct: 404 FVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYN 463
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+S+ NSLI+ K G V +D + RIF ++ E
Sbjct: 464 LSIQNSLISFYSKSGNV---------------------VDAY----------RIFLDVIE 492
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N +S++ +I+ + Q+G+ +EA ++++M +PN F VLSA
Sbjct: 493 PNVISYNSIISGFAQNGFGDEALGIYKKMQSEGHEPNHVTFLAVLSAC-----------T 541
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HA ++ G I N + Y +E + H ++G GL
Sbjct: 542 HAGLVDEGWN----IFNTMKSHYG---------------IEPEADHYACMVDILGRAGL- 581
Query: 399 GQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
++EA +L +MP K + W AI+ H + DL A ++ P +T V
Sbjct: 582 --LDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDL--AKLAAQRITDLEPKNATPYVV 637
Query: 458 LCASASVASLEKGKDLHGKIIKLG 481
L S A GK + G ++K+
Sbjct: 638 LSNMYSAA----GKKIDGDLVKMA 657
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/630 (33%), Positives = 356/630 (56%), Gaps = 43/630 (6%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+L+EA+ +F MP +N +SWTA+++ + ++G + ++ FE+ P + S+ A I +
Sbjct: 45 GDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYT 104
Query: 161 QNGFSF--EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL--SVFGLIFKAGFE 216
++ EA KLF ++ E N ++++++ A R G+ + L + E
Sbjct: 105 RSNPMMIGEASKLFAEMRER----NSISYAAMITGLA-----RAGMVDNAEELYLETPVE 155
Query: 217 KHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
VC N+LI+ LK+G ++ A +F+ M +RDV+SW+ ++D + + G +G AR +F+
Sbjct: 156 WRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFER 215
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSCFSIVLSALASLKALRS 334
MPERN V+W+ MI + + G E F LF +M + F K N + +++ A + +
Sbjct: 216 MPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKE 275
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA----------- 383
G+ +H V ++G E DVF+ NA+I +Y + + R +FD + KDV
Sbjct: 276 GIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQ 335
Query: 384 -----------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
V+SW +MI G+ G+M ++ ELF MPK++D++W+A+ISG+
Sbjct: 336 NDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGF 395
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+ + +++ F EML PN T SSVL ASA +A+L +G +H ++K+G +D+
Sbjct: 396 VGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDL 455
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ +L Y K G++ ++F + N +S+ M+ G A++G+ +E++ LF +M
Sbjct: 456 SIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNE 515
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
PNE+T L VL AC+H GL+++G YF SM+ +Y I+P HY C+VD+L R+G L +
Sbjct: 516 GQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDD 575
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A D I SMP EP S W +LL + + +A+ A + ++KL ++ A Y +LS +Y+S
Sbjct: 576 AIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSS 635
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEV 696
AGR D+ VR KG++KS G SW+ V
Sbjct: 636 AGRNRDSEQVRMAQGLKGVKKSAGYSWIIV 665
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 229/488 (46%), Gaps = 104/488 (21%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
L+ YL + EA I + + D++ + M++ + G + A+ LF+ MPERN V+W
Sbjct: 165 LISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTW 224
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-V 180
TA+I G MK G E GF LFL++ + G V
Sbjct: 225 TAMIDGHMKMGCYE---------------------VGF----------GLFLRMRKEGFV 253
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K N T + + +AC+E +++ G+ + GL+ + GFE V + N++I + + V AR
Sbjct: 254 KVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 313
Query: 241 VFDRM-------------------------------EKRDVVSWTVILDVFIEMGDLGEA 269
+FD M +++DV+SWT ++ F G +G++
Sbjct: 314 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKS 373
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F MP++++++W+ +I+ + +G EEA F +M R +PN S VLSA A L
Sbjct: 374 IELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGL 433
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G+ +H V+K+G+E D+ I N+L+ +Y+KCG DG +F SI + ++VS+N
Sbjct: 434 ATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSI---NSPNIVSFN 490
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SMI G+ NG EEA ELF HK ML G+ P
Sbjct: 491 SMITGFAQNGFGEEALELF--------------------HK-----------MLNEGQKP 519
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGDIESS 505
N+ TF VL A V LE+G + + L Y + G + D ++G ++ +
Sbjct: 520 NEITFLGVLSACTHVGLLEQGWNYFKSMKSL---YQIEPGPHHYACIVDLLGRAGFLDDA 576
Query: 506 RRVFDRMP 513
+ MP
Sbjct: 577 IDLIRSMP 584
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 216/392 (55%), Gaps = 27/392 (6%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
C+S IT + G++ A S+F RM ++ +SWT +L + E G + +AR++F++MP+R
Sbjct: 34 CHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTT 93
Query: 282 VSWSVMIARYNQSG--YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
S++ MI Y +S EA +LF +M + N+ ++ +++ LA R+GM +
Sbjct: 94 ASYNAMITAYTRSNPMMIGEASKLFAEMR----ERNSISYAAMITGLA-----RAGMVDN 144
Query: 340 AH--VLKIGIE-KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
A L+ +E +D SNALI Y K G ++ +F+ + E+D V+SW+SM+ GY
Sbjct: 145 AEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERD---VISWSSMVDGYC 201
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFS 455
G++ A+ELF+ MP+RN V+W+A+I G+++ +++ F +F M G + N +T +
Sbjct: 202 KKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLT 261
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+ A + ++G +HG + ++GF +DVFLG A+ Y + + +R++FD M K
Sbjct: 262 VMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRK 321
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ +SW ++ G ++ +E LFE+ ++ + ++ +++ S+ G + K ++ F
Sbjct: 322 DVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDV----ISWTTMITGFSNKGKMGKSIELF 377
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
M K + +T V+ +G EA
Sbjct: 378 RMMP-----KQDDIAWTAVISGFVGNGEYEEA 404
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 174/368 (47%), Gaps = 34/368 (9%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +HG + + G + +L ++IMY +EA +I +N D+V N +I +
Sbjct: 275 EGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYV 334
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
Q +EE LF+ +++ +SWT +I+GF G++ +S+ F P Q+ I+WTA I G
Sbjct: 335 QNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISG 394
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
FV NG EA+ F+++L V+PN +T SS+ A A + GL + L+ K G E
Sbjct: 395 FVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFD 454
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+S+ NSL+++ K G V + +IF +
Sbjct: 455 LSIQNSLVSMYTKCGNV-------------------------------ADGHQIFTSINS 483
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N VS++ MI + Q+G+ EEA LF +M KPN F VLSA + L G +
Sbjct: 484 PNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNY 543
Query: 339 HAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+ + IE ++DL + G D + S+ + H W +++G +
Sbjct: 544 FKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCE--PHSGVWGALLGASRI 601
Query: 398 NGQMEEAK 405
+ +++ AK
Sbjct: 602 HLRLDVAK 609
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 59/248 (23%)
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM-- 442
+V +S I +G NG ++EA+ +F MP +N +SW+A+++ Y E+ +F +M
Sbjct: 31 LVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQ 90
Query: 443 ------------------LLSGEIP---------NKSTFSSVLCASASVASLEKGKDL-- 473
++ GE N ++++++ A ++ ++L
Sbjct: 91 RTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYL 150
Query: 474 ------------------HGKIIKLGFPYDVFLG---------TALTDTYAKSGDIESSR 506
+ K+ +L +F G +++ D Y K G I +R
Sbjct: 151 ETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHAR 210
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF-ACSHS 565
+F+RMP++N ++WT M+ G + G + LF M K T L+V+F ACS
Sbjct: 211 ELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEF 270
Query: 566 GLVDKGLK 573
G +G++
Sbjct: 271 GEYKEGIQ 278
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/707 (31%), Positives = 372/707 (52%), Gaps = 59/707 (8%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
+C L+ S +L R +H H+I +G ++ RL+ +Y S K
Sbjct: 20 ICCLQSPISYSL---ARPVHAHMIASGFQPRGHILNRLIDIYSKSSK------------- 63
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
L A+ LFD +P+ + V+ T LI+ + G ++ S F
Sbjct: 64 ------------------LNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDT 105
Query: 145 PF--QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF-R 201
P ++ + + A I + N A++LF + +P+ TF+S+ A A + + +
Sbjct: 106 PLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEK 165
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLK------------MGEVDLARSVFDRMEKRD 249
+ + K+G SV N+LI+ +K M E AR +FD M RD
Sbjct: 166 HCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAE---ARKLFDEMPNRD 222
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+SWT I+ +++ DL A+ + ++ V+W+ MI+ Y G EAF +FR+M
Sbjct: 223 ELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIM 282
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI----GIEKDVFISNALIDLYSKCG 365
+ + F+ V+S A+ R G +HA+ LK + + ++NALI Y KCG
Sbjct: 283 SKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCG 342
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ + +F+ + E+D+ VSWN ++ GY M+EAK F+ MP++N +SW +ISG
Sbjct: 343 KVDIAQEIFNKMPERDL---VSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISG 399
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
+ + FN M L G P F+ + + + + SL+ G+ LH ++++ G+
Sbjct: 400 LAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESS 459
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+ G AL YA+ G ++++ +F MP + ISW M+ L + G ++I LFEEM K
Sbjct: 460 LSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLK 519
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
I P+ ++ L+V+ ACSH+GLV +G KYF+SM +Y + P+ HY ++D+L R+G+ S
Sbjct: 520 EGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFS 579
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EA++ + SMPFEP + W +LL+GC+ + N + A + L++L +H YVLLSN+YA
Sbjct: 580 EAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYA 639
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
AG+W D VRKLM ++G++K GCSW+EV N+VH F ++P+
Sbjct: 640 VAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPE 686
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 163/411 (39%), Gaps = 80/411 (19%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKE----RYLTTRLLIMYLGS 69
E +F S I C + G+ +H + +KT + + L+ Y
Sbjct: 289 EFTFTSVISVC-------ANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKC 341
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
K A EI + DLV N +++ + ++EA+ F+ MPE+N +SW +ISG
Sbjct: 342 GKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLA 401
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+ G EE++ +F R Q G +P + F+
Sbjct: 402 QIGFAEEALKFFNRMKLQ-------------------------------GFEPCDYAFAG 430
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+C+ + + G + + + G+E +S N+LIT+ + G VD A +F M D
Sbjct: 431 AIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVD 490
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+SW + MIA Q G +A LF +M +
Sbjct: 491 AISW-------------------------------NAMIAALGQHGQGTQAIELFEEMLK 519
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETK 368
P+ F V+SA + ++ G + + G+ D +IDL + G+
Sbjct: 520 EGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFS 579
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ----MEEAKELFDNMPKRN 415
+ + V +S+ + A + W +++ G ++G +E A+ LF+ P+ +
Sbjct: 580 EAKEVMESMPFEPGAPI--WEALLAGCRIHGNIDLGIEAAERLFELKPQHD 628
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/630 (33%), Positives = 356/630 (56%), Gaps = 43/630 (6%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+L+EA+ +F MP +N +SWTA+++ + ++G + ++ FE+ P + S+ A I +
Sbjct: 124 GDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYT 183
Query: 161 QNGFSF--EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL--SVFGLIFKAGFE 216
++ EA KLF ++ E N ++++++ A R G+ + L + E
Sbjct: 184 RSNPMMIGEASKLFAEMRER----NSISYAAMITGLA-----RAGMVDNAEELYLETPVE 234
Query: 217 KHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
VC N+LI+ LK+G ++ A +F+ M +RDV+SW+ ++D + + G +G AR +F+
Sbjct: 235 WRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFER 294
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSCFSIVLSALASLKALRS 334
MPERN V+W+ MI + + G E F LF +M + F K N + +++ A + +
Sbjct: 295 MPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKE 354
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH---------- 384
G+ +H V ++G E DVF+ NA+I +Y + + R +FD + KDV
Sbjct: 355 GIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQ 414
Query: 385 ------------------VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
V+SW +MI G+ G+M ++ ELF MPK++D++W+A+ISG+
Sbjct: 415 NDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGF 474
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+ + +++ F EML PN T SSVL ASA +A+L +G +H ++K+G +D+
Sbjct: 475 VGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDL 534
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ +L Y K G++ ++F + N +S+ M+ G A++G+ +E++ LF +M
Sbjct: 535 SIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNE 594
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
PNE+T L VL AC+H GL+++G YF SM+ +Y I+P HY C+VD+L R+G L +
Sbjct: 595 GQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDD 654
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A D I SMP EP S W +LL + + +A+ A + ++KL ++ A Y +LS +Y+S
Sbjct: 655 AIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSS 714
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEV 696
AGR D+ VR KG++KS G SW+ V
Sbjct: 715 AGRNRDSEQVRMAQGLKGVKKSAGYSWIIV 744
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 229/488 (46%), Gaps = 104/488 (21%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
L+ YL + EA I + + D++ + M++ + G + A+ LF+ MPERN V+W
Sbjct: 244 LISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTW 303
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-V 180
TA+I G MK G E GF LFL++ + G V
Sbjct: 304 TAMIDGHMKMGCYE---------------------VGF----------GLFLRMRKEGFV 332
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K N T + + +AC+E +++ G+ + GL+ + GFE V + N++I + + V AR
Sbjct: 333 KVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 392
Query: 241 VFDRM-------------------------------EKRDVVSWTVILDVFIEMGDLGEA 269
+FD M +++DV+SWT ++ F G +G++
Sbjct: 393 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKS 452
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F MP++++++W+ +I+ + +G EEA F +M R +PN S VLSA A L
Sbjct: 453 IELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGL 512
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G+ +H V+K+G+E D+ I N+L+ +Y+KCG DG +F SI + ++VS+N
Sbjct: 513 ATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSI---NSPNIVSFN 569
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SMI G+ NG EEA ELF HK ML G+ P
Sbjct: 570 SMITGFAQNGFGEEALELF--------------------HK-----------MLNEGQKP 598
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGDIESS 505
N+ TF VL A V LE+G + + L Y + G + D ++G ++ +
Sbjct: 599 NEITFLGVLSACTHVGLLEQGWNYFKSMKSL---YQIEPGPHHYACIVDLLGRAGFLDDA 655
Query: 506 RRVFDRMP 513
+ MP
Sbjct: 656 IDLIRSMP 663
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 216/392 (55%), Gaps = 27/392 (6%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
C+S IT + G++ A S+F RM ++ +SWT +L + E G + +AR++F++MP+R
Sbjct: 113 CHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTT 172
Query: 282 VSWSVMIARYNQSG--YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
S++ MI Y +S EA +LF +M + N+ ++ +++ LA R+GM +
Sbjct: 173 ASYNAMITAYTRSNPMMIGEASKLFAEMR----ERNSISYAAMITGLA-----RAGMVDN 223
Query: 340 AH--VLKIGIE-KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
A L+ +E +D SNALI Y K G ++ +F+ + E+D V+SW+SM+ GY
Sbjct: 224 AEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERD---VISWSSMVDGYC 280
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFS 455
G++ A+ELF+ MP+RN V+W+A+I G+++ +++ F +F M G + N +T +
Sbjct: 281 KKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLT 340
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+ A + ++G +HG + ++GF +DVFLG A+ Y + + +R++FD M K
Sbjct: 341 VMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRK 400
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ +SW ++ G ++ +E LFE+ ++ + ++ +++ S+ G + K ++ F
Sbjct: 401 DVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDV----ISWTTMITGFSNKGKMGKSIELF 456
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
M K + +T V+ +G EA
Sbjct: 457 RMMP-----KQDDIAWTAVISGFVGNGEYEEA 483
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 174/368 (47%), Gaps = 34/368 (9%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +HG + + G + +L ++IMY +EA +I +N D+V N +I +
Sbjct: 354 EGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYV 413
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
Q +EE LF+ +++ +SWT +I+GF G++ +S+ F P Q+ I+WTA I G
Sbjct: 414 QNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISG 473
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
FV NG EA+ F+++L V+PN +T SS+ A A + GL + L+ K G E
Sbjct: 474 FVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFD 533
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+S+ NSL+++ K G V + +IF +
Sbjct: 534 LSIQNSLVSMYTKCGNV-------------------------------ADGHQIFTSINS 562
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N VS++ MI + Q+G+ EEA LF +M KPN F VLSA + L G +
Sbjct: 563 PNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNY 622
Query: 339 HAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+ + IE ++DL + G D + S+ + H W +++G +
Sbjct: 623 FKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCE--PHSGVWGALLGASRI 680
Query: 398 NGQMEEAK 405
+ +++ AK
Sbjct: 681 HLRLDVAK 688
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 341/623 (54%), Gaps = 36/623 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ A G L A+R+FD MP RN V+ +L+S + G V + F P ++ +
Sbjct: 50 NTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAV 109
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLL--ESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
S+ A + GF + G A ++ LL E+GV+P+ +T S + + + D LG V
Sbjct: 110 SYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHC 169
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I + GF + + L+ + K+G + AR VFD ME ++VV ++ + + E
Sbjct: 170 QILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAE 229
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +F+ + ER+ ++W+ M+ Q+G EA +FR+M + F +L+A +
Sbjct: 230 ARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGA 289
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L AL G +HA++ + E +VF+ +AL+D+YSKC + RL
Sbjct: 290 LAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKC---RSVRL---------------- 330
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
A+ +F M +N +SW+A+I GY ++ + VF+EM G
Sbjct: 331 ---------------AEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIK 375
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ T SV+ + A++ASLE+G H + G V + AL Y K G IE + R+
Sbjct: 376 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRL 435
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M +++SWT +V G A+ G AKE+I+LFE+M + P+ +T + VL ACS SGLV
Sbjct: 436 FDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLV 495
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
DKG YF+SM+ ++I P HYTC++D+ SRSG L +AE+FI MP PD+ WA+LLS
Sbjct: 496 DKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLS 555
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ + +I + A +NL KL ++PA YVLL +++AS G W D +R+ M ++ ++K
Sbjct: 556 ACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKE 615
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
GCSW++ +N+VH F +P
Sbjct: 616 PGCSWIKYKNKVHIFSADDQSHP 638
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 206/492 (41%), Gaps = 108/492 (21%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H +++ G + + L+ MY +A + ++ G ++V+ N MI ++
Sbjct: 164 GRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLR 223
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+ EA+ LF+ + ER+ ++WT +++G
Sbjct: 224 CKMVAEARALFEAIEERDSITWTTMVTG-------------------------------L 252
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QNG EAL +F ++ GV ++ TF SI AC + G + I + +E +V
Sbjct: 253 TQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNV 312
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V ++L+ + K V LA +VF RM ++++SWT +
Sbjct: 313 FVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAM----------------------- 349
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
I Y Q+G EEA R+F +M R KP+ V+S+ A+L +L G H
Sbjct: 350 --------IVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFH 401
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
L G+ V +SNAL+ LY KCG +D +FD + D VSW +++ GY
Sbjct: 402 CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHD---QVSWTALVMGY---A 455
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
Q +AKE D +F +ML G P+ TF VL
Sbjct: 456 QFGKAKETID----------------------------LFEKMLSKGVKPDGVTFIGVLS 487
Query: 460 ASASVASLEKGKD-LHG-----KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
A + ++KG+ H I+ L Y T + D Y++SG ++ + +MP
Sbjct: 488 ACSRSGLVDKGRSYFHSMQQDHDIVPLDDHY-----TCMIDLYSRSGWLKQAEEFIKQMP 542
Query: 514 D-KNEISWTVMV 524
+ W ++
Sbjct: 543 RCPDAFGWATLL 554
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 118/296 (39%), Gaps = 80/296 (27%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +H ++ +T ++ + L+ MY R A + + + +++ MI
Sbjct: 295 EGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYG 354
Query: 99 QWGNLEEAQRLF-----DG--------------------MPERNEVSWTALISG------ 127
Q G EEA R+F DG + E + AL+SG
Sbjct: 355 QNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVT 414
Query: 128 --------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+ K G +E++ F+ F + +SWTA + G+ Q G + E + LF K+L G
Sbjct: 415 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKG 474
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
VKP+ VTF + AC+ + G VD R
Sbjct: 475 VKPDGVTFIGVLSACS-----------------------------------RSGLVDKGR 499
Query: 240 SVFDRMEK-RDVVS----WTVILDVFIEMGDLGEARRIFDEMPE-RNEVSWSVMIA 289
S F M++ D+V +T ++D++ G L +A +MP + W+ +++
Sbjct: 500 SYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLS 555
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 473 LHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H I++ L P +L L YA SG + +RRVFD MP +N ++ ++ LA +G
Sbjct: 32 VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91
Query: 532 YAKESINLFEEM-EKTSITPNEL 553
++ LF + ++ +++ N L
Sbjct: 92 LVRDMERLFTSLPQRDAVSYNAL 114
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/644 (34%), Positives = 346/644 (53%), Gaps = 52/644 (8%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERN-PFQNV----------ISWTAAIC-----GFV 160
N++ ++SGF K + F PF N+ + IC G++
Sbjct: 43 NQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYM 102
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA-EINDFRLGLSVFGLIFKAGFEKHV 219
Q +A+ ++ +LES V + T+ + ++C+ + +F G + + K GF+ V
Sbjct: 103 QRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFD-GKCIQDHVLKVGFDSDV 161
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+ N+LI + G + AR VFD D+VSW +L ++ +G++ EA+ ++D MPER
Sbjct: 162 YIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPER 221
Query: 280 NE-------------------------------VSWSVMIARYNQSGYPEEAFRLFRQMT 308
N VSWS +I+ Y Q+ EEA LF++M
Sbjct: 222 NVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMN 281
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+ VLSA + L + +G VH V+K+GIE V + NALI +YS C E
Sbjct: 282 ANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVV 341
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+ +F E +SWNSMI GY G++E+A+ LFD+MP +++VSWSA+ISGY +
Sbjct: 342 TAQKLFS---ESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQ 398
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+F +F EM + G P+++ SV+ A +A+L++GK +H I K G ++ L
Sbjct: 399 QDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIIL 458
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GT L + Y K G +E + VF + +K +W ++ GLA +G +S+ F EM++ +
Sbjct: 459 GTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGV 518
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
TPNE+T ++VL AC H GLVD+G ++FNSM + I PN +HY C+VD+L R+G L EAE
Sbjct: 519 TPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAE 578
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ I SMP PD + W +LL CK Y + + ER + L +L +H VLLSNIYAS G
Sbjct: 579 ELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKG 638
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
W+D + VR +M + G+ K+ GCS +E +VH F +P+
Sbjct: 639 NWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQ 682
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 249/486 (51%), Gaps = 15/486 (3%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ + H++K G + Y+ L+ MY +A ++ + D+V N M+ +
Sbjct: 145 GKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVL 204
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+EEA+ ++D MPERN ++ ++I F K G VEE+ F ++++SW+A I +
Sbjct: 205 VGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCY 264
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QN EAL LF ++ +G+ +EV S+ AC+ + G V GL+ K G E +V
Sbjct: 265 EQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYV 324
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
++ N+LI + EV A+ +F D +SW ++ +++ G++ +AR +FD MP++
Sbjct: 325 NLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDK 384
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+ VSWS MI+ Y Q E LF++M KP+ + V+SA L AL G +H
Sbjct: 385 DNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIH 444
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
A++ K G++ ++ + LI++Y K G +D VF + EK V+ +WN++I G +NG
Sbjct: 445 AYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVS---TWNALILGLAMNG 501
Query: 400 QMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTF 454
++++ + F M + N++++ A++ D FN M+ +I PN +
Sbjct: 502 LVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHY 561
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM-- 512
++ L++ ++L I + DV AL K GD E+ R+ ++
Sbjct: 562 GCMVDLLGRAGMLKEAEEL---IESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVE 618
Query: 513 --PDKN 516
PD +
Sbjct: 619 LHPDHD 624
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 224/477 (46%), Gaps = 71/477 (14%)
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
E H+ C ++ + + ++ L+ D ++ ++ L FI ++ ++ +IF
Sbjct: 29 LETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELP-FI---NINQSYQIFS 84
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+ N + M+ Y Q P +A +++ M + + + I+ + + A
Sbjct: 85 HIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFD 144
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G + HVLK+G + DV+I N LI++Y+ CG D R VFD V +VSWNSM+ G
Sbjct: 145 GKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDG---SSVLDMVSWNSMLAG 201
Query: 395 YGLNGQMEEAKELFDNMPKRND-------------------------------VSWSAII 423
Y L G +EEAK+++D MP+RN VSWSA+I
Sbjct: 202 YVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALI 261
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
S Y +++ ++ +F EM +G + ++ SVL A + + + GK +HG ++K+G
Sbjct: 262 SCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIE 321
Query: 484 YDVFLGTALTDTYA-------------------------------KSGDIESSRRVFDRM 512
V L AL Y+ K G+IE +R +FD M
Sbjct: 322 TYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSM 381
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
PDK+ +SW+ M+ G A+ E++ LF+EM+ P+E ++SV+ AC+H +D+G
Sbjct: 382 PDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQG- 440
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
K+ ++ +K N T +++M + G + +A + + E + W +L+ G
Sbjct: 441 KWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE-EKGVSTWNALILG 496
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 159/356 (44%), Gaps = 43/356 (12%)
Query: 36 LVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
+VI G+ +HG ++K GI L L+ MY + + A ++ + D + N MI+
Sbjct: 304 VVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMIS 363
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
++ G +E+A+ LFD MP+++ VSW+A+ISG+ + R E+
Sbjct: 364 GYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTET------------------ 405
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
L LF ++ G KP+E S+ AC + G + I K G
Sbjct: 406 -------------LVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGL 452
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ ++ + +LI + +K+G V+ A VF +E++ V +W ++ G + ++ + F E
Sbjct: 453 KINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSE 512
Query: 276 MPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLK 330
M E NE+++ ++ G +E R F M + + PN + ++ L
Sbjct: 513 MKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLG--- 569
Query: 331 ALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
R+GM A L + + DV AL+ K G+ + G + +VE H
Sbjct: 570 --RAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDH 623
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 350/618 (56%), Gaps = 19/618 (3%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+++ N I A+++ G + +A+RLF MP R+ ++ A+++G+ +GR+ + F P
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ S+ + + +A LF ++ + VT++ + + A L
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARH 152
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
F L EK N ++ ++ G V+ AR +F+ + DV+SW ++ +++ G
Sbjct: 153 YFDL----APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGK 208
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EAR +FD MP R+ VSW++M++ Y + G EA RLF P F+ +A
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF------DAAPVRDVFT--WTA 260
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ S A + V E++ NA++ Y + + + +F+ + ++VA
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA-- 318
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
SWN+M+ GY G +EEAK +FD MP+++ VSW+A+++ Y + + +F EM
Sbjct: 319 -SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
GE N+S F+ VL A +A+LE G LHG++I+ G+ F+G AL Y K G++E +
Sbjct: 378 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 437
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R F+ M +++ +SW M+ G A G+ KE++ +F+ M TS P+++T++ VL ACSHS
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV+KG+ YF SM + + HYTC++D+L R+GRL+EA D + MPFEPDS W +
Sbjct: 498 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL + ++N ++ A + +++L E+ YVLLSNIYAS+G+W DA +R +M E+G+
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Query: 686 RKSGGCSWVEVRNQVHFF 703
+K G SW+EV+N+VH F
Sbjct: 618 KKVPGFSWIEVQNKVHTF 635
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 146/524 (27%), Positives = 250/524 (47%), Gaps = 86/524 (16%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D + N++I A HG H K+ +L Y+ + + EA +
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 187
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+D++ N +++ +QWG + EA+ LFD MP R+ VSW ++SG+ + G + E+ F
Sbjct: 188 RTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF 247
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++V +WTA + G+ QNG EA +
Sbjct: 248 DAAPVRDVFTWTAVVSGYAQNGMLEEARR------------------------------- 276
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+F A E++ N+++ ++ +D A+ +F+ M R+V SW +L +
Sbjct: 277 --------VFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 328
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L EA+ +FD MP+++ VSW+ M+A Y+Q G EE +LF +M R N S F+
Sbjct: 329 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC 388
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLS A + AL GM +H +++ G F+ NAL+ +Y KCG +D R F+ + E+D
Sbjct: 389 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 448
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAII-----SGYLE---- 428
VVSWN+MI GY +G +EA E+FD M K +D++ ++ SG +E
Sbjct: 449 ---VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505
Query: 429 -----HKQFDLV-----FAVFNEML-LSGEI-------------PNKSTFSSVLCASASV 464
H F + + ++L +G + P+ + + ++L AS
Sbjct: 506 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ E G+ KI +L P + + L++ YA SG +R++
Sbjct: 566 RNPELGRSAAEKIFELE-PENAGMYVLLSNIYASSGKWRDARKM 608
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 72/193 (37%), Gaps = 69/193 (35%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
++F + TC DI + +Q LHG LI+ G ++ LL MY
Sbjct: 384 SAFACVLSTC----ADIAALECGMQ---LHGRLIRAGYGVGCFVGNALLAMYF------- 429
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ GN+E+A+ F+ M ER+ VSW +I+G+ +H
Sbjct: 430 ------------------------KCGNMEDARNAFEEMEERDVVSWNTMIAGYARH--- 462
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
GF EAL++F + + KP+++T + AC
Sbjct: 463 ----------------------------GFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494
Query: 195 AEINDFRLGLSVF 207
+ G+S F
Sbjct: 495 SHSGLVEKGISYF 507
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/651 (33%), Positives = 353/651 (54%), Gaps = 76/651 (11%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G L +A++LF+ MP +N VS +ISG++K G + E+ F+ + ++WT I G+
Sbjct: 61 GELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYS 120
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG---LSVFGLIFKAGFEK 217
Q EA +LF+++ G +P+ VTF ++ C N +G V I K G++
Sbjct: 121 QLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---NGHEMGNQITQVQTQIIKLGYDS 177
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD--LGE------- 268
+ V N+L+ K +DLA +F M + D ++ +L I + D LG+
Sbjct: 178 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVI 237
Query: 269 --------------------------ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
AR++FDEMPE++ VS++V+I+ Y G + AF
Sbjct: 238 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 297
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR++ +F F+ +LS ++ G +HA + + ++ + N+L+D+Y+
Sbjct: 298 LFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYA 357
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC G+ EEA+ +F N+ R+ V W+A+
Sbjct: 358 KC----------------------------------GKFEEAEMIFTNLTHRSAVPWTAM 383
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
IS Y++ ++ +FN+M + I +++TF+S+L ASAS+ASL GK LH IIK GF
Sbjct: 384 ISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGF 443
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+VF G+AL D YAK G I+ + + F MPD+N +SW M+ A++G A+ ++ F+E
Sbjct: 444 MSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKE 503
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M + + P+ ++ L VL ACSHSGLV++GL +FNSM IY + P HY VVDML RSG
Sbjct: 504 MVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSG 563
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EHPAGYVLLS 661
R +EAE + MP +PD W+S+L+ C+ +KN+++A RA L+ + E A YV +S
Sbjct: 564 RFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMS 623
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYA+AG+W + V K M ++G++K SWVE++++ H F +P+
Sbjct: 624 NIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQ 674
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 235/504 (46%), Gaps = 45/504 (8%)
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVF----GLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
+PN + + + A + +L L+V I K GF+ S N + LK GE+
Sbjct: 5 RPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELS 64
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
AR +F++M ++ VS +++ +++ G+LGEAR++FD M ER V+W+++I Y+Q
Sbjct: 65 QARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQ 124
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+EAF LF QM R +P+ F +LS + V ++K+G + + + N
Sbjct: 125 FKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNT 184
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKD--------------------------------VAH 384
L+D Y K +F + E D V +
Sbjct: 185 LVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWN 244
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
V N+++ Y + + +A++LFD MP+++ VS++ IISGY + F +F E+
Sbjct: 245 VFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQF 304
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ + F+++L +++ E G+ +H + I ++ +G +L D YAK G E
Sbjct: 305 TAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEE 364
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ +F + ++ + WT M+ + G+ +E + LF +M + S+ ++ T S+L A +
Sbjct: 365 AEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASAS 424
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN--A 622
+ G K +S N + ++D+ ++ G + +A M PD N +
Sbjct: 425 IASLSLG-KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM---PDRNIVS 480
Query: 623 WASLLSGCKTYKNEQIAERAVKNL 646
W +++S Y AE +K+
Sbjct: 481 WNAMISA---YAQNGEAEATLKSF 501
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 70/289 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H I T E + L+ MY K EA I +L V MI+A +Q
Sbjct: 330 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 389
Query: 100 WGNLEEAQRLFDGMPE---------------------------------------RNEVS 120
G EE +LF+ M + N S
Sbjct: 390 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 449
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+AL+ + K G +++++ F+ P +N++SW A I + QNG + LK F +++ SG+
Sbjct: 450 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 509
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P+ V+F + AC+ GL F NS+ ++ ++D R
Sbjct: 510 QPDSVSFLGVLSACSHSGLVEEGLWHF---------------NSMT----QIYKLDPRRE 550
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMI 288
+ ++D+ G EA ++ EMP + +E+ WS ++
Sbjct: 551 -----------HYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 588
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 63/306 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ LH +IK+G + + LL +Y +A + +++ ++V N MI+A Q
Sbjct: 431 GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ 490
Query: 100 WGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS---- 151
G E + F M + + VS+ ++S G VEE +W+F N +
Sbjct: 491 NGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF--NSMTQIYKLDPR 548
Query: 152 ---WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+ + + ++G EA KL + E + P+E+ +SS+ AC + L
Sbjct: 549 REHYASVVDMLCRSGRFNEAEKL---MAEMPIDPDEIMWSSVLNACRIHKNQELARRA-- 603
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
A +F+ E RD + + +++ G
Sbjct: 604 -----------------------------ADQLFNMEELRDAAPYVNMSNIYAAAGQWEN 634
Query: 269 ARRIFDEMPERN----------EVSWSVMIARYNQSGYPE-EAFR-----LFRQMTRYSF 312
++ M +R E+ + N +P+ E R L + M +
Sbjct: 635 VSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGY 694
Query: 313 KPNTSC 318
KP+TSC
Sbjct: 695 KPDTSC 700
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 350/618 (56%), Gaps = 19/618 (3%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+++ N I A+++ G + +A+RLF MP R+ ++ A+++G+ +GR+ + F P
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ S+ + + +A LF ++ + VT++ + + A L
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARH 152
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
F L EK N ++ ++ G V+ AR +F+ + DV+SW ++ +++ G
Sbjct: 153 YFDL----APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGK 208
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EAR +FD MP R+ VSW++M++ Y + G EA RLF P F+ +A
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF------DAAPVRDVFT--WTA 260
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ S A + V E++ NA++ Y + + + +F+ + ++VA
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA-- 318
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
SWN+M+ GY G +EEAK +FD MP+++ VSW+A+++ Y + + +F EM
Sbjct: 319 -SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
GE N+S F+ VL A +A+LE G LHG++I+ G+ F+G AL Y K G++E +
Sbjct: 378 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 437
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R F+ M +++ +SW M+ G A G+ KE++ +F+ M TS P+++T++ VL ACSHS
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV+KG+ YF SM + + HYTC++D+L R+GRL+EA D + MPFEPDS W +
Sbjct: 498 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL + ++N ++ A + +++L E+ YVLLSNIYAS+G+W DA +R +M E+G+
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Query: 686 RKSGGCSWVEVRNQVHFF 703
+K G SW+EV+N+VH F
Sbjct: 618 KKVPGFSWIEVQNKVHTF 635
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 252/524 (48%), Gaps = 86/524 (16%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D + N++I A HG H K+ +L Y+ + + EA +
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 187
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+D++ N +++ +QWG + EA+ LFD MP R+ VSW ++SG+ + G + E+ F
Sbjct: 188 RTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF 247
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++V +WTA + G+ QNG EA ++F + E N V++
Sbjct: 248 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSW-------------- 289
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
N+++ ++ +D A+ +F+ M R+V SW +L +
Sbjct: 290 ---------------------NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 328
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L EA+ +FD MP+++ VSW+ M+A Y+Q G EE +LF +M R N S F+
Sbjct: 329 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC 388
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLS A + AL GM +H +++ G F+ NAL+ +Y KCG +D R F+ + E+D
Sbjct: 389 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 448
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAII-----SGYLE---- 428
VVSWN+MI GY +G +EA E+FD M K +D++ ++ SG +E
Sbjct: 449 ---VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505
Query: 429 -----HKQFDLV-----FAVFNEML-LSGEI-------------PNKSTFSSVLCASASV 464
H F + + ++L +G + P+ + + ++L AS
Sbjct: 506 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ E G+ KI +L P + + L++ YA SG +R++
Sbjct: 566 RNPELGRSAAEKIFELE-PENAGMYVLLSNIYASSGKWRDARKM 608
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 72/193 (37%), Gaps = 69/193 (35%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
++F + TC DI + +Q LHG LI+ G ++ LL MY
Sbjct: 384 SAFACVLSTC----ADIAALECGMQ---LHGRLIRAGYGVGCFVGNALLAMYF------- 429
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ GN+E+A+ F+ M ER+ VSW +I+G+ +H
Sbjct: 430 ------------------------KCGNMEDARNAFEEMEERDVVSWNTMIAGYARH--- 462
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
GF EAL++F + + KP+++T + AC
Sbjct: 463 ----------------------------GFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494
Query: 195 AEINDFRLGLSVF 207
+ G+S F
Sbjct: 495 SHSGLVEKGISYF 507
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/611 (34%), Positives = 335/611 (54%), Gaps = 45/611 (7%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ-NVISWTAAICGFVQNG 163
AQ L +P + +S ++S + + +S+ F P ++W + I + +G
Sbjct: 28 HAQILRTSLPSPSLLS--TILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHG 85
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+L F+++L SG P+ F S+ K+C + D R G SV G I + G + CN
Sbjct: 86 LFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCN 145
Query: 224 SLITLSLK---MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+L+ + K + EV+ + VFD + DV S + LG R++F+ MP+R+
Sbjct: 146 ALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMPKRD 200
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ +I+ Q+G E+A + R+M +P++ S VL A L G +H
Sbjct: 201 IVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHG 260
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ ++ G + DVFI ++LID+Y+KC D VF Y L
Sbjct: 261 YAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVF--------------------YML--- 297
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
P+ + +SW++II+G +++ FD F +ML++ PN +FSS++ A
Sbjct: 298 -----------PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 346
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
A + +L GK LHG II+ F +VF+ +AL D YAK G+I ++R +FD+M + +SW
Sbjct: 347 CAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSW 406
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T M+ G A G+A ++I+LF+ ME + PN + ++VL ACSH+GLVD+ KYFNSM
Sbjct: 407 TAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQ 466
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
Y I P HY V D+L R GRL EA +FI+ M EP + W++LL+ C+ +KN ++AE
Sbjct: 467 DYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAE 526
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
+ K L+ + ++ YVLLSNIY++AGRW DA +R M +KG++K CSW+E++N+V
Sbjct: 527 KVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKV 586
Query: 701 HFFFQKTDHNP 711
H F +P
Sbjct: 587 HAFVAGDKSHP 597
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 183/403 (45%), Gaps = 51/403 (12%)
Query: 84 GFDLVVHNCMINANIQWGNLEEA---QRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
GFDL N ++N ++ +LEE +++FD + S S ++ R
Sbjct: 138 GFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRK-----V 192
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE P ++++SW I G QNG +AL + ++ + ++P+ T SS+ AE +
Sbjct: 193 FEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNL 252
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + G + G++ V + +SLI + K VD + VF + + D +SW I
Sbjct: 253 LKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI---- 308
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
IA Q+G +E + F+QM KPN FS
Sbjct: 309 ---------------------------IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFS 341
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ A A L L G +H ++++ + +VFI++AL+D+Y+KCG + R +FD +
Sbjct: 342 SIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKM--- 398
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVF 436
++ +VSW +MI GY L+G +A LF M K N V++ A+++ D +
Sbjct: 399 ELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAW 458
Query: 437 AVFNEMLLSGE-IPNKSTFSSVLCASASVASLEKG----KDLH 474
FN M IP +++V V LE+ D+H
Sbjct: 459 KYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 501
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/686 (31%), Positives = 360/686 (52%), Gaps = 48/686 (6%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ ++ +++ G + +L M++ + A +++ D+ + N M++
Sbjct: 209 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 268
Query: 100 WGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFE-----RNPFQNVI 150
G ++A + M + ++V+W A+ISG+ + G+ EE+ YF ++ NV+
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SWTA I G QNG+ FEAL +F K++ GVKPN +T +S AC ++ R G + G
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388
Query: 211 FKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
K + + V NSL+ K V++AR F +++ D+VSW +L + G EA
Sbjct: 389 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEA 448
Query: 270 RRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EM E + ++W+ ++ + Q G + A F++M PNT+ S L+A
Sbjct: 449 IELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAA 508
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++ L+ G +H +VL+ IE + +ALI +YS C DS
Sbjct: 509 CGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGC----------DS--------- 549
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+E A +F + R+ V W++IIS + + + EM LS
Sbjct: 550 ---------------LEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS 594
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
N T S L A + +A+L +GK++H II+ G F+ +L D Y + G I+ S
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKS 654
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
RR+FD MP ++ +SW VM+ G+ +++NLF++ + PN +T ++L ACSHS
Sbjct: 655 RRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHS 714
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GL+++G KYF M+ Y + P Y C+VD+LSR+G+ +E +FI MPFEP++ W S
Sbjct: 715 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 774
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL C+ + N +AE A + L++L + YVL++NIY++AGRW DA +R LM E+G+
Sbjct: 775 LLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGV 834
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNP 711
K GCSW+EV+ ++H F +P
Sbjct: 835 TKPPGCSWIEVKRKLHSFVVGDTSHP 860
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 287/592 (48%), Gaps = 63/592 (10%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
++ C N++ G AQ + +G+ + E + L+ + + G VE++ F++ +
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGV-DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV SWTA + + G E +KLF ++ GV+P+ F + KAC+E+ ++R+G V+
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 213
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV----------------- 250
+ GFE + V S++ + +K G +D+AR F+ +E +DV
Sbjct: 214 DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFK 273
Query: 251 ------------------VSWTVILDVFIEMGDLGEARRIFDEMP-----ERNEVSWSVM 287
V+W I+ + + G EA + F EM + N VSW+ +
Sbjct: 274 KALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTAL 333
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI-G 346
IA Q+GY EA +FR+M KPN+ + +SA +L LR G +H + +K+
Sbjct: 334 IAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 393
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
++ D+ + N+L+D Y+KC + R F I + D +VSWN+M+ GY L G EEA E
Sbjct: 394 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTD---LVSWNAMLAGYALRGSHEEAIE 450
Query: 407 LFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
L M + + ++W+ +++G+ ++ F M G PN +T S L A
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
V +L+ GK++HG +++ +G+AL Y+ +E + VF + ++ + W
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNS 570
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ A+SG + +++L EM +++ N +T++S L ACS + +G + I+
Sbjct: 571 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG-------KEIH 623
Query: 583 NIKPNGRHYTC------VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
TC ++DM R G + ++ + MP + D +W ++S
Sbjct: 624 QFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMIS 674
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 144/315 (45%), Gaps = 37/315 (11%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++ +L L LR G VHA ++ G++ F+ + L+++Y +
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ--------------- 136
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
G +E+A+ +FD M +RN SW+AI+ Y ++ +
Sbjct: 137 -------------------TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKL 177
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F M+ G P+ F V A + + + GKD++ ++ +GF + + ++ D + K
Sbjct: 178 FYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIK 237
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G ++ +RR F+ + K+ W +MV G G K+++ +M+ + + P+++T ++
Sbjct: 238 CGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAI 297
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE- 617
+ + SG ++ KYF M + + KPN +T ++ ++G EA M E
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Query: 618 --PDSNAWASLLSGC 630
P+S AS +S C
Sbjct: 358 VKPNSITIASAVSAC 372
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 349/618 (56%), Gaps = 19/618 (3%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+++ N I A+++ G + +A+RLF MP R+ ++ A+++G+ +GR+ + F P
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ S+ + + +A LF ++ + VT++ + + A L
Sbjct: 97 RPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARH 152
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
F L EK N ++ ++ G V+ AR +F+ + D +SW ++ +++ G
Sbjct: 153 YFDL----APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGK 208
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EAR +FD MP R+ VSW++M++ Y + G EA RLF P F+ +A
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF------DAAPVRDVFT--WTA 260
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ S A + V E++ NA++ Y + + + +F+ + ++VA
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA-- 318
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
SWN+M+ GY G +EEAK +FD MP+++ VSW+A+++ Y + + +F EM
Sbjct: 319 -SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
GE N+S F+ VL A +A+LE G LHG++I+ G+ F+G AL Y K G++E +
Sbjct: 378 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDA 437
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R F+ M +++ +SW M+ G A G+ KE++ +F+ M TS P+++T++ VL ACSHS
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV+KG+ YF SM + + HYTC++D+L R+GRL+EA D + MPFEPDS W +
Sbjct: 498 GLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGA 557
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL + ++N ++ A + +++L E+ YVLLSNIYAS+G+W DA +R +M E+G+
Sbjct: 558 LLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Query: 686 RKSGGCSWVEVRNQVHFF 703
+K G SW+EV+N+VH F
Sbjct: 618 KKVPGFSWIEVQNKVHTF 635
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 251/524 (47%), Gaps = 86/524 (16%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D + N++I A HG H K+ +L Y+ + + EA +
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 187
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+D + N +++ +QWG + EA+ LFD MP R+ VSW ++SG+ + G + E+ F
Sbjct: 188 RTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF 247
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++V +WTA + G+ QNG EA ++F + E N V++
Sbjct: 248 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSW-------------- 289
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
N+++ ++ +D A+ +F+ M R+V SW +L +
Sbjct: 290 ---------------------NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 328
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L EA+ +FD MP+++ VSW+ M+A Y+Q G EE +LF +M R N S F+
Sbjct: 329 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC 388
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLS A + AL GM +H +++ G F+ NAL+ +Y KCG +D R F+ + E+D
Sbjct: 389 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 448
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAII-----SGYLE---- 428
VVSWN+MI GY +G +EA E+FD M K +D++ ++ SG +E
Sbjct: 449 ---VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505
Query: 429 -----HKQFDLV-----FAVFNEML-LSGEI-------------PNKSTFSSVLCASASV 464
H F + + ++L +G + P+ + + ++L AS
Sbjct: 506 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ E G+ KI +L P + + L++ YA SG +R++
Sbjct: 566 RNPELGRSAAEKIFELE-PENAGMYVLLSNIYASSGKWRDARKM 608
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 72/193 (37%), Gaps = 69/193 (35%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
++F + TC DI + +Q LHG LI+ G ++ LL MY
Sbjct: 384 SAFACVLSTC----ADIAALECGMQ---LHGRLIRAGYGVGCFVGNALLAMYF------- 429
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ GN+E+A+ F+ M ER+ VSW +I+G+ +H
Sbjct: 430 ------------------------KCGNMEDARNAFEEMEERDVVSWNTMIAGYARH--- 462
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
GF EAL++F + + KP+++T + AC
Sbjct: 463 ----------------------------GFGKEALEIFDMMRTTSTKPDDITLVGVLAAC 494
Query: 195 AEINDFRLGLSVF 207
+ G+S F
Sbjct: 495 SHSGLVEKGISYF 507
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/702 (31%), Positives = 362/702 (51%), Gaps = 83/702 (11%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
S P+ +Y + L L D+ S + GR +H + + + L ++L+ MY+
Sbjct: 94 SPKPDLELRTYC-SVLQLCADLKS---IQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTC 149
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
E I + + + N ++N + GN E+ LF M E +
Sbjct: 150 GDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRE-------------L 196
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
RVE + F+ ++VISW + I G+V NG S + L LF ++L G+ + T S
Sbjct: 197 GIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVS 256
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ C+ LG ++ G KA F K +++ N L
Sbjct: 257 VVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCL------------------------ 292
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
LD++ + G+L A ++F+ M ER+ VSW+ MIA Y + G + + RLF +M +
Sbjct: 293 -------LDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEK 345
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
P+ + +L A A L +G VH ++ + ++ D+F+SNAL+D+Y+KCG
Sbjct: 346 EGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG---- 401
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
M +A +F M ++ VSW+ +I GY ++
Sbjct: 402 ------------------------------SMGDAHSVFSEMQVKDIVSWNTMIGGYSKN 431
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+ +F EM + + PN T + +L A AS+A+LE+G+++HG I++ GF D +
Sbjct: 432 SLPNEALNLFVEMQYNSK-PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 490
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
AL D Y K G + +R +FD +P+K+ +SWTVM+ G GY E+I F EM + I
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+E++ +S+L+ACSHSGL+D+G +FN M I+P HY C+VD+L+R+G LS+A
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 610
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
FI MP EPD+ W +LL GC+ Y + ++AE+ +++++L E+ YVLL+NIYA A +
Sbjct: 611 FIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEK 670
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
W + +R+ + +GLRK+ GCSW+E++ +VH F +P
Sbjct: 671 WEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHP 712
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 244/518 (47%), Gaps = 73/518 (14%)
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN-EV-TFSSICKACAEINDFRLGLSV 206
+ + IC F + G L+ ++L+ KP+ E+ T+ S+ + CA++ + G +
Sbjct: 68 ITDYNIEICRFCELG----NLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRI 123
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+I E + + L+ + + G++ R +FD++ V W ++++ + ++G+
Sbjct: 124 HSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNF 183
Query: 267 GE------------------ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
E AR++FDE+ +R+ +SW+ MI+ Y +G E+ LF QM
Sbjct: 184 RESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQML 243
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+ + V++ ++ L G +H + +K K++ ++N L+D+YSK
Sbjct: 244 LLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSK----- 298
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+G + A ++F+ M +R+ VSW+++I+GY
Sbjct: 299 -----------------------------SGNLNSAIQVFETMGERSVVSWTSMIAGYAR 329
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
D+ +F+EM G P+ T +++L A A LE GKD+H I + D+F+
Sbjct: 330 EGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFV 389
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL D YAK G + + VF M K+ +SW M+ G +++ E++NLF EM+ S
Sbjct: 390 SNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS- 448
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG----RHYT-CVVDMLSRSGR 603
PN +T+ +L AC+ +++G + +I NG RH +VDM + G
Sbjct: 449 KPNSITMACILPACASLAALERGQEIHG------HILRNGFSLDRHVANALVDMYLKCGA 502
Query: 604 LSEAEDFINSMPFEPDSNAWASLLS--GCKTYKNEQIA 639
L A + +P E D +W +++ G Y +E IA
Sbjct: 503 LGLARLLFDMIP-EKDLVSWTVMIAGYGMHGYGSEAIA 539
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/624 (32%), Positives = 345/624 (55%), Gaps = 38/624 (6%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM-WYFERNPFQNV 149
N ++ A + G A+R+FD MP N ++ AL+S + H R+ M F +++
Sbjct: 45 NHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLST-LAHARLLSDMEALFASMTQRDI 103
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLE--SGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+S+ A I GF G +A++++L LL+ S V+P+ +T S++ A + + D LG
Sbjct: 104 VSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFH 163
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
I + GF + V + L+ + KM V A+ FD ++ ++VV + ++ + +
Sbjct: 164 CQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVE 223
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
EARR+F+ M +R+ ++W+ M+ + Q+G EA +FR+M + F +L+A
Sbjct: 224 EARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACG 283
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+L AL G +HA++++ + +VF+ +AL+D+YSKC K
Sbjct: 284 ALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIK------------------- 324
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
A+ +F M +N +SW+A+I GY ++ + VF+EM G
Sbjct: 325 ---------------LAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ T SV+ + A++ASLE+G H + G + + + AL Y K G IE + R
Sbjct: 370 DPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+FD M +++SWT +V G A+ G AKE+I+LFE+M + P+ +T + VL ACS +G
Sbjct: 430 LFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGF 489
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
V+KG YF+SM+ + I P HYTC++D+ SRSG+L EAE+FI MP PD+ W +LL
Sbjct: 490 VEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL 549
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
S C+ + +I + A +NL ++ ++PA YVLL +++A+ G+W + +R+ M ++ ++K
Sbjct: 550 SACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKK 609
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNP 711
GCSW++ +N+VH F +P
Sbjct: 610 EPGCSWIKYKNKVHIFSADDQSHP 633
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 209/472 (44%), Gaps = 87/472 (18%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G + V + +++ + + +A+R FD + +N V + +I+G ++ VEE+ FE
Sbjct: 172 GANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEV 231
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
++ I+WT + GF QNG EAL++F ++ G+ ++ TF SI AC ++ G
Sbjct: 232 MTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQG 291
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ I + ++ +V V ++L+ + K + LA +VF RM ++++SWT ++ + +
Sbjct: 292 KQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQN 351
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G EA R+F E M R P+ V+
Sbjct: 352 GCSEEAVRVFSE-------------------------------MQRDGIDPDDYTLGSVI 380
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
S+ A+L +L G H L G+ + +SNAL+ LY KCG +D +FD + D
Sbjct: 381 SSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD-- 438
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSW +++ GY Q AKE D +F +ML
Sbjct: 439 -QVSWTALVSGY---AQFGRAKETID----------------------------LFEKML 466
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDL-------HGKIIKLGFPYDVFLGTALTDTY 496
G P+ TF VL A + +EKG+ HG I+ + Y T + D Y
Sbjct: 467 AKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHG-IVPIDDHY-----TCMIDLY 520
Query: 497 AKSGDIESSRRVFDRMP-DKNEISWTVM-----VRGLAESG-YAKESINLFE 541
++SG ++ + +MP + I W + +RG E G +A E NL E
Sbjct: 521 SRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAE--NLLE 570
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 182/391 (46%), Gaps = 45/391 (11%)
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGR 371
+P +S ++ +LSA A + +G +H +L+ + ++ N L+ Y K G R
Sbjct: 3 RPLSSQYAALLSAAARTEPHVAGA-LHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARAR 61
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD++ + + ++N+++ + + + LF +M +R+ VS++A+I+G+
Sbjct: 62 RVFDAMPHPN---LFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGS 118
Query: 432 FDLVFAVFNEMLL--SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
V+ +L S P++ T S+++ A++++ GK H +I++LGF + F+G
Sbjct: 119 HAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVG 178
Query: 490 TALTDTYAK---SGD----------------------------IESSRRVFDRMPDKNEI 518
+ L D YAK GD +E +RR+F+ M D++ I
Sbjct: 179 SPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSI 238
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
+WT MV G ++G E++ +F M I ++ T S+L AC +++G K ++
Sbjct: 239 TWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQG-KQIHAY 297
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
N + +VDM S+ + AE M + + +W +L+ G Y
Sbjct: 298 IIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK-NIISWTALIVG---YGQNGC 353
Query: 639 AERAVKNLWKLAEE--HPAGYVLLSNIYASA 667
+E AV+ ++ + P Y L S I + A
Sbjct: 354 SEEAVRVFSEMQRDGIDPDDYTLGSVISSCA 384
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 142/352 (40%), Gaps = 57/352 (16%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+ +F S + C L + + QG+ +H ++I+T ++ + L+ MY R
Sbjct: 272 QYTFGSILTACGAL-------SALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIK 324
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF-----DG---------------- 112
A + + + +++ +I Q G EEA R+F DG
Sbjct: 325 LAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCA 384
Query: 113 ----MPERNEVSWTALISGFM--------------KHGRVEESMWYFERNPFQNVISWTA 154
+ E + AL+SG M K G +E++ F+ F + +SWTA
Sbjct: 385 NLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 444
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK-- 212
+ G+ Q G + E + LF K+L GVKP+ VTF + AC+ G S F + K
Sbjct: 445 LVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDH 504
Query: 213 --AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR-DVVSWTVILDVFIEMGDL--G 267
+ H + +I L + G++ A +M D + W +L GD+ G
Sbjct: 505 GIVPIDDHYTC---MIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIG 561
Query: 268 E-ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ A E+ +N S+ ++ + + G E +L R M K C
Sbjct: 562 KWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGC 613
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/686 (31%), Positives = 359/686 (52%), Gaps = 48/686 (6%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ ++ +++ G + +L M++ + A +++ D+ + N M++
Sbjct: 209 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 268
Query: 100 WGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFE-----RNPFQNVI 150
G ++A + M + ++V+W A+ISG+ + G+ EE+ YF ++ NV+
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SWTA I G QNG+ FEAL +F K++ GVKPN +T +S AC ++ R G + G
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388
Query: 211 FKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
K + + V NSL+ K V++AR F +++ D+VSW +L + G EA
Sbjct: 389 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEA 448
Query: 270 RRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EM E + ++W+ ++ + Q G + A F++M PNT+ S L+A
Sbjct: 449 IELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAA 508
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++ L+ G +H +VL+ IE + +ALI +YS C DS
Sbjct: 509 CGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGC----------DS--------- 549
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+E A +F + R+ V W++IIS + + + EM LS
Sbjct: 550 ---------------LEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS 594
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
N T S L A + +A+L +GK++H II+ G F+ +L D Y + G I+ S
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKS 654
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
RR+FD MP ++ +SW VM+ G+ +++NLF+ + PN +T ++L ACSHS
Sbjct: 655 RRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHS 714
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GL+++G KYF M+ Y + P Y C+VD+LSR+G+ +E +FI MPFEP++ W S
Sbjct: 715 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 774
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL C+ + N +AE A + L++L + YVL++NIY++AGRW DA +R LM E+G+
Sbjct: 775 LLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGV 834
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNP 711
K GCSW+EV+ ++H F +P
Sbjct: 835 TKPPGCSWIEVKRKLHSFVVGDTSHP 860
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 287/592 (48%), Gaps = 63/592 (10%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
++ C N++ G AQ + +G+ + E + L+ + + G VE++ F++ +
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGV-DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV SWTA + + G E +KLF ++ GV+P+ F + KAC+E+ ++R+G V+
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 213
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV----------------- 250
+ GFE + V S++ + +K G +D+AR F+ +E +DV
Sbjct: 214 DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFK 273
Query: 251 ------------------VSWTVILDVFIEMGDLGEARRIFDEMP-----ERNEVSWSVM 287
V+W I+ + + G EA + F EM + N VSW+ +
Sbjct: 274 KALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTAL 333
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI-G 346
IA Q+GY EA +FR+M KPN+ + +SA +L LR G +H + +K+
Sbjct: 334 IAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE 393
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
++ D+ + N+L+D Y+KC + R F I + D +VSWN+M+ GY L G EEA E
Sbjct: 394 LDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTD---LVSWNAMLAGYALRGSHEEAIE 450
Query: 407 LFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
L M + + ++W+ +++G+ ++ F M G PN +T S L A
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
V +L+ GK++HG +++ +G+AL Y+ +E + VF + ++ + W
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNS 570
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ A+SG + +++L EM +++ N +T++S L ACS + +G + I+
Sbjct: 571 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG-------KEIH 623
Query: 583 NIKPNGRHYTC------VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
TC ++DM R G + ++ + MP + D +W ++S
Sbjct: 624 QFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMIS 674
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 205/447 (45%), Gaps = 74/447 (16%)
Query: 182 PNEVT--FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
P+E ++SI + C ++ + RLG V + G + + + L+ + + G V+ AR
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+FD+M +R+V SWT I++++ +GD EE
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDY-------------------------------EE 173
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
+LF M +P+ F V A + LK R G V+ ++L IG E + + +++D
Sbjct: 174 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILD 233
Query: 360 LYSKCGETKDGRLVFDSIVEKDV--------------------------------AHVVS 387
++ KCG R F+ I KDV V+
Sbjct: 234 MFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMP-----KRNDVSWSAIISGYLEHKQFDL-VFAVFNE 441
WN++I GY +GQ EEA + F M K N VSW+A+I+G E +D +VF +
Sbjct: 294 WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGS-EQNGYDFEALSVFRK 352
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSG 500
M+L G PN T +S + A +++ L G+++HG IK+ D+ +G +L D YAK
Sbjct: 353 MVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR 412
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+E +RR F + + +SW M+ G A G +E+I L EM+ I P+ +T ++
Sbjct: 413 SVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT 472
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ G L++F M + + PN
Sbjct: 473 GFTQYGDGKAALEFFQRMHSM-GMDPN 498
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/583 (24%), Positives = 243/583 (41%), Gaps = 140/583 (24%)
Query: 32 TSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHN 91
T+ +L+ GR +HG+ IK V++L+ DL+V N
Sbjct: 373 TNLSLLRHGREIHGYCIK-----------------------------VEELDS-DLLVGN 402
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ---- 147
+++ + ++E A+R F + + + VSW A+++G+ G EE++ FQ
Sbjct: 403 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
++I+W + GF Q G AL+ F ++ G+ PN T S AC ++ + +LG +
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIH 522
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + + E V ++LI++ +++A SVF + RDVV W I
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSI----------- 571
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
I+ QSG A L R+M + + NT L A +
Sbjct: 572 --------------------ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACS 611
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L ALR G +H +++ G++ FI N+LID+Y +CG + R +FD + ++D +VS
Sbjct: 612 KLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRD---LVS 668
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN MI YG++G +A LF F M G
Sbjct: 669 WNVMISVYGMHGFGMDAVNLFQ----------------------------XFRTM---GL 697
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN TF+++L A + H +I+ G+ Y + T YA +E
Sbjct: 698 KPNHITFTNLLSACS-----------HSGLIEEGWKYFKMMKT----EYAMDPAVE---- 738
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC---SH 564
+ MV L+ +G E++ E +EK PN S+L AC +
Sbjct: 739 -----------QYACMVDLLSRAGQFNETL---EFIEKMPFEPNAAVWGSLLGACRIHCN 784
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
L + +Y +EP + +Y + ++ S +GR +A
Sbjct: 785 PDLAEYAARYLFELEP-----QSSGNYVLMANIYSAAGRWEDA 822
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 144/315 (45%), Gaps = 37/315 (11%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++ +L L LR G VHA ++ G++ F+ + L+++Y +
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ--------------- 136
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
G +E+A+ +FD M +RN SW+AI+ Y ++ +
Sbjct: 137 -------------------TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKL 177
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F M+ G P+ F V A + + + GKD++ ++ +GF + + ++ D + K
Sbjct: 178 FYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIK 237
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G ++ +RR F+ + K+ W +MV G G K+++ +M+ + + P+++T ++
Sbjct: 238 CGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAI 297
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE- 617
+ + SG ++ KYF M + + KPN +T ++ ++G EA M E
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357
Query: 618 --PDSNAWASLLSGC 630
P+S AS +S C
Sbjct: 358 VKPNSITIASAVSAC 372
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
++S+L + +L G +H +++ G FLG+ L + Y ++G +E +RR+FD+M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++N SWT ++ G +E+I LF M + P+ V ACS G
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
++ M I + N ++DM + GR+ A F + F+ D W ++SG +
Sbjct: 212 VYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSK 269
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNI--YASAGRWIDA 673
+ A + + ++ KL+ P + I YA +G++ +A
Sbjct: 270 GEFKKALKCISDM-KLSGVKPDQVTWNAIISGYAQSGQFEEA 310
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/622 (33%), Positives = 339/622 (54%), Gaps = 35/622 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ A + G L A+R+FD MP+ N + AL+S V + F P ++ +
Sbjct: 52 NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
S+ A I GF G +++L+ LL E V+P +T S++ + ++D LG SV
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ + GF + V + L+ + KMG + AR VF ME + VV + ++ + + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+ +F M +R+ ++W+ M+ Q+G EA +FR+M + F +L+A +L
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
AL G +HA++ + E +VF+ +AL+D+YSKC + RL
Sbjct: 292 AALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKC---RSIRL----------------- 331
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
A+ +F M RN +SW+A+I GY ++ + F+EM + G P
Sbjct: 332 --------------AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ T SV+ + A++ASLE+G H + G + + AL Y K G IE + R+F
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
D M +++SWT +V G A+ G AKE+I+LFE+M + P+ +T + VL ACS +GLV+
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVE 497
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
KG YF+SM+ + I P HYTC++D+ SRSGR EAE+FI MP PD+ WA+LLS
Sbjct: 498 KGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ N +I + A +NL + ++PA YVLL +++A+ G+W + ++R+ M ++ ++K
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 690 GCSWVEVRNQVHFFFQKTDHNP 711
GCSW++ +N+VH F +P
Sbjct: 618 GCSWIKYKNKVHIFSADDQSHP 639
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 216/516 (41%), Gaps = 118/516 (22%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G ++H +++ G ++ + L+ MY +A + +++ +V++N +I ++
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+E+A+ LF M +R+ ++WT +++ G
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVT-------------------------------GL 253
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QNG EAL +F ++ GV ++ TF SI AC + G + I + +E +V
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNV 313
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V ++L+ + K + LA +VF RM R+++SWT
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWT------------------------- 348
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
MI Y Q+ EEA R F +M KP+ V+S+ A+L +L G H
Sbjct: 349 ------AMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
L G+ + + +SNAL+ LY KCG +D +FD + D VSW +++ GY
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD---QVSWTALVTGY---A 456
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
Q +AKE D +F +ML +G P+ TF VL
Sbjct: 457 QFGKAKETID----------------------------LFEKMLANGLKPDGVTFIGVLS 488
Query: 460 ASASVASLEKGKDL-------HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
A + +EKG D HG I+ + Y T + D Y++SG + + +M
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHG-IVPIDDHY-----TCMIDLYSRSGRFKEAEEFIKQM 542
Query: 513 P-DKNEISWTVM-----VRGLAESG-YAKESINLFE 541
P + W + +RG E G +A E NL E
Sbjct: 543 PHSPDAFGWATLLSSCRLRGNMEIGKWAAE--NLLE 576
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 167/362 (46%), Gaps = 44/362 (12%)
Query: 319 FSIVLSALAS---LKALRSGMHVHAHVLKIGIE-KDVFISNALIDLYSKCGETKDGRLVF 374
++ +LS+ A +R VH +LK ++ F+ N L+ Y+K G R VF
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D + + + + + N+++ + + + + LF +MP+R+ VS++A+I+G+
Sbjct: 72 DEMPDPN---LFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPAR 128
Query: 435 VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
++ +L + P + T S+++ +++++ G +H ++++LGF F+G+ L
Sbjct: 129 SVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLV 188
Query: 494 DTYAKSGDIESSRRVFDRMP-------------------------------DKNEISWTV 522
D YAK G I +RRVF M D++ I+WT
Sbjct: 189 DMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTT 248
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
MV GL ++G E++++F M + ++ T S+L AC +++G + + +
Sbjct: 249 MVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTW 308
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ N + +VDM S+ + AE M + +W +++ G Y +E A
Sbjct: 309 -YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVG---YGQNACSEEA 363
Query: 643 VK 644
V+
Sbjct: 364 VR 365
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 44/241 (18%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ V N ++ + G++E+A RLFD M ++VSWTAL++G+ + G+ +E+
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET--------- 464
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ LF K+L +G+KP+ VTF + AC+ G
Sbjct: 465 ----------------------IDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 207 FGLIFK----AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFI 261
F + K + H + +I L + G A +M D W +L
Sbjct: 503 FDSMQKDHGIVPIDDHYTC---MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCR 559
Query: 262 EMGDLG----EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
G++ A + + P+ N S+ ++ + + G E L R M K
Sbjct: 560 LRGNMEIGKWAAENLLETDPQ-NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPG 618
Query: 318 C 318
C
Sbjct: 619 C 619
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/686 (31%), Positives = 349/686 (50%), Gaps = 127/686 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL++ + QGR +H ++K+GI RYL LL MY
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMY-------------------- 141
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G+L +A+R+FDG+ +RN
Sbjct: 142 -----------AKCGSLTDARRVFDGIRDRN----------------------------- 161
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++SWTA I FV + EA K + + +G KP++VTF S+ A ++G V
Sbjct: 162 --IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKV 219
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I KAG E V SL+ + + + GD+
Sbjct: 220 HMEIAKAGLELEPRVGTSLVGM-------------------------------YAKCGDI 248
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A+ IFD++PE+N V+W+++IA Y Q G + A L +M + PN ++ +L
Sbjct: 249 SKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGC 308
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ AL G VH ++++ G +++++ NALI +Y KCG K
Sbjct: 309 TTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLK------------------ 350
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
EA++LF ++P R+ V+W+A+++GY + D +F M G
Sbjct: 351 ----------------EARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG 394
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P+K TF+S L + +S A L++GK +H +++ G+ DV+L +AL YAK G ++ +R
Sbjct: 395 IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDAR 454
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
VF++M ++N ++WT M+ G A+ G +E++ FE+M+K I P+++T SVL AC+H G
Sbjct: 455 LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LV++G K+F SM Y IKP HY+C VD+L R+G L EAE+ I +MPF+P + W +L
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
LS C+ + + + ERA +N+ KL + YV LSNIYA+AGR+ DA VR++M ++ +
Sbjct: 575 LSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNPK 712
K G SW+EV +VH F + +P+
Sbjct: 635 KEPGQSWIEVDGKVHVFHVEDKSHPE 660
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 210/492 (42%), Gaps = 128/492 (26%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL T+ L+ G+ +H + K G+ E + T L+ MY
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMY---------------- 242
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G++ +AQ +FD +PE+N V+WT LI+G+ + G+V+
Sbjct: 243 ---------------AKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVD------- 280
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
AL+L K+ ++ V PN++T++SI + C
Sbjct: 281 ------------------------VALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V I ++G+ + + V N+LIT+ K G + AR +F + RDVV+WT
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWT-------- 368
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
M+ Y Q G+ +EA LFR+M + KP+ F+
Sbjct: 369 -----------------------AMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSA 405
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L++ +S L+ G +H ++ G DV++ +AL+ +Y+KCG D RLVF+ + E++
Sbjct: 406 LTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERN- 464
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VV+W +MI G +G+ EA E F+ M K+
Sbjct: 465 --VVAWTAMITGCAQHGRCREALEYFEQMKKQ---------------------------- 494
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
G P+K TF+SVL A V +E+G K + G V + D ++G
Sbjct: 495 ---GIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGH 551
Query: 502 IESSRRVFDRMP 513
+E + V MP
Sbjct: 552 LEEAENVILTMP 563
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 164/341 (48%), Gaps = 44/341 (12%)
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+ G +EA + M + + F +L A L++L G VHA +LK GI+ + +
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
+ N L+ +Y+KCG D R VFD I +++ +VSW +MI + Q EA
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRN---IVSWTAMIEAFVAGNQNLEA-------- 181
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
+ + M L+G P+K TF S+L A + L+ G+
Sbjct: 182 -----------------------YKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+H +I K G + +GT+L YAK GDI ++ +FD++P+KN ++WT+++ G A+ G
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN-GRH- 590
++ L E+M++ + PN++T S+L C+ ++ G K Y I+ GR
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHR-----YIIQSGYGREI 333
Query: 591 --YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ M + G L EA +P D W ++++G
Sbjct: 334 WVVNALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMVTG 373
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 13/254 (5%)
Query: 409 DNMP------KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
D +P K + ++ S +S + + + N M+L G F +L A
Sbjct: 48 DQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECA 107
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
+ SLE+G+++H I+K G + +L L YAK G + +RRVFD + D+N +SWT
Sbjct: 108 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTA 167
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEPI 581
M+ E+ +E M+ P+++T +S+L A ++ L+ G K + +
Sbjct: 168 MIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAG 227
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
++P R T +V M ++ G +S+A+ + +P E + W L++G Y + +
Sbjct: 228 LELEP--RVGTSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAG---YAQQGQVDV 281
Query: 642 AVKNLWKLAEEHPA 655
A++ L K+ + A
Sbjct: 282 ALELLEKMQQAEVA 295
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/622 (33%), Positives = 339/622 (54%), Gaps = 35/622 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ A + G L A+R+FD MP+ N + AL+S V + F P ++ +
Sbjct: 52 NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
S+ A I GF G +++L+ LL E V+P +T S++ + ++D LG SV
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ + GF + V + L+ + KMG + AR VF ME + VV + ++ + + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+ +F M +R+ ++W+ M+ Q+G EA +FR+M + F +L+A +L
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
AL G +HA++ + E +VF+ +AL+D+YSKC + RL
Sbjct: 292 AALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKC---RSIRL----------------- 331
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
A+ +F M RN +SW+A+I GY ++ + F+EM + G P
Sbjct: 332 --------------AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ T SV+ + A++ASLE+G H + G + + AL Y K G IE + R+F
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
D M +++SWT +V G A+ G AKE+I+LFE+M + P+ +T + VL ACS +GLV+
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVE 497
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
KG YF+SM+ + I P HYTC++D+ SRSGR EAE+FI MP PD+ WA+LLS
Sbjct: 498 KGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ N +I + A +NL + ++PA YVLL +++A+ G+W + ++R+ M ++ ++K
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 690 GCSWVEVRNQVHFFFQKTDHNP 711
GCSW++ +N+VH F +P
Sbjct: 618 GCSWIKYKNKVHIFSADDQSHP 639
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 216/516 (41%), Gaps = 118/516 (22%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G ++H +++ G ++ + L+ MY +A + +++ +V++N +I ++
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+E+A+ LF M +R+ ++WT +++ G
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVT-------------------------------GL 253
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QNG EAL +F ++ GV ++ TF SI AC + G + I + +E +V
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNV 313
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V ++L+ + K + LA +VF RM R+++SWT
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWT------------------------- 348
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
MI Y Q+ EEA R F +M KP+ V+S+ A+L +L G H
Sbjct: 349 ------AMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
L G+ + + +SNAL+ LY KCG +D +FD + D VSW +++ GY
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD---QVSWTALVTGY---A 456
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
Q +AKE D +F +ML +G P+ TF VL
Sbjct: 457 QFGKAKETID----------------------------LFEKMLANGLKPDGVTFIGVLS 488
Query: 460 ASASVASLEKGKDL-------HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
A + +EKG D HG I+ + Y T + D Y++SG + + +M
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHG-IVPIDDHY-----TCMIDLYSRSGRFKEAEEFIKQM 542
Query: 513 P-DKNEISWTVM-----VRGLAESG-YAKESINLFE 541
P + W + +RG E G +A E NL E
Sbjct: 543 PHSPDAFGWATLLSSCRLRGNMEIGKWAAE--NLLE 576
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 177/387 (45%), Gaps = 46/387 (11%)
Query: 319 FSIVLSALAS---LKALRSGMHVHAHVLKIGIE-KDVFISNALIDLYSKCGETKDGRLVF 374
++ +LS+ A +R VH +LK ++ F+ N L+ Y+K G R VF
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D + + + + + N+++ + + + + LF +MP+R+ VS++A+I+G+
Sbjct: 72 DEMPDPN---LFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPAR 128
Query: 435 VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
++ +L + P + T S+++ +++++ G +H ++++LGF F+G+ L
Sbjct: 129 SVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLV 188
Query: 494 DTYAKSGDIESSRRVFDRMP-------------------------------DKNEISWTV 522
D YAK G I +RRVF M D++ I+WT
Sbjct: 189 DMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTT 248
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
MV GL ++G E++++F M + ++ T S+L AC +++G + + +
Sbjct: 249 MVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTW 308
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ N + +VDM S+ + AE M + +W +++ G Y +E A
Sbjct: 309 -YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVG---YGQNACSEEA 363
Query: 643 VKNLWKLAEE--HPAGYVLLSNIYASA 667
V+ ++ + P + L S I + A
Sbjct: 364 VRAFSEMQMDGIKPDDFTLGSVISSCA 390
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 44/241 (18%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ V N ++ + G++E+A RLFD M ++VSWTAL++G+ + G+ +E+
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET--------- 464
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ LF K+L +G+KP+ VTF + AC+ G
Sbjct: 465 ----------------------IDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 207 FGLIFK----AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFI 261
F + K + H + +I L + G A +M D W +L
Sbjct: 503 FDSMQKDHGIVPIDDHYTC---MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCR 559
Query: 262 EMGDLG----EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
G++ A + + P+ N S+ ++ + + G E L R M K
Sbjct: 560 LRGNMEIGKWAAENLLETDPQ-NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPG 618
Query: 318 C 318
C
Sbjct: 619 C 619
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/610 (34%), Positives = 349/610 (57%), Gaps = 5/610 (0%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ N +IN + G L +A+ +FD P + VS+ +ISG++K G+++ + F+ P +
Sbjct: 103 IQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKG 162
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+S+T I GF QN +A++LF ++ GV PNEVT +++ A + + G
Sbjct: 163 CVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHG 222
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L+ K FE+ V V +L+ + + AR++FD M ++++VSW V+L+ + + G +
Sbjct: 223 LVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDS 282
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +F+ +P ++ V+W +I Y + EA ++R M ++PN ++S
Sbjct: 283 ARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGR 342
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
A+ G + + V+K+G + FI + +I LY+ CG + L F +++VA SW
Sbjct: 343 TMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVA---SW 399
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N++I GY N ++ A ELF+ MP+R+ SWS +ISGY +++Q +L +F++M+ SG
Sbjct: 400 NALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIK 459
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN+ T SVL A A+ +L++G+ H + L A+ D YAK G I ++ V
Sbjct: 460 PNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEV 519
Query: 509 FDRMPDKNEI--SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
F + +K W ++ GLA G+A S+ +F ++E+ I N +T + VL AC H G
Sbjct: 520 FYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVG 579
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LV+ G ++F SM+ ++I P+ +HY C+VD+L R+GRL EAE+ I SMP + D W +L
Sbjct: 580 LVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTL 639
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L+ C+T+ N + ERA +NL +L H A VLLSN+YA AG+W DA VR+ M ++
Sbjct: 640 LAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQ 699
Query: 687 KSGGCSWVEV 696
+ G S V +
Sbjct: 700 RLPGYSGVAL 709
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 240/497 (48%), Gaps = 40/497 (8%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E+ S K C++ G + L+ K+G + + NSLI + K G + A+S+FD
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD 125
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ D VS+ V++ +++ G L A +FDEMP + VS++ MI ++Q+ +A L
Sbjct: 126 VCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVEL 185
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F+QM PN + ++SA + + + +H V+K+ E+ V +S L+ +Y
Sbjct: 186 FKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCV 245
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C + R +FD + EK+ +VSWN M+ GY G ++ A+ +F+ +P ++ V+W II
Sbjct: 246 CSSLVEARALFDEMPEKN---IVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTII 302
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
GY+ ++ + ++ M+ +G PN ++ ++ +G+ L ++K+GF
Sbjct: 303 DGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFD 362
Query: 484 YDVFLGTALTDTYAKSGD-------------------------------IESSRRVFDRM 512
F+ + + YA G I+ + +F+ M
Sbjct: 363 CYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEM 422
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
P+++ SW+ M+ G ++ ++ LF +M + I PNE+T++SVL A + SG + +G
Sbjct: 423 PERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGR 482
Query: 573 KYFNSMEPIYN--IKPNGRHYTCVVDMLSRSGRLSEA-EDFINSMPFEPDSNAWASLLSG 629
+ E ++N I + ++DM ++ G ++ A E F + W +++ G
Sbjct: 483 W---AHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICG 539
Query: 630 CKTYKNEQIAERAVKNL 646
+ + ++ + +L
Sbjct: 540 LAVHGHANLSLKIFSDL 556
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 208/480 (43%), Gaps = 66/480 (13%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R LHG +IK + ++T LL MY +EA + ++ ++V N M+N +
Sbjct: 218 RMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKA 277
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G ++ A+ +F+ +P ++ V+W +I G+++ R+
Sbjct: 278 GFVDSARVVFERIPNKDLVTWGTIIDGYVRVERIN------------------------- 312
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
EAL ++ ++ +G +PN+V + C G + + K GF+ +
Sbjct: 313 ------EALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDF 366
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ +++I L G ++ A F K +V SW ++ ++ + A +F+EMPER+
Sbjct: 367 IQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERD 426
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
SWS MI+ Y Q+ P A LF +M KPN VLSA+A+ L+ G H
Sbjct: 427 VFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHE 486
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+V I +S A+ID+Y+KCG + VF I EK + V WN++I G ++G
Sbjct: 487 YVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREK-ASTVSPWNAIICGLAVHGH 545
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ ++F ++ +R H + N TF VL A
Sbjct: 546 ANLSLKIFSDLERR--------------HIKL-----------------NAITFIGVLTA 574
Query: 461 SASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
V +E GK H +K D+ + D ++G +E + + MP K ++
Sbjct: 575 CCHVGLVESGKR-HFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADV 633
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/606 (35%), Positives = 330/606 (54%), Gaps = 42/606 (6%)
Query: 143 RNPFQNVISWTAAICG--FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA-EIND 199
RNP N +W + ++QN +AL + L S KP+ T+ + + CA +++
Sbjct: 65 RNP--NTFTWNTIMRAHLYLQNS-PHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSE 121
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
F G + +GF+ V V N+L+ L G V AR VF+ D+VSW +L
Sbjct: 122 FE-GRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAG 180
Query: 260 FIEMGDLGEARRIFDEMPERNE---------------------------------VSWSV 286
+++ G++ EA R+F+ MPERN VSWS
Sbjct: 181 YVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSA 240
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
M++ Y Q+ EEA LF +M + LSA + + + G VH +K+G
Sbjct: 241 MVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVG 300
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+E V + NALI LYS CGE D R +FD ++ ++SWNSMI GY G +++A+
Sbjct: 301 VEDYVSLKNALIHLYSSCGEIVDARRIFDD--GGELLDLISWNSMISGYLRCGSIQDAEM 358
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
LF +MP+++ VSWSA+ISGY +H+ F A+F EM L G P+++ S + A +A+
Sbjct: 359 LFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLAT 418
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L+ GK +H I + +V L T L D Y K G +E++ VF M +K +W ++ G
Sbjct: 419 LDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILG 478
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
LA +G ++S+N+F +M+KT PNE+T + VL AC H GLV+ G YFNSM + I+
Sbjct: 479 LAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEA 538
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
N +HY C+VD+L R+G L EAE+ I+SMP PD W +LL C+ +++ ++ ER + L
Sbjct: 539 NIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKL 598
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
+L +H +VLLSNIYAS G W + + +R +M + G+ K+ GCS +E VH F
Sbjct: 599 IQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAG 658
Query: 707 TDHNPK 712
+P+
Sbjct: 659 DKTHPQ 664
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 251/491 (51%), Gaps = 39/491 (7%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+GR LH H + +G + Y+ L+ +Y A + ++ DLV N ++ +
Sbjct: 123 EGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYV 182
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE--RNPFQNVISWTAAI 156
Q G +EEA+R+F+GMPERN ++ ++I+ F + G VE++ F R ++++SW+A +
Sbjct: 183 QAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMV 242
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
+ QN EAL LF+++ SGV +EV S AC+ + + +G V GL K G E
Sbjct: 243 SCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVE 302
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDR-MEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+VS+ N+LI L GE+ AR +FD E D++SW ++ ++ G + +A +F
Sbjct: 303 DYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYS 362
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MPE++ VSWS MI+ Y Q EA LF++M + +P+ + +SA L L G
Sbjct: 363 MPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLG 422
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+HA++ + ++ +V +S LID+Y KCG ++ VF ++ EK V+ +WN++I G
Sbjct: 423 KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVS---TWNAVILGL 479
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+NG +E++ +F +M K +G +PN+ TF
Sbjct: 480 AMNGSVEQSLNMFADMKK-------------------------------TGTVPNEITFM 508
Query: 456 SVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
VL A + + G+ +I + ++ + D ++G ++ + + D MP
Sbjct: 509 GVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPM 568
Query: 515 KNEI-SWTVMV 524
++ +W ++
Sbjct: 569 APDVATWGALL 579
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 165/402 (41%), Gaps = 101/402 (25%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG-FDLVVHNCMIN 95
V GR +HG +K G+ L L+ +Y + ++A I D DL+ N MI+
Sbjct: 286 VEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMIS 345
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
++ G++++A+ LF MPE++ VSW+A+ISG+ +H
Sbjct: 346 GYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQH------------------------ 381
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
FS EAL LF ++ GV+P+E S AC + LG + I +
Sbjct: 382 ------ECFS-EALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKL 434
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ +V + +LI + +K G V+ A VF ME++ V +W ++ LG A
Sbjct: 435 QVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVI--------LGLA------ 480
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+G E++ +F M + PN F VL A +
Sbjct: 481 -----------------MNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHM------ 517
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV--EKDVAHVVSWNSMIG 393
G DGR F+S++ K A++ + M+
Sbjct: 518 -----------------------------GLVNDGRHYFNSMIHEHKIEANIKHYGCMVD 548
Query: 394 GYGLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLEHKQFDL 434
G G ++EA+EL D+MP DV +W A++ +H+ ++
Sbjct: 549 LLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEM 590
>gi|357482291|ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 735
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/749 (31%), Positives = 386/749 (51%), Gaps = 84/749 (11%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
SLRS FS+ P + F + E L + + + R + IH T +L
Sbjct: 21 SLRS-FSLKPRSHFPLHYECDESQLLHYLTNGFLHEARTILHSFPSGNIHSRVVHWTSML 79
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
Y +A + + ++V +N M++A +Q G +A+R FD MPERN VSWTA
Sbjct: 80 TNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTA 139
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
++SG+ G ++++ F+ P +NV+SW + + G ++NG EA K
Sbjct: 140 MLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARK------------- 186
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+F +K+V N++I ++ G +D A+ +FD
Sbjct: 187 --------------------------VFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFD 220
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
++E R+V++WT ++ + +GD+ EA R+F MPE+N VSW+ MI + +G+ EA L
Sbjct: 221 QIECRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLL 280
Query: 304 FRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVL----KIGIEKDVFISNALI 358
F M S KPN F ++ A A + G +HA ++ K+ + D + +L+
Sbjct: 281 FLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLD-DYDCRLGRSLV 339
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
+YS CG R VF+ ++ S+NSMI GY GQ+ +A+ELFD +P RN ++
Sbjct: 340 RMYSVCGLMDSARSVFEGDMKN--CDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIA 397
Query: 419 WSAIISGYLEHKQ-------FD--------------LVFA------------VFNEMLLS 445
W+ +ISGYL Q FD +++ +F EM+
Sbjct: 398 WTCMISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQ 457
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK--LGFPYDVFLGTALTDTYAKSGDIE 503
G P ST++ + A SVA L+ G LH +K + YDV+L +L YAK G+IE
Sbjct: 458 GASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIE 517
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ R+F M +++ISW M+ GL++ G A E++N++E M + + P+ +T L VL AC+
Sbjct: 518 DAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACA 577
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+G VDKG + F+ M Y ++P HY ++++L R+GR+ +AE+F+ +P EP+ W
Sbjct: 578 HAGFVDKGCELFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEEFVLRLPVEPNHTIW 637
Query: 624 ASLLSGCKTYKNE-QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
+L+ C K + IA RA L +L + G+V L NIYA+ R ++ ++R+ M
Sbjct: 638 GALIGVCGLSKTDADIARRAATRLLELDPLNAPGHVTLCNIYAANDRHLEETSLRREMRM 697
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
KG+RK+ GCSW+ V+ +VH F +P
Sbjct: 698 KGVRKAPGCSWILVKGKVHAFSSGDRLDP 726
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/721 (31%), Positives = 367/721 (50%), Gaps = 75/721 (10%)
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP---- 114
T LL Y + L+A + + + V N M++ +Q G++ A+RLFD MP
Sbjct: 98 ATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDV 157
Query: 115 ---------------------------ERNEVSWTALISGFMK---HGR---VEESMWYF 141
+RN V+WT +ISG+++ HG+ + M +
Sbjct: 158 TSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHE 217
Query: 142 ERNPFQ-NVISWTAAICGF-------------VQNGFSFE----------------ALKL 171
+P Q N S +A+ G ++ GF + AL +
Sbjct: 218 GASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDI 277
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
+K + V+ NE T+S++ A + ++V+G K + +L+T +
Sbjct: 278 AIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYG----RDPVKSIPSQTALLTGLAR 333
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
G + AR +F+++ VVSW ++ +++ G + EA+ +FD MP RN +SW+ MIA Y
Sbjct: 334 CGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGY 393
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q+G EEA L + + R P+ S + A + + AL +G VH+ +K G + +
Sbjct: 394 AQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNS 453
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
++ NALI +Y KC + R VF+ + KD VSWNS I N +E+A+ +FDNM
Sbjct: 454 YVCNALISMYGKCRNMEYVRQVFNRMRVKDT---VSWNSFIAALVQNNMLEDARHIFDNM 510
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
R+ VSW+ IIS Y + ++ D F ML E PN + +L + S + G+
Sbjct: 511 LSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQ 570
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H IK G ++ + AL Y K G S +VFD M +++ +W + G A+ G
Sbjct: 571 QIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHG 629
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+E+I ++E ME + PNE+T + +L ACSH+GLVD+G ++F SM Y + P HY
Sbjct: 630 LGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHY 689
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
C+VD+L R+G + AE FI MP EPD+ W++LL CK +KN +I RA + L+
Sbjct: 690 ACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEP 749
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ YV+LSNIY+S G W++ +RK+M ++G+ K GCSW+++RN+VH F +
Sbjct: 750 SNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHE 809
Query: 712 K 712
K
Sbjct: 810 K 810
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/585 (22%), Positives = 263/585 (44%), Gaps = 107/585 (18%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
D H+ I + G L EA+ +FD MP R+ ++W ++IS + G +E++ F+
Sbjct: 30 ALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDA 89
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
NV + T + G+ + G +A +
Sbjct: 90 ISGGNVRTATILLSGYARLGRVLDARR--------------------------------- 116
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+F E++ N++++ ++ G++ +AR +FD M RDV SW ++ +
Sbjct: 117 ------VFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHS 170
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
+ +A +F +MP+RN V+W+VMI+ Y + + + +FR M P+ S F+ VL
Sbjct: 171 RQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVL 230
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL-VFDSIVEKD- 381
SA+ L+ L + VLK G E DV I +++++Y++ D + FD +VE++
Sbjct: 231 SAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNE 290
Query: 382 ---------------------------VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
V + S +++ G G++ EA+ LF+ +P
Sbjct: 291 YTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDP 350
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEM----------LLSGEIPNKSTFSSV------- 457
VSW+A+I+GY+++ D +F+ M +++G N + ++
Sbjct: 351 IVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALH 410
Query: 458 --------------LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
A + + +LE G+ +H +K G ++ ++ AL Y K ++E
Sbjct: 411 RNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNME 470
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
R+VF+RM K+ +SW + L ++ +++ ++F+ M ++ + ++ +++ A +
Sbjct: 471 YVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTTIISAYA 526
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+ D+ +++F +M + KPN T +LS G L A+
Sbjct: 527 QAERGDEAVEFFKTMLHEHE-KPNSPILTI---LLSVCGGLGSAK 567
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
A+ G + +R VFD MP ++ I+W M+ SG +++ LF+ + ++ TIL
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNV--RTATIL 101
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
L + G V + F+ M + N + +V ++G ++ A ++MP
Sbjct: 102 --LSGYARLGRVLDARRVFDGMP-----ERNTVAWNAMVSCYVQNGDITMARRLFDAMP- 153
Query: 617 EPDSNAWASLLSG-CKTYKNEQIAERAVKNLWKLAEEHP 654
D +W S+++G C + R + + W L ++ P
Sbjct: 154 SRDVTSWNSMVTGYCHS--------RQMVDAWNLFKQMP 184
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/675 (32%), Positives = 357/675 (52%), Gaps = 69/675 (10%)
Query: 47 LIKTGIHKERYLT-----TRLLIMYLGSRKS----LEANEIVKDLNGFDLVVHNCMINAN 97
+ K G+ ++ YL +LL L SR + L I+ ++ + N +I+
Sbjct: 1 MAKHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY 60
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
+ L++A++LFD MP+RN +W +LIS K G ++E+ F P + SW + +
Sbjct: 61 GKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVS 120
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
GF Q+ E+L+ F+K+ NE +F S ACA + D +G V L+ K+ +
Sbjct: 121 GFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST 180
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
DV + ++D++ + G + A +F M
Sbjct: 181 -------------------------------DVYMGSALIDMYSKCGSVACAEEVFSGMI 209
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
ERN V+W+ +I Y Q+G EA +F +M +P+ + V+SA ASL AL+ G+
Sbjct: 210 ERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQ 269
Query: 338 VHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+HA V+K D+ + NAL+D+Y+KC + + R VFD + + +VVS SM+ GY
Sbjct: 270 IHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRM---SIRNVVSETSMVSGYA 326
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
++ A+ +F M +RN VSW+A+I+GY ++ + + +F + P TF +
Sbjct: 327 RAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGN 386
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+L D+F+G +L D Y K G IE RVF++M +++
Sbjct: 387 LL------------------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERD 422
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW ++ G A++GY E++ +F +M P+ +T++ VL ACSH+GLV++G YF
Sbjct: 423 CVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFF 482
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
SME + + P HYTC+VD+L R+G L+EA++ I +MP PD+ W SLL+ CK + N
Sbjct: 483 SMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNI 541
Query: 637 QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEV 696
++ + A + L ++ + YVLLSN+YA GRW D + VRKLM ++G+ K GCSW+EV
Sbjct: 542 EMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEV 601
Query: 697 RNQVHFFFQKTDHNP 711
++VH F K +P
Sbjct: 602 ESRVHVFLVKDKSHP 616
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/660 (32%), Positives = 364/660 (55%), Gaps = 22/660 (3%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+++ A+ + F L++ N +I+ + N+ A+ LFD +P+ + V+ T ++S +
Sbjct: 16 RAVHAHILTSGFKPFPLII-NRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74
Query: 131 HGRVEESMWYFERNPF--QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
G ++ + F P ++ +S+ A I F + AL+LF+++ G P+ TFS
Sbjct: 75 AGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFS 134
Query: 189 SICKACAEINDFRLGLSVFGL-IFKAGFEKHVSVCNSLITLSLKMGEVDL---------A 238
S+ A + I D +FK G SV N+L++ + L A
Sbjct: 135 SVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAA 194
Query: 239 RSVFDRME--KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
R +FD +RD +WT I+ ++ DL AR + + M + V+W+ MI+ Y G+
Sbjct: 195 RKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGF 254
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD----VF 352
EEAF L R+M + + ++ V+SA ++ G VHA+VL+ ++ +
Sbjct: 255 YEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLS 314
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
++NALI LY++CG+ + R VFD + KD+ VSWN+++ G ++EEA +F MP
Sbjct: 315 VNNALITLYTRCGKLVEARRVFDKMPVKDL---VSWNAILSGCVNARRIEEANSIFREMP 371
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
R+ ++W+ +ISG ++ + +FN+M L G P ++ + + + + SL+ G+
Sbjct: 372 VRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQ 431
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
LH +II+LG + +G AL Y++ G +E++ VF MP + +SW M+ LA+ G+
Sbjct: 432 LHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGH 491
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
++I L+E+M K I P+ +T L++L ACSH+GLV +G YF++M Y I P HY+
Sbjct: 492 GVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYS 551
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
++D+L R+G SEA++ SMPFEP + W +LL+GC + N ++ +A L +L +
Sbjct: 552 RLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQ 611
Query: 653 HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y+ LSN+YA+ G+W + VRKLM E+G++K GCSW+EV N VH F +P+
Sbjct: 612 QDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPE 671
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 222/484 (45%), Gaps = 54/484 (11%)
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A+++ +V I +GF+ + N LI K + AR +FD++ K D+V+ T
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 255 VILDVFIEMGDLGEARRIFDEMPE--RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
+L + G++ A ++F+ P R+ VS++ MI ++ S A +LF QM R F
Sbjct: 67 TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126
Query: 313 KPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETK--- 368
P+ FS VL AL+ + + +H V K G + NAL+ Y C +
Sbjct: 127 VPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVN 186
Query: 369 ------DGRLVFDSIV--EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
R +FD +D +W ++I GY N + A+EL + M V+W+
Sbjct: 187 SCVLMAAARKLFDEAPPGRRDEP---AWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWN 243
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+ISGY+ ++ F + M G ++ T++SV+ A+++ G+ +H +++
Sbjct: 244 AMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRT 303
Query: 481 GF-PYDVF---LGTALTDTYAKSGDIESSRRVFDRMPDKNEIS----------------- 519
P F + AL Y + G + +RRVFD+MP K+ +S
Sbjct: 304 VVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEA 363
Query: 520 --------------WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
WTVM+ GLA++G+ +E + LF +M+ + P + + +CS
Sbjct: 364 NSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVL 423
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G +D G + + + + + + ++ M SR G + A+ +MP+ DS +W +
Sbjct: 424 GSLDNGQQLHSQIIQLGH-DSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWNA 481
Query: 626 LLSG 629
+++
Sbjct: 482 MIAA 485
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 154/354 (43%), Gaps = 54/354 (15%)
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
LA L VHAH+L G + I N LID Y K R +FD I + D +
Sbjct: 6 LAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPD---I 62
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPK--RNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V+ +M+ Y G ++ A +LF+ P R+ VS++A+I+ + +F +M
Sbjct: 63 VAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMK 122
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLG---FP---------------- 483
G +P+ TFSSVL A + +A E + LH ++ K G P
Sbjct: 123 RLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASS 182
Query: 484 -----------------------YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
D T + Y ++ D+ ++R + + M D ++W
Sbjct: 183 PLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAW 242
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ G G+ +E+ +L M I +E T SV+ A S++GL + G + ++
Sbjct: 243 NAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIG-RQVHAYVL 301
Query: 581 IYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
++P+G V + + +R G+L EA + MP + D +W ++LSGC
Sbjct: 302 RTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGC 354
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 177/409 (43%), Gaps = 76/409 (18%)
Query: 40 GRALHGHLIKTGIHKERY----LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
GR +H ++++T + + + L+ +Y K +EA + + DLV N +++
Sbjct: 293 GRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILS 352
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
+ +EEA +F MP R+ ++WT +IS
Sbjct: 353 GCVNARRIEEANSIFREMPVRSLLTWTVMIS----------------------------- 383
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
G QNGF E LKLF ++ G++P + ++ +C+ + G + I + G
Sbjct: 384 --GLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGH 441
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ +SV N+LIT+ + G V+ A +VF M D VSW
Sbjct: 442 DSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSW---------------------- 479
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+ MIA Q G+ +A +L+ +M + P+ F +LSA + ++ G
Sbjct: 480 ---------NAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEG 530
Query: 336 MHVHAHVLKI--GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
H + +++ GI + + LIDL + G + + V +S+ + A + W +++
Sbjct: 531 RH-YFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPI--WEALLA 587
Query: 394 GYGLNGQME----EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
G ++G ME A L + MP++ D ++ ++ + Y Q+D V V
Sbjct: 588 GCWIHGNMELGIQAADRLLELMPQQ-DGTYISLSNMYAALGQWDEVARV 635
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/624 (32%), Positives = 340/624 (54%), Gaps = 38/624 (6%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM-WYFERNPFQNV 149
N ++ A + G A+R+FD P N ++ AL+S + H R+ + M F ++
Sbjct: 45 NHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLST-LAHARLLDDMDSLFASMAQRDT 103
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEINDFRLGLSVF 207
+S+ A I GF G A++L+ LL +G V+P+ +T S++ A + + D LG
Sbjct: 104 VSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFH 163
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
I + GF + V + L+ + KMG + A+ VFD M+ ++VV + ++ + +
Sbjct: 164 CQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVE 223
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
EARR+F+ M +R+ ++W+ M+ + Q+G +A FR+M + F +L+A
Sbjct: 224 EARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACG 283
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+L AL G +HA++++ + +VF+ +AL+D+YSKC K
Sbjct: 284 ALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIK------------------- 324
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
A+ F M +N +SW+A+I GY ++ + VF+EM G
Sbjct: 325 ---------------PAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ T SV+ + A++ASLE+G H + G + + + AL Y K G IE + R
Sbjct: 370 DPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+FD M +++SWT +V G A+ G AKE+I+LFE+M + P+ +T + VL ACS +G
Sbjct: 430 LFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGF 489
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
V+KG YF+SM+ + I P HYTC++D+ SRSGRL EAE+FI MP PD+ W +LL
Sbjct: 490 VEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
S C+ + +I + A +NL ++ ++PA YVLL +++A+ G W +R+ M ++ ++K
Sbjct: 550 SACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKK 609
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNP 711
GCSW++ +N+VH F +P
Sbjct: 610 EPGCSWIKYKNKVHIFSADDQSHP 633
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 207/473 (43%), Gaps = 89/473 (18%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G + V + ++ + G + +A+R+FD M +N V + +I+G ++ VEE+ FE
Sbjct: 172 GVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEV 231
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
++ I+WT + GF QNG +AL F ++ G+ ++ TF SI AC ++ G
Sbjct: 232 MTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQG 291
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ I + ++ +V V ++L+ + K + A + F RM ++++SWT ++ + +
Sbjct: 292 KQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQN 351
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G EA R+F E M R P+ V+
Sbjct: 352 GCSEEAVRVFSE-------------------------------MQRDGIDPDDFTLGSVI 380
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
S+ A+L +L G H L G+ + +SNAL+ LY KCG +D +FD ++ D
Sbjct: 381 SSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHD-- 438
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSW +++ GY Q AKE D +F +ML
Sbjct: 439 -QVSWTALVTGY---AQFGRAKETID----------------------------LFEKML 466
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKG--------KDLHGKIIKLGFPYDVFLGTALTDT 495
P+ TF VL A + +EKG KD HG I+ + Y T + D
Sbjct: 467 AKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKD-HG-IVPIDDHY-----TCMIDL 519
Query: 496 YAKSGDIESSRRVFDRMP-DKNEISWTVM-----VRGLAESG-YAKESINLFE 541
Y++SG ++ + +MP + I W + +RG E G +A E NL E
Sbjct: 520 YSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAE--NLLE 570
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/582 (34%), Positives = 336/582 (57%), Gaps = 56/582 (9%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
+ G +++ + + F++ P ++V+SW A + G+ QNG+ EA ++F ++ N
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNS 92
Query: 185 VTFSSICKACAE---INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
++++ + A + I D R +F++ + + N ++ +K + AR +
Sbjct: 93 ISWNGMLAAYVQNGRIEDARR-------LFESKADWELISWNCMMGGYVKRNRLVDARGI 145
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FDRM +RD VSW ++ + + G+L EA+R+F+E P R+ +W+ M++ Y Q+G +EA
Sbjct: 146 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEAR 205
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
R+F M EK+ NA+I Y
Sbjct: 206 RVFDGMP---------------------------------------EKNSVSWNAIIAGY 226
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+C R +F+++ ++V+ SWN+MI GY NG + +A+ FD MP+R+ +SW+A
Sbjct: 227 VQCKRMDQARELFEAMPCQNVS---SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAA 283
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
II+GY + + +F EM GE N+STF+S L A +A+LE GK +HG+++K G
Sbjct: 284 IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAG 343
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++G AL Y K G+I+ + VF+ + +K +SW M+ G A G+ KE++ LFE
Sbjct: 344 LESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFE 403
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M+KT I P+++T++ VL ACSH+GLVDKG +YF SM Y I N +HYTC++D+L R+
Sbjct: 404 SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRA 463
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL +A++ + +MPFEPD+ W +LL + + N ++ E+A K ++++ ++ YVLLS
Sbjct: 464 GRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLS 523
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
N+YA++GRW D +R M ++G++K G SWVEV+N++H F
Sbjct: 524 NLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTF 565
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 264/548 (48%), Gaps = 90/548 (16%)
Query: 29 KDITSQNLVIQGRALHGHLIKTG-IHKERYLTTR-----LLIMYLGSRKSLEANEIVKDL 82
+D+ S N ++ G A +G++ + I E +L Y+ + + +A + +
Sbjct: 59 RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESK 118
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++L+ NCM+ ++ L +A+ +FD MPER+EVSW +ISG+ ++G + E+ FE
Sbjct: 119 ADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFE 178
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+P ++V +WTA + G+VQNG EA ++F + E N V++
Sbjct: 179 ESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSW--------------- 219
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
N++I ++ +D AR +F+ M ++V SW ++ + +
Sbjct: 220 --------------------NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQ 259
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GD+ +AR FD MP+R+ +SW+ +IA Y QSGY EEA LF +M R + N S F+
Sbjct: 260 NGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTST 319
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LS A + AL G VH V+K G+E ++ NAL+ +Y KCG D +VF+ I EK+
Sbjct: 320 LSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKE- 378
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VVSWN+MI GY +G +EA LF++M K
Sbjct: 379 --VVSWNTMIAGYARHGFGKEALMLFESMKK----------------------------- 407
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+G +P+ T VL A + ++KG + + G + T + D ++G
Sbjct: 408 --TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGR 465
Query: 502 IESSRRVFDRMP-DKNEISWTVM-----VRGLAESGYAKESINLFEEMEKTSITPNELTI 555
++ ++ + MP + + +W + + G E G +++ + EME + +
Sbjct: 466 LDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELG--EKAAKMIFEMEPDN--SGMYVL 521
Query: 556 LSVLFACS 563
LS L+A S
Sbjct: 522 LSNLYAAS 529
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/676 (33%), Positives = 367/676 (54%), Gaps = 15/676 (2%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
L+ + + + + QG+ LH K G I L RLL MY +A+++ ++
Sbjct: 11 FLQSLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHR 70
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+ N MI ++ GN E + RLFD M +N+ SW + SGF K G +E + F P
Sbjct: 71 NCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMP 130
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTF--SSICKACAEINDFRL 202
+N + W + I + +NG EA++LF +L L+ K TF +++ AC ++ + +
Sbjct: 131 NRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQC 190
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + I E + +SLI L K G++D A V + ME+ D S + ++ +
Sbjct: 191 GKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYAN 250
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + +ARR F V W+ +I+ Y + EAF LF M + K + S + +
Sbjct: 251 HGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATI 310
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LSA +SL + G +HA+ K+G+ D +++A ID YSKCG D +F + D
Sbjct: 311 LSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDT 370
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH----KQFDLVFAV 438
+ NSMI Y +G++E+AK++F+ MP ++ +SW+++I G ++ + DL F +
Sbjct: 371 ---ILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDL-FCM 426
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
N++ L N+ +SV+ A AS++SLE G+ + + +G D + T+L D Y K
Sbjct: 427 MNKLDLR---MNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCK 483
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G IE R++FD M +EISW M+ G A +G+ E++ LF EM + P E+T V
Sbjct: 484 CGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGV 543
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L AC H GLV +G ++FN M+ Y+I P HY+C+VD+ +R+G L EA + I MPFE
Sbjct: 544 LSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEA 603
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
D++ W+S+L GC + + + E+ + + +L E+ YV LS+I+A++G W + VRK
Sbjct: 604 DASMWSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGDWESSALVRK 663
Query: 679 LMTEKGLRKSGGCSWV 694
+M E+ ++K G SW
Sbjct: 664 VMQERQVQKYPGYSWA 679
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 317/537 (59%), Gaps = 35/537 (6%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L+ +++L+ +P+ T+S++ + C ++ G+ V +GF V + N ++ +
Sbjct: 74 LREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDM 133
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
+K + A+ +FD M +RD+ SW +++ + + G L EAR++FD+M ER+ SW+ M
Sbjct: 134 YIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMT 193
Query: 289 ARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
+ Y + EEA LFR M R+ +FK N S L+A A++++L G +H H+L+IG+
Sbjct: 194 SGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGL 253
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ D + +AL D+Y KC G + EA+ +
Sbjct: 254 DLDGVVWSALSDMYGKC----------------------------------GSIGEARHI 279
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD R+ VSW+A+I Y + + + FA+F+++L SG PN+ TFS VL A A A+
Sbjct: 280 FDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAE 339
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E GK +HG + ++GF F + L Y K G+I+++RRVF+ MP + +SWT ++ G
Sbjct: 340 ELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGY 399
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++G E++ FE + K+ P+ +T + VL AC+H+GLVDKGL+YF+S++ + +
Sbjct: 400 AQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHT 459
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C++D+LSRSGRL EAED I+ MP EPD WASLL GC+ + N ++A+RA + L+
Sbjct: 460 ADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALF 519
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
++ E+PA Y L+NIYA+AG W VRK+M +G+ K G SW+E++ +VH F
Sbjct: 520 EIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFL 576
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 222/484 (45%), Gaps = 75/484 (15%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V+ N +++ I+ +L A+RLFD M ER+ SW +ISG+ K GR++E+ F++
Sbjct: 124 VVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTE 183
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLS 205
++ SWTA G+V++ EAL+LF + K N+ T SS A A I LG
Sbjct: 184 RDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKE 243
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G I + G + V ++L + K G + AR +FD+ RDVVSWT ++D
Sbjct: 244 IHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMID------- 296
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
RY + G EE F LF + + PN FS VL+A
Sbjct: 297 ------------------------RYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNA 332
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A A G VH ++ +IG + F ++ L+ +Y+KCG K+ R VF+ + D +
Sbjct: 333 CADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPD---L 389
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL- 444
VSW S+I GY NGQ +EA + F E+LL
Sbjct: 390 VSWTSLISGYAQNGQPDEALQFF--------------------------------ELLLK 417
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIE 503
SG P+ TF VL A ++KG + I K G + L D ++SG ++
Sbjct: 418 SGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQ 477
Query: 504 SSRRVFDRMP-DKNEISWTVMVRGLAESG---YAKESINLFEEMEKTSITPNELTILSVL 559
+ + D+MP + ++ W ++ G G AK + E+E + P T L+ +
Sbjct: 478 EAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPEN--PATYTTLANI 535
Query: 560 FACS 563
+A +
Sbjct: 536 YATA 539
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 182/422 (43%), Gaps = 94/422 (22%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V W+AL + K G + E+ F++ ++V+SWTA I + + G E LF LL+S
Sbjct: 258 VVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKS 317
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G+ PNE TFS + ACA+ LG V G + + GF+ ++L+ + K G + A
Sbjct: 318 GIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNA 377
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
R VF+ M + D+VSWT +I+ Y Q+G P+
Sbjct: 378 RRVFNGMPRPDLVSWT-------------------------------SLISGYAQNGQPD 406
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EA + F + + +P+ F VLSA HA ++ G+E
Sbjct: 407 EALQFFELLLKSGTQPDHITFVGVLSAC-----------THAGLVDKGLE---------- 445
Query: 359 DLYSKCGETKDGRLVFDSIVEKD-VAHVVS-WNSMIGGYGLNGQMEEAKELFDNMPKRND 416
FDSI EK + H + +I +G+++EA+++ D MP D
Sbjct: 446 --------------YFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPD 491
Query: 417 -VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS------VASLEK 469
W++++ G H L E L E N +T++++ A+ VA + K
Sbjct: 492 KFLWASLLGGCRIHGNLKLAKRA-AEALFEIEPENPATYTTLANIYATAGLWGGVAEVRK 550
Query: 470 GKDLHGKIIKLGFPY-------DVFLGTALTDT-YAKSGDIES-----SRRVFDR--MPD 514
D G + K G + VFL + DT +AKS +I S+R+ + +PD
Sbjct: 551 VMDARGVVKKPGLSWIEIKREVHVFL---VGDTSHAKSKEIHEFLGKLSKRMKEEGYVPD 607
Query: 515 KN 516
N
Sbjct: 608 TN 609
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/739 (31%), Positives = 373/739 (50%), Gaps = 116/739 (15%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIH----------KERYLTTRLLIMYLGSRKS 72
T L +L + G+A+HG+ +K+G+ + L ++L+ MY+
Sbjct: 307 TVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDM 366
Query: 73 LEANEIVKDLNGFDLV-VHNCMINANIQWGNLEEAQRLFDGM------PERNEVSW---- 121
A + ++ V V N ++ + G EE+ LF M P+ + +S
Sbjct: 367 ASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKC 426
Query: 122 -----------------------------TALISGFMKHGRVEESMWYFERNPFQNVISW 152
ALIS + K + +++ F R P Q+ ISW
Sbjct: 427 ITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISW 486
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
+ I G NG + EA++LF+++ G + + VT S+ ACA+ + G V G K
Sbjct: 487 NSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVK 546
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
G +GE LA + +LD++ D +I
Sbjct: 547 TGL----------------IGETSLANA---------------LLDMYSNCSDWQSTNQI 575
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
F M ++N VSW+ MI Y ++G ++ L ++M +P+ + L A A ++L
Sbjct: 576 FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESL 635
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
+ G VH + ++ G+EK + ++NAL+++Y KC ++ RL+FD + KD V+SWN++I
Sbjct: 636 KQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKD---VISWNTLI 692
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
GGY N N P + F++F++MLL PN
Sbjct: 693 GGYSRN-----------NFPNES--------------------FSLFSDMLLQFR-PNAV 720
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T + +L A+AS++SLE+G+++H ++ GF D + AL D Y K G + +R +FDR+
Sbjct: 721 TMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRL 780
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
KN ISWT+M+ G G+ K +I LFE+M + I P+ + ++L+AC HSGL +G
Sbjct: 781 TKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGR 840
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
++F +M+ Y I+P +HYTC+VD+LSR+G L EA +FI SMP EPDS+ W SLL GC+
Sbjct: 841 RFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRI 900
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
+KN ++AE+ ++KL E+ YVLL+NIYA A RW ++ + +GLR++ G S
Sbjct: 901 HKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYS 960
Query: 693 WVEVRNQVHFFFQKTDHNP 711
W+EVR++VH F ++P
Sbjct: 961 WIEVRSKVHVFIADNRNHP 979
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 195/414 (47%), Gaps = 63/414 (15%)
Query: 259 VFIEMGDLGEARRIFDEMPER--NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+++ GDLGEAR +FD MP + + W+ +++ Y ++G +EA LFRQM P+
Sbjct: 145 AYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDA 204
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
S VL ++SL +L G +H + K+G+ + ++NALI +YS+CG +D VFDS
Sbjct: 205 HAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDS 264
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ +D +SWNSMIGG NG A +LF M WS
Sbjct: 265 MHPRD---AISWNSMIGGCFSNGWHGTAVDLFSKM-------WS---------------- 298
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY----------DV 486
G + T SVL A A + GK +HG +K G + D
Sbjct: 299 --------QGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDA 350
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGYAKESINLFEEMEK 545
LG+ L Y K GD+ S+RRVFD M K + W +++ G A+ G +ES++LF +M +
Sbjct: 351 ALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHE 410
Query: 546 TSITPNELTILSVL-----FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC--VVDML 598
I P+E I +L +C+ GLV G I + + C ++
Sbjct: 411 LGIAPDEHAISCLLKCITCLSCARDGLVAHGY--------IVKLGFGAQCAVCNALISFY 462
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
++S + +A N MP + D+ +W S++SGC + A +W +E
Sbjct: 463 AKSNMIGDAVLVFNRMPRQ-DTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/596 (24%), Positives = 250/596 (41%), Gaps = 116/596 (19%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+LK ++S + +G +HG L K G+ + + L+ +Y + +A + ++
Sbjct: 209 CVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPR 268
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGM-PERNEVSWTALIS-------------GFMKH 131
D + N MI G A LF M + E+S ++S G H
Sbjct: 269 DAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVH 328
Query: 132 GRVEES--MWYFE----------------------------RNPFQ------NVISWTAA 155
G +S +W + R F NV W
Sbjct: 329 GYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLI 388
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
+ G+ + G E+L LF+++ E G+ P+E S + K ++ R GL G I K GF
Sbjct: 389 MGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGF 448
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+VCN+LI+ K + A VF+RM ++D +SW +
Sbjct: 449 GAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSV------------------- 489
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
I+ + +G EA LF +M + ++ VL A A + +G
Sbjct: 490 ------------ISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAG 537
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
VH + +K G+ + ++NAL+D+YS C + + +F S+ +K+ VVSW +M
Sbjct: 538 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKN---VVSWTAM---- 590
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
I+ Y+ FD V + EM+L G P+ +
Sbjct: 591 ---------------------------ITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVT 623
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
S L A A SL++GK +HG I+ G + + AL + Y K ++E +R +FDR+ +K
Sbjct: 624 SALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNK 683
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+ ISW ++ G + + + ES +LF +M PN +T+ +L A + +++G
Sbjct: 684 DVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVTMTCILPAAASISSLERG 738
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 217/526 (41%), Gaps = 118/526 (22%)
Query: 62 LLIMYLGSRKSLEANEIVKDL---------NGFDLVVHNCMINANIQWGNLEEAQRLFDG 112
+++ G +SLEA + L G V+ ++ A ++ G+L EA+ +FDG
Sbjct: 102 MVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDG 161
Query: 113 MPER--NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALK 170
MP + + WT+L+S + K G FQ EA+
Sbjct: 162 MPPQAADVRVWTSLMSAYAKAG------------DFQ-------------------EAVS 190
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL 230
LF ++ GV P+ S + K + + G + GL+ K G + +V N+LI +
Sbjct: 191 LFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYS 250
Query: 231 KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ G RME +A R+FD M R+ +SW+ MI
Sbjct: 251 RCG----------RME---------------------DAARVFDSMHPRDAISWNSMIGG 279
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE-- 348
+G+ A LF +M + ++ VL A A L G VH + +K G+
Sbjct: 280 CFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWG 339
Query: 349 --------KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
D + + L+ +Y KCG+
Sbjct: 340 LDSVQSGIDDAALGSKLVFMYVKCGD---------------------------------- 365
Query: 401 MEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
M A+ +FD M + +V W+ I+ GY + +F+ ++F +M G P++ S +L
Sbjct: 366 MASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLK 425
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
++ G HG I+KLGF + AL YAKS I + VF+RMP ++ IS
Sbjct: 426 CITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTIS 485
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
W ++ G + +G E+I LF M + +T+LSVL AC+ S
Sbjct: 486 WNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQS 531
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDK--NEISWTVMVRGLAESGYAKESINLFEEMEK 545
LG L Y K GD+ +R VFD MP + + WT ++ A++G +E+++LF +M+
Sbjct: 138 LGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQC 197
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV-----DMLSR 600
++P+ + VL S G + +G +E + G C V + SR
Sbjct: 198 CGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKL------GLGQACAVANALIAVYSR 251
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
GR+ +A +SM D+ +W S++ GC + A +W E + +L
Sbjct: 252 CGRMEDAARVFDSM-HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE-ISSVTVL 309
Query: 661 SNIYASAG 668
S + A AG
Sbjct: 310 SVLPACAG 317
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/622 (33%), Positives = 339/622 (54%), Gaps = 35/622 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ A + G L A+R+FD MP+ N + AL+S V + F P ++ +
Sbjct: 52 NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
S+ A I GF G +++L+ LL E V+P +T S++ + ++D LG SV
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ + GF + V + L+ + KMG + AR VF ME + VV + ++ + + +A
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+ +F M +R+ ++W+ M+ Q+G EA +FR+M + F +L+A +L
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
A G +HA++ + E +VF+ +AL+D+YSKC + RL
Sbjct: 292 AASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKC---RSIRL----------------- 331
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
A+ +F M RN +SW+A+I GY ++ + F+EM + G P
Sbjct: 332 --------------AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ T SV+ + A++ASLE+G H + G + + AL Y K G IE + R+F
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLF 437
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
D M +++SWT +V G A+ G AKE+I+LFE+M + P+ +T + VL ACS +GLV+
Sbjct: 438 DEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVE 497
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
KG YF+SM+ ++I P HYTC++D+ SRSGR EAE+FI MP PD+ WA+LLS
Sbjct: 498 KGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSS 557
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ N +I + A +NL + ++PA YVLL +++A+ G+W + ++R+ M ++ ++K
Sbjct: 558 CRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEP 617
Query: 690 GCSWVEVRNQVHFFFQKTDHNP 711
GCSW++ +N+VH F +P
Sbjct: 618 GCSWIKYKNKVHIFSADDQSHP 639
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 215/511 (42%), Gaps = 108/511 (21%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G ++H +++ G ++ + L+ MY +A + +++ +V++N +I ++
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+E+A+ LF M +R+ ++WT +++ G
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVT-------------------------------GL 253
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QNG EAL +F ++ GV ++ TF SI AC + G + I + +E +V
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNV 313
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V ++L+ + K + LA +VF RM R+++SWT
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWT------------------------- 348
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
MI Y Q+ EEA R F +M KP+ V+S+ A+L +L G H
Sbjct: 349 ------AMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
L G+ + + +SNAL+ LY KCG +D +FD + D VSW +++ GY
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHD---QVSWTALVTGY---A 456
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
Q +AKE D +F +ML++G P+ TF VL
Sbjct: 457 QFGKAKETID----------------------------LFEKMLVNGLKPDGVTFIGVLS 488
Query: 460 ASASVASLEKGKDLHGKIIKLG--FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKN 516
A + +EKG D + K P D T + D Y++SG + + +MP +
Sbjct: 489 ACSRAGLVEKGCDYFDSMQKDHDIVPIDDHY-TCMIDLYSRSGRFKEAEEFIKQMPHSPD 547
Query: 517 EISWTVM-----VRGLAESG-YAKESINLFE 541
W + +RG E G +A E NL E
Sbjct: 548 AFGWATLLSSCRLRGNMEIGKWAAE--NLLE 576
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 176/387 (45%), Gaps = 46/387 (11%)
Query: 319 FSIVLSALAS---LKALRSGMHVHAHVLKIGIE-KDVFISNALIDLYSKCGETKDGRLVF 374
++ +LS+ A +R VH +LK ++ F+ N L+ Y+K G R VF
Sbjct: 12 YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D + + + + + N+++ + + + + LF +MP+R+ VS++A+I+G+
Sbjct: 72 DEMPDPN---LFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPAR 128
Query: 435 VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
++ +L + P + T S+++ +++++ G +H ++++LGF F+G+ L
Sbjct: 129 SVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLV 188
Query: 494 DTYAKSGDIESSRRVFDRMP-------------------------------DKNEISWTV 522
D YAK G I +RRVF M D++ I+WT
Sbjct: 189 DMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTT 248
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
MV GL ++G E++++F M + ++ T S+L AC ++G + + +
Sbjct: 249 MVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTW 308
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ N + +VDM S+ + AE M + +W +++ G Y +E A
Sbjct: 309 -YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVG---YGQNACSEEA 363
Query: 643 VKNLWKLAEE--HPAGYVLLSNIYASA 667
V+ ++ + P + L S I + A
Sbjct: 364 VRAFSEMQMDGIKPDDFTLGSVISSCA 390
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/655 (32%), Positives = 356/655 (54%), Gaps = 7/655 (1%)
Query: 37 VIQGRALHGHLIKTGI-HKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
+ +GR LH +K+G+ H + RLL MY EA ++ +++ + N MI
Sbjct: 22 IYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIE 81
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
++ G+ ++ LFD MP ++ SW +ISGF K G +E + F P++N I+W +
Sbjct: 82 GYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSM 141
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVK---PNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
I G+ NG EA+ LF L + ++ + +++ AC + G + I
Sbjct: 142 IHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVV 201
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
E + +SL+ L K G++D A V + M++ D S + ++ + G + +ARRI
Sbjct: 202 DEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRI 261
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
F V W+ MI+ Y + EA LF M R + + S F+ VLSA ++L +
Sbjct: 262 FCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGII 321
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G+ VHAHV K+G D+ I +AL+D+YSKC D +F + D + NSMI
Sbjct: 322 DQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDT---ILLNSMI 378
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
Y G++++A+++FD MP ++ +SW+++I G+ ++ +F EM G +K
Sbjct: 379 TVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKF 438
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+ + V+ A AS++SLE G+ + + +G +D + T+L D Y K G +E R++FDRM
Sbjct: 439 SLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRM 498
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
+E+ W M+ G A +G+ E++N+F++M + P ++T + VL AC H GLV++G
Sbjct: 499 MKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGR 558
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
K+F +M+ Y+I P HY+C+VD+ +R+G L +A + I MP + D++ W+S+L GC
Sbjct: 559 KWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVA 618
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
+ N + ++ K + L E+ YV LS IYA+ W + VRKLM +K + K
Sbjct: 619 HGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPK 673
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 320/645 (49%), Gaps = 80/645 (12%)
Query: 66 YLGSRKSL-EANEIVK-DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
++ +R++L E + ++K N + + C+ + Q G ++ R+F+ + ++N +SW
Sbjct: 723 FMAARRTLLEFDMLIKVGFNTHTFLGNRCL-DLYSQLGTGNDSLRVFEDIIDKNLISWNI 781
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ F++ G +E + F+ P ++V+SW I G+V G +A + F ++ ++G++P+
Sbjct: 782 FLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPS 841
Query: 184 EVTFSS----ICKACAEINDFRLGLSVFGLIFKAGFE-KHVSVCNSLITLSLKMGEVDLA 238
T+S+ + AC G + + + G + +V V NSLI + K G VD A
Sbjct: 842 GFTYSTLLSFVSSACR-------GKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYA 894
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VF ME+ D++SW N + WS +SGY
Sbjct: 895 FGVFITMEELDIISW--------------------------NSLIWSC-----GKSGYQN 923
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A R F M + P+ S V++ ++L+ L G + A +++G + +S+A I
Sbjct: 924 LALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASI 983
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
DL+SKC +D VF+ I + D V N+MI Y +G E A +LF + N
Sbjct: 984 DLFSKCNRLEDSVRVFEEIYQWDS---VLCNAMISSYAWHGFGENALQLFVLTLREN--- 1037
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
P + T S VL A + + +++G +H ++
Sbjct: 1038 ----------------------------LRPTEFTLSIVLSAVSILLPVDQGSQIHSLVV 1069
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
K G DV + ++L + YAK G I+S+ + F ++ ++ ISW M+ GLA +G +++
Sbjct: 1070 KSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALE 1129
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
+F+E+ P+E+T+ VL AC+ GLVD+GL F+SME Y + P HY C+VDM+
Sbjct: 1130 IFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMM 1189
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
SR G+L EA D + MP EP W SLL C+ Y + + ER + + +L + Y+
Sbjct: 1190 SRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYL 1249
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+L+ Y GRW + V + M EKG+RK GCSW+ ++N V F
Sbjct: 1250 VLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWIGIKNHVFVF 1294
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/556 (26%), Positives = 250/556 (44%), Gaps = 90/556 (16%)
Query: 29 KDITSQNLVIQGRA--------------------------LHGHLIK------TGIHKER 56
KD S N+VI G A +HG+ G+ K+
Sbjct: 102 KDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDL 161
Query: 57 YLT--------TRLLIMYLGSRKSLEA--------NEIVKDLNGFDLVVHNCMINANIQW 100
L T +L +G+ +L A IV D FD V+ + ++N +
Sbjct: 162 SLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKC 221
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+++ A + + M E + S +ALISG+ GR+ ++ F V+ W + I G+V
Sbjct: 222 GDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYV 281
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
N + EAL+LF + GV+ + TF+S+ AC+ + G+ V ++K GF +
Sbjct: 282 ANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDII 341
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ ++L+ + K D A +F ++ D + ++ V+ G + +AR+IFD MP ++
Sbjct: 342 IDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKS 401
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
+SW+ MI ++Q+ P EA LF +M + + + + V+SA AS+ +L G + A
Sbjct: 402 LISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFA 461
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
IG+E D IS +L+D Y KCG + GR +FD +++ D V WNSM+ GY NG
Sbjct: 462 RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSD---EVPWNSMLMGYATNGH 518
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
EA +FD M G P TF VL A
Sbjct: 519 GIEALNVFDQMRS-------------------------------VGVQPTDITFVGVLSA 547
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGDIESSRRVFDRMPDKN 516
+E+G+ + Y + G + + D YA++G +E + + ++MP K
Sbjct: 548 CDHCGLVEEGRKW---FYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKA 604
Query: 517 EIS-WTVMVRGLAESG 531
+ S W+ ++RG G
Sbjct: 605 DTSMWSSVLRGCVAHG 620
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 149/637 (23%), Positives = 258/637 (40%), Gaps = 133/637 (20%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
++F S + C ++ ++ QG +H H+ K G + + + L+ MY R+ +
Sbjct: 306 STFASVLSAC-------STLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDD 358
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A ++ DL +D ++ N MI G +++A+++FD MP ++ +SW ++
Sbjct: 359 ACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSM---------- 408
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
I GF QN EAL LF ++ + G++ ++ + + + AC
Sbjct: 409 ---------------------IVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISAC 447
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A I+ LG +F G E + SL+ K G V+ R +FDRM K D V W
Sbjct: 448 ASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWN 507
Query: 255 VILDVFIEMGDLGEARRIFDEMP----ERNEVS--------------------------- 283
+L + G EA +FD+M + +++
Sbjct: 508 SMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLD 567
Query: 284 ---------WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+S M+ Y ++G E+A L QM K +TS +S VL +
Sbjct: 568 YHINPGIEHYSCMVDLYARAGLLEDAMNLIEQM---PLKADTSMWSSVLRGCVAHGNNIL 624
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD-GR------LVFDSIVEKDVAHVVS 387
G V ++ + E S A + L +D GR L++D + KD + ++
Sbjct: 625 GKKVAKRIIDLDPEN----SGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSFDIA 680
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
G G G E KE+ M +R ++ + E + D F LL +
Sbjct: 681 -----GEEGXEGLSSETKEV-TKMKQRQNLVLRLVAEKKRECDERDQKFMAARRTLLEFD 734
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
+ +IK+GF FLG D Y++ G S R
Sbjct: 735 M----------------------------LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLR 766
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP-NELTILSVLFACSHSG 566
VF+ + DKN ISW + ++ G + + ++F+EM K + N + V F G
Sbjct: 767 VFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSF-----G 821
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
L D ++F+ M+ I+P+G Y+ ++ +S + R
Sbjct: 822 LFDDAFRFFSEMQKA-GIRPSGFTYSTLLSFVSSACR 857
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/649 (32%), Positives = 362/649 (55%), Gaps = 46/649 (7%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
LV N I + G ++EA+ +F+ MP +N VSWTAL++ + ++ + ++ F + P
Sbjct: 55 LVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD 114
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
NV S+ A I + + EA +LF S + N V+++++ I F + +
Sbjct: 115 PNVASYNAMITAYHRRNMVDEAFELF----SSMPQRNSVSYATM------ITGF-VHAGM 163
Query: 207 FGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
F + K EK V V N LI K+G V+ A +FD M ++DVVSW+ ++ +G
Sbjct: 164 FDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGK 223
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EAR++FD+MP+RN V+W++MI Y + + ++ F LF M R + N + +++L A
Sbjct: 224 IVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEA 283
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
S G+ +H VL +G + D +++N++I +YS+C FD +V+KD+
Sbjct: 284 CGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDI--- 340
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS------------------------- 420
V+WNS+I GY +G +E+A LF+NMP+++ VSW+
Sbjct: 341 VTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEK 400
Query: 421 ------AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
A+ISG + +++++ F F +ML S PN T S VL A AS+A L +G +H
Sbjct: 401 DAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIH 460
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
+ K+ D+ + +L Y+K G+++ + ++F + N +++ ++ GLA++G K
Sbjct: 461 AIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGK 520
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++ +F +M+ + PN +T L VL AC H GLV++G +YF+ M +Y+I+P HY C+
Sbjct: 521 EALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACM 580
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L R+G EA ++SMPF+P W ++L T+ +AE A +NL++L
Sbjct: 581 VDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSA 640
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YV+LSN+++ +G +R + +GL+KS GCSW+ ++++VH F
Sbjct: 641 TPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDEVHLF 689
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 211/424 (49%), Gaps = 56/424 (13%)
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
K + CNS IT + G + A S+F+RM ++ VSWT +L + E ++ +AR +F+++
Sbjct: 53 KFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKI 112
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
P+ N S++ MI Y++ +EAF LF M + N+ ++ +++ + +GM
Sbjct: 113 PDPNVASYNAMITAYHRRNMVDEAFELFSSMP----QRNSVSYATMITGF-----VHAGM 163
Query: 337 HVHAHVLKIGIEKDVFI-SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
A K+ EK V + SN LI+ YSK G +D +FD + EKD VVSW+SMI G
Sbjct: 164 FDMAE--KLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKD---VVSWSSMISGL 218
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G++ EA++LFD MP RN V+W+ +I GY++ F +F M G N +T +
Sbjct: 219 CRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLT 278
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+L A S +G +HG ++ LGF D +L ++ Y++ I+++ + FD M K
Sbjct: 279 VLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKK 338
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ ++W ++ G +SG ++++ LFE M + +
Sbjct: 339 DIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVS------------------------- 373
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
+T ++ + GR+ E MP E D+ AW +++SG + +
Sbjct: 374 ---------------WTTLICGFASEGRIDEFIGLFQMMP-EKDAIAWTAVISGLVSIEE 417
Query: 636 EQIA 639
+IA
Sbjct: 418 YEIA 421
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 14/321 (4%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR-KSLEANEIVKD 81
T LL+ S + +G +HG ++ G + YL ++ MY SR S++A D
Sbjct: 276 TLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMY--SRCYSIDAAAKQFD 333
Query: 82 LN-GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
L D+V N +I +Q GNLE+A LF+ MP+++ VSWT LI GF GR++E +
Sbjct: 334 LMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGL 393
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P ++ I+WTA I G V A F+K+L+S +KPN T S + A A +
Sbjct: 394 FQMMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAIL 453
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
GL + ++ K E +S+ NSL+++ K G VD A +F ++ +VV++ I+
Sbjct: 454 NQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGL 513
Query: 261 IEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPN 315
+ G EA IF +M + N +++ +++ G EE R F M + Y +P
Sbjct: 514 AQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPE 573
Query: 316 TSCFSIVLSALASLKALRSGM 336
++ ++ L R+GM
Sbjct: 574 PDHYACMVDLLC-----RAGM 589
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 158/367 (43%), Gaps = 66/367 (17%)
Query: 374 FDSIV-EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
FDS +K +V NS I G NG ++EA+ +F+ MP +N VSW+A+++ Y E+ +
Sbjct: 43 FDSATRQKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEI 102
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCA---------------------SASVASLEKG- 470
+ VFN++ PN +++++++ A S S A++ G
Sbjct: 103 NKAREVFNKI----PDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGF 158
Query: 471 ---------KDLH----------------GKIIKLGFPYDVFLGTALTDTYA-------- 497
+ LH K+ ++ +F G A D +
Sbjct: 159 VHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGL 218
Query: 498 -KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
+ G I +R++FD+MPD+N ++WT+M+ G + + K+ LF M + + N T+
Sbjct: 219 CRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLT 278
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
+L AC +G++ + + + ++ M SR + A + M
Sbjct: 279 VLLEACGSFDRYGEGIQ-IHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLM-V 336
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
+ D W SL++G Y E+AV + ++ + L +AS GR + + +
Sbjct: 337 KKDIVTWNSLITG---YVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGL 393
Query: 677 RKLMTEK 683
++M EK
Sbjct: 394 FQMMPEK 400
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/649 (32%), Positives = 362/649 (55%), Gaps = 46/649 (7%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
LV N I + G ++EA+ +F+ MP +N VSWTAL++ + ++ + ++ F + P
Sbjct: 47 LVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD 106
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
NV S+ A I + + EA +LF S + N V+++++ I F + +
Sbjct: 107 PNVASYNAMITAYHRRNMVDEAFELF----SSMPQRNSVSYATM------ITGF-VHAGM 155
Query: 207 FGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
F + K EK V V N LI K+G V+ A +FD M ++DVVSW+ ++ +G
Sbjct: 156 FDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGK 215
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EAR++FD+MP+RN V+W++MI Y + + ++ F LF M R + N + +++L A
Sbjct: 216 IVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEA 275
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
S G+ +H VL +G + D +++N++I +YS+C FD +V+KD+
Sbjct: 276 CGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDI--- 332
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS------------------------- 420
V+WNS+I GY +G +E+A LF+NMP+++ VSW+
Sbjct: 333 VTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEK 392
Query: 421 ------AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
A+ISG + +++++ F F +ML S PN T S VL A AS+A L +G +H
Sbjct: 393 DAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIH 452
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
+ K+ D+ + +L Y+K G+++ + ++F + N +++ ++ GLA++G K
Sbjct: 453 AIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGK 512
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++ +F +M+ + PN +T L VL AC H GLV++G +YF+ M +Y+I+P HY C+
Sbjct: 513 EALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACM 572
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L R+G EA ++SMPF+P W ++L T+ +AE A +NL++L
Sbjct: 573 VDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSA 632
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YV+LSN+++ +G +R + +GL+KS GCSW+ ++++VH F
Sbjct: 633 TPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDEVHLF 681
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 211/424 (49%), Gaps = 56/424 (13%)
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
K + CNS IT + G + A S+F+RM ++ VSWT +L + E ++ +AR +F+++
Sbjct: 45 KFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKI 104
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
P+ N S++ MI Y++ +EAF LF M + N+ ++ +++ + +GM
Sbjct: 105 PDPNVASYNAMITAYHRRNMVDEAFELFSSMPQR----NSVSYATMITGF-----VHAGM 155
Query: 337 HVHAHVLKIGIEKDVFI-SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
A K+ EK V + SN LI+ YSK G +D +FD + EKD VVSW+SMI G
Sbjct: 156 FDMAE--KLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKD---VVSWSSMISGL 210
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G++ EA++LFD MP RN V+W+ +I GY++ F +F M G N +T +
Sbjct: 211 CRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLT 270
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+L A S +G +HG ++ LGF D +L ++ Y++ I+++ + FD M K
Sbjct: 271 VLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKK 330
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ ++W ++ G +SG ++++ LFE M + +
Sbjct: 331 DIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVS------------------------- 365
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
+T ++ + GR+ E MP E D+ AW +++SG + +
Sbjct: 366 ---------------WTTLICGFASEGRIDEFIGLFQMMP-EKDAIAWTAVISGLVSIEE 409
Query: 636 EQIA 639
+IA
Sbjct: 410 YEIA 413
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 14/321 (4%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR-KSLEANEIVKD 81
T LL+ S + +G +HG ++ G + YL ++ MY SR S++A D
Sbjct: 268 TLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMY--SRCYSIDAAAKQFD 325
Query: 82 LN-GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
L D+V N +I +Q GNLE+A LF+ MP+++ VSWT LI GF GR++E +
Sbjct: 326 LMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGL 385
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P ++ I+WTA I G V A F+K+L+S +KPN T S + A A +
Sbjct: 386 FQMMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAIL 445
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
GL + ++ K E +S+ NSL+++ K G VD A +F ++ +VV++ I+
Sbjct: 446 NQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGL 505
Query: 261 IEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPN 315
+ G EA IF +M + N +++ +++ G EE R F M + Y +P
Sbjct: 506 AQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPE 565
Query: 316 TSCFSIVLSALASLKALRSGM 336
++ ++ L R+GM
Sbjct: 566 PDHYACMVDLLC-----RAGM 581
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 158/367 (43%), Gaps = 66/367 (17%)
Query: 374 FDSIV-EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
FDS +K +V NS I G NG ++EA+ +F+ MP +N VSW+A+++ Y E+ +
Sbjct: 35 FDSATRQKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEI 94
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCA---------------------SASVASLEKG- 470
+ VFN++ PN +++++++ A S S A++ G
Sbjct: 95 NKAREVFNKI----PDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGF 150
Query: 471 ---------KDLH----------------GKIIKLGFPYDVFLGTALTDTYA-------- 497
+ LH K+ ++ +F G A D +
Sbjct: 151 VHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGL 210
Query: 498 -KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
+ G I +R++FD+MPD+N ++WT+M+ G + + K+ LF M + + N T+
Sbjct: 211 CRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLT 270
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
+L AC +G++ + + + ++ M SR + A + M
Sbjct: 271 VLLEACGSFDRYGEGIQ-IHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLM-V 328
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
+ D W SL++G Y E+AV + ++ + L +AS GR + + +
Sbjct: 329 KKDIVTWNSLITG---YVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGL 385
Query: 677 RKLMTEK 683
++M EK
Sbjct: 386 FQMMPEK 392
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/674 (32%), Positives = 368/674 (54%), Gaps = 8/674 (1%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSL-EANEIVKDLNG 84
LL+ + + + + QG+ LH +K G I+ L RLL MY ++ +A+ + ++
Sbjct: 11 LLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDEMPE 70
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
+ N MI ++ G+ E + +LFD MP++N+ SW +ISGF K G ++ + F
Sbjct: 71 RNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEM 130
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP---NEVTFSSICKACAEINDFR 201
P +N ++W + I G+ +NGF+ EA+ LF +L + ++ + +S+ ACA++
Sbjct: 131 PRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIE 190
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V I E + +SLI L K G +D A V M++ D S + ++ +
Sbjct: 191 YGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYA 250
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
G + +A RIF V W+ +I+ Y + +AF L +M + ++S ++
Sbjct: 251 NCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITV 310
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+LSA +S + +H +V K+G+ V +++A ID YSKC D +F + D
Sbjct: 311 ILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYD 370
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V NSMI Y G++ +AK +F+ MP ++ +SW++II G ++ VF +
Sbjct: 371 T---VLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGK 427
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M ++ + +SV+ A A ++SLE G+ + + I G D + T+L D Y K G
Sbjct: 428 MNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGF 487
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
IE+ R++FD M +E+SW M+ G A +GY E++ LF EM++ + P ++T VL A
Sbjct: 488 IENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSA 547
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C H GLV++G K+FN M+ Y+I P HY+C+VD+ +R+G L EA + + MPFE D +
Sbjct: 548 CDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCS 607
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W+S+L GC + ++ + ++ + + +L E + YV LS I+A++G W + VRK+MT
Sbjct: 608 MWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGDWESSALVRKIMT 667
Query: 682 EKGLRKSGGCSWVE 695
EK ++K G SW +
Sbjct: 668 EKQVKKHPGFSWAD 681
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/607 (35%), Positives = 328/607 (54%), Gaps = 68/607 (11%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+L+ A+ LFD +P+ + +WT LIS KHGR E++ Y+ N F++
Sbjct: 25 GDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYY--NDFRH------------ 70
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
++ V+P+++ S+ KACA + D V + GF V
Sbjct: 71 ----------------KNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVL 114
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ N+LI + K + AR VF+ M RDV+SWT + ++ G L
Sbjct: 115 LGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLL-------------- 160
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
EA FR+M +PN+ S +L A LK L+SG VH
Sbjct: 161 -----------------REALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHG 203
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
V++ G+ +VF+S+AL+++Y+ C + +LVFDS+ +D VSWN +I Y LN +
Sbjct: 204 FVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRD---TVSWNVLITAYFLNKE 260
Query: 401 MEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
E+ +F M N SW+A+I G +++ + + V + M SG PN+ T +S
Sbjct: 261 CEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITS 320
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL A ++ SL GK +HG I + F D+ TAL YAK GD+E SRRVF M ++
Sbjct: 321 VLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRD 380
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW M+ + G +E++ LF EM + + PN +T VL CSHS LVD+GL F+
Sbjct: 381 TVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFD 440
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
SM ++++P+ H++C+VD+LSR+GRL EA +FI MP EP + AW +LL GC+ YKN
Sbjct: 441 SMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNV 500
Query: 637 QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEV 696
++ A L+++ ++P YVLLSNI SA W +A RKLM ++G+ K+ GCSW++V
Sbjct: 501 ELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQV 560
Query: 697 RNQVHFF 703
RN+VH F
Sbjct: 561 RNRVHTF 567
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 196/411 (47%), Gaps = 65/411 (15%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+V++ G ++ V + ++N ++ +AQ +FD M R+ VSW LI+ + + E+
Sbjct: 205 VVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKG 264
Query: 138 MWYFERNPFQ----NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ F R + N SW A I G +QNG + +AL++ ++ SG KPN++T +S+ A
Sbjct: 265 LSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPA 324
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C + R G + G IF+ F + ++ +L+ + K G+++L+R VF M KRD VSW
Sbjct: 325 CTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSW 384
Query: 254 TVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
++ G+ EA +F EM + N V+++ +++ + S +E +F M+R
Sbjct: 385 NTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSR 444
Query: 310 -YSFKPNT---SCFSIVLSALASLK-------------------ALRSGMHVHAHVLKIG 346
+S +P+ SC VLS L+ AL G V+ +V ++G
Sbjct: 445 DHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNV-ELG 503
Query: 347 ---------IEKD-----VFISNALID--LYSKCGETKDGRLVFDSIVEKDVAHVVSW-- 388
IE D V +SN L+ L+S+ ET+ +L+ D V K+ SW
Sbjct: 504 RIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETR--KLMRDRGVTKNPG--CSWIQ 559
Query: 389 -----NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
++ + G N Q +E D M ++ I+GYL + F L
Sbjct: 560 VRNRVHTFVVGDKSNDQSDEIYRFLDYMGEK------MRIAGYLPNTDFVL 604
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 62/168 (36%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG++ + ++ TT L+ MY +
Sbjct: 334 GKQIHGYIFRHWFFQDLTTTTALVFMY-------------------------------AK 362
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+LE ++R+F M +R+ VSW +I HG E
Sbjct: 363 CGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGE------------------------ 398
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
EAL LF ++++SGV+PN VTF+ + C+ GL +F
Sbjct: 399 -------EALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIF 439
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/595 (35%), Positives = 322/595 (54%), Gaps = 34/595 (5%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N W I ++Q A L+ +L + + + T+ + +AC+ V
Sbjct: 42 NCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVH 101
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+ K GF+ V V N+LI + A VF+ D VSW IL +IE+G++
Sbjct: 102 NHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVE 161
Query: 268 EARRIFDEMPER-------------------------------NEVSWSVMIARYNQSGY 296
EA+ I+ +MPER + V+WS +IA + Q+
Sbjct: 162 EAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEM 221
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EEA R F M + + LSA A+L + G +H+ LKIG E + + NA
Sbjct: 222 YEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNA 281
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LI +YSKCG+ R +FD E + ++SWNSMI GY ++ AK +FD+MP+++
Sbjct: 282 LIYMYSKCGDIMVARKLFD---EAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDV 338
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSWS++ISGY ++ FD A+F EM +SG P+++T SV+ A A +A+LE+GK +H
Sbjct: 339 VSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAY 398
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
I + G +V LGT L D Y K G +E++ VF M +K +W ++ GLA +G + S
Sbjct: 399 IKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESS 458
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+++F M+K +TPNE+T + VL AC H GLVD+G +F SM + I+PN +HY C+VD
Sbjct: 459 LDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVD 518
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L R+G+L EAE+ +N MP PD W +LL CK + + ++ R + L +L +H
Sbjct: 519 LLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGF 578
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+VLLSNIYAS G+W D + +R +MT+ + K GCS +E +H F +P
Sbjct: 579 HVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHP 633
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 251/487 (51%), Gaps = 15/487 (3%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+ + +H H++K G + Y+ L+ + +A + + + D V N ++ I
Sbjct: 96 EAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYI 155
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ GN+EEA+ ++ MPER+ ++ ++I F G V E+ F+ +++++W+A I
Sbjct: 156 EIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIAC 215
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
F QN EA++ F+ + + GV +EV S ACA + +G + L K G E +
Sbjct: 216 FQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESY 275
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+++ N+LI + K G++ +AR +FD D++SW ++ +++ + A+ IFD MPE
Sbjct: 276 INLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPE 335
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
++ VSWS MI+ Y Q+ +E LF++M FKP+ + V+SA A L AL G V
Sbjct: 336 KDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWV 395
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HA++ + G+ +V + LID+Y KCG + VF ++EK ++ +WN++I G +N
Sbjct: 396 HAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS---TWNALILGLAMN 452
Query: 399 GQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKST 453
G +E + ++F NM K N++++ ++ D F M+ +I PN
Sbjct: 453 GLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKH 512
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM- 512
+ ++ L++ ++L + ++ DV AL K GD E RRV ++
Sbjct: 513 YGCMVDLLGRAGKLQEAEEL---LNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI 569
Query: 513 ---PDKN 516
PD +
Sbjct: 570 ELQPDHD 576
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 195/423 (46%), Gaps = 67/423 (15%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
RRIF+ + N W++MI Y Q+ P AF L++ M + + +++ A +
Sbjct: 31 TRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSI 90
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
++ VH HVLK+G + DV++ N LI+ +S C D VF+ E V VSW
Sbjct: 91 RRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFN---ESSVLDSVSW 147
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKR-------------------------------NDV 417
NS++ GY G +EEAK ++ MP+R + V
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMV 207
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+WSA+I+ + +++ ++ F M G + ++ S L A A++ + GK +H
Sbjct: 208 TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLS 267
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRR------------------------------ 507
+K+G + L AL Y+K GDI +R+
Sbjct: 268 LKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAK 327
Query: 508 -VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+FD MP+K+ +SW+ M+ G A++ E++ LF+EM+ + P+E T++SV+ AC+
Sbjct: 328 AIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLA 387
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+++G K+ ++ + N T ++DM + G + A + M E + W +L
Sbjct: 388 ALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNAL 445
Query: 627 LSG 629
+ G
Sbjct: 446 ILG 448
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 155/395 (39%), Gaps = 96/395 (24%)
Query: 36 LVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
+V G+ +H +K G L L+ MY + A ++ + DL+ N MI+
Sbjct: 256 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 315
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
++ ++ A+ +FD MPE++ VSW+++IS
Sbjct: 316 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMIS----------------------------- 346
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
G+ QN E L LF ++ SG KP+E T S+ ACA + G V I + G
Sbjct: 347 --GYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 404
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+V + +LI + +K G V+ A VF M ++ + +W ++ LG A
Sbjct: 405 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALI--------LGLA------ 450
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+G E + +F M + PN F VL A + + G
Sbjct: 451 -----------------MNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG 493
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
H YS ++ D ++ +V H + M+
Sbjct: 494 QH---------------------HFYS---------MIHDHKIQPNVKH---YGCMVDLL 520
Query: 396 GLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLEH 429
G G+++EA+EL + MP DV +W A++ +H
Sbjct: 521 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKH 555
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
++ + +F+ + N W+ +I Y++ F ++ ML + + T+ ++
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A + S + K +H ++KLGF DV++ L + ++ ++ + RVF+ + +S
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVS 146
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W ++ G E G +E+ +++ +M + SI + I VLF GLV + K F+ M
Sbjct: 147 WNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMI--VLFG--MRGLVVEACKLFDEM 201
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/547 (35%), Positives = 316/547 (57%), Gaps = 5/547 (0%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS-VCNSL 225
EA+ L G++ + T +S+ + CA+ R G V + G ++ + + N L
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + K G+ AR VFD+M R++ SW +L + ++G + AR++FD+MPE++ VSW+
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWN 161
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
M+ + Q GY +EA R + + + + N F+ VL+ LK + VH +L
Sbjct: 162 TMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVA 221
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G +V +S++++D Y KCG D R +FD + +DV ++W +M+ GY G M+ A
Sbjct: 222 GFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDV---LAWTTMVSGYAKWGDMKSAN 278
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
ELF MP++N VSW+A+ISGY + +F +M+L P++ TFSS LCA AS+A
Sbjct: 279 ELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIA 338
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMV 524
SL+ GK +H ++++ F + + +AL D Y+K G + R+VFD M +K ++ W ++
Sbjct: 339 SLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTII 398
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA+ G +E+I + ++M ++ P+++T + +L ACSHSGLV +GL +F SM Y I
Sbjct: 399 SALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGI 458
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P+ HY C++D+L R+G E D + MP++PD W +LL C+ + + ++ +A +
Sbjct: 459 VPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAE 518
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L +L + YVLLS+IYA GRW VR+LM E+ ++K SW+E+ N+VH F
Sbjct: 519 RLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFS 578
Query: 705 QKTDHNP 711
+P
Sbjct: 579 VSDSSHP 585
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 242/470 (51%), Gaps = 14/470 (2%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +IN + G EA+++FD M RN SW ++SG+ K G ++ + F++ P ++V+
Sbjct: 99 NHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVV 158
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW + Q G+ EAL+ + + + G++ N +F+ + C ++ + L V G I
Sbjct: 159 SWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQI 218
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
AGF +V + +S++ +K G + AR +FD M RDV++WT ++ + + GD+ A
Sbjct: 219 LVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSAN 278
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+F EMPE+N VSW+ +I+ Y ++G +A LF +M + +P+ FS L A AS+
Sbjct: 279 ELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIA 338
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+L+ G +HA++L+I + + + +ALID+YSKCG GR VFD + K VV WN+
Sbjct: 339 SLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNK--LDVVLWNT 396
Query: 391 MIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS- 445
+I +G EEA ++ D+M K + +++ I++ F M
Sbjct: 397 IISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDY 456
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G +P++ ++ ++ E+ D ++ K+ + D + AL G IE
Sbjct: 457 GIVPSQEHYACLIDLLGRAGCFEEVMD---QLEKMPYKPDDRVWNALLGVCRIHGHIELG 513
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
R+ +R+ + S T V L S YA + +E ++K NE +
Sbjct: 514 RKAAERLIELEPQSSTAYV--LLSSIYA--VLGRWESVQKVRQLMNERQV 559
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 180/350 (51%), Gaps = 18/350 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++V+ + +++A ++ G + +A++LFD M R+ ++WT ++SG+ K G ++ + F P
Sbjct: 226 NVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMP 285
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N +SWTA I G+ +NG +AL+LF K++ V+P++ TFSS ACA I + G
Sbjct: 286 EKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQ 345
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMG 264
+ + + F+ + V ++LI + K G + + R VFD M K DVV W I+ + G
Sbjct: 346 IHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHG 405
Query: 265 DLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCF 319
EA ++ D+M + +++++ V++ + SG ++ F M+ Y P+ +
Sbjct: 406 CGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHY 465
Query: 320 SIVLSALASLKALRSGM--HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ ++ L R+G V + K+ + D + NAL+ + G + GR + +
Sbjct: 466 ACLIDLLG-----RAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERL 520
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSWSAI 422
+E + ++ + Y + G+ E +++ M +R +SW I
Sbjct: 521 IELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEI 570
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/680 (31%), Positives = 348/680 (51%), Gaps = 99/680 (14%)
Query: 82 LNGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ GFD++ + N + + + G+L A+ +FD MP +N S ++S + G + +
Sbjct: 250 VTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQH 309
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC--KACAEI 197
F +P +N +WT + G + +AL LF +L GV P+ VT +++ C
Sbjct: 310 LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP 369
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW---- 253
+ L F + F G + HV VCN+L+ K G + AR VF M +D V++
Sbjct: 370 S-----LHPFAIKF--GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 422
Query: 254 -----------------------------------------TVILDVFI---------EM 263
T +L+VF+ +
Sbjct: 423 MGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKC 482
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
L + RR+FDEMPER+ VS++V+IA Y + RLFR+M + F ++ +L
Sbjct: 483 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 542
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
S SL + G +HA ++ +G+ + + NALID+YSKCG
Sbjct: 543 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG------------------ 584
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
++ AK F N +++ +SW+A+I+GY+++ Q + +F++M
Sbjct: 585 ----------------MLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR 628
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+G P+++TFSS++ AS+S+A + G+ LH +I+ G+ VF G+ L D YAK G ++
Sbjct: 629 RAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLD 688
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ R FD MP++N ISW ++ A G AK +I +FE M P+ +T LSVL ACS
Sbjct: 689 EALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 748
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GL D+ +KYF+ M+ Y+I P HY CV+D L R G S+ + + MPF+ D W
Sbjct: 749 HNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIW 808
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
S+L C+ + N+++A A L+ + YV+LSNIYA AG+W DA V+K+M ++
Sbjct: 809 TSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDR 868
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
G+RK G SWVE++ +++ F
Sbjct: 869 GVRKESGYSWVEIKQKIYSF 888
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/499 (19%), Positives = 209/499 (41%), Gaps = 65/499 (13%)
Query: 42 ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWG 101
+LH IK G+ ++ LL Y A + +++ D V +N M+ + G
Sbjct: 370 SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEG 429
Query: 102 NLEEAQRLFDGMPER-----------------------NEVSWTALISGFMKHGRVEESM 138
+A +LF M N +L+ + K +++
Sbjct: 430 LHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMR 489
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
F+ P ++ +S+ I + N + L+LF ++ + G + ++++ +
Sbjct: 490 RLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLP 549
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
D +G + + G + N+LI + K G +D A+S F ++ +SWT ++
Sbjct: 550 DVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALIT 609
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+++ +G EEA +LF M R +P+ +
Sbjct: 610 GYVQ-------------------------------NGQHEEALQLFSDMRRAGLRPDRAT 638
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
FS ++ A +SL + G +H+++++ G + VF + L+D+Y+KCG + FD +
Sbjct: 639 FSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP 698
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDL 434
E++ +SWN++I Y G+ + A ++F+ M + V++ ++++ + D
Sbjct: 699 ERN---SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADE 755
Query: 435 VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F+ M I P K ++ V+ V + + + ++++ F D + T++
Sbjct: 756 CMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKM---LVEMPFKADPIIWTSIL 812
Query: 494 DTYAKSGDIESSRRVFDRM 512
+ G+ E +R D++
Sbjct: 813 HSCRIHGNQELARVAADKL 831
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 142/375 (37%), Gaps = 101/375 (26%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMY-----LGSRKSLEANEIVKDLNGFDLVVHNCMI 94
G+ +H L+ G+ E L L+ MY L + KS +N K + +I
Sbjct: 554 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSA-----ISWTALI 608
Query: 95 NANIQWGNLEEAQRLFDGM------PER-------------------------------- 116
+Q G EEA +LF M P+R
Sbjct: 609 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 668
Query: 117 -NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+ S + L+ + K G ++E++ F+ P +N ISW A I + G + A+K+F +
Sbjct: 669 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 728
Query: 176 LESGVKPNEVTFSSICKACAE------------------------------INDF-RLGL 204
L G P+ VTF S+ AC+ I+ R+G
Sbjct: 729 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 788
Query: 205 --SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR---MEKRDVVSWTVILDV 259
V ++ + F+ + S++ G +LAR D+ ME D + ++ ++
Sbjct: 789 FSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNI 848
Query: 260 FIEMG---DLGEARRIFDEMPERNEVSWS-VMIARY------NQSGYP------EEAFRL 303
+ G D ++I + R E +S V I + N P +E RL
Sbjct: 849 YARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRL 908
Query: 304 FRQMTRYSFKPNTSC 318
+++M + +KP+ +C
Sbjct: 909 YKEMDKQGYKPDITC 923
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/725 (30%), Positives = 367/725 (50%), Gaps = 75/725 (10%)
Query: 42 ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWG 101
A+ G ++TG T LL Y + + +A + + + V N M+ +Q G
Sbjct: 89 AISGGNLRTG--------TILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNG 140
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQ 161
++ A++LFD MP R+ SW +++G+ +EE+ FER P +N +SWT I G+V
Sbjct: 141 DITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVL 200
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
A +F +L G+ P + S+ A + + S+ L+ K GFE+ V V
Sbjct: 201 IEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVV 260
Query: 222 CNSLI---TLSLKM-----------------------------GEVDLARSVFDR----- 244
+++ T + M G +D A +V+ R
Sbjct: 261 GTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS 320
Query: 245 --------------------------MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ + +VVSW ++ +++ + EA +F+ MP
Sbjct: 321 VPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPF 380
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
RN +SW+ MIA Y ++G E+A + + R P+ S + A ++++AL +G V
Sbjct: 381 RNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQV 440
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H+ +K G + + ++ NALI LY K R +FD + KD VS+NS + N
Sbjct: 441 HSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKD---TVSYNSFMSALVQN 497
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
+EA+++F+NMP + VSW+ IIS + Q + +F ML E+PN + +L
Sbjct: 498 NLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILL 557
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
S ++ + + G+ +H IKLG + + AL Y K + S +VFD M +++
Sbjct: 558 GLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIF 616
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
+W ++ G A+ G +E+I +++ M + PNE+T + +L ACSHSGLVD+G ++F SM
Sbjct: 617 TWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSM 676
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
Y + P HY C+VD+L R+G + AE FI MP EPDS W++LL CK +KN +I
Sbjct: 677 SSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEI 736
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
RA + L+ + + YV+LSNIY+S G W + VRKLM E+G+ K GCSW++++N
Sbjct: 737 GRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKN 796
Query: 699 QVHFF 703
++H F
Sbjct: 797 KMHSF 801
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 234/517 (45%), Gaps = 72/517 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+A I + GR+ E+ F+ PF+++I+W + I + NG L + ++
Sbjct: 37 SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR 96
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ S +A + D R G+ ++ N+++T ++ G++ LAR +
Sbjct: 97 TGTILLSGYARA-GRVRDARRVFDGMGV-------RNTVAWNAMVTCYVQNGDITLARKL 148
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M RDV SW +L + + EAR +F+ MPERN VSW+VMI+ Y A+
Sbjct: 149 FDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAW 208
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+FR M P VLSA+ L +H V K G E+DV + A+++ Y
Sbjct: 209 DMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGY 268
Query: 362 SK---------------------------CGETKDGRL--VFDSIVEKDVAHVVSWNSMI 392
+K ++ GR+ F + V S SM+
Sbjct: 269 TKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSML 328
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM---------- 442
G G++++AK LFD + + N VSW+A+I+GY++++ D +FN M
Sbjct: 329 TGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAG 388
Query: 443 LLSGEIPNKSTFSSVLC---------------------ASASVASLEKGKDLHGKIIKLG 481
+++G N + +++ A +++ +LE GK +H +K G
Sbjct: 389 MIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAG 448
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++ ++ AL Y K I S R++FDRM K+ +S+ + L ++ E+ ++F
Sbjct: 449 CQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFN 508
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
M +P+ ++ +++ AC+ + ++ ++ F SM
Sbjct: 509 NMP----SPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 203/388 (52%), Gaps = 25/388 (6%)
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+G L EAR +FD MP R+ ++W+ MI Y +G P+ L ++ + + T I+
Sbjct: 46 LGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGT----IL 101
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LS A +R V +G+ ++ NA++ Y + G+ R +FD++ +DV
Sbjct: 102 LSGYARAGRVRDARRVFD---GMGV-RNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDV 157
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+ SWN+M+ GY + MEEA+ LF+ MP+RN VSW+ +ISGY+ +Q + +F M
Sbjct: 158 S---SWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTM 214
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD- 501
L G P + SVL A + + +H + K GF DV +GTA+ + Y K +
Sbjct: 215 LCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNM 274
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++S+ + F+ M +NE +W+ ++ L+++G ++ +++ S+ P+ ++L+ L
Sbjct: 275 LDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV-PSRTSMLTGL-- 331
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
+ G +D F+ + +PN + ++ ++ + EAED N MPF ++
Sbjct: 332 -ARYGRIDDAKILFDQIH-----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-NTI 384
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKL 649
+WA +++G Y +E+A+ +L L
Sbjct: 385 SWAGMIAG---YARNGRSEQALVSLQAL 409
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 171/387 (44%), Gaps = 25/387 (6%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F+ V N +I ++ ++ +++FD M ++ VS+ + +S +++ +E+ F
Sbjct: 451 FNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM 510
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +V+SWT I Q EA+++F +L PN + + + +LG
Sbjct: 511 PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQ 570
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + K G + + V N+L+++ K D + VFD ME+RD+ +W I+ + + G
Sbjct: 571 QIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHG 629
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA R++ M NEV++ ++ + SG +E + F+ M+ Y P +
Sbjct: 630 LGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHY 689
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ ++ L ++ H + + IE D I +AL+ + GR + +
Sbjct: 690 ACMVDLLGRAGDVQGAEHF---IYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFS 746
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSWSAI-------ISGYL 427
+ ++ ++ + Y G +E ++ M +R SW I ++G
Sbjct: 747 IEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDE 806
Query: 428 EHKQFDLVFAVFNEMLL----SGEIPN 450
EH+Q ++A E+ +G +P+
Sbjct: 807 EHEQIQNIYATLWELYTLLKATGYVPD 833
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 18/284 (6%)
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G G++ EA+E+FD+MP R+ ++W+++I Y + D ++ + +SG N T +
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADA--ISGG--NLRTGT 99
Query: 456 SVLCASASVASLEKGKDL-HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
+L A + + + G ++ ++ A+ Y ++GDI +R++FD MP
Sbjct: 100 ILLSGYARAGRVRDARRVFDGMGVRNTVAWN-----AMVTCYVQNGDITLARKLFDAMPS 154
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ SW M+ G S +E+ NLFE M + + + I + H +
Sbjct: 155 RDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHG----RAWDM 210
Query: 575 FNSM--EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
F +M E + +PN V L + G L ++ FE D ++L+G
Sbjct: 211 FRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYT- 269
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
K+ + + AVK +A + + + + AGR DA V
Sbjct: 270 -KDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAV 312
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 322/573 (56%), Gaps = 5/573 (0%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F N + V ++ G F+A+ L +G++ T + + + CA
Sbjct: 7 FHSNRTKRVPCIVKSLLHLSSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSL 66
Query: 201 RLGLSVFGLIFKAGFEK-HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
+LG V + G ++ + + N LI + K G+ A VFD M R++ SW +L
Sbjct: 67 KLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSG 126
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ ++G + AR++FD+MPE++ VSW+ M+ Y +SG+ +A R +R++ R N F
Sbjct: 127 YAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSF 186
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ +L+ +K L H VL G ++ IS++++D Y+KC E D R +FD ++
Sbjct: 187 AGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMII 246
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+DV ++W +M+ GY G +E A+ELFD MP++N V+W+++I+GY H +F
Sbjct: 247 RDV---LAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELF 303
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+M+ P++ TFSS LCASAS+ASL GK +HG +I+ + + ++L D Y+K
Sbjct: 304 TKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKC 363
Query: 500 GDIESSRRVFDRMPDK-NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G +E R VFD M DK + + W ++ LA+ G +E+I +F++M + + P+ +T++ +
Sbjct: 364 GCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVL 423
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSHSGLV +GL+ + S+ + + PN HY C++D+L R+G + + MP +P
Sbjct: 424 LNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKP 483
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
+ W +LL C+ + N + + + +L + A YVLLS+I+A+ GRW NVR+
Sbjct: 484 NDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQ 543
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LM E+ +RK SW+E+ N+VH F +P
Sbjct: 544 LMNERHVRKDRAISWIEIENKVHSFTASDRLHP 576
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 217/397 (54%), Gaps = 12/397 (3%)
Query: 26 CLLKDI---TSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK-- 80
C++K + +SQ + Q + G L + GI T L+ + KSL+ + V
Sbjct: 17 CIVKSLLHLSSQGQLFQAISSLGLLSRNGIRLPSK-TLAYLLQQCANTKSLKLGKWVHLH 75
Query: 81 ----DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
L + + N +IN + G+ A ++FD M RN SW ++SG+ K G+++
Sbjct: 76 LKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKP 135
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ F++ P ++V+SW + + ++GF +AL+ + +L G+ NE +F+ + C +
Sbjct: 136 ARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVK 195
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ + L G + AGF ++ + +S++ K E+ AR +FD M RDV++WT +
Sbjct: 196 VKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTM 255
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + + GD+ AR +FD MPE+N V+W+ +IA Y + +A LF +M + +P+
Sbjct: 256 VSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQ 315
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
FS L A AS+ +L G +H ++++ I + + ++LID+YSKCG + GRLVFD
Sbjct: 316 FTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDL 375
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+ +K VV WN++I +G+ +EA ++FD+M +
Sbjct: 376 MGDK--WDVVLWNTIISSLAQHGRGQEAIQMFDDMVR 410
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/590 (34%), Positives = 324/590 (54%), Gaps = 66/590 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALIS + K ++ ++ F+R P Q+ ISW + I G NG + EA++LF+++ G +
Sbjct: 450 ALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHEL 509
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T S+ ACA + + +G V G K G +GE LA +
Sbjct: 510 DSTTLLSVLPACARSHYWFVGRVVHGYSVKTGL----------------IGETSLANA-- 551
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+LD++ D +IF M ++N VSW+ MI Y ++G ++
Sbjct: 552 -------------LLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAG 598
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L ++M KP+ + VL A ++L+ G VH + ++ G+EK + ++NAL+++Y
Sbjct: 599 LLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYV 658
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
C ++ RLVFD + KD ++SWN++IGGY N E+
Sbjct: 659 NCRNMEEARLVFDHVTNKD---IISWNTLIGGYSRNNFANES------------------ 697
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
F++F++MLL + PN T + +L A AS++SLE+G+++H ++ GF
Sbjct: 698 -------------FSLFSDMLLQFK-PNTVTMTCILPAVASISSLERGREIHAYALRRGF 743
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D + AL D Y K G + +R +FDR+ KN ISWT+M+ G G K+++ LFE+
Sbjct: 744 LEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQ 803
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M + + P+ + ++L+AC HSGL +G K+FN+M Y I+P +HYTC+VD+LS +G
Sbjct: 804 MRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTG 863
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L EA +FI SMP EPDS+ W SLL GC+ +++ ++AE+ ++KL E+ YVLL+N
Sbjct: 864 NLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLAN 923
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
IYA A RW ++ + +GLR++ GCSW+EVR +VH F ++P+
Sbjct: 924 IYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPE 973
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/550 (25%), Positives = 229/550 (41%), Gaps = 120/550 (21%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L +L + G+ +HG+ +K+G L+ L S +S
Sbjct: 301 TVLSVLPACAELGFELVGKVVHGYSMKSG-----------LLWDLESVQS---------- 339
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS-WTALISGFMKHGRVEESMWYF 141
G D + + ++ ++ G++ A+R+FD MP + V W ++ G+ K EES
Sbjct: 340 -GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEES---- 394
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
L LF ++ E G+ P+E S + K ++ R
Sbjct: 395 ---------------------------LLLFEQMHELGITPDEHALSCLLKCITCLSCAR 427
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
GL G + K GF +VCN+LI+ K +D A VFDRM +D +SW +
Sbjct: 428 DGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSV----- 482
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
I+ +G EA LF +M + +++
Sbjct: 483 --------------------------ISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLS 516
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VL A A G VH + +K G+ + ++NAL+D+YS C + +F ++ +K+
Sbjct: 517 VLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKN 576
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
VVSW +MI Y G FD V + E
Sbjct: 577 ---VVSWTAMITSYTRAG-------------------------------LFDKVAGLLQE 602
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M+L G P+ +SVL A SL++GK +HG I+ G + + AL + Y +
Sbjct: 603 MVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRN 662
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+E +R VFD + +K+ ISW ++ G + + +A ES +LF +M PN +T+ +L A
Sbjct: 663 MEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDM-LLQFKPNTVTMTCILPA 721
Query: 562 CSHSGLVDKG 571
+ +++G
Sbjct: 722 VASISSLERG 731
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 217/520 (41%), Gaps = 112/520 (21%)
Query: 63 LIMYLGSRKSLEA----NEIVKDLNG--FDLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
++ G +SLEA + +V+ G V+ ++ A ++ G+L A+ +FD MP R
Sbjct: 100 VVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPR 159
Query: 117 --NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
+ WT+L+S + K G FQ E + LF +
Sbjct: 160 VADVRVWTSLMSAYAKAG------------DFQ-------------------EGVSLFRQ 188
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ GV P+ S + K A + G + GL+ K G + +V N+LI L + G
Sbjct: 189 MQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGC 248
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
++ A VFD M RD + SW+ I+ Y +
Sbjct: 249 MEDAMQVFDSMHARDAI-------------------------------SWNSTISGYFSN 277
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV--- 351
G+ + A LF +M + ++ VL A A L G VH + +K G+ D+
Sbjct: 278 GWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESV 337
Query: 352 ------FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
+ + L+ +Y KCG+ R VFD++ K HV WN ++GGY + EE+
Sbjct: 338 QSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHV--WNLIMGGYAKAAEFEESL 395
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
LF+ M +E+ G P++ S +L ++
Sbjct: 396 LLFEQM----------------------------HEL---GITPDEHALSCLLKCITCLS 424
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
G HG ++KLGF + AL YAKS I+++ VFDRMP ++ ISW ++
Sbjct: 425 CARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVIS 484
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
G +G E+I LF M + T+LSVL AC+ S
Sbjct: 485 GCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARS 524
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 76/432 (17%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L +L + GR +HG+ +KTG+ E L LL MY N+I +++
Sbjct: 513 TLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNM 572
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGF-----MKHGR 133
++V MI + + G ++ L M + + + T+++ GF +K G+
Sbjct: 573 AQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGK 632
Query: 134 ------------------------------VEESMWYFERNPFQNVISWTAAICGFVQNG 163
+EE+ F+ +++ISW I G+ +N
Sbjct: 633 SVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNN 692
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
F+ E+ LF +L KPN VT + I A A I+ G + + GF + N
Sbjct: 693 FANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSN 751
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L+ + +K G + +AR +FDR+ K++++SWT
Sbjct: 752 ALVDMYVKCGALLVARVLFDRLTKKNLISWT----------------------------- 782
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH-VHAHV 342
+MIA Y G ++A LF QM +P+T+ FS +L A G +A
Sbjct: 783 --IMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMR 840
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQM 401
+ IE + ++DL S G K+ +S+ +E D + W S++ G ++ +
Sbjct: 841 KEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSS---IWVSLLHGCRIHRDV 897
Query: 402 EEAKELFDNMPK 413
+ A+++ D + K
Sbjct: 898 KLAEKVADRVFK 909
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 399 GQMEEAKELFDNMPKR-NDVS-WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
G + A+ +FD MP R DV W++++S Y + F ++F +M G P+ S
Sbjct: 144 GDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSC 203
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL AS+ S+ +G+ +HG + KLG + AL Y++ G +E + +VFD M ++
Sbjct: 204 VLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARD 263
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG--LVDKGLKY 574
ISW + G +G+ +++LF +M + +T+LSVL AC+ G LV K +
Sbjct: 264 AISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHG 323
Query: 575 FN-------SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
++ +E + + +V M + G + A ++MP + + + W ++
Sbjct: 324 YSMKSGLLWDLESVQSGIDEALGSK-LVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIM 382
Query: 628 SG 629
G
Sbjct: 383 GG 384
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
Query: 466 SLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK--NEISWTV 522
SLE + H + G LG L Y K GD+ +R VFD MP + + WT
Sbjct: 109 SLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTS 168
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ A++G +E ++LF +M+ ++P+ + VL + G + +G +E +
Sbjct: 169 LMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKL- 227
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ ++ + SR G + +A +SM D+ +W S +SG Y + +RA
Sbjct: 228 GLGEACAVANALIALYSRCGCMEDAMQVFDSM-HARDAISWNSTISG---YFSNGWHDRA 283
Query: 643 VKNLWKLAEE 652
V K+ E
Sbjct: 284 VDLFSKMWSE 293
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/643 (32%), Positives = 346/643 (53%), Gaps = 73/643 (11%)
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+K L AN ++++ V+ C + ++G+ + A+RLFD +PE
Sbjct: 43 KKGLNANPVLQNR-----VMTFCCTH---EYGDFQYARRLFDEIPE-------------- 80
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
N+ W I G+ + F + L+L++L GVKP+ TF
Sbjct: 81 -----------------PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 123
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ K G + G + K G + +V V +L+ + L G++D
Sbjct: 124 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLD------------- 170
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
AR +FD P+ + ++W+++I+ YN+ G EE+ RLF M
Sbjct: 171 ------------------TARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMED 212
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
P T +VLSA + LK LR+G VH++V +E ++ + NA+ID+Y+ CGE
Sbjct: 213 KQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDS 272
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+F S+ +D+ +SW +++ G+ G+++ A+ FD MP+++ VSW+A+I GY+
Sbjct: 273 ALGIFRSMNNRDI---ISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 329
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+F +F M + P++ T SVL A A + +LE G+ + I + D+F+
Sbjct: 330 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 389
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
AL D Y K GD++ + +F M +++ +WT M+ GLA +G+ ++++++F M K SI
Sbjct: 390 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 449
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+E+T + VL AC+H+GLVDKG KYF M + I+PN HY C+VD+L+R+GRL EA +
Sbjct: 450 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 509
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
I +MP + +S W +LL+GC+ Y+ +AE VK + +L ++ A YVLL NIYA+ R
Sbjct: 510 VIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKR 569
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
W D +R++M +KG++K+ GCS +E+ +VH F +P+
Sbjct: 570 WNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQ 612
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 232/523 (44%), Gaps = 101/523 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L K T + GR LHGH++K G+ ++ T L+ MYL
Sbjct: 124 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYL------------------- 164
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G L+ A+ +FD P+ + ++W +IS + K G+ EES
Sbjct: 165 ------------LCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESR-------- 204
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+LFL + + V P VT + AC+++ D R G V
Sbjct: 205 -----------------------RLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV 241
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ E ++ + N++I + GE+D A +F M RD++SWT I+ F +G++
Sbjct: 242 HSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEI 301
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR FD+MPE++ VSW+ MI Y +S +EA LFR M + KP+ VL+A
Sbjct: 302 DVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTAC 361
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L AL G + ++ + I+ D+F+ NALID+Y KCG+ +F + ++D
Sbjct: 362 AHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRD---KF 418
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+W +MI G +NG E+A ++F NM K +
Sbjct: 419 TWTAMIVGLAVNGHGEKALDMFSNMLK-------------------------------AS 447
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESS 505
+P++ T+ VL A ++KG+ ++ + G ++ L D A++G ++ +
Sbjct: 448 ILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEA 507
Query: 506 RRVFDRMPDK-NEISWTVMVRGL---AESGYAKESINLFEEME 544
V + MP K N I W ++ G ES A+ + E+E
Sbjct: 508 YEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 550
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/590 (33%), Positives = 329/590 (55%), Gaps = 66/590 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALIS + K R+E+++ F+ P +++ISW + I G NG +A++LF+++ G +
Sbjct: 24 ALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQEL 83
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T S+ AC + + +G V G + G S+ N+L
Sbjct: 84 DSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNAL----------------- 126
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
LD++ D +IF M ++N VSW+ MI Y ++G+ ++
Sbjct: 127 --------------LDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAG 172
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF++M +P+ + L A A ++L+ G VH + ++ GIE+ + ++NAL+++Y
Sbjct: 173 LFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYV 232
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG ++ R +FD + +KD +SWN++IGGY + EA
Sbjct: 233 KCGYMEEARFIFDHVTKKD---TISWNTLIGGYSRSNLANEA------------------ 271
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
F +FNEMLL PN T + +L A+AS++SLE+G+++H ++ G+
Sbjct: 272 -------------FTLFNEMLLQLR-PNAVTMACILPAAASLSSLERGREMHAYAVRRGY 317
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D F+ AL D Y K G + +RR+FD + +KN ISWT+M+ G G +++I LFE+
Sbjct: 318 LEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQ 377
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ + I P+ + ++L+ACSHSGL D+G ++FN+M + I+P +HY C+VD+L +G
Sbjct: 378 MKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTG 437
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L EA +FI +MP EPDS+ W SLL GC+ ++N ++AE+ + +++L E+ YVLL+N
Sbjct: 438 NLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLAN 497
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
IYA A RW ++ + +GLR++ GCSW+EVR + H FF + ++P+
Sbjct: 498 IYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQ 547
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 214/475 (45%), Gaps = 84/475 (17%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ G +HG+L+K G + + L+ Y S + +A + ++ D++ N +I
Sbjct: 1 MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60
Query: 98 IQWGNLEEAQRLFDGM-PERNEVSWTALIS------------------GF-MKHGRVEE- 136
G ++A LF M E E+ T L+S G+ ++ G + E
Sbjct: 61 ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120
Query: 137 -------------SMWYFERNPFQN-----VISWTAAICGFVQNGFSFEALKLFLKLLES 178
S W F+N V+SWTA I + + G + LF ++
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G++P+ +S A A + G SV G + G E+ + V N+L+ + +K G ++ A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
R +FD + K+D +SW + +I Y++S
Sbjct: 241 RFIFDHVTKKDTISW-------------------------------NTLIGGYSRSNLAN 269
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EAF LF +M +PN + +L A ASL +L G +HA+ ++ G +D F++NAL+
Sbjct: 270 EAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALV 328
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KR 414
D+Y KCG R +FD + K+ ++SW MI GYG++G+ +A LF+ M +
Sbjct: 329 DMYVKCGALLLARRLFDMLTNKN---LISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQP 385
Query: 415 NDVSWSAII-----SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+ S+SAI+ SG L + + A+ NE + ++ + + +LC + ++
Sbjct: 386 DAGSFSAILYACSHSG-LRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNL 439
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 130/277 (46%), Gaps = 10/277 (3%)
Query: 369 DGRLVFDSIVEKDV-AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
DG +V +V+ A N++I Y + ++E+A +FD MP+R+ +SW++II G
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+ +D +F M L G+ + +T SV+ A G +HG ++ G +
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
LG AL D Y+ D S+ ++F M KN +SWT M+ +G+ + LF+EM
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 548 ITPNELTILSVL--FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
I P+ I S L FA + S K + + I + P +++M + G +
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVA---NALMEMYVKCGYME 238
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
EA FI + D+ +W +L+ G Y +A A
Sbjct: 239 EAR-FIFDHVTKKDTISWNTLIGG---YSRSNLANEA 271
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 158/355 (44%), Gaps = 45/355 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L ++ + G +HG+ ++TG+ E L LL MY N+I +++
Sbjct: 87 TLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNM 146
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PE--------------------- 115
++V MI + + G+ ++ LF M P+
Sbjct: 147 EQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGK 206
Query: 116 -------RNEVS-----WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
RN + AL+ ++K G +EE+ + F+ ++ ISW I G+ ++
Sbjct: 207 SVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSN 266
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ EA LF ++L ++PN VT + I A A ++ G + + G+ + V N
Sbjct: 267 LANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVAN 325
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ER 279
+L+ + +K G + LAR +FD + ++++SWT+++ + G +A +F++M +
Sbjct: 326 ALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQP 385
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALR 333
+ S+S ++ + SG +E +R F M + +P ++ ++ L L+
Sbjct: 386 DAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLK 440
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/624 (33%), Positives = 327/624 (52%), Gaps = 81/624 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
VH+C+I + + E+N L+ +++ GR++E+ F+ ++
Sbjct: 50 VHDCIIKSRM----------------EQNAHVMNNLLHVYIECGRLQEARCVFDALVKKS 93
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
SW A I G+V++ + +A++LF ++ GV+PN T+ I KACA ++ + G V
Sbjct: 94 GASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHA 153
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I G E DV T +L ++ + G + E
Sbjct: 154 CIRHGGLES-------------------------------DVRVGTALLRMYGKCGSINE 182
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARRIFD + + +SW+VMI Y QSG +EA+RL QM + FKPN + +L+A AS
Sbjct: 183 ARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACAS 242
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
AL+ VH H L G+E DV + AL+ +Y+K
Sbjct: 243 EGALKWVKRVHRHALDAGLELDVRVGTALVQMYAK------------------------- 277
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+G +++A+ +FD M R+ VSW+ +I + EH + + +F +M G
Sbjct: 278 ---------SGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCK 328
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ F S+L A AS +LE K +H + G DV +GTAL Y+KSG I+ +R V
Sbjct: 329 PDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVV 388
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FDRM +N +SW M+ GLA+ G ++++ +F M + P+ +T ++VL ACSH+GLV
Sbjct: 389 FDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLV 448
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
D+G + +M +Y I+P+ H C+VD+L R+GRL EA+ FI++M +PD W +LL
Sbjct: 449 DEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLG 508
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+TY N ++ E K KL ++ A YVLLSNIYA AG+W VR +M E+G+RK
Sbjct: 509 SCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKE 568
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
G SW+EV N++H F +P+
Sbjct: 569 PGRSWIEVDNKIHDFLVADSSHPE 592
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 217/463 (46%), Gaps = 67/463 (14%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA+ + + L+ G+ + + + K C + D V I K+ E++ V N+L+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ ++ G + AR VFD + K+ SW ++ ++E
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVE------------------------ 106
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
+ E+A RLFR+M +PN + I+L A ASL AL+ G VHA + G
Sbjct: 107 -------HKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGG 159
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+E DV + AL+ +Y KCG + R +FD+++ D ++SW MIG Y +G +EA
Sbjct: 160 LESDVRVGTALLRMYGKCGSINEARRIFDNLMNHD---IISWTVMIGAYAQSGNGKEAYR 216
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
L M + G PN T+ S+L A AS +
Sbjct: 217 LMLQMEQ-------------------------------EGFKPNAITYVSILNACASEGA 245
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L+ K +H + G DV +GTAL YAKSG I+ +R VFDRM ++ +SW VM+
Sbjct: 246 LKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGA 305
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
AE G E+ +LF +M+ P+ + LS+L AC+ +G ++ +K + ++
Sbjct: 306 FAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE-WVKKIHRHALDSGLEV 364
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ R T +V M S+SG + +A + M + +W +++SG
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISG 406
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 227/546 (41%), Gaps = 110/546 (20%)
Query: 20 YIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV 79
Y+E +LK Q ++ + +H +IK+ + + ++ LL +Y+ + EA +
Sbjct: 31 YVE----VLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVF 86
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER-------------------NEVS 120
L N MI ++ + E+A RLF M + +
Sbjct: 87 DALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALK 146
Query: 121 W--------------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
W TAL+ + K G + E+ F+ ++ISWT I +
Sbjct: 147 WGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYA 206
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
Q+G EA +L L++ + G KPN +T+ SI ACA + V AG E V
Sbjct: 207 QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVR 266
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V +L+ + K G +D +AR +FD M R+
Sbjct: 267 VGTALVQMYAKSGSID-------------------------------DARVVFDRMKVRD 295
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+VMI + + G EA+ LF QM KP+ F +L+A AS AL +H
Sbjct: 296 VVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHR 355
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
H L G+E DV + AL+ +YSK G D R+VFD + V +VVSWN+MI G +G
Sbjct: 356 HALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM---KVRNVVSWNAMISGLAQHGL 412
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
++A E VF M G P++ TF +VL A
Sbjct: 413 GQDALE-------------------------------VFRRMTAHGVKPDRVTFVAVLSA 441
Query: 461 SASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEI 518
+ +++G+ + + ++ G DV + D ++G + ++ D M D +E
Sbjct: 442 CSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEA 501
Query: 519 SWTVMV 524
+W ++
Sbjct: 502 TWGALL 507
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 195/458 (42%), Gaps = 80/458 (17%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +LK S + + G+ +H + G+ + + T LL MY EA I +L
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSW----------------- 121
D++ MI A Q GN +EA RL M + N +++
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 122 ------------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
TAL+ + K G ++++ F+R ++V+SW I F ++G
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHG 310
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EA LFL++ G KP+ + F SI ACA + +G E V V
Sbjct: 311 RGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGT 370
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L+ + K G +D +AR +FD M RN VS
Sbjct: 371 ALVHMYSKSGSID-------------------------------DARVVFDRMKVRNVVS 399
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W+ MI+ Q G ++A +FR+MT + KP+ F VLSA + + G + +
Sbjct: 400 WNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMT 459
Query: 344 KI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQM 401
++ GIE DV N ++DL + G + +L D++ V+ D A +W +++G G +
Sbjct: 460 QVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEA---TWGALLGSCRTYGNV 516
Query: 402 E----EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
E AKE PK N ++ + + Y E ++D+V
Sbjct: 517 ELGELVAKERLKLDPK-NAATYVLLSNIYAEAGKWDMV 553
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
V L G I + + VL L K +H IIK + + L
Sbjct: 13 IVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHV 72
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y + G ++ +R VFD + K+ SW M+ G E +A++++ LF EM + PN T
Sbjct: 73 YIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTY 132
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+ +L AC+ + G K ++ ++ + R T ++ M + G ++EA +++
Sbjct: 133 MIILKACASLSALKWG-KEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL- 190
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE----HPAGYVLLSNIYASAG--R 669
D +W ++ Y + A + + ++ +E + YV + N AS G +
Sbjct: 191 MNHDIISWTVMIG---AYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247
Query: 670 WI 671
W+
Sbjct: 248 WV 249
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 340/630 (53%), Gaps = 74/630 (11%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V+ C N+Q G L G+ + + AL+ ++K +E++ + F++
Sbjct: 35 FVIRACRDLKNLQMGRLIHHIVYKFGL-DLDHFVCAALVDMYVKCREIEDARFLFDKMQE 93
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+++++WT I G+ + G + E+L LF K+ E GV P++V ++ ACA
Sbjct: 94 RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA----------- 142
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR----DVVSWTVILDVFIE 262
K+G + AR + D ++++ DV+ T ++D++ +
Sbjct: 143 ------------------------KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 178
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + AR IFD M E+N +SWS MIA Y G +A LFR M P+ + +
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A + LK L+ G +H V K G++ D F+ AL+D+Y KC E
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCRE---------------- 282
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+E+A+ LFD MP+R+ V+W+ +I GY E + +F++M
Sbjct: 283 ------------------IEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKM 324
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G +P+K +V+ A A + ++ K + + I + F DV LGTA+ D +AK G +
Sbjct: 325 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 384
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
ES+R +FDRM +KN ISW+ M+ G +++++LF M ++ I PN++T++S+L+AC
Sbjct: 385 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 444
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH+GLV++GL++F+ M Y+++ + +HYTCVVD+L R+GRL EA I SM E D
Sbjct: 445 SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGL 504
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W + L C+T+K+ +AE+A +L +L ++P Y+LLSNIYA+AGRW D R LM++
Sbjct: 505 WGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQ 564
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ L+K G +W+EV N+ H F +P+
Sbjct: 565 RRLKKIPGWTWIEVDNKSHQFSVGDTTHPR 594
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 194/413 (46%), Gaps = 75/413 (18%)
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
M+ + + G F FR++ R +P+ V+ A LK L+ G +H V K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
++ D F+ AL+D+Y KC E +D R +FD + E+D +V+W MIGGY G+ E+
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD---LVTWTVMIGGYAECGKANESLV 117
Query: 407 LFDNM-------------------PKRNDVSWSAIISGYLEHKQFDL------------- 434
LF+ M K + + II Y++ K+F L
Sbjct: 118 LFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYA 177
Query: 435 --------------------------------------VFAVFNEMLLSGEIPNKSTFSS 456
+F ML SG +P+K T +S
Sbjct: 178 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLAS 237
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+L A + + +L+ G+ +H + K G D F+ AL D Y K +IE +R +FD+MP+++
Sbjct: 238 LLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERD 297
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
++WTVM+ G AE G A ES+ LF++M + + P+++ +++V+FAC+ G + K + +
Sbjct: 298 LVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RTID 356
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + T ++DM ++ G + A + + M E + +W+++++
Sbjct: 357 DYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAA 408
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/551 (24%), Positives = 237/551 (43%), Gaps = 143/551 (25%)
Query: 47 LIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN---GFDLVVHNC--MINANIQWG 101
LI+ G + Y T +I K+L+ ++ + G DL C +++ ++
Sbjct: 21 LIRCGARPDNY-TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCR 79
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE------------------- 142
+E+A+ LFD M ER+ V+WT +I G+ + G+ ES+ FE
Sbjct: 80 EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVF 139
Query: 143 -------------------RNPFQ-NVISWTAAI-----CGFVQ---------------- 161
R FQ +VI TA I CG V+
Sbjct: 140 ACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVIS 199
Query: 162 ----------NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+G +AL LF +L SG+ P+++T +S+ AC+++ + ++G + +++
Sbjct: 200 WSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVY 259
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K G + VC +L+ + K E++ AR +FD+M +RD+V+WTV++ + E G+ E+
Sbjct: 260 KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLV 319
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FD+M E V P+ V+ A A L A
Sbjct: 320 LFDKMREEGVV-------------------------------PDKVAMVTVVFACAKLGA 348
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
+ + ++ + + DV + A+ID+++KCG + R +FD + EK+ V+SW++M
Sbjct: 349 MHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN---VISWSAM 405
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I YG +GQ +A +LF ML SG +PNK
Sbjct: 406 IAAYGYHGQGRKALDLFPM-------------------------------MLRSGILPNK 434
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
T S+L A + +E+G + + DV T + D ++G ++ + ++ +
Sbjct: 435 ITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIE 494
Query: 511 RMP-DKNEISW 520
M +K+E W
Sbjct: 495 SMTVEKDEGLW 505
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 112/290 (38%), Gaps = 70/290 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H + K G+ + ++ L+ MY R+ +A + + DLV MI +
Sbjct: 251 GRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAE 310
Query: 100 WGNLEEAQRLFDGMPERNEVS--------------------------------------- 120
GN E+ LFD M E V
Sbjct: 311 CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 370
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TA+I K G VE + F+R +NVISW+A I + +G +AL LF +L SG+
Sbjct: 371 GTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 430
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
PN++T S+ AC+ GL F L+++
Sbjct: 431 LPNKITLVSLLYACSHAGLVEEGLRFFSLMWE---------------------------- 462
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIA 289
D + DV +T ++D+ G L EA ++ + M E++E W +
Sbjct: 463 --DYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLG 510
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/643 (32%), Positives = 345/643 (53%), Gaps = 73/643 (11%)
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+K L AN ++++ V+ C + ++G+ + A+RLFD +PE
Sbjct: 64 KKGLNANPVLQNR-----VMTFCCTH---EYGDFQYARRLFDEIPE-------------- 101
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
N+ W I G+ + F + L+L++L GVKP+ TF
Sbjct: 102 -----------------PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 144
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ K G + G + K G + +V V +L+ + L G++D
Sbjct: 145 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLD------------- 191
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
AR +FD P+ + ++W+++I+ YN+ G EE+ RLF M
Sbjct: 192 ------------------TARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMED 233
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
P T +VLSA + LK LR+G VH++V +E ++ + NA+ID+Y+ CGE
Sbjct: 234 KQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDS 293
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+F S+ +D+ +SW +++ G+ G+++ A+ FD MP+++ VSW+A+I GY+
Sbjct: 294 ALGIFRSMNNRDI---ISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS 350
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+F +F M + P++ T SVL A A + +LE G+ + I + D+F+
Sbjct: 351 NRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR 410
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
AL D Y K GD++ + +F M +++ +WT M+ GLA +G+ ++++++F M K SI
Sbjct: 411 NALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 470
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+E+T + VL AC+H+GLVDKG KYF M + I+PN HY C+VD+L+R+GRL EA +
Sbjct: 471 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 530
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
I +MP + +S W +LL+GC+ Y+ +AE VK + +L ++ A YVLL NIYA+ R
Sbjct: 531 VIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKR 590
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
W D +R++M +KG++K GCS +E+ +VH F +P+
Sbjct: 591 WNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQ 633
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 232/523 (44%), Gaps = 101/523 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L K T + GR LHGH++K G+ ++
Sbjct: 145 LFKGFTRDIALEYGRQLHGHVLKHGLQ-------------------------------YN 173
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ VH ++ + G L+ A+ +FD P+ + ++W +IS + K G+ EES
Sbjct: 174 VFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESR-------- 225
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+LFL + + V P VT + AC+++ D R G V
Sbjct: 226 -----------------------RLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV 262
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ E ++ + N++I + GE+D A +F M RD++SWT I+ F +G++
Sbjct: 263 HSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEI 322
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR FD+MPE++ VSW+ MI Y +S +EA LFR M + KP+ VL+A
Sbjct: 323 DVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTAC 382
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L AL G + ++ + I+ D+F+ NALID+Y KCG+ +F + ++D
Sbjct: 383 AHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRD---KF 439
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+W +MI G +NG E+A ++F NM K +
Sbjct: 440 TWTAMIVGLAVNGHGEKALDMFSNMLK-------------------------------AS 468
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESS 505
+P++ T+ VL A ++KG+ ++ + G ++ L D A++G ++ +
Sbjct: 469 ILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEA 528
Query: 506 RRVFDRMPDK-NEISWTVMVRGL---AESGYAKESINLFEEME 544
V + MP K N I W ++ G ES A+ + E+E
Sbjct: 529 YEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 571
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 185/417 (44%), Gaps = 79/417 (18%)
Query: 54 KERYLTTRLLIMYLGSRKSLEANEIVKDLNGF--------DLVVHNCMINANIQWGNLEE 105
K+ TT L++ L + L+ K ++ + +LV+ N MI+ G ++
Sbjct: 234 KQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDS 293
Query: 106 AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
A +F M R+ +SWT ++SGF G ++ + YF++ P ++ +SWTA I G++++
Sbjct: 294 ALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRF 353
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
EAL+LF + + VKP+E T S+ ACA + LG + I + + + V N+L
Sbjct: 354 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 413
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + K G+VD A S+F M +RD + +W+
Sbjct: 414 IDMYFKCGDVDKAESIFREMSQRD-------------------------------KFTWT 442
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL-K 344
MI +G+ E+A +F M + S P+ + VLSA + G + +
Sbjct: 443 AMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQ 502
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
GIE ++ L+DL ++ G +++EA
Sbjct: 503 HGIEPNIAHYGCLVDLLARAG----------------------------------RLKEA 528
Query: 405 KELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLC 459
E+ +NMP K N + W A+++G +++ D+ V ++L E+ P+ +LC
Sbjct: 529 YEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL---ELEPDNGAVYVLLC 582
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/630 (34%), Positives = 337/630 (53%), Gaps = 64/630 (10%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK-HGRVEESMWYFER 143
F V C NI G + L G E + ALI F+K +G +E + F+R
Sbjct: 45 FTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDR 104
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +NV++WT I F Q GFS +A+ LFL ++ SG P+ T S + ACAE+ LG
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG 164
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
L+ K+G + V V SL+ + A+ V D
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDM--------YAKCVAD-------------------- 196
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSG-YPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + +AR++FD MP N +SW+ +I Y QSG EA LF +M + KPN FS V
Sbjct: 197 GSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSV 256
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A A+L + G V+A V+K+ + + N+LI +YS+C
Sbjct: 257 LKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRC------------------ 298
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
G ME A++ FD + ++N VS++ I++ Y + + F +FNE+
Sbjct: 299 ----------------GNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEI 342
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
+G N TF+S+L ++S+ ++ KG+ +H +I+K GF ++ + AL Y++ G+I
Sbjct: 343 EGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNI 402
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
E++ +VF+ M D N ISWT M+ G A+ G+A ++ F +M + ++PNE+T ++VL AC
Sbjct: 403 EAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSAC 462
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH GL+ +GLK+F SM+ + I P HY CVVD+L RSG L EA + +NSMPF+ D+
Sbjct: 463 SHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALV 522
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
+ L C+ + N + + A + + + PA Y+LLSN++ASAG+W + +RK M E
Sbjct: 523 LRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKE 582
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ L K GCSW+EV N+VH F+ +P+
Sbjct: 583 RNLTKEAGCSWIEVENKVHKFYVGDTSHPQ 612
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 40/244 (16%)
Query: 83 NGFDLVVHNC--MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
+GF +H C +I+ + GN+E A ++F+ M + N +SWT++I+GF KH
Sbjct: 380 SGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKH--------- 430
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
GF+ AL+ F K+LE+GV PNEVT+ ++ AC+ +
Sbjct: 431 ----------------------GFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLI 468
Query: 201 RLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILD 258
GL F + + G + ++ L + G ++ A + + M K D + L
Sbjct: 469 SEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLG 528
Query: 259 VFIEMG--DLGE--ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
G DLG+ A I ++ P + ++ ++ + +G EE + ++M +
Sbjct: 529 ACRVHGNMDLGKHAAEMILEQDP-HDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTK 587
Query: 315 NTSC 318
C
Sbjct: 588 EAGC 591
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/724 (30%), Positives = 357/724 (49%), Gaps = 104/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L G LHG ++K G+ E ++ L+ +Y + A +I ++ D
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISG--------------- 127
+ +N +I+ Q G + A +LF+ M + + V+ +L+S
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 128 --------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
++K +E + YF +NV+ W + + Q G E
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSE 398
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ +FL++ G+ PN+ T+ SI + C + LG + + K+GF+ +V VC
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVC----- 453
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+V++D++ + G+L AR I + E + VSW+ M
Sbjct: 454 --------------------------SVLIDMYAKHGELDTARGILQRLREEDVVSWTAM 487
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q EA +LF++M + + FS +SA A ++AL G +HA G
Sbjct: 488 IAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGY 547
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+D+ I NAL+ LY++CG +D L
Sbjct: 548 SEDLSIGNALVSLYARCGRAQDAYLA---------------------------------- 573
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ + ++++SW+A+ISG+ + + VF++M +G N TF S + A+A+ A++
Sbjct: 574 FEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANI 633
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +H +IK G+ + L Y+K G IE ++R F MP+KN +SW M+ G
Sbjct: 634 KQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGY 693
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ GY E+++LFEEM++ + PN +T + VL ACSH GLV++GL YF SM + + P
Sbjct: 694 SQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPK 753
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CVVD+L R+ L A +FI MP EPD+ W +LLS C +KN +I E A ++L
Sbjct: 754 PEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLL 813
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L E A YVLLSN+YA +G+W R++M ++G++K G SW+EV+N +H FF
Sbjct: 814 ELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGD 873
Query: 708 DHNP 711
+P
Sbjct: 874 RLHP 877
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/660 (24%), Positives = 295/660 (44%), Gaps = 115/660 (17%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E + ++T L L + + ++ + LH + K+G E L +RL+ +YL +
Sbjct: 3 ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVD 62
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN---------------- 117
A ++ D+ ++ N +I+ + + LF M N
Sbjct: 63 NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122
Query: 118 ------------------------EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWT 153
+ LI + K+G V+ + FER ++ +SW
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
A I G QNG EA+ LF ++ +S V P FSS+ AC +I F+LG + G I K
Sbjct: 183 AMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKW 242
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF 273
G VCN+L+TL + G + A +F +M +RD
Sbjct: 243 GLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD------------------------ 278
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
+S++ +I+ Q G+ + A +LF +M KP+ + +LSA AS+ A
Sbjct: 279 -------RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGY 331
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G +H++V+K+G+ D+ I +L+DLY KC + + F + + +VV WN M+
Sbjct: 332 KGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYF---LTTETENVVLWNVMLV 388
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
YG G + E+ + +F +M + G +PN+ T
Sbjct: 389 AYGQLGNLSES-------------------------------YWIFLQMQIEGLMPNQYT 417
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ S+L S+ +L+ G+ +H ++IK GF ++V++ + L D YAK G+++++R + R+
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+++ +SWT M+ G + E++ LF+EME I + + S + AC+ +++G +
Sbjct: 478 EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQG-Q 536
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE----PDSNAWASLLSG 629
++ I + +V + +R GR +A + FE D+ +W +L+SG
Sbjct: 537 QIHAQSYISGYSEDLSIGNALVSLYARCGRAQDA-----YLAFEKIDAKDNISWNALISG 591
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 261/575 (45%), Gaps = 102/575 (17%)
Query: 94 INANIQ---W--------GNLEEAQRL--------FDGMPERNEVSWTALISGFMKHGRV 134
I AN+Q W G+L +A++L FDG +V + LI ++ HG V
Sbjct: 6 IRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDG----EDVLGSRLIDIYLAHGEV 61
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ ++ F+ P NV W I G + + + L LF ++ V P+E TF+S+ +AC
Sbjct: 62 DNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRAC 121
Query: 195 AEIN-DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
+ F++ + I GF VCN LI L K G VDLA+ VF+R+ +D VSW
Sbjct: 122 SGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSW 181
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
MI+ +Q+G +EA LF QM + +
Sbjct: 182 V-------------------------------AMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P FS VLSA ++ + G +H ++K G+ + F+ NAL+ LYS+
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSR---------- 260
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
W ++I A+++F M +R+ +S++++ISG + D
Sbjct: 261 --------------WGNLIA----------AEQIFSKMHRRDRISYNSLISGLAQRGFSD 296
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+F +M L P+ T +S+L A ASV + KGK LH +IK+G D+ + +L
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D Y K DIE++ F +N + W VM+ + G ES +F +M+ + PN+
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH--YTC--VVDMLSRSGRLSEAED 609
T S+L C+ G +D G + + IK + Y C ++DM ++ G L A
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQV-----IKSGFQFNVYVCSVLIDMYAKHGELDTARG 471
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + E D +W ++++G Y + A+K
Sbjct: 472 ILQRLR-EEDVVSWTAMIAG---YTQHDLFAEALK 502
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/634 (31%), Positives = 351/634 (55%), Gaps = 19/634 (2%)
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
R A+ + +++ N I A+++ G + +A+RLF MP R+ ++ +++G+
Sbjct: 90 RPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYA 149
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+GR+ +++ +F P + S+ + G S + E VK + V+++
Sbjct: 150 ANGRLPQALSFFRSIPRPDSFSYNTLLHAL---GVSSSLADVRALFDEMPVK-DSVSYNV 205
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ + A L F L EK N ++ ++ G + AR +FD + D
Sbjct: 206 MISSHANHGLVSLARHYFDL----APEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWD 261
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+SW ++ +++ + EA+++F++MP+R+ VSW+ M++ Y + G EA RLF
Sbjct: 262 AISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF----- 316
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
P F+ +A+ S A + V +K+ NA++ Y + ++
Sbjct: 317 -DVAPIRDVFT--WTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEE 373
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+ +FD++ ++VA SWN+M+ GY G ++EA+ +F MP+++ VSW+A+++ Y +
Sbjct: 374 AKELFDAMPCRNVA---SWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQI 430
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+ +F EM GE N+S F+ VL A +A+LE G LH ++IK G+ F+G
Sbjct: 431 GFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVG 490
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
AL Y K G +E + F+ M +++ +SW M+ G A G+ KE++ +F+ M KTS
Sbjct: 491 NALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTK 550
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+++T++ VL ACSHSGLV+KG+ YF SM + + HYTC++D+L R+GRL EA +
Sbjct: 551 PDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVN 610
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
+ MPFEPDS W +LL + ++N ++ A + +++L E+ YVLLSNIYAS+G+
Sbjct: 611 LMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGK 670
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
W D +R +M E+G++K G SW+EV+N+VH F
Sbjct: 671 WRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTF 704
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 254/528 (48%), Gaps = 89/528 (16%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
+KD S N++I A HG H K+ +L Y+ + + EA E+
Sbjct: 197 VKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDS 256
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+D + N ++ +Q +EEAQ++F+ MP+R+ VSW ++SG+ + G + E+ F
Sbjct: 257 RTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF 316
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++V +WTA + G+ QNG EA +
Sbjct: 317 DVAPIRDVFTWTAIVSGYAQNGMLEEAKR------------------------------- 345
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+F A +K+ N+++ ++ ++ A+ +FD M R+V SW +L +
Sbjct: 346 --------VFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYA 397
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L EAR IF MP+++ VSW+ M+A Y+Q G+ EE +LF++M R N S F+
Sbjct: 398 QAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFAC 457
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLS A + AL GM +H+ ++K G F+ NAL+ +Y KCG ++ F+ + E+D
Sbjct: 458 VLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERD 517
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAII-----SGYLE---- 428
VVSWN+MI GY +G +EA E+FD M K +D++ ++ SG +E
Sbjct: 518 ---VVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGIS 574
Query: 429 -----HKQFDLV-----FAVFNEML-LSGEI-------------PNKSTFSSVLCASASV 464
H+ F + + ++L +G + P+ + + ++L AS
Sbjct: 575 YFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIH 634
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG---DIESSRRVF 509
+ E G++ KI +L P + + L++ YA SG D++ R +
Sbjct: 635 RNSELGRNAAEKIFELE-PENAGMYVLLSNIYASSGKWRDVDKMRHIM 681
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 100/270 (37%), Gaps = 75/270 (27%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
++F + TC DI + +Q LH LIK G ++ LL MY
Sbjct: 453 SAFACVLSTC----ADIAALECGMQ---LHSRLIKAGYGVGCFVGNALLAMYF------- 498
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ G++EEA F+ M ER+ VSW +I+G+ +H
Sbjct: 499 ------------------------KCGSMEEAHSAFEEMEERDVVSWNTMIAGYARH--- 531
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
GF EAL++F + ++ KP+++T + AC
Sbjct: 532 ----------------------------GFGKEALEVFDTMRKTSTKPDDITLVGVLAAC 563
Query: 195 AEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVS 252
+ G+S F + + G +I L + G +D A ++ M + D
Sbjct: 564 SHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTM 623
Query: 253 WTVILDV--FIEMGDLGE--ARRIFDEMPE 278
W +L +LG A +IF+ PE
Sbjct: 624 WGALLGASRIHRNSELGRNAAEKIFELEPE 653
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/706 (33%), Positives = 366/706 (51%), Gaps = 67/706 (9%)
Query: 58 LTTRLLIMYLG-SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
T L I LG S + EA + + ++V +N MI+A + G + A+ LFD MP+R
Sbjct: 16 FTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQR 75
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWT----------------------- 153
N VSW ++I+G++ + VE++ F+R +++ SWT
Sbjct: 76 NLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLP 135
Query: 154 ---------AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
A I G+ + EA KLF ++L V V+++SI + +LGL
Sbjct: 136 DKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNV----VSWNSILSGYTKNGKMQLGL 191
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
F+A E++V N ++ + +G++D A F ++ +VVSW +L F G
Sbjct: 192 Q----FFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYG 247
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ EAR +F+EMP +N VSW+ MI Y + ++A++LF +M T+ + +
Sbjct: 248 RMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVR 307
Query: 325 ALASLKA----------------------LRSGMHVHAHVLKIGIE-KDVFISNALIDLY 361
L+A L+SG A+ + I +D N++I Y
Sbjct: 308 VGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGY 367
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+ CG T + +F +V KD+ VSWN+MI Y GQM++A E+F+ M +RN VSW++
Sbjct: 368 AHCGRTDEALRLFQEMVCKDM---VSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNS 424
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY+++ + F M GE P+++T L ASA++A+L G LH IK G
Sbjct: 425 LITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTG 484
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F D+F+ A+ YAKSG + + VF + +K+ +SW ++ G A +G KE++ LFE
Sbjct: 485 FGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFE 544
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M I P+E+T +L AC+H G VD+GL F SM Y+IKP HY CV+++L R
Sbjct: 545 VMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRV 604
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL EA + + M + W +LL C+ + N ++A+ + + L L ++ + YVLLS
Sbjct: 605 GRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLS 664
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
N++A AGRW VR LM E K GCSW+E+ NQ+H F K
Sbjct: 665 NMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFLSKA 710
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 146/341 (42%), Gaps = 52/341 (15%)
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEE-------------------------------A 404
SI EK ++V + N I G +G++EE A
Sbjct: 7 SIGEKG-SYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANA 65
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+ELFD MP+RN VSW+++I+GYL ++ + +F+ M + +++ ++ +
Sbjct: 66 RELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKR----DIYSWTLMITCYTRI 121
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
LEK ++L L D AL YAK ++++FD M KN +SW ++
Sbjct: 122 GELEKARELFN---LLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSIL 178
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G ++G + + FE M + ++ L + + G +D +F +
Sbjct: 179 SGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGV----GDLDSAWMFFKKIPT---- 230
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
PN + ++ + GR++EA + N MP + + +W +++ Y E + A K
Sbjct: 231 -PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTK-NLVSWNAMIGA---YVRENQIDDAYK 285
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
++ E+ + + N Y G+ + A + LM K +
Sbjct: 286 LFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNI 326
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 342/650 (52%), Gaps = 53/650 (8%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT----------- 122
+A + ++ + V N MI A G + +A+ LFD MP R+ SWT
Sbjct: 60 DARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGE 119
Query: 123 ---------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQ 161
A+ISG+ KHGR ++++ P ++ISW + + G +
Sbjct: 120 LGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTR 179
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
NG A+K F ++ + V+++ + + D +F + V++
Sbjct: 180 NGEMVRAVKFFDEMPAR----DMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTL 235
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
N + G + AR +FDR+ R+V +W V+L ++ + + EA ++F EMP++N
Sbjct: 236 LNGYC----RAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNS 291
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
+SW+ MI+ + G +EA L +M SF T+ L+S M A
Sbjct: 292 ISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMH---------GYLQSKMIDDAR 342
Query: 342 VLKIGIE-KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
++ G+E +D N +I Y CG + ++F + KD+ VSWN+MI GY +GQ
Sbjct: 343 LIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDM---VSWNTMIAGYAHDGQ 399
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
M +A +F M +RN VSW+++ISG++++ F M + + ST++ L A
Sbjct: 400 MRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSA 459
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
A +A+L G+ H + + G+ D F G AL YAK G I +R+VFD MP + +SW
Sbjct: 460 CADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSW 519
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
++ G A +G+ E+I++F EME + P+E+T + VL ACSH+GL+D+G +FNSM
Sbjct: 520 NALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTK 579
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
Y ++P HY C+VD+L RSGRLSEA + I M +P++ W ++L C+ +KN ++A+
Sbjct: 580 DYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQ 639
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
A + L++L + YVLLSNI A AG+W +A N+R + E+G+ K+ G
Sbjct: 640 LAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPG 689
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 216/442 (48%), Gaps = 38/442 (8%)
Query: 35 NLVIQGRALHGH------LIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
N +I G A HG L++ + +L+ + + + A + ++ D+V
Sbjct: 140 NAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMV 199
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
N M+ ++ G+++ A LF G+P N VSW L++G+ + GR+ E+ F+R P +N
Sbjct: 200 SWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRN 259
Query: 149 VISWTAAICGFVQNGFSFEALKLFL---------------------KLLESGVKPNEVTF 187
V +W + G+++ EA KLF KL E+ +++ F
Sbjct: 260 VAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPF 319
Query: 188 SSICKACAEINDFRLG--LSVFGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDR 244
S A ++ + + LIF G E +VC N++I+ + G +D A +F +
Sbjct: 320 DSFAAKTALMHGYLQSKMIDDARLIFD-GLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQ 378
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M +D+VSW ++ + G + +A IF +M +RN VSW+ +I+ + Q+G EA + F
Sbjct: 379 MPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHF 438
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
M R + + + S ++ LSA A L AL G H+ + + G D F NALI Y+KC
Sbjct: 439 VLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKC 498
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA----KELFDNMPKRNDVSWS 420
G + R VFD + D +VSWN++I GY NG EA +E+ DN + ++V++
Sbjct: 499 GRILEARQVFDEMPAPD---IVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFV 555
Query: 421 AIISGYLEHKQFDLVFAVFNEM 442
++S D F FN M
Sbjct: 556 GVLSACSHAGLIDEGFDFFNSM 577
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 206/467 (44%), Gaps = 37/467 (7%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N +T + G++ AR +FD M R+ VS+ +L G + +ARR+FDE+P RN V
Sbjct: 15 NQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTV 74
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ MIA + G +A LF M P FS L +A G+ A +
Sbjct: 75 SWNAMIAACSDHGRVADARDLFDAM------PARDGFSWTLMVSCYARAGELGLARDA-L 127
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
++ +K NA+I Y+K G D + + D ++SWNS++ G NG+M
Sbjct: 128 DRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPD---IISWNSVLVGLTRNGEMV 184
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
A + FD MP R+ VSW+ ++ GY+ D +F + PN ++ ++L
Sbjct: 185 RAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGV----PSPNVVSWVTLLNGYC 240
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
+ + ++L +I +V + Y + +E + ++F MPDKN ISWT
Sbjct: 241 RAGRIGEARELFDRIPD----RNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTT 296
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M+ L G +E+ +L ++M S + L S ++D F+ +E
Sbjct: 297 MISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYL----QSKMIDDARLIFDGLEV-- 350
Query: 583 NIKPNGRHYTCVVDMLS---RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
R C M+S G L EA MP D +W ++++G Y ++
Sbjct: 351 ------RDAVCWNTMISGYVHCGMLDEAMVLFQQMP-NKDMVSWNTMIAG---YAHDGQM 400
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
+AV K+ + + + + + + G ++A+ LM R
Sbjct: 401 RKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKR 447
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 141/273 (51%), Gaps = 5/273 (1%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T L+ YL S+ +A I L D V N MI+ + G L+EA LF MP ++ V
Sbjct: 326 TALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMV 385
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +I+G+ G++ +++ F + +N +SW + I GFVQNG EAL+ F+ +
Sbjct: 386 SWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDA 445
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ + T++ ACA++ +G L+ ++G+ N+LI+ K G + AR
Sbjct: 446 KRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEAR 505
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSG 295
VFD M D+VSW ++D + G EA +F EM + +EV++ +++ + +G
Sbjct: 506 QVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAG 565
Query: 296 YPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
+E F F MT+ Y+ +P ++ ++ L
Sbjct: 566 LIDEGFDFFNSMTKDYALRPVAEHYACMVDLLG 598
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 72/194 (37%), Gaps = 65/194 (33%)
Query: 19 SYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI 78
S CL D+ + ++ GR H L ++G Y+G
Sbjct: 451 STYACCLSACADLAALHV---GRQFHSLLARSG--------------YIG---------- 483
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
D N +I+A + G + EA+++FD MP + VSW ALI
Sbjct: 484 -------DSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALID------------ 524
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
G+ NG EA+ +F ++ ++ V+P+EVTF + AC+
Sbjct: 525 -------------------GYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAG 565
Query: 199 DFRLGLSVFGLIFK 212
G F + K
Sbjct: 566 LIDEGFDFFNSMTK 579
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 326/590 (55%), Gaps = 66/590 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL++ + K R ++++ F+ P ++VISW + I G NG +A++LF+++ G +
Sbjct: 236 ALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEEL 295
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T S+ ACAE++ LG V G K GF S+ N
Sbjct: 296 DSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLAN------------------- 336
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
V+LD++ D +IF M ++N VSW+ MI Y ++G ++
Sbjct: 337 ------------VLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAG 384
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF++M +P+ + L A A + L+ G VH + ++ G+EK + ++NAL+++Y
Sbjct: 385 LFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYV 444
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG MEEAK +FD + ++ +SW+ +
Sbjct: 445 KCG----------------------------------NMEEAKLIFDGVVSKDMISWNTL 470
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I GY + + F++F EMLL PN T + +L A+AS++SLE+G+++H ++ G+
Sbjct: 471 IGGYSRNNLANEAFSLFTEMLLQLR-PNAVTMTCILPAAASLSSLERGREMHAYALRRGY 529
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D F+ AL D Y K G + +RR+FDR+ +KN ISWT+MV G G +++I LFE+
Sbjct: 530 LEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQ 589
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M + I P+ + ++L+ACSHSGL D+G ++F++M + I+P +HYTC+VD+L +G
Sbjct: 590 MRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTG 649
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L EA +FI+SMP EPDS+ W SLL GC+ ++N ++AE + +++L E+ YVLL+N
Sbjct: 650 NLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLAN 709
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
IYA A RW ++ + +GLR++ GCSW+E + +VH F ++P+
Sbjct: 710 IYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQ 759
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 179/390 (45%), Gaps = 50/390 (12%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVS-WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
++++ GDL ARR+FDEMP+ ++V W+ +++ Y ++G E LFR+M +P+
Sbjct: 138 MYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAY 197
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
S VL +A L ++ G VH + K+G + NAL+ Y+K TKD LVFD +
Sbjct: 198 TISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGM 257
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+D V+SWNSMI G NG ++A ELF M W
Sbjct: 258 PHRD---VISWNSMISGCTSNGLYDKAIELFVRM-------W------------------ 289
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
L GE + +T SVL A A + L G+ +HG +K GF L L D Y+
Sbjct: 290 ------LEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYS 343
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
D S+ ++F M KN +SWT M+ +G + LF+EM P+ I S
Sbjct: 344 NCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITS 403
Query: 558 VLFACSHSGLVDKGLKYF-----NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
L A + + L+ G N ME + + +++M + G + EA+ +
Sbjct: 404 ALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT------NALMEMYVKCGNMEEAKLIFD 457
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ D +W +L+ G Y +A A
Sbjct: 458 GV-VSKDMISWNTLIGG---YSRNNLANEA 483
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 177/458 (38%), Gaps = 115/458 (25%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L +L +L+ GR +HG+ +KTG + L LL MY N+I +++
Sbjct: 299 TLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM 358
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PE--------------------- 115
++V MI + + G ++ LF M P+
Sbjct: 359 VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGK 418
Query: 116 -------RNEVS-----WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
RN + AL+ ++K G +EE+ F+ +++ISW I G+ +N
Sbjct: 419 SVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNN 478
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ EA LF ++L ++PN VT + I A A ++ G + + G+ + V N
Sbjct: 479 LANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVAN 537
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+LI + +K G + LAR +FDR+ ++++SWT
Sbjct: 538 ALIDMYVKCGALLLARRLFDRLSNKNLISWT----------------------------- 568
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+M+A Y G +A LF QM P+ + FS +L A
Sbjct: 569 --IMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYAC----------------- 609
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLN 398
S G +G FD++ +E + H + M+
Sbjct: 610 ------------------SHSGLRDEGWRFFDAMRKEHKIEPRLKH---YTCMVDLLINT 648
Query: 399 GQMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDLV 435
G ++EA E D+MP D S W +++ G H+ L
Sbjct: 649 GNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLA 686
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 123/279 (44%), Gaps = 41/279 (14%)
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I R +SG EEA L S + + VL + +++L G H V +
Sbjct: 68 IQRLCRSGDLEEALGLLG-----SDGVDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSL 122
Query: 348 EKDVF---ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+D + L+ +Y KCG+ ++ R VFD + + V+ V W +++ GY G + E
Sbjct: 123 GRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQ--VSDVRVWTALMSGYAKAGDLRE- 179
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
G L +F +M G P+ T S VL A +
Sbjct: 180 --------------------GVL----------LFRKMHCCGVRPDAYTISCVLKCIAGL 209
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
S+E G+ +HG + KLGF +G AL YAKS + + VFD MP ++ ISW M+
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
G +G ++I LF M + T+LSVL AC+
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACA 308
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 17/234 (7%)
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLH--GKIIKLGFP-YDVFLGTALTDTYAKS 499
LL + + ++ +VL + V SLE GK H + LG D LG L Y K
Sbjct: 83 LLGSDGVDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKC 142
Query: 500 GDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
GD+E++RRVFD MP +++ WT ++ G A++G +E + LF +M + P+ TI V
Sbjct: 143 GDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCV 202
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD-----MLSRSGRLSEAEDFINS 613
L + G ++ G +E + G C V ++S R +A +
Sbjct: 203 LKCIAGLGSIEDGEVVHGLLEKL------GFGSQCAVGNALMAFYAKSNRTKDAILVFDG 256
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
MP D +W S++SGC + A +W EE + LLS + A A
Sbjct: 257 MPHR-DVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSA-TLLSVLPACA 308
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/635 (32%), Positives = 341/635 (53%), Gaps = 36/635 (5%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I++ L + +HN +++A + A+R+FDG+P+ N SW L+ + K G + E
Sbjct: 29 IIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEM 88
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAE 196
FE+ P ++ ++W I G+ +G A+K + +++ VT ++ K +
Sbjct: 89 ERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSS 148
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
LG + G + K GFE ++ V + L+ + K+G + A+ VF ++ R+ V + +
Sbjct: 149 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTL 208
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + G + +A ++F M E++ VSWS MI Q+G +EA FR+M K +
Sbjct: 209 MGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQ 267
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F VL A L A+ G +HA +++ ++ +++ +ALID+Y KC
Sbjct: 268 YPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCK----------- 316
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ AK +FD M ++N VSW+A++ GY + +
Sbjct: 317 -----------------------CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAV 353
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F +M SG P+ T + A A+++SLE+G HGK I G + + + +L Y
Sbjct: 354 KIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLY 413
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K GDI+ S R+F+ M ++E+SWT MV A+ G A E+I LF++M + + P+ +T+
Sbjct: 414 GKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLT 473
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
V+ ACS +GLV+KG +YF M Y I P+ HY+C++D+ SRSGR+ EA FIN MPF
Sbjct: 474 GVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPF 533
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
PD+ W +LLS C+ N +I + A ++L +L HPAGY LLS+IYAS G+W +
Sbjct: 534 RPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQL 593
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R+ M EK +RK G SW++ + ++H F + +P
Sbjct: 594 RRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSP 628
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/567 (23%), Positives = 243/567 (42%), Gaps = 110/567 (19%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL 62
A++++ ++ + S N T + +LK +S V G+ +HG +IK G + + L
Sbjct: 118 AAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 177
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
L MY +A ++ L+ + V++N ++ + G +E+A +LF GM E++ VSW+
Sbjct: 178 LDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWS 236
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A+I G QNG EA++ F ++ G+K
Sbjct: 237 AMIK-------------------------------GLAQNGMEKEAIECFREMKIEGLKM 265
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
++ F S+ AC + G + I + + H+ V ++LI + K + A++VF
Sbjct: 266 DQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVF 325
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
DRM++++VVSWT ++ + + G GEA +IF +
Sbjct: 326 DRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLD--------------------------- 358
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
M R P+ +SA A++ +L G H + G+ + +SN+L+ LY
Sbjct: 359 ----MQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYG 414
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ D +F+ E +V VSW +M+ Y G+ EA +LFD
Sbjct: 415 KCGDIDDSTRLFN---EMNVRDEVSWTAMVSAYAQFGRAVEAIQLFD------------- 458
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLG 481
+M+ G P+ T + V+ A + +EKG+ +I + G
Sbjct: 459 ------------------KMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYG 500
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRGLAESG------YAK 534
+ + D +++SG IE + + MP + + I WT ++ G +A
Sbjct: 501 IVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAA 560
Query: 535 ESINLFEEMEKTSITPNELTILSVLFA 561
ES+ +E P T+LS ++A
Sbjct: 561 ESL-----IELDPHHPAGYTLLSSIYA 582
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/674 (32%), Positives = 338/674 (50%), Gaps = 95/674 (14%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +H +IKTG+H Y ++L + C+++ +
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKL--------------------------IEFCILSPH--- 37
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
FDG+P V FE N++ W G
Sbjct: 38 ---------FDGLPYAISV---------------------FETIQEPNLLIWNTMFRGHA 67
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ ALKL++ ++ G+ PN TF + K+CA+ F+ G + G + K G + +
Sbjct: 68 LSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 127
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V SLI++ ++ G ++ A VFD RDVVS+T ++ + G + A+++FDE+P ++
Sbjct: 128 VHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKD 187
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MI+ Y ++G +EA LF+ M + + +P+ S V+SA A ++ G VH+
Sbjct: 188 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHS 247
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G ++ I NALIDLYSKCGE
Sbjct: 248 WIDDHGFGSNLKIVNALIDLYSKCGE---------------------------------- 273
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+E A LF+ +P ++ +SW+ +I GY + +F EML SGE PN T S+L A
Sbjct: 274 LETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 333
Query: 461 SASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + +++ G+ +H I K G L T+L D YAK GDIE++ +VF+ + K+
Sbjct: 334 CAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 393
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW M+ G A G A S ++F M K I P+++T + +L ACSHSG++D G F SM
Sbjct: 394 SWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 453
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
Y + P HY C++D+L SG EAE+ IN+M EPD W SLL CK + N ++
Sbjct: 454 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 513
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E +NL K+ E+P YVLLSNIYA+AGRW + N R L+ +KG++K GCS +E+ +
Sbjct: 514 GESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDS 573
Query: 699 QVHFFFQKTDHNPK 712
VH F +P+
Sbjct: 574 VVHEFIIGDKFHPR 587
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 255/594 (42%), Gaps = 135/594 (22%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T LLK +G+ +HGH++K G
Sbjct: 90 NSY--TFPFLLKSCAKSKAFKEGQQIHGHVLKLGC------------------------- 122
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
DL DL VH +I+ +Q G LE+A ++FD P R+ VS+TALI G+ G +E +
Sbjct: 123 ---DL---DLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENA 176
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F+ P ++V+SW A I G+ + G EAL+LF ++++ V+P+E T ++ ACA+
Sbjct: 177 QKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 236
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
LG V I GF ++ + N+LI L K GE++ A +F+ + +DV+SW ++
Sbjct: 237 GSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLI 296
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ M +EA LF++M R PN
Sbjct: 297 GGYTHM-------------------------------NLYKEALLLFQEMLRSGETPNDV 325
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+L A A L A+ G +H ++ K G+ + +LID+Y+KCG+ + VF+
Sbjct: 326 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFN 385
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
SI+ K ++ SWN+MI G+ ++G R D S
Sbjct: 386 SILHKSLS---SWNAMIFGFAMHG--------------RADAS----------------- 411
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F +F+ M +G P+ TF +L A + L+ G+ + ++T
Sbjct: 412 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF---------------RSMTQD 456
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y + +E + M+ L SG KE+ + ME + P+ +
Sbjct: 457 YKMTPKLE---------------HYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIW 498
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
S+L AC G V+ G + ++ I P Y + ++ + +GR +E +
Sbjct: 499 CSLLKACKMHGNVELGESFAQNLIKIEPENPGS--YVLLSNIYATAGRWNEVAN 550
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/707 (31%), Positives = 366/707 (51%), Gaps = 77/707 (10%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG +++ G+ ++ ++++ + Y EA + + D+V N + + +
Sbjct: 160 GKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVN 219
Query: 100 WGNLEEAQRLF-----DGM-PERNEVSWT-------------ALISGF-MKHGRVE---- 135
G ++ +F DG+ P+ VS I GF +KHG VE
Sbjct: 220 CGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFV 279
Query: 136 ---------------ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
E+ F+ P +NVI+W + +V GF + L +F ++ +GV
Sbjct: 280 SNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGV 339
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP+ + SSI AC+++ D + G ++ G K G + V VC +L+ L A
Sbjct: 340 KPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNL--------YANC 391
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ R EA+ +FD MP RN V+W+ + + Y G+P++
Sbjct: 392 LCVR-----------------------EAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKG 428
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+FR+M KP+ +L A + L+ L+SG +H ++ G+ +DVF+ NAL+ L
Sbjct: 429 LNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSL 488
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRND 416
Y+KC ++ ++VFD I ++VA SWN ++ Y N + E+ +F M K ++
Sbjct: 489 YAKCVCVREAQVVFDLIPHREVA---SWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADE 545
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
++WS +I G +++ + + +F +M G P+++T S+L A + L GK++H
Sbjct: 546 ITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCY 605
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+ + +D+ AL D YAK G + SR VFD MP K+ SW M+ G KE+
Sbjct: 606 VFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEA 665
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
++LFE+M + + P+ T VL ACSHS LV++G++ FNSM + ++P HYTCVVD
Sbjct: 666 LSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVD 725
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+ SR+G L EA FI MP EP + AW + L+GC+ YKN ++A+ + K L+++ A
Sbjct: 726 IYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSAN 785
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YV L NI +A W +A +RKLM E+G+ K+ GCSW V N+VH F
Sbjct: 786 YVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTF 832
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 221/478 (46%), Gaps = 96/478 (20%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ + N I+A + +E A+R+FD + R+ V+W +L + ++
Sbjct: 74 DVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVN--------------- 118
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
CGF Q G L +F K+ + VK N +T SSI C+++ D + G
Sbjct: 119 -----------CGFPQQG-----LNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKE 162
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + + G + V V ++ + K V A++VFD M RDVV+W + ++
Sbjct: 163 IHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYV---- 218
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
G+P++ +FR+M KP+ S +LSA
Sbjct: 219 ---------------------------NCGFPQKGLNVFREMVLDGVKPDPVTVSCILSA 251
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L+ L+SG +H LK G+ ++VF+SNAL++LY C ++ + VFD + ++ V
Sbjct: 252 CSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN---V 308
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
++WNS+ Y G P++ VF EM L+
Sbjct: 309 ITWNSLASCYVNCG-----------FPQKG--------------------LNVFREMGLN 337
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G P+ SS+L A + + L+ GK +HG +K G DVF+ TAL + YA + +
Sbjct: 338 GVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREA 397
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ VFD MP +N ++W + G+ ++ +N+F EM + P+ +T+LS+L ACS
Sbjct: 398 QTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACS 455
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 234/533 (43%), Gaps = 81/533 (15%)
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ +G EA+K++ G+KP++ F ++ KACA D + G V
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
S+ N+ I K V+ ARR+FD++ R
Sbjct: 76 SIGNAFIHAYGKCKCVE-------------------------------GARRVFDDLVAR 104
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+ V+W+ + A Y G+P++ +FR+M K N S +L + L+ L+SG +H
Sbjct: 105 DVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIH 164
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
V++ G+ +DVF+S+A ++ Y+KC ++ + VFD + +D VV+WNS+ Y G
Sbjct: 165 GFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRD---VVTWNSLSSCYVNCG 221
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
P++ VF EM+L G P+ T S +L
Sbjct: 222 -----------FPQKG--------------------LNVFREMVLDGVKPDPVTVSCILS 250
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A + + L+ GK +HG +K G +VF+ AL + Y + ++ VFD MP +N I+
Sbjct: 251 ACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVIT 310
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W + G+ ++ +N+F EM + P+ + + S+L ACS + G K +
Sbjct: 311 WNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG-KTIHGFA 369
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
+ + + T +V++ + + EA+ + MP + W SL S Y N
Sbjct: 370 VKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSLSS---CYVNCGFP 425
Query: 640 ERAVKNLWK---LAEEHPAGYVLLSNIYAS-------AGRWIDAMNVRKLMTE 682
++ + N+++ L P +LS ++A +G+ I VR M E
Sbjct: 426 QKGL-NVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE 477
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/632 (32%), Positives = 340/632 (53%), Gaps = 48/632 (7%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL++ + + +E++ F P + W AI +Q+ + ++LF K+ S +K
Sbjct: 173 ALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKA 232
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
T + +AC ++ + G +F+ G + VS+CN LI++ K G+++LAR VF
Sbjct: 233 ETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVF 292
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE----VSWSVMIARYNQSGYPE 298
D ME R+ SW ++ + +G L +A +F E+ + V+W+ +++ + GY E
Sbjct: 293 DSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 352
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
E + ++M FKPN+S + VL A++ L L G H +VL+ G + DV++ +LI
Sbjct: 353 EVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI 412
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR---- 414
D+Y K + VFD++ +++ +WNS++ GY G E+A L + M K
Sbjct: 413 DMYVKNHSLTSAQAVFDNMKNRNI---FAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP 469
Query: 415 -----------------------------------NDVSWSAIISGYLEHKQFDLVFAVF 439
N VSW+A+ISG + F
Sbjct: 470 DLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFF 529
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+M G +PN ++ + +L A AS++ L+KGK++H I+ GF DVF+ TAL D Y+KS
Sbjct: 530 AQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKS 589
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
++++ +VF R+ +K SW M+ G A G KE+I++F EM+K + P+ +T ++L
Sbjct: 590 SSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALL 649
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
AC +SGL+ +G KYF+SM Y I P HY C+VD+L R+G L EA D I++MP +PD
Sbjct: 650 SACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPD 709
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ W +LL C+ +KN + AE A KNL+KL + A Y+L+ N+Y+ RW D ++R+L
Sbjct: 710 ATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLREL 769
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
M G+R SW+++ +VH F +D P
Sbjct: 770 MGAAGVRNRQVWSWIQINQRVHVF--SSDEKP 799
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/534 (26%), Positives = 248/534 (46%), Gaps = 47/534 (8%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE-ALKLFLKLLESGVKP 182
LIS ++ G + F +N + W + + F + S L++F +L GV
Sbjct: 72 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 131
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +S K C + D LG+ + G + K GF+
Sbjct: 132 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFD-------------------------- 165
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
DV +++ + L +A ++F EMP + W+ I QS ++
Sbjct: 166 -----LDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVE 220
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR+M K T+ VL A + AL + +H +V + G++ DV + N LI +YS
Sbjct: 221 LFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYS 280
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVS 418
K G+ + R VFDS+ ++ + SWNSMI Y G + +A LF + K + V+
Sbjct: 281 KNGKLELARRVFDSMENRNTS---SWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 337
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+ ++SG+ H + V + M G PN S+ +SVL A + + L GK+ HG ++
Sbjct: 338 WNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVL 397
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ GF DV++GT+L D Y K+ + S++ VFD M ++N +W +V G + G ++++
Sbjct: 398 RNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALR 457
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
L +MEK I P+ +T ++ + G + L + + + + PN +T ++
Sbjct: 458 LLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSL-GLTPNVVSWTALISGS 516
Query: 599 SRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTY----KNEQIAERAVKN 645
S++G ++ F M E P+S + LL C + K ++I +++N
Sbjct: 517 SQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRN 570
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 193/387 (49%), Gaps = 50/387 (12%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE--SMWY-FE 142
D+ + N +I+ + G LE A+R+FD M RN SW ++IS + G + + S++Y E
Sbjct: 268 DVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELE 327
Query: 143 RNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ + ++++W + G +G+ E L + ++ G KPN + +S+ +A +E+
Sbjct: 328 SSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLN 387
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G G + + GF+ V V SLI + +K + A++VFD M+ R++ +W ++ +
Sbjct: 388 MGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYS 447
Query: 262 EMGDLGEARRIFDEMPER---------------------------------------NEV 282
G +A R+ ++M + N V
Sbjct: 448 FKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVV 507
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ +I+ +Q+G ++ + F QM + PN++ + +L A ASL L+ G +H
Sbjct: 508 SWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLS 567
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
++ G +DVF++ ALID+YSK K+ VF I K +A SWN MI G+ + G +
Sbjct: 568 IRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLA---SWNCMIMGFAIFGLGK 624
Query: 403 EAKELFDNMPK----RNDVSWSAIISG 425
EA +F+ M K + ++++A++S
Sbjct: 625 EAISVFNEMQKVGVGPDAITFTALLSA 651
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 214/495 (43%), Gaps = 50/495 (10%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ I+ + G+ HG++++ G + Y+ T L+ MY+ + A + ++ +
Sbjct: 376 VLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRN 435
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFE 142
+ N +++ G E+A RL + M + + V+W +ISG+ G +E++
Sbjct: 436 IFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLH 495
Query: 143 RNP----FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
+ NV+SWTA I G Q G + ++LK F ++ + GV PN + + + +ACA ++
Sbjct: 496 QTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLS 555
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+ G + L + GF + V V +LI + K + A VF R++ + + SW ++
Sbjct: 556 LLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIM 615
Query: 259 VFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFK 313
F G EA +F+EM + + ++++ +++ SG E ++ F M T Y
Sbjct: 616 GFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIV 675
Query: 314 PNTSCFSIVLSALASLKALRSGMH-VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
P + ++ L L +H LK D I AL+ C K+ L
Sbjct: 676 PRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK----PDATIWGALL---GSCRIHKN--L 726
Query: 373 VFDSIVEKDVAHVVSWNS-----MIGGYGLNGQ---MEEAKELFDNMPKRNDVSWSAIIS 424
F K++ + NS M+ Y + + M+ +EL RN WS I
Sbjct: 727 KFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQI 786
Query: 425 GYLEH-------------KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
H K + ++ + +EM G +P+ V C ++ +EK K
Sbjct: 787 NQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPD------VNCVYQNMDEVEKQK 840
Query: 472 DLHGKIIKLGFPYDV 486
L KL Y +
Sbjct: 841 ILLSHTEKLAITYGL 855
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK-QFDLVFAVFNEMLLSGEI 448
++I Y G A +F RN + W++ + + +V VF E+ G +
Sbjct: 71 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 130
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ +S L V + G ++HG +IK GF DV+L AL + Y + +E + +V
Sbjct: 131 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 190
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F MP+ + W + +S ++ + LF +M+ + + TI+ VL AC G +
Sbjct: 191 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 250
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ K + + + + ++ M S++G+L A +SM ++++W S++S
Sbjct: 251 NAA-KQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWNSMIS 308
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 317/591 (53%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TA + + K G + ++ F P ++ + A I G V+N FEAL+ F LL+SG+
Sbjct: 316 TATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLG 375
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
NE++ S ACA I G + L K+ ++ V NS
Sbjct: 376 FNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANS----------------- 418
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
ILD++ + L EA +FDEM R+ VSW+ +IA + Q+G EE
Sbjct: 419 --------------ILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETL 464
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF M R +P+ + VL A +S +AL SGM +H ++K G+ D F+ ALID+Y
Sbjct: 465 NLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMY 524
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG +EEAK++ D + ++ VSW+A
Sbjct: 525 CKCG----------------------------------MIEEAKKIHDRIEQQTMVSWNA 550
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
II+G+ K + + F EML P+ T++ VL A A++AS+ GK +HG+IIKL
Sbjct: 551 IIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLE 610
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV++ + L D Y+K G+++ S VF++ P+K+ ++W M+ G A+ G +E++ FE
Sbjct: 611 LHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFE 670
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M+ ++ PN T +S+L AC+H G +DKGL YFN+M Y ++P HY+C++D++ RS
Sbjct: 671 RMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRS 730
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GR+SEA I MPFE D+ W +LLS CK + N +IAE+A + +L E + +LLS
Sbjct: 731 GRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLS 790
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYA AG W +RK+M L+K GCSW+EV+++VH F +P+
Sbjct: 791 NIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPR 841
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 245/530 (46%), Gaps = 74/530 (13%)
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
++ V+ +AL+ + K R+++S+ F P +N + W+A I G VQN L+LF ++
Sbjct: 209 KDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEM 268
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
+ G+ ++ ++S+ ++CA ++ ++G + K F
Sbjct: 269 QKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDF-------------------- 308
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI--ARYNQ 293
D+ T LD++ + G L +A+RIF+ +P+ + ++ +I N+
Sbjct: 309 -----------GSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNE 357
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G+ EA + F+ + + N S SA AS+K G +H+ +K + ++ +
Sbjct: 358 KGF--EALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICV 415
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+N+++D+Y KC + EA +FD M +
Sbjct: 416 ANSILDMYGKCE----------------------------------ALSEACCMFDEMER 441
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
R+ VSW+A+I+ + ++ + +F ML P++ T+ SVL A +S +L G ++
Sbjct: 442 RDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEI 501
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H +IIK G D F+G AL D Y K G IE ++++ DR+ + +SW ++ G ++
Sbjct: 502 HNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHS 561
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+++ + F EM K S+ P+ T VL AC++ V G + + + + + +
Sbjct: 562 EDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKL-ELHSDVYITST 620
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+VDM S+ G + ++ P D W +++ G Y + E A+
Sbjct: 621 LVDMYSKCGNMQDSALVFEKAP-NKDFVTWNAMICG---YAQHGLGEEAL 666
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 167/410 (40%), Gaps = 75/410 (18%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ GR LH +K+ + + +L MY EA + ++ D V N +I A+
Sbjct: 395 LDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAH 454
Query: 98 IQWGNLEEAQRLF-----------------------------DGMPERNEVSWT------ 122
Q GN EE LF GM N + +
Sbjct: 455 EQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDS 514
Query: 123 ----ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
ALI + K G +EE+ +R Q ++SW A I GF S +A F ++L+
Sbjct: 515 FVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKM 574
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
VKP+ T++ + ACA + LG + G I K V + ++L+ + K G + +
Sbjct: 575 SVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDS 634
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VF++ +D V+W + MI Y Q G E
Sbjct: 635 ALVFEKAPNKDFVTW-------------------------------NAMICGYAQHGLGE 663
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH-VHAHVLKIGIEKDVFISNAL 357
EA F +M + +PN + F +L A A + + G+H +A + + G+E + + +
Sbjct: 664 EALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCM 723
Query: 358 IDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
ID+ + G + +L+ + E D V W +++ ++G +E A++
Sbjct: 724 IDIIGRSGRISEALKLIQEMPFEAD---AVIWRTLLSICKIHGNIEIAEK 770
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/602 (33%), Positives = 325/602 (53%), Gaps = 44/602 (7%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L++ + K +E++ FE P +V SWT I GF + G S + L LF K+ + GV PN
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386
Query: 184 EVTFSSICKACAE-INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T S + K+C+ +ND R+G + G I + G + + NS++ +K A +F
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLF 446
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
M ++D VSW +++ ++++GD+ ++ +F ++P ++ SW+ MI ++G A
Sbjct: 447 GLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALE 506
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L +M N FSI L +SL L G +H VLK+G+ D F+ N+LID+Y
Sbjct: 507 LLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYC 566
Query: 363 KCGETKDGRLVFDSIVEKD------------VAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
KCGE + ++F + ++ V VSW+SM+ GY NG+ E+A
Sbjct: 567 KCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDA------ 620
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
F+ M+ S +K T +SV+ A AS LE G
Sbjct: 621 -------------------------LKTFSFMICSQVEVDKFTLTSVVSACASAGVLELG 655
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ +HG I K+G DVFLG+++ D Y K G + + +F++ D+N + WT M+ G A
Sbjct: 656 RQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALH 715
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G +E++ LFE M ITPNE++ + VL ACSH+GL+++G KYF M +Y I+P H
Sbjct: 716 GQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEH 775
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
+TC+VD+ R+GRL+E ++FI++ S+ W S LS C+ +KN ++ K L +L
Sbjct: 776 FTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELE 835
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
Y+L S+I A+ RW +A +R LM ++G++K+ SW++++NQVH F +
Sbjct: 836 PFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSH 895
Query: 711 PK 712
P+
Sbjct: 896 PQ 897
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 202/429 (47%), Gaps = 65/429 (15%)
Query: 83 NGFDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NG DL V++N +++ ++ A++LF M E++ VSW ++S +++ G +++S+
Sbjct: 417 NGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDL 476
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F + P ++ SW I G ++NG AL+L K++ +G N++TFS + ++
Sbjct: 477 FRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVL 536
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG + + K G V NSLI + K GE++ A +F + +
Sbjct: 537 GLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQ------------- 583
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
E + D + E VSWS M++ Y Q+G E+A + F M + + +
Sbjct: 584 -ESSMMNSEESCDDAVVE--SVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLT 640
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+SA AS L G VH ++ KIG DVF+ +++ID+Y KCG D L+F+ ++
Sbjct: 641 SVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDR 700
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ VV W SMI G L+GQ EA LF+ M N
Sbjct: 701 N---VVLWTSMISGCALHGQGREAVRLFELM---------------------------IN 730
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKG-------KDLHGKIIKLGFPYDVFLGTALT 493
E G PN+ +F VL A + LE+G ++++G I+ G + T +
Sbjct: 731 E----GITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYG--IRPGAEHF----TCMV 780
Query: 494 DTYAKSGDI 502
D Y ++G +
Sbjct: 781 DLYGRAGRL 789
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 37/214 (17%)
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
LH K+IK G G L + YAKS ++E + ++F+ +P + SWTV++ G A G
Sbjct: 310 LHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACS------------HSGLVDKGL-------- 572
+ + + LF +M+ + PN+ T+ VL +CS H ++ GL
Sbjct: 368 SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427
Query: 573 ---------KYFNSMEPIYNIKPNGRHYTCVVDMLS--RSGRLSEAEDFINSMPFEPDSN 621
+ F E ++ + + + M S + G + ++ D +P + D+
Sbjct: 428 SILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGK-DAA 486
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
+W +++ G E++ A++ L+K+ PA
Sbjct: 487 SWNTMIDGLMRNGCERV---ALELLYKMVAAGPA 517
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 62/171 (36%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +HG++ K G +G D+ + + +I+ ++
Sbjct: 655 GRQVHGYIQKIG-------------------------------HGLDVFLGSSIIDMYVK 683
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+L +A +F+ +RN V WT++ISG HG+
Sbjct: 684 CGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGR------------------------ 719
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
EA++LF ++ G+ PNEV+F + AC+ G F L+
Sbjct: 720 -------EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLM 763
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/706 (33%), Positives = 365/706 (51%), Gaps = 67/706 (9%)
Query: 58 LTTRLLIMYLG-SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
T L I LG S + EA + + ++V +N MI+A + G + A+ LFD MP+R
Sbjct: 16 FTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQR 75
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWT----------------------- 153
N VSW ++I+G++ + VE++ F+R +++ SWT
Sbjct: 76 NLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLP 135
Query: 154 ---------AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
A I G+ + EA KLF ++L V V+++SI + +LGL
Sbjct: 136 DKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNV----VSWNSILSGYTKNGKMQLGL 191
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
F+A E++V N ++ + +G++D A F ++ +VVSW +L F G
Sbjct: 192 Q----FFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYG 247
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ EAR +F+EMP +N VSW+ MI Y + ++A++LF +M T+ + +
Sbjct: 248 RMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVR 307
Query: 325 ALASLKA----------------------LRSGMHVHAHVLKIGIE-KDVFISNALIDLY 361
L+A L+SG A+ + I +D N++I Y
Sbjct: 308 VGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGY 367
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+ CG T + +F +V KD+ VSWN+MI Y GQM++A E+F+ M +RN VSW++
Sbjct: 368 AHCGRTDEALRLFQEMVCKDM---VSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNS 424
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY+++ + F M GE P+++T L ASA++A+L G LH IK G
Sbjct: 425 LITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTG 484
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F D+F+ A+ YAKSG + + VF + K+ +SW ++ G A +G KE++ LFE
Sbjct: 485 FGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFE 544
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M I P+E+T +L AC+H G VD+GL F SM Y+IKP HY CV+++L R
Sbjct: 545 VMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRV 604
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL EA + + M + W +LL C+ + N ++A+ + + L L ++ + YVLLS
Sbjct: 605 GRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLS 664
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
N++A AGRW VR LM E K GCSW+E+ NQ+H F K
Sbjct: 665 NMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFLSKA 710
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 146/341 (42%), Gaps = 52/341 (15%)
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEE-------------------------------A 404
SI EK ++V + N I G +G++EE A
Sbjct: 7 SIGEKG-SYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANA 65
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+ELFD MP+RN VSW+++I+GYL ++ + +F+ M + +++ ++ +
Sbjct: 66 RELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKR----DIYSWTLMITCYTRI 121
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
LEK ++L L D AL YAK ++++FD M KN +SW ++
Sbjct: 122 GELEKARELFN---LLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSIL 178
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G ++G + + FE M + ++ L + + G +D +F +
Sbjct: 179 SGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGV----GDLDSAWMFFKKIPT---- 230
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
PN + ++ + GR++EA + N MP + + +W +++ Y E + A K
Sbjct: 231 -PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTK-NLVSWNAMIGA---YVRENQIDDAYK 285
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
++ E+ + + N Y G+ + A + LM K +
Sbjct: 286 LFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNI 326
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 341/637 (53%), Gaps = 48/637 (7%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
++ C N++ G AQ + +G+ + E + L+ + + G VE++ F++ +
Sbjct: 16 ILQKCRKLYNLRLGFQVHAQLVVNGV-DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 74
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV SWTA + + G E +KLF ++ GV+P+ F + KAC+E+ ++R+G V+
Sbjct: 75 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 134
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+ GFE + V S ILD+FI+ G +
Sbjct: 135 DYMLSIGFEGNSCVKGS-------------------------------ILDMFIKCGRMD 163
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
ARR F+E+ ++ W++M++ Y G ++A +FR+M KPN+ + +SA
Sbjct: 164 IARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACT 223
Query: 328 SLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+L LR G +H + +K+ ++ D+ + N+L+D Y+KC + R F I + D+ V
Sbjct: 224 NLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL---V 280
Query: 387 SWNSMIG--GYGLNGQMEEAKELFDNM----------PKRNDVSWSAIISGYLEHKQFDL 434
SWN+M+ G+ G + A E F M R+ V W++IIS + +
Sbjct: 281 SWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVN 340
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+ EM LS N T S L A + +A+L +GK++H II+ G F+ +L D
Sbjct: 341 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 400
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y + G I+ SRR+FD MP ++ +SW VM+ G+ +++NLF++ + PN +T
Sbjct: 401 MYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHIT 460
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
++L ACSHSGL+++G KYF M+ Y + P Y C+VD+LSR+G+ +E +FI M
Sbjct: 461 FTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM 520
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
PFEP++ W SLL C+ + N +AE A + L++L + YVL++NIY++AGRW DA
Sbjct: 521 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAA 580
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+R LM E+G+ K GCSW+EV+ ++H F +P
Sbjct: 581 KIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHP 617
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 182/417 (43%), Gaps = 77/417 (18%)
Query: 182 PNEVT--FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
P+E ++SI + C ++ + RLG V + G + + + L+ + + G V+ AR
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+FD+M +R+V SWT I++++ +GD EE
Sbjct: 66 RMFDKMSERNVFSWTAIMEMYCGLGDY-------------------------------EE 94
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
+LF M +P+ F V A + LK R G V+ ++L IG E + + +++D
Sbjct: 95 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILD 154
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
++ KCG R F+ I KD V WN M+ GY G+ ++A
Sbjct: 155 MFIKCGRMDIARRFFEEIEFKD---VFMWNIMVSGYTSKGEFKKA--------------- 196
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
VF +M+L G PN T +S + A +++ L G+++HG IK
Sbjct: 197 ----------------LNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 240
Query: 480 L-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM--VRGLAESGYAKES 536
+ D+ +G +L D YAK +E +RR F + + +SW M V G + G K +
Sbjct: 241 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAA 300
Query: 537 INLFEEMEKTSITPNELTIL------SVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ F+ M +EL+ S++ AC+ SG L M + N++ N
Sbjct: 301 LEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN-LSNVEVN 356
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 153/313 (48%), Gaps = 47/313 (15%)
Query: 32 TSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHN 91
T+ +L+ GR +HG+ IK V++L+ DL+V N
Sbjct: 223 TNLSLLRHGREIHGYCIK-----------------------------VEELDS-DLLVGN 252
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTAL--ISGFMKHGRVEESMWYFERNPF--- 146
+++ + ++E A+R F + + + VSW A+ ++GF ++G + ++ +F+R
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312
Query: 147 -------QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
++V+ W + I Q+G S AL L ++ S V+ N VT S AC+++
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
R G + I + G + + NSLI + + G + +R +FD M +RD+VSW V++ V
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432
Query: 260 FIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKP 314
+ G +A +F + + N ++++ +++ + SG EE ++ F+ M T Y+ P
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 492
Query: 315 NTSCFSIVLSALA 327
++ ++ L+
Sbjct: 493 AVEQYACMVDLLS 505
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 2/176 (1%)
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
++S+L + +L G +H +++ G FLG+ L + Y ++G +E +RR+FD+M
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++N SWT ++ G +E+I LF M + P+ V ACS G
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ M I + N ++DM + GR+ A F + F+ D W ++SG
Sbjct: 133 VYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSG 186
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/729 (31%), Positives = 353/729 (48%), Gaps = 104/729 (14%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L +L ++ + G +H H+ + G + + L+ MY A E+ +
Sbjct: 387 TYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTM 446
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PER-----------NEVSWT--- 122
DL+ N +I + + EA +L+ M P R N +++
Sbjct: 447 PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506
Query: 123 -------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
AL++ + + G + E+ FE +++ISW + I G Q+G
Sbjct: 507 MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
A KLFL++ + G++P+++TF+S+ C LG + LI ++G + V++ N
Sbjct: 567 SYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGN 626
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+LI + +I G L +A +F + RN +S
Sbjct: 627 ALINM-------------------------------YIRCGSLQDAYEVFHSLRHRNVMS 655
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W+ MI + G +AF LF QM FKP S FS +L A S L G V AH+L
Sbjct: 656 WTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHIL 715
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
G E D + NALI YSK +G M +
Sbjct: 716 NSGYELDTGVGNALISAYSK----------------------------------SGSMTD 741
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A+++FD MP R+ +SW+ +I+GY ++ +M G + NK +F S+L A +S
Sbjct: 742 ARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSS 801
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
++LE+GK +H +I+K DV +G AL YAK G +E ++ VFD +KN ++W M
Sbjct: 802 FSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAM 861
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ A+ G A ++++ F M+K I P+ T S+L AC+HSGLV +G + F+S+E +
Sbjct: 862 INAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHG 921
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ P HY C+V +L R+GR EAE IN MPF PD+ W +LL C+ + N +AE A
Sbjct: 922 LSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAA 981
Query: 644 KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
N KL +PA YVLLSN+YA+AGRW D +R++M +G+RK G SW+EV N +H F
Sbjct: 982 NNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEF 1041
Query: 704 FQKTDHNPK 712
+P+
Sbjct: 1042 IAADRSHPE 1050
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 164/658 (24%), Positives = 285/658 (43%), Gaps = 121/658 (18%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H +I+ G ++ + LL MY A ++ + D+V +N M+ Q
Sbjct: 202 GKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ 261
Query: 100 WGNLEEAQRLF-----DGMPERNEVSW--------------------------------- 121
+EE LF +G+P ++V++
Sbjct: 262 KAYVEECIGLFGQMSSEGIPP-DKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIR 320
Query: 122 --TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
TAL + F++ G V + E ++V+ + A I Q+G EA + + ++ G
Sbjct: 321 VGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDG 380
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V N T+ S+ AC+ G + I + G V + NSLI++ + G++ AR
Sbjct: 381 VVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAR 440
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+F+ M KRD++SW I+ + D G E
Sbjct: 441 ELFNTMPKRDLISWNAIIAGYARREDRG-------------------------------E 469
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A +L++QM KP F +LSA + A G +H +L+ GI+ + ++NAL++
Sbjct: 470 AMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMN 529
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y +CG + + VF+ +D ++SWNSMI G+ +G E A +LF M K
Sbjct: 530 MYRRCGSIMEAQNVFEGTRARD---IISWNSMIAGHAQHGSYEAAYKLFLEMKKE----- 581
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
G P+K TF+SVL + +LE G+ +H II+
Sbjct: 582 --------------------------GLEPDKITFASVLVGCKNPEALELGRQIHMLIIE 615
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
G DV LG AL + Y + G ++ + VF + +N +SWT M+ G A+ G +++ L
Sbjct: 616 SGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFEL 675
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-----TCV 594
F +M+ P + T S+L AC S +D+G K I +I +G +
Sbjct: 676 FWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKV------IAHILNSGYELDTGVGNAL 729
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
+ S+SG +++A + MP D +W +++G Y + A++ +++ E+
Sbjct: 730 ISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAG---YAQNGLGGTALQFAYQMQEQ 783
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 232/506 (45%), Gaps = 67/506 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI+ ++K V ++ F + P ++VISW + I + Q GF +A +LF ++ +G P+
Sbjct: 123 LINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS 182
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++T+ SI AC + G + I +AG+++ V NSL+ + K ++ AR VF
Sbjct: 183 KITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFS 242
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ +RDVVS+ +L + Y Q Y EE L
Sbjct: 243 GIYRRDVVSYNTMLGL-------------------------------YAQKAYVEECIGL 271
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F QM+ P+ + +L A + L G +H + G+ D+ + AL ++ +
Sbjct: 272 FGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVR 331
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ + ++ ++D VV +N++I +G EEA
Sbjct: 332 CGDVAGAKQALEAFADRD---VVVYNALIAALAQHGHYEEA------------------- 369
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
F + +M G + N++T+ SVL A ++ +L G+ +H I ++G
Sbjct: 370 ------------FEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHS 417
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
DV +G +L YA+ GD+ +R +F+ MP ++ ISW ++ G A E++ L+++M
Sbjct: 418 SDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQM 477
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + P +T L +L AC++S G K + IK NG +++M R G
Sbjct: 478 QSEGVKPGRVTFLHLLSACTNSSAYSDG-KMIHEDILRSGIKSNGHLANALMNMYRRCGS 536
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSG 629
+ EA++ D +W S+++G
Sbjct: 537 IMEAQNVFEGTRAR-DIISWNSMIAG 561
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 198/450 (44%), Gaps = 67/450 (14%)
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ N + + + C + + +AG + + N LI + +K V A
Sbjct: 78 TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
VF +M +RDV+SW ++ + Q G+ ++
Sbjct: 138 QVFLKMPRRDVISWNSLISCYA-------------------------------QQGFKKK 166
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
AF+LF +M F P+ + +L+A S L G +H+ +++ G ++D + N+L++
Sbjct: 167 AFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLN 226
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y KC + R VF I +D VVS+N+M+G Y +EE
Sbjct: 227 MYGKCEDLPSARQVFSGIYRRD---VVSYNTMLGLYAQKAYVEE---------------- 267
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+F +M G P+K T+ ++L A + + L++GK +H +
Sbjct: 268 ---------------CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVN 312
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
G D+ +GTAL + + GD+ +++ + D++ + + ++ LA+ G+ +E+
Sbjct: 313 EGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQ 372
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
+ +M + N T LSVL ACS S + G + + + + + + ++ M +
Sbjct: 373 YYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH-SSDVQIGNSLISMYA 431
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
R G L A + N+MP + D +W ++++G
Sbjct: 432 RCGDLPRARELFNTMP-KRDLISWNAIIAG 460
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 150/307 (48%), Gaps = 38/307 (12%)
Query: 310 YSFKP---NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
Y +P N + + ++ ++L +HA +++ G+ D+F+SN LI++Y KC
Sbjct: 73 YQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRS 132
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
D A ++F MP+R+ +SW+++IS Y
Sbjct: 133 VSD----------------------------------AHQVFLKMPRRDVISWNSLISCY 158
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+ F +F EM +G IP+K T+ S+L A S A LE GK +H KII+ G+ D
Sbjct: 159 AQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDP 218
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ +L + Y K D+ S+R+VF + ++ +S+ M+ A+ Y +E I LF +M
Sbjct: 219 RVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSE 278
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I P+++T +++L A + ++D+G K + + + + R T + M R G ++
Sbjct: 279 GIPPDKVTYINLLDAFTTPSMLDEG-KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAG 337
Query: 607 AEDFINS 613
A+ + +
Sbjct: 338 AKQALEA 344
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 157/403 (38%), Gaps = 103/403 (25%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+++F+S ++ C+ S + +G+ + H++ +G
Sbjct: 688 KSTFSSILKACM-------SSACLDEGKKVIAHILNSGYE-------------------- 720
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
D V N +I+A + G++ +A+++FD MP R+ +SW +I+
Sbjct: 721 -----------LDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIA------- 762
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
G+ QNG AL+ ++ E GV N+ +F SI A
Sbjct: 763 ------------------------GYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNA 798
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C+ + G V I K + V V +LI++ K G ++ A+ VFD +++VV+W
Sbjct: 799 CSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTW 858
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+ MI Y Q G +A F M + K
Sbjct: 859 -------------------------------NAMINAYAQHGLASKALDFFNCMDKEGIK 887
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHV-LKIGIEKDVFISNALIDLYSKCGETKDGRL 372
P+ S F+ +LSA + G + + + + G+ + L+ L + G ++
Sbjct: 888 PDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAET 947
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+ + + A V W +++G ++G + A+ +N K N
Sbjct: 948 LINQMPFPPDAAV--WETLLGACRIHGNVALAEHAANNALKLN 988
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 111/241 (46%), Gaps = 11/241 (4%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
N++ + ++ SL + K +H ++++ G D+FL L + Y K + + +VF
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+MP ++ ISW ++ A+ G+ K++ LFEEM+ P+++T +S+L AC ++
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 570 KGLKYFNS-MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
G K + +E Y P R +++M + L A + + + D ++ ++L
Sbjct: 201 YGKKIHSKIIEAGYQRDP--RVQNSLLNMYGKCEDLPSARQVFSGI-YRRDVVSYNTMLG 257
Query: 629 GCKTYKNEQIAERAVKNLWKLAEE----HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
Y + E + +++ E Y+ L + + + + + KL +G
Sbjct: 258 ---LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEG 314
Query: 685 L 685
L
Sbjct: 315 L 315
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/566 (35%), Positives = 313/566 (55%), Gaps = 40/566 (7%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+P NV W + I NG EAL L+ + ++P+ TF S+ ACA + DF +
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
S+ + GF + + N+LI + + ++D AR VF+ M RDVV
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVV------------ 182
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY------SFKPNTS 317
SW+ +I+ YN +GY EA ++ Q + FKP+
Sbjct: 183 -------------------SWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLL 223
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ +L A L L G +VH +++ G E D SN LI++Y+KCG + VF +
Sbjct: 224 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM 283
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
KD VSWNSMI Y NG+M ++ ++F+NM R+ ++W+ II+ + + +L
Sbjct: 284 KCKD---SVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLR 340
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+ + M G P+ +T S+L + +A+ +GK++HG I KLG DV +G L + Y+
Sbjct: 341 MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYS 400
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G + +S +VF M K+ ++WT ++ G K+++ F EME I P+ + ++
Sbjct: 401 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 460
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
++FACSHSGLV++GL YF+ M+ Y I+P HY CVVD+LSRS L +AEDFI SMP +
Sbjct: 461 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 520
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
PDS+ W +LLS C+ + +IAER + + +L + YVL+SNIYA+ G+W ++R
Sbjct: 521 PDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIR 580
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFF 703
K + +GL+K GCSW+E++N+V+ F
Sbjct: 581 KSIKARGLKKDPGCSWMEIQNKVYVF 606
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 218/438 (49%), Gaps = 36/438 (8%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G DL + N +I+ ++ +L++A+++F+ MP R+ VSW +LISG+ +G E++ +
Sbjct: 147 GSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY-- 204
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
++++KLF++++ KP+ +T +SI +AC + D G
Sbjct: 205 ----------------------YQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFG 241
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V + +G+E + N LI + K G + ++ VF M+ +D VSW +++V+I+
Sbjct: 242 KYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQN 301
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G +G++ ++F+ M R+ ++W+ +IA S R+ +M P+ + +L
Sbjct: 302 GKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 361
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ L A R G +H + K+G+E DV + N LI++YSKCG ++ VF + KD
Sbjct: 362 PVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKD-- 419
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVF 439
VV+W ++I G+ G+ ++A F M + V++ AII + F
Sbjct: 420 -VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYF 478
Query: 440 NEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ M +I P ++ V+ + A L+K +D I+ + D + AL
Sbjct: 479 HRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF---ILSMPLKPDSSIWGALLSACRM 535
Query: 499 SGDIESSRRVFDRMPDKN 516
SGD E + RV +R+ + N
Sbjct: 536 SGDTEIAERVSERIIELN 553
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 174/379 (45%), Gaps = 32/379 (8%)
Query: 28 LKDITSQNLVIQGRALHGH---------------LIKTGIHKERYLTTRLLIMYLGSRKS 72
L+D+ S N +I G +G+ + K LT ++ G
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGD 237
Query: 73 LEANEIVKDL---NGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
LE + V D +G+ D N +IN + GNL +Q +F GM ++ VSW ++I+
Sbjct: 238 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 297
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
++++G++ +S+ FE +++I+W I V + L++ ++ GV P+ T
Sbjct: 298 YIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATM 357
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
SI C+ + R G + G IFK G E V V N LI + K G + + VF M+
Sbjct: 358 LSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT 417
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRL 303
+DVV+WT ++ G+ +A R F EM + V++ +I + SG EE
Sbjct: 418 KDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNY 477
Query: 304 FRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDL 360
F +M + Y +P ++ V+ L+ RS + A +L + ++ D I AL+
Sbjct: 478 FHRMKKDYKIEPRIEHYACVVDLLS-----RSALLDKAEDFILSMPLKPDSSIWGALLSA 532
Query: 361 YSKCGETKDGRLVFDSIVE 379
G+T+ V + I+E
Sbjct: 533 CRMSGDTEIAERVSERIIE 551
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 29/242 (11%)
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
E ++ FSS+ A AS A+ + LH II LG + V L YA D SS
Sbjct: 9 ECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSF 68
Query: 507 RVFDRM-PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS-- 563
VF P N W ++R L +G E+++L+ E ++ + P+ T SV+ AC+
Sbjct: 69 SVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGL 128
Query: 564 ---------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
H ++D G F S I N ++DM R L +A M
Sbjct: 129 LDFEMAKSIHDRVLDMG---FGSDLYIGN---------ALIDMYCRFNDLDKARKVFEEM 176
Query: 615 PFEPDSNAWASLLSG--CKTYKNE--QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
P D +W SL+SG Y NE +I +++K ++ + + +++I + G
Sbjct: 177 PLR-DVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHL 235
Query: 671 ID 672
D
Sbjct: 236 GD 237
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 325/573 (56%), Gaps = 49/573 (8%)
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V++W + I F +AL F+++ SG P+ F S+ K+C + D R G SV G
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 209 LIFKAGFEKHVSVCNSLITLSLK---MGEVDLARSVFDRMEKR-------DVVSWTVILD 258
I + G + + N+L+ + K MG +VFD M +R DV + T I+
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
I+ RR+F+ MP ++ VS++ +IA Y QSG E+A R+ R+M KP++
Sbjct: 190 FGID-----SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
S VL + + G +H +V++ GI+ DV+I ++L+D+Y+K
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK--------------- 289
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+ ++E+++ +F + R+ +SW+++++GY+++ +++ +
Sbjct: 290 -------------------SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRL 330
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F +M+ + P FSSV+ A A +A+L GK LHG +++ GF ++F+ +AL D Y+K
Sbjct: 331 FRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK 390
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G+I+++R++FDRM +E+SWT ++ G A G+ E+++LFEEM++ + PN++ ++V
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSH GLVD+ YFNSM +Y + HY V D+L R+G+L EA +FI+ M EP
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
+ W++LLS C +KN ++AE+ + ++ + E+ YVL+ N+YAS GRW + +R
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRL 570
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
M +KGLRK CSW+E++N+ H F +P
Sbjct: 571 RMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHP 603
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 188/410 (45%), Gaps = 70/410 (17%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G ++HG +++ G+ + Y L+ MY L G + + I
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMY-------------AKLLG---------MGSKIS 161
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISG---FMKHGRVEESMWYFERNPFQNVISWTAAI 156
GN+ FD MP+R S + M G ++ FE P ++V+S+ I
Sbjct: 162 VGNV------FDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTII 214
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+ Q+G +AL++ ++ + +KP+ T SS+ +E D G + G + + G +
Sbjct: 215 AGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID 274
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
V + +SL+ + K ++ + VF R+ RD +SW ++ +++ G
Sbjct: 275 SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG------------ 322
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
RYN EA RLFRQM KP FS V+ A A L L G
Sbjct: 323 -------------RYN------EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H +VL+ G ++FI++AL+D+YSKCG K R +FD + +V VSW ++I G+
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM---NVLDEVSWTAIIMGHA 420
Query: 397 LNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
L+G EA LF+ M ++ N V++ A+++ D + FN M
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 192/394 (48%), Gaps = 12/394 (3%)
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F R + S ++++ ++ + L EA +F + ++W +I + +A
Sbjct: 31 FIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKAL 90
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
F +M P+ + F VL + + LR G VH ++++G++ D++ NAL+++Y
Sbjct: 91 ASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMY 150
Query: 362 SKC---GETKDGRLVFDSIVEKDV---AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+K G VFD + ++ V + I +G+ + + +F+ MP+++
Sbjct: 151 AKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI----DSVRRVFEVMPRKD 206
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
VS++ II+GY + ++ + EM + P+ T SSVL + + KGK++HG
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
+I+ G DV++G++L D YAKS IE S RVF R+ ++ ISW +V G ++G E
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNE 326
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
++ LF +M + P + SV+ AC+H + G K + N + +V
Sbjct: 327 ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG-KQLHGYVLRGGFGSNIFIASALV 385
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
DM S+ G + A + M D +W +++ G
Sbjct: 386 DMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMG 418
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 164/355 (46%), Gaps = 30/355 (8%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
++L+ + K R+E+S F R ++ ISW + + G+VQNG EAL+LF +++ + VK
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P V FSS+ ACA + LG + G + + GF ++ + ++L+ + K G + AR +
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYP 297
FDRM D VSWT I+ G EA +F+EM + N+V++ ++ + G
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 298 EEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+EA+ F MT+ Y ++ V L L + + K+ +E + +
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA---YNFISKMCVEPTGSVWST 517
Query: 357 LIDLYSKCGETKDGRL---VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
L+ S C K+ L V + I D ++ ++ M Y NG+ +E +L M K
Sbjct: 518 LL---SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 414 RN-----DVSW-------SAIISGYLEHKQFD----LVFAVFNEMLLSGEIPNKS 452
+ SW +SG H D + AV +M G + + S
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
>gi|225437951|ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/649 (32%), Positives = 357/649 (55%), Gaps = 48/649 (7%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G ++EA+ LF+ MPERN V++ A++SG+++ GR+ ++ +FE P +NV+SWT+ +CG
Sbjct: 90 GFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLA 149
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
G EA +LF + E V V+++S+ VF + + VS
Sbjct: 150 NAGRIGEARELFNVMPERNV----VSWNSMLVGLIRSGQLEEARRVFN---EMPVKSQVS 202
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
N +I + ++ AR +FD M R+VV+WT ++ + G++ E +F +MPERN
Sbjct: 203 -WNVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERN 261
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
VSW+ MI + +G+ +EA LF +M Y KPN F + A A + GM H
Sbjct: 262 VVSWTAMIGGFAWNGFYKEALLLFLEMKGNYDMKPNDETFISLAYACAGIGFPHLGMQFH 321
Query: 340 AHVLKIGIEKD-------------------------VFI----------SNALIDLYSKC 364
AH++ + D +F N++I+ Y +
Sbjct: 322 AHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRI 381
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G+ + + +FD+I +D +SW SMI GY GQ+ +A LF+NMP R+ V+W+ ++S
Sbjct: 382 GQLEKAQSLFDTIPVRDK---ISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVS 438
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
G+++++ F +F+EM + G P STFS +L A+ ++A L++G+ H ++K F +
Sbjct: 439 GHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEF 498
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D+ L +L YAK G+I + +F +M ++ ISW M+ G + G E++ +FE M
Sbjct: 499 DLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAML 558
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ PN +T L +L ACSH+GL+++G + F++M ++ I+P HY C+V++L R+G++
Sbjct: 559 TSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKV 618
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCK-TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
EAE+FI+ +PFEPD W +LL C N +A RA K L +L + +V+L NI
Sbjct: 619 EEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLELDPLNAPAHVVLCNI 678
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+AS G+ + +RK M KG+RK GCSW+ ++ + + F +P+
Sbjct: 679 HASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDRIHPQ 727
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 154/531 (29%), Positives = 257/531 (48%), Gaps = 88/531 (16%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
+L+ + S + EA + ++ V N MI + +EEA+ LFDGM +RN V+W
Sbjct: 175 MLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNVVTW 234
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GV 180
T++ISG+ + G V+E F++ P +NV+SWTA I GF NGF EAL LFL++ + +
Sbjct: 235 TSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMKGNYDM 294
Query: 181 KPNEVTFSSICKACAEINDFRLGL----------------------------SVFGLI-- 210
KPN+ TF S+ ACA I LG+ S+FG +
Sbjct: 295 KPNDETFISLAYACAGIGFPHLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDF 354
Query: 211 -----FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
F+ + CNS+I +++G+++ A+S+FD + RD +SWT +++ + +G
Sbjct: 355 AWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQ 414
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ +A +F+ MP+R+ V+W+VM++ + Q+ EA LF +M P S FSI+L A
Sbjct: 415 IAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGA 474
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++ L G H ++K E D+ + N+LI +Y+KCGE D +F ++ +D +
Sbjct: 475 AGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRD---L 531
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+SWNSMI G+ +G EA VF ML S
Sbjct: 532 ISWNSMIMGFSHHGLTSEA-------------------------------LKVFEAMLTS 560
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY-------AK 498
G PN TF +L A + L +G +L + DVF + Y +
Sbjct: 561 GTHPNSVTFLGILSACSHAGLLNQGWELFDAM------SDVFAIQPQLEHYVCMVNLLGR 614
Query: 499 SGDIESSRRVFDRMPDKNEIS-WTVMVR----GLAESGYAKESINLFEEME 544
+G +E + ++P + +++ W ++ G+ +G A+ + E++
Sbjct: 615 AGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLELD 665
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 211/478 (44%), Gaps = 83/478 (17%)
Query: 221 VC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
VC SL++ K G +D AR++F+ M +R+VV++ +L +++ G L +A R F+EMPER
Sbjct: 77 VCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPER 136
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N VSW+ ++ +G EA LF M + N ++ +L L +RSG
Sbjct: 137 NVVSWTSLLCGLANAGRIGEARELFNVMP----ERNVVSWNSMLVGL-----IRSGQLEE 187
Query: 340 A-HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
A V K N +I Y++ ++ R++FD + +++ VV+W SMI GY
Sbjct: 188 ARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRN---VVTWTSMISGYCRA 244
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSV 457
G ++E LF MP+RN VSW+A+I G+ + + +F EM + ++ PN TF S+
Sbjct: 245 GNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMKGNYDMKPNDETFISL 304
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLG---------------------------- 489
A A + G H +I + YD + G
Sbjct: 305 AYACAGIGFPHLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIFFRNSM 364
Query: 490 -------TALTDTYAKSGDIESSRRVFD-------------------------------R 511
++ + Y + G +E ++ +FD
Sbjct: 365 SYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNN 424
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
MPD++ ++WTVMV G ++ E+ LF EM ++P T +L A +D+G
Sbjct: 425 MPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQG 484
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ F+ + + + ++ M ++ G + +A + M D +W S++ G
Sbjct: 485 -RQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKM-ISRDLISWNSMIMG 540
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 191/403 (47%), Gaps = 90/403 (22%)
Query: 266 LGEARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
L EAR + DEMP R V W+ ++++++++G+ +EA LF M
Sbjct: 57 LREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMP------------- 103
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
E++V NA++ Y +CG D F+ + E++
Sbjct: 104 --------------------------ERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERN 137
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
VVSW S++ G G++ EA+ELF+ MP+RN VSW++++ G + Q + VFNE
Sbjct: 138 ---VVSWTSLLCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNE 194
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M + ++ +++ ++ A + +E+ + L + +V T++ Y ++G+
Sbjct: 195 MPVKSQV----SWNVMIAGYAEHSRMEEARVLFDGMGD----RNVVTWTSMISGYCRAGN 246
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTILSVLF 560
++ +F +MP++N +SWT M+ G A +G+ KE++ LF EM+ + PN+ T +S+ +
Sbjct: 247 VQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMKGNYDMKPNDETFISLAY 306
Query: 561 ACSHSGLVDKGLKY------------------FNSMEPIY----------------NIKP 586
AC+ G G+++ F S+ +Y ++
Sbjct: 307 ACAGIGFPHLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSY 366
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
N + +++ R G+L +A+ +++P D +W S+++G
Sbjct: 367 NTQSCNSMINGYIRIGQLEKAQSLFDTIPVR-DKISWTSMING 408
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 165/330 (50%), Gaps = 25/330 (7%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N MIN I+ G LE+AQ LFD +P R+++SWT++I+G+ G++ ++ + F P ++ +
Sbjct: 372 NSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAV 431
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+WT + G VQN EA LF ++ GV P TFS + A + G L+
Sbjct: 432 AWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLL 491
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K FE + + NSLI++ K GE+ A S+F +M RD++SW ++ F G EA
Sbjct: 492 MKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEAL 551
Query: 271 RIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSA 325
++F+ M N V++ +++ + +G + + LF M+ ++ +P + +++
Sbjct: 552 KVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNL 611
Query: 326 LASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCG----ETKDGRLVFDSIVE 379
L R+G A + K+ E D+ I AL+ + CG T R ++E
Sbjct: 612 LG-----RAGKVEEAEEFISKLPFEPDLTIWGALLGV---CGFGMINTGVARRAAKRLLE 663
Query: 380 KD----VAHVVSWN--SMIGGYGLNGQMEE 403
D AHVV N + IG GQ+ +
Sbjct: 664 LDPLNAPAHVVLCNIHASIGQRAEEGQLRK 693
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 441 EMLLSGEIPNKSTFS-SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
++ LSG +K F S + S L + + + ++ G V T+L ++K+
Sbjct: 30 QIPLSGTHYSKLRFDDSQILECLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKN 89
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G I+ +R +F+ MP++N +++ M+ G + G ++ FEEM + N ++ S+L
Sbjct: 90 GFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPER----NVVSWTSLL 145
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
+++G + + + FN M P N+ + ++ L RSG+L EA N MP +
Sbjct: 146 CGLANAGRIGEARELFNVM-PERNVVS----WNSMLVGLIRSGQLEEARRVFNEMPVKSQ 200
Query: 620 SNAWASLLSG 629
+W +++G
Sbjct: 201 V-SWNVMIAG 209
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/687 (31%), Positives = 346/687 (50%), Gaps = 128/687 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL++ + QGR +H ++K+GI RYL LL MY
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMY-------------------- 92
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G+L +A+R+FD + +RN
Sbjct: 93 -----------AKCGSLTDARRVFDSIRDRN----------------------------- 112
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++SWTA I FV + EA K + + +G KP++VTF S+ A +LG V
Sbjct: 113 --IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKV 170
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I +AG E V SL+ + + + GD+
Sbjct: 171 HMEIVEAGLELEPRVGTSLVGM-------------------------------YAKCGDI 199
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+AR IFD +PE+N V+W+++IA Y Q G + A L M + PN F+ +L
Sbjct: 200 SKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGC 259
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ AL G VH ++++ G +++++ N+LI +Y KCG
Sbjct: 260 TTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCG--------------------- 298
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+EEA++LF ++P R+ V+W+A+++GY + D +F M G
Sbjct: 299 -------------GLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG 345
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P+K TF+SVL + +S A L++GK +H +++ G+ DV+L +AL YAK G ++ +
Sbjct: 346 IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDAS 405
Query: 507 RVFDRMPDKNEISWTVMVRGL-AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF++M ++N ++WT ++ G A+ G +E++ F++M+K I P+++T SVL AC+H
Sbjct: 406 LVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV++G K+F SM Y IKP HY+C VD+L R+G L EAE+ I SMPF P + W +
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LLS C+ + + + ERA +N+ KL + YV LS+IYA+AGR+ DA VR++M ++ +
Sbjct: 526 LLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDV 585
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
K G SW+EV +VH F + +P+
Sbjct: 586 VKEPGQSWIEVDGKVHVFHVEDKSHPE 612
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/585 (35%), Positives = 319/585 (54%), Gaps = 34/585 (5%)
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
++Q A L+ +L + + + T+ + +AC+ V + K GF+
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V N+LI + A VF+ D VSW IL +IE+G++ EA+ I+ +MP
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 278 ER-------------------------------NEVSWSVMIARYNQSGYPEEAFRLFRQ 306
ER + V+WS +IA + Q+ EEA R F
Sbjct: 307 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 366
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M + + LSA A+L + G +H+ LKIG E + + NALI +YSKCG+
Sbjct: 367 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGD 426
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
R +FD E + ++SWNSMI GY ++ AK +FD+MP+++ VSWS++ISGY
Sbjct: 427 IMVARKLFD---EAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 483
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
++ FD A+F EM +SG P+++T SV+ A A +A+LE+GK +H I + G +V
Sbjct: 484 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINV 543
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
LGT L D Y K G +E++ VF M +K +W ++ GLA +G + S+++F M+K
Sbjct: 544 ILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC 603
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+TPNE+T + VL AC H GLVD+G +F SM + I+PN +HY C+VD+L R+G+L E
Sbjct: 604 HVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQE 663
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE+ +N MP PD W +LL CK + + ++ R + L +L +H +VLLSNIYAS
Sbjct: 664 AEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYAS 723
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
G+W D + +R +MT+ + K GCS +E +H F +P
Sbjct: 724 KGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHP 768
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 251/487 (51%), Gaps = 15/487 (3%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+ + +H H++K G + Y+ L+ + +A + + + D V N ++ I
Sbjct: 231 EAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYI 290
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ GN+EEA+ ++ MPER+ ++ ++I F G V E+ F+ +++++W+A I
Sbjct: 291 EIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIAC 350
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
F QN EA++ F+ + + GV +EV S ACA + +G + L K G E +
Sbjct: 351 FQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESY 410
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+++ N+LI + K G++ +AR +FD D++SW ++ +++ + A+ IFD MPE
Sbjct: 411 INLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPE 470
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
++ VSWS MI+ Y Q+ +E LF++M FKP+ + V+SA A L AL G V
Sbjct: 471 KDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWV 530
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HA++ + G+ +V + LID+Y KCG + VF ++EK ++ +WN++I G +N
Sbjct: 531 HAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS---TWNALILGLAMN 587
Query: 399 GQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKST 453
G +E + ++F NM K N++++ ++ D F M+ +I PN
Sbjct: 588 GLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKH 647
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM- 512
+ ++ L++ ++L + ++ DV AL K GD E RRV ++
Sbjct: 648 YGCMVDLLGRAGKLQEAEEL---LNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI 704
Query: 513 ---PDKN 516
PD +
Sbjct: 705 ELQPDHD 711
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 155/395 (39%), Gaps = 96/395 (24%)
Query: 36 LVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
+V G+ +H +K G L L+ MY + A ++ + DL+ N MI+
Sbjct: 391 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
++ ++ A+ +FD MPE++ VSW+++IS
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMIS----------------------------- 481
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
G+ QN E L LF ++ SG KP+E T S+ ACA + G V I + G
Sbjct: 482 --GYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 539
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+V + +LI + +K G V+ A VF M ++ + +W ++ LG A
Sbjct: 540 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALI--------LGLA------ 585
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+G E + +F M + PN F VL A + + G
Sbjct: 586 -----------------MNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG 628
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
H YS ++ D ++ +V H + M+
Sbjct: 629 QH---------------------HFYS---------MIHDHKIQPNVKH---YGCMVDLL 655
Query: 396 GLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLEH 429
G G+++EA+EL + MP DV +W A++ +H
Sbjct: 656 GRAGKLQEAEELLNRMPMTPDVATWGALLGACKKH 690
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/768 (29%), Positives = 377/768 (49%), Gaps = 124/768 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL+ + + G+ +H H++++ + + +L+ RL+ Y + + + D
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR------------- 133
+ N ++ A + LE+A LF MPERN VSW LIS ++G
Sbjct: 71 IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRC 130
Query: 134 ----------------------------VEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
+ +++ F P N +S+TA + G +
Sbjct: 131 HGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQV 190
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAE--INDFRL------------GLSVFGLIF 211
EA +LF +L + + + V+ SS+ C+ +F L G V L
Sbjct: 191 NEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTI 250
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF----------- 260
K GFE + + NSL+ + K G +D A +F M + VVSW V++ +
Sbjct: 251 KHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE 310
Query: 261 ------------------------IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
I+ GD+ R++FD M + SW+ +++ Y+Q+
Sbjct: 311 YLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNEN 370
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+EA +LFR+M S P+ + +I+LS+LA + L G VHA K D+++++
Sbjct: 371 HKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASG 430
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LI +YSKCG ++E AK +FD + + +
Sbjct: 431 LIGMYSKCG----------------------------------KVEMAKRIFDRIAELDI 456
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
V W+++++G + F F +M G P++ ++++VL A ++SL +G+ +H +
Sbjct: 457 VCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQ 516
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
I + G+ D F+G+AL D Y+K GD++++R VFD M KN ++W M+ G A++G E+
Sbjct: 517 IAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEA 576
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ L+E+M + P+ +T ++VL ACSHSGLVD G+K FNSM+ + ++P HYTC++D
Sbjct: 577 VLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIID 636
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
L R+GRL EAE I+ MP + D W LLS C+ Y + +A RA + L+ L ++ A
Sbjct: 637 SLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAP 696
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
YVLL+NIY+S GRW DA VR+LM+ + K G SW+E +N + F
Sbjct: 697 YVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFM 744
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 201/449 (44%), Gaps = 65/449 (14%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+S+ + C + G + + ++ + N LI K +D +R +FD+M
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
KRD+ +W IL + + +L +A +F EMPERN VSW+ +I+ ++G
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNG----------- 116
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
A +L + G H +KIG++ ++++ NAL+ +Y+KC
Sbjct: 117 ------------------ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 158
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAI 422
D F + E + VS+ +M+GG + Q+ EA LF M + + VS S++
Sbjct: 159 IGDAIQAFGDVPEPN---EVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSV 215
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+ + N++L +S G+ +H IK GF
Sbjct: 216 LGVCSRGGCGEFGLHDSNDVL---------------------SSDVHGQQVHCLTIKHGF 254
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+ L +L D YAK+G+++S+ +F MP+ + +SW VM+ G + + ++I +
Sbjct: 255 ESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQR 314
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ P+E+T +++L AC SG ++ G + F+ M P+ + ++ S++
Sbjct: 315 MQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSLSSWNTILSGYSQNE 369
Query: 603 RLSEAEDFINSMPF---EPDSNAWASLLS 628
EA M F PD A +LS
Sbjct: 370 NHKEAVKLFREMQFRSVHPDRTTLAIILS 398
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 168/354 (47%), Gaps = 55/354 (15%)
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ T+ + +L KA +G +HAH+L+ + D F+SN LI+ Y+KC R
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+FD + ++D + +WN+++G Y ++E+A LF MP+RN VSW+ +IS +
Sbjct: 61 RLFDQMPKRD---IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNG- 116
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
A ++ +E G+ HG IK+G ++++G A
Sbjct: 117 ----------------------------ACGALVDVECGRRCHGISIKIGLDNNIYVGNA 148
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L YAK I + + F +P+ NE+S+T M+ GLA+S E+ LF M + I +
Sbjct: 149 LLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVD 208
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC----------------VV 595
+++ SVL CS G + GL N + + +G+ C ++
Sbjct: 209 SVSLSSVLGVCSRGGCGEFGLHDSND---VLSSDVHGQQVHCLTIKHGFESDLHLNNSLL 265
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
DM +++G + AE +MP E +W +++G Y + + +A++ L ++
Sbjct: 266 DMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAG---YGQKSQSSKAIEYLQRM 315
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 145/347 (41%), Gaps = 53/347 (15%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
S++P+ + T +L + L+ GR +H K + YL + L+ MY
Sbjct: 385 SVHPDRT------TLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKC 438
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLE-EAQRLFDGMPER----NEVSW--- 121
K A I + D+V N M+ A + +L+ EA F M E+ ++ S+
Sbjct: 439 GKVEMAKRIFDRIAELDIVCWNSMM-AGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATV 497
Query: 122 --------------------------------TALISGFMKHGRVEESMWYFERNPFQNV 149
+ALI + K G V+ + W F+ +N
Sbjct: 498 LSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNT 557
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
++W I G+ QNG EA+ L+ ++ SG KP+ +TF ++ AC+ G+ +F
Sbjct: 558 VTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNS 617
Query: 210 IFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLG 267
+ + G E V +I + G + A + D+M K D + W V+L D+
Sbjct: 618 MQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVS 677
Query: 268 EARRIFDE---MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
ARR +E + +N + ++ Y+ G ++A + R++ Y+
Sbjct: 678 LARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDA-KAVRELMSYN 723
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/674 (32%), Positives = 341/674 (50%), Gaps = 95/674 (14%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +H +IKTG+H Y ++L + C+++ +
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKL--------------------------IEFCVLSPH--- 49
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
FDG+P V FE N++ W G
Sbjct: 50 ---------FDGLPYAISV---------------------FETIQEPNLLIWNTMFRGHA 79
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ AL L++ ++ G+ PN TF + K+CA+ FR G + G + K G++ +
Sbjct: 80 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 139
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V SLI++ ++ G ++ AR VFD+ RDVVS+T ++ + G + A+++FDE+P ++
Sbjct: 140 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 199
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MI+ Y ++G +EA LF++M + + +P+ S V+SA A ++ G VH+
Sbjct: 200 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 259
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G ++ I NALIDLY KCGE
Sbjct: 260 WIDDHGFGSNLKIVNALIDLYIKCGE---------------------------------- 285
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+E A LF+ + ++ +SW+ +I GY + +F EML SGE PN T S+L A
Sbjct: 286 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 345
Query: 461 SASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + ++E G+ +H I K G T+L D YAK GDIE++++VFD + +++
Sbjct: 346 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 405
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW M+ G A G A + ++F M K I P+++T + +L ACSHSG++D G F SM
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ Y I P HY C++D+L SG EAE+ IN+M EPD W SLL CK Y N ++
Sbjct: 466 KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVEL 525
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E +NL K+ ++P YVLLSNIYA+AGRW + +R L+ +KG++K GCS +E+ +
Sbjct: 526 GESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDS 585
Query: 699 QVHFFFQKTDHNPK 712
VH F +P+
Sbjct: 586 VVHEFIIGDKFHPR 599
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 197/422 (46%), Gaps = 71/422 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +G+ +HGH++K G + Y+ T L+ MY+ + + +A ++ + D
Sbjct: 109 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 168
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + +I G + AQ++FD +P ++ VSW A+IS
Sbjct: 169 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMIS-------------------- 208
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
G+ + G + EAL+LF +++++ V+P+E T S+ ACA+ LG V
Sbjct: 209 -----------GYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 257
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I GF ++ + N+LI L +K GEV+ A +F+ + +DV+SW ++ + M
Sbjct: 258 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM--- 314
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+EA LF++M R PN +L A
Sbjct: 315 ----------------------------NLYKEALLLFQEMLRSGESPNDVTMLSILPAC 346
Query: 327 ASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L A+ G +H ++ K G+ +LID+Y+KCG+ + + VFDSI+ + ++
Sbjct: 347 AHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS- 405
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFN 440
SWN+MI G+ ++G+ A ++F M K +D+++ ++S DL +F
Sbjct: 406 --SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR 463
Query: 441 EM 442
M
Sbjct: 464 SM 465
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 54/322 (16%)
Query: 28 LKDITSQNLVIQGRALHGH----------LIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
+KD+ S N +I G A G+ ++KT + + T ++ S+E
Sbjct: 197 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDES-TMVSVVSACAQSASIELGR 255
Query: 78 IVK---DLNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
V D +GF +L + N +I+ I+ G +E A LF+G+ ++ +SW LI G
Sbjct: 256 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG----- 310
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
Y N ++ EAL LF ++L SG PN+VT SI
Sbjct: 311 -------YTHMNLYK-------------------EALLLFQEMLRSGESPNDVTMLSILP 344
Query: 193 ACAEINDFRLGLSVFGLIFK--AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
ACA + +G + I K G S SLI + K G+++ A+ VFD + R +
Sbjct: 345 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 404
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
SW ++ F G A IF M E +++++ +++ + SG + +FR
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 307 MTR-YSFKPNTSCFSIVLSALA 327
M Y P + ++ L
Sbjct: 465 MKEDYKITPKLEHYGCMIDLLG 486
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/604 (33%), Positives = 334/604 (55%), Gaps = 65/604 (10%)
Query: 109 LFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
L G ERN V +L++ ++K+ RV+ + F+ ++VISW + I G+V NG + +
Sbjct: 71 LKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 129
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L +F+++L SG++ + T S+ CA+ LG +V + KA F + CN+L+ +
Sbjct: 130 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 189
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K G++D A++VF M R VVS+T ++ + G GEA ++F+EM E
Sbjct: 190 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-------- 241
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
P+ + VL+ A + L G VH + + +
Sbjct: 242 -----------------------ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 278
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D+F+SNAL+D+Y+KCG ++ LVF + KD ++SWN++IGGY N EA LF
Sbjct: 279 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD---IISWNTIIGGYSKNCYANEALSLF 335
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
+ + LE K+F P++ T + VL A AS+++ +
Sbjct: 336 NLL---------------LEEKRFS---------------PDERTVACVLPACASLSAFD 365
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
KG+++HG I++ G+ D + +L D YAK G + + +FD + K+ +SWTVM+ G
Sbjct: 366 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 425
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G+ KE+I LF +M + I +E++ +S+L+ACSHSGLVD+G ++FN M I+P
Sbjct: 426 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 485
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY C+VDML+R+G L +A FI +MP PD+ W +LL GC+ + + ++AE+ + +++
Sbjct: 486 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 545
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
L E+ YVL++NIYA A +W +RK + ++GLRK+ GCSW+E++ +V+ F
Sbjct: 546 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 605
Query: 709 HNPK 712
NP+
Sbjct: 606 SNPE 609
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 178/374 (47%), Gaps = 48/374 (12%)
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
FDE+ + W++++ +SG + LF++M + ++ FS V + +SL+++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G +H +LK G + + N+L+ Y K R VFD + E+D V+SWNS+I
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD---VISWNSII 117
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
GY NG E+ +VF +ML+SG + +
Sbjct: 118 NGYVSNGLAEKG-------------------------------LSVFVQMLVSGIEIDLA 146
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T SV A + G+ +H +K F + L D Y+K GD++S++ VF M
Sbjct: 147 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 206
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
D++ +S+T M+ G A G A E++ LFEEME+ I+P+ T+ +VL C+ L+D+G
Sbjct: 207 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 266
Query: 573 KYFNSMEPIYNIKPNGRHY-----TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ IK N + ++DM ++ G + EAE + M + D +W +++
Sbjct: 267 RVHEW------IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTII 319
Query: 628 SGC--KTYKNEQIA 639
G Y NE ++
Sbjct: 320 GGYSKNCYANEALS 333
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 5/245 (2%)
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD + + W+ +++ + F +F +M+ SG + TFS V + +S+ S+
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
G+ LHG I+K GF +G +L Y K+ ++S+R+VFD M +++ ISW ++ G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+G A++ +++F +M + I + TI+SV C+ S L+ G + +S+
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-RAVHSIGVKACFSRE 179
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
R ++DM S+ G L A+ M + ++ S+++G Y E +A AVK
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAG---YAREGLAGEAVKLFE 235
Query: 648 KLAEE 652
++ EE
Sbjct: 236 EMEEE 240
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 154/359 (42%), Gaps = 75/359 (20%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF E + + T +L L+ +G+ +H
Sbjct: 233 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH----------------------- 269
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
+ ++ N++ GFD+ V N +++ + G+++EA+ +F M ++ +SW +I G
Sbjct: 270 ---EWIKENDL-----GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 321
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVT 186
+ K N ++ EAL LF LLE P+E T
Sbjct: 322 YSK-------------------------------NCYANEALSLFNLLLEEKRFSPDERT 350
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+ + ACA ++ F G + G I + G+ V NSL+ + K G + LA +FD +
Sbjct: 351 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 410
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFR 302
+D+VSWTV++ + G EA +F++M E +E+S+ ++ + SG +E +R
Sbjct: 411 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 470
Query: 303 LFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALI 358
F M +P ++ ++ LA R+G + A+ + + I D I AL+
Sbjct: 471 FFNIMRHECKIEPTVEHYACIVDMLA-----RTGDLIKAYRFIENMPIPPDATIWGALL 524
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 127/324 (39%), Gaps = 80/324 (24%)
Query: 7 SLFSIN-PETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
SLF++ E F+ T C+L S + +GR +HG++++ G +R++ L+ M
Sbjct: 333 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 392
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + G L A LFD + ++ VSWT +I
Sbjct: 393 Y-------------------------------AKCGALLLAHMLFDDIASKDLVSWTVMI 421
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
+G+ H GF EA+ LF ++ ++G++ +E+
Sbjct: 422 AGYGMH-------------------------------GFGKEAIALFNQMRQAGIEADEI 450
Query: 186 TFSSICKACAEINDFRLGLSVFGLI-FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
+F S+ AC+ G F ++ + E V ++ + + G++ A +
Sbjct: 451 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 510
Query: 245 ME-KRDVVSWTVIL-------DVFIEMGDLGE--ARRIFDEMPERNEVSWSVMIARYNQS 294
M D W +L DV L E A ++F+ PE N + +M Y ++
Sbjct: 511 MPIPPDATIWGALLCGCRIHHDV-----KLAEKVAEKVFELEPE-NTGYYVLMANIYAEA 564
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSC 318
E+ RL +++ + + N C
Sbjct: 565 EKWEQVKRLRKRIGQRGLRKNPGC 588
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/567 (35%), Positives = 309/567 (54%), Gaps = 36/567 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N + W + G+ + ALKL++ ++ G+ PN TF + K+CA+ F G +
Sbjct: 30 NQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIH 89
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + K G+E + V SLI++ + G ++ A VFDR RDVVS+T ++ + G++
Sbjct: 90 GHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIR 149
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
A+ +FDE+P ++ VSW+ MI+ Y ++G +EA LF++M + + +P+ VLSA A
Sbjct: 150 SAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACA 209
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+++ G VH+ + G ++ I NALIDLYSKCG
Sbjct: 210 QSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG---------------------- 247
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
Q+E A LF+ + ++ VSW+ +I GY + +F EML SGE
Sbjct: 248 ------------QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE 295
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESS 505
PN T S+L A A + +++ G+ +H I K L T+L D YAK GDIE++
Sbjct: 296 SPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAA 355
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+VF+ M K+ SW M+ G A G A +LF M K I P+++T + +L ACSHS
Sbjct: 356 HQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHS 415
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G +D G F SM Y+I P HY C++D+L SG EA++ I +MP EPD W S
Sbjct: 416 GKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCS 475
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL C+ + N ++AE +NL K+ E+P YVLLSNIYA+AG W + VR L+ KG+
Sbjct: 476 LLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGM 535
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K GCS +E+ ++VH F +P+
Sbjct: 536 KKVPGCSSIEIDSEVHEFIVGDKLHPR 562
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 199/364 (54%), Gaps = 9/364 (2%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A +F + E N++ W+ M+ Y S P A +L+ M PN+ F +L + A
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
KA G +H HVLK+G E D+++ +LI +Y++ G +D VFD +D VVS+
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD---VVSY 135
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++I GY +G + A+E+FD +P ++ VSW+A+ISGY E + +F EM+ +
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P++ T +VL A A S+E G+ +H I GF ++ + AL D Y+K G +E++ +
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGL 255
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+ + K+ +SW ++ G KE++ LF+EM ++ +PN++TI+S+L AC+H G +
Sbjct: 256 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI 315
Query: 569 DKGL---KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
D G Y + P+ R T ++DM ++ G + A NSM ++W +
Sbjct: 316 DIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNA 372
Query: 626 LLSG 629
++ G
Sbjct: 373 MIFG 376
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 204/442 (46%), Gaps = 77/442 (17%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T LLK +G+ +HGH++K G
Sbjct: 65 NSY--TFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEP----------------------- 99
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
DL VH +I+ Q G LE+A ++FD R+ VS+TALI+G+ G + +
Sbjct: 100 --------DLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSA 151
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F+ P ++V+SW A I G+ + G EAL+LF +++++ V+P+E T ++ ACA+
Sbjct: 152 QEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQS 211
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
LG V I GF ++ + N+LI L K G+V+ A +F+ + +DVVSW +
Sbjct: 212 RSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTL- 270
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
I Y +EA LF++M R PN
Sbjct: 271 ------------------------------IGGYTHMNLYKEALLLFQEMLRSGESPNDV 300
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF----ISNALIDLYSKCGETKDGRLV 373
+L A A L A+ G +H ++ K KDV + +LID+Y+KCG+ + V
Sbjct: 301 TIVSILPACAHLGAIDIGRWIHVYIDK--KLKDVTNAPSLRTSLIDMYAKCGDIEAAHQV 358
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEH 429
F+S++ K ++ SWN+MI G+ ++G+ +LF M K +D+++ ++S
Sbjct: 359 FNSMLHKSLS---SWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHS 415
Query: 430 KQFDLVFAVFNEMLLSGEIPNK 451
+ DL +F M +I K
Sbjct: 416 GKLDLGRHIFKSMTQDYDITPK 437
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/601 (33%), Positives = 335/601 (55%), Gaps = 30/601 (4%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL++ + + +E++ F P + W AI +Q+ + ++LF K+ S +K
Sbjct: 714 ALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKA 773
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
T + +AC ++ + G +F+ G + VS+CN LI++ K G+++LAR VF
Sbjct: 774 ETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVF 833
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE----VSWSVMIARYNQSGYPE 298
D ME R+ SW ++ + +G L +A +F E+ + V+W+ +++ + GY E
Sbjct: 834 DSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 893
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
E + ++M FKPN+S + VL A++ L L G H +VL+ G + DV++ +LI
Sbjct: 894 EVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI 953
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR---- 414
D+Y K + VFD++ ++ + +WNS++ GY G E+A L + M K
Sbjct: 954 DMYVKNHSLXSAQAVFDNMKNRN---IFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP 1010
Query: 415 NDVSWSAIISGY----LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
+ V+W+ +ISGY K F +PN ++ + +L A AS++ L+KG
Sbjct: 1011 DLVTWNGMISGYAMWGCARKAF---------------MPNSASITCLLRACASLSLLQKG 1055
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K++H I+ GF DVF+ TAL D Y+KS ++++ +VF R+ +K SW M+ G A
Sbjct: 1056 KEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIF 1115
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G KE+I++F EM+K + P+ +T ++L AC +SGL+ +G KYF+SM Y I P H
Sbjct: 1116 GLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEH 1175
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
Y C+VD+L R+G L EA D I++MP +PD+ W +LL C+ +KN AE A KNL+KL
Sbjct: 1176 YCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLE 1235
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+ A Y+L+ N+Y+ RW D ++R+LM G+R SW+++ +VH F +
Sbjct: 1236 PNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPH 1295
Query: 711 P 711
P
Sbjct: 1296 P 1296
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 231/513 (45%), Gaps = 64/513 (12%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE-ALKLFLKLLESGVKP 182
LIS ++ G + F +N + W + + F + S L++F +L GV
Sbjct: 613 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 672
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +S K C + D LG+ + G + K GF DL
Sbjct: 673 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGF--------------------DL----- 707
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
DV +++ + L +A ++F EMP + W+ I QS ++
Sbjct: 708 ------DVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVE 761
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR+M K T+ VL A + AL + +H +V + G++ DV + N LI +YS
Sbjct: 762 LFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYS 821
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVS 418
K G+ + R VFDS+ ++ + SWNSMI Y G + +A LF + K + V+
Sbjct: 822 KNGKLELARRVFDSMENRNTS---SWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 878
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+ ++SG+ H + V + M G PN S+ +SVL A + + L GK+ HG ++
Sbjct: 879 WNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVL 938
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ GF DV++GT+L D Y K+ + S++ VFD M ++N +W +V G + G ++++
Sbjct: 939 RNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALR 998
Query: 539 LFEEMEKTSIT------------------------PNELTILSVLFACSHSGLVDKGLKY 574
L +MEK I PN +I +L AC+ L+ KG K
Sbjct: 999 LLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKG-KE 1057
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ + + T ++DM S+S L A
Sbjct: 1058 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNA 1090
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 187/352 (53%), Gaps = 26/352 (7%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE--SMWY-FE 142
D+ + N +I+ + G LE A+R+FD M RN SW ++IS + G + + S++Y E
Sbjct: 809 DVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELE 868
Query: 143 RNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ + ++++W + G +G+ E L + ++ G KPN + +S+ +A +E+
Sbjct: 869 SSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLN 928
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G G + + GF+ V V SLI + +K + A++VFD M+ R++ +W ++ +
Sbjct: 929 MGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYS 988
Query: 262 EMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
G +A R+ ++M + + V+W+ MI+ Y G R +F PN++
Sbjct: 989 FKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG-----------CARKAFMPNSA 1037
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ +L A ASL L+ G +H ++ G +DVF++ ALID+YSK K+ VF I
Sbjct: 1038 SITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI 1097
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISG 425
K +A SWN MI G+ + G +EA +F+ M K + ++++A++S
Sbjct: 1098 QNKTLA---SWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSA 1146
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 39/376 (10%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS-GYPEEAFRLFRQMTRYSFKP 314
++ ++ GD A +F RN + W+ + + S G +F+++
Sbjct: 613 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 672
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
++ +S+ L + + GM +H ++K G + DV++ AL++ Y +C
Sbjct: 673 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRC---------- 722
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+GL E+A ++F MP + W+ I L+ ++
Sbjct: 723 --------------------WGL----EKANQVFHEMPNPEALLWNEAIILNLQSEKLQK 758
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F +M S +T VL A + +L K +HG + + G DV L L
Sbjct: 759 GVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLIS 818
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K+G +E +RRVFD M ++N SW M+ A G+ ++ +LF E+E + + P+ +T
Sbjct: 819 MYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVT 878
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS---EAEDFI 611
+L G ++ L M+ KPN T V+ +S G L+ E ++
Sbjct: 879 WNCLLSGHFLHGYKEEVLNILQRMQG-EGFKPNSSSMTSVLQAISELGFLNMGKETHGYV 937
Query: 612 NSMPFEPDSNAWASLL 627
F+ D SL+
Sbjct: 938 LRNGFDCDVYVGTSLI 953
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 180/435 (41%), Gaps = 59/435 (13%)
Query: 83 NGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NGFD + V +I+ ++ +L AQ +FD M RN +W +L+SG+ G E+++
Sbjct: 940 NGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRL 999
Query: 141 FERNPFQNV----ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ + + ++W I G+ G A K F+ PN + + + +ACA
Sbjct: 1000 LNQMEKEGIKPDLVTWNGMISGYAMWGC---ARKAFM--------PNSASITCLLRACAS 1048
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
++ + G + L + GF + V V +LI + K + A VF R++ + + SW +
Sbjct: 1049 LSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCM 1108
Query: 257 LDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYS 311
+ F G EA +F+EM + + ++++ +++ SG E ++ F M T Y
Sbjct: 1109 IMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYR 1168
Query: 312 FKPNTSCFSIVLSALASLKALRSGMH-VHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P + ++ L L +H LK D I AL+ C K+
Sbjct: 1169 IVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK----PDATIWGALL---GSCRIHKN- 1220
Query: 371 RLVFDSIVEKDVAHVVSWNS-----MIGGYGLNGQ---MEEAKELFDNMPKRNDVSWSAI 422
L F K++ + NS M+ Y + + M+ +EL RN WS I
Sbjct: 1221 -LXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWI 1279
Query: 423 ISGYLEH-------------KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
H K + ++ + +EM G +P+ V C ++ +EK
Sbjct: 1280 QINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPD------VNCVYQNMDEVEK 1333
Query: 470 GKDLHGKIIKLGFPY 484
K L KL Y
Sbjct: 1334 QKILLSHTEKLAITY 1348
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/628 (32%), Positives = 339/628 (53%), Gaps = 66/628 (10%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F ++ C NA+++ G Q + + N + T +++ + K +++++ F+R
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAA-NVFAMTGVVNMYAKCRQIDDAYKMFDRM 208
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++++SW I GF QNGF+ +AL+L L++ + G +P+ +T ++ A A++ +G
Sbjct: 209 PERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGK 268
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
S+ G +AGF K V++ +L + K G V+ AR +FD M+++ VVSW ++D ++
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV--- 325
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
Q+G PE+A +F +M P L
Sbjct: 326 ----------------------------QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A L L G VH V ++ + D+ + N+LI +YSKC +F+++ + H
Sbjct: 358 ACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR--TH 415
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VSWN+MI GY NG++ EA F+EM
Sbjct: 416 -VSWNAMILGYAQNGRVSEA-------------------------------LNCFSEMKS 443
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G P+ T SV+ A A ++ K +HG II+ ++F+ TAL D Y+K G I
Sbjct: 444 LGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHM 503
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R++FD + D++ I+W M+ G G + +++LF++M+K ++ PN++T LSV+ ACSH
Sbjct: 504 ARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSH 563
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLVD+GL++F SM+ Y ++P+ HY +VD+L R+GR+ EA DFI +MP P +
Sbjct: 564 SGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYG 623
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
++L CK +KN ++ E+A K L++L + +VLL+NIYAS +W VRK M +KG
Sbjct: 624 AMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKG 683
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
L+K+ GCS VE+RN+VH F+ + +P+
Sbjct: 684 LKKTPGCSVVELRNEVHSFYSGSTTHPQ 711
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 230/514 (44%), Gaps = 71/514 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVIS--WTAAICGFVQNGFSFEALKLFLKLLESG 179
T L+S F K+G + E+ FE P + + + + G+ +N AL ++
Sbjct: 85 TKLVSLFSKYGSINEAARVFE--PIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD 142
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
VKP F+ + K C + D + G + G + F +V ++ + K ++D
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQID--- 199
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+A ++FD MPER+ VSW+ +IA ++Q+G+ ++
Sbjct: 200 ----------------------------DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A L +M +P++ VL A A + L G +H + ++ G K V IS AL D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+YSKCG + RL+ FD M ++ VSW
Sbjct: 292 MYSKCGSVETARLI----------------------------------FDGMDQKTVVSW 317
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
++++ GY+++ + + AVF +ML G P T L A A + LE+GK +H + +
Sbjct: 318 NSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQ 377
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
L D+ + +L Y+K ++ + +F+ + + +SW M+ G A++G E++N
Sbjct: 378 LNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNC 437
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F EM+ + P+ T++SV+ A + V + K+ + + + N T +VDM S
Sbjct: 438 FSEMKSLGMKPDSFTMVSVIPALAELS-VTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ G + A + M + W +++ G T+
Sbjct: 497 KCGAIHMARKLFD-MISDRHVITWNAMIDGYGTH 529
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 157/391 (40%), Gaps = 59/391 (15%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +H + + + + + L+ MY ++ A++I +LNG V N MI
Sbjct: 367 RGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYA 426
Query: 99 QWGNLEEAQRLFDGM----------------PERNEVS------W--------------- 121
Q G + EA F M P E+S W
Sbjct: 427 QNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIF 486
Query: 122 --TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
TAL+ + K G + + F+ ++VI+W A I G+ +G AL LF K+ +
Sbjct: 487 VTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLA 238
V+PN++T+ S+ AC+ GL F + + G E + +++ L + G + A
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606
Query: 239 RSVFDRME-KRDVVSWTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIAR-Y 291
+ M + + +L IE+G+ A+++F+ P+ E + V++A Y
Sbjct: 607 WDFIENMPISPGITVYGAMLGACKIHKNIEVGE-KAAKKLFELNPD--EGGYHVLLANIY 663
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
+ + + + M + K C + L + + SG H +I
Sbjct: 664 ASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELR--NEVHSFYSGSTTHPQSKRIY----A 717
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
F+ + ++ + G D L+ D VE DV
Sbjct: 718 FLEELVYEIKA-AGYVPDTNLILD--VEDDV 745
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 471 KDLHGKI---IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
K+LH I IK G + T L ++K G I + RVF+ + DK + + M++G
Sbjct: 63 KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++ + ++ M + P +L C + + +G K + + N
Sbjct: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRG-KEIHGQLITNSFAAN 181
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
T VV+M ++ ++ +A + MP E D +W ++++G + A++A++ +
Sbjct: 182 VFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAG---FSQNGFAKKALELVL 237
Query: 648 KLAEE--HPAGYVLLSNIYASA 667
++ +E P L++ + A+A
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAA 259
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/584 (35%), Positives = 330/584 (56%), Gaps = 52/584 (8%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
I+ GRV ++ F+R P ++V+SWTA + + + G EA L L + N
Sbjct: 46 IAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASAL---LHRPDARRNV 102
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
VT++++ A + VD AR++FDR
Sbjct: 103 VTWTALLSGYA-----------------------------------RARRVDEARALFDR 127
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M +R+VVSW +L+ + G +G A +FD MP R+ SW++++A +SG +EA RLF
Sbjct: 128 MPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLF 187
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSK 363
+M + N ++ ++S LA RSG A L G+ E++V NA+I Y++
Sbjct: 188 ERMP----ERNVMSWTTMISGLA-----RSGSADEARALFDGMPERNVVSWNAMISGYAR 238
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
+ +F ++ E+DVA SWN MI G+ N +++A+ELFD MPKRN VSW+ ++
Sbjct: 239 NLRIDEALDLFMNMPERDVA---SWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMM 295
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+G L+ + ++ VFN ML+ G PN+ TF + A +++A L +G+ +H I K F
Sbjct: 296 NGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQ 355
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+D F+ ++L YAK G+I +R+VFD +K+ ISW M+ A G E+I L+E+M
Sbjct: 356 FDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKM 415
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
++ PN++T + +L ACSHSGLVD+GL+ F M +I HY+C++D+ SR+GR
Sbjct: 416 QENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGR 475
Query: 604 LSEAEDFINSMPFEPDSNA-WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L +A+ IN + +P S+ W++LL GC + NE I + A +NL + ++ Y LLSN
Sbjct: 476 LDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLSN 535
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
IYASAG+W +A +R M ++GL+K GCSW+E+ N+VH F +
Sbjct: 536 IYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELANKVHVFVAR 579
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 243/530 (45%), Gaps = 59/530 (11%)
Query: 29 KDITSQNLVIQGRALHGHLIKTG--IHK---ERYLTT--RLLIMYLGSRKSLEANEIVKD 81
+D+ S ++ A G L + +H+ R + T LL Y +R+ EA +
Sbjct: 68 RDVVSWTAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSGYARARRVDEARALFDR 127
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+ ++V N M+ A G + A LFDGMP R+ SW L++ ++ G ++E+ F
Sbjct: 128 MPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLF 187
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
ER P +NV+SWT I G ++G + EA LF G+
Sbjct: 188 ERMPERNVMSWTTMISGLARSGSADEARALF-----DGMP-------------------- 222
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
E++V N++I+ + +D A +F M +RDV SW +++ FI
Sbjct: 223 --------------ERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFI 268
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ DL +A+ +FDEMP+RN VSW+ M+ Q E A ++F M +PN F
Sbjct: 269 QNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLG 328
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+ A ++L L G VH + K + D FI ++L+ LY+KCGE + R VFD EKD
Sbjct: 329 AVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKD 388
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFA 437
V+SWN MI Y +G EA L++ M K NDV++ ++S D
Sbjct: 389 ---VISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLR 445
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVAS-LEKGKDL-HGKIIKL--GFPYDVFLGTALT 493
+F M I + S L S A L+ K L +G +K + LG
Sbjct: 446 IFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNA 505
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
GD+ ++R + + PD N ++T++ A +G KE+ + EM
Sbjct: 506 HGNESIGDL-AARNLLEAEPD-NAGTYTLLSNIYASAGKWKEAAKIRSEM 553
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 323/589 (54%), Gaps = 66/589 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + + R++ + FE P ++ +++ I G+ ++G E++ LFLK+ +SG +P+
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ TFS + KA ++DF LG + L GF + SV N
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ------------------- 290
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
ILD + + + E R +FDEMPE + VS++V+I+ Y+Q+ E +
Sbjct: 291 ------------ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR+M F F+ +LS A+L +L+ G +H L + + + N+L+D+Y+K
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C EEA+ +F ++P+R VSW+A+I
Sbjct: 399 CE----------------------------------MFEEAELIFKSLPQRTTVSWTALI 424
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
SGY++ +F +M S ++STF++VL ASAS ASL GK LH II+ G
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+VF G+ L D YAK G I+ + +VF+ MPD+N +SW ++ A++G + +I F +M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
++ + P+ ++IL VL ACSH G V++G +YF +M PIY I P +HY C++D+L R+GR
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EHPAGYVLLSN 662
+EAE ++ MPFEPD W+S+L+ C+ +KN+ +AERA + L+ + + A YV +SN
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSN 664
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
IYA+AG W +V+K M E+G++K SWVEV +++H F +P
Sbjct: 665 IYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 250/562 (44%), Gaps = 83/562 (14%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+K D N ++ ++ G + A++++D MP +N VS +ISG +K G V +
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACA 195
F+ P + V++WT + + +N EA KLF ++ S P+ VTF+++ C
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ V K GF+ N +T+S V
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDT-----NPFLTVS------------------------NV 189
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L + E+ L A +F+E+PE++ V+++ +I Y + G E+ LF +M + +P+
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
FS VL A+ L G +HA + G +D + N ++D YSK + R++FD
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ E D VS+N +IS Y + Q++
Sbjct: 310 EMPELD---FVSYN-------------------------------VVISSYSQADQYEAS 335
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F EM G F+++L +A+++SL+ G+ LH + + + +G +L D
Sbjct: 336 LHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDM 395
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
YAK E + +F +P + +SWT ++ G + G + LF +M +++ ++ T
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 556 LSVLFACSH--SGLVDKGLKYF----NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
+VL A + S L+ K L F ++E +++ + +VDM ++ G + +A
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFS-------GSGLVDMYAKCGSIKDAVQ 508
Query: 610 FINSMPFEPDSNA--WASLLSG 629
M PD NA W +L+S
Sbjct: 509 VFEEM---PDRNAVSWNALISA 527
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + + G+ LH + TG ++ + ++L Y + LE + ++ D
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALIS-----GFMKHGR---- 133
V +N +I++ Q E + F M +R + ++S ++ GR
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 134 --------------------------VEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
EE+ F+ P + +SWTA I G+VQ G
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
LKLF K+ S ++ ++ TF+++ KA A LG + I ++G ++V + L+
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVS 283
+ K G + A VF+ M R+ VSW ++ + GD A F +M E + VS
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
++ + G+ E+ F+ M+ Y P ++ +L L
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 47/212 (22%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
I+ GNLE N S + L+ + K G +++++ FE P +N +SW A I
Sbjct: 479 IRSGNLE------------NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
NG A+ F K++ESG++P+ V+ + AC+ G F +
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM------- 579
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
++ K+ + +LD+ G EA ++ DEMP
Sbjct: 580 ---------------------SPIYGITPKKK--HYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 278 -ERNEVSWSVMI----ARYNQSGYPEEAFRLF 304
E +E+ WS ++ NQS A +LF
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLF 648
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
S A+ + + +IIK GF D + + + G + ++R+V+D MP KN +S
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 523 MVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M+ G ++G + +LF+ M ++T +T TIL +A + D+ K F M
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVT---WTILMGWYA--RNSHFDEAFKLFRQM--- 136
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
R +C + PD + +LL GC N+ + +
Sbjct: 137 ------CRSSSCTL----------------------PDHVTFTTLLPGC----NDAVPQN 164
Query: 642 AVKNLWKLA 650
AV + A
Sbjct: 165 AVGQVHAFA 173
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/679 (32%), Positives = 356/679 (52%), Gaps = 73/679 (10%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T LL Y S EA + + + V +N +++ +Q G L EA +LF+ MPERN V
Sbjct: 14 TSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVV 73
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SWT+++ G G++ E+ FE P +NV+SW A I G ++NG EA +
Sbjct: 74 SWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNG-DLEAAR--------- 123
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
++F K+ + N +I + G ++ AR
Sbjct: 124 -----------------------------MVFDESPVKNAASWNGMIAGYAENGRMEEAR 154
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
++FD ME R+V++WT ++ + G++ E +F MP+RN VSW+ MI + +G+ E+
Sbjct: 155 ALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWTAMIGGFTWNGFYED 214
Query: 300 AFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF---ISN 355
A LF +M R + PN F + A A L R G +HA ++ G++ D + +S
Sbjct: 215 ALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRLSK 274
Query: 356 ALIDLYSKCGETKDGRLVFD---------------------SIVEK--------DVAHVV 386
LI +YS G +F+ +++K V +
Sbjct: 275 GLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKI 334
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+W SMI GY + G + EA LF MP+++ V+W+ +ISG++ ++ F +F+EML G
Sbjct: 335 TWTSMIDGYLVIGNVSEACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQG 394
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P ST++ + A+ +VASL++G+ LH + K D+ L +L YAK G+I ++
Sbjct: 395 VRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNAY 454
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
R+F +M + ISW M+ G + G A E++ +FE M + PN +T L VL ACSH+G
Sbjct: 455 RIFSQMISHDLISWNSMIMGFSHHGLANEALEVFEAMVDSGTHPNSVTFLGVLSACSHAG 514
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
L+++G + FN+M ++ ++P HY C+V++L R+G+L EAE+ I +P E + W +L
Sbjct: 515 LINQGWEIFNAMSDVFAVQPGLEHYICMVNLLGRAGKLKEAEELILGLPLERNHAIWGAL 574
Query: 627 LSGCK-TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
L C + KN IA+RA + +L + +VLL NIYA++G+ I+ +RK M KG+
Sbjct: 575 LGVCSFSEKNADIAKRAATRILELDPLNAPAHVLLCNIYAASGQHIEEHKLRKEMGLKGV 634
Query: 686 RKSGGCSWVEVRNQVHFFF 704
+K GCSW+ + +VH F
Sbjct: 635 KKVPGCSWIVLNGRVHVFL 653
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 244/500 (48%), Gaps = 66/500 (13%)
Query: 6 RSLFSINPETSFNSY------------IETCLCLLKDITSQNLVIQGRALHGHLIKTGIH 53
R+LF I PE + SY + + L +++ +N+V L G I
Sbjct: 30 RALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVVSWTSMLCGLADAGKIC 89
Query: 54 KERYLTTRL----------LIMYLGSRKSLEANEIVKDLNGF-DLVVHNCMINANIQWGN 102
+ + L + +I+ L LEA +V D + + N MI + G
Sbjct: 90 EAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEAARMVFDESPVKNAASWNGMIAGYAENGR 149
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
+EEA+ LFD M +RN ++WT+++SG+ + G VEE F P +N++SWTA I GF N
Sbjct: 150 MEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWTAMIGGFTWN 209
Query: 163 GFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH--- 218
GF +AL LFL++ + PN TF S+ ACA + RLG + + G +
Sbjct: 210 GFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYD 269
Query: 219 --------------------------------VSVCNSLITLSLKMGEVDLARSVFDRME 246
V CN +I +++G +D A+++FD M
Sbjct: 270 GRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMP 329
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
RD ++WT ++D ++ +G++ EA +F MPE++ V+W+ MI+ + ++ EA LF +
Sbjct: 330 VRDKITWTSMIDGYLVIGNVSEACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSE 389
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M +P +S ++I+ A ++ +L G +HA + K + D+ + N+LI +Y+KCGE
Sbjct: 390 MLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGE 449
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAI 422
++ +F ++ D ++SWNSMI G+ +G EA E+F+ M N V++ +
Sbjct: 450 IRNAYRIFSQMISHD---LISWNSMIMGFSHHGLANEALEVFEAMVDSGTHPNSVTFLGV 506
Query: 423 ISGYLEHKQFDLVFAVFNEM 442
+S + + +FN M
Sbjct: 507 LSACSHAGLINQGWEIFNAM 526
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 182/409 (44%), Gaps = 71/409 (17%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERY---LTTRLLIMYLGSRKSLEANE 77
IET + L G+ LH LI G+ + Y L+ L+ MY S ++
Sbjct: 232 IETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMY-SSIGFMDYAH 290
Query: 78 IVKDLNGFDLVVHNC--MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
+ + N VV +C MIN I+ G L++AQ LFD MP R++++WT++I G++ G V
Sbjct: 291 YIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVS 350
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
E+ F P ++ ++WT I G V+N EA LF ++L GV+P T++ + A
Sbjct: 351 EACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAG 410
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ G + ++ K + + + NSLI++ K GE+ A +F +M D++SW
Sbjct: 411 AVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISW-- 468
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+ MI ++ G EA +F M PN
Sbjct: 469 -----------------------------NSMIMGFSHHGLANEALEVFEAMVDSGTHPN 499
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ F VLSA + HA ++ G E I NA+ D+++
Sbjct: 500 SVTFLGVLSACS-----------HAGLINQGWE----IFNAMSDVFA------------- 531
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAII 423
V+ + H + M+ G G+++EA+EL +P +RN W A++
Sbjct: 532 --VQPGLEHYI---CMVNLLGRAGKLKEAEELILGLPLERNHAIWGALL 575
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/663 (32%), Positives = 348/663 (52%), Gaps = 77/663 (11%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V +N M++A + G ++EA+ LFDGMP RN VSW A+I+ HGRV ++ F+R P +
Sbjct: 50 VTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVR 109
Query: 148 NVISWT--------------------------------AAICGFVQNGFSFEALKLFLKL 175
+ SWT A I G+ +NG +A+KL ++
Sbjct: 110 DEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREM 169
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK---------AGFEK--------- 217
P+ V+++S + + + F + K AGF +
Sbjct: 170 ----PAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASS 225
Query: 218 --------HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+V +L+ + G + AR +FDRM +R+VV+W V+LD ++ + + EA
Sbjct: 226 FFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEA 285
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
++FDEMP +N +SW+ +I+ ++G +EA L +M+ T+ L +
Sbjct: 286 CKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMAD 345
Query: 330 KALR--SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
A R GM VH D N +I Y +CG ++ L+F + KD+ VS
Sbjct: 346 DARRIFDGMEVH----------DTVCWNTMISGYVQCGILEEAMLLFQRMPNKDM---VS 392
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN+MI GY +GQM +A +F M +RN VSW+++ISG++++ +F F M
Sbjct: 393 WNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTN 452
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
+ ST++S L A A++A L G+ LH +++ G D F G AL TYAK G I +++
Sbjct: 453 RADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQ 512
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+FD M K+ +SW ++ G A +G E+I +F EME + P+E+T + +L ACSH+GL
Sbjct: 513 IFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGL 572
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+D+GL +F SM Y +KP HY C+VD+L R+G+L+EA + + M +P++ W +LL
Sbjct: 573 IDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALL 632
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
C +KN ++A+ A + L +L + YVLLSNI A AG+W ++ R + EKG+ K
Sbjct: 633 GACHMHKNHELAQLAAERLSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNK 692
Query: 688 SGG 690
G
Sbjct: 693 PPG 695
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 211/447 (47%), Gaps = 73/447 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
++KD+TS NL++ G ++TG A+ + +
Sbjct: 200 MVKDMTSWNLMLAG------FVRTGDLN-------------------AASSFFAKIESPN 234
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
++ ++N + G + +A+ LFD MPERN V+W ++ G++ +EE+ F+ P
Sbjct: 235 VISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPI 294
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF--RLGL 204
+N ISWT I G + G KL E+ ++++F+ + A ++ + R
Sbjct: 295 KNSISWTTIISGLARAG----------KLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMA 344
Query: 205 SVFGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
IF G E H +VC N++I+ ++ G ++ A +F RM +D+VSW ++ + +
Sbjct: 345 DDARRIFD-GMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQD 403
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G + +A IF M RN VSW+ +I+ + Q+ +A F M R + + + S ++ L
Sbjct: 404 GQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCL 463
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A A+L L G +H +++ G D F NALI Y+KCG + + +FD +V KD
Sbjct: 464 RACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKD-- 521
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+VSWN++I GY NGQ EA AVF EM
Sbjct: 522 -IVSWNALIDGYASNGQGTEA-------------------------------IAVFREME 549
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKG 470
+G P++ TF +L A + +++G
Sbjct: 550 ANGVRPDEVTFVGILSACSHAGLIDEG 576
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 224/507 (44%), Gaps = 61/507 (12%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N +T + G++ AR +FD M R+ V++ +L G + EAR +FD MP RN V
Sbjct: 22 NKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTV 81
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMT---RYSFKPNTSCFSIVLSALASLKALRSG-MHV 338
SW+ MIA + G +A LF +M +S+ SC++ R G + +
Sbjct: 82 SWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYA------------RGGDLEL 129
Query: 339 HAHVL-KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
VL ++ +K NA+I Y+K G D + + D +VSWNS + G
Sbjct: 130 ARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPD---LVSWNSALAGLTQ 186
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+G+M A + FD M K + SW+ +++G++ + + F ++ E PN ++ ++
Sbjct: 187 SGEMVRAVQFFDEMVK-DMTSWNLMLAGFVRTGDLNAASSFFAKI----ESPNVISWVTL 241
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L + +DL ++ + +V + D Y IE + ++FD MP KN
Sbjct: 242 LNGYCRAGRIADARDLFDRMPE----RNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNS 297
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
ISWT ++ GLA +G +E+ +L ++M + + L + D + F+
Sbjct: 298 ISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYL----QRNMADDARRIFDG 353
Query: 578 MEPIYNIKPNGRHYT-CVVDMLS---RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
ME H T C M+S + G L EA MP D +W ++++G Y
Sbjct: 354 MEV---------HDTVCWNTMISGYVQCGILEEAMLLFQRMP-NKDMVSWNTMIAG---Y 400
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM---TEKG------ 684
+ +A+ ++ + + + + + R++DA++ LM T +
Sbjct: 401 AQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYA 460
Query: 685 --LRKSGGCSWVEVRNQVHFFFQKTDH 709
LR + + V Q+H ++ H
Sbjct: 461 SCLRACANLAVLHVGRQLHNLLVRSGH 487
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/760 (29%), Positives = 387/760 (50%), Gaps = 116/760 (15%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL + + G +H H+ K+G+ + + L+ +Y R A ++V + + D
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPD 121
Query: 87 LVVHNCMINANIQWG-------------------------NLEEAQRLFDGMPERNEVSW 121
LV + +I+ Q G ++ +A + + +V
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181
Query: 122 TALISGF-----------MKHGRVEE---SMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
++SGF + + + +E S F+ P +NV+SW A +VQ F E
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGE 241
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
A+ LF +++ SG+KPNE + SS+ AC + D G + G + K G++ N+L+
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVD 301
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVIL------------------------------ 257
+ K+G++ A SVF+++++ D+VSW ++
Sbjct: 302 MYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKM 361
Query: 258 ----DVFIEMG--------DLGE-ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
D+F+ +G DL E AR F+ +PE++ ++W+ +I+ Y+Q EA LF
Sbjct: 362 DMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLF 421
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
+M + N + S +L + A L+ + VH +K G D+++ N+LID Y KC
Sbjct: 422 VEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKC 481
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
+D +F+ E + +VS+ SMI Y GQ EEA +L
Sbjct: 482 SHVEDAERIFE---ECTIGDLVSFTSMITAYAQYGQGEEALKL----------------- 521
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
+LE + +L P++ SS+L A A++++ E+GK LH I+K GF
Sbjct: 522 -FLEMQDMELK-------------PDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 567
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D+F G +L + YAK G I+ + R F + ++ +SW+ M+ GLA+ G+ ++++ LF +M
Sbjct: 568 DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML 627
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
K ++PN +T++SVL AC+H+GLV + YF SME ++ KP HY C++D+L R+G++
Sbjct: 628 KEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKI 687
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
+EA + +N MPFE +++ W +LL + +K+ ++ RA + L+ L E +VLL+NIY
Sbjct: 688 NEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIY 747
Query: 665 ASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
ASAG+W + VR+LM + ++K G SW+EV+++V+ F
Sbjct: 748 ASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFL 787
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 228/532 (42%), Gaps = 87/532 (16%)
Query: 8 LFSINP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
L I P E S +S + C L +D + +G+ +HG+LIK G + + L+ MY
Sbjct: 251 LSGIKPNEFSLSSMVNACTGL-RDSS------RGKIIHGYLIKLGYDWDPFSANALVDMY 303
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW----- 121
+A + + + D+V N +I + + E+A L M + S
Sbjct: 304 AKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDM 363
Query: 122 -------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
L+ + K +E++ F P +++I+W A I G+ Q EAL LF++
Sbjct: 364 ESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVE 423
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ + G+ N+ T S+I K+ A + + V GL K+GF + V NSLI
Sbjct: 424 MHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI-------- 475
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
D + + + +A RIF+E + VS++ MI Y Q
Sbjct: 476 -----------------------DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 512
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G EEA +LF +M KP+ S +L+A A+L A G +H H+LK G D+F
Sbjct: 513 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG 572
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
N+L+++Y+KCG D F + E+ +VSW++MIGG +G +A +L
Sbjct: 573 NSLVNMYAKCGSIDDAGRAFSELTERG---IVSWSAMIGGLAQHGHGRQALQL------- 622
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
FN+ML G PN T SVL A + + K
Sbjct: 623 ------------------------FNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYF 658
Query: 475 GKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ +L GF + D ++G I + + ++MP + N W ++
Sbjct: 659 ESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL 710
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 196/462 (42%), Gaps = 95/462 (20%)
Query: 173 LKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
L L++ G P V++S + C R GL + I K+G S+ N LI L K
Sbjct: 44 LNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSK 103
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
AR + D + D+VSW S +I+ Y
Sbjct: 104 CRXFGYARKLVDESSEPDLVSW-------------------------------SALISGY 132
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q+G A F +M K N FS VL A + +K LR G VH V+ G E DV
Sbjct: 133 AQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDV 192
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
F++N L+ +Y+KC E D + +FD I E++ VVSWN
Sbjct: 193 FVANTLVVMYAKCDEFLDSKRLFDEIPERN---VVSWN---------------------- 227
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
A+ S Y++ +F EM+LSG PN+ + SS++ A + +GK
Sbjct: 228 ---------ALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+HG +IKLG+ +D F AL D YAK GD+ + VF+++ + +SW ++ G
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE 338
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ ++++ L +M++ HS L+ ME +
Sbjct: 339 HHEQALELLGQMKRQ----------------LHSSLMKM------DMESDLFVSVG---- 372
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+VDM S+ L +A N +P E D AW +++SG Y
Sbjct: 373 --LVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISGYSQY 411
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 168/332 (50%), Gaps = 42/332 (12%)
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+F P + +S +LS + K+LR G+ +HAH+ K G+ D I N LI+LYSKC
Sbjct: 51 NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYA 110
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
R + D E D +VSW+++I GY NG + A+++
Sbjct: 111 RKLVDESSEPD---LVSWSALISGYAQNG-----------------LGGGALMA------ 144
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
F+EM L G N+ TFSSVL A + V L GK +HG ++ GF DVF+
Sbjct: 145 --------FHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVAN 196
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
L YAK + S+R+FD +P++N +SW + + + E++ LF EM + I P
Sbjct: 197 TLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKP 256
Query: 551 NELTILSVLFACSHSGLVDKG---LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
NE ++ S++ AC +GL D + + ++ Y+ P +VDM ++ G L++A
Sbjct: 257 NEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSA--NALVDMYAKVGDLADA 312
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
+ +PD +W ++++GC +++ + A
Sbjct: 313 ISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQA 343
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 311/574 (54%), Gaps = 36/574 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE N + W I G + +L L++ ++ G+ PN TF + K+CA+ F
Sbjct: 21 FETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTF 80
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + G + K GF+ + V SLI++ ++ ++ A VFDR RDVVS+T ++ +
Sbjct: 81 TEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGY 140
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
GD+ A+++FDE+P ++ VSW+ MI+ Y ++G +EA LF +M + + +P+ S +
Sbjct: 141 ASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYV 200
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VLSA A ++ G VH+ V G + ++ I NALIDLYSKCGE
Sbjct: 201 TVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGE-------------- 246
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+E A LF + ++ +SW+ +I GY + +F
Sbjct: 247 --------------------VETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQ 286
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAK 498
EML SGE PN T SVL A A + +++ G+ +H I K G L T+L D YAK
Sbjct: 287 EMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 346
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
GDIE++ +VF+ M K+ SW M+ G A G A S +LF M K I P+++T + +
Sbjct: 347 CGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGL 406
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSHSG++D G F SM Y + P HY C++D+L SG EAE+ IN+M EP
Sbjct: 407 LSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEP 466
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
D W SLL CK + N ++AE +NL K+ E+P+ Y+LLSNIYASAGRW D +R
Sbjct: 467 DGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRA 526
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
L+ K ++K GCS +EV + V F +P+
Sbjct: 527 LLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQ 560
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 195/365 (53%), Gaps = 5/365 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A +F+ + E N++ W+ MI + S P + L+ M PN+ F +L +
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A K G +H VLK+G + D+++ +LI +Y + +D VFD +D V
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD---V 130
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ ++I GY G + A++LFD +P ++ VSW+A+ISGY E + +F EM+
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P++ST+ +VL A A S+E G+ +H + GF ++ + AL D Y+K G++E++
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+F + K+ ISW ++ G KE++ LF+EM ++ TPN++T+LSVL AC+H
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHL 310
Query: 566 GLVDKGLKYFNSMEP-IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
G +D G ++ + + T ++DM ++ G + A NSM ++W
Sbjct: 311 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWN 369
Query: 625 SLLSG 629
+++ G
Sbjct: 370 AMIFG 374
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 196/422 (46%), Gaps = 71/422 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +G+ +HG ++K G D
Sbjct: 70 LLKSCAKSKTFTEGQQIHGQVLKLGF-------------------------------DLD 98
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L VH +I+ +Q LE+A ++FD R+ VS+TALI+G+ G + + F+ P
Sbjct: 99 LYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPV 158
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW A I G+ + G EAL+LF ++++ V+P+E T+ ++ ACA LG V
Sbjct: 159 KDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQV 218
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ GF+ ++ + N+LI L K GEV+ A +F + +DV+SW ++ + M
Sbjct: 219 HSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHM--- 275
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+EA LF++M R PN VL A
Sbjct: 276 ----------------------------NLYKEALLLFQEMLRSGETPNDVTMLSVLPAC 307
Query: 327 ASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L A+ G +H ++ K G+ + +LID+Y+KCG+ + VF+S++ K ++
Sbjct: 308 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLS- 366
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAVFN 440
SWN+MI G+ ++G+ + + +LF M K +D+++ ++S DL +F
Sbjct: 367 --SWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFR 424
Query: 441 EM 442
M
Sbjct: 425 SM 426
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/612 (33%), Positives = 335/612 (54%), Gaps = 65/612 (10%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G + A+++FD +P+ W +I G+ R+
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGY---SRINHP----------------------- 88
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
QNG S ++L +L S +KP+ TF + K + G + K GF+ ++
Sbjct: 89 QNGVS-----MYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V + I + VDLAR VFD MGD E
Sbjct: 144 VQKAFIHMFSLCRLVDLARKVFD-------------------MGDAWEV----------- 173
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
V+W++M++ YN+ +++ LF +M + PN+ ++LSA + LK L G H++
Sbjct: 174 -VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
++ +E+++ + N LID+++ CGE + + VFD++ +DV +SW S++ G+ GQ
Sbjct: 233 YINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDV---ISWTSIVTGFANIGQ 289
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
++ A++ FD +P+R+ VSW+A+I GYL +F A+F EM +S P++ T S+L A
Sbjct: 290 IDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTA 349
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
A + +LE G+ + I K D F+G AL D Y K G++ +++VF M K++ +W
Sbjct: 350 CAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTW 409
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T M+ GLA +G+ +E++ +F M + SITP+E+T + VL AC+H+G+V+KG +F SM
Sbjct: 410 TAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTM 469
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+ IKPN HY C+VD+L R+GRL EA + I +MP +P+S W SLL C+ +KN Q+AE
Sbjct: 470 QHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAE 529
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
A K + +L E+ A YVLL NIYA+ RW + VRKLM E+G++K+ GCS +E+ V
Sbjct: 530 MAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNV 589
Query: 701 HFFFQKTDHNPK 712
+ F +P+
Sbjct: 590 YEFVAGDQSHPQ 601
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 209/449 (46%), Gaps = 71/449 (15%)
Query: 76 NEIVKDLNGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
N VK +GFD L V I+ ++ A+++FD V+W ++SG+ R
Sbjct: 131 NHAVK--HGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGY---NR 185
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
V++ F+++ LF+++ + GV PN VT + A
Sbjct: 186 VKQ----FKKSKM------------------------LFIEMEKRGVSPNSVTLVLMLSA 217
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C+++ D G ++ I E+++ + N LI + GE+D A+SVFD M+ RDV+SW
Sbjct: 218 CSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISW 277
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T I+ F +G + AR+ FD++PER+ VSW+ MI Y + EA LFR+M + K
Sbjct: 278 TSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVK 337
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ +L+A A L AL G V ++ K I+ D F+ NALID+Y KCG + V
Sbjct: 338 PDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKV 397
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F + KD +W +MI G +NG EEA
Sbjct: 398 FKEMHHKD---KFTWTAMIVGLAINGHGEEA----------------------------- 425
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH-GKIIKLGFPYDVFLGTAL 492
A+F+ M+ + P++ T+ VLCA +EKG+ ++ G +V +
Sbjct: 426 --LAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCM 483
Query: 493 TDTYAKSGDIESSRRVFDRMPDK-NEISW 520
D ++G +E + V MP K N I W
Sbjct: 484 VDLLGRAGRLEEAHEVIVNMPVKPNSIVW 512
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 182/373 (48%), Gaps = 15/373 (4%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
E G + AR++FD +P+ W+ MI Y++ +P+ ++ M + KP+ F
Sbjct: 53 ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPF 112
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+L AL+ G + H +K G + ++F+ A I ++S C R VFD D
Sbjct: 113 LLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDM---GD 169
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFA 437
VV+WN M+ GY Q +++K LF M KR N V+ ++S + K +
Sbjct: 170 AWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKH 229
Query: 438 VFNEMLLSGEIPNKSTFSSVLCAS-ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
++ + + G + +VL A+ +++ + + + DV T++ +
Sbjct: 230 IY-KYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKN----RDVISWTSIVTGF 284
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
A G I+ +R+ FD++P+++ +SWT M+ G E++ LF EM+ +++ P+E T++
Sbjct: 285 ANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMV 344
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
S+L AC+H G ++ G ++ + +IK + ++DM + G + +A+ M
Sbjct: 345 SILTACAHLGALELG-EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM-H 402
Query: 617 EPDSNAWASLLSG 629
D W +++ G
Sbjct: 403 HKDKFTWTAMIVG 415
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 165/384 (42%), Gaps = 72/384 (18%)
Query: 58 LTTRLLIMYLGSRKSLEANE-IVKDLNG----FDLVVHNCMINANIQWGNLEEAQRLFDG 112
+T L++ K LE + I K +NG +L++ N +I+ G ++EAQ +FD
Sbjct: 209 VTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDN 268
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
M R+ +SWT++++GF G+++ + YF++ P ++ +SWTA I G+++ EAL LF
Sbjct: 269 MKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALF 328
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
++ S VKP+E T SI ACA + LG V I K + V N+LI + K
Sbjct: 329 REMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKC 388
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
G V A+ VF M +D +WT MI
Sbjct: 389 GNVGKAKKVFKEMHHKDKFTWT-------------------------------AMIVGLA 417
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH-AHVLKIGIEKDV 351
+G+ EEA +F M S P+ + VL A + G + ++ GI+ +V
Sbjct: 418 INGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNV 477
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
++DL + G ++EEA E+ NM
Sbjct: 478 THYGCMVDLLGRAG----------------------------------RLEEAHEVIVNM 503
Query: 412 P-KRNDVSWSAIISGYLEHKQFDL 434
P K N + W +++ HK L
Sbjct: 504 PVKPNSIVWGSLLGACRVHKNVQL 527
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 162/363 (44%), Gaps = 47/363 (12%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+S L K++ +H+H +K+G+ D +I C + G++++
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAF---CCAHESGKMIY-------- 59
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY--LEHKQFDLVFAVFN 440
A+++FD +P+ W+ +I GY + H Q + +++
Sbjct: 60 ---------------------ARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGV--SMYL 96
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
ML S P++ TF +L +L+ GK L +K GF ++F+ A ++
Sbjct: 97 LMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCR 156
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
++ +R+VFD ++W +M+ G K+S LF EMEK ++PN +T++ +L
Sbjct: 157 LVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLS 216
Query: 561 ACSHSGLVDKG---LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
ACS ++ G KY N ++ N ++DM + G + EA+ ++M
Sbjct: 217 ACSKLKDLEGGKHIYKYINGGI----VERNLILENVLIDMFAACGEMDEAQSVFDNMK-N 271
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
D +W S+++G + N + A K ++ E + + + Y R+I+A+ +
Sbjct: 272 RDVISWTSIVTG---FANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALF 328
Query: 678 KLM 680
+ M
Sbjct: 329 REM 331
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/678 (31%), Positives = 360/678 (53%), Gaps = 15/678 (2%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGI-HKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
L++ + S + + +GR LH +KTGI + + RLL +Y R +A+ + ++
Sbjct: 6 LVRTLQSWSTLREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQT 65
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+ N ++ A++ G+ A LF+ MP + SW ++S F K G ++ + F P
Sbjct: 66 NSFSWNTLVQAHLNSGHTHSALHLFNAMPHKTHFSWNMVVSAFAKSGHLQLAHSLFNAMP 125
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF------SSICKACAEIND 199
+N + W + I + ++G +AL LF + + P+++ + ++ ACA+
Sbjct: 126 SKNHLVWNSIIHSYSRHGHPGKALFLFKSM---NLDPSQIVYRDAFVLATALGACADSLA 182
Query: 200 FRLGLSVFGLIF--KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
G V +F G E +C+SLI L K G++D A + + D S + ++
Sbjct: 183 LNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLDSAARIVSFVRDVDEFSLSALI 242
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ G + EAR +FD + V W+ +I+ Y +G EA LF M R + + S
Sbjct: 243 SGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQGDAS 302
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ +LSA + L + +H + K G+ D+ ++++L+D YSKC + +F +
Sbjct: 303 AVANILSAASGLLVVELVKQMHVYACKAGVTHDIVVASSLLDAYSKCQSPCEACKLFSEL 362
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
E D + N+MI Y G++E+AK +F+ MP + +SW++I+ G ++
Sbjct: 363 KEYDT---ILLNTMITVYSNCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALN 419
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+F++M ++ +F+SV+ A A +SLE G+ + GK I +G D + T+L D Y
Sbjct: 420 IFSQMNKLDLKMDRFSFASVISACACRSSLELGEQVFGKAITIGLESDQIISTSLVDFYC 479
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G +E R+VFD M +E+SW M+ G A +GY E++ LF EM + P+ +T
Sbjct: 480 KCGFVEIGRKVFDGMVKTDEVSWNTMLMGYATNGYGIEALTLFCEMTYGGVWPSAITFTG 539
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL AC HSGLV++G F++M+ YNI P H++C+VD+ +R+G EA D I MPF+
Sbjct: 540 VLSACDHSGLVEEGRNLFHTMKHSYNINPGIEHFSCMVDLFARAGYFEEAMDLIEEMPFQ 599
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
D+N W S+L GC + N+ I + A + + +L E+ Y+ LSNI AS+G W + VR
Sbjct: 600 ADANMWLSVLRGCIAHGNKTIGKMAAEQIIQLEPENTGAYIQLSNILASSGDWEGSALVR 659
Query: 678 KLMTEKGLRKSGGCSWVE 695
+LM +K +K GCSW +
Sbjct: 660 ELMRDKHFQKIPGCSWAD 677
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 310/539 (57%), Gaps = 5/539 (0%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK-HVSVCNSL 225
+A+ L + G++ +S+ + C + + G + + GF++ + + N L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + +K G+ A VFD+M R++ SW ++ F++ G L AR +FD MPER+ VSW+
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
M+ Y Q G EA F+++ R K N F+ +L+A + L+ H VL
Sbjct: 149 TMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVA 208
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G +V +S ++ID Y+KCG+ + + FD + KD+ H+ W ++I GY G ME A
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI-HI--WTTLISGYAKLGDMEAAD 265
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
+LF MP++N VSW+A+I+GY+ DL +F +M+ P + TFSS LCASAS+A
Sbjct: 266 KLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIA 325
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMV 524
SL GK +HG +I+ + + ++L D Y+KSG +E+S RVF DK + + W M+
Sbjct: 326 SLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMI 385
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA+ G +++ + ++M K + PN T++ +L ACSHSGLV++G+++F SM + I
Sbjct: 386 SALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGI 445
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P+ HY C++D+L R+G E I MPFEPD + W ++L C+ + NE++ ++A +
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAE 505
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L KL E A Y+LLS+IYA G+W +R +M ++ + K SW+E+ N+V F
Sbjct: 506 ELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIMKKRRVNKEKAVSWIEIENKVKAF 564
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 193/357 (54%), Gaps = 8/357 (2%)
Query: 63 LIMYLGSRKSLEANEIVK---DLNGF---DLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
L+ G KSL+ + + + GF + ++ N +I ++ G +A ++FD M R
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N SW ++SGF+K G + + F+ P ++V+SW + G+ Q+G EAL F +L
Sbjct: 112 NLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELR 171
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
SG+K NE +F+ + AC + +L G + AGF +V + S+I K G+++
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A+ FD M +D+ WT ++ + ++GD+ A ++F EMPE+N VSW+ +IA Y + G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGS 291
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+ A LFR+M KP FS L A AS+ +LR G +H ++++ + + ++++
Sbjct: 292 GDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSS 351
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
LID+YSK G + VF +K V WN+MI +G +A ++ D+M K
Sbjct: 352 LIDMYSKSGSLEASERVFRICYDKQ--DCVLWNTMISALAQHGLGHKALQMLDDMIK 406
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 228/683 (33%), Positives = 352/683 (51%), Gaps = 102/683 (14%)
Query: 25 LCLLKDITS-QNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN 83
L LL S QNL + +H +IKTG+H ++ ++L
Sbjct: 36 LTLLSTCKSFQNL----KQIHSQIIKTGLHNTQFALSKL--------------------- 70
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
+ C I+ +GNL A LF+ + + N+ W +I G
Sbjct: 71 -----IEFCAISP---FGNLSYALLLFESIEQPNQFIWNTMIRG---------------- 106
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
N +S + A+ ++++L GV+PN TF + K+CA++ + G
Sbjct: 107 ----NSLSSSPV-----------GAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG 151
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + K G E V SLI + + GE+ A VF + RD VS+T ++ +
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G L +ARR+F+E+P R+ VSW+ MIA Y QSG EEA F++M R + PN S VL
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVL 271
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA A +L G V + + G+ ++ + NALID+YSKCG+
Sbjct: 272 SACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGD----------------- 314
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+++A++LF+ + +++ +SW+ +I GY + A+F +M
Sbjct: 315 -----------------LDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK--LGFPYDVFLGTALTDTYAKSGD 501
S PN TF S+L A A + +L+ GK +H I K LG + L T+L D YAK G+
Sbjct: 358 QSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGN 416
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
IE++++VF M K+ SW M+ GLA G+A ++ LF +M P+++T + VL A
Sbjct: 417 IEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH+GLV+ G + F+SM Y+I P +HY C++D+L R+G EAE + +M +PD
Sbjct: 477 CSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGA 536
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W SLL C+ + N ++ E A K+L++L E+P YVLLSNIYA+AGRW D +R +
Sbjct: 537 IWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLN 596
Query: 682 EKGLRKSGGCSWVEVRNQVHFFF 704
+KG++K GCS +EV + VH F
Sbjct: 597 DKGMKKVPGCSSIEVDSVVHEFL 619
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 204/460 (44%), Gaps = 83/460 (18%)
Query: 9 FSINPETSFNSYIETCLC-----------LLKDITSQNLVIQGRALHGHLIKTGIHKERY 57
S +P + + Y+ LC LLK +G+ +HGH++K G+ + +
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
+ T L+ MY + + A + + D V +I G L++A+RLF+ +P R+
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
VSW A+I+G+ + GR E EAL F ++
Sbjct: 229 AVSWNAMIAGYAQSGRFE-------------------------------EALAFFQEMKR 257
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
+ V PNE T ++ ACA+ LG V I G ++ + N+LI + K G++D
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDK 317
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR +F+ + ++D++SW V++ + M
Sbjct: 318 ARDLFEGICEKDIISWNVMIGGYSHMNSY------------------------------- 346
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISN 355
+EA LFR+M + + +PN F +L A A L AL G +HA++ K +G+ + +
Sbjct: 347 KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL-TNTSLWT 405
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR- 414
+LID+Y+KCG + + VF + K + SWN+MI G ++G A ELF M
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAGMKPKSLG---SWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 415 ---NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
+D+++ ++S +L F+ M+ +I K
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPK 502
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 333/605 (55%), Gaps = 67/605 (11%)
Query: 109 LFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
L G ERN V +L++ ++K+ RV+ + F+ ++VISW + I G+V NG + +
Sbjct: 222 LKSGFGERNSVG-NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L +F+++L SG++ + T S+ CA+ LG +V KA F + CN+L
Sbjct: 281 LSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTL--- 337
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
LD++ + GDL A+ +F EM R+ VS++ MI
Sbjct: 338 ----------------------------LDMYSKCGDLDSAKVVFREMSGRSVVSYTSMI 369
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
A Y + G EA +LF +M P+ + VL+ A + L G VH + + +
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMG 429
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D+F+SNAL+D+Y+KC G M EA+ +F
Sbjct: 430 FDIFVSNALMDMYAKC----------------------------------GSMREAELVF 455
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASL 467
M ++ +SW+ +I GY ++ + ++FN +L+ P++ T + VL A AS+++
Sbjct: 456 SEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAF 515
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+KG+++HG I++ G+ D + +L D YAK G + +R +FD + K+ +SWTVM+ G
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGY 575
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
G+ KE+I LF +M + I P+E++ +S+L+ACSHSGLVD+G ++FN M I+P
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C+VDML+R+G LS+A FI +MP PD+ W +LL GC+ + + ++AER + ++
Sbjct: 636 VEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVF 695
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L E+ YVL++NIYA A +W + +RK + ++GLRK+ GCSW+E++ +V+ F
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Query: 708 DHNPK 712
NP+
Sbjct: 756 SSNPE 760
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 187/388 (48%), Gaps = 48/388 (12%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
++ GDL EA R+FD++ + W++++ +SG + LF++M + ++
Sbjct: 138 MYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
FS V + +SL+++ G +H ++LK G + + N+L+ Y K R VFD +
Sbjct: 198 FSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT 257
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
E+D V+SWNS+I GY NG E+ +V
Sbjct: 258 ERD---VISWNSIINGYVSNGLAEKG-------------------------------LSV 283
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F +ML SG + +T SV A + G+ +H +K F + L D Y+K
Sbjct: 284 FVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSK 343
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
GD++S++ VF M ++ +S+T M+ G A G A E++ LFEEME+ I+P+ T+ +V
Sbjct: 344 CGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-----TCVVDMLSRSGRLSEAEDFINS 613
L C+ + L+D+G + IK N + ++DM ++ G + EAE +
Sbjct: 404 LNCCARNRLLDEGKRVHEW------IKENDMGFDIFVSNALMDMYAKCGSMREAELVFSE 457
Query: 614 MPFEPDSNAWASLLSGC--KTYKNEQIA 639
M + D +W +++ G Y NE ++
Sbjct: 458 MRVK-DIISWNTVIGGYSKNCYANEALS 484
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 168/375 (44%), Gaps = 41/375 (10%)
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+R+ + + R+ +SG + A +L ++ P T C VL A K+L+ G
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLC--SVLQLCADSKSLKDGKE 115
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
V + G D + + L +Y+ CG+ K+ VFD + + + WN
Sbjct: 116 VDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV---KIEKALFWNI------- 165
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
L + + K D S S +F +M+ SG + TFS V
Sbjct: 166 ---------LMNELAKSGDFSGS---------------IGLFKKMMSSGVEMDSYTFSCV 201
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
+ +S+ S+ G+ LHG I+K GF +G +L Y K+ ++S+R+VFD M +++
Sbjct: 202 SKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDV 261
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
ISW ++ G +G A++ +++F +M + I + TI+SV C+ S L+ G + +
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLG-RAVHC 320
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
R ++DM S+ G L A+ M ++ S+++G Y E
Sbjct: 321 FGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS-VVSYTSMIAG---YAREG 376
Query: 638 IAERAVKNLWKLAEE 652
+A AVK ++ EE
Sbjct: 377 LAGEAVKLFEEMEEE 391
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 143/327 (43%), Gaps = 70/327 (21%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF E + + T +L L+ +G+ +H
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVH----------------------- 420
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
+ ++ N++ GFD+ V N +++ + G++ EA+ +F M ++ +SW +I G
Sbjct: 421 ---EWIKENDM-----GFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGG 472
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF-LKLLESGVKPNEVT 186
+ K N ++ EAL LF L L+E P+E T
Sbjct: 473 YSK-------------------------------NCYANEALSLFNLLLVEKRFSPDERT 501
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+ + ACA ++ F G + G I + G+ V NSL+ + K G + LAR +FD +
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDIT 561
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFR 302
+D+VSWTV++ + G EA +F++M E +E+S+ ++ + SG +E +R
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWR 621
Query: 303 LFRQMTRYSFK--PNTSCFSIVLSALA 327
F M R+ K P ++ ++ LA
Sbjct: 622 FFNIM-RHECKIEPTVEHYACIVDMLA 647
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 316/589 (53%), Gaps = 65/589 (11%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E N TALI + G V + F+ ++++SWT + + +N ++L+LF +
Sbjct: 73 ESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAE 132
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ G PN TF+ + KAC + F +G SV G + K +E + L + +G
Sbjct: 133 MRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYE---------MDLYVGVG- 182
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+LD++ + GD + R+F+EMP+ + + WS MI+RY QS
Sbjct: 183 ---------------------LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQS 221
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
EA LF QM R PN F+ VL + AS++ L+ G VH HVLK+G++ +VF+S
Sbjct: 222 NQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVS 281
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NAL+D+Y+KCG +++ + +LF +P R
Sbjct: 282 NALMDVYAKCG----------------------------------RLDNSMKLFMELPNR 307
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
N+V+W+ +I GY++ D +++ ML ++ T+SSVL A AS+A++E G +H
Sbjct: 308 NEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIH 367
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
+K + DV +G AL D YAK G I+++R VFD + +++EISW M+ G + G
Sbjct: 368 SLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVG 427
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++ F+ M++T PN+LT +S+L ACS++GL+D G YF SM Y I+P HYTC+
Sbjct: 428 EALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCM 487
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
V +L RSG L +A I +P EP+ W +LL C + + + + + + ++ +
Sbjct: 488 VWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDE 547
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
A +VLLSNIYA RW +VRK M KG++K G SW+E + VH+F
Sbjct: 548 ATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYF 596
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 166/354 (46%), Gaps = 36/354 (10%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MP+RN VS+ +I Y QS +E LF ++ R + N F+ +L L S++
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+HA + K+G E + F+ ALID Y+ CG R FD+I KD +VSW M+ Y
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKD---MVSWTGMVACY 117
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
N + +++ +L F EM + G PN TF+
Sbjct: 118 AENDRFQDSLQL-------------------------------FAEMRMVGFNPNHFTFA 146
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
VL A + + GK +HG ++K + D+++G L D Y K GD RVF+ MP
Sbjct: 147 GVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKH 206
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ I W+ M+ A+S ++E++ LF +M + + PN+ T SVL +C+ + G +
Sbjct: 207 DVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVH 266
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + + N ++D+ ++ GRL + +P + W +++ G
Sbjct: 267 CHVLKV-GLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP-NRNEVTWNTMIVG 318
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 223/523 (42%), Gaps = 140/523 (26%)
Query: 73 LEANEIVKDLNG--------FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTAL 124
LEA + K ++G DL V +++ ++G+ + R+F+ MP+ + + W+ +
Sbjct: 155 LEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFM 214
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
IS + Q+ S EA++LF ++ + V PN+
Sbjct: 215 IS-------------------------------RYAQSNQSREAVELFGQMRRAFVLPNQ 243
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
TF+S+ ++CA I + +LG V + K G + +V V N+L+ + K G +D + +F
Sbjct: 244 FTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFME 303
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
+ R+ V+W ++ ++ QSG ++A L+
Sbjct: 304 LPNRNEVTWNTMIVGYV-------------------------------QSGDGDKALSLY 332
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
+ M + + +S VL A ASL A+ G +H+ LK +KDV + NALID+Y+KC
Sbjct: 333 KNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKC 392
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G K+ RLVFD + E+D +SWN+MI GY ++G + EA + F M + V
Sbjct: 393 GSIKNARLVFDMLSERD---EISWNAMISGYSMHGLVGEALKAFQMMQETECV------- 442
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
PNK TF S+L A ++ L+ G++ +++
Sbjct: 443 ------------------------PNKLTFVSILSACSNAGLLDIGQNYFKSMVQ----- 473
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
Y +E +T MV L SG+ +++ L EE+
Sbjct: 474 ----------DYGIEPCME---------------HYTCMVWLLGRSGHLDKAVKLIEEI- 507
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ PN ++L AC VD G+ S + I I P
Sbjct: 508 --PLEPNVKVWRALLGACVIHNDVDLGIM---SAQQILQIDPQ 545
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 46/320 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLG------------------------------- 68
G+++HG ++KT + Y+ LL +Y
Sbjct: 161 GKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQ 220
Query: 69 SRKSLEANEIVKDLN---------GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
S +S EA E+ + F V+ +C N+Q G L G+ V
Sbjct: 221 SNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFV 280
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
S AL+ + K GR++ SM F P +N ++W I G+VQ+G +AL L+ +LE
Sbjct: 281 S-NALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQ 339
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V+ +EVT+SS+ +ACA + LG + L K ++K V V N+LI + K G + AR
Sbjct: 340 VQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR 399
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSG 295
VFD + +RD +SW ++ + G +GEA + F M E N++++ +++ + +G
Sbjct: 400 LVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAG 459
Query: 296 YPEEAFRLFRQMTR-YSFKP 314
+ F+ M + Y +P
Sbjct: 460 LLDIGQNYFKSMVQDYGIEP 479
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 40/303 (13%)
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
MP RN VS+ +I GY++ Q D V +F+ + G N F+++L SV E
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
LH I KLG + F+GTAL D YA G + S+R+ FD + K+ +SWT MV AE+
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFAC-----------SHS-------------- 565
++S+ LF EM PN T VL AC H
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 566 -GLVDKGLKYFNSMEPIYNIKPNGRH----YTCVVDMLSRSGRLSEAEDFINSMP---FE 617
GL+D K+ ++ + + + +H ++ ++ ++S + EA + M
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN----IYASAGRWIDA 673
P+ +AS+L C + +N Q+ ++ ++ K+ + G V +SN +YA GR ++
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLD---GNVFVSNALMDVYAKCGRLDNS 297
Query: 674 MNV 676
M +
Sbjct: 298 MKL 300
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/674 (32%), Positives = 341/674 (50%), Gaps = 95/674 (14%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +H +IKTG+H Y ++L + C+++ +
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKL--------------------------IEFCVLSPH--- 34
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
FDG+P V FE N++ W G
Sbjct: 35 ---------FDGLPYAISV---------------------FETIQEPNLLIWNTMFRGHA 64
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ AL L++ ++ G+ PN TF + K+CA+ FR G + G + K G++ +
Sbjct: 65 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V SLI++ ++ G ++ AR VFD+ RDVVS+T ++ + G + A+++FDE+P ++
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 184
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MI+ Y ++G +EA LF++M + + +P+ S V+SA A ++ G VH+
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G ++ I NALIDLY KCGE
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGE---------------------------------- 270
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+E A LF+ + ++ +SW+ +I GY + +F EML SGE PN T S+L A
Sbjct: 271 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 330
Query: 461 SASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + ++E G+ +H I K G T+L D YAK GDIE++++VFD + +++
Sbjct: 331 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 390
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW M+ G A G A + ++F M K I P+++T + +L ACSHSG++D G F SM
Sbjct: 391 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 450
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ Y I P HY C++D+L SG EAE+ IN+M EPD W SLL CK + N ++
Sbjct: 451 KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 510
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E +NL K+ ++P YVLLSNIYA+AGRW + +R L+ +KG++K GCS +E+ +
Sbjct: 511 GESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDS 570
Query: 699 QVHFFFQKTDHNPK 712
VH F +P+
Sbjct: 571 VVHEFIIGDKFHPR 584
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 153/378 (40%), Gaps = 77/378 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD----- 81
LLK +G+ +HGH++K G + Y+ T L+ MY+ + + +A ++
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153
Query: 82 -------LNGF-------------------DLVVHNCMINANIQWGNLEEAQRLFDGM-- 113
+ G+ D+V N MI+ + GN +EA LF M
Sbjct: 154 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 213
Query: 114 ----PE--------------------RNEVSW-------------TALISGFMKHGRVEE 136
P+ R SW ALI ++K G VE
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ FE +++VISW I G+ EAL LF ++L SG PN+VT SI ACA
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 333
Query: 197 INDFRLGLSVFGLIFK--AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ +G + I K G S SLI + K G+++ A+ VFD + R + SW
Sbjct: 334 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 393
Query: 255 VILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR- 309
++ F G A IF M E +++++ +++ + SG + +FR M
Sbjct: 394 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKED 453
Query: 310 YSFKPNTSCFSIVLSALA 327
Y P + ++ L
Sbjct: 454 YKITPKLEHYGCMIDLLG 471
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/697 (30%), Positives = 357/697 (51%), Gaps = 56/697 (8%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
I RA+H H++ +G ++ RL+ +Y S
Sbjct: 22 IIARAVHAHILTSGFKPNTFILNRLINIYCKS---------------------------- 53
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF--QNVISWTAA 155
N+ A++LFD +P+ + V+ T L+S + G V+ + F P ++ +S+ A
Sbjct: 54 ---SNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAM 110
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL-IFKAG 214
I + AL LF+++ G P+ TFSS+ A + I D + + K G
Sbjct: 111 ITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLG 170
Query: 215 FEKHVSVCNSLITLSLKMGEVDL---------ARSVFDRMEKRDVV--SWTVILDVFIEM 263
SV N+L++ + L AR VFD K + SWT ++ ++
Sbjct: 171 TLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRN 230
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
DL AR + D + +V+W+ MI+ Y + G EEAF FR+M + + ++ ++
Sbjct: 231 DDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLI 290
Query: 324 SALAS----LKALRSGMHVHAHVLKIGIEKD----VFISNALIDLYSKCGETKDGRLVFD 375
SA S + G VH ++L+ +E + ++NALI Y+K + R VFD
Sbjct: 291 SACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFD 350
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ +D+ +SWN+++ GY ++EEA +F MP+RN ++W+ +ISG ++ +
Sbjct: 351 KMPVRDI---ISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEG 407
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+FN+M G P F+ + A + + SL+ G+ +H ++I+LG + G AL
Sbjct: 408 LKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITM 467
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y++ G +ES+ VF MP + +SW M+ LA+ G+ ++I LFE+M K I P+ +T
Sbjct: 468 YSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITF 527
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
L++L AC+H+GL+ +G YF++M Y I P HY ++D+L R+G +A+ I SMP
Sbjct: 528 LTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMP 587
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
FE + W +LL+GC+ + N ++ +A L +L Y++LSN+YA+ G+W +
Sbjct: 588 FEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVAR 647
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VR LM E+G++K GCSWVEV N VH F +P+
Sbjct: 648 VRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPE 684
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/697 (31%), Positives = 354/697 (50%), Gaps = 101/697 (14%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
+++ S +E+C L NL G+ +H H +KTG H ++ T+LL MY
Sbjct: 63 STYASLLESCRTL-------NL---GKQVHAHTLKTGFHGHEFVETKLLQMY-------- 104
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
++G L++A +F MP+RN SWTA++S + HG
Sbjct: 105 -----------------------GRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHG-- 139
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
YFE EAL LF KL + F + K C
Sbjct: 140 -----YFE------------------------EALSLFEKLQLDDIGLEFFVFPVVLKLC 170
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ LG + G++ K + ++ A +F ++VVS+
Sbjct: 171 GGLRVLELGRQLHGVVIK------------------RCADMGSALKIFSGFSVKNVVSYN 212
Query: 255 VILDVFIEMGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEAFRLFRQ-MTRYS 311
++ + E G++ +A+ +FD+M ++ +SW+ MI+ Y + +EA +FR +
Sbjct: 213 TMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEG 272
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ ++ VL+A A + +LR G VHA + G+ + F+ AL+++YSKC + K +
Sbjct: 273 IEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQ 332
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYL 427
L FD + E+D A +WN +I GY Q+E + L M + N +W+ IISG++
Sbjct: 333 LAFDGVTERDTA---TWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHV 389
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
E+ +L +F EM S P+ T +L A A +A++ +GK +H I+ G+ DV
Sbjct: 390 ENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVH 449
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+G AL D YAK G I+ + +V++R+ + N +S M+ A G+ E I LF M
Sbjct: 450 IGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNG 509
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
P+ +T LSVL +C H+G V+ G ++F+ M YN+ P+ +HYTC+VD+LSR+GRL EA
Sbjct: 510 FRPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEA 568
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
+ + +P +PDS W +LL GC + N ++ E A ++L +L + YVLL+N+YA A
Sbjct: 569 YELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYA 628
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
GRW D R+++ ++G+ KS GCSW+E R +H F
Sbjct: 629 GRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFL 665
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
LL +I + ST++S+L S +L GK +H +K GF F+ T L Y + G +
Sbjct: 55 LLDKQI-DSSTYASLL---ESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCL 110
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ + VF +MP +N SWT ++ + GY +E+++LFE+++ I VL C
Sbjct: 111 DDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLC 170
Query: 563 SH----------SGLVDKGLKYFNSMEPI---YNIKPNGRHYTCVVDMLSRSGRLSEAED 609
G+V K S I +++K N Y ++ +G + +A++
Sbjct: 171 GGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVK-NVVSYNTMIVGYCENGNVEKAKE 229
Query: 610 FINSMPF-EPDSNAWASLLSG 629
+ M D+ +W S++SG
Sbjct: 230 LFDQMELVGKDTISWNSMISG 250
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 11/204 (5%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF+ +S I T +L + +G+ +H H I+ G + ++ L+ MY
Sbjct: 400 LFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYA 459
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTA 123
A ++ ++ +LV N M+ A G+ +E LF M + V++ +
Sbjct: 460 KCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLS 519
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVIS----WTAAICGFVQNGFSFEALKLFLKLLESG 179
++S + G VE +F+ + NV +T + + G EA +L K+
Sbjct: 520 VLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPR-- 577
Query: 180 VKPNEVTFSSICKACAEINDFRLG 203
KP+ V + ++ C + LG
Sbjct: 578 -KPDSVMWGALLGGCVIWGNVELG 600
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 313/571 (54%), Gaps = 37/571 (6%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFR 201
RNP N SW AI GF+ + EA+ L+ ++L+ G KP+ T+ + KACA ++ R
Sbjct: 67 RNP--NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 124
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + G + GF+ + V N++I L +
Sbjct: 125 MGSEILGHVLHLGFDSDIFVSNAVIHL-------------------------------LV 153
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
GDL AR++FD+ R+ VSW+ MI Y + G+ EA +R+M KP+
Sbjct: 154 SCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIG 213
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
V+S+ A L+ L G H ++ + G++ V ++NAL+D+Y KCG + R +FDS+ K
Sbjct: 214 VVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT 273
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+ VSW +M+ GY +G ++ A +LFD MP ++ V W+A+I GY+ + A+FNE
Sbjct: 274 M---VSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNE 330
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M P++ T S L A + + +L+ G +H I K +V LGTAL D YAK G
Sbjct: 331 MQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGK 390
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
I + +VF +P +N ++WT ++ GLA G A +I F EM S+ P+E+T L +L A
Sbjct: 391 ITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSA 450
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C H GLV++G KYF+ M +N+ P +HY+C+VD+L R+G L EAE+ I SMP E D+
Sbjct: 451 CCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAV 510
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +L C+ + N + ERA L ++ YVLL+N+Y A W +A RKLM
Sbjct: 511 VWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMR 570
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++G+ K+ GCS +EV V+ F + +P+
Sbjct: 571 QRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQ 601
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 200/403 (49%), Gaps = 36/403 (8%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A+I + G ++ + F+++ ++++SW + I G+V+ G+++EAL + ++ G+KP
Sbjct: 147 AVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKP 206
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+EVT + +CA++ D LG I + G + V + N+L+ + +K G ++ AR +F
Sbjct: 207 DEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLF 266
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D M + +VSWT ++ + + G L A ++FDEMP+++ V W+ MI Y + +EA
Sbjct: 267 DSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALA 326
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF +M + P+ LSA + L AL G+ +H ++ K + +V + ALID+Y+
Sbjct: 327 LFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYA 386
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ VF + ++ ++W ++I G L+G A
Sbjct: 387 KCGKITKAIQVFQELPGRN---SLTWTAIISGLALHGNAHGA------------------ 425
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLG 481
A F+EM+ + +P++ TF +L A +E+G+ ++ K
Sbjct: 426 -------------IAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFN 472
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVM 523
+ + + D ++G +E + + MP + + + W +
Sbjct: 473 LSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGAL 515
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 187/410 (45%), Gaps = 68/410 (16%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFS 320
E DL I N SW+V I + S P EA L++++ + KP+ +
Sbjct: 52 EWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYP 111
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ A A L +R G + HVL +G + D+F+SNA+I L CG+ R +FD +
Sbjct: 112 LLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR 171
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D +VSWNSMI GY G EA +
Sbjct: 172 D---LVSWNSMINGYVRRGWAYEA-------------------------------LNFYR 197
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM + G P++ T V+ + A + L+ G++ H I + G V L AL D Y K G
Sbjct: 198 EMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCG 257
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGY---------------------------- 532
++ES+R++FD M +K +SWT MV G A+SG
Sbjct: 258 NLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVH 317
Query: 533 ---AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
KE++ LF EM+ +I P+E+T++S L ACS G +D G+ + +E + + N
Sbjct: 318 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVA 376
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
T ++DM ++ G++++A +P +S W +++SG + N A
Sbjct: 377 LGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGNAHGA 425
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 14/284 (4%)
Query: 83 NGFDLVV--HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NG L V N +++ ++ GNLE A++LFD M + VSWT ++ G+ + G ++ +
Sbjct: 237 NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKL 296
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P ++V+ W A I G+V EAL LF ++ + P+EVT S AC+++
Sbjct: 297 FDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGAL 356
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G+ + I K +V++ +LI + K G++ A VF + R+ ++WT I+
Sbjct: 357 DVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGL 416
Query: 261 IEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPN 315
G+ A F EM + +EV++ +++ G EE + F QM ++++ P
Sbjct: 417 ALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPK 476
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNAL 357
+S ++ L R+G+ A L + IE D + AL
Sbjct: 477 LKHYSCMVDLLG-----RAGLLEEAEELIKSMPIEADAVVWGAL 515
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/628 (32%), Positives = 337/628 (53%), Gaps = 66/628 (10%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F ++ C NA+++ G Q + + N + T +++ + K +++++ F+R
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAA-NVFAMTGVVNMYAKCRQIDDAYKMFDRM 208
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++++SW I GF QNGF+ +AL+L L++ + G +P+ +T ++ A A++ +G
Sbjct: 209 PERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGK 268
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
S+ G +AGF K V++ +L + K G V+ AR +FD M+++ VVSW ++D ++
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV--- 325
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
Q+G PE+A +F +M P L
Sbjct: 326 ----------------------------QNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A L L G VH V ++ + D+ + N+LI +YSKC +F+++ + H
Sbjct: 358 ACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR--TH 415
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VSWN+MI GY NG++ EA F+EM
Sbjct: 416 -VSWNAMILGYAQNGRVSEA-------------------------------LNCFSEMKS 443
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G P+ T SV+ A A ++ K +HG II+ ++F+ TAL D Y+K G I
Sbjct: 444 LGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHM 503
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R++FD + D++ I+W M+ G G + +++LF++M+K ++ PN++T LSV+ ACSH
Sbjct: 504 ARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSH 563
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLVD+GL++F SM+ Y ++P+ HY +VD+L R+GR+ EA DFI +MP P +
Sbjct: 564 SGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYG 623
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+ CK +KN ++ E+A K L++L + +VLL+NIYAS +W VRK M +KG
Sbjct: 624 AXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKG 683
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
L+K+ GCS VE+RN+VH F+ + +P+
Sbjct: 684 LKKTPGCSVVELRNEVHSFYSGSTTHPQ 711
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 230/514 (44%), Gaps = 71/514 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVIS--WTAAICGFVQNGFSFEALKLFLKLLESG 179
T L+S F K+G + E+ FE P + + + + G+ +N AL ++
Sbjct: 85 TKLVSLFSKYGSINEAARVFE--PIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD 142
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
VKP F+ + K C + D + G + G + F +V ++ + K ++D
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQID--- 199
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+A ++FD MPER+ VSW+ +IA ++Q+G+ ++
Sbjct: 200 ----------------------------DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A L +M +P++ VL A A + L G +H + ++ G K V IS AL D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+YSKCG + RL+ FD M ++ VSW
Sbjct: 292 MYSKCGSVETARLI----------------------------------FDGMDQKTVVSW 317
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
++++ GY+++ + + AVF +ML G P T L A A + LE+GK +H + +
Sbjct: 318 NSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQ 377
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
L D+ + +L Y+K ++ + +F+ + + +SW M+ G A++G E++N
Sbjct: 378 LNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNC 437
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F EM+ + P+ T++SV+ A + V + K+ + + + N T +VDM S
Sbjct: 438 FSEMKSLGMKPDSFTMVSVIPALAELS-VTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ G + A + M + W +++ G T+
Sbjct: 497 KCGAIHMARKLFD-MISDRHVITWNAMIDGYGTH 529
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 157/394 (39%), Gaps = 65/394 (16%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +H + + + + + L+ MY ++ A++I +LNG V N MI
Sbjct: 367 RGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYA 426
Query: 99 QWGNLEEAQRLFDGM----------------PERNEVS------W--------------- 121
Q G + EA F M P E+S W
Sbjct: 427 QNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIF 486
Query: 122 --TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
TAL+ + K G + + F+ ++VI+W A I G+ +G AL LF K+ +
Sbjct: 487 VTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLA 238
V+PN++T+ S+ AC+ GL F + + G E + +++ L + G +
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI--- 603
Query: 239 RSVFDRMEKRDVVSWTVILDVF---------IEMGDLGEARRIFDEMPERNEVSWSVMIA 289
+ +D +E + + IE+G+ A+++F+ P+ E + V++A
Sbjct: 604 KEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKA-AKKLFELNPD--EGGYHVLLA 660
Query: 290 R-YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
Y + + + + M + K C + L + + SG H +I
Sbjct: 661 NIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELR--NEVHSFYSGSTTHPQSKRIY-- 716
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
F+ + ++ + G D L+ D VE DV
Sbjct: 717 --AFLEELVYEIKA-AGYVPDTNLILD--VEDDV 745
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 471 KDLHGKI---IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
K+LH I IK G + T L ++K G I + RVF+ + DK + + M++G
Sbjct: 63 KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++ + ++ M + P +L C + + +G K + + N
Sbjct: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRG-KEIHGQLITNSFAAN 181
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
T VV+M ++ ++ +A + MP E D +W ++++G + A++A++ +
Sbjct: 182 VFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAG---FSQNGFAKKALELVL 237
Query: 648 KLAEE--HPAGYVLLSNIYASA 667
++ +E P L++ + A+A
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAA 259
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/803 (28%), Positives = 392/803 (48%), Gaps = 164/803 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL+ + + + +H + + + + +L L+ +Y + A+ + + +
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES-------MW 139
+ +N +++A + NL+ A RLF MPERN VS +I+ +K+G ++ M
Sbjct: 71 IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130
Query: 140 YFERNPFQ---------------------------------NVISWTAAICGFVQNGFSF 166
Y P N+ A +C + + G +
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNE 190
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF--------------- 211
+A ++F E V+PNEVTF+++ ++ N + GL +F L+
Sbjct: 191 DAFRVF----EGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTIL 246
Query: 212 --------------------------------KAGFEKHVSVCNSLITLSLKMGEVDLAR 239
K GFE+ + +CNSL+ + K G++D A
Sbjct: 247 VICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAE 306
Query: 240 SVFDRMEKRDVVSWTVI-------------LDVFIEM----------------------G 264
+VF+ ++K VVSW ++ L+ F M G
Sbjct: 307 NVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSG 366
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
D+ R+IFD M + +SW+ +++ YNQS EA LFR+M P+ + +I+LS
Sbjct: 367 DVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILS 426
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ A L L +G VHA K+G DV+++++LI++YSKCG+ + + VF + E D
Sbjct: 427 SCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELD--- 483
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VV WNSMI G+ +N ++A F M +QF
Sbjct: 484 VVCWNSMIAGFSINSLEQDALACFKRM------------------RQF------------ 513
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G P++ +F+++ + A ++SL +G+ +H +IIK G+ +VF+G++L + Y K GD+ +
Sbjct: 514 -GFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGA 572
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R FD MP KN ++W M+ G A +GY E+++L+++M + P+++T ++VL ACSH
Sbjct: 573 ARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSH 632
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
S LVD+G++ F+SM + + P HYTC++D L R GR +E E +++MP++ D+ W
Sbjct: 633 SALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWE 692
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LS C+ + N +A+RA + L +L + A YVLL+N+Y+S GRW DA VR LM++
Sbjct: 693 VVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQ 752
Query: 685 LRKSGGCSWVE----VRNQVHFF 703
+ K G S E V+N+ FF
Sbjct: 753 IHKDPGYSRSEFKYDVQNKTSFF 775
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 322/573 (56%), Gaps = 5/573 (0%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ISG++K G ++++ FE P + +S+T I GFV+N F EA+K++ ++ GV PN
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
EVT +S+ AC + + GL+ K F+ V V +L+ + + AR++FD
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M++++VVSW V+L+ + + G A+ +F+ +P+++ VSW +I Y + EA +
Sbjct: 121 EMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMM 180
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
+R M P+ ++SA A+ G +H V+K + F+ +I YS
Sbjct: 181 YRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSA 240
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG + + KD HV S N++I G+ N +++A+ELF+ MP+R+ SWS +I
Sbjct: 241 CGRINEACFQLE-FGMKD--HVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMI 297
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
SGY + Q + +F+ M+ SG PN+ T SV A A++ +L++G+ H + P
Sbjct: 298 SGYTQSDQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIP 357
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI--SWTVMVRGLAESGYAKESINLFE 541
+ L ++ D YAK G I ++ VF ++ DK W ++ GLA G+AK S+ ++
Sbjct: 358 LNDNLSASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLEIYS 417
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
++++ I + +T + VL AC H+GLV G YF SM+ YNI P+ RHY C+VD+L ++
Sbjct: 418 DLQRRHIKLSAITFIGVLSACCHAGLVGLGKSYFKSMKSKYNIDPDIRHYGCMVDLLGKA 477
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL E E+ I SMP + D W LLS CKT++N I ERA +NL KL H +LLS
Sbjct: 478 GRLEEVEELIRSMPMKADVVIWGMLLSACKTHRNITIGERAAENLAKLDPSHGPSRILLS 537
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N+YA GRW DA VR++M + + G S V
Sbjct: 538 NLYADVGRWEDAFLVRRVMQSHRMHRLPGYSGV 570
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 175/341 (51%), Gaps = 3/341 (0%)
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+GF LV N ++N +L EA+ LFD M E+N VSW +++G+ K G + F
Sbjct: 92 FDGFVLVSTN-LLNMYCASSSLGEARALFDEMQEKNVVSWNVMLNGYSKAGFANLAKEVF 150
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
E P ++++SW I G+V+ EAL ++ ++ +G+ P+EVT + AC
Sbjct: 151 EMIPDKDIVSWGTIIDGYVRVERLREALMMYRLMVSTGLGPSEVTMIDLISACGRAMAIV 210
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G + ++ K F+ + V ++I G ++ A + K V S ++ FI
Sbjct: 211 EGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACFQLEFGMKDHVASRNALIAGFI 270
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ +AR +F+EMPER+ SWS MI+ Y QS P A LF +M +PN
Sbjct: 271 RNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMALELFHRMVTSGIRPNEVTMVS 330
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
V SA+A+L L+ G H +V I + +S ++ID+Y+KCG VF I +K
Sbjct: 331 VFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLSASIIDMYAKCGSINTALEVFYQIRDK- 389
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
+ V WN++I G +G + + E++ ++ +R+ + SAI
Sbjct: 390 ASTVSPWNTIICGLATHGHAKLSLEIYSDLQRRH-IKLSAI 429
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/597 (33%), Positives = 336/597 (56%), Gaps = 11/597 (1%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI+ + + ++ + P V S+++ I + +++ +F ++ G+ P+
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++ K CAE++ F+ G + + +G + V SL + ++ G + AR VFD
Sbjct: 116 THVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFD 175
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEE 299
RM ++DVV+ + +L + G L E RI EM E N VSW+ +++ +N+SGY +E
Sbjct: 176 RMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKE 235
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A +F++M F P+ S VL ++ + L G +H +V+K G+ KD + +A++D
Sbjct: 236 AVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLD 295
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----N 415
+Y K G +FD E ++ N+ I G NG +++A E+F ++ N
Sbjct: 296 MYGKSGHVYGIIKLFD---EFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELN 352
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
VSW++II+G ++ + +F EM ++G PN+ T S+L A ++A+L G+ HG
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHG 412
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
+++ DV +G+AL D YAK G I+ S+ VF+ MP KN + W ++ G + G AKE
Sbjct: 413 FAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKE 472
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
+++FE + +T + P+ ++ S+L AC GL D+G KYFN M Y IKP HY+C+V
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMV 532
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
++L R+G+L EA D I +PFEPDS W +LL+ C+ N +AE A + L+ L E+P
Sbjct: 533 NLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPG 592
Query: 656 GYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YVL+SNIYA+ G W + ++R M GL+K+ GCSW++V+N+V+ +P+
Sbjct: 593 TYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQ 649
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 265/546 (48%), Gaps = 28/546 (5%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL--LIMYLGSRKSLEANEIVKDLNG 84
L+ +T L Q + + G+ + ++ L + L + K+ + V ++G
Sbjct: 87 LIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSG 146
Query: 85 FDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF- 141
D+ V + + ++ G + +A+++FD M E++ V+ +AL+ G+ + G +EE +
Sbjct: 147 LDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILS 206
Query: 142 --ERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
E++ + N++SW + GF ++G+ EA+ +F K+ G P++VT SS+ + +
Sbjct: 207 EMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+ +G + G + K G K V ++++ + K G V +FD E + +
Sbjct: 267 NLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYIT 326
Query: 259 VFIEMGDLGEARRIF----DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
G + +A +F ++ E N VSW+ +IA Q+G EA LFR+M KP
Sbjct: 327 GLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N +L A ++ AL G H +++ + DV + +ALID+Y+KCG K ++VF
Sbjct: 387 NRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVF 446
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHK 430
+ + K+ +V WNS++ GY ++G+ +E +F+++ K + +S+++++S +
Sbjct: 447 NMMPTKN---LVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 431 QFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
D + FN M G P +S ++ L++ DL I ++ F D +
Sbjct: 504 LTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL---IKEIPFEPDSCVW 560
Query: 490 TALTDTYAKSGDIE----SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
AL ++ +++ +++++F P+ N ++ +M A G E ++ +ME
Sbjct: 561 GALLNSCRLQNNVDLAEIAAQKLFHLEPE-NPGTYVLMSNIYAAKGMWTEVDSIRNKMES 619
Query: 546 TSITPN 551
+ N
Sbjct: 620 LGLKKN 625
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 7/203 (3%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALI + K GR++ S F P +N++ W + + G+ +G + E + +F L+ + +K
Sbjct: 427 SALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLK 486
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ ++F+S+ AC ++ G F ++ + G + + + ++ L + G++ A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 241 VFDRME-KRDVVSWTVILDV--FIEMGDLGE--ARRIFDEMPERNEVSWSVMIARYNQSG 295
+ + + D W +L+ DL E A+++F PE N ++ +M Y G
Sbjct: 547 LIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPE-NPGTYVLMSNIYAAKG 605
Query: 296 YPEEAFRLFRQMTRYSFKPNTSC 318
E + +M K N C
Sbjct: 606 MWTEVDSIRNKMESLGLKKNPGC 628
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 71/178 (39%), Gaps = 5/178 (2%)
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K H +I+K G D ++ L +Y+ + + +PD S++ ++ L
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
++ +SI +F M + P+ + ++ C+ G K + + + + +
Sbjct: 93 KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAG-KQIHCVACVSGLDMDA 151
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+ M R GR+ +A + M E D ++LL G Y + E V+ L
Sbjct: 152 FVQGSLFHMYMRCGRMGDARKVFDRMS-EKDVVTCSALLCG---YARKGCLEEVVRIL 205
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 218/705 (30%), Positives = 355/705 (50%), Gaps = 104/705 (14%)
Query: 47 LIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEA 106
+IK G + E T+L+ ++ EA + + + V+++ M+ + L +A
Sbjct: 67 IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDA 126
Query: 107 QRLFDGMP---------------------------------------ERNEVSWTALISG 127
R ++ M + N + TA+++
Sbjct: 127 VRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNL 186
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ K ++E++ FER P ++++SW + G+ QNGF+ A+++ L++ E+G KP+ +T
Sbjct: 187 YAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITL 246
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
S+ A A++ R+G S+ G F+AGFE V+V +++ K G V AR VF M
Sbjct: 247 VSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSS 306
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
R+VVSW ++D Y Q+G EEAF F +M
Sbjct: 307 RNVVSWNTMID-------------------------------GYAQNGESEEAFATFLKM 335
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
+P L A A+L L G +VH + + I DV + N+LI +YSKC
Sbjct: 336 LDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRV 395
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
VF ++ K VV+WN+MI GY NG + EA LF M + +D+
Sbjct: 396 DIAASVFGNLKHKT---VVTWNAMILGYAQNGCVNEALNLFCEM-QSHDIK--------- 442
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
P+ T SV+ A A ++ + K +HG I+ +VF
Sbjct: 443 ---------------------PDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVF 481
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ TAL DT+AK G I+++R++FD M +++ I+W M+ G +G+ +E+++LF EM+ S
Sbjct: 482 VCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGS 541
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ PNE+T LSV+ ACSHSGLV++G+ YF SM+ Y ++P HY +VD+L R+GRL +A
Sbjct: 542 VKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDA 601
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
FI MP +P ++L C+ +KN ++ E+ L+ L + +VLL+N+YASA
Sbjct: 602 WKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASA 661
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
W VR M +KG++K+ GCS VE+RN+VH F+ + ++P+
Sbjct: 662 SMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQ 706
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 204/444 (45%), Gaps = 82/444 (18%)
Query: 28 LKDITSQNLVIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L ++ +NL ++ GR +HG +I G + T ++ +Y R+ +A ++ + + D
Sbjct: 148 LLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRD 207
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS-------------------------- 120
LV N ++ Q G A ++ M E +
Sbjct: 208 LVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHG 267
Query: 121 -------------WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
TA++ + K G V + F+ +NV+SW I G+ QNG S E
Sbjct: 268 YAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEE 327
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI--FKAGFEKHVSVCNSL 225
A FLK+L+ GV+P V+ ACA + D G V L+ K GF+ VSV NSL
Sbjct: 328 AFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD--VSVMNSL 385
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I++ K VD+A SVF ++ + VV+ W+
Sbjct: 386 ISMYSKCKRVDIAASVFGNLKHKTVVT-------------------------------WN 414
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
MI Y Q+G EA LF +M + KP++ V++ALA L R +H ++
Sbjct: 415 AMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRT 474
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
++K+VF+ ALID ++KCG + R +FD + E+ HV++WN+MI GYG NG EA
Sbjct: 475 LMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQER---HVITWNAMIDGYGTNGHGREAL 531
Query: 406 ELFDNMP----KRNDVSWSAIISG 425
+LF+ M K N++++ ++I+
Sbjct: 532 DLFNEMQNGSVKPNEITFLSVIAA 555
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 125/324 (38%), Gaps = 82/324 (25%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + ++ + ++ Q + +HG I+T + K ++ T L
Sbjct: 447 TLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTAL-------------------- 486
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
I+ + + G ++ A++LFD M ER+ ++W A+I G+
Sbjct: 487 -----------IDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGT------------ 523
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
NG EAL LF ++ VKPNE+TF S+ AC+
Sbjct: 524 -------------------NGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEE 564
Query: 203 GLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLA-RSVFDRMEKRDVVSWTVILDVF 260
G+ F + G E + +++ L + G +D A + + D K + +L
Sbjct: 565 GMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGAC 624
Query: 261 -----IEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYSFKP 314
+E+G+ A +FD P+ + + V++A Y + ++ R+ M + +
Sbjct: 625 RIHKNVELGE-KTADELFDLDPD--DGGYHVLLANMYASASMWDKVARVRTAMEKKGIQK 681
Query: 315 NTSCFSIVLSALASLKALRSGMHV 338
C SL LR+ +H
Sbjct: 682 TPGC---------SLVELRNEVHT 696
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 327/589 (55%), Gaps = 66/589 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + + R++ + FE ++ +++ I G+ ++G EA+ LFLK+ +SG KP+
Sbjct: 184 LLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPS 243
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ TFS + KA ++DF LG + GL GF + SV N
Sbjct: 244 DFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQ------------------- 284
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
IL + + + E R +F+EMPE + VS++V+I+ Y+Q+ EE+ L
Sbjct: 285 ------------ILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNL 332
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR+M F F+ +LS A+L +L+ G VH + + + + N+L+D+Y+K
Sbjct: 333 FREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAK 392
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C +FD EA+ +F ++ +R+ VSW+A+I
Sbjct: 393 CE-------MFD---------------------------EAELIFKSLSQRSTVSWTALI 418
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
SGY++ +F +M + ++STF++VL ASA ASL GK LH II+ G
Sbjct: 419 SGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNL 478
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+VF G+ L D YAK G I+ + +VF+ MPD+N +SW ++ A++G + +I F +M
Sbjct: 479 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKM 538
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
++ + P+ ++IL VL ACSH G V++G ++F +M PIY I P +HY C++D+L R+GR
Sbjct: 539 IQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGR 598
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EHPAGYVLLSN 662
+EAE ++ MPFEPD W+S+L+ C+ YKN+ +AERA + L+ + + A YV +SN
Sbjct: 599 FAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSN 658
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
IYA+AG+W + +V+K M E+G++K SWVEV +++H F +P
Sbjct: 659 IYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 707
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 197/423 (46%), Gaps = 40/423 (9%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
I K GF N + L+ G+V A V+D M ++ VS ++ +++MGDL A
Sbjct: 35 IIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSA 94
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R +FD MP+R V+W++++ Y + + +EAF+LFRQM R P+ F+ +L
Sbjct: 95 RHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDA 154
Query: 330 KALRSGMHVHAHVLKIGIEKDVFIS--NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+ VHA +K+G + ++F++ N L+ Y + ++F+ I++KD V+
Sbjct: 155 VPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKD---SVT 211
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+N++I GY +G EA LF M + SG
Sbjct: 212 FNTLITGYEKDGLYTEAIHLFLKMRQ-------------------------------SGH 240
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ TFS VL A + G+ LHG + GF D +G + Y+K + +R
Sbjct: 241 KPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRN 300
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+F+ MP+ + +S+ V++ +++ +ES+NLF EM+ ++L ++
Sbjct: 301 LFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSS 360
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHY-TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+ G + + I + H +VDM ++ EAE S+ + + +W +L
Sbjct: 361 LQVGRQV--HCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLS-QRSTVSWTAL 417
Query: 627 LSG 629
+SG
Sbjct: 418 ISG 420
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 147/345 (42%), Gaps = 44/345 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + + G+ LHG + TG ++ + ++L Y + LE + ++ D
Sbjct: 250 VLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELD 309
Query: 87 LVVHNCMINANIQWGNLEEAQRLFD-----GMPERN--------------------EVSW 121
V +N +I++ Q EE+ LF G RN +V
Sbjct: 310 FVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHC 369
Query: 122 TALISG--------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
A+++ + K +E+ F+ ++ +SWTA I G+VQ G
Sbjct: 370 QAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGA 429
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
LKLF K+ + ++ ++ TF+++ KA A LG + I ++G ++V + L+
Sbjct: 430 GLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 489
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD----LGEARRIFDEMPERNEVS 283
+ K G + A VF+ M R+ VSW ++ + + GD +G ++ + + VS
Sbjct: 490 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVS 549
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
++ + G+ E+ F+ M+ Y P ++ +L L
Sbjct: 550 ILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLG 594
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 46/259 (17%)
Query: 33 SQNLVIQGRALHGHLIKTGIHKERY-LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHN 91
SQ + AL ++ G+H L T++ L + +S A ++K GF ++
Sbjct: 407 SQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFAT-VLKASAGFASLLLG 465
Query: 92 CMINA-NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
++A I+ GNLE N S + L+ + K G +++++ FE P +N +
Sbjct: 466 KQLHAFIIRSGNLE------------NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 513
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A I + NG A+ F K+++SG++P+ V+ + AC+ G F +
Sbjct: 514 SWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAM 573
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
++ K+ + +LD+ G EA
Sbjct: 574 ----------------------------SPIYGITPKKK--HYACMLDLLGRNGRFAEAE 603
Query: 271 RIFDEMP-ERNEVSWSVMI 288
++ DEMP E +E+ WS ++
Sbjct: 604 KLMDEMPFEPDEIMWSSVL 622
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ + +IIK GF D + + G + ++ +V+D MP KN +S M+ G +
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 531 GYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
G + +LF+ M ++T +T TIL +A ++ D+ K F M
Sbjct: 89 GDLSSARHLFDAMPDRTVVT---WTILMGWYAGNNH--FDEAFKLFRQM 132
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 326/590 (55%), Gaps = 66/590 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + K R++ + F+ P + +S+ A I G+ ++G +A+ LF+++ SG+KP
Sbjct: 190 LVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPT 249
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E TF+++ A ++D LG + + K F +V V N+L
Sbjct: 250 EFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNAL------------------ 291
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
LD + + + +AR++FDEMPE++ VS++V+I+ Y G + AF L
Sbjct: 292 -------------LDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 338
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR++ +F F+ +LS ++ G +HA + + ++ + N+L+D+Y+K
Sbjct: 339 FRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 398
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C G+ EEA+ +F N+ R+ V W+A+I
Sbjct: 399 C----------------------------------GKFEEAEMIFTNLTHRSAVPWTAMI 424
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
S Y++ ++ +FN+M + I +++TF+S+L ASAS+ASL GK LH IIK GF
Sbjct: 425 SAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM 484
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+VF G+AL D YAK G I+ + + F MPD+N +SW M+ A++G A+ ++ F+EM
Sbjct: 485 SNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEM 544
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + P+ ++ L VL ACSHSGLV++GL +FNSM IY + P HY VVDML RSGR
Sbjct: 545 VLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGR 604
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EHPAGYVLLSN 662
+EAE + MP +PD W+S+L+ C+ +KN+++A RA L+ + E A YV +SN
Sbjct: 605 FNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSN 664
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
IYA+AG+W + V K M ++G++K SWVE++++ H F +P+
Sbjct: 665 IYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQ 714
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 70/289 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H I T E + L+ MY K EA I +L V MI+A +Q
Sbjct: 370 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 429
Query: 100 WGNLEEAQRLFDGMPE---------------------------------------RNEVS 120
G EE +LF+ M + N S
Sbjct: 430 KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 489
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+AL+ + K G +++++ F+ P +N++SW A I + QNG + LK F +++ SG+
Sbjct: 490 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 549
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P+ V+F + AC+ GL F NS+ ++ ++D R
Sbjct: 550 QPDSVSFLGVLSACSHSGLVEEGLWHF---------------NSMT----QIYKLDPRRE 590
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMI 288
+ ++D+ G EA ++ EMP + +E+ WS ++
Sbjct: 591 -----------HYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 628
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 95/227 (41%), Gaps = 40/227 (17%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
N STF + L ++ +I+K GF D + K+G++ +R++F
Sbjct: 16 NVSTFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLF 75
Query: 510 DRMPDKNEIS-------------------------------WTVMVRGLAESGYAKESIN 538
++MP KN +S WT+++ G ++ KE+
Sbjct: 76 EKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFE 135
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT--CVVD 596
LF +M++ P+ +T +++L C+ + G + I + + R +VD
Sbjct: 136 LFVQMQRCGTEPDYVTFVTLLSGCNGHEM---GNQITQVQTQIIKLGYDSRLIVGNTLVD 192
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+S RL A MP E DS ++ ++++G Y + + E+AV
Sbjct: 193 SYCKSNRLDLACQLFKEMP-EIDSVSYNAMITG---YSKDGLDEKAV 235
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 63/306 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ LH +IK+G + + LL +Y +A + +++ ++V N MI+A Q
Sbjct: 471 GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ 530
Query: 100 WGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS---- 151
G E + F M + + VS+ ++S G VEE +W+F N +
Sbjct: 531 NGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF--NSMTQIYKLDPR 588
Query: 152 ---WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+ + + ++G EA KL + E + P+E+ +SS+ AC + L
Sbjct: 589 REHYASVVDMLCRSGRFNEAEKL---MAEMPIDPDEIMWSSVLNACRIHKNQELARRA-- 643
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
A +F+ E RD + + +++ G
Sbjct: 644 -----------------------------ADQLFNMEELRDAAPYVNMSNIYAAAGQWEN 674
Query: 269 ARRIFDEMPERN----------EVSWSVMIARYNQSGYPE-EAFR-----LFRQMTRYSF 312
++ M +R E+ + N +P+ E R L + M +
Sbjct: 675 VSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGY 734
Query: 313 KPNTSC 318
KP+TSC
Sbjct: 735 KPDTSC 740
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/576 (34%), Positives = 318/576 (55%), Gaps = 51/576 (8%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
GRV ++ F+R P ++V+SWTA + + + G +A LF + + N VT++++
Sbjct: 49 GRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDR---PDARRNVVTWTALL 105
Query: 192 KACAEINDFRLG-LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
A R G + +F+ E++V N+++ G V A ++FD M RD
Sbjct: 106 SGYA-----RAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDA 160
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
SW ++L + G++ +AR++FD MPERN ++W+ M+A +SG +EA LF M
Sbjct: 161 GSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMP-- 218
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
E++V NA+I Y++ +
Sbjct: 219 -------------------------------------ERNVVSWNAMISGYARNHRIDEA 241
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+F + +D+A SWN MI G+ + +E A++LFD MP+RN ++W+ +++GYL+
Sbjct: 242 HDLFMKMPTRDIA---SWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSM 298
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
Q + +FN ML+ G PN+ TF + A +++A L +G+ +H I K F +D F+ +
Sbjct: 299 QSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIES 358
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
L + YAK G+I +R+VFD +K+ ISW M+ A G E+I+L+E+M++ P
Sbjct: 359 TLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKP 418
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
N++T + +L ACSHSGLVD+GL+ F M +I HYTC++D+ SR+GRL +A+
Sbjct: 419 NDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRL 478
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
I+ + EP S W +LL GC ++ NE I + A +NL + + Y LL NIYASAG+W
Sbjct: 479 IHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKW 538
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
+A +R M ++GL+K GCSW+EV N+VH F +
Sbjct: 539 KEAAKIRSEMNDRGLKKQPGCSWIEVENKVHVFVSR 574
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 146/545 (26%), Positives = 244/545 (44%), Gaps = 58/545 (10%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R LF P+ S+ L+ Q ++ RAL + + T LL
Sbjct: 55 RRLFDRTPDRDVVSWT----ALVAAYARQGMLHDARAL---FDRPDARRNVVTWTALLSG 107
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + + EA + + + ++V N M+ A G + +A LFDGMP R+ SW L+
Sbjct: 108 YARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILL 167
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
+ ++ G ++++ F+R P +NV++WT + G ++G EA LF + P
Sbjct: 168 AALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGM------P--- 218
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
E++V N++I+ + +D A +F +M
Sbjct: 219 ------------------------------ERNVVSWNAMISGYARNHRIDEAHDLFMKM 248
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
RD+ SW +++ FI+ DL A+ +FD+MP RN ++W+ M+ Y QS E A ++F
Sbjct: 249 PTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFN 308
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M +PN F + A ++L L G VH + K + D FI + L++LY+KCG
Sbjct: 309 GMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCG 368
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSA 421
E + R VFD EKD V+SWN MI Y +G EA L++ M K NDV++
Sbjct: 369 EIRLARKVFDLSKEKD---VISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVG 425
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV---LCASASVASLEKGKDLHGKII 478
++S D +F M+ I + + LC+ A K K+
Sbjct: 426 LLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVE 485
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
++ LG + GD+ ++R + + P+ N ++T++ A +G KE+
Sbjct: 486 PSSTVWNALLGGCNSHGNESIGDL-AARNLLEAEPN-NAGTYTLLCNIYASAGKWKEAAK 543
Query: 539 LFEEM 543
+ EM
Sbjct: 544 IRSEM 548
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 324/591 (54%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TA + +MK + ++ F P N+ S+ A I G+ ++ EAL +F L +SG+
Sbjct: 314 TATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLG 373
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+EV+ S +ACA I GL V GL K+ + ++ V N+
Sbjct: 374 LDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANA----------------- 416
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
ILD++ + G L EA +F+EM R+ VSW+ +IA + Q+G E+
Sbjct: 417 --------------ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 462
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF M + +P+ + VL A A +AL GM +H ++K + D F+ ALID+Y
Sbjct: 463 SLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMY 522
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKCG ME+A++L D + ++ VSW+A
Sbjct: 523 SKCG----------------------------------MMEKAEKLHDRLAEQTVVSWNA 548
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IISG+ KQ + F++ML G P+ T++++L A++ ++E GK +H +IIK
Sbjct: 549 IISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE 608
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D ++ + L D Y+K G+++ + +F++ P+++ ++W MV G A+ G +E++ +FE
Sbjct: 609 LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFE 668
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M+ ++ PN T L+VL AC H GLV+KGL YF+SM Y + P HY+CVVD++ RS
Sbjct: 669 YMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRS 728
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G++S+A + I MPFE D+ W +LLS CK + N ++AE+A ++ +L E A YVLLS
Sbjct: 729 GQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLS 788
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYA+AG W + +RK+M GL+K GCSW+E++++VH F +P+
Sbjct: 789 NIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPR 839
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 260/562 (46%), Gaps = 67/562 (11%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC+I I+ +LE A ++FDGMP+R+ VSW A++ G+ G + + F+ P ++
Sbjct: 79 VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW + I G++ NG + + +FL++ G + TF+ + K+C+ + D G+ + G
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 198
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L K GF+ C DVV+ + +LD++ + L
Sbjct: 199 LAVKMGFD-----C--------------------------DVVTGSALLDMYAKCKKLDC 227
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
+ + F MPE+N VSWS +IA Q+ LF++M + + S F+ V + A
Sbjct: 228 SIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAG 287
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L ALR G +H H LK DV I A +D+Y KC D + +F+S
Sbjct: 288 LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS------------ 335
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+P N S++AII GY + +F + SG
Sbjct: 336 ----------------------LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLG 373
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
++ + S A A + +G +HG +K ++ + A+ D Y K G + + V
Sbjct: 374 LDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 433
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+ M ++ +SW ++ ++G +++++LF M ++ + P+E T SVL AC+ +
Sbjct: 434 FEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQAL 493
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ G++ N + + + ++DM S+ G + +AE + + E +W +++S
Sbjct: 494 NCGMEIHNRIIK-SRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIIS 551
Query: 629 GCKTYKNEQIAERAVKNLWKLA 650
G K + A++ + ++
Sbjct: 552 GFSLQKQSEEAQKTFSKMLEMG 573
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 224/457 (49%), Gaps = 46/457 (10%)
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
TFS I + C++ G + F+ V V N LI + +K +++ A VFD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
+RD VSW +L + GD+G A+++FD MPER+ VSW+ +I+ Y +G + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
QM R + + F++VL + +SL+ G+ +H +K+G + DV +AL+D+Y+KC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ F S+ EK+ VSW+++I G N + ELF M K
Sbjct: 224 KLDCSIQFFHSMPEKN---WVSWSAIIAGCVQNDDLRGGLELFKEMQK------------ 268
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
+G ++STF+SV + A +++L G LHG +K F D
Sbjct: 269 -------------------AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTD 309
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
V +GTA D Y K ++ ++++F+ +P+ N S+ ++ G A S E++ +F ++K
Sbjct: 310 VVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQK 369
Query: 546 TSITPNELTILSVLFACS-----HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ + +E+++ AC+ GL GL SM+ + + N ++DM +
Sbjct: 370 SGLGLDEVSLSGAFRACAVIKGDLEGLQVHGL----SMKSL--CQSNICVANAILDMYGK 423
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
G L EA M D+ +W ++++ + NE+
Sbjct: 424 CGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEE 459
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 221/528 (41%), Gaps = 110/528 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHGH +KT + + T L MY+ +A ++ L +L +N +I +
Sbjct: 294 GSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYAR 353
Query: 100 WGNLEEAQRLFDGMPER----NEVSWT--------------------------------- 122
EA +F + + +EVS +
Sbjct: 354 SDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICV 413
Query: 123 --ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
A++ + K G + E+ FE ++ +SW A I QNG + L LF+ +L+SG+
Sbjct: 414 ANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGM 473
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKA--GFEKHVSVCNSLITLSLKMGEVDLA 238
+P+E T+ S+ KACA G+ + I K+ G + V + +LI + K G ++ A
Sbjct: 474 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKA 531
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+ DR+ ++ VVSW I I+ ++ E
Sbjct: 532 EKLHDRLAEQTVVSWNAI-------------------------------ISGFSLQKQSE 560
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EA + F +M P+ ++ +L A+L + G +HA ++K ++ D +IS+ L+
Sbjct: 561 EAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLV 620
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+YSKCG +D +L+F+ +D V+WN+M+ GY +G EEA ++F+ M N
Sbjct: 621 DMYSKCGNMQDFQLIFEKAPNRD---FVTWNAMVCGYAQHGLGEEALKIFEYMQLEN--- 674
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD-LHGKI 477
PN +TF +VL A + +EKG H +
Sbjct: 675 ----------------------------VKPNHATFLAVLRACGHMGLVEKGLHYFHSML 706
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
G + + + D +SG + + + + MP + + + W ++
Sbjct: 707 SNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 754
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 125/315 (39%), Gaps = 77/315 (24%)
Query: 11 INPET-SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
++P+ ++ + ++TC L+ V G+ +H +IK + + Y+++ L+ MY
Sbjct: 574 VDPDNFTYATILDTCANLVT-------VELGKQIHAQIIKKELQSDAYISSTLVDMY--- 623
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+ GN+++ Q +F+ P R+ V+W A++ G+
Sbjct: 624 ----------------------------SKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYA 655
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+HG EE++ FE +N VKPN TF +
Sbjct: 656 QHGLGEEALKIFEYMQLEN-------------------------------VKPNHATFLA 684
Query: 190 ICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-K 247
+ +AC + GL F ++ G + + + ++ + + G+V A + + M +
Sbjct: 685 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE 744
Query: 248 RDVVSWTVILDVFIEMGDLGEARR----IFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
D V W +L + G++ A + I PE + ++ ++ Y +G E +L
Sbjct: 745 ADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPE-DSAAYVLLSNIYANAGMWNEVTKL 803
Query: 304 FRQMTRYSFKPNTSC 318
+ M K C
Sbjct: 804 RKMMRFNGLKKEPGC 818
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 56/289 (19%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K TFS + + +L GK H ++I F VF+ L Y K D+E + +VFD
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
MP ++ +SW M+ G A G + LF+ M + + I L H ++D
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 571 GLKYFNSMEPIYN--------------------IKPNG----RHYTC-------VVDMLS 599
L+ M +++ I+ +G + C ++DM +
Sbjct: 162 FLQ-MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
+ +L + F +SMP E + +W+++++GC +N+ + R L+K E AG +
Sbjct: 221 KCKKLDCSIQFFHSMP-EKNWVSWSAIIAGC--VQNDDL--RGGLELFK--EMQKAGVGV 273
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
+ +AS R G S + + +Q+H KTD
Sbjct: 274 SQSTFASV-----------------FRSCAGLSALRLGSQLHGHALKTD 305
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 212/631 (33%), Positives = 339/631 (53%), Gaps = 43/631 (6%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM-WYFERNPFQ 147
V N ++ A + G L A+RLFD MP+ N + AL+S + H R+ M F P +
Sbjct: 47 VLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSA-LAHARLLPDMDRLFASMPQR 105
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLE-------SGVKPNEVTFSSICKACAEINDF 200
+ +S+ A I GF G A + LL + V+P+ +T S + A + + D
Sbjct: 106 DAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDR 165
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG V I + GF + + L+ + KMG + A+ VFD M ++VV + ++
Sbjct: 166 ALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGL 225
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+ + EAR +F+ M +R+ ++W+ M+ Q+G EA +FR+M + F
Sbjct: 226 LRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFG 285
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+L+A +L A G +HA+ ++ + ++F+ +AL+D+YSKC + RL
Sbjct: 286 SILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKC---RSIRL-------- 334
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
A+ +F M +N +SW+A+I GY ++ + VF+
Sbjct: 335 -----------------------AEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFS 371
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM G PN T SV+ + A++ASLE+G H + G + + +AL Y K G
Sbjct: 372 EMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCG 431
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
IE + R+FD MP +++S+T +V G A+ G AKE+I+LFE+M + PN +T + VL
Sbjct: 432 SIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLS 491
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACS SGLV+KG YF+SM+ + I HYTC++D+ SRSGRL EAE+FI MP PD+
Sbjct: 492 ACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDA 551
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
WA+LLS C+ + +I + A +NL K ++PA YVLL +++AS G W + +R+ M
Sbjct: 552 IGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGM 611
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++ ++K GCSW++ +N+VH F +P
Sbjct: 612 RDRQVKKEPGCSWIKYKNRVHIFSADDQSHP 642
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 208/493 (42%), Gaps = 110/493 (22%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H +++ G + + L+ MY +A + ++ ++V++N MI ++
Sbjct: 168 GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLR 227
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+EEA+ +F+ M +R+ ++WT +++G
Sbjct: 228 CKMVEEARGVFEAMVDRDSITWTTMVTG-------------------------------L 256
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QNG EAL +F ++ GV ++ TF SI AC + G + + ++ ++
Sbjct: 257 TQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNI 316
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V ++L+ + K + LA +VF RM ++++SWT +
Sbjct: 317 FVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAM----------------------- 353
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
I Y Q+G EEA R+F +M KPN V+S+ A+L +L G H
Sbjct: 354 --------IVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFH 405
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
L G+ + +S+AL+ LY KCG +D +FD + D VS+ +++ GY
Sbjct: 406 CMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHD---QVSYTALVSGY---A 459
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
Q +AKE D +F +MLL G PN TF VL
Sbjct: 460 QFGKAKETID----------------------------LFEKMLLKGVKPNGVTFIGVLS 491
Query: 460 ASASVASLEKG-------KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
A + +EKG + HG I+ L Y T + D Y++SG ++ + +M
Sbjct: 492 ACSRSGLVEKGCSYFHSMQQDHG-IVLLDDHY-----TCMIDLYSRSGRLKEAEEFIRQM 545
Query: 513 PD-KNEISWTVMV 524
P + I W ++
Sbjct: 546 PRCPDAIGWATLL 558
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 71/341 (20%)
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
++ L ++ V + +++ + ++ A+ +F M +N +SWTA+I
Sbjct: 308 IRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMI------------- 354
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
G+ QNG EA+++F ++ G+KPN+ T S+ +CA +
Sbjct: 355 ------------------VGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLA 396
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + +G +++V ++L+TL K G ++ A +FD M D VS+T
Sbjct: 397 SLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYT---- 452
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+++ Y Q G +E LF +M KPN
Sbjct: 453 ---------------------------ALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVT 485
Query: 319 FSIVLSALASLKALRSGM-HVHAHVLKIGIEKDVFISN---ALIDLYSKCGETKDGRLVF 374
F VLSA + + G + H+ GI V + + +IDLYS+ G K+
Sbjct: 486 FIGVLSACSRSGLVEKGCSYFHSMQQDHGI---VLLDDHYTCMIDLYSRSGRLKEAEEFI 542
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+ + W +++ L G ME K +N+ K +
Sbjct: 543 RQMPR--CPDAIGWATLLSACRLRGDMEIGKWAAENLLKTD 581
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/567 (35%), Positives = 309/567 (54%), Gaps = 36/567 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N++ W G + AL L++ ++ G+ PN TF + KACA+ FR G +
Sbjct: 67 NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIH 126
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + K G + + V SLI + +K G + AR VFD+ RDVVS+T ++ + G +
Sbjct: 127 GHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIX 186
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
A+++FDE+P ++ VSW+ +I+ Y ++G +EA LF++M + + KP+ S VLSA A
Sbjct: 187 SAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACA 246
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
++ G VH+ + G ++ I NALIDLY KCGE
Sbjct: 247 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE--------------------- 285
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+E A LF+ + ++ +SW+ +I GY + +F EML SGE
Sbjct: 286 -------------VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 332
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESS 505
PN+ T S+L A A + +++ G+ +H I K G L T+L D YAK GDIE++
Sbjct: 333 SPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAA 392
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
++VFD M +++ SW M+ G A G A + ++F M K I P+++T + +L ACSHS
Sbjct: 393 QQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHS 452
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G++D G F SM Y I P HY C++D+L SG EAE+ INSM +PD W S
Sbjct: 453 GMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCS 512
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL CK + N ++ E +NL K+ ++ YVLLSNIYA+AGRW + R L+ +KG+
Sbjct: 513 LLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGM 572
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K GCS +E+ + VH F +P+
Sbjct: 573 KKVPGCSSIEIDSVVHEFIIGDKLHPR 599
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 201/365 (55%), Gaps = 5/365 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A +FD + E N + W+ M + S P A L+ M PN+ F +L A
Sbjct: 53 LTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKA 112
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A KA R G +H HVLK+G + D+++ +LI +Y K G +D R VFD +D V
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRD---V 169
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ ++I GY NG + A+++FD +P ++ VSW+A+ISGY E + +F EM+ +
Sbjct: 170 VSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKT 229
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P++ST +VL A A AS+E G+ +H I GF ++ + AL D Y K G++E++
Sbjct: 230 NVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+F+ + K+ ISW ++ G KE++ LF+EM ++ +PNE+T+LS+L AC+H
Sbjct: 290 SGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHL 349
Query: 566 GLVDKGLKYFNSMEP-IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
G +D G ++ + + T ++DM ++ G + A+ +SM ++W
Sbjct: 350 GAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWN 408
Query: 625 SLLSG 629
+++ G
Sbjct: 409 AMIFG 413
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 205/431 (47%), Gaps = 73/431 (16%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T LLK +G+ +HGH++K G + Y+ T L+ MY
Sbjct: 102 NSY--TFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMY----------- 148
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
++ G E+A+++FD R+ VS+TALI G+ +G + +
Sbjct: 149 --------------------VKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSA 188
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F+ P ++V+SW A I G+ + G EAL+LF +++++ VKP+E T ++ ACA+
Sbjct: 189 QKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQS 248
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
LG V I GF ++ + N+LI L +K GEV+ A +F+ + +DV+SW ++
Sbjct: 249 ASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLI 308
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ M +EA LF++M R PN
Sbjct: 309 GGYTHM-------------------------------NLYKEALLLFQEMLRSGESPNEV 337
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+L A A L A+ G +H ++ K G+ + +LID+Y+KCG+ + + VFD
Sbjct: 338 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFD 397
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQ 431
S++ + ++ SWN+MI G+ ++G+ A ++F M K +D+++ ++S
Sbjct: 398 SMLNRSLS---SWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGM 454
Query: 432 FDLVFAVFNEM 442
DL +F M
Sbjct: 455 LDLGRHIFRSM 465
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 317/591 (53%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TA + + K R+ ++ F P S A I G+ + EAL++F L +S +
Sbjct: 310 TATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLD 369
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+E++ S AC+ I + G+ + GL K G + ++ V N+
Sbjct: 370 FDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT----------------- 412
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
ILD++ + G L EA IFD+M ++ VSW+ +IA + Q+ + EE
Sbjct: 413 --------------ILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETL 458
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF M R + +P+ F V+ A A KAL GM VH V+K G+ D F+ +A+ID+Y
Sbjct: 459 ALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMY 518
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG + EA+++ + + +R VSW++
Sbjct: 519 CKCG----------------------------------MLVEAEKIHERLEERTTVSWNS 544
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IISG+ KQ + + F+ ML G IP+ T+++VL A++A++E GK +HG+I+KL
Sbjct: 545 IISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQ 604
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV++ + + D Y+K G+++ SR +F++ P ++ ++W+ M+ A G +++I LFE
Sbjct: 605 LHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFE 664
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM+ ++ PN +SVL AC+H G VDKGL YF M Y + P HY+C+VD+L RS
Sbjct: 665 EMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRS 724
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G+++EA + I SMPFE D W +LL C+ N ++AE+A +L +L + + YVLLS
Sbjct: 725 GQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLS 784
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+YA AG W + +R M L+K GCSW++VR++VH F +P+
Sbjct: 785 NVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPR 835
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 155/626 (24%), Positives = 280/626 (44%), Gaps = 109/626 (17%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ + NL A +FD MP+R+ +SW +I G+ G +E + + F+ P ++
Sbjct: 75 VSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERD 134
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW + + ++QNGF +++++F K+ ++ + TF+ + KAC I D+ LGL V
Sbjct: 135 VVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHC 194
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L + GF+ DVV+ T ++D++ L
Sbjct: 195 LAIQMGFDS-------------------------------DVVTGTALVDMYSTCKKLDH 223
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A IF EMPERN V WS +IA Y ++ E +L++ M + + F+ + A
Sbjct: 224 AFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAG 283
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L A G +HA+ LK D + A +D+Y+KC D R VF++ S
Sbjct: 284 LSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ---SH 340
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWS------AIISGYLEHKQ------- 431
N++I GY Q+ EA E+F ++ K +++S S + I GYLE Q
Sbjct: 341 NALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVK 400
Query: 432 ----FDLVFA------------------VFNEMLLSGEI--------------------- 448
F++ A +F++M + +
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLAL 460
Query: 449 ----------PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
P+ TF SV+ A A +L G ++HG++IK G D F+G+A+ D Y K
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCK 520
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G + + ++ +R+ ++ +SW ++ G + + +++ F M + + P+ T +V
Sbjct: 521 CGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATV 580
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L C++ V+ G + + + + + + +VDM S+ G + ++ P +
Sbjct: 581 LDICANLATVELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KR 638
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
D W++++ Y + E A+K
Sbjct: 639 DYVTWSAMICA---YAYHGLGEDAIK 661
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 242/511 (47%), Gaps = 41/511 (8%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++TFS I + C+ + G I GF V V N L+ K ++ A +VFD
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+M +RDV+SW ++ + +G++ A+ +FD MPER+ VSW+ M++ Y Q+G+ ++ +
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M + + + F++VL A ++ G+ VH +++G + DV AL+D+YS
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C + +F + E++ V W+++I GY N + E +L
Sbjct: 218 CKKLDHAFNIFCEMPERN---SVCWSAVIAGYVRNDRFTEGLKL---------------- 258
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+ ML G +++TF+S + A +++ E G LH +K F
Sbjct: 259 ---------------YKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFG 303
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
YD +GTA D YAK + +R+VF+ P+ S ++ G A E++ +F +
Sbjct: 304 YDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSL 363
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+K+ + +E+++ L ACS +G++ + + + N ++DM ++ G
Sbjct: 364 QKSYLDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCGLDFNICVANTILDMYAKCGA 422
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL-AEEHPAGYVLLSN 662
L EA + M + D+ +W ++++ + +NE + E + L + P Y S
Sbjct: 423 LMEACLIFDDMEIK-DAVSWNAIIAAHE--QNEHVEETLALFVSMLRSTMEPDDYTFGSV 479
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
+ A AG+ A+N + + ++ G W
Sbjct: 480 VKACAGK--KALNYGMEVHGRVIKSGMGLDW 508
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/526 (22%), Positives = 215/526 (40%), Gaps = 106/526 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LH + +KT + + T L MY + ++A ++ HN +I +
Sbjct: 290 GTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYAR 349
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALISG---------------------------- 127
+ EA +F + + +E+S + ++
Sbjct: 350 QDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICV 409
Query: 128 -------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+ K G + E+ F+ ++ +SW A I QN E L LF+ +L S +
Sbjct: 410 ANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P++ TF S+ KACA G+ V G + K+G V +++I + K G + A
Sbjct: 470 EPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEK 529
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ +R+E+R VSW I I+ ++ E A
Sbjct: 530 IHERLEERTTVSWNSI-------------------------------ISGFSSEKQGENA 558
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F +M + P+ ++ VL A+L + G +H +LK+ + DV+I++ ++D+
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDM 618
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG +D R++F+ ++D V+W++MI Y +G E+A +LF+
Sbjct: 619 YSKCGNMQDSRIMFEKAPKRD---YVTWSAMICAYAYHGLGEDAIKLFE----------- 664
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IK 479
EM L PN + F SVL A A + ++KG ++
Sbjct: 665 --------------------EMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSH 704
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
G + + + D +SG + + + + MP + +++ W ++
Sbjct: 705 YGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLL 750
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 179/426 (42%), Gaps = 73/426 (17%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
++G LHG +K G+ + +L MY +EA I D+ D V N +I A+
Sbjct: 389 LEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH 448
Query: 98 IQWGNLEEAQRLFDGM----PERNEVSWTALIS----------GFMKHGRVEESM----W 139
Q ++EE LF M E ++ ++ +++ G HGRV +S W
Sbjct: 449 EQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDW 508
Query: 140 YF---------------------ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
+ ER + +SW + I GF AL F ++L+
Sbjct: 509 FVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQV 568
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV P+ T++++ CA + LG + G I K V + ++++ + K G + +
Sbjct: 569 GVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDS 628
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
R +F++ KRD V+W+ + I Y G E
Sbjct: 629 RIMFEKAPKRDYVTWSAM-------------------------------ICAYAYHGLGE 657
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNAL 357
+A +LF +M + KPN + F VL A A + + G+H + G++ + + +
Sbjct: 658 DAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCM 717
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+DL + G+ + + +S+ + A V W +++G L G +E A++ +++ + +
Sbjct: 718 VDLLGRSGQVNEALELIESMPFE--ADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQ 775
Query: 418 SWSAII 423
SA +
Sbjct: 776 DSSAYV 781
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 118/290 (40%), Gaps = 58/290 (20%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K TFS + +++ ++ GK H +I GF VF+ L Y K ++ + VFD
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 511 RMPDKNEISWTVMVRGLA-------------------------------ESGYAKESINL 539
+MP ++ ISW M+ G A ++G+ ++SI +
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY-FNSMEPIYNIKPNGRHYTCVVDML 598
F +M I + T VL AC +G+ D GL + + + T +VDM
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKAC--TGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMY 215
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
S +L A + MP E +S W+++++G +N++ E L+K V
Sbjct: 216 STCKKLDHAFNIFCEMP-ERNSVCWSAVIAG--YVRNDRFTEGL--KLYK---------V 261
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
+L + M V + R G S E+ Q+H + KT+
Sbjct: 262 MLD----------EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTN 301
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 313/573 (54%), Gaps = 36/573 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIND 199
F++ P N+ +W I F + + L +F+++L ES PN TF + KA E++
Sbjct: 87 FDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSS 146
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G ++ G++ KA F + + NSLI
Sbjct: 147 LLAGQAIHGMVMKASFGSDLFISNSLIHF------------------------------- 175
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ +GDL A +F ++ E++ VSW+ MI+ + Q G PEEA +LF++M + +PN
Sbjct: 176 YSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTM 235
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
VLSA A L G ++ + GI+ ++ +SNA++D+Y KCG +D R +FD + E
Sbjct: 236 VGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEE 295
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
KD+ VSW +MI GY G + A+ +FD MP+ + +W+A+IS Y ++ + A+F
Sbjct: 296 KDI---VSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIF 352
Query: 440 NEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
E+ L+ PN+ T +S L A A + +++ G +H I K G + + T+L D Y+K
Sbjct: 353 RELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSK 412
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G +E + VF + ++ W+ M+ GLA G+ + +I+LF +M++T + PN +T ++
Sbjct: 413 CGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNL 472
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSHSGLVD+G +FN M P+Y + P +HY C+VD+L R+G L EA + I MP P
Sbjct: 473 LCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVP 532
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
++ W +LL C+ Y N ++AE A L + + YVLLSNIYA AG+W +R+
Sbjct: 533 SASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQ 592
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
M GL K GCS +EV +H F + +P
Sbjct: 593 HMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHP 625
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 206/396 (52%), Gaps = 42/396 (10%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI + G ++ + F + ++++SW + I GFVQ G EAL+LF ++ +P
Sbjct: 171 SLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARP 230
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N VT + ACA+ D G I + G + ++ + N+++ + +K G ++ AR +F
Sbjct: 231 NRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLF 290
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D+ME++D+VSWT ++D + ++GD ARR+FD MP + +W+ +I+ Y Q+G P+EA
Sbjct: 291 DKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALA 350
Query: 303 LFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+FR++ + KPN + L+A A L A+ G +H ++ K GI+ + I+ +LID+Y
Sbjct: 351 IFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMY 410
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKCG + VF S+ +D V W++MI G ++G A +LF M +
Sbjct: 411 SKCGHLEKALEVFYSVERRD---VFVWSAMIAGLAMHGHGRAAIDLFSKMQE-------- 459
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ PN TF+++LCA + +++G+ ++ +
Sbjct: 460 -----------------------TKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV- 495
Query: 482 FPYDVFLGT----ALTDTYAKSGDIESSRRVFDRMP 513
Y V G+ + D ++G +E + + ++MP
Sbjct: 496 --YGVVPGSKHYACMVDILGRAGCLEEAVELIEKMP 529
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 192/380 (50%), Gaps = 15/380 (3%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK-PNTSCFSIVLS 324
L A ++FD++P N +W+ +I + S P + +F QM S + PN+ F V+
Sbjct: 80 LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + +L +G +H V+K D+FISN+LI YS G+ LVF IVEKD
Sbjct: 140 AATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKD--- 196
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE--HKQFDLVFA--VFN 440
+VSWNSMI G+ G EEA +LF M N + G L K+ DL F +
Sbjct: 197 IVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACD 256
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+ +G N +++L SLE + L K+ + D+ T + D YAK G
Sbjct: 257 YIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEE----KDIVSWTTMIDGYAKVG 312
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-PNELTILSVL 559
D +++RRVFD MP ++ +W ++ ++G KE++ +F E++ T PNE+T+ S L
Sbjct: 313 DYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTL 372
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
AC+ G +D G + + IK N T ++DM S+ G L +A + S+ D
Sbjct: 373 AACAQLGAMDLG-GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE-RRD 430
Query: 620 SNAWASLLSGCKTYKNEQIA 639
W+++++G + + + A
Sbjct: 431 VFVWSAMIAGLAMHGHGRAA 450
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 11/307 (3%)
Query: 83 NGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NG D L++ N M++ ++ G+LE+A+RLFD M E++ VSWT +I G+ K G + +
Sbjct: 261 NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRV 320
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEIND 199
F+ P +++ +W A I + QNG EAL +F +L L KPNEVT +S ACA++
Sbjct: 321 FDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGA 380
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG + I K G + + + SLI + K G ++ A VF +E+RDV W+ ++
Sbjct: 381 MDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAG 440
Query: 260 FIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKP 314
G A +F +M E N V+++ ++ + SG +E F QM Y P
Sbjct: 441 LAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVP 500
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ ++ ++ L L + + + K+ I + AL+ G + +
Sbjct: 501 GSKHYACMVDILGRAGCLEEAVEL---IEKMPIVPSASVWGALLGACRIYGNVELAEMAC 557
Query: 375 DSIVEKD 381
++E D
Sbjct: 558 SRLLETD 564
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 38/330 (11%)
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
K N S I++ A+ K L+ +HAH+L+ G+ F + L++ C + L
Sbjct: 27 KSNPSTVPILIDKCANKKHLK---QLHAHMLRTGL---FFDPPSATKLFTACALSSPSSL 80
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+ A ++FD +P+ N +W+ +I + +
Sbjct: 81 DY-----------------------------ACKVFDQIPRPNLYTWNTLIRAFASSPKP 111
Query: 433 DLVFAVFNEMLL-SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
VF +ML S PN TF V+ A+ V+SL G+ +HG ++K F D+F+ +
Sbjct: 112 IQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNS 171
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L Y+ GD++S+ VF ++ +K+ +SW M+ G + G +E++ LF+ M+ + PN
Sbjct: 172 LIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPN 231
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+T++ VL AC+ ++ G + +E I N ++DM + G L +A
Sbjct: 232 RVTMVGVLSACAKRIDLEFGRWACDYIER-NGIDINLILSNAMLDMYVKCGSLEDARRLF 290
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
+ M E D +W +++ G + A R
Sbjct: 291 DKME-EKDIVSWTTMIDGYAKVGDYDAARR 319
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/590 (33%), Positives = 318/590 (53%), Gaps = 65/590 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI + G E + F+ +++++SWT + +V+N E+LKLF ++ G K
Sbjct: 184 TALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFK 243
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN TF+S+ KAC + F +G +V G FK + + + V LI
Sbjct: 244 PNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELI--------------- 288
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
D++I+ GD+ +A ++F+EMP+ + + WS MIARY QS EEA
Sbjct: 289 ----------------DLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAI 332
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F +M R PN + +L A ASL L+ G +H HV+K+G++ +VF+SNAL+D+Y
Sbjct: 333 EMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMY 392
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG +ME + +LF P DVSW+
Sbjct: 393 AKCG----------------------------------RMENSLQLFSESPNCTDVSWNT 418
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I GY++ + +F +ML + T+SSVL A A +A+LE G +H +K
Sbjct: 419 VIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTI 478
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ + +G AL D YAK G+I+ +R VFD + + +++SW M+ G + G E++ FE
Sbjct: 479 YDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFE 538
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M +T P+++T + +L ACS++GL+D+G YF SM Y+I+P HYTC+V +L RS
Sbjct: 539 SMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRS 598
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L +A ++ +PFEP W +LLS C + + ++ + + + ++ E A +VLLS
Sbjct: 599 GHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLS 658
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
NIYA+A RW + ++R M KG+RK G SW+E + +VH+F +P
Sbjct: 659 NIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHP 708
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 191/382 (50%), Gaps = 38/382 (9%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D+ + ++L+ +++ L +A ++FDEMP+RN VS+ +I Y+Q EA LF ++
Sbjct: 78 DLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQ 137
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+ N FS VL L S + + G VHA V K+G + D F+ ALID YS CG
Sbjct: 138 GEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYA- 196
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
E A+++FD + ++ VSW+ +++ Y+E
Sbjct: 197 ---------------------------------ECARQVFDAIEYKDMVSWTGMVACYVE 223
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
++ F+ +F+ M + G PN TF+SVL A + GK +HG K + ++F+
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G L D Y KSGD++ + +VF+ MP + I W+ M+ A+S ++E+I +F M + +
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLV 343
Query: 549 TPNELTILSVLFACSHSGLVDKGL-KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
PN+ T+ S+L AC + LVD L + + N ++DM ++ GR+ +
Sbjct: 344 LPNQFTLASLLQAC--ASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENS 401
Query: 608 EDFINSMPFEPDSNAWASLLSG 629
+ P D +W +++ G
Sbjct: 402 LQLFSESPNCTDV-SWNTVIVG 422
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 171/386 (44%), Gaps = 51/386 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+A+HG KT +E ++ L+ +Y+ S +A ++ +++ D++ + MI Q
Sbjct: 265 GKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQ 324
Query: 100 WGNLEEAQRLF----DGMPERNEVSWTALISG---------------------------- 127
EEA +F G+ N+ + +L+
Sbjct: 325 SEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFV 384
Query: 128 -------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+ K GR+E S+ F +P +SW I G+VQ G +AL LF +LE V
Sbjct: 385 SNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQV 444
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ EVT+SS+ +ACA I G + L K ++K+ V N+LI + K G + AR
Sbjct: 445 QGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARL 504
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGY 296
VFD + + D VSW ++ + G GEA + F+ M E ++V++ +++ + +G
Sbjct: 505 VFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGL 564
Query: 297 PEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFI 353
+ F+ M Y +P ++ ++ L RSG A L +I E V +
Sbjct: 565 LDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLG-----RSGHLDKAAKLVHEIPFEPSVMV 619
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVE 379
AL+ + + GR+ ++E
Sbjct: 620 WRALLSACVIHNDVELGRISAQRVLE 645
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 310/567 (54%), Gaps = 36/567 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N +SW I G + AL L++ ++ G+ PN TF + K+CA+ + G +
Sbjct: 42 NQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIH 101
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
I K G + V SLI++ + G V+ A VFD RDVVS+T ++ + G++
Sbjct: 102 AQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMD 161
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A+++FDE+P ++ VSW+ MI+ Y + G +EA LF +M + KP+ S + VLS
Sbjct: 162 KAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCT 221
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+ G +H+ + G ++ + NALIDLYSKCGE + +F+ + KD V+S
Sbjct: 222 HSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKD---VIS 278
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN++IGGY Y+ H + L+ VF EML GE
Sbjct: 279 WNTLIGGY-----------------------------AYINHHKEALL--VFQEMLKLGE 307
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIK--LGFPYDVFLGTALTDTYAKSGDIESS 505
PN T S+L A A + +++ G+ +H I K G + L T+L D YAK G+IE++
Sbjct: 308 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+VFD + +K+ S M+ G A G A + +L M+K I P+++T + +L ACSH+
Sbjct: 368 NQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHA 427
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GL D G K F SM Y I+P HY C++D+L RSG EAE+ INSM EPD W S
Sbjct: 428 GLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGS 487
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL CK +KN ++ E + L K+ ++P YVLLSNIYA++ RW D VR L+ +KGL
Sbjct: 488 LLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGL 547
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K GCS +E+ + VH F +P+
Sbjct: 548 KKVPGCSSIEIDSMVHEFLIGDKFHPQ 574
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 211/439 (48%), Gaps = 54/439 (12%)
Query: 33 SQNLVIQGRAL----------HGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
S N +I+G AL + ++I G+ Y L S+ + E +I +
Sbjct: 45 SWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQI 104
Query: 83 NGF----DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
+ DL VH +I+ Q G +E+A ++FD R+ VS+TA+I+G+ G ++++
Sbjct: 105 LKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQ 164
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
F+ P ++V+SW A I G+ + G EAL+LF ++++ VKP+E T +++ C
Sbjct: 165 KMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSG 224
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+ LG + I GF ++ + N+LI L K GE++ A +F+ ++ +DV+SW
Sbjct: 225 NVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISW----- 279
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ +I Y + +EA +F++M + PN
Sbjct: 280 --------------------------NTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT 313
Query: 319 FSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+L A A L A+ G +H ++ K GI + + +LID+Y+KCG + VFD+
Sbjct: 314 MLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDT 373
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQF 432
I+ K ++ S N+MI G+ ++G+ + A +L M K +D+++ ++S
Sbjct: 374 ILNKSLS---SCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLS 430
Query: 433 DLVFAVFNEMLLSGEIPNK 451
DL +F M L I K
Sbjct: 431 DLGRKIFKSMTLDYRIEPK 449
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 189/500 (37%), Gaps = 139/500 (27%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY- 66
++ I+ S NSY T L K +G+ +H ++K G+ + ++ T L+ MY
Sbjct: 67 VYMISLGLSPNSY--TFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYA 124
Query: 67 -----------------------------LGSRKSLE-ANEIVKDLNGFDLVVHNCMINA 96
SR +++ A ++ ++ D+V N MI+
Sbjct: 125 QNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISG 184
Query: 97 NIQWGNLEEAQRLFDGM------PERNEV--------------------SW--------- 121
+ G +EA LF+ M P+ + + SW
Sbjct: 185 YAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSN 244
Query: 122 ----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
ALI + K G +E + FE +++VISW I G+ EAL +F ++L+
Sbjct: 245 LKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLK 304
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK--AGFEKHVSVCNSLITLSLKMGEV 235
G PN+VT SI ACA + +G + I K G + S+ SLI + K G +
Sbjct: 305 LGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNI 364
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
+ A VFD + + + S + MI + G
Sbjct: 365 EAANQVFDTILNKSL-------------------------------SSCNAMIFGFAMHG 393
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
+ AF L +M + +P+ F +LSA + HA + +G + +F S
Sbjct: 394 RADAAFDLLSRMKKDGIEPDDITFVGLLSACS-----------HAGLSDLG--RKIFKS- 439
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+ D +E + H + MI G +G +EA+EL ++M
Sbjct: 440 ----------------MTLDYRIEPKLEH---YGCMIDLLGRSGLFKEAEELINSMTMEP 480
Query: 416 D-VSWSAIISGYLEHKQFDL 434
D V W +++ HK +L
Sbjct: 481 DGVIWGSLLKACKIHKNLEL 500
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 215/725 (29%), Positives = 371/725 (51%), Gaps = 104/725 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ + + GR + + +G+ + L +L+ MY+ E + L+
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPE----RNEVSWTALISGFMKHGRVEE------ 136
+ + N MI+ GN E+ LF M E N ++++++ F RVEE
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 137 ------------------SMWY-----------FERNPFQNVISWTAAICGFVQNGFSFE 167
S ++ F+ ++VISW + I G+V+NG
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+++F+K+L GV + T ++ ACA I LG L +
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLG-------------------KVLHS 376
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
S+K +D R+V +LD++ + GDL A R+F+ M E+ VSW+ M
Sbjct: 377 YSIKAATLD-----------REVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSM 425
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I Y + G + A +LF +M P+ + +L+A A L+SG VH ++ + +
Sbjct: 426 ITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNL 485
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E + F+SNAL D+Y+KC G M++A ++
Sbjct: 486 ETNSFVSNALTDMYAKC----------------------------------GSMKDAHDV 511
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F +M K++ +SW+ +I GY ++ + +F EM + P+ +T + +L A AS+A+L
Sbjct: 512 FSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESK-PDGTTVACILPACASLAAL 570
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+KG+++HG ++ G+ D ++ A+ D Y K G + +R +FD +P+K+ +SWTVM+ G
Sbjct: 571 DKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGY 630
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
GY E+IN F +M T I P+E++ +S+L+ACSHSGL+D+G K FN M+ I+PN
Sbjct: 631 GMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPN 690
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C+VD+L+R+G L +A FI +MP +PD+ W +LL GC+ + + ++AE+ + ++
Sbjct: 691 LEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIF 750
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L E+ YVLL+NIYA A +W + +RK + ++GL+K+ GCSW+E++ +++ F
Sbjct: 751 ELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGD 810
Query: 708 DHNPK 712
P+
Sbjct: 811 CSKPQ 815
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 124/308 (40%), Gaps = 81/308 (26%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C+L S + +GR +HG+ ++ G +++Y+T ++ MY
Sbjct: 556 TVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMY---------------- 599
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++ G L A+ LFD +P ++ VSWT +I+G+ H
Sbjct: 600 ---------------VKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMH----------- 633
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
G+ EA+ F ++ +G++P+EV+F SI AC+
Sbjct: 634 --------------------GYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDE 673
Query: 203 GLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVIL--- 257
G +F ++ K E ++ ++ L + G + A M K D W +L
Sbjct: 674 GWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGC 733
Query: 258 ----DVFIEMGDLGE--ARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRY 310
DV L E A RIF+ PE + V++A Y ++ EE +L +++ +
Sbjct: 734 RIHHDV-----KLAEKVAERIFELEPE--NTGYYVLLANIYAEAEKWEEVQKLRKKIGQR 786
Query: 311 SFKPNTSC 318
K N C
Sbjct: 787 GLKKNPGC 794
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 337/635 (53%), Gaps = 36/635 (5%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I++ L + ++N +++A + A+R+FD +P+ N SW L+ + K G + E
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAE 196
FE+ P ++ ++W I G+ +G A+K + ++ VT ++ K +
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
LG + G + K GFE ++ V + L+ + +G + A+ VF ++ R+ V + +
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + G + +A ++F M E++ VSW+ MI Q+G +EA FR+M K +
Sbjct: 212 MGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F VL A L A+ G +HA +++ + +++ +ALID+Y KC
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK----------- 319
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ AK +FD M ++N VSW+A++ GY + + +
Sbjct: 320 -----------------------CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F +M SG P+ T + A A+V+SLE+G HGK I G + V + +L Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K GDI+ S R+F+ M ++ +SWT MV A+ G A E+I LF++M + + P+ +T+
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
V+ ACS +GLV+KG +YF M Y I P+ HY+C++D+ SRSGRL EA FIN MPF
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
PD+ W +LLS C+ N +I + A ++L +L HPAGY LLS+IYAS G+W +
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R+ M EK ++K G SW++ + ++H F + +P
Sbjct: 597 RRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 246/506 (48%), Gaps = 35/506 (6%)
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
C N R + G I +A + N+++ M AR VFDR+ + ++
Sbjct: 13 CIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL 72
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
SW +L + + G + E F+++P+R+ V+W+V+I Y+ SG A + + M R
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR- 131
Query: 311 SFKPNTSCFSI--VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
F N + ++ +L +S + G +H V+K+G E + + + L+ +Y+ G
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
D + VF + +++ V +NS++GG G +E+A +LF M K + VSW+A+I G +
Sbjct: 192 DAKKVFYGLDDRN---TVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQ 247
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ F EM + G ++ F SVL A + ++ +GK +H II+ F +++
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G+AL D Y K + ++ VFDRM KN +SWT MV G ++G A+E++ +F +M+++ I
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRL 604
P+ T+ + AC++ +++G ++ I HY V V + + G +
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKA-----ITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNE----QIAERAVKNLWKLAEEHPAGYVLL 660
++ N M D+ +W +++S + Q+ ++ V++ K P G L
Sbjct: 423 DDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK-----PDGVTLT 476
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLR 686
I A + R + EKG R
Sbjct: 477 GVISACS---------RAGLVEKGQR 493
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/567 (24%), Positives = 249/567 (43%), Gaps = 110/567 (19%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL 62
A++++ ++ + S N T + +LK +S V G+ +HG +IK G + + L
Sbjct: 121 AAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
L MY AN+ G + +A+++F G+ +RN V +
Sbjct: 181 LYMY-----------------------------ANV--GCISDAKKVFYGLDDRNTVMYN 209
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+L+ G + G +E+++ F R ++ +SW A I G QNG + EA++ F ++ G+K
Sbjct: 210 SLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
++ F S+ AC + G + I + F+ H+ V ++LI + K + A++VF
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
DRM++++VVSWT M+ Y Q+G EEA +
Sbjct: 329 DRMKQKNVVSWT-------------------------------AMVVGYGQTGRAEEAVK 357
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F M R P+ +SA A++ +L G H + G+ V +SN+L+ LY
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ D +F+ E +V VSW +M+ Y G+ E +LFD M
Sbjct: 418 KCGDIDDSTRLFN---EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM----------- 463
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLG 481
++H G P+ T + V+ A + +EKG+ + + G
Sbjct: 464 ----VQH----------------GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESG------YAK 534
+ + + D +++SG +E + R + MP + I WT ++ G +A
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563
Query: 535 ESINLFEEMEKTSITPNELTILSVLFA 561
ES+ +E P T+LS ++A
Sbjct: 564 ESL-----IELDPHHPAGYTLLSSIYA 585
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/642 (32%), Positives = 332/642 (51%), Gaps = 75/642 (11%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
+++ V N +++ + G E A+++FD M ER
Sbjct: 178 WNVFVGNGLVSMYGRCGAWENARQVFDEMRERG--------------------------- 210
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEINDFRLG 203
+++SW + + ++Q G S A+K+F ++ E G++P+ V+ ++ ACA + + G
Sbjct: 211 -VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 269
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V G ++G + V V N+++ + K G ++ A VF+RM+ +DVVSW ++ + ++
Sbjct: 270 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQI 329
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
G +A +F+++ E N V+WS +IA Y Q G EA +FRQM +PN
Sbjct: 330 GRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTL 389
Query: 320 SIVLSALASLKALRSGMHVHAHVLK--IGIEK-----DVFISNALIDLYSKCGETKDGRL 372
+LS AS L G H H +K + +++ D+ + NALID+YSKC K R
Sbjct: 390 VSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARA 449
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+FD I KD R+ V+W+ +I G +H +
Sbjct: 450 MFDLIPPKD--------------------------------RSVVTWTVLIGGNAQHGEA 477
Query: 433 DLVFAVFNEMLLSGE--IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-VFLG 489
+ +F++ML +PN T S L A A + +L G+ +H +++ F +F+
Sbjct: 478 NEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVA 537
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
L D Y+KSGD++++R VFD M +N +SWT ++ G G +E++ +F EM+K +
Sbjct: 538 NCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLV 597
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+ +T + VL+ACSHSG+VD+G+ YFN M + + P HY C+VD+LSR+GRL EA +
Sbjct: 598 PDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAME 657
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
I MP +P W +LLS C+ Y N ++ E A L +L + Y LLSNIYA+A
Sbjct: 658 LIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARC 717
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
W D +R LM G++K GCSWV+ R FF +P
Sbjct: 718 WKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHP 759
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 180/605 (29%), Positives = 291/605 (48%), Gaps = 76/605 (12%)
Query: 90 HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-NPF-Q 147
H C A+ + L Q L G+P T +IS ++ +++ R +P
Sbjct: 56 HQCKSLASAE---LTHQQLLVQGLPHDP----THIISMYLTFNSPAKALSVLRRLHPSSH 108
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
V W I V GF + L+L+ ++ G +P+ TF + KAC EI FR G SV
Sbjct: 109 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 168
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR---DVVSWTVILDVFIEMG 264
++F +GFE +V V N L+++ + G + AR VFD M +R D+VSW I+ +++ G
Sbjct: 169 AVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGG 228
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
D A ++F+ M E +P+ VL
Sbjct: 229 DSIRAMKMFERMTE------------------------------DLGIRPDAVSLVNVLP 258
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A AS+ A G VH + L+ G+ +DVF+ NA++D+Y+KCG ++ VF+ + KD
Sbjct: 259 ACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD--- 315
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFN 440
VVSWN+M+ GY G+ ++A LF+ + + N V+WSA+I+GY + VF
Sbjct: 316 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 375
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY-------DVFLGTALT 493
+MLL G PN T S+L AS +L GK+ H IK D+ + AL
Sbjct: 376 QMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 435
Query: 494 DTYAKSGDIESSRRVFDRMP--DKNEISWTVMVRGLAESGYAKESINLFEEMEKTS--IT 549
D Y+K +++R +FD +P D++ ++WTV++ G A+ G A E++ LF +M + +
Sbjct: 436 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 495
Query: 550 PNELTILSVLFACSHSGLVDKGLKYF-----NSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
PN TI L AC+ G + G + N E N C++DM S+SG +
Sbjct: 496 PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVAN-----CLIDMYSKSGDV 550
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH--PAGYVLLSN 662
A ++M + + +W SL++G Y E A++ +++ + P G +
Sbjct: 551 DAARVVFDNM-HQRNGVSWTSLMTG---YGMHGRGEEALQIFYEMQKVXLVPDGVTFVVV 606
Query: 663 IYASA 667
+YA +
Sbjct: 607 LYACS 611
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 194/384 (50%), Gaps = 67/384 (17%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +HG+ +++G+ + D+ V N +++
Sbjct: 268 RGKQVHGYALRSGLFE-------------------------------DVFVGNAVVDMYA 296
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ----NVISWTA 154
+ G +EEA ++F+ M ++ VSW A+++G+ + GR ++++ FE+ + NV++W+A
Sbjct: 297 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 356
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I G+ Q G FEAL +F ++L G +PN VT S+ CA G
Sbjct: 357 VIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAG-----------TLLHG 405
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
E H C++ I L + E D D++ ++D++ + AR +FD
Sbjct: 406 KETH---CHA-IKWILNLDEND---------PGDDLMVINALIDMYSKCKSPKAARAMFD 452
Query: 275 EMP--ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS--FKPNTSCFSIVLSALASLK 330
+P +R+ V+W+V+I Q G EA LF QM + PN S L A A L
Sbjct: 453 LIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLG 512
Query: 331 ALRSGMHVHAHVLKIGIEKD-VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
ALR G +HA+VL+ E +F++N LID+YSK G+ R+VFD++ +++ VSW
Sbjct: 513 ALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN---GVSWT 569
Query: 390 SMIGGYGLNGQMEEAKELFDNMPK 413
S++ GYG++G+ EEA ++F M K
Sbjct: 570 SLMTGYGMHGRGEEALQIFYEMQK 593
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 217/666 (32%), Positives = 346/666 (51%), Gaps = 78/666 (11%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+ V +N M++A + G ++EA+ LFDGMP RN VSW A+I+ HGRV ++ F+R P
Sbjct: 48 NTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRVADARGLFDRMP 107
Query: 146 FQNVISWT--------------------------------AAICGFVQNGFSFEALKLFL 173
++ SWT A I G+ +NG +A+KL
Sbjct: 108 SRDDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLR 167
Query: 174 K---------------LLESG------------VKPNEVTFSSICKACAEINDFRLGLSV 206
+ L +SG V+ + V+++ + + D S
Sbjct: 168 EMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASF 227
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
FG I V++ N + G + AR +FDRM +R+VV+ V+LD ++ + L
Sbjct: 228 FGRIESPNVVSWVTLLNGYC----RAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRL 283
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL--S 324
EA ++FDEMP +N +SW+ +I+ ++G +EA L +M+ T+ L +
Sbjct: 284 EEACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRN 343
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ + + GM VH D N +I Y + G ++ L+F + KD
Sbjct: 344 MVNDARQIFDGMEVH----------DTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDT-- 391
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VSWN+MI GY GQM +A +F M ++N VSW+++ISG++++ F F F M
Sbjct: 392 -VSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRR 450
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ ST++S L A A++A+L G+ LH +++ G D+F AL TYAK G +
Sbjct: 451 GTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLE 510
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
++++FD M K+ +SW +V G A +G E+I++F EME + P+E+T + +L ACS
Sbjct: 511 AKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSR 570
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+GL+D+GL +FNSM Y++KP HY C+ D+L R+G+L+EA + + M +P++ W
Sbjct: 571 AGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWG 630
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL C+ YKN ++A A + L +L + YVLLSNI A AG+W +A R + EKG
Sbjct: 631 ALLGACQMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKG 690
Query: 685 LRKSGG 690
K G
Sbjct: 691 ANKPPG 696
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 206/425 (48%), Gaps = 54/425 (12%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLT------TRLLIMYLGSRKSLEANEIVKDL 82
KD+ S NL+++G G L R + LL Y + + +A ++ +
Sbjct: 203 KDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRM 262
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++V N M++ ++ LEEA +LFD MP +N +SWT +ISG + G+++E+ +
Sbjct: 263 PERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLD 322
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ F V + TA + G++Q +A ++F
Sbjct: 323 KMSFNCVAAKTALMHGYLQRNMVNDARQIF------------------------------ 352
Query: 203 GLSVFGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G E H +VC N++I+ ++ G ++ A +F RM +D VSW ++ +
Sbjct: 353 ----------DGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYA 402
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G + +A IF M +N VSW+ +I+ + Q+G +AF F M R + + + S ++
Sbjct: 403 QGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYAS 462
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L A A+L AL G +H+ +++ G D+F NALI Y+KCG + + +FD +V KD
Sbjct: 463 CLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKD 522
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFA 437
+VSWN+++ GY NGQ EA +F M + ++V++ I+S D
Sbjct: 523 ---IVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLG 579
Query: 438 VFNEM 442
FN M
Sbjct: 580 FFNSM 584
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 226/503 (44%), Gaps = 52/503 (10%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N +T + G++ AR +FD M +R+ V++ +L G + EAR +FD MP RN V
Sbjct: 22 NQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAV 81
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ MIA + G +A LF +M P+ FS + + S A + + V
Sbjct: 82 SWNAMIAALSDHGRVADARGLFDRM------PSRDDFS--WTVMVSCYARAGELELARDV 133
Query: 343 L-KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
L ++ +K NA+I Y+K G D + + D + SWNS + G +GQM
Sbjct: 134 LDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPD---LFSWNSALAGLTQSGQM 190
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
A + FD M +++ VSW+ ++ G++ D + F + E PN ++ ++L
Sbjct: 191 VRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRI----ESPNVVSWVTLLNGY 246
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+ +DL ++ + +V + D Y + +E + ++FD MP KN ISWT
Sbjct: 247 CRAGRISDARDLFDRMPE----RNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWT 302
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ GLA +G +E+ +L ++M + + L +V+ + F+ ME
Sbjct: 303 TIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYL----QRNMVNDARQIFDGMEV- 357
Query: 582 YNIKPNGRHYT-CVVDMLS---RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
H T C M+S + G L EA MP D+ +W ++++G Y
Sbjct: 358 --------HDTVCWNTMISGYVQRGMLEEAMLLFQRMP-NKDTVSWNTMIAG---YAQGG 405
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM---TEKG--------LR 686
+A+ +++ ++ + + + + G ++DA + LM T + LR
Sbjct: 406 QMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLR 465
Query: 687 KSGGCSWVEVRNQVHFFFQKTDH 709
+ + V Q+H ++ H
Sbjct: 466 ACANLAALHVGRQLHSLLVRSGH 488
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 148/294 (50%), Gaps = 11/294 (3%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T L+ YL +A +I + D V N MI+ +Q G LEEA LF MP ++ V
Sbjct: 333 TALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTV 392
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +I+G+ + G++ +++ F R +N +SW + I GFVQNG +A F+ +
Sbjct: 393 SWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGT 452
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ + T++S +ACA + +G + L+ ++G + N+LI+ K G + A+
Sbjct: 453 NRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAK 512
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSG 295
+FD M +D+VSW ++D + G EA +F EM +EV++ +++ +++G
Sbjct: 513 QIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAG 572
Query: 296 YPEEAFRLFRQMT-RYSFKP---NTSCFSIVLSALASLK---ALRSGMHVHAHV 342
+E F MT YS KP + +C + +L L L GM + +
Sbjct: 573 LIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNA 626
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 203/566 (35%), Positives = 319/566 (56%), Gaps = 41/566 (7%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ I F +NG +A+ LF +L E G+ P+ T+ + KA + + R G V+G +
Sbjct: 100 YNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVV 159
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K+G E VCNSL +D++ E+G + R+
Sbjct: 160 KSGLEFDTYVCNSL-------------------------------MDMYAEVGRVQNLRQ 188
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLK 330
+F+EMP+R+ VSW+V+I+ Y + E+A +FR+M + S +PN + LSA +LK
Sbjct: 189 VFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALK 248
Query: 331 ALRSGMHVHAHVL-KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G +H +V ++G + I NAL+D+Y KCG R +F+ + + V+ W
Sbjct: 249 MLELGKEIHRYVREQLGF--TIKIGNALVDMYCKCGHLSIAREIFNDM---PIKTVICWT 303
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SM+ GY GQ++EA+ELF+ P R+ V W+A+I+GY++ +FD A+F EM + P
Sbjct: 304 SMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSP 363
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
++ T ++L A + +LE+GK +HG I + D +GTAL + YAK G IE S +F
Sbjct: 364 DRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIF 423
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+ + +K+ SWT ++ GLA +G +++ LF EM +T + P+++T + VL ACSH GLV+
Sbjct: 424 NGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVE 483
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FEPDSNAWASL 626
+G K+F SM +Y I+P HY C++D+L R+G+L EAE+ I P E + +L
Sbjct: 484 EGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGAL 543
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
LS C+T+ N ++ ER K L + + + LL+NIYASA RW D VR+ M + G++
Sbjct: 544 LSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVK 603
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNPK 712
K GCS VEV VH F +P+
Sbjct: 604 KVPGCSSVEVNGIVHEFLVGDASHPE 629
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 206/447 (46%), Gaps = 53/447 (11%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+VK FD V N +++ + G ++ +++F+ MP+R+ VSW LISG++K R E++
Sbjct: 158 VVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDA 217
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+ F R Q S ++PNE T S AC +
Sbjct: 218 VDVFRRMQQQ------------------------------SSLRPNEATVVSTLSACIAL 247
Query: 198 NDFRLGLSVFGLIF-KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
LG + + + GF + + N+L+ + K G + +AR +F+ M + V+ WT +
Sbjct: 248 KMLELGKEIHRYVREQLGFT--IKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSM 305
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ ++ G L EAR +F+ P R+ V W+ MI Y Q ++A LFR+M P+
Sbjct: 306 VSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDR 365
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+L+ A L L G +H ++ + I D + ALI++Y+KCG + +F+
Sbjct: 366 FTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNG 425
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIIS-----GYL 427
+ EKD A SW S+I G +NG+ +A ELF M K +D+++ ++S G +
Sbjct: 426 LKEKDTA---SWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLV 482
Query: 428 E--HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
E K F + AV+ P + ++ L++ ++L K +
Sbjct: 483 EEGRKHFRSMTAVYQIE------PKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVI 536
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRM 512
V L AL G++E RV R+
Sbjct: 537 VPLYGALLSACRTHGNVEMGERVAKRL 563
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 187/398 (46%), Gaps = 67/398 (16%)
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+G+L A RIF+ + ++++I + ++G +A LFRQ+ P+ + V
Sbjct: 79 IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
A+ L +R G V+ V+K G+E D ++ N+L+D+Y++ G ++ R VF+ + ++D
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRD- 197
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VVSWN +I GY + E+A ++F M +++ +
Sbjct: 198 --VVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLR------------------------ 231
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
PN++T S L A ++ LE GK++H + ++ + + +G AL D Y K G +
Sbjct: 232 ------PNEATVVSTLSACIALKMLELGKEIH-RYVREQLGFTIKIGNALVDMYCKCGHL 284
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE--------------------- 541
+R +F+ MP K I WT MV G G E+ LFE
Sbjct: 285 SIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFN 344
Query: 542 ----------EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
EM+ ++P+ T++++L C+ G +++G K+ + I +
Sbjct: 345 RFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQG-KWIHGYIDENKIMIDAVVG 403
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T +++M ++ G + ++ + N + E D+ +W S++ G
Sbjct: 404 TALIEMYAKCGFIEKSLEIFNGLK-EKDTASWTSIICG 440
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 148/290 (51%), Gaps = 13/290 (4%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
E + V++ GF + + N +++ + G+L A+ +F+ MP + + WT+++SG++ G+
Sbjct: 255 EIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQ 314
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
++E+ FER+P ++V+ WTA I G+VQ +A+ LF ++ V P+ T ++
Sbjct: 315 LDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTG 374
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CA++ G + G I + V +LI + K G ++ + +F+ ++++D SW
Sbjct: 375 CAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASW 434
Query: 254 TVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
T I+ G +A +F EM + +++++ +++ + G EE + FR MT
Sbjct: 435 TSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTA 494
Query: 310 -YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
Y +P + ++ L R+G A L IEK ++N +I
Sbjct: 495 VYQIEPKLEHYGCLIDLLG-----RAGQLDEAEEL---IEKSPNVNNEVI 536
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 140/323 (43%), Gaps = 63/323 (19%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM------ 113
T ++ Y+ + EA E+ + D+V+ MIN +Q+ ++A LF M
Sbjct: 303 TSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVS 362
Query: 114 PER---------------------------------NEVSWTALISGFMKHGRVEESMWY 140
P+R + V TALI + K G +E+S+
Sbjct: 363 PDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEI 422
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE---I 197
F ++ SWT+ ICG NG + +AL+LF +++++GVKP+++TF + AC+ +
Sbjct: 423 FNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLV 482
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+ R +++ E + LI L + G++D A + +EK V+ VI+
Sbjct: 483 EEGRKHFRSMTAVYQ--IEPKLEHYGCLIDLLGRAGQLDEAEEL---IEKSPNVNNEVIV 537
Query: 258 DVF------------IEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLF 304
++ +EMG+ A+R+ E + S ++A Y + E+ ++
Sbjct: 538 PLYGALLSACRTHGNVEMGE-RVAKRLVG--IESGDSSVHTLLANIYASADRWEDVTKVR 594
Query: 305 RQMTRYSFKPNTSCFSIVLSALA 327
R+M K C S+ ++ +
Sbjct: 595 RKMKDLGVKKVPGCSSVEVNGIV 617
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 219/717 (30%), Positives = 345/717 (48%), Gaps = 104/717 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L QGR +H K G E ++ ++ +YL A + D+ D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PERNEVSWT------------------ 122
V N +I+ + Q G+ E A +F+ M P+ +S
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 123 ---------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
+L+ ++K G VE ++ F + NV+ W + F Q +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ +LF ++ +G++PN+ T+ I + C + LG + L K GFE + V LI
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K G ++ AR V + ++++DVVSWT M
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWT-------------------------------SM 417
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q ++A F++M + P+ + +S A + A+R G+ +HA + G
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV I NAL++LY++CG ++ F+ I KD ++WN ++ G+ +G EEA
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKD---EITWNGLVSGFAQSGLHEEA--- 531
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
VF M SG N TF S L ASA++A +
Sbjct: 532 ----------------------------LKVFMRMDQSGVKHNVFTFVSALSASANLAEI 563
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +H ++IK G ++ +G AL Y K G E ++ F M ++NE+SW ++
Sbjct: 564 KQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSC 623
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ G E+++LF++M+K I PN++T + VL ACSH GLV++GL YF SM Y I+P
Sbjct: 624 SQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPR 683
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CV+D+ R+G+L A+ FI MP D+ W +LLS CK +KN ++ E A K+L
Sbjct: 684 PDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLL 743
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+L A YVLLSN YA +W + VRK+M ++G+RK G SW+EV+N VH FF
Sbjct: 744 ELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFF 800
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 138/528 (26%), Positives = 246/528 (46%), Gaps = 70/528 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K+G V + FE ++ +SW A + G+ QNG EAL L+ ++ +GV P
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
SS+ +C + F G + +K GF + V N++ITL L+ G LA VF
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M RD V++ + +I+ + Q G+ E A +
Sbjct: 203 DMPHRDTVTF-------------------------------NTLISGHAQCGHGEHALEI 231
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M P+ S +L+A ASL L+ G +H+++ K GI D + +L+DLY K
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK 291
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ + ++F+S D +VV WN M+ +G + ND++ S
Sbjct: 292 CGDVETALVIFNS---SDRTNVVLWNLMLVAFG----------------QINDLAKS--- 329
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
F +F +M +G PN+ T+ +L ++ G+ +H +K GF
Sbjct: 330 ------------FELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D+++ L D Y+K G +E +RRV + + +K+ +SWT M+ G + K+++ F+EM
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+K I P+ + + S + C+ + +GL+ ++ + + + +V++ +R GR
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVNLYARCGR 496
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+ EA + + D W L+SG + + E A+K ++ +
Sbjct: 497 IREAFSSFEEIEHK-DEITWNGLVSG---FAQSGLHEEALKVFMRMDQ 540
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 206/437 (47%), Gaps = 40/437 (9%)
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A++V + K +V +++D++ + G + ARR+F+E+ R+ VSW M++ Y Q+G
Sbjct: 66 AKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEA L+RQM R P S VLS+ + G +HA K G ++F+ NA+
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
I LY +CG + VF + +D V++N++I G+ G E A E+F+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRD---TVTFNTLISGHAQCGHGEHALEIFE-------- 233
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
EM SG P+ T SS+L A AS+ L+KG LH +
Sbjct: 234 -----------------------EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYL 270
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
K G D + +L D Y K GD+E++ +F+ N + W +M+ + +S
Sbjct: 271 FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSF 330
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF +M+ I PN+ T +L C+ + +D G + +S+ + + ++DM
Sbjct: 331 ELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGVLIDM 389
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
S+ G L +A + M E D +W S+++G ++ + A A K + K P
Sbjct: 390 YSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-IWPDNI 447
Query: 658 VLLSNIYASAGRWIDAM 674
L S I AG I+AM
Sbjct: 448 GLASAISGCAG--INAM 462
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 204/489 (41%), Gaps = 128/489 (26%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+L+ T + G +H +KTG + Y++ L+ MY
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY------------------- 390
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++G LE+A+R+ + + E++ VSWT++I+G+++H
Sbjct: 391 ------------SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQH-------------- 424
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
C +AL F ++ + G+ P+ + +S CA IN R GL
Sbjct: 425 ---------ECCK--------DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ 467
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I+ +G+ VS+ N+L+ L + G + A S F+ +E +D ++W
Sbjct: 468 IHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW------------ 515
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ +++ + QSG EEA ++F +M + K N F LSA
Sbjct: 516 -------------------NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+L ++ G +HA V+K G + + NALI LY KCG +D ++ F + E++
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERN---E 613
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN++I +G+ EA +LFD M K
Sbjct: 614 VSWNTIITSCSQHGRGLEALDLFDQMKK-------------------------------E 642
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIES 504
G PN TF VL A + V +E+G + + G + D + ++G ++
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 505 SRRVFDRMP 513
+++ + MP
Sbjct: 703 AKKFIEEMP 711
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%), Gaps = 34/236 (14%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA + G+ K + N LIDLYSK
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSK---------------------------------- 89
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
NG + A+ +F+ + R++VSW A++SGY ++ + ++ +M +G +P SSV
Sbjct: 90 NGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSV 149
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L + +G+ +H + K GF ++F+G A+ Y + G + RVF MP ++
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+++ ++ G A+ G+ + ++ +FEEM+ + ++P+ +TI S+L AC+ G + KG +
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS-ASVASLEK 469
M +R S ++G+L H+ V ++F + F+ L A + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
++H K + G +G L D Y+K+G + +RRVF+ + ++ +SW M+ G A+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG- 588
+G +E++ L+ +M + + P + SVL +C+ + L +G I G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL----------IHAQGY 170
Query: 589 RHYTC--------VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+H C V+ + R G AE MP D+ + +L+SG
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG 218
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 228/797 (28%), Positives = 382/797 (47%), Gaps = 145/797 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK ++ GR +H H+I+ ++Y L+ MY+ EA ++ LN +
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTE 206
Query: 87 LVVH--NCMINANIQWGNLEEAQRLFDGMPERNEV--------------SWTALISG--- 127
VH N M+ +Q+G +EEA +L M + S +AL G
Sbjct: 207 RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266
Query: 128 ----------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
+ K G + E+ F++ ++V+SWT I G+ G S
Sbjct: 267 HVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHS 326
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
A ++F K+ + GV PN +T+ ++ A + + G +V I AG E ++V +L
Sbjct: 327 EIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTAL 386
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NE 281
+ + K G R VF+++ RD+++W ++ E G+ EA I+ +M N+
Sbjct: 387 VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNK 446
Query: 282 VSWSV-----------------------------------MIARYNQSGYPEEAFRLFRQ 306
+++ + +I+ Y + G ++A LF +
Sbjct: 447 ITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNK 506
Query: 307 MTR-------------------------------YSFKPNTSCFSIVLSALASLKALRSG 335
M R KPN ++ +L+A +S AL G
Sbjct: 507 MVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWG 566
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H V++ G+ D ++N L+++YS CG KD R VFD + ++D +V++N+MIGGY
Sbjct: 567 RRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRD---IVAYNAMIGGY 623
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+ +EA +LFD + + G P+K T+
Sbjct: 624 AAHNLGKEALKLFDRLQE-------------------------------EGLKPDKVTYI 652
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
++L A A+ SLE K++H ++K G+ D LG AL TYAK G + VFD+M +
Sbjct: 653 NMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKR 712
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
N ISW ++ G A+ G ++ + LFE M+ I P+ +T +S+L ACSH+GL+++G +YF
Sbjct: 713 NVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYF 772
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
SM + I P HY C+VD+L R+G+L E E I +MPF+ ++ W +LL C+ + N
Sbjct: 773 CSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGN 832
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+AERA ++ KL ++ A YV LS++YA+AG W A +RKLM ++G+ K G SW+E
Sbjct: 833 VPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIE 892
Query: 696 VRNQVHFFFQKTDHNPK 712
V +++H+F + +P+
Sbjct: 893 VGDKLHYFVAEDRSHPE 909
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 220/475 (46%), Gaps = 91/475 (19%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
A+ + L + G + N + + K C E+ D G V I + H +V
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQ-----HCTVL----- 174
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM--PERNEVSWS 285
D + +++++I+ G + EAR++++++ ER SW+
Sbjct: 175 ---------------------DQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWN 213
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
M+ Y Q GY EEA +L R+M ++ + +LS+ S AL G +H +K
Sbjct: 214 AMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKA 273
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
+ DV ++N ++++Y+KCG + EA+
Sbjct: 274 RLLFDVNVANCILNMYAKCGS----------------------------------IHEAR 299
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
E+FD M ++ VSW+ II GY + ++ F +F +M G +PN+ T+ +VL A + A
Sbjct: 300 EVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+L+ GK +H I+ G D+ +GTAL YAK G + R+VF+++ +++ I+W M+
Sbjct: 360 ALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 419
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGLVDKGLKY 574
GLAE G +E+ ++ +M++ + PN++T + +L AC HS +V G +
Sbjct: 420 GLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMF 479
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
S++ ++ M +R G + +A N M D +W +++ G
Sbjct: 480 DISVQ------------NALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGG 521
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 158/338 (46%), Gaps = 46/338 (13%)
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+ A + + + + + N+ + +L +K L +G VH H+++ D + NAL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
I++Y +CG ++ R V++ + + V SWN+M+ GY G +EEA +L
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERT-VHSWNAMVVGYVQYGYIEEALKL---------- 231
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
EM G ++T +L + S ++LE G+++H +
Sbjct: 232 ---------------------LREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEA 270
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+K +DV + + + YAK G I +R VFD+M K+ +SWT+++ G A+ G+++ +
Sbjct: 271 MKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAF 330
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY------ 591
+F++M++ + PN +T ++VL A S + G + +++ N H
Sbjct: 331 EIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG-------KTVHSHILNAGHESDLAVG 383
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T +V M ++ G + + D AW +++ G
Sbjct: 384 TALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGG 420
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 219/672 (32%), Positives = 341/672 (50%), Gaps = 94/672 (13%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
+ +H H+IKTG+H + ++L+ SR
Sbjct: 46 KQIHAHIIKTGLHNTLFALSKLIEFSAVSRS----------------------------- 76
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G++ A LF+ + E N W ++I G +S + A+
Sbjct: 77 GDISYAISLFNSIEEPNLFIWNSMIRGL--------------------SMSLSPAL---- 112
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
AL F++++ SGV+PN TF + K+CA++ G + + K GF V
Sbjct: 113 -------ALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ SLI + + GE++ A+ VFD+ RD +S+T ++ + G + AR++FDEMP ++
Sbjct: 166 IHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKD 225
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MIA Y Q G +EA LF M + + PN S VLSA A AL G + +
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G+ ++ + NALID+YSKCG+
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGD---------------------------------- 311
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
++ A+ELFD+M +R+ +SW+ +I GY + A+F EML SG P + TF S+L +
Sbjct: 312 LQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPS 371
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
A + +++ GK +H I K L T+L D YAK G+I ++R+VFD M K+ SW
Sbjct: 372 CAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASW 431
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ GLA G A ++ LF +M I PNE+T + +L AC H+GLVD G ++F+SM
Sbjct: 432 NAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ 491
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
Y I P +HY C++D+L R+G EAE + +M +PD W SLL C+ + ++ E
Sbjct: 492 DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGE 551
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
+ L++L ++P YVLLSNIYA AG+W D +R + ++G++K GC+ +EV N V
Sbjct: 552 LVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVV 611
Query: 701 HFFFQKTDHNPK 712
H F +P+
Sbjct: 612 HEFLVGDKVHPQ 623
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 198/439 (45%), Gaps = 71/439 (16%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T LLK +G+ +H H++K G + ++ T L+ MY S + A
Sbjct: 128 NSY--TFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQL 185
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+ N D + +I WG ++ A++LFD MP ++ VSW A+I+G+ + GR
Sbjct: 186 VFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGR---- 241
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
S EAL LF + ++ V PNE T S+ ACA+
Sbjct: 242 ---------------------------SKEALLLFEDMRKANVPPNESTIVSVLSACAQS 274
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
N LG S+ I G ++ + N+LI + K G++ AR +FD M +RDV+SW V+
Sbjct: 275 NALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVM- 333
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
I Y +EA LFR+M +P
Sbjct: 334 ------------------------------IGGYTHMCSYKEALALFREMLASGVEPTEI 363
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
F +L + A L A+ G +HA++ K +S +LIDLY+KCG R VFD +
Sbjct: 364 TFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGM 423
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFD 433
K +A SWN+MI G ++GQ ++A ELF M + N++++ I+S D
Sbjct: 424 KIKSLA---SWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480
Query: 434 LVFAVFNEMLLSGEIPNKS 452
L F+ M+ +I KS
Sbjct: 481 LGQQFFSSMVQDYKISPKS 499
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 165/343 (48%), Gaps = 75/343 (21%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL--YSKCGETKDGRLVFDSIVEK 380
L L+ +++R+ +HAH++K G+ +F + LI+ S+ G+ +F+SI E
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ + WNSMI G + S S ++ LVF F
Sbjct: 93 N---LFIWNSMIRGLSM--------------------SLSPALA---------LVF--FV 118
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M+ SG PN TF +L + A +AS +GK +H ++KLGF DVF+ T+L + YA+SG
Sbjct: 119 RMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSG 178
Query: 501 D-------------------------------IESSRRVFDRMPDKNEISWTVMVRGLAE 529
+ ++ +R++FD MP K+ +SW M+ G A+
Sbjct: 179 EMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQ 238
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY---NIKP 586
G +KE++ LFE+M K ++ PNE TI+SVL AC+ S +D G NSM +
Sbjct: 239 MGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLG----NSMRSWIEDRGLCS 294
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
N + ++DM S+ G L A + + M E D +W ++ G
Sbjct: 295 NLKLVNALIDMYSKCGDLQTARELFDDM-LERDVISWNVMIGG 336
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 219/717 (30%), Positives = 345/717 (48%), Gaps = 104/717 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L QGR +H K G E ++ ++ +YL A + D+ D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PERNEVSWT------------------ 122
V N +I+ + Q G+ E A +F+ M P+ +S
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 123 ---------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
+L+ ++K G VE ++ F + NV+ W + F Q +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ +LF ++ +G++PN+ T+ I + C + LG + L K GFE + V LI
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K G ++ AR V + ++++DVVSWT M
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWT-------------------------------SM 417
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q ++A F++M + P+ + +S A + A+R G+ +HA + G
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV I NAL++LY++CG ++ F+ I KD ++WN ++ G+ +G EEA
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKD---EITWNGLVSGFAQSGLHEEA--- 531
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
VF M SG N TF S L ASA++A +
Sbjct: 532 ----------------------------LKVFMRMDQSGVKHNVFTFVSALSASANLAEI 563
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +H ++IK G ++ +G AL Y K G E ++ F M ++NE+SW ++
Sbjct: 564 KQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSC 623
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ G E+++LF++M+K I PN++T + VL ACSH GLV++GL YF SM Y I+P
Sbjct: 624 SQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPR 683
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CV+D+ R+G+L A+ FI MP D+ W +LLS CK +KN ++ E A K+L
Sbjct: 684 PDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLL 743
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+L A YVLLSN YA +W + VRK+M ++G+RK G SW+EV+N VH FF
Sbjct: 744 ELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFF 800
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 138/528 (26%), Positives = 246/528 (46%), Gaps = 70/528 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K+G V + FE ++ +SW A + G+ QNG EAL L+ ++ +GV P
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
SS+ +C + F G + +K GF + V N++ITL L+ G LA VF
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M RD V++ + +I+ + Q G+ E A +
Sbjct: 203 DMPHRDTVTF-------------------------------NTLISGHAQCGHGEHALEI 231
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M P+ S +L+A ASL L+ G +H+++ K GI D + +L+DLY K
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK 291
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ + ++F+S D +VV WN M+ +G + ND++ S
Sbjct: 292 CGDVETALVIFNS---SDRTNVVLWNLMLVAFG----------------QINDLAKS--- 329
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
F +F +M +G PN+ T+ +L ++ G+ +H +K GF
Sbjct: 330 ------------FELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D+++ L D Y+K G +E +RRV + + +K+ +SWT M+ G + K+++ F+EM
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+K I P+ + + S + C+ + +GL+ ++ + + + +V++ +R GR
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGDVSIWNALVNLYARCGR 496
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+ EA + + D W L+SG + + E A+K ++ +
Sbjct: 497 IREAFSSFEEIEHK-DEITWNGLVSG---FAQSGLHEEALKVFMRMDQ 540
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 206/437 (47%), Gaps = 40/437 (9%)
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A++V + K +V +++D++ + G + ARR+F+E+ R+ VSW M++ Y Q+G
Sbjct: 66 AKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEA L+RQM R P S VLS+ + G +HA K G ++F+ NA+
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
I LY +CG + VF + +D V++N++I G+ G E A E+F+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRD---TVTFNTLISGHAQCGHGEHALEIFE-------- 233
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
EM SG P+ T SS+L A AS+ L+KG LH +
Sbjct: 234 -----------------------EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYL 270
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
K G D + +L D Y K GD+E++ +F+ N + W +M+ + +S
Sbjct: 271 FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSF 330
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF +M+ I PN+ T +L C+ + +D G + +S+ + + ++DM
Sbjct: 331 ELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGVLIDM 389
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
S+ G L +A + M E D +W S+++G ++ + A A K + K P
Sbjct: 390 YSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-IWPDNI 447
Query: 658 VLLSNIYASAGRWIDAM 674
L S I AG I+AM
Sbjct: 448 GLASAISGCAG--INAM 462
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 204/489 (41%), Gaps = 128/489 (26%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+L+ T + G +H +KTG + Y++ L+ MY
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY------------------- 390
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++G LE+A+R+ + + E++ VSWT++I+G+++H
Sbjct: 391 ------------SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQH-------------- 424
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
C +AL F ++ + G+ P+ + +S CA IN R GL
Sbjct: 425 ---------ECCK--------DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ 467
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I+ +G+ VS+ N+L+ L + G + A S F+ +E +D ++W
Sbjct: 468 IHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW------------ 515
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ +++ + QSG EEA ++F +M + K N F LSA
Sbjct: 516 -------------------NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+L ++ G +HA V+K G + + NALI LY KCG +D ++ F + E++
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERN---E 613
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN++I +G+ EA +LFD M K
Sbjct: 614 VSWNTIITSCSQHGRGLEALDLFDQMKK-------------------------------E 642
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIES 504
G PN TF VL A + V +E+G + + G + D + ++G ++
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 505 SRRVFDRMP 513
+++ + MP
Sbjct: 703 AKKFIEEMP 711
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%), Gaps = 34/236 (14%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA + G+ K + N LIDLYSK
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSK---------------------------------- 89
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
NG + A+ +F+ + R++VSW A++SGY ++ + ++ +M +G +P SSV
Sbjct: 90 NGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSV 149
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L + +G+ +H + K GF ++F+G A+ Y + G + RVF MP ++
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+++ ++ G A+ G+ + ++ +FEEM+ + ++P+ +TI S+L AC+ G + KG +
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS-ASVASLEK 469
M +R S ++G+L H+ V ++F + F+ L A + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
++H K + G +G L D Y+K+G + +RRVF+ + ++ +SW M+ G A+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG- 588
+G +E++ L+ +M + + P + SVL +C+ + L +G I G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL----------IHAQGY 170
Query: 589 RHYTC--------VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+H C V+ + R G AE MP D+ + +L+SG
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG 218
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 331/605 (54%), Gaps = 67/605 (11%)
Query: 109 LFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
L G ERN V +L++ ++K+ RV+ + F+ ++VISW + I G+V NG + +
Sbjct: 222 LKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L +F+++L SG++ + T S+ CA+ LG +V + KA F + CN+L
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL--- 337
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
LD++ + GDL A+ +F EM +R+ VS++ MI
Sbjct: 338 ----------------------------LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 369
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
A Y + G EA +LF +M P+ + VL+ A + L G VH + + +
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D+F+SNAL+D+Y+KC G M+EA+ +F
Sbjct: 430 FDIFVSNALMDMYAKC----------------------------------GSMQEAELVF 455
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASL 467
M ++ +SW+ II GY ++ + ++FN +L P++ T + VL A AS+++
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+KG+++HG I++ G+ D + +L D YAK G + + +FD + K+ +SWTVM+ G
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
G+ KE+I LF +M + I +E++ +S+L+ACSHSGLVD+G ++FN M I+P
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C+VDML+R+G L +A FI +MP PD+ W +LL GC+ + + ++AE+ + ++
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 695
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L E+ YVL++NIYA A +W +RK + ++GLRK+ GCSW+E++ +V+ F
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Query: 708 DHNPK 712
NP+
Sbjct: 756 SSNPE 760
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 187/388 (48%), Gaps = 48/388 (12%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
++ GDL EA R+FDE+ + W++++ +SG + LF++M + ++
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
FS V + +SL+++ G +H +LK G + + N+L+ Y K R VFD +
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
E+D V+SWNS+I GY NG E+ +V
Sbjct: 258 ERD---VISWNSIINGYVSNGLAEKG-------------------------------LSV 283
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F +ML+SG + +T SV A + G+ +H +K F + L D Y+K
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
GD++S++ VF M D++ +S+T M+ G A G A E++ LFEEME+ I+P+ T+ +V
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-----TCVVDMLSRSGRLSEAEDFINS 613
L C+ L+D+G + IK N + ++DM ++ G + EAE +
Sbjct: 404 LNCCARYRLLDEGKRVHEW------IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 614 MPFEPDSNAWASLLSGC--KTYKNEQIA 639
M + D +W +++ G Y NE ++
Sbjct: 458 MRVK-DIISWNTIIGGYSKNCYANEALS 484
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 171/375 (45%), Gaps = 41/375 (10%)
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+R+ + + R+ +SG E A +L ++ P T C VL A K+L+ G
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCS--VLQLCADSKSLKDGKE 115
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
V + G D + + L +Y+ CG+ K+ VFD E + + WN
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD---EVKIEKALFWNI------- 165
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
L + + K D S S +F +M+ SG + TFS V
Sbjct: 166 ---------LMNELAKSGDFSGS---------------IGLFKKMMSSGVEMDSYTFSCV 201
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
+ +S+ S+ G+ LHG I+K GF +G +L Y K+ ++S+R+VFD M +++
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
ISW ++ G +G A++ +++F +M + I + TI+SV C+ S L+ G + +S
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-RAVHS 320
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
+ R ++DM S+ G L A+ M + ++ S+++G Y E
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAG---YAREG 376
Query: 638 IAERAVKNLWKLAEE 652
+A AVK ++ EE
Sbjct: 377 LAGEAVKLFEEMEEE 391
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 46/284 (16%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GFD+ V N +++ + G+++EA+ +F M ++ +SW +I G+ K
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK------------- 475
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRL 202
N ++ EAL LF LLE P+E T + + ACA ++ F
Sbjct: 476 ------------------NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + G I + G+ V NSL+ + K G + LA +FD + +D+VSWTV++ +
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 263 MGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK--PNT 316
G EA +F++M E +E+S+ ++ + SG +E +R F M R+ K P
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM-RHECKIEPTV 636
Query: 317 SCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALI 358
++ ++ LA R+G + A+ + + I D I AL+
Sbjct: 637 EHYACIVDMLA-----RTGDLIKAYRFIENMPIPPDATIWGALL 675
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 127/324 (39%), Gaps = 80/324 (24%)
Query: 7 SLFSIN-PETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
SLF++ E F+ T C+L S + +GR +HG++++ G +R++ L+ M
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + G L A LFD + ++ VSWT +I
Sbjct: 544 Y-------------------------------AKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
+G+ H GF EA+ LF ++ ++G++ +E+
Sbjct: 573 AGYGMH-------------------------------GFGKEAIALFNQMRQAGIEADEI 601
Query: 186 TFSSICKACAEINDFRLGLSVFGLI-FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
+F S+ AC+ G F ++ + E V ++ + + G++ A +
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 245 ME-KRDVVSWTVIL-------DVFIEMGDLGE--ARRIFDEMPERNEVSWSVMIARYNQS 294
M D W +L DV L E A ++F+ PE N + +M Y ++
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDV-----KLAEKVAEKVFELEPE-NTGYYVLMANIYAEA 715
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSC 318
E+ RL +++ + + N C
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGC 739
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 221/702 (31%), Positives = 357/702 (50%), Gaps = 110/702 (15%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+V +N F V +++ + G L++A+++FDGM ERN +W+A+I + + R
Sbjct: 108 LVHRVNPF---VETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQR---- 160
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
W E ++LF ++ GV P+ F I +AC
Sbjct: 161 --------------WK-------------EVVELFFLMMGDGVLPDAFLFPKILQACGNC 193
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
D + L+ + G ++ + NS++T +K G++ LAR F M++RD VSW V++
Sbjct: 194 EDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMI 253
Query: 258 DVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQ-------------------- 293
+ + G+ EARR+ D M + V++++MIA Y+Q
Sbjct: 254 AGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLA 313
Query: 294 ----------SGYPE-----EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
SG+ + +A F++M +PNT + SA ASLK+L++G+ +
Sbjct: 314 PDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEI 373
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV---------------- 382
H +K+GI ++ + N+LID+YSKCG+ + R VFD+I+EKDV
Sbjct: 374 HCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYG 433
Query: 383 ----------------AHVVSWNSMIGGYGLNGQMEEAKELF-----DNMPKRNDVSWSA 421
+VV+WN+MI G NG ++A +LF D KRN SW++
Sbjct: 434 GKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNS 493
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY + + + A+F +M PN T S+L A A+V + +K K++HG +++
Sbjct: 494 LIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRN 553
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++ + +L DTYAKSG+I+ SR VF+ M K+ I+W ++ G G + + LF+
Sbjct: 554 LESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFD 613
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M I PN T+ S++ A +G+VDKG F+S+ + I P HY +VD+ RS
Sbjct: 614 QMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRS 673
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL++A +FI MP EPD + W SLL+ C+ + N +A A K L +L ++ Y LL
Sbjct: 674 GRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLV 733
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA G++ + VRKL E ++K WVEVRN+VH F
Sbjct: 734 QAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLF 775
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 235/529 (44%), Gaps = 85/529 (16%)
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS- 220
NG EA+ + + G K + T+ ++ + C ++ LG L + G V+
Sbjct: 58 NGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRE---LHVRMGLVHRVNP 114
Query: 221 -VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V L+++ K G + AR VFD M++R
Sbjct: 115 FVETKLVSMYAKCGCLKDARKVFDGMQER------------------------------- 143
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N +WS MI Y++ +E LF M P+ F +L A + + L + +H
Sbjct: 144 NLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIH 203
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ V++ G+ + +SN+++ + KCG+ R F ++ E+D VSWN MI GY G
Sbjct: 204 SLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERD---GVSWNVMIAGYCQKG 260
Query: 400 QMEEAKELFDNMPKRN--------------------------------------DV-SWS 420
+EA+ L D M + DV +W+
Sbjct: 261 NGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWT 320
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
++ISG+ + + F +M+L+G PN T +S A AS+ SL+ G ++H IK+
Sbjct: 321 SMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKM 380
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G + +G +L D Y+K G +E++R VFD + +K+ +W M+ G ++GY ++ LF
Sbjct: 381 GIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELF 440
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ ++++ PN +T +++ C +G D+ + F ME +K N + ++ +
Sbjct: 441 MRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQ 500
Query: 601 SGRLSEAEDF---INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
G ++A + S+ F P+S S+L C +AE+ +K +
Sbjct: 501 LGEKNKALAIFRQMQSLNFSPNSVTILSILPACANV----MAEKKIKEI 545
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 217/637 (34%), Positives = 351/637 (55%), Gaps = 35/637 (5%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
EA + ++ + V N M+ A Q G +E+A+ LFD MP RNE SWT ++S +++ G
Sbjct: 60 EARRLFDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGE 119
Query: 134 VEESMWYFERNPFQNVIS-WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
+ + +R P + + + I G+ +NG +A + LL+ P+ V+++S+
Sbjct: 120 LTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDA----IALLQEMPAPDIVSWNSVLG 175
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
I + + SV F +K + N ++ ++ G++D+A + F R+ +V+S
Sbjct: 176 GL--IRNEEISRSV--QFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVIS 231
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W +++ + + G +GEAR +FD MPERN V+W+V+++ Y Q E A+ LF +M +
Sbjct: 232 WVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNS 291
Query: 313 KPNTSCFS------------IVLSALASLKA----------LRSGMHVHAHVLKIGI-EK 349
T+ S VLS + S L+S + A L GI +
Sbjct: 292 ISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVR 351
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D N +I Y +CG + ++F + KD ++SWN+MI G GQ+ +A +F
Sbjct: 352 DAVCWNTMISGYVQCGMLDEAMVLFQQMPNKD---MISWNTMIAGCAQGGQIRKAASIFR 408
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M +RN VSW++IISG++++ F F M + + T++ L ASA++A+L+
Sbjct: 409 KMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQI 468
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
G+ H +++ GF D G AL YAK G + +R+VFD M ++ +SW ++ G A
Sbjct: 469 GRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYAS 528
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
+G E I +F EME S+ P+E+T++ VL ACSH+GL+D+GL +FNSM +Y++KP
Sbjct: 529 NGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAE 588
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
HYTC+VD+L R+GRL EA + + M +P++ W +LL C+ +KN +IA A + L++L
Sbjct: 589 HYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFEL 648
Query: 650 AEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
+ YVLLSNI AG+W DA VR LM E LR
Sbjct: 649 EPCKASNYVLLSNICVEAGKWDDADKVRVLMKESILR 685
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 257/564 (45%), Gaps = 86/564 (15%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
++ + G++ + FE P +NV+S+ A + +G EA +LF ++ + N
Sbjct: 18 LTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEM----PRRNP 73
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
V+++++ AC++ G V+ AR +FD
Sbjct: 74 VSWNTMMVACSQ-----------------------------------HGRVEDARGLFDA 98
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEEAFRL 303
M R+ SWT+++ ++ G+L AR + D MP E+ ++ MI+ Y ++G E+A L
Sbjct: 99 MPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIAL 158
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
++M P+ ++ VL L + + + + +KD+ N +++ Y +
Sbjct: 159 LQEMP----APDIVSWNSVLGGLIRNEEISRSVQFFDEM----PDKDLVSWNLMLEGYVR 210
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G+ F I + V+SW +++ GY G+M EA+ELFD MP+RN V+W+ ++
Sbjct: 211 AGDLDVASAFFSRIPSPN---VISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLL 267
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS--LEKGKDLHGKIIKLG 481
SGY++ Q + + +F EM P K++ S S V S L++ KD+ K+
Sbjct: 268 SGYVQFSQVEAAYNLFIEM------PEKNSISWTTMVSGFVRSGKLQEAKDVLSKM---- 317
Query: 482 FPYD-VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
P D V TAL Y KS I+ +R++FD + ++ + W M+ G + G E++ LF
Sbjct: 318 -PSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLF 376
Query: 541 EEMEKTSITPNELTIL--SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
++M PN+ I +++ C+ G + K F M+ + N + ++
Sbjct: 377 QQM------PNKDMISWNTMIAGCAQGGQIRKAASIFRKMK-----RRNTVSWNSIISGF 425
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAW---ASLLSGCKTYKNEQIAERAVKNLWK---LAEE 652
++G EA M + S W A LS QI + L + +++
Sbjct: 426 VQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDS 485
Query: 653 HPAGYVLLSNIYASAGRWIDAMNV 676
P G L+S YA GR ++A V
Sbjct: 486 SP-GNALIS-AYAKCGRMLEARQV 507
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 210/458 (45%), Gaps = 79/458 (17%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLT------TRLLIMYLGSRKSLEANEIVKDL 82
KD+ S NL+++G G L R + L+ Y + + EA E+ +
Sbjct: 196 KDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRM 255
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++V N +++ +Q+ +E A LF MPE+N +SWT ++SGF++ G+++E+
Sbjct: 256 PERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLS 315
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P NV + TA + G++++ +A +LF G+ V ++C
Sbjct: 316 KMPSDNVGAKTALMHGYLKSNLIDDARQLF-----DGI----VVRDAVC----------- 355
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
N++I+ ++ G +D A +F +M +D++SW ++ +
Sbjct: 356 -------------------WNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQ 396
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + +A IF +M RN VSW+ +I+ + Q+G EA + F M R + + ++
Sbjct: 397 GGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACC 456
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LSA A+L L+ G H+ +++ G D NALI Y+KCG + R VFD +V +D
Sbjct: 457 LSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQD- 515
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+VSWN++I GY NG E V AVF EM
Sbjct: 516 --IVSWNALIDGYASNGNGSE-------------------------------VIAVFREM 542
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+ P++ T VL A + +++G +IKL
Sbjct: 543 EANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKL 580
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 149/304 (49%), Gaps = 8/304 (2%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T L+ YL S +A ++ + D V N MI+ +Q G L+EA LF MP ++ +
Sbjct: 326 TALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMI 385
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +I+G + G++ ++ F + +N +SW + I GFVQNG EAL+ F+ +
Sbjct: 386 SWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDA 445
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ T++ A A + ++G L+ + GF S N+LI+ K G + AR
Sbjct: 446 KSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEAR 505
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSG 295
VFD M +D+VSW ++D + G+ E +F EM +E++ V+++ + +G
Sbjct: 506 QVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAG 565
Query: 296 YPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
+E F M + YS KP ++ ++ L LR + V + I+ + +
Sbjct: 566 LIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFEL---VQGMQIQPNAGVW 622
Query: 355 NALI 358
AL+
Sbjct: 623 GALL 626
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
VF + A+SG + ++RR+F+ MP +N +S+ MV LA G E+ LF+EM +
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
N ++ +++ ACS G V+ F++M N +T +V R+G L+
Sbjct: 71 R----NPVSWNTMMVACSQHGRVEDARGLFDAMPA-----RNEYSWTIMVSCYVRAGELT 121
Query: 606 EAEDFINSMPFEPDSNAWASLLSG 629
A + ++ MP E + + +++SG
Sbjct: 122 LARELLDRMPGEKCAACYNTMISG 145
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 224/674 (33%), Positives = 353/674 (52%), Gaps = 75/674 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +HG +K G + + LL MY K N+ DL G L + M A +
Sbjct: 177 GIQIHGLAVKMGFDCDVVTGSALLDMY---AKCCVQND---DLRG-GLELFKEMQKAGV- 228
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE-SMWYFERNPFQNVISWTAAICG 158
G L+ + V TA + +MK + + S F P N+ S+ A I G
Sbjct: 229 -GALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVG 287
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+ ++ EAL +F L +SG+ +EV+ S +ACA I GL V GL K+ + +
Sbjct: 288 YARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSN 347
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ V N+ ILD++ + G L EA +F+EM
Sbjct: 348 ICVANA-------------------------------ILDMYGKCGALVEACLVFEEMVS 376
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
R+ VSW+ +IA + Q+G E+ LF M + +P+ + VL A A +AL GM +
Sbjct: 377 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEI 436
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H ++K + D F+ ALID+YSKCG
Sbjct: 437 HNRIIKSRMGLDSFVGIALIDMYSKCG--------------------------------- 463
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
ME+A++L D + ++ VSW+AIISG+ KQ + F++ML G P+ T++++L
Sbjct: 464 -MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 522
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A++ ++E GK +H +IIK D ++ + L D Y+K G+++ + +F++ P+++ +
Sbjct: 523 DTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 582
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
+W MV G A+ G +E++ +FE M+ ++ PN T L+VL AC H GLV+KGL YF+SM
Sbjct: 583 TWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSM 642
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
Y + P HY+CVVD++ RSG++S+A + I MPFE D+ W +LLS CK + N ++
Sbjct: 643 LSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEV 702
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
AE+A ++ +L E A YVLLSNIYA+AG W + +RK+M GL+K GCSW+E+++
Sbjct: 703 AEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKS 762
Query: 699 QVHFFFQKTDHNPK 712
+VH F +P+
Sbjct: 763 EVHAFLVGDKAHPR 776
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/579 (25%), Positives = 267/579 (46%), Gaps = 78/579 (13%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC+I I+ +L A ++FDGMP+R+ VSW A++ G+ G + + F+ P
Sbjct: 79 VTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP--- 135
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
CG V+ F F ++ G + TF+ + K+C+ + D G+ + G
Sbjct: 136 -----GTGCGVVEL-FDFRMGRM-------GTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 182
Query: 209 LIFKAGFEKHVSVCNSLITLSLKM----GEVDLARSVFDRMEK----------------- 247
L K GF+ V ++L+ + K ++ +F M+K
Sbjct: 183 LAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDF 242
Query: 248 -RDVVSWTVILDVFIEMGDLGE-ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
DVV T LD++++ +L + + ++F+ +P N S++ +I Y +S EA +FR
Sbjct: 243 GTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFR 302
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
+ + + S A A +K G+ VH +K + ++ ++NA++D+Y KCG
Sbjct: 303 LLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCG 362
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ LVF+ +V +D VSWN++I + NG E+ LF W
Sbjct: 363 ALVEACLVFEEMVSRD---AVSWNAIIAAHEQNGNEEKTLSLF---------VW------ 404
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
ML SG P++ T+ SVL A A +L G ++H +IIK D
Sbjct: 405 ----------------MLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLD 448
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
F+G AL D Y+K G +E + ++ DR+ ++ +SW ++ G + ++E+ F +M +
Sbjct: 449 SFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLE 508
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P+ T ++L C++ V+ G K ++ ++ + + +VDM S+ G +
Sbjct: 509 MGVDPDNFTYATILDTCANLVTVELG-KQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQ 567
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + P D W +++ G Y + E A+K
Sbjct: 568 DFQLIFEKAP-NRDFVTWNAMVCG---YAQHGLGEEALK 602
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 229/485 (47%), Gaps = 38/485 (7%)
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
TFS I + C++ G + F+ V V N LI + +K ++ A VFD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
+RD VSW +L + GD+G A+++FD MP + ++ ++ FR+ R
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPG----TGCGVVELFD--------FRMGR 151
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
T + + + F++VL + +SL+ G+ +H +K+G + DV +AL+D+Y+KC
Sbjct: 152 MGTVF----DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCC 207
Query: 366 ETKD----GRLVFDSIVEKDVAHV----------VSWNSMIGGYGLNGQM------EEAK 405
D G +F + + V + + +IG L+ M + +
Sbjct: 208 VQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSN 267
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
+LF+++P N S++AII GY + +F + SG ++ + S A A +
Sbjct: 268 QLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIK 327
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+G +HG +K ++ + A+ D Y K G + + VF+ M ++ +SW ++
Sbjct: 328 GDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIA 387
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
++G +++++LF M ++ + P+E T SVL AC+ ++ G++ N + +
Sbjct: 388 AHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIK-SRMG 446
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
+ ++DM S+ G + +AE + + E +W +++SG K + A++
Sbjct: 447 LDSFVGIALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSK 505
Query: 646 LWKLA 650
+ ++
Sbjct: 506 MLEMG 510
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 124/315 (39%), Gaps = 77/315 (24%)
Query: 11 INPET-SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
++P+ ++ + ++TC L+ V G+ +H +IK + + Y+++ L+ MY
Sbjct: 511 VDPDNFTYATILDTCANLVT-------VELGKQIHAQIIKKELQSDAYISSTLVDMY--- 560
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+ GN+++ Q +F+ P R+ V+W A++ G+
Sbjct: 561 ----------------------------SKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYA 592
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+HG EE++ FE +N VKPN TF +
Sbjct: 593 QHGLGEEALKIFEYMQLEN-------------------------------VKPNHATFLA 621
Query: 190 ICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-K 247
+ +AC + GL F ++ G + + + ++ + + G+V A + + M +
Sbjct: 622 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE 681
Query: 248 RDVVSWTVILDVFIEMGDLGEARR----IFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
D V W +L G++ A + I PE + ++ ++ Y +G E +L
Sbjct: 682 ADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPE-DSAAYVLLSNIYANAGMWNEVTKL 740
Query: 304 FRQMTRYSFKPNTSC 318
+ M K C
Sbjct: 741 RKMMRFNGLKKEPGC 755
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K TFS + + +L GK H ++I F VF+ L Y K D+ + +VFD
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFD 101
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
MP ++ +SW M+ G A G + LF+ M T EL
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVEL 144
>gi|357518009|ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523315|gb|AET03769.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 672
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 217/665 (32%), Positives = 357/665 (53%), Gaps = 13/665 (1%)
Query: 39 QGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSL-EANEIVKDLNGFDLVVHNCMINA 96
+ R LH L+KTG +H T RLL +Y R SL +A+++ ++ + N +I A
Sbjct: 12 EARQLHLSLLKTGNLHSSVITTNRLLQLY-SRRGSLHDASKLFDEMPQPNPFSWNTLIEA 70
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+I G+ ++ LF MP + SW ++S K G ++++ F P +N + W + I
Sbjct: 71 HINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMI 130
Query: 157 CGFVQNGFSFEALKLF----LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
G+ ++G+ +L LF L LE+ V + S++ ACA++ G V +F
Sbjct: 131 HGYSRHGYPRNSLLLFKEMNLDPLET-VHRDAFVLSTVFGACADLFALDCGKQVHARVFI 189
Query: 213 AGFE--KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
GFE + +C+S++ K G++D A V +++ D S + ++ + G + +AR
Sbjct: 190 DGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDAR 249
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
++FD + V W+ +I+ Y +G EA LF +M R + S + +LS +SL
Sbjct: 250 KVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLL 309
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+ +H H KIG D+ +++ L+D YSKC D +F E V + N+
Sbjct: 310 NVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFH---ELKVYDAILLNT 366
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
MI Y G++E+AKE+F++MP + +SW++I+ G ++ F+ M +
Sbjct: 367 MITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMD 426
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K +F+SV+ A A +SLE G+ L GK I LG D + T+L D Y K G +E R+VFD
Sbjct: 427 KFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFD 486
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
M +E+SW M+ G A +GY E++ LF EM + + P+ +T +L AC H GLV++
Sbjct: 487 GMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEE 546
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G F +M+ Y+I P HY+C+VD+ +R G EA I MPF+ D+N W S+L GC
Sbjct: 547 GRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGC 606
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
++ N+ I + A + + +L + Y+ LSNI A++ W + VR+LM K ++K G
Sbjct: 607 VSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDWEGSAEVRELMRNKNVQKIPG 666
Query: 691 CSWVE 695
CSW++
Sbjct: 667 CSWMD 671
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 338/630 (53%), Gaps = 83/630 (13%)
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A + ++ +V N M+ Q EA+ LFD MPERN VSW LISG++K+ V
Sbjct: 35 ARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMV 94
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
E+ F+ P +NV+SWTA + G+VQ G EA LF ++ E V V+++ +
Sbjct: 95 SEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV----VSWTVM---- 146
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
LG GLI ++ +D AR +FD M +DVV+ T
Sbjct: 147 -------LG----GLI--------------------QVRRIDEARGLFDIMPVKDVVART 175
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++ + + G L EAR +FDEMP RN +SW+ MI+ Y Q+G + A +LF M
Sbjct: 176 NMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP------ 229
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
EK+ A++ Y++ G ++ +F
Sbjct: 230 ---------------------------------EKNEVSWTAMLMGYTQGGRIEEASELF 256
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D++ V VV+ N+MI G+G NG++ +A+++FD + +++D +WSA+I Y E K F++
Sbjct: 257 DAM---PVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVY-ERKGFEV 312
Query: 435 -VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+F M G N + SVL AS+ASL+ G+ +H +++K F DVF+ + L
Sbjct: 313 EALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLI 372
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
Y K GD+ +R++FDR K+ + W ++ G A+ G +E++ +F EM + + + +
Sbjct: 373 TMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGV 432
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T + VL ACS++G V +GL+ F SM+ Y ++P HY C+VD+L R+G +++A D I
Sbjct: 433 TFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQK 492
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP E D+ W +LL C+T+ N +AE A K L +L ++ Y+LLSNIYAS GRW D
Sbjct: 493 MPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDV 552
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+R+ M K + KS GCSW+EV +VH F
Sbjct: 553 AELRRNMRVKKVSKSPGCSWIEVEKRVHMF 582
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 191/379 (50%), Gaps = 46/379 (12%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + + EA + + + V N +I+ ++ + EA++ FD MPERN VSWTA++
Sbjct: 57 YFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMV 116
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G+++ G V E+ F + P +NV+SWT + G +Q EA LF + V
Sbjct: 117 RGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTN 176
Query: 186 TFSSICKA--CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
S C+ AE + +F ++V ++I+ ++ G+VD+AR +F+
Sbjct: 177 MISGYCQEGRLAEARE----------LFDEMPRRNVISWTTMISGYVQNGQVDVARKLFE 226
Query: 244 RMEKRDVVSWTVIL-------------DVFIEM------------------GDLGEARRI 272
M +++ VSWT +L ++F M G++ +AR++
Sbjct: 227 VMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQV 286
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
FD++ E+++ +WS MI Y + G+ EA LF M R + N VLS ASL +L
Sbjct: 287 FDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASL 346
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G VHA ++K + DVF+++ LI +Y KCG+ R +FD KD +V WNS+I
Sbjct: 347 DHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKD---IVMWNSII 403
Query: 393 GGYGLNGQMEEAKELFDNM 411
GY +G +EEA ++F M
Sbjct: 404 TGYAQHGLVEEALQVFHEM 422
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 230/504 (45%), Gaps = 81/504 (16%)
Query: 88 VVHNCMINANIQWGNLEEAQRL-------------------------------FDGMPER 116
+ +N I + G +E A+R+ FD MPER
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N VSW LISG++K+ V E+ F+ P +NV+SWTA + G+VQ G EA LF ++
Sbjct: 77 NTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP 136
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
E N V+++ + ++ +F ++ K V ++I+ + G +
Sbjct: 137 EK----NVVSWTVMLGGLIQVRRIDEARGLFDIMPV----KDVVARTNMISGYCQEGRLA 188
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
AR +FD M +R+V+SWT ++ +++ G + AR++F+ MPE+NEVSW+ M+ Y Q G
Sbjct: 189 EARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGR 248
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVL-----SALASLKAL------------------- 332
EEA LF M K +C +++L +A + +
Sbjct: 249 IEEASELFDAM---PVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVY 305
Query: 333 -RSGMHVHAHVLKIGIEKDVFISN--ALIDLYSKCGETKD---GRLVFDSIVEKDV-AHV 385
R G V A L ++++ SN +LI + S C GR V +V+ + V
Sbjct: 306 ERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDV 365
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+ +I Y G + +A+++FD ++ V W++II+GY +H + VF+EM S
Sbjct: 366 FVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSS 425
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT----ALTDTYAKSGD 501
G + TF VL A + +++G ++ + Y V T + D ++G
Sbjct: 426 GMATDGVTFVGVLSACSYTGKVKEGLEIFE---SMKSKYLVEPKTEHYACMVDLLGRAGL 482
Query: 502 IESSRRVFDRMP-DKNEISWTVMV 524
+ + + +MP + + I W ++
Sbjct: 483 VNDAMDLIQKMPVEADAIIWGALL 506
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 64/253 (25%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
+LF++ S + + +L S + GR +H L+K+ + ++ + L+ MY
Sbjct: 316 NLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMY 375
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
++ G+L +A+++FD ++ V W ++I+
Sbjct: 376 -------------------------------VKCGDLVKARQIFDRFSPKDIVMWNSIIT 404
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G+ +HG VE EAL++F ++ SG+ + VT
Sbjct: 405 GYAQHGLVE-------------------------------EALQVFHEMCSSGMATDGVT 433
Query: 187 FSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
F + AC+ + GL +F + K E ++ L + G V+ A + +M
Sbjct: 434 FVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKM 493
Query: 246 E-KRDVVSWTVIL 257
+ D + W +L
Sbjct: 494 PVEADAIIWGALL 506
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/545 (35%), Positives = 310/545 (56%), Gaps = 35/545 (6%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
LK L++L KP+ +S++ ++C + + G V I +GF + + N L+ +
Sbjct: 55 LKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEM 114
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K + ++ +FD M +RD+ SW +++ + +MG L EA+ +FD+MPER+ SW+ MI
Sbjct: 115 YAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMI 174
Query: 289 ARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
+ Y + P EA LFR M R + K N S L+A A++ LR G +H ++++ G+
Sbjct: 175 SGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGL 234
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ D + +AL D+Y KC G +EEA+ +
Sbjct: 235 DSDEVVWSALSDMYGKC----------------------------------GSIEEARHI 260
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD M R+ V+W+A+I Y + + F +F ++L SG PN+ TFS VL A A+ S
Sbjct: 261 FDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSE 320
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E GK +HG + ++GF F +AL Y+K G++ S+ RVF P + SWT ++ G
Sbjct: 321 ELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGY 380
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++G E+I FE + K+ P+ +T + VL AC+H+GLVDKGL YF+S++ Y +
Sbjct: 381 AQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHT 440
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C++D+L+RSG+ EAE+ I+ M +PD WASLL GC+ + N ++A+RA + L+
Sbjct: 441 ADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALF 500
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
++ E+PA YV L+NIYA+AG W + +RK M ++G+ K G SW+ ++ VH F
Sbjct: 501 EIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGD 560
Query: 708 DHNPK 712
D +PK
Sbjct: 561 DSHPK 565
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 237/541 (43%), Gaps = 112/541 (20%)
Query: 1 MKASLRSLFSIN-PETS-FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL 58
+K +L+ L I+ P S +++ I++C+ L+ QG+ +H H+ +G ++
Sbjct: 55 LKEALQILHQIDKPSASVYSTLIQSCI-------KSRLLQQGKKVHQHIKLSGFVPGLFI 107
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
RLL MY + +L ++Q+LFD MPER+
Sbjct: 108 LNRLLEMY-------------------------------AKCDSLMDSQKLFDEMPERDL 136
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
SW LISG+ K G ++E+ F++ P ++ SWTA I G+V++ EAL+LF + S
Sbjct: 137 CSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRS 196
Query: 179 -GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
K N+ T SS A A + R+G + G I + G + V ++L + K G ++
Sbjct: 197 DNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEE 256
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR +FD+M RD+V+WT ++D RY Q G
Sbjct: 257 ARHIFDKMVDRDIVTWTAMID-------------------------------RYFQDGRR 285
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+E F LF + R +PN FS VL+A A+ + G VH ++ ++G + F ++AL
Sbjct: 286 KEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASAL 345
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+ +YSKCG VF + D + SW S+I GY NGQ +EA F+ + K
Sbjct: 346 VHMYSKCGNMVSAERVFKETPQPD---LFSWTSLIAGYAQNGQPDEAIRYFELLVK---- 398
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD-LHGK 476
SG P+ TF VL A A ++KG D H
Sbjct: 399 ---------------------------SGTQPDHITFVGVLSACAHAGLVDKGLDYFHSI 431
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM---PDKNEISWTVMVRGLAESGYA 533
+ G + + D A+SG + + + +M PDK W ++ G G
Sbjct: 432 KEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDK--FLWASLLGGCRIHGNL 489
Query: 534 K 534
K
Sbjct: 490 K 490
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 38/304 (12%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
+ +EV W+AL + K G +EE+ F++ +++++WTA I + Q+G E LF
Sbjct: 235 DSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFAD 294
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
LL SG++PNE TFS + ACA LG V G + + GF+ ++L+ + K G
Sbjct: 295 LLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGN 354
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ A VF + D+ SWT +IA Y Q+
Sbjct: 355 MVSAERVFKETPQPDLFSWT-------------------------------SLIAGYAQN 383
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM-HVHAHVLKIGIEKDVFI 353
G P+EA R F + + +P+ F VLSA A + G+ + H+ + G+
Sbjct: 384 GQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADH 443
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFD 409
+IDL ++ G+ + + + K + W S++GG ++G ++ A+ LF+
Sbjct: 444 YACIIDLLARSGQFDEAENIISKMSMKPDKFL--WASLLGGCRIHGNLKLAQRAAEALFE 501
Query: 410 NMPK 413
P+
Sbjct: 502 IEPE 505
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 221/702 (31%), Positives = 357/702 (50%), Gaps = 110/702 (15%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+V +N F V +++ + G L++A+++FDGM ERN +W+A+I + + R
Sbjct: 108 LVHRVNPF---VETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQR---- 160
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
W E ++LF ++ GV P+ F I +AC
Sbjct: 161 --------------WK-------------EVVELFFLMMGDGVLPDAFLFPKILQACGNC 193
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
D + L+ + G ++ + NS++T +K G++ LAR F M++RD VSW V++
Sbjct: 194 EDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMI 253
Query: 258 DVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQ-------------------- 293
+ + G+ EARR+ D M + V++++MIA Y+Q
Sbjct: 254 AGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLA 313
Query: 294 ----------SGYPE-----EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
SG+ + +A F++M +PNT + SA ASLK+L++G+ +
Sbjct: 314 PDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEI 373
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV---------------- 382
H +K+GI ++ + N+LID+YSKCG+ + R VFD+I+EKDV
Sbjct: 374 HCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYG 433
Query: 383 ----------------AHVVSWNSMIGGYGLNGQMEEAKELF-----DNMPKRNDVSWSA 421
+VV+WN+MI G NG ++A +LF D KRN SW++
Sbjct: 434 GKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNS 493
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY + + + A+F +M PN T S+L A A+V + +K K++HG +++
Sbjct: 494 LIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRN 553
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++ + +L DTYAKSG+I+ SR VF+ M K+ I+W ++ G G + + LF+
Sbjct: 554 LESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFD 613
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M I PN T+ S++ A +G+VDKG F+S+ + I P HY +VD+ RS
Sbjct: 614 QMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRS 673
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL++A +FI MP EPD + W SLL+ C+ + N +A A K L +L ++ Y LL
Sbjct: 674 GRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLV 733
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA G++ + VRKL E ++K WVEVRN+VH F
Sbjct: 734 QAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLF 775
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 235/529 (44%), Gaps = 85/529 (16%)
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS- 220
NG EA+ + + G K + T+ ++ + C ++ LG L + G V+
Sbjct: 58 NGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRE---LHVRMGLVHRVNP 114
Query: 221 -VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V L+++ K G + AR VFD M++R
Sbjct: 115 FVETKLVSMYAKCGCLKDARKVFDGMQER------------------------------- 143
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N +WS MI Y++ +E LF M P+ F +L A + + L + +H
Sbjct: 144 NLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIH 203
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ V++ G+ + +SN+++ + KCG+ R F ++ E+D VSWN MI GY G
Sbjct: 204 SLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERD---GVSWNVMIAGYCQKG 260
Query: 400 QMEEAKELFDNMPKRN--------------------------------------DV-SWS 420
+EA+ L D M + DV +W+
Sbjct: 261 NGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWT 320
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
++ISG+ + + F +M+L+G PN T +S A AS+ SL+ G ++H IK+
Sbjct: 321 SMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKM 380
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G + +G +L D Y+K G +E++R VFD + +K+ +W M+ G ++GY ++ LF
Sbjct: 381 GIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELF 440
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ ++++ PN +T +++ C +G D+ + F ME +K N + ++ +
Sbjct: 441 MRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQ 500
Query: 601 SGRLSEAEDF---INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
G ++A + S+ F P+S S+L C +AE+ +K +
Sbjct: 501 LGEKNKALAIFRQMQSLNFSPNSVTILSILPACANV----MAEKKIKEI 545
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 318/585 (54%), Gaps = 47/585 (8%)
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ +S+ F F ++W + I + +G ++L F+ +L SG+ P+ F S+ K+
Sbjct: 56 LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM------GEVDL-ARSVFDRME 246
CA + D LG S+ G I + G + + N+L+ + K+ G L A VFD M
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+R TV V E R+IF+ MPE++ VSW+ +IA ++G EE R+ R+
Sbjct: 176 ERTRSVRTV--SVLSE----DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M + KP++ S VL +A + G +H ++ G++ D++++++LID+Y+KC
Sbjct: 230 MGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTR 289
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
D VF + E R+ +SW++II+G
Sbjct: 290 VADSCRVFTLLTE----------------------------------RDGISWNSIIAGC 315
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+++ FD F +ML++ P +FSS++ A A + +L GK LHG I + GF ++
Sbjct: 316 VQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENI 375
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+ ++L D YAK G+I +++++FDRM ++ +SWT M+ G A G A ++I LFE+ME
Sbjct: 376 FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETE 435
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PN + ++VL ACSH GLVD+ KYFNSM + I P HY V D+L R+GRL E
Sbjct: 436 GIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEE 495
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A DFI M P + WA+LLS C+ + N +AE+ + ++ + Y+LL+NIY++
Sbjct: 496 AYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSA 555
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A RW +A R M G+RK+ CSW+EV+N+V+ F + +P
Sbjct: 556 ARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHP 600
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 219/504 (43%), Gaps = 103/504 (20%)
Query: 17 FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL-------GS 69
F S +++C LL D+ NL G +LHG++I+ G+ + Y L+ MY
Sbjct: 109 FPSVLKSC-ALLMDL---NL---GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESG 161
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
R+ L A E+ FD + + + + +++F+ MPE++ VSW +I+G
Sbjct: 162 RQRLGAGEV------FDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNA 215
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
++G EE+ L++ ++ + +KP+ T SS
Sbjct: 216 RNGLYEET-------------------------------LRMIREMGGANLKPDSFTLSS 244
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ AE D G + G + G + + V +SLI + K V + VF + +RD
Sbjct: 245 VLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERD 304
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+SW I IA Q+G +E R FRQM
Sbjct: 305 GISWNSI-------------------------------IAGCVQNGLFDEGLRFFRQMLM 333
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
KP + FS ++ A A L L G +H ++ + G ++++FI+++L+D+Y+KCG +
Sbjct: 334 AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRT 393
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISG 425
+ +FD + +D +VSW +MI G L+GQ +A ELF+ M K N V++ A+++
Sbjct: 394 AKQIFDRMRLRD---MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTA 450
Query: 426 YLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
D + FN M G P +++V DL G+ +L Y
Sbjct: 451 CSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAV-------------SDLLGRAGRLEEAY 497
Query: 485 DVFLGTALTDTYAKSGDIESSRRV 508
D G + T + + S+ RV
Sbjct: 498 DFICGMHIGPTGSIWATLLSACRV 521
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 187/386 (48%), Gaps = 26/386 (6%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
++ + L ++ R+F+ + ++W +I Y G P ++ F M P+ +
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG---ETKDGRL--- 372
F VL + A L L G +H +++++G++ D++ NAL+++YSK E+ RL
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 373 -VFDSIVEKD----VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
VFD + E+ V+S +S+ +++F+ MP+++ VSW+ II+G
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSV-------------RKIFEMMPEKDLVSWNTIIAGNA 215
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+ ++ + EM + P+ T SSVL A + +GK++HG I+ G D++
Sbjct: 216 RNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIY 275
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ ++L D YAK + S RVF + +++ ISW ++ G ++G E + F +M
Sbjct: 276 VASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK 335
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
I P + S++ AC+H + G K + N + +VDM ++ G + A
Sbjct: 336 IKPKSYSFSSIMPACAHLTTLHLG-KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTA 394
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTY 633
+ + M D +W +++ GC +
Sbjct: 395 KQIFDRMRLR-DMVSWTAMIMGCALH 419
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 42/346 (12%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
S+R +F + PE KD+ S N +I G A + G+++E T R++
Sbjct: 191 SVRKIFEMMPE--------------KDLVSWNTIIAGNA------RNGLYEE---TLRMI 227
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
+ + + D V+ N +I G + G+ V+ ++
Sbjct: 228 -------REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVA-SS 279
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K RV +S F ++ ISW + I G VQNG E L+ F ++L + +KP
Sbjct: 280 LIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPK 339
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+FSSI ACA + LG + G I + GF++++ + +SL+ + K G + A+ +FD
Sbjct: 340 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFD 399
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEE 299
RM RD+VSWT ++ G +A +F++M + N V++ ++ + G +E
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDE 459
Query: 300 AFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRS------GMHV 338
A++ F MTR + P ++ V L L GMH+
Sbjct: 460 AWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 505
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 218/674 (32%), Positives = 335/674 (49%), Gaps = 95/674 (14%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +H +IKTG+H Y +RLL C+++ N
Sbjct: 19 RIIHAQMIKTGLHNTNYALSRLLEF--------------------------CILSPN--- 49
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
FDG+P V FE N++ W G
Sbjct: 50 ---------FDGLPYAISV---------------------FETIQEPNLLIWNTMFRGHA 79
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ A+KL++ ++ G+ PN TF + K+CA++ + G + G + K G+E +
Sbjct: 80 LSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLY 139
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V SLI++ +K G A VFD RDVVS+T ++ + G + A+++FDE+P ++
Sbjct: 140 VHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKD 199
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ +I+ Y +G +EA LF++M + + KP+ S V+SA A +++ G VH+
Sbjct: 200 VVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHS 259
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G+ ++ I NALIDLYSKCGE
Sbjct: 260 WIDDHGLGSNLKIVNALIDLYSKCGE---------------------------------- 285
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+E A LF + ++ +SW+ +I GY + +F EML SGE PN T S+L A
Sbjct: 286 VETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPA 345
Query: 461 SASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + +++ G+ +H I K G L T+L D YAK GDIE++ +VF+ M +
Sbjct: 346 CAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLS 405
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
+ M+ G A G A + ++F M K I P+++T + +L ACSHSG++D G + F SM
Sbjct: 406 ACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSM 465
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
Y I P HY C++D+L G EAE+ IN+M EPD W SLL CK + N ++
Sbjct: 466 TQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVEL 525
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E + L K+ E+P YVLLSNIYA+AGRW + N+R L+ +KG++K GCS +E+ +
Sbjct: 526 GESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDS 585
Query: 699 QVHFFFQKTDHNPK 712
VH F +P+
Sbjct: 586 VVHEFIIGDKFHPR 599
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 154/380 (40%), Gaps = 77/380 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL------------------- 67
LLK + +G+ +HGH++K G + Y+ T L+ MY+
Sbjct: 109 LLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRD 168
Query: 68 -----------GSRKSLE-ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM-- 113
SR +E A ++ ++ D+V N +I+ GN +EA LF M
Sbjct: 169 VVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMK 228
Query: 114 ----PE--------------------RNEVSW-------------TALISGFMKHGRVEE 136
P+ R SW ALI + K G VE
Sbjct: 229 TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ F+ ++VISW I G+ EAL LF ++L SG PN+VT SI ACA+
Sbjct: 289 ACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQ 348
Query: 197 INDFRLGLSVFGLIFK--AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ G + I K G S+ SLI + K G+++ A VF+ M R + +
Sbjct: 349 LGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACN 408
Query: 255 VILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR- 309
++ F G A IF M E +++++ +++ + SG + R+FR MT+
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQN 468
Query: 310 YSFKPNTSCFSIVLSALASL 329
Y P + ++ L L
Sbjct: 469 YKITPKLEHYGCMIDLLGHL 488
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 221/709 (31%), Positives = 359/709 (50%), Gaps = 148/709 (20%)
Query: 1 MKASLRSLFSINP-ETS-----FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHK 54
+ +L+ L SI+P E S + S ++TC +L G +H H+IK+G+
Sbjct: 99 LSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLA-------FNHGLQIHAHVIKSGLEF 151
Query: 55 ERYLTTRLLIMY--LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG 112
+R++ LL +Y LG+ + E +++FDG
Sbjct: 152 DRFVGNSLLTLYFKLGT--------------------------------DFPETRKVFDG 179
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
+ F+K +VISWT+ I G+V+ G +L+LF
Sbjct: 180 L--------------FVK-----------------DVISWTSMISGYVRVGKPMNSLELF 208
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
K+L GV+PN T S++ KAC+E+ D +LG G++ GF+ + + ++LI
Sbjct: 209 WKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALID----- 263
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
M R+ L +AR++FDE+ E + + W+ +I+
Sbjct: 264 ------------MHGRNCA--------------LDDARQLFDELLEPDAICWTSIISALT 297
Query: 293 QSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
++ + +EA R F M R + P+ F VL+A +L L+ G VHA V+ G +V
Sbjct: 298 RNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNV 357
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ ++L+D+Y KC G + E++ +FD M
Sbjct: 358 VVESSLVDMYGKC----------------------------------GSVGESQRIFDRM 383
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
P +N VSWSA++ GY ++ F V +F +M E + F ++L A +A++ +GK
Sbjct: 384 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGK 439
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H + I+ G DV + +AL D YAK G IE ++ +FD+MP +N I+W M+ G A++G
Sbjct: 440 EVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNG 499
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+E++ +F +M K I P+ ++ + +LFACSH GLVD+G +YF SM Y IK HY
Sbjct: 500 RGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHY 559
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+C+VD+L R+G L EAE I + F DS+ WA+LL C T N +IAER K + +L
Sbjct: 560 SCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEP 619
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
++ YVLL+N+Y + GRW DA+ +R+LM ++G+ K G SW+E +N +
Sbjct: 620 DYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNL 668
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 315/575 (54%), Gaps = 49/575 (8%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
GRV ++ F+R P ++V+SWTA + + G +A LF + + N VT++++
Sbjct: 49 GRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDR---PDARRNVVTWTALL 105
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
A ++FG + E++V N+++ G V A ++F+ M RD
Sbjct: 106 SGYARAGRVDEAEALFGRMP----ERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAG 161
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW ++L + G++ +AR++FD MPERN ++W+ M+A +SG EA LF M
Sbjct: 162 SWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMP--- 218
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
E++V NA+I Y++ +
Sbjct: 219 ------------------------------------ERNVVSWNAMISGYARNHMIDEAH 242
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+F + +D+A SWN MI G+ N +E A+ELFD MP+RN V+W+ +++GYL+ Q
Sbjct: 243 DLFMKMPTRDIA---SWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQ 299
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+ +FN ML+ G PN+ TF + A +++A L +G+ +H I K F +D F+ +
Sbjct: 300 SETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIEST 359
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L + YAK G+I +R+VF+ +K+ ISW M+ A G E+I+L+E+M++ PN
Sbjct: 360 LMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPN 419
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
++T + +L ACSHSGLVD+GL+ F M +I HYTC++D+ SR+GRL +A+ I
Sbjct: 420 DVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLI 479
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
+ + EP S W +LL GC ++ NE I + A +NL + + Y LL NIYASAG+W
Sbjct: 480 HFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWK 539
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
+A +R M ++GL+K GCSW+EV N+VH F +
Sbjct: 540 EAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSR 574
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/545 (26%), Positives = 242/545 (44%), Gaps = 58/545 (10%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R LF P+ S+ L+ Q ++ RAL + + T LL
Sbjct: 55 RRLFDRTPDRDVVSWT----ALVAAYACQGMLHDARAL---FDRPDARRNVVTWTALLSG 107
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + + EA + + ++V N M+ A G + +A LF+GMP R+ SW L+
Sbjct: 108 YARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILL 167
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
+ ++ G ++++ F+R P +NV++WT + G ++G EA LF G+
Sbjct: 168 AALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALF-----DGMP---- 218
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
E++V N++I+ + +D A +F +M
Sbjct: 219 ------------------------------ERNVVSWNAMISGYARNHMIDEAHDLFMKM 248
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
RD+ SW +++ FI+ +L A+ +FD+MP RN V+W+ M+ Y QS E A +LF
Sbjct: 249 PTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFN 308
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M +PN F + A ++L L G VH + K + D FI + L++LY+KCG
Sbjct: 309 GMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCG 368
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSA 421
E R VF+ EKD V+SWN MI Y +G EA L++ M K NDV++
Sbjct: 369 EIILARKVFNLSKEKD---VISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVG 425
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV---LCASASVASLEKGKDLHGKII 478
++S D +F M+ I + + LC+ A K K+
Sbjct: 426 LLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVE 485
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
++ LG + GD+ ++R + + P+ N ++T++ A +G KE+
Sbjct: 486 PSSTVWNALLGGCNSHGNESIGDL-AARNLLEAEPN-NAGTYTLLCNIYASAGKWKEAAK 543
Query: 539 LFEEM 543
+ EM
Sbjct: 544 IRSEM 548
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 221/709 (31%), Positives = 359/709 (50%), Gaps = 148/709 (20%)
Query: 1 MKASLRSLFSINP-ETS-----FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHK 54
+ +L+ L SI+P E S + S ++TC +L G +H H+IK+G+
Sbjct: 40 LSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLA-------FNHGLQIHAHVIKSGLEF 92
Query: 55 ERYLTTRLLIMY--LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG 112
+R++ LL +Y LG+ + E +++FDG
Sbjct: 93 DRFVGNSLLTLYFKLGT--------------------------------DFPETRKVFDG 120
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
+ F+K +VISWT+ I G+V+ G +L+LF
Sbjct: 121 L--------------FVK-----------------DVISWTSMISGYVRVGKPMNSLELF 149
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
K+L GV+PN T S++ KAC+E+ D +LG G++ GF+ + + ++LI
Sbjct: 150 WKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALID----- 204
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
M R+ L +AR++FDE+ E + + W+ +I+
Sbjct: 205 ------------MHGRNCA--------------LDDARQLFDELLEPDAICWTSIISALT 238
Query: 293 QSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
++ + +EA R F M R + P+ F VL+A +L L+ G VHA V+ G +V
Sbjct: 239 RNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNV 298
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ ++L+D+Y KC G + E++ +FD M
Sbjct: 299 VVESSLVDMYGKC----------------------------------GSVGESQRIFDRM 324
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
P +N VSWSA++ GY ++ F V +F +M E + F ++L A +A++ +GK
Sbjct: 325 PIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGK 380
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H + I+ G DV + +AL D YAK G IE ++ +FD+MP +N I+W M+ G A++G
Sbjct: 381 EVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNG 440
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+E++ +F +M K I P+ ++ + +LFACSH GLVD+G +YF SM Y IK HY
Sbjct: 441 RGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHY 500
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+C+VD+L R+G L EAE I + F DS+ WA+LL C T N +IAER K + +L
Sbjct: 501 SCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEP 560
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
++ YVLL+N+Y + GRW DA+ +R+LM ++G+ K G SW+E +N +
Sbjct: 561 DYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNL 609
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/674 (32%), Positives = 339/674 (50%), Gaps = 95/674 (14%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +H +IKTG+H Y ++LL + C+I+ +
Sbjct: 50 RLIHAQMIKTGLHNTNYALSKLLEL--------------------------CVISPH--- 80
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
FDG+P V FE N++ W G
Sbjct: 81 ---------FDGLPYAISV---------------------FETIQEPNLLIWNTMFRGHA 110
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ ALKL++ ++ G+ PN TF + K+CA+ F+ G + G + K G++ +
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLF 170
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V SLI++ ++ G ++ AR VFDR RDVVS+T ++ + G + A+++FDE+P ++
Sbjct: 171 VHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKD 230
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MI+ Y ++G +EA LF++M + + +P+ S V+SA A ++ G VH+
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHS 290
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G ++ I N+L+DLYSKCGE
Sbjct: 291 WIDDHGFGSNLKIVNSLMDLYSKCGE---------------------------------- 316
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+E A LF+ + ++ +SW+ +I GY + +F EML SGE PN T S+L A
Sbjct: 317 LETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPA 376
Query: 461 SASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + +++ G+ +H I K L T+L D YAK GDIE++ +VF+ + K+
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW M+ G A G A + ++F M K I P+++T + +L ACS SG++D G F +M
Sbjct: 437 SWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTM 496
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
Y I P HY C++D+L SG EAE+ IN+M EPD W SLL CK N ++
Sbjct: 497 TQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVEL 556
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E +NL K+ E+P YVLLSNIYA+AGRW + +R L+ +KG++K GCS +E+ +
Sbjct: 557 GESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDS 616
Query: 699 QVHFFFQKTDHNPK 712
VH F +P+
Sbjct: 617 VVHEFIIGDKFHPR 630
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 207/441 (46%), Gaps = 75/441 (17%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T LLK +G+ +HGH++K G
Sbjct: 133 NSY--TFPFLLKSCAKSKAFKEGQQIHGHVLKLGY------------------------- 165
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
DL VH +I+ +Q G LE+A+++FD P R+ VS+TALI G+ G +E +
Sbjct: 166 ------DLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESA 219
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F+ P ++V+SW A I G+ + G EAL+LF +++++ ++P+E T ++ ACA+
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQS 279
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
LG V I GF ++ + NSL+ L K GE++ A +F+ + +DV+SW +
Sbjct: 280 GSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTL- 338
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
I Y +EA LF++M R +PN
Sbjct: 339 ------------------------------IGGYTHMNLYKEALLLFQEMLRSGERPNDV 368
Query: 318 CFSIVLSALASLKALRSGMHVHAHV---LKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+L A A L A+ G +H ++ LK + +LID+Y+KCG+ + VF
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASS-LRTSLIDMYAKCGDIEAAHQVF 427
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHK 430
+SI+ K ++ SWN+MI G+ ++G+ + A ++F M K +D+++ ++S
Sbjct: 428 NSILHKSLS---SWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSG 484
Query: 431 QFDLVFAVFNEMLLSGEIPNK 451
DL +F M +I K
Sbjct: 485 MLDLGRHIFRTMTQDYKITPK 505
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 312/574 (54%), Gaps = 36/574 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE N++ W G + ALKL++ ++ G+ PN TF + K+CA++
Sbjct: 20 FETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKAS 79
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+ GL + G + K G+E + V SLI++ ++ ++ A VFDR RDVVS+T ++ +
Sbjct: 80 KEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGY 139
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
G + AR +FDE+P ++ VSW+ MI+ Y ++G +EA LF++M + + +P+ S
Sbjct: 140 ASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMV 199
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+SA A ++ G VH+ + G ++ I NALID YSKCGE
Sbjct: 200 TVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGE-------------- 245
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
ME A LF + ++ +SW+ +I GY + +F
Sbjct: 246 --------------------METACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQ 285
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAK 498
EML SGE PN T S+L A A + +++ G+ +H I K G L T+L D Y+K
Sbjct: 286 EMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSK 345
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
GDIE++ +VF+ M K+ +W M+ G A G A + ++F M K I P+++T + +
Sbjct: 346 CGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGL 405
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSH+G++D G F SM Y I P HY C++D+L SG EAE+ I++M EP
Sbjct: 406 LSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEP 465
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
D W SLL CK + N ++ E+ +NL+K+ +P YVLLSNIYA+AGRW + +R
Sbjct: 466 DGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRG 525
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
L+ +KG++K GCS +E+ + VH F +P+
Sbjct: 526 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 559
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 201/365 (55%), Gaps = 5/365 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A +F+ + E N + W+ M + S P A +L+ M PN+ F +L +
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A LKA + G+ +H HVLK+G E D+++ +LI +Y + +D VFD +D V
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD---V 129
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ +++ GY G +E A+ +FD +P ++ VSW+A+ISGY+E + +F EM+ +
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P++ST +V+ ASA S+E G+ +H I GF ++ + AL D Y+K G++E++
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+F + K+ ISW +++ G KE++ LF+EM ++ +PN++T+LS+L AC+H
Sbjct: 250 CGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHL 309
Query: 566 GLVDKGLKYFNSMEP-IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
G +D G ++ + + T ++DM S+ G + A NSM AW
Sbjct: 310 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWN 368
Query: 625 SLLSG 629
+++ G
Sbjct: 369 AMIFG 373
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 237/526 (45%), Gaps = 106/526 (20%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
DL VH +I+ +Q LE+A ++FD R+ VS+TAL++G+ G +E + F+
Sbjct: 96 LDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEI 155
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++V+SW A I G+V+ G EAL+LF +++++ V+P+E T ++ A A LG
Sbjct: 156 PVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGR 215
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V I GF ++ + N+LI K GE++ A +F + +DV+SW +
Sbjct: 216 QVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNI--------- 266
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+I Y +EA LF++M R PN +L
Sbjct: 267 ----------------------LIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILH 304
Query: 325 ALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
A A L A+ G +H ++ K G+ + +LID+YSKCG+ + VF+S++ K +
Sbjct: 305 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSL 364
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+WN+MI G+ ++G+ A ++F M ++N++
Sbjct: 365 P---AWNAMIFGFAMHGRANAAFDIFSRM-RKNEIK------------------------ 396
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
P+ TF +L A + L+ G+ + ++T Y + +
Sbjct: 397 ------PDDITFVGLLSACSHAGMLDLGRHIF---------------RSMTHNYKITPKL 435
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTILSVLFA 561
E + M+ L SG KE+ EEM T ++ P+ + S+L A
Sbjct: 436 E---------------HYGCMIDLLGHSGLFKEA----EEMISTMTMEPDGVIWCSLLKA 476
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGR-HYTCVVDMLSRSGRLSE 606
C G V+ G K+ + ++ I+PN Y + ++ + +GR +E
Sbjct: 477 CKMHGNVELGEKF---AQNLFKIEPNNPGSYVLLSNIYATAGRWNE 519
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 219/691 (31%), Positives = 349/691 (50%), Gaps = 99/691 (14%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+++ N I+ + L+ A++LFD MP+R VSW +IS + KHGR
Sbjct: 71 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGR------------ 118
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
FS EAL L + S +K +E TFSS+ CA + R G
Sbjct: 119 ------------------FS-EALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKL 159
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ L+ K+G E V ++L+ E+ AR VFD + +R+ V W+++L ++
Sbjct: 160 IHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNV 219
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYP-EEAFRLFRQMTRYS-FKPNTSCFSIVL 323
+ +A +F +MP R+ V+W+ +I+ ++++G +A +FR M R PN F V+
Sbjct: 220 MDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVV 279
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC------------------- 364
A L L G VH ++K G+E D I AL++ Y +C
Sbjct: 280 RACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLN 339
Query: 365 ------------GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
G +D LVF+ + E + VS+N MI GY + GQM+++K LF+ MP
Sbjct: 340 ALNSLIEGLISMGRIEDAELVFNGMTEMN---PVSYNLMIKGYAVGGQMDDSKRLFEKMP 396
Query: 413 KR--------------------------------NDVSWSAIISGYLEHKQFDLVFAVFN 440
R + V+W+++ISGY+ Q + ++
Sbjct: 397 CRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYI 456
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M +STFS++ A + + SL++G+ LH +IK F +V++GT+L D Y+K G
Sbjct: 457 TMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCG 516
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
I ++ F + N +WT ++ G A G E+I+LF+ M + + PN T + VL
Sbjct: 517 SIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLS 576
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACS +GLV++G+K F+SME Y++ P HY CVVD+L RSG + EAE+FI MP E D
Sbjct: 577 ACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADG 636
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LLS C + + ++ ER + ++ + + YV+LSNIYA GRW + M VRK++
Sbjct: 637 VVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKIL 696
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++K GCSW+E+ N++H F + +P
Sbjct: 697 RGFKVKKDPGCSWIELNNKIHVFSIEDRSHP 727
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 244/579 (42%), Gaps = 141/579 (24%)
Query: 14 ETSFNSYIETC--LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRK 71
E++F+S + C L L+D G+ +H ++K+G + + LL Y +
Sbjct: 138 ESTFSSVLSVCARLRCLRD---------GKLIHCLVLKSGSESFELVGSALLYFYASCFE 188
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
EA + L + V+ + M+ + +++A +F MP R+ V+WT LISGF K+
Sbjct: 189 IGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKN 248
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSI 190
G CG +AL++F ++ SG PNE TF +
Sbjct: 249 GDG----------------------CG--------KALEMFRLMMRSGETTPNEFTFDCV 278
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVS--------------------VC-------- 222
+AC + +G +V GL+ K G E S VC
Sbjct: 279 VRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCL 338
Query: 223 ---NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-- 277
NSLI + MG ++ A VF+ M + + VS+ +++ + G + +++R+F++MP
Sbjct: 339 NALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCR 398
Query: 278 ------------------------------ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
E++ V+W+ MI+ Y SG PEEA +L+ M
Sbjct: 399 TIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITM 458
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
R S + S FS + A + L +L+ G +HAH++K E +V++ +LID+YSKCG
Sbjct: 459 HRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSI 518
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
+ + F SI +VA +W ++I G+ +G EA LFD M ++
Sbjct: 519 MEAQTSFVSIFSPNVA---AWTALINGHAYHGLGSEAISLFDXMIEQ------------- 562
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDV 486
G PN +TF VL A + + +G K H +
Sbjct: 563 ------------------GLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTL 604
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ D +SG I + +MP + + + W ++
Sbjct: 605 EHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALL 643
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+ +++ ++S N I Y +++ A++LFD MP+R VSW+ +IS Y +H +F +
Sbjct: 66 QSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFL 125
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
M S ++STFSSVL A + L GK +H ++K G +G+AL YA
Sbjct: 126 VYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYAS 185
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
+I +RRVFD + +NE+ W++M+ G +++++F +M + + T L
Sbjct: 186 CFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVA--WTTLIS 243
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
F+ + G K L+ F M PN + CVV R G LS
Sbjct: 244 GFSKNGDG-CGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILS 289
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/622 (33%), Positives = 337/622 (54%), Gaps = 64/622 (10%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ C I+ + G ++ A+ +FD + + SW A+++G+ + R E+ F++ P +N
Sbjct: 18 ITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERN 77
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
ISW + G+V+NG EA K+F K+ E V V+++S+ + G G
Sbjct: 78 TISWNGLVSGYVKNGMISEARKVFDKMPERNV----VSWTSMVR----------GYVQEG 123
Query: 209 LIFKAGF------EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
LI +A EK+V ++ ++ G VD AR +FD + +DVV+ T ++
Sbjct: 124 LIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCS 183
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G L EAR IFDEMP+RN V+W+ MI+ Y + + A +LF M
Sbjct: 184 EGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP-------------- 229
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+K+ A++ Y++ G + +F ++ K V
Sbjct: 230 -------------------------DKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPV 264
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNE 441
A + N MI G+GLNG++ +A+ +FD M +++D +WSA+I Y E K F+L A+F+
Sbjct: 265 A---ACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIY-ERKGFELEALALFSL 320
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M G PN + S+L S+ASL+ G+ +H ++++ F D+++ + L Y K GD
Sbjct: 321 MQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGD 380
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ + +RVFDR K+ + W ++ G A+ G+ ++++ +F EM + P+E+T + VL A
Sbjct: 381 LVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSA 440
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C ++G V +GL+ F SM+ Y + HY C+VD+L R+G+L+EA + I +MP E D+
Sbjct: 441 CGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAI 500
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LLS C+T+KN +AE A K L +L Y+LLSN+YAS RW D +RK M
Sbjct: 501 VWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMR 560
Query: 682 EKGLRKSGGCSWVEVRNQVHFF 703
+ + KS GCSW+EV N+VH F
Sbjct: 561 ARNVSKSPGCSWIEVDNKVHMF 582
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 254/535 (47%), Gaps = 86/535 (16%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y +++ EA ++ + + + N +++ ++ G + EA+++FD MPERN VSWT+++
Sbjct: 57 YFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMV 116
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G+++ G ++E+ F R P +NV+SWT + G +++G EA +LF + VK
Sbjct: 117 RGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMI---PVKDVVA 173
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+ + I C+E LS IF +++V S+I+ +VD+AR +F+ M
Sbjct: 174 STNMIGGLCSEGR-----LSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM 228
Query: 246 EKRDVVSWTVIL-------------DVFIEM------------------GDLGEARRIFD 274
++ V+WT +L ++F M G++G+AR +FD
Sbjct: 229 PDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFD 288
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+M E+++ +WS +I Y + G+ EA LF M R +PN +LS SL +L
Sbjct: 289 QMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDH 348
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VH+ +++ + D+++S+ LI +Y KCG+ G+ VFD KD +V WNS+I G
Sbjct: 349 GRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKD---IVMWNSIIAG 405
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y +G E+A E VF+EM SG P++ TF
Sbjct: 406 YAQHGFGEKALE-------------------------------VFHEMFSSGAAPDEITF 434
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT----ALTDTYAKSGDIESSRRVFD 510
VL A +++G ++ + Y V T + D ++G + + + +
Sbjct: 435 IGVLSACGYTGKVKEGLEI---FESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIE 491
Query: 511 RMP-DKNEISWTVMV---RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
MP + + I W ++ R A+ + ++E +S P +LS L+A
Sbjct: 492 NMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGP--YILLSNLYA 544
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 190/367 (51%), Gaps = 22/367 (5%)
Query: 207 FGLI-FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
F LI +++ F ++ I+ ++G++D AR++FD ++ + V SW I+ +
Sbjct: 3 FRLIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKR 62
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EA+++FD+MPERN +SW+ +++ Y ++G EA ++F +M + TS
Sbjct: 63 PAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVR----- 117
Query: 326 LASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
++ G+ A +L + EK+V ++ + G + R +FD I KD
Sbjct: 118 ----GYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD--- 170
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VV+ +MIGG G++ EA+E+FD MP+RN V+W+++ISGY + + D+ +F M
Sbjct: 171 VVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPD 230
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
E+ T++++L + + +L K V + + +G++
Sbjct: 231 KNEV----TWTAMLKGYTRSGRINEAAEL----FKAMPVKPVAACNGMIMGFGLNGEVGK 282
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R VFD+M +K++ +W+ +++ G+ E++ LF M++ + PN +I+S+L C
Sbjct: 283 ARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGS 342
Query: 565 SGLVDKG 571
+D G
Sbjct: 343 LASLDHG 349
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 64/253 (25%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
+LFS+ + + +L S + GR +H L+++ + Y+++ L+ MY
Sbjct: 316 ALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMY 375
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
I+ G+L +R+FD ++ V W ++I+
Sbjct: 376 -------------------------------IKCGDLVTGKRVFDRFSSKDIVMWNSIIA 404
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G+ +H GF +AL++F ++ SG P+E+T
Sbjct: 405 GYAQH-------------------------------GFGEKALEVFHEMFSSGAAPDEIT 433
Query: 187 FSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
F + AC + GL +F + K ++ ++ L + G+++ A ++ + M
Sbjct: 434 FIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENM 493
Query: 246 E-KRDVVSWTVIL 257
+ D + W +L
Sbjct: 494 PVEADAIVWGALL 506
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 209/712 (29%), Positives = 358/712 (50%), Gaps = 139/712 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR HG +K G+ +++ LL MY +
Sbjct: 60 GRRCHGLAVKVGLDGHQFVENGLLGMY-------------------------------TK 88
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G++ +A RLFDGMP NEVS+TA++ G + G V+
Sbjct: 89 CGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVD------------------------ 124
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE--INDF------RLGLSVFGLIF 211
+AL+LF ++ +G++ + V SS+ ACA+ D+ +L S+ L+
Sbjct: 125 -------DALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVV 177
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG------- 264
+ GF V NSL+ L K ++D A VF+ + +VSW +++ + ++G
Sbjct: 178 RKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAME 237
Query: 265 ----------------------------DLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
D+ AR +FD++P+ + +W+ +++ Y Q
Sbjct: 238 VLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEEL 297
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+E LFR+M + +P+ + +++LS+ + L G VH+ +++ + D+F+++
Sbjct: 298 HQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASG 357
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LID+YSKCG+ ++F+ + E+D VV WNSMI G ++ EEA
Sbjct: 358 LIDIYSKCGQVGIALIIFNMMTERD---VVCWNSMISGLAIHSLSEEA------------ 402
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
F +M +G P +S+++S++ A ++S+ +G+ +H +
Sbjct: 403 -------------------FDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQ 443
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
++K G+ +V++G +L D YAKSG+++ +R F+ M KN ++W M+ G A++G+ +++
Sbjct: 444 VLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKA 503
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ LFE M T P+ +T ++VL CSHSGLVD+ + +FNSME Y I P HYTC++D
Sbjct: 504 VELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLID 563
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
L+R+ R +E E I MP++ D W LL+ C + N ++ E + K+L++L ++P+
Sbjct: 564 ALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSP 623
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
YVLLSNIYA+ GR DA VR LM+ +G+ K G SWV ++ F D
Sbjct: 624 YVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGSRAFMVADD 675
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 243/545 (44%), Gaps = 86/545 (15%)
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +N +SW I ++G EAL+++ +L+ G+ P T +S+ AC + G
Sbjct: 2 PDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGR 61
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
GL K G + H V N L+ + K G V A +FD M + VS+T + MG
Sbjct: 62 RCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAM------MG 115
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
L Q G ++A RLF +M+R + + S VL
Sbjct: 116 GLA-------------------------QGGAVDDALRLFARMSRTGIRVDPVAVSSVLG 150
Query: 325 ALAS--------LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
A A +A++ +HA V++ G D + N+L+DLY+K + + VF+S
Sbjct: 151 ACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFES 210
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKE------------------------------ 406
+ +VSWN +I GYG G E A E
Sbjct: 211 LSS---VSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDV 267
Query: 407 -----LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+FD +PK + +W+ ++SGY + + +F M P+++T + +L +
Sbjct: 268 PSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSC 327
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+ + + E GK +H ++L D+F+ + L D Y+K G + + +F+ M +++ + W
Sbjct: 328 SRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWN 387
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEP 580
M+ GLA ++E+ + ++M + + P E + S++ C+ + +G + + ++
Sbjct: 388 SMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKD 447
Query: 581 IYNIKPNGRHYTC-VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y+ + C ++DM ++SG + +A F N M + + AW ++ G Y
Sbjct: 448 GYD---QNVYVGCSLIDMYAKSGNMDDARLFFNCMIVK-NLVAWNEMIHG---YAQNGFG 500
Query: 640 ERAVK 644
E+AV+
Sbjct: 501 EKAVE 505
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 191/425 (44%), Gaps = 61/425 (14%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MP+RN VSW+ +IA +SG P EA +++ M + P + VLSA ++ AL G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
H +K+G++ F+ N L+ +Y+KCG D +FD + + VS+ +M+GG
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPN---EVSFTAMMGGL 117
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G +++A LF M + +G + S
Sbjct: 118 AQGGAVDDALRLFARMSR-------------------------------TGIRVDPVAVS 146
Query: 456 SVL--CASASVA------SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
SVL CA A +++ + +H +++ GF D +G +L D YAK ++ + +
Sbjct: 147 SVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIK 206
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF+ + + +SW +++ G + G + ++ + E M+++ PNE+T ++L +C +
Sbjct: 207 VFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARD 266
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FEPDSNAWA 624
V F+ + KP+ + ++ + E D M +PD A
Sbjct: 267 VPSARAMFDKIP-----KPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLA 321
Query: 625 SLLSGCKTYKN----EQIAERAVKNLWKLAEEHPAGYVL--LSNIYASAGRWIDAMNVRK 678
+LS C N +Q+ +V+ L H +V L +IY+ G+ A+ +
Sbjct: 322 VILSSCSRLGNFELGKQVHSASVRLLL-----HNDMFVASGLIDIYSKCGQVGIALIIFN 376
Query: 679 LMTEK 683
+MTE+
Sbjct: 377 MMTER 381
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 124/281 (44%), Gaps = 57/281 (20%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E+S+ S I C L + + QGR +H ++K G + Y+ L+ MY S
Sbjct: 418 ESSYASMINLCARL-------SSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKS---- 466
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
GN+++A+ F+ M +N V+W +I G+ ++G
Sbjct: 467 ---------------------------GNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGF 499
Query: 134 VEESMWYFE------RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES--GVKPNEV 185
E+++ FE + P + +++ A + G +G EA+ F +ES G+ P
Sbjct: 500 GEKAVELFEYMLTTKQKP--DSVTFIAVLTGCSHSGLVDEAVT-FFNSMESNYGITPLVE 556
Query: 186 TFSSICKACAEINDFRLGLSVFG-LIFKAG---FEKHVSVCNSLITLSLKMGEVDLARSV 241
++ + A A F +V G + +K +E ++ C ++ + ++GE A+ +
Sbjct: 557 HYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAAC--VVHHNAELGEFS-AKHL 613
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
F R++ ++ + ++ +++ +G G+A + M R V
Sbjct: 614 F-RLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVV 653
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 204/644 (31%), Positives = 349/644 (54%), Gaps = 36/644 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N I+ + GNL+EA+ +F M R+ VSW A+IS + ++G++ ++ F+ P +
Sbjct: 54 NSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATT 113
Query: 151 SWTAAICGFVQNGFSF-EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
S+ A I ++N +A +LF + E N V+++++ F ++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAECLYAE 169
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
F V+ N L++ L++G+ + A VF+ M ++VVS++ ++D + +MG + +A
Sbjct: 170 T-PVKFRDPVA-SNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDA 227
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALAS 328
R +FD MPERN ++W+ MI Y ++G+ E+ F LF +M + + N++ +++ A
Sbjct: 228 RSLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRD 287
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH---- 384
R G +H + ++ +E D+F+ N+LI +YSK G + + VF + KD
Sbjct: 288 FFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSL 347
Query: 385 ------------------------VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+VSW MI G+ G++ + ELF MP+++D++W+
Sbjct: 348 ITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWT 407
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+IS ++ + ++ F++ML PN TFSSVL A+AS+A L +G +HG+++K+
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D+ + +L Y K G+ + ++F + + N +S+ M+ G + +G+ KE++ LF
Sbjct: 468 NMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKLF 527
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+E T PN +T L++L AC H G VD G KYF SM+ Y I+P HY C+VD+ R
Sbjct: 528 SMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFGR 587
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
SG L EA + I++MP EP S W SLLS KT+ +AE A K L +L + YV+L
Sbjct: 588 SGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVL 647
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
S +Y+ G+ D + + K ++K G SW+ ++ QVH F
Sbjct: 648 SQLYSMVGKNSDCDRIMNIKKSKRIKKDPGSSWIILKGQVHNFL 691
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 210/420 (50%), Gaps = 70/420 (16%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL YL K EA + + + ++V ++ M++ + G + +A+ LFD MPERN ++W
Sbjct: 183 LLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDRMPERNVITW 242
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-V 180
TA+I G+ K GF ++GF LFL++ + G V
Sbjct: 243 TAMIDGYFK--------------------------AGFFEDGFG-----LFLRMRQEGDV 271
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ N T + + +AC + +R G + GL+ + E + + NSLI++ K+G + A++
Sbjct: 272 RVNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKA 331
Query: 241 V-------------------------------FDRMEKRDVVSWTVILDVFIEMGDLGEA 269
V F++M +D+VSWT ++ F G++ +
Sbjct: 332 VFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F MPE+++++W+ MI+ + +GY EEA F +M R PN+ FS VLSA ASL
Sbjct: 392 VELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASL 451
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G+ +H V+K+ + D+ + N+L+ +Y KCG T D +F I E + +VS+N
Sbjct: 452 ADLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN---IVSYN 508
Query: 390 SMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+MI G+ NG +EA +LF + + N V++ A++S + DL + F M S
Sbjct: 509 TMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFS 568
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 228/476 (47%), Gaps = 36/476 (7%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
CNS I+ + G + A ++F +M R +VSW ++ + E G + +A ++FDEMP R
Sbjct: 53 CNSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRAT 112
Query: 282 VSWSVMI-ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
S++ MI A +A+ LF + + N ++ +++ +R+G A
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGF-----VRAGRFDEA 163
Query: 341 HVLKIGIE---KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
L +D SN L+ Y + G+ + VF+ + K+ VVS++SM+ GY
Sbjct: 164 ECLYAETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKE---VVSYSSMVDGYCK 220
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSS 456
G++ +A+ LFD MP+RN ++W+A+I GY + F+ F +F M G++ N +T +
Sbjct: 221 MGRILDARSLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAV 280
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+ A +G +HG + ++ +D+FLG +L Y+K G + ++ VF M K+
Sbjct: 281 MFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKD 340
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW ++ GL + E+ LFE+M + ++ ++ S G + K ++ F
Sbjct: 341 SVSWNSLITGLVQREQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFG 396
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTY 633
M +I +T ++ +G EA + + M + P+S ++S+LS +
Sbjct: 397 MMPEKDDIT-----WTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASL 451
Query: 634 KN----EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+ QI R VK +A + L+S +Y G DA + ++E +
Sbjct: 452 ADLIEGLQIHGRVVK--MNMANDLSVQNSLVS-MYCKCGNTNDAYKIFSCISEPNI 504
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 10/310 (3%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +HG L + + + +L L+ MY EA + + D V N +I +
Sbjct: 293 EGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLV 352
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
Q + EA LF+ MP ++ VSWT +I GF G + + + F P ++ I+WTA I
Sbjct: 353 QREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWTAMISA 412
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
FV NG+ EAL F K+L V PN TFSS+ A A + D GL + G + K
Sbjct: 413 FVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNMAND 472
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM-- 276
+SV NSL+++ K G + A +F + + ++VS+ ++ F G EA ++F +
Sbjct: 473 LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKLFSMLES 532
Query: 277 --PERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALR 333
E N V++ +++ GY + ++ F+ M Y +P ++ ++ R
Sbjct: 533 TGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFG-----R 587
Query: 334 SGMHVHAHVL 343
SG+ A+ L
Sbjct: 588 SGLLDEAYNL 597
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 87/229 (37%), Gaps = 65/229 (28%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T +L S +I+G +HG ++K + AN
Sbjct: 437 NSY--TFSSVLSATASLADLIEGLQIHGRVVKMNM----------------------AN- 471
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
DL V N +++ + GN +A ++F + E N VS+ +ISGF
Sbjct: 472 --------DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGF--------- 514
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
NGF EA+KLF L +G +PN VTF ++ AC +
Sbjct: 515 ----------------------SYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHV 552
Query: 198 NDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
LG F + F G E ++ L + G +D A ++ M
Sbjct: 553 GYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFGRSGLLDEAYNLISTM 601
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/642 (31%), Positives = 331/642 (51%), Gaps = 75/642 (11%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
+++ V N +++ + G E A+++FD M ER
Sbjct: 159 WNVFVGNGLVSMYGRCGAWENARQVFDEMRERG--------------------------- 191
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEINDFRLG 203
+++SW + + ++Q G S A+K+F ++ E G++P+ V+ ++ ACA + + G
Sbjct: 192 -VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG 250
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V G ++G + V V N+++ + K G ++ A VF+RM+ +DVVSW ++ + ++
Sbjct: 251 KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQI 310
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
G +A +F+++ E N V+WS +IA Y Q G EA +FRQM +PN
Sbjct: 311 GRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTL 370
Query: 320 SIVLSALASLKALRSGMHVHAHVLK--IGIEK-----DVFISNALIDLYSKCGETKDGRL 372
+LS A L G H H +K + +++ D+ + NALID+YSKC K R
Sbjct: 371 VSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARA 430
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+FD I KD R+ V+W+ +I G +H +
Sbjct: 431 MFDLIPPKD--------------------------------RSVVTWTVLIGGNAQHGEA 458
Query: 433 DLVFAVFNEMLLSGE--IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-VFLG 489
+ +F++ML +PN T S L A A + +L G+ +H +++ F +F+
Sbjct: 459 NEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVA 518
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
L D Y+KSGD++++R VFD M +N +SWT ++ G G +E++ +F EM+K +
Sbjct: 519 NCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLV 578
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+ +T + VL+ACSHSG+VD+G+ YFN M + + P HY C+VD+LSR+GRL EA +
Sbjct: 579 PDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAME 638
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
I MP +P W +LLS C+ Y N ++ E A L +L + Y LLSNIYA+A
Sbjct: 639 LIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARC 698
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
W D +R LM G++K GCSWV+ R FF +P
Sbjct: 699 WKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHP 740
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 178/605 (29%), Positives = 289/605 (47%), Gaps = 76/605 (12%)
Query: 90 HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-NPF-Q 147
H C A+ + L Q L G+P T +IS ++ +++ R +P
Sbjct: 37 HQCKSLASAE---LIHQQLLVQGLPHDP----THIISMYLTFNSPAKALSVLRRLHPSSH 89
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
V W I V GF + L+L+ ++ G +P+ TF + KAC EI FR G SV
Sbjct: 90 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 149
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR---DVVSWTVILDVFIEMG 264
++F +GFE +V V N L+++ + G + AR VFD M +R D+VSW I+ +++ G
Sbjct: 150 AVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGG 209
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
D A ++F+ M E +P+ VL
Sbjct: 210 DSIRAMKMFERMTE------------------------------DLGIRPDAVSLVNVLP 239
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A AS+ A G VH + L+ G+ +DVF+ NA++D+Y+KCG ++ VF+ + KD
Sbjct: 240 ACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD--- 296
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFN 440
VVSWN+M+ GY G+ ++A LF+ + + N V+WSA+I+GY + VF
Sbjct: 297 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 356
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY-------DVFLGTALT 493
+M L G PN T S+L A +L GK+ H IK D+ + AL
Sbjct: 357 QMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 416
Query: 494 DTYAKSGDIESSRRVFDRMP--DKNEISWTVMVRGLAESGYAKESINLFEEMEKTS--IT 549
D Y+K +++R +FD +P D++ ++WTV++ G A+ G A E++ LF +M + +
Sbjct: 417 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 476
Query: 550 PNELTILSVLFACSHSGLVDKGLKYF-----NSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
PN TI L AC+ G + G + N E N C++DM S+SG +
Sbjct: 477 PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVAN-----CLIDMYSKSGDV 531
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH--PAGYVLLSN 662
A ++M + + +W SL++G Y E A++ +++ + P G +
Sbjct: 532 DAARVVFDNM-HQRNGVSWTSLMTG---YGMHGRGEEALQIFYEMQKVGLVPDGVTFVVV 587
Query: 663 IYASA 667
+YA +
Sbjct: 588 LYACS 592
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 249/540 (46%), Gaps = 111/540 (20%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +HG+ +++G+ + D+ V N +++
Sbjct: 249 RGKQVHGYALRSGLFE-------------------------------DVFVGNAVVDMYA 277
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ----NVISWTA 154
+ G +EEA ++F+ M ++ VSW A+++G+ + GR ++++ FE+ + NV++W+A
Sbjct: 278 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 337
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I G+ Q G FEAL +F ++ G +PN VT S+ CA + G + G
Sbjct: 338 VIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCA----------LAGTLLH-G 386
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
E H C++ I L + E D D++ ++D++ + AR +FD
Sbjct: 387 KETH---CHA-IKWILNLDEND---------PGDDLMVINALIDMYSKCKSPKAARAMFD 433
Query: 275 EMP--ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS--FKPNTSCFSIVLSALASLK 330
+P +R+ V+W+V+I Q G EA LF QM + PN S L A A L
Sbjct: 434 LIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLG 493
Query: 331 ALRSGMHVHAHVLKIGIEKD-VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
ALR G +HA+VL+ E +F++N LID+YSK G+ R+VFD++ +++ VSW
Sbjct: 494 ALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN---GVSWT 550
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
S++ GYG++G+ EEA ++F M K G +P
Sbjct: 551 SLMTGYGMHGRGEEALQIFYEMQK-------------------------------VGLVP 579
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGDIESS 505
+ TF VL A + +++G + + K + V G + D +++G ++ +
Sbjct: 580 DGVTFVVVLYACSHSGMVDQGINYFNGMNK---DFGVVPGAEHYACMVDLLSRAGRLDEA 636
Query: 506 RRVFDRMPDKNEIS-WTVMV---RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ MP K + W ++ R A + + N E+E S T+LS ++A
Sbjct: 637 MELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELE--SGNDGSYTLLSNIYA 694
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 313/547 (57%), Gaps = 5/547 (0%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS-VCNSL 225
EAL +L + G++ F + + CA+ F+ G V + GF++ + V N L
Sbjct: 45 EALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHL 104
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + + G AR VFD+M R++ SW +L + ++GD+ AR++FD M E++ VSW+
Sbjct: 105 IGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWN 164
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
++ Y + G EA L+R R N F+ VL LK L+ VH VL
Sbjct: 165 TIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVA 224
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G ++ +S++++D YSKCGE + R +FD ++ KD+ +W +++ GY G M A
Sbjct: 225 GFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIH---AWTTIVSGYAKWGDMNSAS 281
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
ELF MP++N VSWSA+ISGY + F +M+ G P + TFSS LCA AS+A
Sbjct: 282 ELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIA 341
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMV 524
+L+ GK +HG +I+ F + + ++L D Y+K G +E+S VF M +K ++ W M+
Sbjct: 342 ALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMI 401
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA++G+ ++++ +F +M ++ + P+ +T + +L ACSHSGLV +GL++F +M + +
Sbjct: 402 SALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGV 461
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P+ HY C++D+L R+G E + + +M +PD W++LL C+ + N ++ + +
Sbjct: 462 FPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAE 521
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+ +L + A YV L+++YA G+W VR+LM EK +RK G SW++V N+ H F
Sbjct: 522 RVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFI 581
Query: 705 QKTDHNP 711
+P
Sbjct: 582 ASDRLHP 588
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 175/324 (54%), Gaps = 2/324 (0%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+V N +I + G EA+++FD M RN SW +++G+ K G V + F+R +
Sbjct: 99 IVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEK 158
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+V+SW + + + G EA+ L+ + N +F+ + C ++ + +L V
Sbjct: 159 DVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVH 218
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + AGF ++ + +S++ K GE+ AR++FD M +D+ +WT I+ + + GD+
Sbjct: 219 GQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMN 278
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
A +F +MPE+N VSWS +I+ Y ++ EA F +M ++ P FS L A A
Sbjct: 279 SASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACA 338
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
S+ AL+ G VH ++++ + + ++LID+YSKCG + VF + K VV
Sbjct: 339 SIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQ--DVVV 396
Query: 388 WNSMIGGYGLNGQMEEAKELFDNM 411
WN+MI NG E+A ++F++M
Sbjct: 397 WNTMISALAQNGHGEKAMQMFNDM 420
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 175/347 (50%), Gaps = 18/347 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+LV+ + +++A + G + A+ LFD M ++ +WT ++SG+ K G + + F + P
Sbjct: 229 NLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMP 288
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N +SW+A I G+ +N EAL F K+++ G+ P + TFSS ACA I + G
Sbjct: 289 EKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQ 348
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMG 264
V G + + F + V +SLI + K G ++ + VF M K+DVV W ++ + G
Sbjct: 349 VHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNG 408
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCF 319
+A ++F++M E + +++ V+++ + SG +E R F+ MT + P+ +
Sbjct: 409 HGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHY 468
Query: 320 SIVLSALASLKALRSGMHVHA--HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ ++ L R+G V + + + D + +AL+ + + GR V + +
Sbjct: 469 ACLIDLLG-----RAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERV 523
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQ---MEEAKELFDN--MPKRNDVSW 419
+E ++ S+ Y G+ +E+ +EL D + K +SW
Sbjct: 524 IELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISW 570
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 319/571 (55%), Gaps = 37/571 (6%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFR 201
+NP NV SW A I G V++ + L L+ ++L +G +P+ T+S + K CA +
Sbjct: 114 QNP--NVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSY 171
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + G + K GF+K D+ + I+ + +
Sbjct: 172 MGFEILGQVLKMGFDK-------------------------------DMYLYNGIIHMLV 200
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+G+ G A ++FDE R+ VSW+ +I Y + P EA +++QM KP+
Sbjct: 201 SVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIG 260
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
V+SA A L++L+ G +H ++ + G+ + + NAL+D+Y KCG+ + G+++FD++ +K
Sbjct: 261 VVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKT 320
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V VSW +MI GY NG ++ A +LF +MP++N V+W+A+I ++ +F E
Sbjct: 321 V---VSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFRE 377
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M S P+K T L A + + +L+ G H I K DV LGTAL D YAK G+
Sbjct: 378 MQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGN 437
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ + +VF+ MP +N ++WT ++ GLA G ++I F +M + + P+E+T L VL A
Sbjct: 438 MTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTA 497
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C H GLV++G KYF+ M+ +N+ P +HY+C+V++L R+G L EAE+ I +MP E D+
Sbjct: 498 CCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAM 557
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +L C ++N I ERA L L YVLL+N+Y AG+W +A N+RK+M
Sbjct: 558 VWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMM 617
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
E+G+ K+ G S +EV ++ F + +P+
Sbjct: 618 ERGVEKTPGSSSIEVNGIINEFIVRDKSHPQ 648
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 226/477 (47%), Gaps = 83/477 (17%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ ++++SW + I G+V+ EA+ ++ +++ VKP+EVT + ACA++
Sbjct: 212 FDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESL 271
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+LG + I ++G +S+ N+L+ + +K G+++ + +FD M K+ VVSWT ++ +
Sbjct: 272 KLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGY 331
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+ G L A ++F +MPE+N V+W+ MI Q+ EA LFR+M + KP+
Sbjct: 332 AKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTML 391
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
LSA + L AL +GM H ++ K + DV + ALID+Y+KCG VF+ + +
Sbjct: 392 HCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRR 451
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ ++W ++IGG L G + +A +F F+
Sbjct: 452 N---SLTWTAIIGGLALYGNVNDA------------------------------IF-YFS 477
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+M+ SG +P++ TF VL A HG G
Sbjct: 478 KMIDSGLMPDEITFLGVLTACC-----------HG------------------------G 502
Query: 501 DIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAKESINLFEEMEKT-SITPNELT 554
+E R+ FD+M + +S ++ MV L +G +E+ EE+ KT + + +
Sbjct: 503 LVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEA----EELIKTMPMEADAMV 558
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH-YTCVVDMLSRSGRLSEAEDF 610
++ FAC G+ L + + ++ P+ Y + +M +G+ EA++
Sbjct: 559 WGALFFAC---GIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNI 612
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 178/372 (47%), Gaps = 30/372 (8%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ ++ G+LE + LFD M ++ VSWT +I G+ K+G ++ + F P +NV+
Sbjct: 294 NALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVV 353
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+W A I VQ SFEAL+LF ++ S +KP++VT AC+++ G+ I
Sbjct: 354 AWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYI 413
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K V++ +LI + K G + A VF+ M +R+ ++WT I+ G++ +A
Sbjct: 414 KKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAI 473
Query: 271 RIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSA 325
F +M + +E+++ ++ G EE + F QM +R++ P +S +++
Sbjct: 474 FYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNL 533
Query: 326 LASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKD---GRLVFDSIVEK 380
L R+G+ A L + +E D + A L+ CG ++ G +++
Sbjct: 534 LG-----RAGLLEEAEELIKTMPMEADAMVWGA---LFFACGIHRNLLIGERAASKLLDL 585
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKEL--------FDNMPKRNDVSWSAIISGYL----E 428
D + + Y G+ EEA+ + + P + + + II+ ++
Sbjct: 586 DPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKS 645
Query: 429 HKQFDLVFAVFN 440
H Q + ++ FN
Sbjct: 646 HPQSEQIYECFN 657
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSVLCASASV 464
++ +N+ N SW+A+I G +E + ++ ML +G P+ T+S + A++
Sbjct: 108 KILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANL 167
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
G ++ G+++K+GF D++L + G+ + +VFD ++ +SW ++
Sbjct: 168 VLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLI 227
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
G +E++ ++++M + P+E+T++ V+ AC+
Sbjct: 228 NGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQ 267
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 72/218 (33%)
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
N I K D+ + +I+ + GN+ +A ++F+ MP RN ++WTA+I G +G V
Sbjct: 411 NYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVN 470
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
++++YF K+++SG+ P+E+TF + AC
Sbjct: 471 DAIFYFS-------------------------------KMIDSGLMPDEITFLGVLTAC- 498
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS--- 252
C+ G V+ R FD+M+ R +S
Sbjct: 499 --------------------------CHG--------GLVEEGRKYFDQMKSRFNLSPQP 524
Query: 253 --WTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVM 287
++ ++++ G L EA + MP E + + W +
Sbjct: 525 KHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGAL 562
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 308/574 (53%), Gaps = 36/574 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE N++ W G N S ALKL++ ++ G+ PN +F + K+CA+
Sbjct: 22 FETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKAL 81
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + G + K G++ + V SLI++ + G ++ A VFDR R VVS+T ++ +
Sbjct: 82 IEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGY 141
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
G + AR++FDE+ ++ VSW+ MI+ Y ++ +EA L++ M + + KP+ S
Sbjct: 142 ASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMV 201
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+SA A ++ G +H+ + G ++ I N LIDLYSKCGE
Sbjct: 202 TVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE-------------- 247
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+E A LF + K++ +SW+ +I G+ + +F
Sbjct: 248 --------------------VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQ 287
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAK 498
EML SGE PN T SVL A A + +++ G+ +H I K G L T+L D YAK
Sbjct: 288 EMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAK 347
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
GDIE++++VFD M ++ SW M+ G A G A + +LF +M K I P+++T + +
Sbjct: 348 CGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGL 407
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSHSG++D G F SM Y I P HY C++D+L G EA++ I +MP EP
Sbjct: 408 LSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEP 467
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
D W SLL CK + N ++ E +NL K+ E+P YVLLSNIYA+AGRW +R
Sbjct: 468 DGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRT 527
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
L+ +KG++K+ GCS +E+ + VH F +P+
Sbjct: 528 LLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPR 561
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 200/367 (54%), Gaps = 9/367 (2%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A IF+ + E N + W+ M + + A +L+ M PN+ F +L +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A KAL G +H HVLK+G + D++++ +LI +Y++ G +D VFD + HV
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHR---HV 131
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ ++I GY G + A++LFD + ++ VSW+A+ISGY+E F ++ +M+ +
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P++ST +V+ A A S+E G+ LH I GF ++ + L D Y+K G++E++
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+F + K+ ISW ++ G KE++ LF+EM ++ +PN++T+LSVL AC+H
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311
Query: 566 GLVDKGL---KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
G +D G Y N + + + T ++DM ++ G + A+ +SM ++
Sbjct: 312 GAIDIGRWIHVYIN--KRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSLSS 368
Query: 623 WASLLSG 629
W +++ G
Sbjct: 369 WNAMIFG 375
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 198/422 (46%), Gaps = 71/422 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +I+G+ +HGH++K G + Y+ T L+ MY
Sbjct: 71 LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMY-------------------- 110
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
Q G LE+A ++FD R+ VS+TALI+G+ G + + F+
Sbjct: 111 -----------AQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISV 159
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW A I G+V+ EAL+L+ ++++ VKP+E T ++ ACA+ LG +
Sbjct: 160 KDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQL 219
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I GF ++ + N LI L K GEV+ A +F + K+DV+SW
Sbjct: 220 HSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISW------------- 266
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ +I + +EA LF++M R PN VL A
Sbjct: 267 ------------------NTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 308
Query: 327 ASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L A+ G +H ++ K G+ + +LID+Y+KCG+ + + VFDS++ + ++
Sbjct: 309 AHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS- 367
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFN 440
SWN+MI G+ ++G+ A +LF M K +D+++ ++S DL +F
Sbjct: 368 --SWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFR 425
Query: 441 EM 442
M
Sbjct: 426 SM 427
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 310/587 (52%), Gaps = 41/587 (6%)
Query: 131 HGRVEESMWYFE--RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
HG + ++ F+ RNP N + W I G + F AL+ ++ ++ SG +PNE TF
Sbjct: 75 HGDLSYALSLFKTIRNP--NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFP 132
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
SI K+C +I G V + K G E + V SLI + + GE+ AR VFD+ R
Sbjct: 133 SIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMR 192
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D VS+T ++ + G L EAR +FDE+P R+ VSW+ MI+ Y QSG EEA F +M
Sbjct: 193 DAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMR 252
Query: 309 RYSFKPNTSCFSIVLSALA-SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
R PN S VLSA A S +L+ G V + + G+ ++ + N LID+Y KCG+
Sbjct: 253 RAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGD- 311
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
+EEA LF+ + +N VSW+ +I GY
Sbjct: 312 ---------------------------------LEEASNLFEKIQDKNVVSWNVMIGGYT 338
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK--LGFPYD 485
+ +F M+ S PN TF S+L A A++ +L+ GK +H + K
Sbjct: 339 HMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNT 398
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
V L T+L D YAK GD+ ++R+FD M K+ +W M+ G A G+ ++ LF M
Sbjct: 399 VALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTS 458
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
P+++T + VL AC H+GL+ G +YF+SM Y + P HY C++D+ R+G
Sbjct: 459 EGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFD 518
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EAE + +M +PD W SLL C+ ++ ++AE K+L++L E+P+ YVLLSNIYA
Sbjct: 519 EAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYA 578
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
AGRW D +R + + ++K GCS +EV + VH F +P+
Sbjct: 579 GAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQ 625
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 200/427 (46%), Gaps = 60/427 (14%)
Query: 25 LCLLKDITSQNLVIQGRALHG---------------HLIKTGIHKERYLTTRLLIMYLGS 69
L L K I + N VI + G H+I +G Y +
Sbjct: 82 LSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKI 141
Query: 70 RKSLEANEIVKDLNGFDL----VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
R + E ++ + L VH +IN Q G L A+ +FD R+ VS+TALI
Sbjct: 142 RGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALI 201
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
+G+ G ++E+ F+ P ++V+SW A I G+ Q+G EA+ F ++ + V PN
Sbjct: 202 TGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVS 261
Query: 186 TFSSICKACAEI-NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
T S+ ACA+ + +LG V I G ++ + N LI + +K G+++ A ++F++
Sbjct: 262 TMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEK 321
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
++ ++VVSW V MI Y +EA LF
Sbjct: 322 IQDKNVVSWNV-------------------------------MIGGYTHMSCYKEALGLF 350
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYS 362
R+M + + PN F +L A A+L AL G VHA+V K ++ V + +LID+Y+
Sbjct: 351 RRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYA 410
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVS 418
KCG+ + +FD + K +A +WN+MI G+ ++G + A LF M +D++
Sbjct: 411 KCGDLAVAKRIFDCMNTKSLA---TWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDIT 467
Query: 419 WSAIISG 425
+ +++
Sbjct: 468 FVGVLTA 474
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 202/530 (38%), Gaps = 147/530 (27%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY---- 66
I+ T N Y T + K T +G+ +H H++K G+ ++ T L+ MY
Sbjct: 120 ISSGTEPNEY--TFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNG 177
Query: 67 --------------------------LGSRKSL-EANEIVKDLNGFDLVVHNCMINANIQ 99
S+ L EA E+ ++ D+V N MI+ Q
Sbjct: 178 ELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQ 237
Query: 100 WGNLEEAQRLFDGMPERNEV----------------------------SW---------- 121
G +EEA F+ M R +V SW
Sbjct: 238 SGRVEEAMAFFEEM-RRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNI 296
Query: 122 ---TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
LI ++K G +EE+ FE+ +NV+SW I G+ EAL LF ++++S
Sbjct: 297 RLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQS 356
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK--AGFEKHVSVCNSLITLSLKMGEVD 236
+ PN+VTF SI ACA + LG V + K + V++ SLI + K G++
Sbjct: 357 NIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLA 416
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
+A+ +FD M + + +W + MI+ + G+
Sbjct: 417 VAKRIFDCMNTKSLATW-------------------------------NAMISGFAMHGH 445
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+ A LF +MT F P+ F VL+A HA +L +
Sbjct: 446 TDTALGLFSRMTSEGFVPDDITFVGVLTACK-----------HAGLLSL----------- 483
Query: 357 LIDLYSKCGETKDGRLVFDSIVE--KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
GR F S+++ K + + MI +G G +EA+ L NM +
Sbjct: 484 -------------GRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMK 530
Query: 415 NDVS-WSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASA 462
D + W +++ H++ +L +V + L E P+ S + A A
Sbjct: 531 PDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGA 580
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 17/272 (6%)
Query: 116 RNEVS-WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
+N V+ WT+LI + K G + + F+ +++ +W A I GF +G + AL LF +
Sbjct: 396 KNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSR 455
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMG 233
+ G P+++TF + AC LG F +I + +I L + G
Sbjct: 456 MTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAG 515
Query: 234 EVDLARSVFDRME-KRDVVSWTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVM 287
D A ++ ME K D W +L IE+ + A+ +F+ PE N ++ ++
Sbjct: 516 LFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAE-SVAKHLFELEPE-NPSAYVLL 573
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH------ 341
Y +G E+ ++ ++ K C SI + ++ + +H ++
Sbjct: 574 SNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKML 633
Query: 342 -VLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+ + +EK F+ + LY E K+G L
Sbjct: 634 DEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVL 665
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 310/539 (57%), Gaps = 5/539 (0%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK-HVSVCNSL 225
+A+ L + G++ +S+ + C + + G + + GF++ + + N L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + +K G+ A VFD+M R++ SW ++ +++ G L AR +FD MPER+ VSW+
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
M+ Y Q G EA +++ R K N F+ +L+A + L+ H VL
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G +V +S ++ID Y+KCG+ + + FD + KD+ H+ W ++I GY G ME A+
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI-HI--WTTLISGYAKLGDMEAAE 265
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
+LF MP++N VSW+A+I+GY+ + +F +M+ G P + TFSS LCASAS+A
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMV 524
SL GK++HG +I+ + + ++L D Y+KSG +E+S RVF DK++ + W M+
Sbjct: 326 SLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMI 385
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA+ G +++ + ++M K + PN T++ +L ACSHSGLV++GL++F SM + I
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P+ HY C++D+L R+G E I MPFEPD + W ++L C+ + NE++ ++A
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L KL E A Y+LLS+IYA G+W +R +M ++ + K SW+E+ +V F
Sbjct: 506 ELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAF 564
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 226/461 (49%), Gaps = 16/461 (3%)
Query: 63 LIMYLGSRKSLEANEIVK---DLNGF---DLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
L+ G KSL+ + + + GF + ++ N +I ++ G +A ++FD M R
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N SW ++SG++K G + + F+ P ++V+SW + G+ Q+G EAL + +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
SG+K NE +F+ + AC + +L G + AGF +V + S+I K G+++
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A+ FD M +D+ WT ++ + ++GD+ A ++F EMPE+N VSW+ +IA Y + G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
A LFR+M KP FS L A AS+ +LR G +H ++++ + + + ++
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK--- 413
LID+YSK G + VF + D V WN+MI +G +A + D+M K
Sbjct: 352 LIDMYSKSGSLEASERVFR--ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 414 -RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGK 471
N + I++ + F M + G +P++ ++ ++ K
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF---K 466
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+L KI ++ F D + A+ G+ E ++ D +
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL 507
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/576 (34%), Positives = 319/576 (55%), Gaps = 11/576 (1%)
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P + S+++ I F ++ L F L + P+ S K+CA + G
Sbjct: 65 PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ +GF V +SL + LK + AR +FDRM RDVV W+ ++ + +G
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184
Query: 265 DLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+ EA+ +F EM E N VSW+ M+A + +G+ +EA +FR M F P+ S S
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VL A+ L+ + G VH +V+K G+ D F+ +A++D+Y KCG K+ VFD + E
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELF----DNMPKRNDVSWSAIISGYLEHKQFDLVF 436
++ S N+ + G NG ++ A E+F D + N V+W++II+ ++ +
Sbjct: 305 EIG---SLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEAL 361
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F +M G PN T S++ A ++++L GK++H ++ G DV++G+AL D Y
Sbjct: 362 ELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMY 421
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
AK G I+ +RR FD+M N +SW +++G A G AKE++ +F M ++ P+ +T
Sbjct: 422 AKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFT 481
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
VL AC+ +GL ++G + +NSM + I+P HY C+V +LSR G+L EA I MPF
Sbjct: 482 CVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPF 541
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
EPD+ W +LLS C+ + N + E A + L+ L +P Y+LLSNIYAS G W + +
Sbjct: 542 EPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRI 601
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
R++M KGLRK+ G SW+EV ++VH +P+
Sbjct: 602 REVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQ 637
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 219/469 (46%), Gaps = 51/469 (10%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGF--------DLVVHNCMINANIQWGNLEEAQRLFDGM 113
LL + S SL A + + L+ F D +V + + + ++ + +A++LFD M
Sbjct: 106 LLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRM 165
Query: 114 PERNEVSWTALISGFMKHGRVEESMWYFER----NPFQNVISWTAAICGFVQNGFSFEAL 169
P+R+ V W+A+I+G+ + G VEE+ F N++SW + GF NGF EA+
Sbjct: 166 PDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAV 225
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
+F +L G P+ T S + A + D +G V G + K G V ++++ +
Sbjct: 226 GMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMY 285
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF----DEMPERNEVSWS 285
K G V VFD +E+ ++ S L G + A +F D+ E N V+W+
Sbjct: 286 GKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWT 345
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
+IA +Q+G EA LFR M Y +PN ++ A ++ AL G +H L+
Sbjct: 346 SIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRR 405
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
GI DV++ +ALID+Y+KCG + R FD + ++VSWN+++ GY ++G+ +E
Sbjct: 406 GIFDDVYVGSALIDMYAKCGRIQLARRCFDKM---SALNLVSWNAVMKGYAMHGKAKETM 462
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
E+ F+ ML SG+ P+ TF+ VL A A
Sbjct: 463 EM-------------------------------FHMMLQSGQKPDLVTFTCVLSACAQNG 491
Query: 466 SLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
E+G + + + G + L ++ G +E + + MP
Sbjct: 492 LTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMP 540
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 158/318 (49%), Gaps = 8/318 (2%)
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+P S+S +I + +S + F + P+ + + ASL+AL
Sbjct: 63 HLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDP 122
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +HA G D ++++L +Y KC D R +FD + ++D VV W++MI G
Sbjct: 123 GQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRD---VVVWSAMIAG 179
Query: 395 YGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
Y G +EEAKELF M + N VSW+ +++G+ + +D +F ML+ G P+
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
ST S VL A + + G +HG +IK G D F+ +A+ D Y K G ++ RVFD
Sbjct: 240 GSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFD 299
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+ + S + GL+ +G ++ +F + + + N +T S++ +CS +G +
Sbjct: 300 EVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLE 359
Query: 571 GLKYFNSMEPIYNIKPNG 588
L+ F M+ Y ++PN
Sbjct: 360 ALELFRDMQA-YGVEPNA 376
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 158/345 (45%), Gaps = 43/345 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C+L + V+ G +HG++IK G+ ++++ + +L MY
Sbjct: 242 TVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMY---------------- 285
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G ++E R+FD + E S A ++G ++G V+ ++ F
Sbjct: 286 ---------------GKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFN 330
Query: 143 RNPFQ----NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
+ Q NV++WT+ I QNG EAL+LF + GV+PN VT S+ AC I+
Sbjct: 331 KFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNIS 390
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + + G V V ++LI + K G + LAR FD+M ++VSW ++
Sbjct: 391 ALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMK 450
Query: 259 VFIEMGDLGEARRIFDEMPERNE----VSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFK 313
+ G E +F M + + V+++ +++ Q+G EE +R + M+ + +
Sbjct: 451 GYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIE 510
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
P ++ +++ L+ + L + + ++ E D + AL+
Sbjct: 511 PKMEHYACLVTLLSRVGKLEEAYSI---IKEMPFEPDACVWGALL 552
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
L ++P S+S++I + F V F+ + IP+ S + + AS+ +
Sbjct: 60 LSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRA 119
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L+ G+ LH GF D + ++LT Y K I +R++FDRMPD++ + W+ M+ G
Sbjct: 120 LDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAG 179
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
+ G +E+ LF EM + PN ++ +L ++G D+ + F M + P
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMML-VQGFWP 238
Query: 587 NGRHYTCVV 595
+G +CV+
Sbjct: 239 DGSTVSCVL 247
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALI + K GR++ + F++ N++SW A + G+ +G + E +++F +L+SG K
Sbjct: 415 SALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQK 474
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ VTF+ + ACA+ G + + + G E + L+TL ++G+++ A S
Sbjct: 475 PDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYS 534
Query: 241 VFDRME-KRDVVSWTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ M + D W +L + +G++ + F E N ++ ++ Y
Sbjct: 535 IIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLE--PTNPGNYILLSNIYASK 592
Query: 295 GYPEEAFRLFRQMTRYSFKPN 315
G +E R+ M + N
Sbjct: 593 GLWDEENRIREVMKSKGLRKN 613
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES---SRRVFDRMPDK 515
C S+S ASL + + H I++L D L T+L YA + + + S + +P
Sbjct: 8 CLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHP 67
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
S++ ++ A S + + F + + P+ + S + +C+ +D G +
Sbjct: 68 TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG-QQL 126
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ + + + M + R+ +A + MP + D W+++++G
Sbjct: 127 HAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMP-DRDVVVWSAMIAG 179
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 313/578 (54%), Gaps = 40/578 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE P N + W G + ALKL++ ++ G+ PN TF + K+CA+ F
Sbjct: 32 FETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTF 91
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+ G + G + K GF+ + V SLI++ + G ++ A+ VFDR RDVVS+T ++ +
Sbjct: 92 KEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGY 151
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
G + A+++FDE+P ++ VSW+ MI+ Y ++G ++A LF++M + + KP+ S +
Sbjct: 152 ASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMA 211
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+SA A ++ G VH+ + G ++ I NALIDLYSKCGE
Sbjct: 212 TVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE-------------- 257
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+E A EL + + ++ +SW+ +I GY + +F
Sbjct: 258 --------------------VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQ 297
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK----LGFPYDVFLGTALTDTY 496
EML SGE PN T S+L A A + +++ G+ +H I K + L T+L D Y
Sbjct: 298 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMY 357
Query: 497 AKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
AK GDI+++ +V D +S W M+ G A G A + ++F M K I P+++T
Sbjct: 358 AKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITF 417
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+ +L ACSHSG++D G F SM YNI P HY C++D+L SG EAE+ IN+MP
Sbjct: 418 VGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP 477
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
EPD W SLL CK + N ++ E K L K+ E+P YVLLSNIYA+AG+W +
Sbjct: 478 MEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXK 537
Query: 676 VRKLMTEKGLRKS-GGCSWVEVRNQVHFFFQKTDHNPK 712
+R L+ +KG++K GCS +E+ + VH F +P+
Sbjct: 538 IRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQ 575
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 202/367 (55%), Gaps = 6/367 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A +F+ +PE N++ W++M + S P A +L+ M PN F +L +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A K + G +H HVLK+G + D+++ +LI +Y++ G +D + VFD +D V
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD---V 141
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ ++I GY G +E A+++FD +P ++ VSW+A+ISGY E + +F EM+ +
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P++ST ++V+ A A S+E G+ +H I GF ++ + AL D Y+K G++E++
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+ + + +K+ ISW ++ G KE++ LF+EM ++ TPN++T+LS+L AC+H
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321
Query: 566 GLVDKGL---KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
G +D G Y + + T ++DM ++ G + A +S F +
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381
Query: 623 WASLLSG 629
W +++ G
Sbjct: 382 WNAMIFG 388
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 194/426 (45%), Gaps = 76/426 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +G+ +HGH++K G D
Sbjct: 81 LLKSCAKSKTFKEGQQIHGHVLKLGF-------------------------------DLD 109
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L VH +I+ Q G LE+AQ++FD R+ VS+TALI+G+ G +E + F+ P
Sbjct: 110 LYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPI 169
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW A I G+ + G +AL+LF +++++ VKP+E T +++ ACA+ LG V
Sbjct: 170 KDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQV 229
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I GF ++ + N+LI L K GEV+ A + + + +DV+SW +
Sbjct: 230 HSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTL---------- 279
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
I Y +EA LF++M R PN +L A
Sbjct: 280 ---------------------IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 318
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNA------LIDLYSKCGETKDGRLVFDSIVEK 380
A L A+ G +H ++ K K V ++NA LID+Y+KCG+ V DS
Sbjct: 319 AHLGAIDIGRWIHVYIDK--KLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFN 376
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVF 436
+ +WN+MI G+ ++G+ A ++F M K +D+++ ++S DL
Sbjct: 377 --RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 434
Query: 437 AVFNEM 442
+F M
Sbjct: 435 NIFRSM 440
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 314/547 (57%), Gaps = 5/547 (0%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS-VCNSL 225
EAL +L + GV+ F + + CA+ F+ G V + GF++ + V N L
Sbjct: 45 EALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHL 104
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + + G AR VFD+M R++ SW +L + ++GD+ AR++FD M E++ VSW+
Sbjct: 105 IGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWN 164
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
++ Y + G EA L+R R N F+ VL LK L+ VH VL
Sbjct: 165 TIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVA 224
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G ++ +S++++D Y+KCGE + R +FD ++ KD+ +W +++ GY G M A
Sbjct: 225 GFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIH---AWTTIVSGYAKWGDMNSAS 281
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
ELF MP++N VSWSA+ISGY + F +M+ G P + TFSS LCA AS+A
Sbjct: 282 ELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIA 341
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMV 524
+L+ GK +HG +I+ F + + ++L D Y+K G +E+S VF M +K ++ W M+
Sbjct: 342 ALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMI 401
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA++G+ ++++ +F +M ++ + P+ +T + +L ACSHSGLV +GL++F +M + +
Sbjct: 402 SALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGV 461
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P+ HY+C++D+L R+G E + + +M +PD W++LL C+ + N ++ + +
Sbjct: 462 FPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAE 521
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+ +L + A YV L+++YA G+W VR+LM EK +RK G SW++V N+ H F
Sbjct: 522 RVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFI 581
Query: 705 QKTDHNP 711
+P
Sbjct: 582 ASDRLHP 588
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 175/324 (54%), Gaps = 2/324 (0%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+V N +I + G EA+++FD M RN SW +++G+ K G V + F+R +
Sbjct: 99 IVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEK 158
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+V+SW + + + G EA+ L+ + N +F+ + C ++ + +L V
Sbjct: 159 DVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVH 218
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + AGF ++ + +S++ K GE+ AR++FD M +D+ +WT I+ + + GD+
Sbjct: 219 GQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMN 278
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
A +F +MPE+N VSWS +I+ Y ++ EA F +M ++ P FS L A A
Sbjct: 279 SASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACA 338
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
S+ AL+ G VH ++++ + + ++LID+YSKCG + VF + K VV
Sbjct: 339 SIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQ--DVVV 396
Query: 388 WNSMIGGYGLNGQMEEAKELFDNM 411
WN+MI NG E+A ++F++M
Sbjct: 397 WNTMISALAQNGHGEKAMQMFNDM 420
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 175/347 (50%), Gaps = 18/347 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+LV+ + +++A + G + A+ LFD M ++ +WT ++SG+ K G + + F + P
Sbjct: 229 NLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMP 288
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N +SW+A I G+ +N EAL F K+++ G+ P + TFSS ACA I + G
Sbjct: 289 EKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQ 348
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMG 264
V G + + F + V +SLI + K G ++ + VF M K+DVV W ++ + G
Sbjct: 349 VHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNG 408
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCF 319
+A ++F++M E + +++ V+++ + SG +E R F+ MT + P+ +
Sbjct: 409 HGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHY 468
Query: 320 SIVLSALASLKALRSGMHVHA--HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
S ++ L R+G V + + + D + +AL+ + + GR V + +
Sbjct: 469 SCLIDLLG-----RAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERV 523
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQ---MEEAKELFDN--MPKRNDVSW 419
+E ++ S+ Y G+ +E+ +EL D + K +SW
Sbjct: 524 IELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISW 570
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 219/691 (31%), Positives = 348/691 (50%), Gaps = 99/691 (14%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+++ N I+ + L+ A++LFD MP+R VSW +IS + KHGR
Sbjct: 31 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGR------------ 78
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
FS EAL L + S +K +E TFSS+ CA + R G
Sbjct: 79 ------------------FS-EALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKL 119
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ L+ K+G E V ++L+ E+ AR VFD + +R+ V W+++L ++
Sbjct: 120 IHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNV 179
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSG-YPEEAFRLFRQMTRYS-FKPNTSCFSIVL 323
+ +A +F +MP R+ V+W+ +I+ ++++G +A +FR M R PN F V+
Sbjct: 180 MDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVV 239
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC------------------- 364
A L L G VH ++K G+E D I AL++ Y +C
Sbjct: 240 RACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLN 299
Query: 365 ------------GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
G +D LVF+ + E + VS+N MI GY + GQM+++K LF+ MP
Sbjct: 300 ALNSLIEGLISMGRIEDAELVFNGMTEMN---PVSYNLMIKGYAVGGQMDDSKRLFEKMP 356
Query: 413 KR--------------------------------NDVSWSAIISGYLEHKQFDLVFAVFN 440
R + V+W+++ISGY+ Q + ++
Sbjct: 357 CRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYI 416
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M +STFS++ A + + SL +G+ LH +IK F +V++GT+L D Y+K G
Sbjct: 417 TMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCG 476
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
I ++ F + N +WT ++ G A G E+I+LF+ M + + PN T + VL
Sbjct: 477 SIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLS 536
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACS +GLV++G+K F+SME Y++ P HY CVVD+L RSG + EAE+FI MP E D
Sbjct: 537 ACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADG 596
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LLS C + + ++ ER + ++ + + YV+LSNIYA GRW + M VRK++
Sbjct: 597 VVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKIL 656
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++K GCSW+E+ N++H F + +P
Sbjct: 657 RGFKVKKDPGCSWIELNNKIHVFSIEDRSHP 687
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 243/579 (41%), Gaps = 141/579 (24%)
Query: 14 ETSFNSYIETC--LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRK 71
E++F+S + C L L+D G+ +H ++K+G + + LL Y +
Sbjct: 98 ESTFSSVLSVCARLRCLRD---------GKLIHCLVLKSGSESFELVGSALLYFYASCFE 148
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
EA + L + V+ + M+ + +++A +F MP R+ V+WT LISGF K+
Sbjct: 149 IGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKN 208
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSI 190
G CG +AL++F ++ SG PNE TF +
Sbjct: 209 GDG----------------------CG--------KALEIFRLMMRSGETTPNEFTFDCV 238
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVS--------------------VC-------- 222
+AC + +G +V GL+ K G E S VC
Sbjct: 239 VRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCL 298
Query: 223 ---NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-- 277
NSLI + MG ++ A VF+ M + + VS+ +++ + G + +++R+F++MP
Sbjct: 299 NALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCR 358
Query: 278 ------------------------------ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
E++ V+W+ MI+ Y SG PEEA +L+ M
Sbjct: 359 TIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITM 418
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
R S + S FS + A + L +L G +HAH++K E +V++ +LID+YSKCG
Sbjct: 419 HRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSI 478
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
+ + F SI +VA +W ++I G+ +G EA LFD M ++
Sbjct: 479 MEAQTSFVSIFSPNVA---AWTALINGHAYHGLGSEAISLFDRMIEQ------------- 522
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDV 486
G PN +TF VL A + + +G K H +
Sbjct: 523 ------------------GLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTL 564
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ D +SG I + +MP + + + W ++
Sbjct: 565 EHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALL 603
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+ +++ ++S N I Y +++ A++LFD MP+R VSW+ +IS Y +H +F +
Sbjct: 26 QSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFL 85
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
M S ++STFSSVL A + L GK +H ++K G +G+AL YA
Sbjct: 86 VYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYAS 145
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
+I +RRVFD + +NE+ W++M+ G +++++F +M + + T L
Sbjct: 146 CFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVA--WTTLIS 203
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
F+ + G K L+ F M PN + CVV R G LS
Sbjct: 204 GFSKNGDG-CGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILS 249
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 214/670 (31%), Positives = 351/670 (52%), Gaps = 54/670 (8%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+A ++ ++ +LV N MI + +EEA LFD MPER+ SW +I+ + + G+
Sbjct: 66 DARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGK 125
Query: 134 VEESMWYFERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
+E++ E P + + W A I G+ + G +A K+F E + V+++S+
Sbjct: 126 LEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVF----EQMPAKDLVSYNSMLA 181
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
+ L L F++ E++V N ++ +K G++ A +F+++ + VS
Sbjct: 182 GYTQNGKMHLALQ----FFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVS 237
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W +L + G + EAR +FD MP +N VSW+ MIA Y Q +EA +LF++M
Sbjct: 238 WVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPH--- 294
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
++ ++ +++ + L V+ + KD+ AL+ + G +
Sbjct: 295 -KDSVSWTTIINGYIRVGKLDEARQVYNQMPC----KDITAQTALMSGLIQNGRIDEADQ 349
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+F I DV V WNSMI GY +G+M+EA LF MP +N VSW+ +ISGY + Q
Sbjct: 350 MFSRIGAHDV---VCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQM 406
Query: 433 DLVFAVFNEM----------LLSG---------------------EIPNKSTFSSVLCAS 461
D +F M L++G + P++STF+ L A
Sbjct: 407 DRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSAC 466
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A++A+L+ G LH I+K G+ D+F+G AL YAK G ++S+ +VF + + ISW
Sbjct: 467 ANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWN 526
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ G A +GYA ++ FE+M + P+E+T + +L ACSH+GL ++GL F M
Sbjct: 527 SLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIED 586
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
+ I+P HY+C+VD+L R GRL EA + + M + ++ W SLL C+ +KN ++
Sbjct: 587 FAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRF 646
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A + L++L + + Y+ LSN++A AGRW + VR LM K K GCSW+EV+NQ+
Sbjct: 647 AAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQ 706
Query: 702 FFFQKTDHNP 711
F H+P
Sbjct: 707 HFL---SHDP 713
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 255/526 (48%), Gaps = 57/526 (10%)
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
+LG+ G +AG KH N I K+G+V+ A +F M +++V++ ++ V
Sbjct: 3 LKLGIRSIG---EAG--KHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISV 57
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + +AR++FD+M RN VSW+ MIA Y + EEA LF M P F
Sbjct: 58 LAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVM------PERDNF 111
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIV 378
S L + + + + +L++ +K D NA+I Y+K G+ D + VF+ +
Sbjct: 112 SWAL--MITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMP 169
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
KD +VS+NSM+ GY NG+M A + F++M +RN VSW+ +++GY++ + +
Sbjct: 170 AKD---LVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQL 226
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F ++ PN ++ ++LC A + + ++L ++ +V A+ TY +
Sbjct: 227 FEKI----PNPNAVSWVTMLCGLAKYGKMAEARELFDRMP----SKNVVSWNAMIATYVQ 278
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
++ + ++F +MP K+ +SWT ++ G G E+ ++ +M IT + ++S
Sbjct: 279 DLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITA-QTALMSG 337
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH----YTCVVDMLSRSGRLSEAEDFINSM 614
L +G +D+ + F+ + G H + ++ SRSGR+ EA + M
Sbjct: 338 LI---QNGRIDEADQMFSRI---------GAHDVVCWNSMIAGYSRSGRMDEALNLFRQM 385
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P + +S +W +++SG Y +RA + + E++ + L + ++DA+
Sbjct: 386 PIK-NSVSWNTMISG---YAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDAL 441
Query: 675 NVRKLMTEKG-----------LRKSGGCSWVEVRNQVHFFFQKTDH 709
+M ++G L + ++V NQ+H + K+ +
Sbjct: 442 KSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGY 487
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 187/447 (41%), Gaps = 79/447 (17%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL 62
A R LF P + S+ ++D+ V L K HK+ T +
Sbjct: 252 AEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAV--------KLFKKMPHKDSVSWTTI 303
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
+ Y+ K EA ++ + D+ +++ IQ G ++EA ++F + + V W
Sbjct: 304 INGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWN 363
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAI-------------------------- 156
++I+G+ + GR++E++ F + P +N +SW I
Sbjct: 364 SMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVS 423
Query: 157 -----CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
GF+QN +ALK + + + G KP++ TF+ ACA + ++G + I
Sbjct: 424 WNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYIL 483
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K+G+ + V N+LI + K G V A VF +E D++SW
Sbjct: 484 KSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISW------------------ 525
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+ +I+ Y +GY +AF+ F QM+ P+ F +LSA +
Sbjct: 526 -------------NSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGL 572
Query: 332 LRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-AHVVSWN 389
G+ + +++ IE + L+DL + G ++ F+++ V A+ W
Sbjct: 573 ANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEA---FNTVRGMKVKANAGLWG 629
Query: 390 SMIGGYGLNGQME----EAKELFDNMP 412
S++G ++ +E A+ LF+ P
Sbjct: 630 SLLGACRVHKNLELGRFAAERLFELEP 656
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 315/612 (51%), Gaps = 65/612 (10%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
++++++Q +L A +LFD +P+ N+ + LI G+ +P ++++ +
Sbjct: 74 LVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSN-----------SSDPIKSLLLY 122
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
+C G+ PN+ T + KACA + + LG+ V FK
Sbjct: 123 RRMVC--------------------DGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFK 162
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
G H V N+ IL++++ G + ARR+
Sbjct: 163 LGMGSHACVQNA-------------------------------ILNIYVACGLITSARRV 191
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
FD++ ER VSW+ MI Y++ G EEA +FR+M +P+ +LS
Sbjct: 192 FDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNF 251
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G VH H++ GIE D ++NAL+D+Y+KCG K + VFD +++KDV VSW MI
Sbjct: 252 DLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDV---VSWTCMI 308
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
Y +G ++ A E F+ MP +N VSW++II +++ + +F M SG + N +
Sbjct: 309 NAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDT 368
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T ++L + + + L GK H I L A+ D YAK G ++++ VF M
Sbjct: 369 TLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGM 428
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
P+KN +SW V++ LA GY KE+I +FE+M+ + + P+E+T +L ACSHSGLVD G
Sbjct: 429 PEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQ 488
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
YF M + I P+ HY C+VD+L R G L EA I MP +PD W++LL C+T
Sbjct: 489 HYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRT 548
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
Y N I ++ +K L +L + YVLLSN+Y+ + RW D N+ K++ + G++K S
Sbjct: 549 YGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAIS 608
Query: 693 WVEVRNQVHFFF 704
++E+ + F
Sbjct: 609 FIEIDGCCYQFM 620
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 201/444 (45%), Gaps = 69/444 (15%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G V N ++N + G + A+R+FD + ER VSW ++I+G+ K GR E
Sbjct: 166 GSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSE-------- 217
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
EA+ +F ++ E G++P+ T + + +F LG
Sbjct: 218 -----------------------EAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLG 254
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V + G E V N+L+ + K G + A+SVFD+M +DVVSWT +++ +
Sbjct: 255 RFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANH 314
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G + A F++MP +N VSW+ +I + Q G EA LF +M N + +L
Sbjct: 315 GLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAIL 374
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
S+ + + L G H+++ I + NA+ID+Y+KCG + VF + EK+
Sbjct: 375 SSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKN-- 432
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSWN +IG L+G +EA E+F+ M
Sbjct: 433 -AVSWNVIIGALALHGYGKEAIEMFEKMQA------------------------------ 461
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGD 501
SG P++ TF+ +L A + ++ G+ + +I+ L G DV + D + G
Sbjct: 462 -SGVCPDEITFTGLLSACSHSGLVDTGQH-YFEIMNLTFGISPDVEHYACMVDLLGRRGL 519
Query: 502 IESSRRVFDRMPDKNE-ISWTVMV 524
+ + + +MP K + + W+ ++
Sbjct: 520 LGEAISLIKKMPVKPDVVVWSALL 543
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 175/377 (46%), Gaps = 46/377 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H H++ TGI + +T L+ MY +
Sbjct: 254 GRFVHLHMVVTGIEIDSIVTNALMDMY-------------------------------AK 282
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GNL+ A+ +FD M +++ VSWT +I+ + HG ++ ++ +F + P +NV+SW + I
Sbjct: 283 CGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCH 342
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
VQ G EA+ LF ++ +SGV N+ T +I +C+ + D LG IF
Sbjct: 343 VQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSA 402
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
++CN++I + K G + A VF M +++ VSW VI+ G EA +F++M
Sbjct: 403 TLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQAS 462
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRS 334
+E++++ +++ + SG + F M + P+ ++ ++ L L
Sbjct: 463 GVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGE 522
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+ + + K+ ++ DV + +AL+ G G+ + ++E + +NS G
Sbjct: 523 AISL---IKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLE-----LGRYNS--GL 572
Query: 395 YGLNGQMEEAKELFDNM 411
Y L M + +D+M
Sbjct: 573 YVLLSNMYSESQRWDDM 589
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 165/372 (44%), Gaps = 42/372 (11%)
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P ++ SLK L+ HVHA ++ G+ V G+LV
Sbjct: 34 PTHQTLHYLIDQCISLKQLK---HVHAQIILHGLATQVLTL---------------GKLV 75
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
S+ +D+ + A +LFD +P+ N ++ +I GY
Sbjct: 76 SSSVQLRDLRY-------------------AHKLFDQIPQPNKFMFNHLIKGYSNSSDPI 116
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
++ M+ G +PN+ T VL A A+ + G +H + KLG + A+
Sbjct: 117 KSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAIL 176
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
+ Y G I S+RRVFD + ++ +SW M+ G ++ G ++E++ +F EM++ + P+
Sbjct: 177 NIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVF 236
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T++ +L + G D G ++ + + I+ + ++DM ++ G L A+ +
Sbjct: 237 TLVGLLSVSTKHGNFDLG-RFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQ 295
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
M + D +W +++ Y N + + A++ ++ ++ + + + G + +A
Sbjct: 296 M-LDKDVVSWTCMINA---YANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEA 351
Query: 674 MNVRKLMTEKGL 685
+++ M + G+
Sbjct: 352 VDLFYRMCDSGV 363
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 324/595 (54%), Gaps = 65/595 (10%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+ S + +IS + + E++ F+ V++W + I F AL F+++
Sbjct: 38 SHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMR 97
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
SG P+ F S+ K+C + D R G SV G I + G + + N+L+ + K+ +D
Sbjct: 98 ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGID 157
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
R++F+ MP ++ VS++ +IA Y QSG
Sbjct: 158 -------------------------------SVRKVFELMPRKDVVSYNTVIAGYAQSGM 186
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E+A R+ R+M KP+ S VL + + G +H +V++ GI+ DV+I ++
Sbjct: 187 YEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSS 246
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
L+D+Y+K + ++E+++ +F ++ +R+
Sbjct: 247 LVDMYAK----------------------------------SARIEDSERVFSHLYRRDS 272
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
+SW+++++GY+++ +++ +F +M+ + P FSSV+ A A +A+L GK LHG
Sbjct: 273 ISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGY 332
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+++ GF ++F+ +AL D Y+K G+I+++R++FDRM +E+SWT ++ G A G+ E+
Sbjct: 333 VLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEA 392
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
++LFEEM++ + PN++ ++VL ACSH GLVD+ YFNSM +Y + HY V D
Sbjct: 393 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 452
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L R+G+L EA DFI+ M EP + W++LLS C +KN ++AE+ + ++ + E+
Sbjct: 453 LLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGA 512
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
YVL+ N+YAS GRW + +R + +KGLRK CSW+E++N+ H F +P
Sbjct: 513 YVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHP 567
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 184/380 (48%), Gaps = 39/380 (10%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
L S + A+ D N F V+ +C + ++++G + GM + + + AL++
Sbjct: 90 LASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM-DCDLYTGNALMN 148
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
+ K ++ FE P ++V+S+ I G+ Q+G +AL++ ++ S +KP+ T
Sbjct: 149 MYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFT 208
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
SS+ +E D G + G + + G + V + +SL+ + K ++ + VF +
Sbjct: 209 LSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLY 268
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+RD +SW ++ +++ G RYN EA RLFRQ
Sbjct: 269 RRDSISWNSLVAGYVQNG-------------------------RYN------EALRLFRQ 297
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M +P FS V+ A A L L G +H +VL+ G +++FI++AL+D+YSKCG
Sbjct: 298 MVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGN 357
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAI 422
+ R +FD + D VSW ++I G+ L+G EA LF+ M ++ N V++ A+
Sbjct: 358 IQAARKIFDRMNLHD---EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 414
Query: 423 ISGYLEHKQFDLVFAVFNEM 442
++ D + FN M
Sbjct: 415 LTACSHVGLVDEAWGYFNSM 434
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 181/392 (46%), Gaps = 44/392 (11%)
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F R + S ++++ ++ + L EA +F + ++W +I + A
Sbjct: 31 FIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRAL 90
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
F +M P+ + F VL + + LR G VH ++++G++ D++ NAL+++Y
Sbjct: 91 ASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMY 150
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SK R VF+ + KD VVS+N++I GY +G E+A
Sbjct: 151 SKLLGIDSVRKVFELMPRKD---VVSYNTVIAGYAQSGMYEDA----------------- 190
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ EM S P+ T SSVL + + KGK++HG +I+ G
Sbjct: 191 --------------LRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKG 236
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV++G++L D YAKS IE S RVF + ++ ISW +V G ++G E++ LF
Sbjct: 237 IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFR 296
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN-GRHY---TCVVDM 597
+M + P + SV+ AC+H + G + Y ++ GR+ + +VDM
Sbjct: 297 QMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHG-----YVLRGGFGRNIFIASALVDM 351
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
S+ G + A + M D +W +++ G
Sbjct: 352 YSKCGNIQAARKIFDRMNLH-DEVSWTAIIMG 382
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 203/476 (42%), Gaps = 69/476 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G ++HG +++ G+ + Y L+ MY ++ + + D+V +N +I Q
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQ 183
Query: 100 WGNLEEAQRLFDGM------PERNEVS--------------------------------- 120
G E+A R+ M P+ +S
Sbjct: 184 SGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYI 243
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
++L+ + K R+E+S F ++ ISW + + G+VQNG EAL+LF +++ + V
Sbjct: 244 GSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKV 303
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P V FSS+ ACA + LG + G + + GF +++ + ++L+ + K G + AR
Sbjct: 304 RPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARK 363
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGY 296
+FDRM D VSWT I+ G EA +F+EM + N+V++ ++ + G
Sbjct: 364 IFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 423
Query: 297 PEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
+EA+ F MT+ Y ++ V L L + + K+ +E + +
Sbjct: 424 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA---YDFISKMRVEPTGSVWS 480
Query: 356 ALIDLYSKCGETKDGRL---VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF---- 408
L+ S C K+ L V + I D ++ ++ M Y NG+ +E +L
Sbjct: 481 TLL---SSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVR 537
Query: 409 -DNMPKRNDVSW-------SAIISGYLEHKQFD----LVFAVFNEMLLSGEIPNKS 452
+ K+ SW +SG H D + AV +M G + + S
Sbjct: 538 KKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTS 593
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 203/638 (31%), Positives = 332/638 (52%), Gaps = 69/638 (10%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+ D + ++ +C+ +++ G + AQ + G VS T+L++ + K G +E+S
Sbjct: 217 ILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVS-TSLLNMYAKLGSIEDS 275
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
W F N +SW A I G NG EA LF+++ PN T S+ KA ++
Sbjct: 276 YWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKL 335
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
D +G K V C S + + + +V+ T ++
Sbjct: 336 VDVNMG-------------KEVQNCASELGI------------------EGNVLVGTALI 364
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVS--WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
D++ + G L +AR +FD V+ W+ MI+ Y+QSG +EA L+ QM + +
Sbjct: 365 DMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSD 424
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF-ISNALIDLYSKCGETKDGRLVF 374
+ V +A+A+ K+L+ G VH VLK G++ V ++NA+ D YSKCG
Sbjct: 425 LYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF-------- 476
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+E+ +++FD M +R+ VSW+ +++ Y + +
Sbjct: 477 --------------------------LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEE 510
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
A F M G PN+ TFSSVL + AS+ LE G+ +HG + K G + + +AL D
Sbjct: 511 ALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALID 570
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G I + +VFD++ + + +SWT ++ G A+ G ++++ LF ME + I N +T
Sbjct: 571 MYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVT 630
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L VLFACSH G+V++GL YF ME Y + P HY C++D+L R GRL +A +FI M
Sbjct: 631 LLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKM 690
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P EP+ W +LL GC+ + N ++ E A + + + E+ A YVLLSN Y G + D +
Sbjct: 691 PMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGL 750
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++R +M ++G++K G SW+ V+ +VH F+ +P+
Sbjct: 751 SLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQ 788
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 293/493 (59%), Gaps = 11/493 (2%)
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
F EK N ++ ++ G V+ AR +F+ + DV+SW ++ +++ G + EAR
Sbjct: 29 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 88
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+FD MP R+ VSW++M++ Y + G EA RLF P F+ +A+ S
Sbjct: 89 ELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF------DAAPVRDVFT--WTAVVSGY 140
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
A + V E++ NA++ Y + + + +F+ + ++VA SWN+
Sbjct: 141 AQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA---SWNT 197
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
M+ GY G +EEAK +FD MP+++ VSW+A+++ Y + + +F EM GE N
Sbjct: 198 MLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVN 257
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
+S F+ VL A +A+LE G LHG++I+ G+ F+G AL Y K G++E +R F+
Sbjct: 258 RSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFE 317
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
M +++ +SW M+ G A G+ KE++ +F+ M TS P+++T++ VL ACSHSGLV+K
Sbjct: 318 EMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEK 377
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G+ YF SM + + HYTC++D+L R+GRL+EA D + MPFEPDS W +LL
Sbjct: 378 GISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGAS 437
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
+ ++N ++ A + +++L E+ YVLLSNIYAS+G+W DA +R +M E+G++K G
Sbjct: 438 RIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPG 497
Query: 691 CSWVEVRNQVHFF 703
SW+EV+N+VH F
Sbjct: 498 FSWIEVQNKVHTF 510
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 255/531 (48%), Gaps = 86/531 (16%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
++D + N++I A HG H K+ +L Y+ + + EA +
Sbjct: 3 VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 62
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+D++ N +++ +QWG + EA+ LFD MP R+ VSW ++SG+ + G + E+ F
Sbjct: 63 RTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF 122
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++V +WTA + G+ QNG EA ++F + E N V++
Sbjct: 123 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSW-------------- 164
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
N+++ ++ +D A+ +F+ M R+V SW +L +
Sbjct: 165 ---------------------NAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 203
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L EA+ +FD MP+++ VSW+ M+A Y+Q G EE +LF +M R N S F+
Sbjct: 204 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC 263
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLS A + AL GM +H +++ G F+ NAL+ +Y KCG +D R F+ + E+D
Sbjct: 264 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 323
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAII-----SGYLE---- 428
VVSWN+MI GY +G +EA E+FD M K +D++ ++ SG +E
Sbjct: 324 ---VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 380
Query: 429 -----HKQFDLV-----FAVFNEML-LSGEI-------------PNKSTFSSVLCASASV 464
H F + + ++L +G + P+ + + ++L AS
Sbjct: 381 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 440
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+ E G+ KI +L P + + L++ YA SG +R++ M ++
Sbjct: 441 RNPELGRSAAEKIFELE-PENAGMYVLLSNIYASSGKWRDARKMRVMMEER 490
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 66/182 (36%), Gaps = 62/182 (34%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+L + G LHG LI+ G ++ LL MY
Sbjct: 263 CVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF------------------ 304
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+ GN+E+A+ F+ M ER+ VSW +I+G+ +H
Sbjct: 305 -------------KCGNMEDARNAFEEMEERDVVSWNTMIAGYARH-------------- 337
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
GF EAL++F + + KP+++T + AC+ G+S
Sbjct: 338 -----------------GFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 380
Query: 206 VF 207
F
Sbjct: 381 YF 382
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 333/608 (54%), Gaps = 5/608 (0%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ N +IN ++ G L A+ LFD + VS ++SG++K ++E + F + P +
Sbjct: 98 ILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERG 157
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+S+T I G QN EA+++F + +GV PNEVT +S+ AC+ I +
Sbjct: 158 CVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHA 217
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L+ K F V + +L+ + + + +F+ M R+ VSW V+L +++ G + +
Sbjct: 218 LVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQ 277
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +F+ +PER+ SW++MI + Q +A L+ M + PN +LSA
Sbjct: 278 ARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQ 337
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
++ G H+ ++K G FI +I Y+ C L + D +H+ S
Sbjct: 338 SVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQM---SDKSHLTSS 394
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N MI G+ NG +++A+++FD MP+++ SWS +ISGY +++ D+ +F+ M+ S
Sbjct: 395 NVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVE 454
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN+ T SV A A++ L +G+ H + P + L A+ D YAK G I+++ V
Sbjct: 455 PNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDV 514
Query: 509 FDRMPDKNEI--SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
F ++ DK W ++ GLA G+A S+ +F +++ SI N +T L VL AC H+G
Sbjct: 515 FRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAG 574
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LV+ G +YF SM+ + ++PN +HY C+VD+L R GRL EAE+ + +MP + D W +L
Sbjct: 575 LVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTL 634
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L+ +T+ +I ERA +NL +L H G VLLSN+YA AG W DA VR+ + + +
Sbjct: 635 LASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMI 694
Query: 687 KSGGCSWV 694
+S G S V
Sbjct: 695 RSPGYSGV 702
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 242/497 (48%), Gaps = 36/497 (7%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E++ S K CA + G + ++ K GF + + NSLI + +K G + AR +FD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
D VS +++ ++++ L AR++F +MPER VS++ MI Q+ EA +
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F+ M PN + V+SA + + + + +HA V+K+ V IS L+ +Y
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
KD + +F+ E V + VSWN M+ GY +G +++A+ELF+ +P+R+ SW+ +I
Sbjct: 241 FSSLKDTKRLFN---EMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMI 297
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
G+++ K+ +++ M S PN+ +L A S+E+G+ H I+K GF
Sbjct: 298 DGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFV 357
Query: 484 YDVFLGTALTDTYA-------------------------------KSGDIESSRRVFDRM 512
F+ + YA K+G I+ +R++FD M
Sbjct: 358 CFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMM 417
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
P+K+ SW+ M+ G A++ +++LF M + + PNE+T++SV A + G + +G
Sbjct: 418 PEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEG- 476
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS-NAWASLLSGCK 631
++ + I N ++DM ++ G + A D + + + + W +++ G
Sbjct: 477 RWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLA 536
Query: 632 TYKNEQIAERAVKNLWK 648
+ + ++ NL +
Sbjct: 537 MHGHANLSLEIFSNLQR 553
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 185/355 (52%), Gaps = 6/355 (1%)
Query: 76 NEIVKDLNGFDLV-VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ +V L+ F LV + +++ + +L++ +RLF+ MP RN VSW ++ G++K G V
Sbjct: 216 HALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLV 275
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+++ FER P ++V SW I GFVQ +AL L+ + +S + PNEV + AC
Sbjct: 276 DQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSAC 335
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ G LI K GF + ++I+ +DLA + +K + S
Sbjct: 336 GQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSN 395
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
V++ F + G + +AR+IFD MPE++ SWS MI+ Y Q+ P+ A LF M +P
Sbjct: 396 VMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEP 455
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N V SA+A+L L G H +V I + +S A+ID+Y+KCG VF
Sbjct: 456 NEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVF 515
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
I +K + V WN++I G ++G + E+F N+ +R N +++ ++S
Sbjct: 516 RQIKDK-TSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSA 569
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 206/614 (33%), Positives = 327/614 (53%), Gaps = 70/614 (11%)
Query: 103 LEEAQRLFDGMPE---RNEV-SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
LE+ +R+ M E E+ TAL+S + K G +E+++ F +NV+SWTA I G
Sbjct: 322 LEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
F Q+G EA F K++ESG++PN VTF SI AC+ + + G + I KAG+
Sbjct: 382 FAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGY--- 438
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
IT DR+ T +L ++ + G L +AR +F+ + +
Sbjct: 439 -------IT--------------DDRVR-------TALLSMYAKCGSLMDARNVFERISK 470
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+N V+W+ MI Y Q + A F+ + + KP++S F+ +L+ S AL G V
Sbjct: 471 QNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWV 530
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
+ +++ G E D+ I NAL+ ++ CG+
Sbjct: 531 QSLIIRAGFESDLHIRNALVSMFVNCGD-------------------------------- 558
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
+ A LF++MP+R+ VSW+ II+G+++H + F F M SG P++ TF+ +L
Sbjct: 559 --LMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLL 616
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A AS +L +G+ LH I + DV +GT L Y K G I+ + VF +P KN
Sbjct: 617 NACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVY 676
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SWT M+ G A+ G KE++ LF +M++ + P+ +T + L AC+H+GL+ +GL +F SM
Sbjct: 677 SWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM 736
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ +NI+P HY C+VD+ R+G L EA +FIN M +PDS W +LL C+ + + ++
Sbjct: 737 KD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVEL 795
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
AE+ + +L YV+LSNIYA+AG W + +RK+M ++G+ K G SW+EV
Sbjct: 796 AEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDG 855
Query: 699 QVHFFFQKTDHNPK 712
+VH F +P+
Sbjct: 856 RVHIFCSDDKTHPQ 869
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 267/555 (48%), Gaps = 71/555 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFERN 144
++ ++ I+ NL + +R+ + + + + W LIS + K G + F+
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++V SW + G+VQ+ EA +L ++++ GVKP++ TF + ACA+ + G
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+F LI AG++ + V +LI + +K G VD A VF+ + +RD+++WT ++
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMI------- 278
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+AR+ Q ++A LF+ M +P+ F +L
Sbjct: 279 ---------------------TGLARHRQF---KQACNLFQVMEEEGVQPDKVAFVSLLK 314
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A +AL G VHA + ++G++ ++++ AL+ +Y+KCG +D VF+ + ++
Sbjct: 315 ACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRN--- 371
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VVSW +MI G+ +G+MEEA F FN+M+
Sbjct: 372 VVSWTAMIAGFAQHGRMEEA-------------------------------FLFFNKMIE 400
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
SG PN+ TF S+L A + ++L++G+ +H +IIK G+ D + TAL YAK G +
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMD 460
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R VF+R+ +N ++W M+ + ++ F+ + K I P+ T S+L C
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
++ G K+ S+ + + +V M G L A + N MP E D +W
Sbjct: 521 PDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWN 578
Query: 625 SLLSGCKTYKNEQIA 639
++++G + Q A
Sbjct: 579 TIIAGFVQHGENQFA 593
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 232/473 (49%), Gaps = 52/473 (10%)
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRME----KRDVVSWTVILDVFIEMGDLGEARRIF 273
H +SL+ L +K + + + ++ + D+ W +++ ++ + G+ A++IF
Sbjct: 103 HRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIF 162
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
DEMP+++ SW++++ Y Q EEAFRL QM + KP+ F +L+A A K +
Sbjct: 163 DEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVD 222
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G + + +L G + D+F+ ALI+++ KCG D VF+++ +D +++W SMI
Sbjct: 223 KGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRD---LITWTSMI- 278
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
+G H+QF +F M G P+K
Sbjct: 279 ------------------------------TGLARHRQFKQACNLFQVMEEEGVQPDKVA 308
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
F S+L A +LE+GK +H ++ ++G ++++GTAL Y K G +E + VF+ +
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+N +SWT M+ G A+ G +E+ F +M ++ I PN +T +S+L ACS + +G +
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ + I + R T ++ M ++ G L +A + + + + AW ++++ Y
Sbjct: 429 IHDRIIKAGYIT-DDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITA---Y 483
Query: 634 KNEQIAERAVKNLWKLAEE----HPAGYVLLSNIYASA-----GRWIDAMNVR 677
+ + AV L +E + + + N+ S G+W+ ++ +R
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIR 536
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 204/446 (45%), Gaps = 73/446 (16%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
+LF + E + LLK + QG+ +H + + G+ E Y+ T LL MY
Sbjct: 292 NLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMY 351
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSW- 121
+A E+ + G ++V MI Q G +EEA F+ M E N V++
Sbjct: 352 TKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFM 411
Query: 122 ----------------------------------TALISGFMKHGRVEESMWYFERNPFQ 147
TAL+S + K G + ++ FER Q
Sbjct: 412 SILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQ 471
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV++W A I +VQ+ A+ F LL+ G+KP+ TF+SI C + LG V
Sbjct: 472 NVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQ 531
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
LI +AGFE + + N+L+++ + G++ A ++F+ M +RD+VSW I
Sbjct: 532 SLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTI----------- 580
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
IA + Q G + AF F+ M KP+ F+ +L+A A
Sbjct: 581 --------------------IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACA 620
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
S +AL G +HA + + ++ DV + LI +Y+KCG D LVF ++ +K+ V S
Sbjct: 621 SPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKN---VYS 677
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPK 413
W SMI GY +G+ +EA ELF M +
Sbjct: 678 WTSMITGYAQHGRGKEALELFCQMQQ 703
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 207/452 (45%), Gaps = 90/452 (19%)
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+N + + R +++G EA + + + + +S +L K L G +
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H H+ I+ D+F+ WN +I Y
Sbjct: 127 HNHIKFSKIQPDIFM----------------------------------WNMLISMYAKC 152
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G AK++FD MP ++ SW+ ++ GY++H++++ F + +M+ G P+K TF +L
Sbjct: 153 GNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYML 212
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A +++KG +L I+ G+ D+F+GTAL + + K G ++ + +VF+ +P ++ I
Sbjct: 213 NACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLI 272
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
+WT M+ GLA K++ NLF+ ME+ + P+++ +S+L AC+H +++G + M
Sbjct: 273 TWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARM 332
Query: 579 E----------------------------PIYNIKPNGRH---YTCVVDMLSRSGRLSEA 607
+ ++N+ GR+ +T ++ ++ GR+ EA
Sbjct: 333 KEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL-VKGRNVVSWTAMIAGFAQHGRMEEA 391
Query: 608 EDFINSM---PFEPDSNAWASLLSGCKT----YKNEQIAERAVKNLWKLAEEHPAGYVL- 659
F N M EP+ + S+L C + QI +R +K AGY+
Sbjct: 392 FLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIK----------AGYITD 441
Query: 660 ------LSNIYASAGRWIDAMNVRKLMTEKGL 685
L ++YA G +DA NV + ++++ +
Sbjct: 442 DRVRTALLSMYAKCGSLMDARNVFERISKQNV 473
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 221/706 (31%), Positives = 354/706 (50%), Gaps = 106/706 (15%)
Query: 47 LIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL------------------------ 82
+IK G++ E T+L+ ++ EA + + +
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDA 159
Query: 83 ---------NGFDLVVHN-------CMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
+G VV+N C NA+++ G Q + +G N + T +++
Sbjct: 160 VSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFAS-NVFAMTGVVN 218
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
+ K VEE+ F+R P ++++ W I G+ QNGF AL+L L++ E G +P+ +T
Sbjct: 219 MYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSIT 278
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
SI A A++ R+G S+ G +AGFE V+V +L+ + K G V AR +FDRM
Sbjct: 279 IVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMT 338
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ VVSW ++D +++ GD G A IF +M + +
Sbjct: 339 GKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQV------------------------E 374
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
MT N + L A A L + G VH + ++ + DV + N+LI +YSKC
Sbjct: 375 MT------NVTVMG-ALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKR 427
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+F+++ K +VSWN+MI GY NG++ EA + F M +N
Sbjct: 428 VDIAAEIFENLQHKT---LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIK--------- 475
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
P+ T SV+ A A ++ L + K +HG +I+ +V
Sbjct: 476 ----------------------PDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNV 513
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+ TAL D YAK G + ++R++FD M +++ +W M+ G G K ++ LFE+M+K
Sbjct: 514 FVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKE 573
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PNE+T L VL ACSHSGLV++G +YF SM+ Y ++P HY +VD+L R+ RL+E
Sbjct: 574 VIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNE 633
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A DFI MP EP + + ++L C+ +KN ++ E+A ++ L + +VLL+NIYA+
Sbjct: 634 AWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYAT 693
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A W VR M +KG++K+ G S VE++N+VH F+ T +P+
Sbjct: 694 ASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQ 739
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 194/430 (45%), Gaps = 77/430 (17%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +H LI G + T ++ MY R EA ++ + DLV N +I+
Sbjct: 193 KGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYA 252
Query: 99 QWG-----------NLEEAQR-----LFDGMPERNEVS---------------------- 120
Q G EE +R + +P +V
Sbjct: 253 QNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVN 312
Query: 121 -WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
TAL+ + K G V + F+R + V+SW + I G+VQNG A+++F K+++
Sbjct: 313 VSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQ 372
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V+ VT ACA++ D G V L+ + VSV NSLI++ K VD+A
Sbjct: 373 VEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAA 432
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+F+ ++ + +VSW + MI Y Q+G E
Sbjct: 433 EIFENLQHKTLVSW-------------------------------NAMILGYAQNGRINE 461
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A F +M + KP++ V+ ALA L L +H V++ ++K+VF++ AL+D
Sbjct: 462 AIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVD 521
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----N 415
+Y+KCG R +FD + E+ HV +WN+MI GYG +G + A ELF+ M K N
Sbjct: 522 MYAKCGAVHTARKLFDMMDER---HVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPN 578
Query: 416 DVSWSAIISG 425
+V++ ++S
Sbjct: 579 EVTFLCVLSA 588
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 166/400 (41%), Gaps = 65/400 (16%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G D+ V N +I+ + ++ A +F+ + + VSW A+I G+ ++GR+ E++ YF +
Sbjct: 409 GSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCK 468
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
QN +KP+ T S+ A AE++
Sbjct: 469 MQLQN-------------------------------IKPDSFTMVSVIPALAELSVLPQA 497
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ GL+ + +K+V V +L+ + K G V AR +FD M++R V +W ++D +
Sbjct: 498 KWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTH 557
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSC 318
G A +F++M + NEV++ +++ + SG EE F+ F M + Y +P
Sbjct: 558 GLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDH 617
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL-----IDLYSKCGETKDGRLV 373
+ ++ L L + K+ IE + + A+ I + GE R +
Sbjct: 618 YGAMVDLLGRANRLNEAWDF---IQKMPIEPAISVFGAMLGACRIHKNVELGEKAANR-I 673
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR---NDVSWSAI-------- 422
FD + HV+ N Y ++ + M K+ WS +
Sbjct: 674 FDLDPDDGGYHVLLANI----YATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHT 729
Query: 423 -ISGYLEHKQFDLVFAVF----NEMLLSGEIPNKSTFSSV 457
SG H Q ++A N + +G +P+ ++ V
Sbjct: 730 FYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSVHDV 769
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 103/265 (38%), Gaps = 74/265 (27%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + ++ + +++ Q + +HG +I+T + K ++ T L+ MY
Sbjct: 480 TMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMY---------------- 523
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G + A++LFD M ER+ +W A+I G+ H
Sbjct: 524 ---------------AKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTH----------- 557
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
G AL+LF K+ + +KPNEVTF + AC+
Sbjct: 558 --------------------GLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEE 597
Query: 203 GLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G FG + K G E + +++ L +G + +D ++K + + +
Sbjct: 598 GFQYFGSMKKDYGLEPAMDHYGAMVDL---LGRANRLNEAWDFIQKMPIEPAISVFGAML 654
Query: 262 ------EMGDLGE--ARRIFDEMPE 278
+ +LGE A RIFD P+
Sbjct: 655 GACRIHKNVELGEKAANRIFDLDPD 679
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 198/599 (33%), Positives = 335/599 (55%), Gaps = 15/599 (2%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI+ + + ++ + P + S+++ I + +++ +F ++ G+ P+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++ K CAE++ F++G + + +G + V S+ + ++ G + AR VFD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEE 299
RM +DVV+ + +L + G L E RI EM E N VSW+ +++ +N+SGY +E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A +F+++ F P+ S VL ++ + L G +H +V+K G+ KD + +A+ID
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 360 LYSKCGETKDGRLVFDS--IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR--- 414
+Y K G +F+ ++E V N+ I G NG +++A E+F+ ++
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVC-----NAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 415 -NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
N VSW++II+G ++ + +F EM ++G PN T S+L A ++A+L G+
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
HG +++ +V +G+AL D YAK G I S+ VF+ MP KN + W ++ G + G A
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
KE +++FE + +T + P+ ++ S+L AC GL D+G KYF M Y IKP HY+C
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+V++L R+G+L EA D I MPFEPDS W +LL+ C+ N +AE A + L+ L E+
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
P YVLLSNIYA+ G W + ++R M GL+K+ GCSW++V+N+V+ +P+
Sbjct: 591 PGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 236/484 (48%), Gaps = 24/484 (4%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF--- 141
D V M + ++ G + +A+++FD M +++ V+ +AL+ + + G +EE +
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 142 ERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
E + + N++SW + GF ++G+ EA+ +F K+ G P++VT SS+ + +
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G + G + K G K V +++I + K G V S+F++ E + +
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 261 IEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
G + +A +F+ E+ N VSW+ +IA Q+G EA LFR+M KPN
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+L A ++ AL G H +++ + +V + +ALID+Y+KCG ++VF+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQF 432
+ K+ +V WNS++ G+ ++G+ +E +F+++ K + +S+++++S +
Sbjct: 449 MPTKN---LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505
Query: 433 DLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
D + F M G P +S ++ L++ DL I ++ F D + A
Sbjct: 506 DEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL---IKEMPFEPDSCVWGA 562
Query: 492 LTDTYAKSGDIE----SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
L ++ +++ ++ ++F P+ N ++ ++ A G E ++ +ME
Sbjct: 563 LLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 548 ITPN 551
+ N
Sbjct: 622 LKKN 625
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 162/345 (46%), Gaps = 49/345 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L + ++ GR +HG++IK G+ K++ + + ++ MY KS I+ N F+
Sbjct: 258 VLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY---GKSGHVYGIISLFNQFE 314
Query: 87 LV---VHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMW 139
++ V N I + G +++A +F+ E+ N VSWT++I+G
Sbjct: 315 MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG------------ 362
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
C QNG EAL+LF ++ +GVKPN VT S+ AC I
Sbjct: 363 -----------------CA--QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAA 403
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G S G + +V V ++LI + K G ++L++ VF+ M +++V W +++
Sbjct: 404 LGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNG 463
Query: 260 FIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKP 314
F G E IF+ + + + +S++ +++ Q G +E ++ F+ M+ Y KP
Sbjct: 464 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
+S +++ L L+ + + ++ E D + AL++
Sbjct: 524 RLEHYSCMVNLLGRAGKLQEAYDL---IKEMPFEPDSCVWGALLN 565
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALI + K GR+ S F P +N++ W + + GF +G + E + +F L+ + +K
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ ++F+S+ AC ++ G F ++ + G + + + ++ L + G++ A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 241 VFDRME-KRDVVSWTVILDV--FIEMGDLGE--ARRIFDEMPERNEVSWSVMIARYNQSG 295
+ M + D W +L+ DL E A ++F PE N ++ ++ Y G
Sbjct: 547 LIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAKG 605
Query: 296 YPEEAFRLFRQMTRYSFKPNTSC 318
E + +M K N C
Sbjct: 606 MWTEVDSIRNKMESLGLKKNPGC 628
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 80 KDLNGFDLVVH--------NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
+ +GF + VH + +I+ + G + +Q +F+ MP +N V W +L++GF H
Sbjct: 408 RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMH 467
Query: 132 GRVEESMWYFE---RNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVT 186
G+ +E M FE R + + IS+T+ + Q G + E K F + E G+KP
Sbjct: 468 GKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEH 527
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR-- 244
+S + + + LI + FE V +L+ VDLA ++
Sbjct: 528 YSCMVNLLGRAGKLQ---EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLF 584
Query: 245 -MEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+E + ++ ++ +++ G E I ++M
Sbjct: 585 HLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K H +I+K G D ++ L +Y+ + V +PD S++ ++ L
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
++ +SI +F M + P+ + ++ C+ G K + + + + +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG-KQIHCVSCVSGLDMDA 151
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSM 614
+ M R GR+ +A + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRM 177
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 198/599 (33%), Positives = 335/599 (55%), Gaps = 15/599 (2%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI+ + + ++ + P + S+++ I + +++ +F ++ G+ P+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++ K CAE++ F++G + + +G + V S+ + ++ G + AR VFD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEE 299
RM +DVV+ + +L + G L E RI EM E N VSW+ +++ +N+SGY +E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A +F+++ F P+ S VL ++ + L G +H +V+K G+ KD + +A+ID
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 360 LYSKCGETKDGRLVFDS--IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR--- 414
+Y K G +F+ ++E V N+ I G NG +++A E+F+ ++
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVC-----NAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 415 -NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
N VSW++II+G ++ + +F EM ++G PN T S+L A ++A+L G+
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
HG +++ +V +G+AL D YAK G I S+ VF+ MP KN + W ++ G + G A
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
KE +++FE + +T + P+ ++ S+L AC GL D+G KYF M Y IKP HY+C
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+V++L R+G+L EA D I MPFEPDS W +LL+ C+ N +AE A + L+ L E+
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
P YVLLSNIYA+ G W + ++R M GL+K+ GCSW++V+N+V+ +P+
Sbjct: 591 PGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/546 (23%), Positives = 260/546 (47%), Gaps = 28/546 (5%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL--LIMYLGSRKSLEANEIVKDLNG 84
L+ +T L Q + + G+ + ++ L + L + K + V ++G
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 85 FDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF- 141
D+ V M + ++ G + +A+++FD M +++ V+ +AL+ + + G +EE +
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 142 --ERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
E + + N++SW + GF ++G+ EA+ +F K+ G P++VT SS+ + +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+G + G + K G K V +++I + K G V S+F++ E + +
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 259 VFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
G + +A +F+ E+ N VSW+ +IA Q+G EA LFR+M KP
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N +L A ++ AL G H +++ + +V + +ALID+Y+KCG ++VF
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHK 430
+ + K+ +V WNS++ G+ ++G+ +E +F+++ K + +S+++++S +
Sbjct: 447 NMMPTKN---LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 431 QFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
D + F M G P +S ++ L++ DL I ++ F D +
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL---IKEMPFEPDSCVW 560
Query: 490 TALTDTYAKSGDIE----SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
AL ++ +++ ++ ++F P+ N ++ ++ A G E ++ +ME
Sbjct: 561 GALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAKGMWTEVDSIRNKMES 619
Query: 546 TSITPN 551
+ N
Sbjct: 620 LGLKKN 625
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALI + K GR+ S F P +N++ W + + GF +G + E + +F L+ + +K
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ ++F+S+ AC ++ G F ++ + G + + + ++ L + G++ A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 241 VFDRME-KRDVVSWTVILDV--FIEMGDLGE--ARRIFDEMPERNEVSWSVMIARYNQSG 295
+ M + D W +L+ DL E A ++F PE N ++ ++ Y G
Sbjct: 547 LIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAKG 605
Query: 296 YPEEAFRLFRQMTRYSFKPNTSC 318
E + +M K N C
Sbjct: 606 MWTEVDSIRNKMESLGLKKNPGC 628
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K H +I+K G D ++ L +Y+ + V +PD S++ ++ L
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
++ +SI +F M + P+ + ++ C+ G K + + + + +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG-KQIHCVSCVSGLDMDA 151
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSM 614
+ M R GR+ +A + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRM 177
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/638 (31%), Positives = 332/638 (52%), Gaps = 69/638 (10%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+ D + ++ +C+ +++ G + AQ + G VS T+L++ + K G +E+S
Sbjct: 163 ILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVS-TSLLNMYAKLGSIEDS 221
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
W F N +SW A I G NG EA LF+++ PN T S+ KA ++
Sbjct: 222 YWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKL 281
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
D +G K V C S + + + +V+ T ++
Sbjct: 282 VDVNMG-------------KEVQNCASELGI------------------EGNVLVGTALI 310
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVS--WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
D++ + G L +AR +FD V+ W+ MI+ Y+QSG +EA L+ QM + +
Sbjct: 311 DMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSD 370
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF-ISNALIDLYSKCGETKDGRLVF 374
+ V +A+A+ K+L+ G VH VLK G++ V ++NA+ D YSKCG
Sbjct: 371 LYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF-------- 422
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+E+ +++FD M +R+ VSW+ +++ Y + +
Sbjct: 423 --------------------------LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEE 456
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
A F M G PN+ TFSSVL + AS+ LE G+ +HG + K G + + +AL D
Sbjct: 457 ALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALID 516
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G I + +VFD++ + + +SWT ++ G A+ G ++++ LF ME + I N +T
Sbjct: 517 MYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVT 576
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L VLFACSH G+V++GL YF ME Y + P HY C++D+L R GRL +A +FI M
Sbjct: 577 LLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKM 636
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P EP+ W +LL GC+ + N ++ E A + + + E+ A YVLLSN Y G + D +
Sbjct: 637 PMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGL 696
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++R +M ++G++K G SW+ V+ +VH F+ +P+
Sbjct: 697 SLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQ 734
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 323/592 (54%), Gaps = 5/592 (0%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+ I K GR+ + F+ P ++ ++W A + + Q G +AL LF + + +
Sbjct: 9 TSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSR 68
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ TF++ ACA + + R G+ + + +G + + V NSLI + K AR V
Sbjct: 69 PDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+ M + VSW +L + G AR +FD MP++ E++W++MI+ Y Q G E
Sbjct: 129 FEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCL 188
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF++M S +P+ FS +++AL L+ G +H ++K G K V +SN+++ Y
Sbjct: 189 GLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFY 248
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SK G D VF+SI + VSWN+MI + G EA +F P++N VSW++
Sbjct: 249 SKLGCKDDVMKVFESI---GILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTS 305
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY + + + F +M+ + P+ TF +VL A +S+A+L GK +HG II G
Sbjct: 306 MITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYG 365
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F V +G L + YAK GDI+ S F + K+ +SW M+ GL G+A +++ L+E
Sbjct: 366 FHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYE 425
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM + + P+++T + +L CSHSGL++KG F SM +Y + H C+VD+L R
Sbjct: 426 EMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRG 485
Query: 602 GRLSEAEDFIN--SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
G L++A + ++ S +++ +LL C + ++ + L + YVL
Sbjct: 486 GYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVL 545
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LSN+Y +G+W +A VRK MT+ G++K GCSW+EVRN+V F +P
Sbjct: 546 LSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHP 597
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 207/425 (48%), Gaps = 35/425 (8%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V N +I+ + + A+R+F+ M NEVSW +L+ + G + + F+ P
Sbjct: 106 LPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPK 165
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ I+W I G+ Q G L LF K+ E ++P++ TFS++ A E+ + G +
Sbjct: 166 KVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMM 225
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G I K+G+ K V V NS+++ K+G D VF+ + VSW ++D +++GD
Sbjct: 226 HGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDT 285
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EA +F PE+N VSW+ MI Y ++G+ E+A F +M +P+ F VL A
Sbjct: 286 HEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHAC 345
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+SL L G +H ++ G V + N L+++Y+KCG+ + F I+ KD +V
Sbjct: 346 SSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKD---LV 402
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWN+M+ G G++G +A EL++ EM+ SG
Sbjct: 403 SWNAMLFGLGMHGHATQALELYE-------------------------------EMVASG 431
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESS 505
P+K TF +L + +EKG+ L ++ + G + + D + G + +
Sbjct: 432 MKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQA 491
Query: 506 RRVFD 510
R + D
Sbjct: 492 RELVD 496
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 180/385 (46%), Gaps = 65/385 (16%)
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
H+ S I K+G + AR +FD M +D V+W
Sbjct: 4 HLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAW------------------------ 39
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+ M+A Y+Q G ++A LF M + +P+ F+ LSA A L LR GM
Sbjct: 40 -------NAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMK 92
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA V+ G + + + N+LID+Y KC R VF+ E + + VSW S++ Y
Sbjct: 93 IHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFE---EMSIMNEVSWCSLLFAYTS 149
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+G + A+ +FD MPK+ +++W+ +ISGY + +L +F +M P++ TFS++
Sbjct: 150 SGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSAL 209
Query: 458 LCASASVASLEKGKDLHGKII-------------------KLGFPYDVF-----LG---- 489
+ A + G +HG II KLG DV +G
Sbjct: 210 VNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIGILTQ 269
Query: 490 ---TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
A+ D + K GD + VF P+KN +SWT M+ G A +G+ +++++ F +M +
Sbjct: 270 VSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMEN 329
Query: 547 SITPNELTILSVLFACSHSGLVDKG 571
I P++ T +VL ACS + G
Sbjct: 330 HIQPDDFTFGAVLHACSSLATLGHG 354
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 31/210 (14%)
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+H+ S I G++ A+ LFD MP ++ V+W+A+++ Y + +F+ M
Sbjct: 3 SHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHM 62
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK---- 498
++ P++ TF++ L A A + L +G +H +++ G + +G +L D Y K
Sbjct: 63 RIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSA 122
Query: 499 ---------------------------SGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
SG + +R VFD MP K EI+W +M+ G + G
Sbjct: 123 TSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCG 182
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFA 561
+ + LF++M + S+ P++ T +++ A
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNA 212
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+F T+ AK G I S+RR+FD MP K+ ++W M+ ++ G ++++ LF M
Sbjct: 5 LFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRI 64
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLK 573
+ P+ T + L AC+ G + +G+K
Sbjct: 65 ANSRPDRFTFTATLSACAGLGELRRGMK 92
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/593 (34%), Positives = 323/593 (54%), Gaps = 40/593 (6%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + G ++ +++ F++ P ++ +WT I G Q+GF +A+ ++ LL V+P+
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ S+ KACA D + + + GF K + + N+LI
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALI----------------- 119
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
D+F + + AR +FD+M ++ VSW+ M Y G + L
Sbjct: 120 --------------DMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILL 165
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR+M + N+ S +L A A ++ G VH +L+ +E +V++S+AL+++Y+
Sbjct: 166 FREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYAS 223
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSW 419
K RLVFDS+ +D+ VSWN M+ Y LN + E LF M K N SW
Sbjct: 224 SLGLKQARLVFDSMYHRDI---VSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASW 280
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+A ISG +++ Q +L + +M SG PN+ T S L ++ SL GK++HG + +
Sbjct: 281 NAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFR 340
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
F DV + TAL YAK GD+E SR VF+ MP K+ ++W M+ + G ES+ L
Sbjct: 341 HWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLIL 400
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F +M + + PN +T + VL CSHS L D+GL FNSM ++I P+ HY+C+VD+LS
Sbjct: 401 FNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLS 460
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+GRL EA DFI MP EP + AW +LL C+ YKN ++ A L+++ ++ YVL
Sbjct: 461 RAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVL 520
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
LSNI +A +W++A +RK+M +KGL K+ G SWV+V+N+V+ F N +
Sbjct: 521 LSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQ 573
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 193/390 (49%), Gaps = 18/390 (4%)
Query: 101 GNLEEAQRLFDGMPE----RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
G+L A+++ D + ++ V ALI F K V + F+ ++V+SWT+
Sbjct: 91 GDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMT 150
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
+V G + + LF ++ +G++ N +T SSI ACA+ +LG V G I + E
Sbjct: 151 YCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNEME 208
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+V V ++L+ + + AR VFD M RD+VSW V+L + + +F +M
Sbjct: 209 GNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQM 268
Query: 277 PER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
+ N+ SW+ I+ Q+G E A + +M KPN L +L++L
Sbjct: 269 RKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESL 328
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
R G +H +V + +DV I+ AL+ LY+KCG+ + R VF+++ KD VV+WN+MI
Sbjct: 329 RGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKD---VVAWNTMI 385
Query: 393 GGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++G+ E+ LF+ M + N V++ ++SG + D VFN M I
Sbjct: 386 MANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSI 445
Query: 449 -PNKSTFSSVLCASASVASLEKGKDLHGKI 477
P+ +S ++ + LE+ D K+
Sbjct: 446 TPDADHYSCMVDVLSRAGRLEEAYDFIRKM 475
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 40/297 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +HG +++ + Y+++ L+ MY S
Sbjct: 195 GREVHGFILRNEMEGNVYVSSALVNMYASSL----------------------------- 225
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ----NVISWTAA 155
L++A+ +FD M R+ VSW +++ + + E + F + + N SW AA
Sbjct: 226 --GLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAA 283
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I G +QNG AL + K+ +SG+KPN +T S C + R G + G +F+ F
Sbjct: 284 ISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWF 343
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ V++ +L+ L K G+++L+R VF+ M ++DVV+W ++ G GE+ +F++
Sbjct: 344 IEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNK 403
Query: 276 M----PERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALA 327
M E N V++ +++ + S +E +F M + +S P+ +S ++ L+
Sbjct: 404 MLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLS 460
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/573 (34%), Positives = 312/573 (54%), Gaps = 36/573 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIND 199
F++ P N+ +W I + + ++L +FL++L +S P++ TF + KA +E+ +
Sbjct: 92 FDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEE 151
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G + G++ K V + NSLI K GE
Sbjct: 152 LFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGE------------------------- 186
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
LG R+F +P R+ VSW+ MI + Q G PEEA LF++M + KPN
Sbjct: 187 ------LGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITM 240
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
VLSA A G VH+++ + I + + +SNA++D+Y+KCG +D + +FD + E
Sbjct: 241 VGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPE 300
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
KD+ VSW +M+ GY G+ + A+ +FD MP ++ +W+A+IS Y + + +F
Sbjct: 301 KDI---VSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELF 357
Query: 440 NEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+E+ LS P++ T S L A A + +++ G +H I K G + L T+L D Y K
Sbjct: 358 HELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCK 417
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
GD++ + VF + K+ W+ M+ GLA G+ K++I LF +M++ + PN +T ++
Sbjct: 418 CGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNI 477
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSH GLV++G +FN ME +Y + P +HY C+VD+L R+G L EA + I MP P
Sbjct: 478 LCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAP 537
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
++ W +LL C ++N +AE+A L +L + YVLLSNIYA AG+W +RK
Sbjct: 538 AASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRK 597
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LM + GL+K GCS +EV VH F + +P
Sbjct: 598 LMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 630
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 203/396 (51%), Gaps = 42/396 (10%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI + K G + F P ++V+SW + I FVQ G EAL+LF ++ VKP
Sbjct: 176 SLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKP 235
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N +T + ACA+ +DF G V I + + +++ N+++ + K G V+ A+ +F
Sbjct: 236 NGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLF 295
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D+M ++D+VSWT +L + ++G+ A+ IFD MP ++ +W+ +I+ Y Q G P+EA
Sbjct: 296 DKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALE 355
Query: 303 LFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF ++ + KP+ LSA A L A+ G +H ++ K G++ + ++ +LID+Y
Sbjct: 356 LFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMY 415
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG+ + +VF S+ KD V W++MI G ++G ++A LF M
Sbjct: 416 CKCGDLQKALMVFHSVERKD---VFVWSAMIAGLAMHGHGKDAIALFSKM---------- 462
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
Q D V PN TF+++LCA + V +E+G+ ++
Sbjct: 463 ---------QEDKV------------KPNAVTFTNILCACSHVGLVEEGRTFFN---QME 498
Query: 482 FPYDVFLG----TALTDTYAKSGDIESSRRVFDRMP 513
Y V G + D ++G +E + + ++MP
Sbjct: 499 LVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMP 534
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 183/397 (46%), Gaps = 69/397 (17%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK-PNTSCFSIVLS 324
L A+++FD++P N +W+ +I Y S P ++ +F +M S P+ F ++
Sbjct: 85 LDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIK 144
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + L+ L +G H V+K+ + DVFI N+LI Y+KCGE G VF +I +D
Sbjct: 145 AASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRD--- 201
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VVSWNSMI + G EEA ELF M +N
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQN----------------------------- 232
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
PN T VL A A + E G+ +H I + + L A+ D Y K G +E
Sbjct: 233 --VKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVED 290
Query: 505 SRRVFDRMPDKNEISWTVMVRGLA-------------------------------ESGYA 533
++R+FD+MP+K+ +SWT M+ G A + G
Sbjct: 291 AKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKP 350
Query: 534 KESINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
KE++ LF E++ + P+E+T++S L AC+ G +D G + + +K N T
Sbjct: 351 KEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIHVYIKKQGMKLNCHLTT 409
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++DM + G L +A +S+ D W+++++G
Sbjct: 410 SLIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAG 445
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 151/351 (43%), Gaps = 70/351 (19%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G L + N M++ + G++E+A+RLFD MPE++ VSWT ++ G+ K G + + F+
Sbjct: 269 GESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDA 328
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRL 202
P Q++ +W A I + Q G EAL+LF +L L KP+EVT S ACA++ L
Sbjct: 329 MPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDL 388
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + I K G + + + SLI + K G++ A VF +E++DV W
Sbjct: 389 GGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVW--------- 439
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
S MIA G+ ++A LF +M KPN F+ +
Sbjct: 440 ----------------------SAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNI 477
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS--IVEK 380
L A S G ++GR F+ +V
Sbjct: 478 LCAC-----------------------------------SHVGLVEEGRTFFNQMELVYG 502
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYLEHK 430
+ V + M+ G G +EEA EL + MP S W A++ H+
Sbjct: 503 VLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHE 553
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 143/282 (50%), Gaps = 6/282 (2%)
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVA-HVVSWNSMIGGYGLNG--QMEEAKELF 408
F ++ + L +C ETK + + ++ + S + +I L+ ++ A+++F
Sbjct: 33 FANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVF 92
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASL 467
D +P N +W+ +I Y +F ML S + P+K TF ++ A++ + L
Sbjct: 93 DQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEEL 152
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
GK HG +IK+ DVF+ +L YAK G++ RVF +P ++ +SW M+
Sbjct: 153 FTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAF 212
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ G +E++ LF+EME ++ PN +T++ VL AC+ + G ++ +S I +
Sbjct: 213 VQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG-RWVHSYIERNRIGES 271
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++DM ++ G + +A+ + MP E D +W ++L G
Sbjct: 272 LTLSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWTTMLVG 312
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/631 (33%), Positives = 339/631 (53%), Gaps = 66/631 (10%)
Query: 85 FDLVVHNCMINANIQW-GNLEEAQRLFDGMPERNEVSWTALISGFMK-HGRVEESMWYFE 142
F V+ C NAN W G + + G E + LI F+K G + + F+
Sbjct: 131 FAAVIRACS-NANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P +N+++WT I F Q G + +A+ LFL + SG P+ T+SS+ AC E+ L
Sbjct: 190 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLAL 249
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + + G V V SL+ + A+ D
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDM--------YAKCAAD------------------- 282
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSG-YPEEAFRLFRQMTRYSFKPNTSCFSI 321
G + ++R++F++MPE N +SW+ +I Y QSG +EA LF +M +PN FS
Sbjct: 283 -GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSS 341
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VL A +L +G V+++ +K+GI + N
Sbjct: 342 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN-------------------------- 375
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
S+I Y +G+ME+A++ FD + ++N VS++AI+ GY ++ + + F +FNE
Sbjct: 376 --------SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNE 427
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+ +G + TF+S+L +AS+ ++ KG+ +HG+++K G+ + + AL Y++ G+
Sbjct: 428 IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGN 487
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
IE++ +VF+ M D+N ISWT M+ G A+ G+A ++ +F +M +T PNE+T ++VL A
Sbjct: 488 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 547
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH G++ +G K+FNSM + I P HY C+VD+L RSG L EA +FINSMP D+
Sbjct: 548 CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADAL 607
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LL C+ + N ++ A + + + + PA Y+LLSN++ASAG+W D + +RK M
Sbjct: 608 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 667
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
E+ L K GCSW+EV N+VH F +P+
Sbjct: 668 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 698
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 199/424 (46%), Gaps = 89/424 (20%)
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G AF MT+ + P+ + +SI+L + + + G VH +++ G+E D +
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK- 413
N LI LYSKCG+T+ RL+F+ + K +VSW++M+ + N +A F +M +
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKR--DLVSWSAMVSCFANNSMEWQAIWTFLDMLEL 122
Query: 414 ---RNDVSWSAII---------------------SGYLE--------------------- 428
N+ ++A+I +GYLE
Sbjct: 123 GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLG 182
Query: 429 --HKQFDLV--------------FA----------VFNEMLLSGEIPNKSTFSSVLCASA 462
+K FD + FA +F +M LSG +P++ T+SSVL A
Sbjct: 183 SAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 242
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK---SGDIESSRRVFDRMPDKNEIS 519
+ L GK LH ++I+LG DV +G +L D YAK G ++ SR+VF++MP+ N +S
Sbjct: 243 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 302
Query: 520 WTVMVRGLAESGYA-KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
WT ++ +SG KE+I LF +M I PN + SVL AC + G + ++
Sbjct: 303 WTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS-- 360
Query: 579 EPIYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTY 633
Y +K CV + M +RSGR+ +A + + FE + ++ +++ G K
Sbjct: 361 ---YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNL 416
Query: 634 KNEQ 637
K+E+
Sbjct: 417 KSEE 420
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 182/403 (45%), Gaps = 96/403 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L+ G+ LH +I+ G+ + + L+ MY
Sbjct: 237 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYA------------------- 277
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
C + G++++++++F+ MPE N +SWTA+I+ +++ G ++
Sbjct: 278 ----KCAAD-----GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDK---------- 318
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
EA++LF K++ ++PN +FSS+ KAC ++D G V
Sbjct: 319 --------------------EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 358
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K G V NSLI++ + G ++ AR FD + ++++VS+ I+D
Sbjct: 359 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVD-------- 410
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
Y ++ EEAF LF ++ + F+ +LS
Sbjct: 411 -----------------------GYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 447
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
AS+ A+ G +H +LK G + + I NALI +YS+CG + VF+ + +++ V+
Sbjct: 448 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN---VI 504
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISG 425
SW SMI G+ +G A E+F M K N++++ A++S
Sbjct: 505 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 547
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 46/236 (19%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
SF+S ++ C L T G ++ + +K GI + L+ MY S + +A
Sbjct: 338 SFSSVLKACGNLSDPYT-------GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEA----------------------------- 106
+ L +LV +N +++ + EEA
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450
Query: 107 ----------QRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
RL G + N+ ALIS + + G +E + F +NVISWT+ I
Sbjct: 451 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 510
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
GF ++GF+ AL++F K+LE+G KPNE+T+ ++ AC+ + G F ++K
Sbjct: 511 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 566
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 333/608 (54%), Gaps = 5/608 (0%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ N +IN ++ G L A+ LFD + VS ++SG++K ++E + F + P +
Sbjct: 269 ILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERG 328
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+S+T I G QN EA+++F + +GV PNEVT +S+ AC+ I +
Sbjct: 329 CVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHA 388
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L+ K F V + +L+ + + + +F+ M R+ VSW V+L +++ G + +
Sbjct: 389 LVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQ 448
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +F+ +PER+ SW++MI + Q +A L+ M + PN +LSA
Sbjct: 449 ARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQ 508
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
++ G H+ ++K G FI +I Y+ C L + D +H+ S
Sbjct: 509 SVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQM---SDKSHLTSS 565
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N MI G+ NG +++A+++FD MP+++ SWS +ISGY +++ D+ +F+ M+ S
Sbjct: 566 NVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVE 625
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN+ T SV A A++ L +G+ H + P + L A+ D YAK G I+++ V
Sbjct: 626 PNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDV 685
Query: 509 FDRMPDKNEI--SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
F ++ DK W ++ GLA G+A S+ +F +++ SI N +T L VL AC H+G
Sbjct: 686 FRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAG 745
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LV+ G +YF SM+ + ++PN +HY C+VD+L R GRL EAE+ + +MP + D W +L
Sbjct: 746 LVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTL 805
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L+ +T+ +I ERA +NL +L H G VLLSN+YA AG W DA VR+ + + +
Sbjct: 806 LASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMI 865
Query: 687 KSGGCSWV 694
+S G S V
Sbjct: 866 RSPGYSGV 873
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 242/497 (48%), Gaps = 36/497 (7%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E++ S K CA + G + ++ K GF + + NSLI + +K G + AR +FD
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 291
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
D VS +++ ++++ L AR++F +MPER VS++ MI Q+ EA +
Sbjct: 292 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F+ M PN + V+SA + + + + +HA V+K+ V IS L+ +Y
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 411
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
KD + +F+ E V + VSWN M+ GY +G +++A+ELF+ +P+R+ SW+ +I
Sbjct: 412 FSSLKDTKRLFN---EMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMI 468
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
G+++ K+ +++ M S PN+ +L A S+E+G+ H I+K GF
Sbjct: 469 DGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFV 528
Query: 484 YDVFLGTALTDTYA-------------------------------KSGDIESSRRVFDRM 512
F+ + YA K+G I+ +R++FD M
Sbjct: 529 CFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMM 588
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
P+K+ SW+ M+ G A++ +++LF M + + PNE+T++SV A + G + +G
Sbjct: 589 PEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEG- 647
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS-NAWASLLSGCK 631
++ + I N ++DM ++ G + A D + + + + W +++ G
Sbjct: 648 RWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLA 707
Query: 632 TYKNEQIAERAVKNLWK 648
+ + ++ NL +
Sbjct: 708 MHGHANLSLEIFSNLQR 724
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 185/355 (52%), Gaps = 6/355 (1%)
Query: 76 NEIVKDLNGFDLV-VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ +V L+ F LV + +++ + +L++ +RLF+ MP RN VSW ++ G++K G V
Sbjct: 387 HALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLV 446
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+++ FER P ++V SW I GFVQ +AL L+ + +S + PNEV + AC
Sbjct: 447 DQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSAC 506
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ G LI K GF + ++I+ +DLA + +K + S
Sbjct: 507 GQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSN 566
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
V++ F + G + +AR+IFD MPE++ SWS MI+ Y Q+ P+ A LF M +P
Sbjct: 567 VMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEP 626
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N V SA+A+L L G H +V I + +S A+ID+Y+KCG VF
Sbjct: 627 NEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVF 686
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
I +K + V WN++I G ++G + E+F N+ +R N +++ ++S
Sbjct: 687 RQIKDK-TSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSA 740
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/631 (33%), Positives = 339/631 (53%), Gaps = 66/631 (10%)
Query: 85 FDLVVHNCMINANIQW-GNLEEAQRLFDGMPERNEVSWTALISGFMK-HGRVEESMWYFE 142
F V+ C NAN W G + + G E + LI F+K G + + F+
Sbjct: 149 FAAVIRACS-NANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P +N+++WT I F Q G + +A+ LFL + SG P+ T+SS+ AC E+ L
Sbjct: 208 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLAL 267
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + + G V V SL+ + A+ D
Sbjct: 268 GKQLHSRVIRLGLALDVCVGCSLVDM--------YAKCAAD------------------- 300
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSG-YPEEAFRLFRQMTRYSFKPNTSCFSI 321
G + ++R++F++MPE N +SW+ +I Y QSG +EA LF +M +PN FS
Sbjct: 301 -GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSS 359
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VL A +L +G V+++ +K+GI + N
Sbjct: 360 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN-------------------------- 393
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
S+I Y +G+ME+A++ FD + ++N VS++AI+ GY ++ + + F +FNE
Sbjct: 394 --------SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNE 445
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+ +G + TF+S+L +AS+ ++ KG+ +HG+++K G+ + + AL Y++ G+
Sbjct: 446 IADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGN 505
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
IE++ +VF+ M D+N ISWT M+ G A+ G+A ++ +F +M +T PNE+T ++VL A
Sbjct: 506 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 565
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH G++ +G K+FNSM + I P HY C+VD+L RSG L EA +FINSMP D+
Sbjct: 566 CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADAL 625
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LL C+ + N ++ A + + + + PA Y+LLSN++ASAG+W D + +RK M
Sbjct: 626 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 685
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
E+ L K GCSW+EV N+VH F +P+
Sbjct: 686 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 716
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 199/424 (46%), Gaps = 89/424 (20%)
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G AF MT+ + P+ + +SI+L + + + G VH +++ G+E D +
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK- 413
N LI LYSKCG+T+ RL+F+ + K +VSW++M+ + N +A F +M +
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKR--DLVSWSAMVSCFANNSMEWQAIWTFLDMLEL 140
Query: 414 ---RNDVSWSAII---------------------SGYLE--------------------- 428
N+ ++A+I +GYLE
Sbjct: 141 GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLG 200
Query: 429 --HKQFDLV--------------FA----------VFNEMLLSGEIPNKSTFSSVLCASA 462
+K FD + FA +F +M LSG +P++ T+SSVL A
Sbjct: 201 SAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 260
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK---SGDIESSRRVFDRMPDKNEIS 519
+ L GK LH ++I+LG DV +G +L D YAK G ++ SR+VF++MP+ N +S
Sbjct: 261 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 320
Query: 520 WTVMVRGLAESGYA-KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
WT ++ +SG KE+I LF +M I PN + SVL AC + G + ++
Sbjct: 321 WTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS-- 378
Query: 579 EPIYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTY 633
Y +K CV + M +RSGR+ +A + + FE + ++ +++ G K
Sbjct: 379 ---YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNL 434
Query: 634 KNEQ 637
K+E+
Sbjct: 435 KSEE 438
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 182/403 (45%), Gaps = 96/403 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L+ G+ LH +I+ G+ + + L+ MY
Sbjct: 255 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYA------------------- 295
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
C + G++++++++F+ MPE N +SWTA+I+ +++ G ++
Sbjct: 296 ----KCAAD-----GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDK---------- 336
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
EA++LF K++ ++PN +FSS+ KAC ++D G V
Sbjct: 337 --------------------EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 376
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K G V NSLI++ + G ++ AR FD + ++++VS+ I+D
Sbjct: 377 YSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVD-------- 428
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
Y ++ EEAF LF ++ + F+ +LS
Sbjct: 429 -----------------------GYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 465
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
AS+ A+ G +H +LK G + + I NALI +YS+CG + VF+ + +++ V+
Sbjct: 466 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN---VI 522
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISG 425
SW SMI G+ +G A E+F M K N++++ A++S
Sbjct: 523 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 565
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 46/236 (19%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
SF+S ++ C L T G ++ + +K GI + L+ MY S + +A
Sbjct: 356 SFSSVLKACGNLSDPYT-------GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEA----------------------------- 106
+ L +LV +N +++ + EEA
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468
Query: 107 ----------QRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
RL G + N+ ALIS + + G +E + F +NVISWT+ I
Sbjct: 469 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 528
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
GF ++GF+ AL++F K+LE+G KPNE+T+ ++ AC+ + G F ++K
Sbjct: 529 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 584
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 224/729 (30%), Positives = 345/729 (47%), Gaps = 104/729 (14%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L +L ++ + G+ +H H+ + G + + L+ MY +A E+ +
Sbjct: 332 TYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTM 391
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PER-----------NEVSWT--- 122
DL+ N +I + + EA RL+ M P R N ++
Sbjct: 392 PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK 451
Query: 123 -------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
AL++ + + G + E+ FE ++VISW + I G Q+G
Sbjct: 452 MIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHG 511
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
A KLF ++ ++P+ +TF+S+ C LG + G I ++G + V++ N
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+LI + +I G L +AR +F + R+ +S
Sbjct: 572 ALINM-------------------------------YIRCGSLQDARNVFHSLQHRDVMS 600
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W+ MI G +A LF QM F+P S FS +L S L G V A++L
Sbjct: 601 WTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYIL 660
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
G E D + NALI YSK +G M +
Sbjct: 661 NSGYELDTGVGNALISAYSK----------------------------------SGSMTD 686
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A+E+FD MP R+ VSW+ II+GY ++ +M +PNK +F S+L A +S
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
++LE+GK +H +I+K DV +G AL YAK G ++ VFD + +KN ++W M
Sbjct: 747 FSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAM 806
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ A+ G A +++ F MEK I P+ T S+L AC+H+GLV +G + F+SME Y
Sbjct: 807 INAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYG 866
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ P HY C+V +L R+ R EAE IN MPF PD+ W +LL C+ + N +AE A
Sbjct: 867 VLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAA 926
Query: 644 KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
N KL +PA Y+LLSN+YA+AGRW D +R++M +G+RK G SW+EV N +H F
Sbjct: 927 NNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEF 986
Query: 704 FQKTDHNPK 712
+P+
Sbjct: 987 IAADRSHPE 995
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/656 (24%), Positives = 291/656 (44%), Gaps = 117/656 (17%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H +IK G ++ + LL MY A ++ ++ D+V +N M+ Q
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 100 WGNLEEAQRLFDGMPER----NEVSW---------------------------------- 121
++E LF M ++V++
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 122 -TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TAL++ ++ G V+ + F+ ++V+ + A I Q+G + EA + + ++ GV
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
N T+ SI AC+ G + I + G V + N+LI++
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM------------ 374
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ GDL +AR +F MP+R+ +SW+ +IA Y + EA
Sbjct: 375 -------------------YARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEA 415
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
RL++QM KP F +LSA A+ A G +H +L+ GI+ + ++NAL+++
Sbjct: 416 MRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNM 475
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y +C G + EA+ +F+ R+ +SW+
Sbjct: 476 YRRC----------------------------------GSLMEAQNVFEGTQARDVISWN 501
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
++I+G+ +H ++ + +F EM P+ TF+SVL + +LE GK +HG+I +
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G DV LG AL + Y + G ++ +R VF + ++ +SWT M+ G A+ G ++I LF
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKY----FNSMEPIYNIKPNGRHYTCVVD 596
+M+ P + T S+L C+ S +D+G K NS + N ++
Sbjct: 622 WQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNA-----LIS 676
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
S+SG +++A + + MP D +W +++G Y + + AV+ +++ E+
Sbjct: 677 AYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAG---YAQNGLGQTAVEFAYQMQEQ 728
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/642 (26%), Positives = 280/642 (43%), Gaps = 127/642 (19%)
Query: 103 LEEAQRLFDGMPERNEVSWTA--------LISGFMKHGRVEESMWYFERNPFQNVISWTA 154
L EA+R+ M E +W LI+ ++K V ++ F+ P ++VISW +
Sbjct: 43 LPEAKRIHAQMVE----AWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNS 98
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I + Q GF +A +LF ++ +G PN++T+ SI AC + G + I KAG
Sbjct: 99 LISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG 158
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+++ V NSL+++ K G++ AR VF + RDVVS
Sbjct: 159 YQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVS---------------------- 196
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
++ M+ Y Q Y +E LF QM+ P+ + +L A + L
Sbjct: 197 ---------YNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE 247
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +H ++ G+ D+ + AL+ + +CG+ + F ++D VV +N++I
Sbjct: 248 GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRD---VVVYNALIAA 304
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
+G EA E + M R+D G N++T+
Sbjct: 305 LAQHGHNVEAFEQYYRM--RSD-----------------------------GVALNRTTY 333
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
S+L A ++ +LE GK +H I + G DV +G AL YA+ GD+ +R +F MP
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ ISW ++ G A E++ L+++M+ + P +T L +L AC++S G K
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG-KM 452
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI-----------NSM--------- 614
+ IK NG +++M R G L EA++ NSM
Sbjct: 453 IHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGS 512
Query: 615 --------------PFEPDSNAWASLLSGCKTYK----NEQIAERAVKNLWKLAEEHPAG 656
EPD+ +AS+LSGCK + +QI R ++ +L + G
Sbjct: 513 YETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQL--DVNLG 570
Query: 657 YVLLSNIYASAGRWIDAMNV------RKLMTEKGLRKSGGCS 692
L+ N+Y G DA NV R +M+ + GGC+
Sbjct: 571 NALI-NMYIRCGSLQDARNVFHSLQHRDVMSWTAM--IGGCA 609
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 140/279 (50%), Gaps = 35/279 (12%)
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ L +HA +++ + D+F+SN LI++Y KC R V D
Sbjct: 41 RLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKC------RSVLD-------------- 80
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
A ++F MP+R+ +SW+++IS Y + F +F EM +G IP
Sbjct: 81 --------------AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP 126
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
NK T+ S+L A S A LE GK +H +IIK G+ D + +L Y K GD+ +R+VF
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF 186
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+ ++ +S+ M+ A+ Y KE + LF +M I+P+++T +++L A + ++D
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLD 246
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+G K + + + + R T +V M R G + A+
Sbjct: 247 EG-KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAK 284
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
++T+ ++L L + K +H ++++ D+FL L + Y K + + +VF
Sbjct: 27 RATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFK 86
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
MP ++ ISW ++ A+ G+ K++ LFEEM+ PN++T +S+L AC ++
Sbjct: 87 EMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN 146
Query: 571 GLKYFNS-MEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
G K + ++ Y P R ++ M + G L A
Sbjct: 147 GKKIHSQIIKAGYQRDP--RVQNSLLSMYGKCGDLPRA 182
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 228/731 (31%), Positives = 359/731 (49%), Gaps = 108/731 (14%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
ET + LL+ + +G +H ++ KT L LL M++ +EA +
Sbjct: 95 ETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGK 154
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFD----------------------GMP----- 114
+ DL N ++ + G +EA L+ G+P
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 115 ------------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
E + ALI+ ++K G + + F+R P ++ ISW A I G+ +N
Sbjct: 215 REVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN 274
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
E L+LF + E V P+ +T +S+ AC + D RLG V G + K GF VSV
Sbjct: 275 DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN 334
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
NSLI + +G D A VF +ME +D+V
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLV------------------------------- 363
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ MI+ Y ++G PE+A + M P+ + VLSA A L L G+ +H
Sbjct: 364 SWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFA 423
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+ G+ V ++N+LID+YSKC R + +
Sbjct: 424 DRTGLTSYVIVANSLIDMYSKC------RCI----------------------------D 449
Query: 403 EAKELFDNMPKRNDVSWSAIISGY-LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+A E+F +P +N +SW++II G L ++ F+ +F F +M+LS + PN T SVL A
Sbjct: 450 KALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF-FFQQMILSLK-PNSVTLVSVLSAC 507
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A + +L GK++H ++ G +D FL AL D Y + G +E + F+ +K+ SW
Sbjct: 508 ARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWN 566
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
+++ G A+ G ++ LF +M ++ + P+E+T S+L ACS SG+V GL+YF SME
Sbjct: 567 ILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHK 626
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
++I PN +HY VVD+L R+GRL +A +FI MP +PD W +LL+ C+ Y+N ++ E
Sbjct: 627 FHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGEL 686
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A ++++++ + Y+LL N+YA +G+W + VRK+M E L GCSWVEV QVH
Sbjct: 687 AAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVH 746
Query: 702 FFFQKTDHNPK 712
F D +P+
Sbjct: 747 AFLTGDDFHPQ 757
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 206/459 (44%), Gaps = 75/459 (16%)
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
E V E T+ ++ + C G V + K V + N+L+++ ++ G++
Sbjct: 87 ELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLV 146
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A VF +M +RD+ SW +V++ Y ++GY
Sbjct: 147 EAWYVFGKMAERDLFSW-------------------------------NVLVGGYAKAGY 175
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+EA L+ +M +P+ F VL L L G VH HV++ G E DV + NA
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LI +Y KCG+ RLVFD + +D +SWN+MI GY N E LF M
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRRD---RISWNAMISGYFENDVCLEGLRLFFMM----- 287
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
E + P+ T +SV+ A ++ G+++HG
Sbjct: 288 -----------------------REFFVD---PDLMTMTSVISACEALGDERLGREVHGY 321
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+IK GF +V + +L ++ G + + VF +M K+ +SWT M+ G ++G +++
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKA 381
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI----YNIKPNGRHYT 592
+ + ME + P+E+TI SVL AC+ GL+DKG+ + Y I N
Sbjct: 382 VETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANS---- 437
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
++DM S+ + +A + + +P + +W S++ G +
Sbjct: 438 -LIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLR 474
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 21/371 (5%)
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH--VVSWNSMIGGYGLNGQ 400
L++ +E++ +I AL+ L +G V S V K V V N+++ + G
Sbjct: 88 LQVSVEEETYI--ALLRLCEWKRAASEGSRV-HSYVSKTVTRLGVRLGNALLSMFVRFGD 144
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ EA +F M +R+ SW+ ++ GY + FD +++ ML G P+ TF VL
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRT 204
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ L +G+++H +I+ GF DV + AL Y K GDI S+R VFDRMP ++ ISW
Sbjct: 205 CGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISW 264
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK---YFNS 577
M+ G E+ E + LF M + + P+ +T+ SV+ AC G G + Y
Sbjct: 265 NAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIK 324
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
+ + N ++ M S G EAE + M F+ D +W +++SG Y+
Sbjct: 325 TGFVAEVSVNNS----LIQMHSSVGCWDEAEMVFSKMEFK-DLVSWTAMISG---YEKNG 376
Query: 638 IAERAVKNLWKLAEEH--PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+ E+AV+ + E P + S + A AG + + +M + ++G S+V
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGL---GLLDKGIMLHEFADRTGLTSYVI 433
Query: 696 VRNQVHFFFQK 706
V N + + K
Sbjct: 434 VANSLIDMYSK 444
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 345/646 (53%), Gaps = 37/646 (5%)
Query: 69 SRKSLEANEIVKDLN-GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
SR +++ + +V L G + + N ++ ++ G+++ A+ +F + + W ++I G
Sbjct: 162 SRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYG 221
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ + +++ F R P ++ +SW I F Q+GF + L +F+++ G PN +T+
Sbjct: 222 YSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTY 281
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
S+ ACA +D + G + I RME
Sbjct: 282 GSVLSACASTSDLKWGAHLHARIL--------------------------------RMEH 309
Query: 248 R-DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
D+V ++D++ + G L A+R+F + E + +SW+ +I G E+A LF Q
Sbjct: 310 SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQ 369
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R S + +L + +G +H + +K G+ + NA+I +Y+KCG+
Sbjct: 370 MRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGD 429
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
T LVF + ++ +SW +MI + +G + +A+ FD MP+RN V+W++++S Y
Sbjct: 430 TDKADLVFRLMPLRNT---ISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTY 486
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+++ + ++ M +G P+ TF++ + A A +A ++ G + K G +V
Sbjct: 487 VQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNV 546
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ ++ Y++ G I+ ++ FD + DK+ ISW M+ A++G + I+ FE+M KT
Sbjct: 547 SVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKT 606
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
PN ++ +SVL CSH GLV +G YF+SM ++ I P H++C+VD+L R+G L +
Sbjct: 607 ECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQ 666
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A+D I MPF+P++ W++LL C+ + + ++AE A K L +L E GYVLLSN+Y+
Sbjct: 667 AKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSE 726
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G + ++RKLM KG+R S GCSW+EV N+VH F +P+
Sbjct: 727 SGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQ 772
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 291/596 (48%), Gaps = 42/596 (7%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
R LH LI +G+ +L LL MY + +A ++ ++ + ++ N MI A +
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+ +A++LFD MP R ++ +SWT I G+
Sbjct: 87 SSRMSDAEKLFDEMPVR-----------------------------VKDSVSWTTMISGY 117
Query: 160 VQNGF---SFEALKLFLKLLESGVKP-NEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
QNGF SFE L ++ G K + +F+S+ KAC + D RL + + L+ K GF
Sbjct: 118 SQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGF 177
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ NS++ + +K G+VDLA +VF +E+ + W ++ + +M +A +IF+
Sbjct: 178 GMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNR 237
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MPER+EVSW+ +I+ ++Q G+ + +F +M F PN + VLSA AS L+ G
Sbjct: 238 MPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWG 297
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
H+HA +L++ D+ N LID+Y+KCG + VF S+ E D +SWNS+I G
Sbjct: 298 AHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHD---HISWNSLITGV 354
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G E+A LF+ M +R+ V I + +A E LL G S
Sbjct: 355 VHFGLGEDALILFNQM-RRSSVVLDEFILPTILGVCSGPDYASTGE-LLHGYTIKSGMGS 412
Query: 456 SVLCASASVASLEKGKDLHGK--IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
S +A + K D + +L + TA+ +++SGDI +R FD MP
Sbjct: 413 SAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMP 472
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++N ++W M+ ++G+++E + L+ M + P+ +T + + AC+ +V G++
Sbjct: 473 ERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQ 532
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + N +V M SR G + EA++ +S+ + D +W ++L+
Sbjct: 533 VVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAA 586
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 177/378 (46%), Gaps = 49/378 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG+ IK+G+ + ++ MY + +A+ + + + + + MI A +
Sbjct: 398 GELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSR 457
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G++ +A+ FD MPERN V+W +++S +
Sbjct: 458 SGDIGKARGYFDMMPERNIVTWNSMLS-------------------------------TY 486
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
VQNGFS E LKL++ + +GV+P+ +TF++ +ACA++ +LG+ V K G +V
Sbjct: 487 VQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNV 546
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
SV NS++T+ + G + A++ FD ++ +D++SW +L F + G + F++M +
Sbjct: 547 SVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKT 606
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRS 334
N +S+ +++ + G E F MTR + P FS ++ L R+
Sbjct: 607 ECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLG-----RA 661
Query: 335 GMHVHAHVLKIGIEKDVFISNALI--DLYSKCGETKDGRLVFDS---IVEKDVAHVVSWN 389
G+ A L IE F NA + L C D RL + ++E DV +
Sbjct: 662 GLLEQAKDL---IEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYV 718
Query: 390 SMIGGYGLNGQMEEAKEL 407
+ Y +G+++ ++
Sbjct: 719 LLSNMYSESGELDNVADM 736
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/566 (34%), Positives = 309/566 (54%), Gaps = 34/566 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F + ++ W I G Q+ EA+ ++ ++ G+ N +T + KACA ++D
Sbjct: 73 FNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDI 132
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + K GFE ++ V N+LI + +
Sbjct: 133 VSGRKIHVHALKLGFESYLFVSNALIHM-------------------------------Y 161
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
G LG A+++FD M +R+ VSW+ +I Y+Q +E RLF MT + K +
Sbjct: 162 AMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMV 221
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ A + L + ++ + +E DV++ N LID+Y + + + VFD + E+
Sbjct: 222 KIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRER 281
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
++ VSWN+++ G+ G + A++LFDNMPKR+ +SW+++I+GY + QF +F
Sbjct: 282 NI---VSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQ 338
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM+ + P+K T +SVL A A + L+ G +H I + G D+++G +L D Y K G
Sbjct: 339 EMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCG 398
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+E + VF RM DK+ +SWT ++ GLA +G+A +++LF +M + + P T + +L
Sbjct: 399 MVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILL 458
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
AC+H+GLV+KGL+YF SME ++ + P +HY CVVD+LSRSG + +A +FI MP PD
Sbjct: 459 ACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDV 518
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W LLS CK + N +AE A K L +L YVLLSN YA RW DAM +R+LM
Sbjct: 519 VVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELM 578
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQK 706
+ ++K G S +EV V + Q+
Sbjct: 579 EDSDVQKPSGSSSIEVDGMVSNYSQE 604
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 205/439 (46%), Gaps = 80/439 (18%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GF+ L V N +I+ G L AQ++FDGM +R+ VSW L
Sbjct: 146 GFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTL----------------- 188
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
ICG+ Q E L+LF + + +K + VT I AC+ + D+
Sbjct: 189 --------------ICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWE 234
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
S+ I + E V + N+LI + + +LA+ VFDRM +R++VSW ++
Sbjct: 235 FADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHA 294
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
++G+L AR++FD MP+R+ +SW+ MI Y+Q+ +A +LF++M KP+ +
Sbjct: 295 KVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVAS 354
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLSA A L L G VH ++ + G++ D+++ N+LID+Y KCG + VF + +KD
Sbjct: 355 VLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKD 414
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
VSW S+I G +NG A +L F++
Sbjct: 415 ---SVSWTSVISGLAVNGFANSALDL-------------------------------FSQ 440
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKG-------KDLHGKIIKLGFPYDVFLGTALTD 494
ML G P TF +L A A + KG + +HG + P G + D
Sbjct: 441 MLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLV-----PAMKHYG-CVVD 494
Query: 495 TYAKSGDIESSRRVFDRMP 513
++SG+I+ + +MP
Sbjct: 495 LLSRSGNIDKAYEFIKKMP 513
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 192/372 (51%), Gaps = 19/372 (5%)
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+L +A +F+++ V W+ MI +QS +P EA ++ +M N +
Sbjct: 65 NLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFK 124
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A + + SG +H H LK+G E +F+SNALI +Y+ CG+ + +FD ++++D
Sbjct: 125 ACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRD--- 181
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAII--SGYLEHKQF-DLVFA 437
+VSWN++I GY + +E LFD M K + V+ II +L +F D +
Sbjct: 182 LVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVK 241
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
E L ++ +T + S+A L +G + ++ AL +A
Sbjct: 242 YIKENNLEIDVYLGNTLID-MYGRRSLAELAQG------VFDRMRERNIVSWNALVMGHA 294
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G++ ++R++FD MP ++ ISWT M+ G +++ +++ LF+EM + P+++T+ S
Sbjct: 295 KVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVAS 354
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL AC+H G +D G + + + ++ + ++DM + G + +A + + M +
Sbjct: 355 VLSACAHLGKLDVGWAVHHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK-D 412
Query: 618 PDSNAWASLLSG 629
DS +W S++SG
Sbjct: 413 KDSVSWTSVISG 424
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 145/345 (42%), Gaps = 49/345 (14%)
Query: 314 PNTSCFSIVLSALASLKALRSGM------HVHAHVLKIGIEKDVFISNALIDLYS-KCGE 366
PNT F+ A S + ++ + +HAH+++ + D F+ + +I YS
Sbjct: 6 PNTRLFTSSSMAPKSGRVSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTN 65
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
LVF+ I + +V WN MI G + EA ++ M
Sbjct: 66 LHKAHLVFNQI---ECPTLVVWNHMIRGLSQSDHPVEAIHMYTRM--------------- 107
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
H Q G N T + A A V+ + G+ +H +KLGF +
Sbjct: 108 --HHQ--------------GITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYL 151
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+ AL YA G + ++++FD M D++ +SW ++ G ++ KE + LF+ M
Sbjct: 152 FVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAA 211
Query: 547 SITPNELTILSVLFACSHSG---LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+I + +T++ ++ ACSH G D +KY N++ + ++DM R
Sbjct: 212 NIKADAVTMVKIILACSHLGDWEFADSMVKYIKE----NNLEIDVYLGNTLIDMYGRRSL 267
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
A+ + M E + +W +L+ G N A + N+ K
Sbjct: 268 AELAQGVFDRMR-ERNIVSWNALVMGHAKVGNLTAARKLFDNMPK 311
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI + K G VE+++ F R ++ +SWT+ I G NGF+ AL LF ++L GV+P
Sbjct: 389 SLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQP 448
Query: 183 NEVTFSSICKACAEINDFRLGL-------SVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
TF I ACA GL SV GL+ KH L++ S G +
Sbjct: 449 THGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAM---KHYGCVVDLLSRS---GNI 502
Query: 236 DLARSVFDRME-KRDVVSWTVIL 257
D A +M DVV W ++L
Sbjct: 503 DKAYEFIKKMPIVPDVVVWRILL 525
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 306/578 (52%), Gaps = 40/578 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE N++ W + G + AL+++++++ G PN +F + K+CA+ F
Sbjct: 21 FETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAF 80
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + + K G V SLI++ + G ++ AR VFD RDVVS T ++ +
Sbjct: 81 EEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGY 140
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
GD AR++FDE+ ER+ VSW+ MI Y ++G EEA LF++M R + +P+
Sbjct: 141 ASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLV 200
Query: 321 IVLSALASLKALRSGMHVHAHVLKI----GIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
V+SA A ++ G VH+ V G + I NALIDLYSKCG+
Sbjct: 201 SVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD---------- 250
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+E A LF+ + ++ VSW+ +I GY +
Sbjct: 251 ------------------------VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEAL 286
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTD 494
+F EML SGE PN T SVL A A + +++ G+ +H I K G + L T+L D
Sbjct: 287 LLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLID 346
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK GDIE++ +VF+ M ++ SW M+ G A G A + +LF M + P+++T
Sbjct: 347 MYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDIT 406
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ +L ACSHSGL+D G + F SM YN+ P HY C++D+L SG EAE+ I++M
Sbjct: 407 FVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTM 466
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P EPD W SLL CK + N ++AE + L K+ E+ YVLLSNIYA+AGRW D
Sbjct: 467 PMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVA 526
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VR ++ KG++K GCS +EV + VH F +P+
Sbjct: 527 RVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPR 564
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 199/363 (54%), Gaps = 9/363 (2%)
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+F+ + E N + W+ M+ + S P A ++ +M PN+ F +L + A KA
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
G +HA VLK+G D ++ +LI +Y++ G +D R VFD+ +D VVS ++
Sbjct: 80 FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD---VVSCTAL 136
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GY G A+++FD + +R+ VSW+A+I+GY+E+ +++ +F EM+ + P++
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKL----GFPYDVFLGTALTDTYAKSGDIESSRR 507
T SV+ A A S+E G+ +H + GF + + AL D Y+K GD+E++
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+F+ + K+ +SW ++ G + KE++ LF+EM ++ PN++T+LSVL AC+H G
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316
Query: 568 VDKGLKYFNSME-PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+D G ++ + + T ++DM ++ G + A NSM + S +W ++
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS-SWNAM 375
Query: 627 LSG 629
+ G
Sbjct: 376 IFG 378
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 44/376 (11%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
+++K G D VH +I+ + G LE+A+++FD R+ VS TALI+G+ G
Sbjct: 89 QVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRS 148
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ F+ ++V+SW A I G+V+NG EAL+LF +++ + V+P+E T S+ ACA+
Sbjct: 149 ARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQ 208
Query: 197 INDFRLGLSVFGLIFKA----GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
LG V + GF + + N+LI L K G+V+ A +F+ + +DVVS
Sbjct: 209 SGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVS 268
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W + +I Y + +EA LF++M R
Sbjct: 269 W-------------------------------NTLIGGYTHTNLYKEALLLFQEMLRSGE 297
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDG 370
PN VL A A L A+ G +H ++ K G+ + + +LID+Y+KCG+ +
Sbjct: 298 CPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAA 357
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGY 426
VF+S++ + ++ SWN+MI G+ ++G+ A +LF M + +D+++ ++S
Sbjct: 358 HQVFNSMLYRSLS---SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSAC 414
Query: 427 LEHKQFDLVFAVFNEM 442
DL +F M
Sbjct: 415 SHSGLLDLGRQIFKSM 430
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 162/348 (46%), Gaps = 55/348 (15%)
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A +F+ + + N + W+ ++ G+ ++ M+ G +PN +F +L + A
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS------------------ 505
+ E+G+ +H +++KLG D ++ T+L YA++G +E +
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 506 -------------RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
R+VFD + +++ +SW M+ G E+G +E++ LF+EM +T++ P+E
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 553 LTILSVLFACSHSGLVDKGLK---YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
T++SV+ AC+ SG ++ G + + + + + + + ++D+ S+ G + A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL--AEEHPAGYVLLSNIYASA 667
+ + D +W +L+ G Y + + + A+ ++ + E P LLS + A A
Sbjct: 257 LFEGLSCK-DVVSWNTLIGG---YTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312
Query: 668 -------GRWIDAMNVRKL---MTEKGLRKS-----GGCSWVEVRNQV 700
GRWI +KL E LR S C +E +QV
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQV 360
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 153/382 (40%), Gaps = 81/382 (21%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL------GSRKSLEAN---- 76
LLK +GR +H ++K G +RY+ T L+ MY +RK +A+
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129
Query: 77 ---------------------EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM-- 113
++ ++ D+V N MI ++ G EEA LF M
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 114 ----PE--------------------RNEVSWT-----------------ALISGFMKHG 132
P+ R SW ALI + K G
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
VE + FE ++V+SW I G+ EAL LF ++L SG PN+VT S+
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309
Query: 193 ACAEINDFRLGLSVFGLIFK--AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
ACA + +G + I K G S+ SLI + K G+++ A VF+ M R +
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
SW ++ F G A +F M E +++++ +++ + SG + ++F+
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKS 429
Query: 307 MTR-YSFKPNTSCFSIVLSALA 327
MT+ Y+ P + ++ L
Sbjct: 430 MTQDYNLTPKLEHYGCMIDLLG 451
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 8/212 (3%)
Query: 117 NEVSW-TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
NE S T+LI + K G +E + F ++++ SW A I GF +G + A LF ++
Sbjct: 336 NETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRM 395
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ V+P+++TF + AC+ LG +F + + +I L G
Sbjct: 396 RGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGL 455
Query: 235 VDLARSVFDRME-KRDVVSWTVILDVFIEMGDL----GEARRIFDEMPERNEVSWSVMIA 289
A + M + D V W +L + G+L A+++ PE N S+ ++
Sbjct: 456 FKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPE-NSGSYVLLSN 514
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
Y +G E+ R+ + K C SI
Sbjct: 515 IYATAGRWEDVARVRGVLNGKGMKKVPGCSSI 546
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 228/731 (31%), Positives = 359/731 (49%), Gaps = 108/731 (14%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
ET + LL+ + +G +H ++ KT L LL M++ +EA +
Sbjct: 95 ETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGK 154
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFD----------------------GMP----- 114
+ DL N ++ + G +EA L+ G+P
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 115 ------------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
E + ALI+ ++K G + + F+R P ++ ISW A I G+ +N
Sbjct: 215 REVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN 274
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
E L+LF + E V P+ +T +S+ AC + D RLG V G + K GF VSV
Sbjct: 275 DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN 334
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
NSLI + +G D A VF +ME +D+ V
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDL-------------------------------V 363
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ MI+ Y ++G PE+A + M P+ + VLSA A L L G+ +H
Sbjct: 364 SWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFA 423
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+ G+ V ++N+LID+YSKC R + +
Sbjct: 424 DRTGLTSYVIVANSLIDMYSKC------RCI----------------------------D 449
Query: 403 EAKELFDNMPKRNDVSWSAIISGY-LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+A E+F +P +N +SW++II G L ++ F+ +F F +M+LS + PN T SVL A
Sbjct: 450 KALEVFHRIPNKNVISWTSIILGLRLNYRSFEALF-FFQQMILSLK-PNSVTLVSVLSAC 507
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A + +L GK++H ++ G +D FL AL D Y + G +E + F+ +K+ SW
Sbjct: 508 ARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWN 566
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
+++ G A+ G ++ LF +M ++ + P+E+T S+L ACS SG+V GL+YF SME
Sbjct: 567 ILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHK 626
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
++I PN +HY VVD+L R+GRL +A +FI MP +PD W +LL+ C+ Y+N ++ E
Sbjct: 627 FHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGEL 686
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A ++++++ + Y+LL N+YA +G+W + VRK+M E L GCSWVEV QVH
Sbjct: 687 AAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVH 746
Query: 702 FFFQKTDHNPK 712
F D +P+
Sbjct: 747 AFLTGDDFHPQ 757
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 206/459 (44%), Gaps = 75/459 (16%)
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
E V E T+ ++ + C G V + K V + N+L+++ ++ G++
Sbjct: 87 ELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLV 146
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A VF +M +RD+ SW +V++ Y ++GY
Sbjct: 147 EAWYVFGKMAERDLFSW-------------------------------NVLVGGYAKAGY 175
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+EA L+ +M +P+ F VL L L G VH HV++ G E DV + NA
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LI +Y KCG+ RLVFD + +D +SWN+MI GY N E LF M
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRRD---RISWNAMISGYFENDVCLEGLRLFFMM----- 287
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
E + P+ T +SV+ A ++ G+++HG
Sbjct: 288 -----------------------REFFVD---PDLMTMTSVISACEALGDERLGREVHGY 321
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+IK GF +V + +L ++ G + + VF +M K+ +SWT M+ G ++G +++
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKA 381
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI----YNIKPNGRHYT 592
+ + ME + P+E+TI SVL AC+ GL+DKG+ + Y I N
Sbjct: 382 VETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANS---- 437
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
++DM S+ + +A + + +P + +W S++ G +
Sbjct: 438 -LIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLR 474
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 21/371 (5%)
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH--VVSWNSMIGGYGLNGQ 400
L++ +E++ +I AL+ L +G V S V K V V N+++ + G
Sbjct: 88 LQVSVEEETYI--ALLRLCEWKRAASEGSRV-HSYVSKTVTRLGVRLGNALLSMFVRFGD 144
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ EA +F M +R+ SW+ ++ GY + FD +++ ML G P+ TF VL
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRT 204
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ L +G+++H +I+ GF DV + AL Y K GDI S+R VFDRMP ++ ISW
Sbjct: 205 CGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISW 264
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK---YFNS 577
M+ G E+ E + LF M + + P+ +T+ SV+ AC G G + Y
Sbjct: 265 NAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIK 324
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
+ + N ++ M S G EAE + M F+ D +W +++SG Y+
Sbjct: 325 TGFVAEVSVNNS----LIQMHSSVGCWDEAEMVFSKMEFK-DLVSWTAMISG---YEKNG 376
Query: 638 IAERAVKNLWKLAEEH--PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+ E+AV+ + E P + S + A AG + + +M + ++G S+V
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGL---GLLDKGIMLHEFADRTGLTSYVI 433
Query: 696 VRNQVHFFFQK 706
V N + + K
Sbjct: 434 VANSLIDMYSK 444
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 328/629 (52%), Gaps = 67/629 (10%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFE---RNPFQNVISWTAAICGFVQNGFSFEALKL 171
E N AL++ + + G +E++ F+ R +VISW + + V+ AL L
Sbjct: 181 ESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDL 240
Query: 172 FLKLL------ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
F ++ + + + ++ +I ACA + + + G VCN+L
Sbjct: 241 FSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNAL 300
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN----E 281
I K G + A +VF+ ME +DVVSW ++ + + G G A +F M + N
Sbjct: 301 IDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDV 360
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
++WS +IA Y Q GY +EA F+QM Y +PN+ +LSA ASL AL GM HA+
Sbjct: 361 ITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAY 420
Query: 342 VLKIGI------------EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
LK + +D+ + NALID+YSKC K
Sbjct: 421 SLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFK--------------------- 459
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKR--NDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-- 445
A+ +F+++P+R N V+W+ +I GY ++ + +F+EM+
Sbjct: 460 -------------AARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPY 506
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD---VFLGTALTDTYAKSGDI 502
PN T S +L A A ++SL GK +H + + Y+ F+ L D Y+K GD+
Sbjct: 507 AVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR-HHEYESSVYFVANCLIDMYSKCGDV 565
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+++R VFD MP +NE+SWT M+ G G KE++++F++M+K P++++ L +L+AC
Sbjct: 566 DTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYAC 625
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SHSG+VD+GL YF+ M Y + + +HY CV+D+L+RSGRL +A I MP EP +
Sbjct: 626 SHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAI 685
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LLS C+ + N ++AE A+ L + E+ Y L+SNIYA+A RW D +R+LM +
Sbjct: 686 WVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKK 745
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
G++K GCSWV+ + FF +P
Sbjct: 746 SGIKKRPGCSWVQGKKGTASFFVGDRSHP 774
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 267/547 (48%), Gaps = 83/547 (15%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T +++ ++ G +++ ER + W + ++ G A+ + ++L +G K
Sbjct: 87 TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T KAC E+ +R G + GLI GFE +V VCN+L+ + + G ++ A V
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206
Query: 242 FDRMEKR---DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
FD + ++ DV+SW I +A + + P
Sbjct: 207 FDEITRKGIDDVISWNSI-------------------------------VAAHVKGSNPR 235
Query: 299 EAFRLFRQMTRYSFKPNTS----CFSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVF 352
A LF +MT + T+ SIV L A ASLKAL +H++ ++ G D F
Sbjct: 236 TALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAF 295
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
+ NALID Y+KCG KD VF+ + KD VVSWN+M+ GY +G+ A ELF NM
Sbjct: 296 VCNALIDTYAKCGSMKDAVNVFNVMEFKD---VVSWNAMVTGYTQSGKFGAAFELFKNMR 352
Query: 413 KRN----DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
K N ++WSA+I+GY + F +M+L G PN T S+L A AS+ +L
Sbjct: 353 KENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALS 412
Query: 469 KGKDLHGKIIK------------LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP--D 514
+G + H +K G D+ + AL D Y+K +++R +F+ +P +
Sbjct: 413 QGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRE 472
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSH-------- 564
+N ++WTVM+ G A+ G + +++ LF EM + ++ PN TI +L AC+H
Sbjct: 473 RNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGK 532
Query: 565 --SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
V + +Y +S+ + N C++DM S+ G + A + +SMP + + +
Sbjct: 533 QIHAYVTRHHEYESSVYFVAN---------CLIDMYSKCGDVDTARNVFDSMP-KRNEVS 582
Query: 623 WASLLSG 629
W S++SG
Sbjct: 583 WTSMMSG 589
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 189/379 (49%), Gaps = 60/379 (15%)
Query: 63 LIMYLGSRKSLEANEIVKDLNGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMP 114
++ L + SL+A K+++ + D V N +I+ + G++++A +F+ M
Sbjct: 262 IVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVME 321
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQN----VISWTAAICGFVQNGFSFEALK 170
++ VSW A+++G+ + G+ + F+ +N VI+W+A I G+ Q G+ EAL
Sbjct: 322 FKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALD 381
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF------------EKH 218
F +++ G +PN VT S+ ACA + G+ K +
Sbjct: 382 TFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGED 441
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRD--VVSWTVILDVFIEMGDLGEARRIFDEM 276
+ V N+LI + K AR++F+ + +R+ VV+WTV++ + + GD +A ++F EM
Sbjct: 442 LVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEM 501
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
+ Y+ PN S +L A A L +LR G
Sbjct: 502 ISKP-----------------------------YAVAPNAYTISCILMACAHLSSLRMGK 532
Query: 337 HVHAHVLKIG-IEKDV-FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+HA+V + E V F++N LID+YSKCG+ R VFDS+ +++ VSW SM+ G
Sbjct: 533 QIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRN---EVSWTSMMSG 589
Query: 395 YGLNGQMEEAKELFDNMPK 413
YG++G+ +EA ++FD M K
Sbjct: 590 YGMHGRGKEALDIFDKMQK 608
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 52/243 (21%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC+I+ + G+++ A+ +FD MP+RNEVSWT+++SG+ HGR +
Sbjct: 551 VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK------------- 597
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE-------INDFR 201
EAL +F K+ ++G P++++F + AC+ ++ F
Sbjct: 598 ------------------EALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFD 639
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-WTVILDVF 260
+ S +G+I A +H + +I L + G +D A M + W +L
Sbjct: 640 IMRSDYGVIASA---QHYAC---VIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSAC 693
Query: 261 -----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+E+ + + + M N+ S++++ Y + ++ R+ + M + K
Sbjct: 694 RVHSNVELAEYALNKLV--SMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKR 751
Query: 316 TSC 318
C
Sbjct: 752 PGC 754
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 38/190 (20%)
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG---FPYDVF-------------- 487
+G + + F+S+L SV ++ + +H KII G +P +
Sbjct: 25 TGRDVSPTHFASLLKECRSVNTV---RQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVS 81
Query: 488 ---LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
LGT + +Y G + V +R+ + W ++VR E G +I + M
Sbjct: 82 PKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRML 141
Query: 545 KTSITPNELTILSVLFACS-----HSGLVDKGLKYFNSMEPIYNIKPNGRHYTC--VVDM 597
+ P+ T+ L AC SG GL N E N+ + C +V M
Sbjct: 142 RAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFES--NV------FVCNALVAM 193
Query: 598 LSRSGRLSEA 607
SRSG L +A
Sbjct: 194 YSRSGSLEDA 203
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 213/674 (31%), Positives = 334/674 (49%), Gaps = 95/674 (14%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +H +IKTG+H Y ++LL C+++ +
Sbjct: 19 RIIHAQMIKTGLHNTNYALSKLL--------------------------EXCVLSPH--- 49
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
FDG+P V F+ ++ W G
Sbjct: 50 ---------FDGLPYAISV---------------------FDTIQEPXLLIWNTMFRGHA 79
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ ALKL++ ++ G+ PN TF + K+CA+ F+ G + G + K GF+ +
Sbjct: 80 LSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLY 139
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ SLI++ ++ G ++ A+ V D+ RDVVS+T ++ + G + A ++FDE+P ++
Sbjct: 140 IHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKD 199
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ I+ Y ++G +EA LF++M + + +P+ S VLSA A ++ G VH+
Sbjct: 200 VVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHS 259
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G ++ I NALIDLYSKCGE
Sbjct: 260 WINDHGFGXNLKIVNALIDLYSKCGE---------------------------------- 285
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+E A LF + ++ +SW+ +I GY + +F +ML SGE PN T S+L A
Sbjct: 286 LETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSA 345
Query: 461 SASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + +++ G+ +H I K G L T+L D YAK GDIE++++VFD M +++
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW M+ G A G A + ++F M K I P+++T + +L ACSHSG++D G F SM
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
Y + P HY C++D+ SG EAE IN+M EPD W SLL CK + N ++
Sbjct: 466 TRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVEL 525
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E +NL K+ E+P YVLLSNIYA+A RW + R L+ +KG++K GCS +E+ +
Sbjct: 526 GESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDS 585
Query: 699 QVHFFFQKTDHNPK 712
VH F +P+
Sbjct: 586 VVHEFIIGDKFHPR 599
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 195/422 (46%), Gaps = 71/422 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +G+ LHG ++K G + Y+ T L+ MY+ + + +A ++ + D
Sbjct: 109 LLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRD 168
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + +I G +E A ++FD +P ++ VSW A ISG+ + G +
Sbjct: 169 VVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYK----------- 217
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
EAL+LF K++++ V+P+E T ++ ACA+ LG V
Sbjct: 218 --------------------EALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQV 257
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I GF ++ + N+LI L K GE++ A +F + +DV+SW
Sbjct: 258 HSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW------------- 304
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ +I Y +EA LF+ M R KPN +LSA
Sbjct: 305 ------------------NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSAC 346
Query: 327 ASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L A+ G +H ++ K G+ + +LID+Y+KCG+ + + VFDS++ + ++
Sbjct: 347 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS- 405
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFN 440
SWN+MI G+ ++G+ A ++F M K +D+++ ++S DL +F
Sbjct: 406 --SWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFR 463
Query: 441 EM 442
M
Sbjct: 464 SM 465
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 342/631 (54%), Gaps = 85/631 (13%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V+ +AL+ + K +++ S+ +F P +N +SW+A I G VQN L+LF ++ ++
Sbjct: 210 VTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKA 269
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV ++ TF+S+ ++CA ++ RLG + G K F
Sbjct: 270 GVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDF----------------------- 306
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
DVV T LD++++ +L +A+++F+ +P N S++ +I Y +S +
Sbjct: 307 --------GTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS---D 355
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+ L +F+ A A +K G+ VH +K + ++ ++NA++
Sbjct: 356 KGLGLDEVSLSGAFR-----------ACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 404
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ------------------ 400
D+Y KCG + LVF+ +V +D VSWN++I + NG
Sbjct: 405 DMYGKCGALVEACLVFEEMVSRDA---VSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRL 461
Query: 401 -------------------MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
ME+A++L D + ++ VSW+AIISG+ KQ + F++
Sbjct: 462 GLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSK 521
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
ML G P+ T++++L A++ ++E GK +H +IIK D ++ + L D Y+K G+
Sbjct: 522 MLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGN 581
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + +F++ P+++ ++W MV G A+ G +E++ +FE M+ ++ PN T L+VL A
Sbjct: 582 MQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRA 641
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C H GLV+KGL YF+SM Y + P HY+CVVD++ RSG++S+A + I MPFE D+
Sbjct: 642 CGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAV 701
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LLS CK + N ++AE+A ++ +L E A YVLLSNIYA+AG W + +RK+M
Sbjct: 702 IWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMR 761
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
GL+K GCSW+E++++VH F +P+
Sbjct: 762 FNGLKKEPGCSWIEIKSEVHAFLVGDKAHPR 792
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 150/583 (25%), Positives = 271/583 (46%), Gaps = 70/583 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC+I I+ +LE A ++FDGMP+R+ VSW A++ G+ G + + F+ P ++
Sbjct: 79 VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW + I G++ NG + + +FL++ G + TF+ + K+C+ + D G+ + G
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 198
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L K GF+ C DVV+ + +LD++ + L
Sbjct: 199 LAVKMGFD-----C--------------------------DVVTGSALLDMYAKCKKLDC 227
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
+ + F MPE+N VSWS +IA Q+ LF++M + + S F+ V + A
Sbjct: 228 SIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAG 287
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L ALR G +H H LK DV I A +D+Y KC D + +F+S+ ++ S+
Sbjct: 288 LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ---SY 344
Query: 389 NSMIGGYG------------LNGQMEEAKEL-------------FDNMPKRNDVSWSAII 423
N++I GY L+G + ++ + N +AI+
Sbjct: 345 NAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 404
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL--HGKIIKLG 481
Y + VF EM+ + ++++++ A + EK L H +IIK
Sbjct: 405 DMYGKCGALVEACLVFEEMVSRDAV----SWNAIIAAHEQNGNEEKTLSLFIHNRIIKSR 460
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D F+G AL D Y+K G +E + ++ DR+ ++ +SW ++ G + ++E+ F
Sbjct: 461 LGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFS 520
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M + + P+ T ++L C++ V+ G K ++ ++ + + +VDM S+
Sbjct: 521 KMLEMGVDPDNFTYATILDTCANLVTVELG-KQIHAQIIKKELQSDAYISSTLVDMYSKC 579
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
G + + + P D W +++ G Y + E A+K
Sbjct: 580 GNMQDFQLIFEKAP-NRDFVTWNAMVCG---YAQHGLGEEALK 618
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 234/506 (46%), Gaps = 63/506 (12%)
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
TFS I + C++ G + F+ V V N LI + +K +++ A VFD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
+RD VSW +L + GD+G A+++FD MPER+ VSW+ +I+ Y +G + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
QM R + + F++VL + +SL+ G+ +H +K+G + DV +AL+D+Y+KC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ F S+ EK+ VSW+++I G N + ELF M K
Sbjct: 224 KLDCSIQFFHSMPEKN---WVSWSAIIAGCVQNDDLRGGLELFKEMQK------------ 268
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
+G ++STF+SV + A +++L G LHG +K F D
Sbjct: 269 -------------------AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTD 309
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES--GYAKESINLFEEM 543
V +GTA D Y K ++ ++++F+ +P+ N S+ ++ G A S G + ++L
Sbjct: 310 VVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAF 369
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
++ +L L V GL K L + N ++DM + G
Sbjct: 370 RACAVIKGDLEGLQV------HGLSMKSL-----------CQSNICVANAILDMYGKCGA 412
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ------IAERAVKNLWKLAEEHPAGY 657
L EA M D+ +W ++++ + NE+ I R +K+ +L + G
Sbjct: 413 LVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKS--RLGLDSFVGI 469
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEK 683
L+ ++Y+ G A + + E+
Sbjct: 470 ALI-DMYSKCGMMEKAEKLHDRLAEQ 494
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 211/502 (42%), Gaps = 121/502 (24%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
L + LGS+ L + + D G D+V+ ++ ++ NL +AQ+LF+ +P N S+
Sbjct: 288 LSALRLGSQ--LHGHALKTDF-GTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
A+I G+ + + G+
Sbjct: 345 NAIIVGYARS---------------------------------------------DKGLG 359
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+EV+ S +ACA I GL V GL K+ + ++ V N+++ + K G + A V
Sbjct: 360 LDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 419
Query: 242 FDRMEKRDVVSWTVI-------------------------------------LDVFIEMG 264
F+ M RD VSW I +D++ + G
Sbjct: 420 FEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCG 479
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ +A ++ D + E+ VSW+ +I+ ++ EEA + F +M P+ ++ +L
Sbjct: 480 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 539
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A+L + G +HA ++K ++ D +IS+ L+D+YSKCG +D +L+F+ +D
Sbjct: 540 TCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRD--- 596
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
V+WN+M+ GY +G EEA ++F+ M N
Sbjct: 597 FVTWNAMVCGYAQHGLGEEALKIFEYMQLEN----------------------------- 627
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
PN +TF +VL A + +EKG H + G + + + D +SG +
Sbjct: 628 --VKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVS 685
Query: 504 SSRRVFDRMP-DKNEISWTVMV 524
+ + + MP + + + W ++
Sbjct: 686 KALELIEGMPFEADAVIWRTLL 707
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 163/376 (43%), Gaps = 40/376 (10%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
++G +HG +K+ + +L MY +EA + +++ D V N +I A+
Sbjct: 379 LEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAH 438
Query: 98 IQWGNLEEA------QRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
Q GN E+ R+ + ALI + K G +E++ +R Q V+S
Sbjct: 439 EQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVS 498
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W A I GF S EA K F K+LE GV P+ T+++I CA + LG + I
Sbjct: 499 WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQII 558
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K + + ++L+ + K G + + +F++ RD V+W
Sbjct: 559 KKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTW------------------ 600
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+ M+ Y Q G EEA ++F M + KPN + F VL A +
Sbjct: 601 -------------NAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 647
Query: 332 LRSGMH-VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+ G+H H+ + G++ + + ++D+ + G+ + + + + A V W +
Sbjct: 648 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE--ADAVIWRT 705
Query: 391 MIGGYGLNGQMEEAKE 406
++ ++G +E A++
Sbjct: 706 LLSICKIHGNVEVAEK 721
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 56/289 (19%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K TFS + + +L GK H ++I F VF+ L Y K D+E + +VFD
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
MP ++ +SW M+ G A G + LF+ M + + I L H ++D
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 571 GLKYFNSMEPIYN--------------------IKPNG----RHYTC-------VVDMLS 599
L+ M +++ I+ +G + C ++DM +
Sbjct: 162 FLQ-MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
+ +L + F +SMP E + +W+++++GC +N+ + R L+K E AG +
Sbjct: 221 KCKKLDCSIQFFHSMP-EKNWVSWSAIIAGC--VQNDDL--RGGLELFK--EMQKAGVGV 273
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
+ +AS R G S + + +Q+H KTD
Sbjct: 274 SQSTFASV-----------------FRSCAGLSALRLGSQLHGHALKTD 305
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 217/717 (30%), Positives = 344/717 (47%), Gaps = 104/717 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L QGR +H K G E ++ ++ +YL A + D+ D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PERNEVSW------------------- 121
V N +I+ + Q G+ E A +F+ M P+ +S
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 122 --------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
+L+ ++K G VE ++ F + NV+ W + F Q +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ +LF ++ +G++PN+ T+ I + C + LG + L K GFE + V LI
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K G ++ AR V + ++++DVVSWT M
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWT-------------------------------SM 417
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q ++A F++M + P+ + +S A + A+R G+ +HA + G
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV I NAL++LY++CG ++ F S E ++ ++ N ++ G+ +G EEA
Sbjct: 478 SGDVSIWNALVNLYARCGRIRE---AFSSFEEMELKDGITGNGLVSGFAQSGLHEEA--- 531
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
VF M SG N TF S L ASA++A +
Sbjct: 532 ----------------------------LKVFMRMDQSGVKHNVFTFVSALSASANLAEI 563
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +H ++IK G ++ +G AL Y K G E ++ F M ++NE+SW ++
Sbjct: 564 KQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSC 623
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ G E+++LF++M+K I PN++T + VL ACSH GLV++GL YF SM Y I+P
Sbjct: 624 SQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPR 683
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CV+D+ R+G+L A+ FI MP D+ W +LLS CK +KN ++ E A K+L
Sbjct: 684 PDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLL 743
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+L A YVLLSN YA +W + VRK+M ++G+RK G SW+EV+N VH FF
Sbjct: 744 ELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFF 800
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 243/526 (46%), Gaps = 70/526 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K+G V + FE ++ +SW A + G+ QNG EAL L+ ++ +GV P
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
SS+ +C + F G + +K GF + V N++ITL L+ G LA VF
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M RD V++ + +I+ + Q G+ E A +
Sbjct: 203 DMPHRDTVTF-------------------------------NTLISGHAQCGHGEHALEI 231
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M P+ S +L+A ASL L+ G +H+++ K GI D + +L+DLY K
Sbjct: 232 FEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVK 291
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ + ++F+S D +VV WN M+ +G + ND++ S
Sbjct: 292 CGDVETALVIFNS---SDRTNVVLWNLMLVAFG----------------QINDLAKS--- 329
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
F +F +M +G PN+ T+ +L ++ G+ +H +K GF
Sbjct: 330 ------------FELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE 377
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D+++ L D Y+K G +E +RRV + + +K+ +SWT M+ G + K+++ F+EM
Sbjct: 378 SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEM 437
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+K I P+ + + S + C+ + +GL+ + + + + +V++ +R GR
Sbjct: 438 QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLYARCGR 496
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
+ EA M + D L+SG + + E A+K ++
Sbjct: 497 IREAFSSFEEMELK-DGITGNGLVSG---FAQSGLHEEALKVFMRM 538
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 206/437 (47%), Gaps = 40/437 (9%)
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A++V + K +V +++D++ + G + ARR+F+E+ R+ VSW M++ Y Q+G
Sbjct: 66 AKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEA L+RQM R P S VLS+ + G +HA K G ++F+ NA+
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
I LY +CG + VF + +D V++N++I G+ G E A E+F+
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRD---TVTFNTLISGHAQCGHGEHALEIFE-------- 233
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
EM SG P+ T SS+L A AS+ L+KG LH +
Sbjct: 234 -----------------------EMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYL 270
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
K G D + +L D Y K GD+E++ +F+ N + W +M+ + +S
Sbjct: 271 FKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSF 330
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF +M+ I PN+ T +L C+ + +D G + +S+ + + ++DM
Sbjct: 331 ELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGVLIDM 389
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
S+ G L +A + M E D +W S+++G ++ + A A K + K P
Sbjct: 390 YSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-IWPDNI 447
Query: 658 VLLSNIYASAGRWIDAM 674
L S I AG I+AM
Sbjct: 448 GLASAISGCAG--INAM 462
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 203/489 (41%), Gaps = 128/489 (26%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+L+ T + G +H +KTG + Y++ L+ MY
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY------------------- 390
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++G LE+A+R+ + + E++ VSWT++I+G+++H
Sbjct: 391 ------------SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQH-------------- 424
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
C +AL F ++ + G+ P+ + +S CA IN R GL
Sbjct: 425 ---------ECCK--------DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ 467
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I+ +G+ VS+ N+L+ L + G + A S F+ ME +D
Sbjct: 468 IHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKD---------------- 511
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
++ + +++ + QSG EEA ++F +M + K N F LSA
Sbjct: 512 ---------------GITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA 556
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+L ++ G +HA V+K G + + NALI LY KCG +D ++ F + E++
Sbjct: 557 SANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERN---E 613
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN++I +G+ EA +LFD M K
Sbjct: 614 VSWNTIITSCSQHGRGLEALDLFDQMKK-------------------------------E 642
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIES 504
G PN TF VL A + V +E+G + + G + D + ++G ++
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 505 SRRVFDRMP 513
+++ + MP
Sbjct: 703 AKKFIEEMP 711
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%), Gaps = 34/236 (14%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA + G+ K + N LIDLYSK
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSK---------------------------------- 89
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
NG + A+ +F+ + R++VSW A++SGY ++ + ++ +M +G +P SSV
Sbjct: 90 NGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSV 149
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L + +G+ +H + K GF ++F+G A+ Y + G + RVF MP ++
Sbjct: 150 LSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDT 209
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+++ ++ G A+ G+ + ++ +FEEM+ + ++P+ +TI S+L AC+ G + KG +
Sbjct: 210 VTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS-ASVASLEK 469
M +R S ++G+L H+ V ++F + F+ L A + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
++H K + G +G L D Y+K+G + +RRVF+ + ++ +SW M+ G A+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG- 588
+G +E++ L+ +M + + P + SVL +C+ + L +G I G
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRL----------IHAQGY 170
Query: 589 RHYTC--------VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+H C V+ + R G AE MP D+ + +L+SG
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG 218
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 325/595 (54%), Gaps = 18/595 (3%)
Query: 124 LISGFMKHGRVEESMWYFERNP---FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
++S + G V ++ FE +P F N++ W + + V +G+ EAL+++ ++ + GV
Sbjct: 72 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 131
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ TF + +ACA + +L SV G + + GF+ ++ V N L+ + K+G +D AR
Sbjct: 132 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 191
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGY 296
VF+RM R VSW ++ + D A +F M E N V+W+ +++ + + G
Sbjct: 192 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQ 251
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E LF +M ++VLS L A G +H +V+K G E +F+ N+
Sbjct: 252 HVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNS 311
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF------DN 410
LI LY K G R++F I K++ VSWN++I Y G +EA +F D
Sbjct: 312 LICLYGKHGNVNAARILFLEIKTKNI---VSWNALISSYADLGWCDEAFAIFLQLEKTDE 368
Query: 411 MP--KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
P + N VSWSA+I G+ Q + +F M L+ N T +SVL A +A+L
Sbjct: 369 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 428
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
G+++HG +++ ++ +G L + Y KSG + VF+++ +K+ ISW MV G
Sbjct: 429 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 488
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G + +I F++M K P+ +T ++VL ACSH+GLV +G + F+ M + ++P
Sbjct: 489 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 548
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY C+VD+L R+G L EA + SMP EP++ W +LL+ C+ +KN ++AE ++
Sbjct: 549 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 608
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L E Y+LLSNIYA++GRW D+ VR KGL+K+ G SW++V+ +V+ F
Sbjct: 609 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMF 663
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 227/474 (47%), Gaps = 50/474 (10%)
Query: 67 LGSRKSLEA--NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTAL 124
+GSRK + +V+ ++L V N ++ + G +++A+++F+ M R+ VSW +
Sbjct: 148 MGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTM 207
Query: 125 ISGFMK----HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+SG+ HG E N+++WT+ + + G E ++LF ++ G+
Sbjct: 208 VSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGI 267
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ + ++ F G + G + K GFE ++ V NSLI L K G V+ AR
Sbjct: 268 GATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARI 327
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF------DEMP--ERNEVSWSVMIARYN 292
+F ++ +++VSW ++ + ++G EA IF DE P N VSWS +I +
Sbjct: 328 LFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA 387
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
G EEA LFR+M K N+ + VLS A L AL G +H HV++ ++ ++
Sbjct: 388 SKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNIL 447
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
+ N LI++Y+K G K+G LVF+ I KD ++SWN+M+ GYG++G E A FD M
Sbjct: 448 VGNGLINMYTKSGSFKEGNLVFEKIENKD---LISWNTMVAGYGIHGLGENAIRTFDQMI 504
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
K G P+ TF +VL A + + +G++
Sbjct: 505 K-------------------------------DGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 473 LHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
L K+IK + + D ++G ++ + +V MP + N W ++
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 155/367 (42%), Gaps = 85/367 (23%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GF+ L V N +I + GN+ A+ LF + +N VSW ALIS + G +E+ F
Sbjct: 301 GFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIF 360
Query: 142 ------ERNPF--QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ P NV+SW+A I GF G EAL+LF ++ + VK N VT +S+
Sbjct: 361 LQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSV 420
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CAE+ LG + G + ++ + ++ V N LI + K G VF+++E +D++SW
Sbjct: 421 CAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISW 480
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+ M+A Y G E A R F QM + F+
Sbjct: 481 -------------------------------NTMVAGYGIHGLGENAIRTFDQMIKDGFE 509
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F VLSA S G +GR +
Sbjct: 510 PDGVTFVAVLSAC-----------------------------------SHAGLVAEGREL 534
Query: 374 FDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYL 427
FD + VE + H ++G GL ++EA ++ +MP + N W A+++
Sbjct: 535 FDKMIKEFRVEPQMEHYACMVDLLGRAGL---LQEASKVVKSMPVEPNACVWGALLNSCR 591
Query: 428 EHKQFDL 434
HK ++
Sbjct: 592 MHKNTEV 598
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L R ++ +PN L +H+ ++ G + F++ ++ +Y+
Sbjct: 18 LSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA 77
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
G D + VF+ + ++++ WNS++ +G EEA E++ M K
Sbjct: 78 GFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKL-------- 129
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
G + TF V+ A A + S + + +HG ++++GF
Sbjct: 130 -----------------------GVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGF 166
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+++ +G L Y K G ++ +R+VF+RM ++ +SW MV G A + + +F
Sbjct: 167 QWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRM 226
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
M + PN +T S+L + + G + ++ F M
Sbjct: 227 MGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRM 262
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK---NEISWTVMVRGL 527
+ +H +II G FL + YA G + ++RVF+ P + N + W ++R
Sbjct: 51 QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRAN 110
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGLVDKGLKYFN 576
GY +E++ ++ M K ++ + T V+ AC+ H +V+ G +
Sbjct: 111 VAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQ--- 167
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+N+ ++ M + GR+ +A M +W +++SG
Sbjct: 168 -----WNLHVGNE----LMGMYGKIGRMDDARKVFERMAVR-SCVSWNTMVSG 210
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 50/274 (18%), Positives = 97/274 (35%), Gaps = 106/274 (38%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
I + L + ++ + +L GR +HGH +V+
Sbjct: 414 IASVLSVCAELAALHL---GREIHGH-------------------------------VVR 439
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
L +++V N +IN + G+ +E +F+ + ++ +SW +++G+ HG E
Sbjct: 440 SLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGE----- 494
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
A++ F ++++ G +P+ VTF ++ AC+
Sbjct: 495 --------------------------NAIRTFDQMIKDGFEPDGVTFVAVLSACSH---- 524
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-----WTV 255
G V R +FD+M K V +
Sbjct: 525 -------------------------------AGLVAEGRELFDKMIKEFRVEPQMEHYAC 553
Query: 256 ILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMI 288
++D+ G L EA ++ MP E N W ++
Sbjct: 554 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 345/613 (56%), Gaps = 55/613 (8%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G ++EA+ LF+ MPERN V++ A++SG+++ GR+ ++ +FE P +NV+SWT+ +CG
Sbjct: 90 GFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLA 149
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
G EA +LF V P E++V
Sbjct: 150 NAGRIGEARELF------NVMP---------------------------------ERNVV 170
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
NS++ ++ G+++ AR VF+ M + VSW V++ + E + EAR +FD M +RN
Sbjct: 171 SWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRN 230
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
V+W+ MI+ Y ++G +E + LF++M + N ++ ++ A + ++ +
Sbjct: 231 VVTWTSMISGYCRAGNVQEGYCLFQKMP----ERNVVSWTAMIGGFAWNGFYKEALNSMS 286
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ + N++I+ Y + G+ + + +FD+I +D +SW SMI GY GQ
Sbjct: 287 Y--------NTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDK---ISWTSMINGYFNVGQ 335
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ +A LF+NMP R+ V+W+ ++SG+++++ F +F+EM + G P STFS +L A
Sbjct: 336 IAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGA 395
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ ++A L++G+ H ++K F +D+ L +L YAK G+I + +F +M ++ ISW
Sbjct: 396 AGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISW 455
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ G + G E++ +FE M + PN +T L +L ACSH+GL+++G + F++M
Sbjct: 456 NSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSD 515
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK-TYKNEQIA 639
++ I+P HY C+V++L R+G++ EAE+FI+ +PFEPD W +LL C N +A
Sbjct: 516 VFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVA 575
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
RA K L +L + +V+L NI+AS G+ + +RK M KG+RK GCSW+ ++ +
Sbjct: 576 RRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGE 635
Query: 700 VHFFFQKTDHNPK 712
+ F +P+
Sbjct: 636 PYVFLSGDRIHPQ 648
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 259/577 (44%), Gaps = 102/577 (17%)
Query: 30 DITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVV 89
+ SQ + + R + + G+ T LL + + EA + + + ++V
Sbjct: 50 ECLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVT 109
Query: 90 HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
+N M++ +Q G L +A R F+ MPERN VSWT+L+ G GR+ E+ F P +NV
Sbjct: 110 YNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNV 169
Query: 150 ISWTAAICGFVQNGFSFEALKLF--------------------------LKLLESGVKP- 182
+SW + + G +++G EA ++F ++L G+
Sbjct: 170 VSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDR 229
Query: 183 NEVTFSSICKACAEINDFRLGLSVF---------------GLIFKAGFEK--------HV 219
N VT++S+ + + G +F G GF K +
Sbjct: 230 NVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALNSMSYNT 289
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
CNS+I +++G+++ A+S+FD + RD +SWT +++ + +G + +A +F+ MP+R
Sbjct: 290 QSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDR 349
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+ V+W+VM++ + Q+ EA LF +M P S FSI+L A ++ L G H
Sbjct: 350 DAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFH 409
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
++K E D+ + N+LI +Y+KCGE D +F ++ +D ++SWNSMI G+ +G
Sbjct: 410 CLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRD---LISWNSMIMGFSHHG 466
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
EA VF ML SG PN TF +L
Sbjct: 467 LTSEA-------------------------------LKVFEAMLTSGTHPNSVTFLGILS 495
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY-------AKSGDIESSRRVFDRM 512
A + L +G +L + DVF + Y ++G +E + ++
Sbjct: 496 ACSHAGLLNQGWELFDAM------SDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKL 549
Query: 513 PDKNEIS-WTVMVR----GLAESGYAKESINLFEEME 544
P + +++ W ++ G+ +G A+ + E++
Sbjct: 550 PFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLELD 586
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 165/330 (50%), Gaps = 25/330 (7%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N MIN I+ G LE+AQ LFD +P R+++SWT++I+G+ G++ ++ + F P ++ +
Sbjct: 293 NSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAV 352
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+WT + G VQN EA LF ++ GV P TFS + A + G L+
Sbjct: 353 AWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLL 412
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K FE + + NSLI++ K GE+ A S+F +M RD++SW ++ F G EA
Sbjct: 413 MKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEAL 472
Query: 271 RIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSA 325
++F+ M N V++ +++ + +G + + LF M+ ++ +P + +++
Sbjct: 473 KVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNL 532
Query: 326 LASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCG----ETKDGRLVFDSIVE 379
L R+G A + K+ E D+ I AL+ + CG T R ++E
Sbjct: 533 LG-----RAGKVEEAEEFISKLPFEPDLTIWGALLGV---CGFGMINTGVARRAAKRLLE 584
Query: 380 KD----VAHVVSWN--SMIGGYGLNGQMEE 403
D AHVV N + IG GQ+ +
Sbjct: 585 LDPLNAPAHVVLCNIHASIGQRAEEGQLRK 614
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 329/627 (52%), Gaps = 66/627 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ + NC+I+ + G+++ ++F+GM ERN
Sbjct: 165 DVFIQNCLIHFYAECGHMDHGHKVFEGMSERN---------------------------- 196
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
V+SWT+ ICG+ + EA+ LF +++E+G++P+ VT + ACA++ D +G
Sbjct: 197 ---VVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGER 253
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V I + G + + + N+L+ + +K G +D
Sbjct: 254 VCAYIGELGLKLNKVMVNALVDMYMKCGAID----------------------------- 284
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
A+R+FDE +RN V ++ +++ Y + G EA + +M + +P+ +SA
Sbjct: 285 --AAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 342
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L L G H +V++ G+E I N +ID+Y KCG+ + VFD + K V
Sbjct: 343 SAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV--- 399
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWNS+ G+ NG +E A E+F+ +P+RN V W+ +ISG ++ F+ +F EM
Sbjct: 400 VSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGE 459
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G ++ T + A + + E K +H I K G P D+ L TAL D +A+ GD +S+
Sbjct: 460 GIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSA 519
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+VF++M +++ +WT + +A G + + LF +M + P+ + + VL ACSH
Sbjct: 520 MQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHG 579
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G V++GL F+ ME + I P HY C+VD+L R+G L EA D I SMP EP+ W S
Sbjct: 580 GQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGS 638
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL+ C+ +KN ++A A + + +LA + +VLLSNIYASAG+W D VR + EKG+
Sbjct: 639 LLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGV 698
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
RK G S V+V +H F + +P+
Sbjct: 699 RKVPGSSSVQVNGVIHEFTSGDESHPE 725
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 219/501 (43%), Gaps = 98/501 (19%)
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G+ G EA+ L++++L GV PN TF + C +I F G+ V G + K G E+
Sbjct: 105 GYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEE 164
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V + N LI + G +D VF+ M +R+VVSWT
Sbjct: 165 DVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWT----------------------- 201
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+I Y + P+EA LF +M +P++ V+SA A L+ L G
Sbjct: 202 --------SLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGER 253
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
V A++ ++G++ + + NAL+D+Y KCG + +FD V+++ +V +N+++ Y
Sbjct: 254 VCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRN---LVLYNTILSNYAR 310
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
G EA A+ +EML G P++ T S
Sbjct: 311 QGLAREA-------------------------------LAILDEMLQQGPRPDRVTMLSA 339
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK------------------- 498
+ ASA + L GK HG +I+ G +G + D Y K
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV 399
Query: 499 ------------SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+GD+ES+ VF+++P++N + W M+ GL + +++I LF EM+
Sbjct: 400 VSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGE 459
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I + +T++ + AC + G + K+ ++ I + R T +VDM +R G
Sbjct: 460 GIKADRVTMMGIASACGYLGAPELA-KWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 518
Query: 607 AEDFINSMPFEPDSNAWASLL 627
A N M E D +AW + +
Sbjct: 519 AMQVFNKMT-ERDVSAWTAAI 538
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 244/533 (45%), Gaps = 55/533 (10%)
Query: 27 LLKDITSQNLVIQ-----GRALHGHLIKTGIHKERYLT-TRLLIMYLGSRKSLEAN---- 76
L +D+ QN +I G HGH + G+ + ++ T L+ Y + EA
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFF 221
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHG 132
E+V+ V C+I+A + +L+ +R+ + E N+V AL+ +MK G
Sbjct: 222 EMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCG 281
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
++ + F+ +N++ + + + + G + EAL + ++L+ G +P+ VT S
Sbjct: 282 AIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAIS 341
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
A A++ D G G + + G E S+ N +I + +K G+ ++A VFD M + VVS
Sbjct: 342 ASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVS 401
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W + FI GD+ A +F+++PERN V W+ MI+ Q E+A LFR+M
Sbjct: 402 WNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI 461
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
K + + SA L A VH ++ K GI D+ ++ AL+D++++CG+ +
Sbjct: 462 KADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQ 521
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
VF+ + E+DV+ +W + IG + G E A L
Sbjct: 522 VFNKMTERDVS---AWTAAIGTMAMEGNGEGATGL------------------------- 553
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
FN+ML+ G P+ F VL A + +E+G + + G + +
Sbjct: 554 ------FNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCM 607
Query: 493 TDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV------RGLAESGYAKESIN 538
D ++G + + + MP + N++ W ++ + + + YA E IN
Sbjct: 608 VDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERIN 660
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 9/269 (3%)
Query: 403 EAKELFDNMPKRNDVSW--SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+A ELF + +D + +++I GY ++ ML+ G PN TF VL
Sbjct: 81 KAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSG 140
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+A+ +G +HG ++K+G DVF+ L YA+ G ++ +VF+ M ++N +SW
Sbjct: 141 CTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSW 200
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T ++ G A KE+++LF EM + I P+ +T++ V+ AC+ +D G + +
Sbjct: 201 TSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE 260
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+ +K N +VDM + G + A+ + + + + ++LS Y + +A
Sbjct: 261 L-GLKLNKVMVNALVDMYMKCGAIDAAKRLFDEC-VDRNLVLYNTILS---NYARQGLAR 315
Query: 641 RAVKNLWKLAEE--HPAGYVLLSNIYASA 667
A+ L ++ ++ P +LS I ASA
Sbjct: 316 EALAILDEMLQQGPRPDRVTMLSAISASA 344
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 98/499 (19%), Positives = 169/499 (33%), Gaps = 136/499 (27%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
SLF E T +C++ + G + ++ + G+ + + L+ MY
Sbjct: 218 SLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMY 277
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM----PERNEVSWT 122
+ A + + +LV++N +++ + G EA + D M P + V+
Sbjct: 278 MKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTML 337
Query: 123 ALISG-----------------------------------FMKHGRVE------------ 135
+ IS +MK G+ E
Sbjct: 338 SAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNK 397
Query: 136 ------------------ESMW-YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
ES W F + P +N + W I G VQ +A++LF ++
Sbjct: 398 TVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQ 457
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
G+K + VT I AC + L V I K G + + +L+ + + G+
Sbjct: 458 GEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQ 517
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A VF++M +RDV +WT I G
Sbjct: 518 SAMQVFNKMTERDVSAWT-------------------------------AAIGTMAMEGN 546
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E A LF QM KP+ F VL+A + + G+H+ + + GI +
Sbjct: 547 GEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGC 606
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRN 415
++DL G G + EA +L +MP + N
Sbjct: 607 MVDL----------------------------------LGRAGLLREAFDLIKSMPMEPN 632
Query: 416 DVSWSAIISGYLEHKQFDL 434
DV W ++++ HK ++
Sbjct: 633 DVVWGSLLAACRVHKNVEM 651
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 200/637 (31%), Positives = 333/637 (52%), Gaps = 53/637 (8%)
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A + ++ ++ NCM++ + G L +A+ +FD MP RN VSW AL++G+ + GRV
Sbjct: 55 ARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMPSRNSVSWAALLTGYARRGRV 114
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
E+ F+R P +NV+SW A + G+++NG A +LF ++ ++V++ +
Sbjct: 115 AEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELF----DAMPARDDVSWLMMVSGY 170
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
FR +F +A SVCN+L++ G + A +F RM++ D VSW
Sbjct: 171 MRRKRFREAREIFD---RAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRPDRVSWN 227
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++ + G + ARR+FDEMP ++ VSW+ ++ Y Q+G + A+ +F+ M
Sbjct: 228 AMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDAAWEVFQDMP------ 281
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
++DV N ++ + D +F
Sbjct: 282 ---------------------------------DRDVLAWNTMMGGFVVSDRLDDALRLF 308
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+ ++D+ VSWN+++ GY G M+ A F +M ++++ SW+ +ISGY + L
Sbjct: 309 ADMPDRDL---VSWNTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKDEGALSL 365
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+ +EM G P+++T+S V+ AS+A+L G+ +H IK GF +D + ++L
Sbjct: 366 L----SEMTRGGYRPDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLIS 421
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K G I + +VFD + ++ ++W M+ A G A E++ LF+ M K +P+ T
Sbjct: 422 MYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHAT 481
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
LSVL AC+H G + +G YF SM+ +N+ P HY+C+VD+L RSG + +A +F +
Sbjct: 482 FLSVLSACAHKGYLYEGCHYFRSMQQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKI 541
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P NAW +L S C + + Q+ E KN+ + Y LLSNIYA+ G W A
Sbjct: 542 PSNLQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWSSAA 601
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
VR LM E+GL+K GCSW+E++ V F + +P
Sbjct: 602 TVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDNAHP 638
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 193/381 (50%), Gaps = 41/381 (10%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL Y + EA ++ + ++V N M++ ++ G ++ A+ LFD MP R++VSW
Sbjct: 104 LLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSW 163
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVIS-WTAAICGFVQNGFSFEALKLFLKLLESGV 180
++SG+M+ R E+ F+R P S A + G+ G+ +A +LF ++
Sbjct: 164 LMMVSGYMRRKRFREAREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQ---- 219
Query: 181 KPNEVTFSSICKACAEINDFRLG-LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+P+ V+++++ R G + V +F K +++ L+ G+VD A
Sbjct: 220 RPDRVSWNAMITGYT-----RAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDAAW 274
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ------ 293
VF M RDV++W ++ F+ L +A R+F +MP+R+ VSW+ ++ Y Q
Sbjct: 275 EVFQDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDLVSWNTILQGYIQQGDMDS 334
Query: 294 --------------------SGYPEE-AFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
SGY +E A L +MTR ++P+ + +S+V+S ASL AL
Sbjct: 335 ATTWFRSMLEKDETSWNTVISGYKDEGALSLLSEMTRGGYRPDQATWSVVISVCASLAAL 394
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G VH +K G E D + ++LI +YSKCG + VFD IV++D V+WN+MI
Sbjct: 395 GCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRD---TVTWNAMI 451
Query: 393 GGYGLNGQMEEAKELFDNMPK 413
Y +G EA LFD M K
Sbjct: 452 ATYAYHGLAAEALALFDRMTK 472
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 211/486 (43%), Gaps = 76/486 (15%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
NS I + G V AR VFD M +R+V +W ++ G L +AR +FD MP RN V
Sbjct: 40 NSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMPSRNSV 99
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ ++ Y + G EA LF +M N ++ ++S LR+GM A
Sbjct: 100 SWAALLTGYARRGRVAEARDLFDRMPHR----NVVSWNAMVSGY-----LRNGMVDRARE 150
Query: 343 L-----------------------KIGIEKDVF----------ISNALIDLYSKCGETKD 369
L + +++F + NAL+ Y+ G KD
Sbjct: 151 LFDAMPARDDVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVCNALLSGYAGYGYLKD 210
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+F + D VSWN+MI GY G M+ A+ LFD MP ++ VSW+AI+ GYL++
Sbjct: 211 AEELFGRMQRPD---RVSWNAMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQN 267
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS--LEKGKDLHGKIIKLGFPYDVF 487
D + VF +M P++ + V S L+ L + D+
Sbjct: 268 GDVDAAWEVFQDM------PDRDVLAWNTMMGGFVVSDRLDDALRLFADMPD----RDLV 317
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ Y + GD++S+ F M +K+E SW ++ G + G +++L EM +
Sbjct: 318 SWNTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKDEG----ALSLLSEMTRGG 373
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH----YTCVVDMLSRSGR 603
P++ T V+ C+ + G M I IK H + ++ M S+ G
Sbjct: 374 YRPDQATWSVVISVCASLAALGCG-----RMVHICTIKTGFEHDALVMSSLISMYSKCGL 428
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH--PAGYVLLS 661
++EA + + + D+ W ++++ TY +A A+ ++ ++ P LS
Sbjct: 429 ITEASQVFD-LIVQRDTVTWNAMIA---TYAYHGLAAEALALFDRMTKDRFSPDHATFLS 484
Query: 662 NIYASA 667
+ A A
Sbjct: 485 VLSACA 490
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 182/388 (46%), Gaps = 62/388 (15%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
DV W + G +G ARR+FDEM ERN +W+ M++ ++G +A +F M
Sbjct: 35 DVGRWNSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAM- 93
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
P+ + S AL+ Y++ G
Sbjct: 94 -----PSRNSVSWA---------------------------------ALLTGYARRGRVA 115
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+ R +FD + ++ VVSWN+M+ GY NG ++ A+ELFD MP R+DVSW ++SGY+
Sbjct: 116 EARDLFDRMPHRN---VVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSWLMMVSGYMR 172
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
K+F +F+ + P S +++L A L+ ++L G++ + D
Sbjct: 173 RKRFREAREIFDR---APSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRP----DRVS 225
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
A+ Y ++G ++ +RR+FD MP K+ +SWT +VRG ++G + +F++M +
Sbjct: 226 WNAMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDAAWEVFQDMPDRDV 285
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
L +++ S +D L+ F M P ++ + ++ + G + A
Sbjct: 286 ----LAWNTMMGGFVVSDRLDDALRLFADM-PDRDLVS----WNTILQGYIQQGDMDSAT 336
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNE 636
+ SM E D +W +++SG YK+E
Sbjct: 337 TWFRSM-LEKDETSWNTVISG---YKDE 360
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 156/328 (47%), Gaps = 18/328 (5%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T ++ YL + A E+ +D+ D++ N M+ + L++A RLF MP+R+ V
Sbjct: 258 TAIVRGYLQNGDVDAAWEVFQDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDLV 317
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW ++ G+++ G ++ + +F ++ SW I G+ G AL L ++ G
Sbjct: 318 SWNTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKDEG----ALSLLSEMTRGG 373
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+P++ T+S + CA + G V K GFE V +SLI++ K G + A
Sbjct: 374 YRPDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEAS 433
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSG 295
VFD + +RD V+W ++ + G EA +FD M + + ++ +++ G
Sbjct: 434 QVFDLIVQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKG 493
Query: 296 YPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
Y E FR M + ++ P + +S ++ L RSG A+ I ++ I
Sbjct: 494 YLYEGCHYFRSMQQDWNLVPRSDHYSCMVDLLG-----RSGFVHQAYNFTRKIPSNLQI- 547
Query: 355 NALIDLYSKC---GETKDGRLVFDSIVE 379
NA L+S C G+ + G LV ++++
Sbjct: 548 NAWETLFSSCNAHGDIQLGELVAKNVLQ 575
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 201/608 (33%), Positives = 331/608 (54%), Gaps = 83/608 (13%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGF 159
G + +A+RLFDGMP+R+ VSWTA+++ + + G ++E+ F+R + +NV++WTA + G+
Sbjct: 55 GRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGY 114
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ EA LF + E++V
Sbjct: 115 ARARRVDEAEALF---------------------------------------EGMAERNV 135
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
N+++ +G V+ A ++F+RM RD SW ++L + G L AR++F+ MP R
Sbjct: 136 VSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERMPVR 195
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+ +SW+ MI+ ++G ++A+ LF M
Sbjct: 196 DVMSWTTMISGLARNGSVDDAWVLFDAMP------------------------------- 224
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
E++V NA+I Y++ ++ +F + +DVA SWN MI G+ N
Sbjct: 225 --------ERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVA---SWNIMITGFIQNK 273
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
++ A++LFD MPKRN ++W+ +++GYL+ Q ++ +FN ML+ G PN+ TF L
Sbjct: 274 DLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLD 333
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A +++A+L +G+ +H I K +D F+ + L + YAK G+I +R VFD +K+ IS
Sbjct: 334 ACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLIS 393
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W ++ A G+ E+++L++ M++ PN+ T + +L ACSH+GLVD+GLK F SM
Sbjct: 394 WNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMV 453
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA-WASLLSGCKTYKNEQI 638
+I HYTC+VD+ SR+GRL +A+ I+ +P S+ W++LL GC ++ NE I
Sbjct: 454 KDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESI 513
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
+ A K+L + ++ Y LL NIYASAG+W +A +R M +GL+K GCSW+EV N
Sbjct: 514 GDLAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVAN 573
Query: 699 QVHFFFQK 706
+VH F +
Sbjct: 574 KVHVFVSR 581
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 24/278 (8%)
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V HV N + G++ +A+ LFD MP R+ VSW+A+++ Y +F+
Sbjct: 38 VNHVQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR 97
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
N T++++L A +++ + L + + +V + + Y G
Sbjct: 98 ---PDARRNVVTWTALLSGYARARRVDEAEALFEGMAE----RNVVSWNTMLEAYTAVGR 150
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+E + +F+RMP ++ SW +++ GL SG + + +FE M + ++ +++
Sbjct: 151 VEDASALFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDV----MSWTTMISG 206
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
+ +G VD F++M P N+ + ++ +R+ R+ EA D MP D
Sbjct: 207 LARNGSVDDAWVLFDAM-PERNVVS----WNAMISGYARNHRIEEALDLFTKMPIR-DVA 260
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
+W +++G I + +K+ +L +E P V+
Sbjct: 261 SWNIMITGF-------IQNKDLKSARQLFDEMPKRNVI 291
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 325/595 (54%), Gaps = 18/595 (3%)
Query: 124 LISGFMKHGRVEESMWYFERNP---FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
++S + G V ++ FE +P F N++ W + + V +G+ EAL+++ ++ + GV
Sbjct: 72 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 131
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ TF + +ACA + +L SV G + + GF+ ++ V N L+ + K+G +D AR
Sbjct: 132 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 191
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGY 296
VF+RM R VSW ++ + D A +F M E N V+W+ +++ + + G
Sbjct: 192 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQ 251
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E LF +M ++VLS L A G +H +V+K G E +F+ N+
Sbjct: 252 HVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNS 311
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF------DN 410
LI LY K G R++F I K++ VSWN++I Y G +EA +F D
Sbjct: 312 LICLYGKHGNVNAARILFLEIKTKNI---VSWNALISSYADLGWCDEAFAIFLQLEKTDE 368
Query: 411 MP--KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
P + N VSWSA+I G+ Q + +F M L+ N T +SVL A +A+L
Sbjct: 369 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 428
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
G+++HG +++ ++ +G L + Y KSG + VF+++ +K+ ISW MV G
Sbjct: 429 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 488
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G + +I F++M K P+ +T ++VL ACSH+GLV +G + F+ M + ++P
Sbjct: 489 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 548
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY C+VD+L R+G L EA + SMP EP++ W +LL+ C+ +KN ++AE ++
Sbjct: 549 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 608
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L E Y+LLSNIYA++GRW D+ VR KGL+K+ G SW++V+ +V+ F
Sbjct: 609 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMF 663
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 227/474 (47%), Gaps = 50/474 (10%)
Query: 67 LGSRKSLEA--NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTAL 124
+GSRK + +V+ ++L V N ++ + G +++A+++F+ M R+ VSW +
Sbjct: 148 MGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTM 207
Query: 125 ISGFMK----HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+SG+ HG E N+++WT+ + + G E ++LF ++ G+
Sbjct: 208 VSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGI 267
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ + ++ F G + G + K GFE ++ V NSLI L K G V+ AR
Sbjct: 268 GATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARI 327
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF------DEMP--ERNEVSWSVMIARYN 292
+F ++ +++VSW ++ + ++G EA IF DE P N VSWS +I +
Sbjct: 328 LFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA 387
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
G EEA LFR+M K N+ + VLS A L AL G +H HV++ ++ ++
Sbjct: 388 SKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNIL 447
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
+ N LI++Y+K G K+G LVF+ I KD ++SWN+M+ GYG++G E A FD M
Sbjct: 448 VGNGLINMYTKSGSFKEGNLVFEKIENKD---LISWNTMVAGYGIHGLGENAIRTFDQMI 504
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
K G P+ TF +VL A + + +G++
Sbjct: 505 K-------------------------------DGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 473 LHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
L K+IK + + D ++G ++ + +V MP + N W ++
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 155/367 (42%), Gaps = 85/367 (23%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GF+ L V N +I + GN+ A+ LF + +N VSW ALIS + G +E+ F
Sbjct: 301 GFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIF 360
Query: 142 ------ERNPF--QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ P NV+SW+A I GF G EAL+LF ++ + VK N VT +S+
Sbjct: 361 LQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSV 420
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CAE+ LG + G + ++ + ++ V N LI + K G VF+++E +D++SW
Sbjct: 421 CAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISW 480
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+ M+A Y G E A R F QM + F+
Sbjct: 481 -------------------------------NTMVAGYGIHGLGENAIRTFDQMIKDGFE 509
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F VLSA S G +GR +
Sbjct: 510 PDGVTFVAVLSAC-----------------------------------SHAGLVAEGREL 534
Query: 374 FDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYL 427
FD + VE + H ++G GL ++EA ++ +MP + N W A+++
Sbjct: 535 FDKMIKEFRVEPQMEHYACMVDLLGRAGL---LQEASKVVKSMPVEPNACVWGALLNSCR 591
Query: 428 EHKQFDL 434
HK ++
Sbjct: 592 MHKNTEV 598
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L R ++ +PN L +H+ ++ G + F++ ++ +Y+
Sbjct: 18 LSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA 77
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
G D + VF+ + ++++ WNS++ +G EEA E++ M K
Sbjct: 78 GFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKL-------- 129
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
G + TF V+ A A + S + + +HG ++++GF
Sbjct: 130 -----------------------GVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGF 166
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+++ +G L Y K G ++ +R+VF+RM ++ +SW MV G A + + +F
Sbjct: 167 QWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRM 226
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
M + PN +T S+L + + G + ++ F M
Sbjct: 227 MGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRM 262
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/274 (18%), Positives = 97/274 (35%), Gaps = 106/274 (38%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
I + L + ++ + +L GR +HGH +V+
Sbjct: 414 IASVLSVCAELAALHL---GREIHGH-------------------------------VVR 439
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
L +++V N +IN + G+ +E +F+ + ++ +SW +++G+ HG E
Sbjct: 440 SLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGE----- 494
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
A++ F ++++ G +P+ VTF ++ AC+
Sbjct: 495 --------------------------NAIRTFDQMIKDGFEPDGVTFVAVLSACSH---- 524
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-----WTV 255
G V R +FD+M K V +
Sbjct: 525 -------------------------------AGLVAEGRELFDKMIKEFRVEPQMEHYAC 553
Query: 256 ILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMI 288
++D+ G L EA ++ MP E N W ++
Sbjct: 554 MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587
>gi|325260825|gb|ADZ04643.1| hypothetical protein [Oryza punctata]
Length = 674
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 201/606 (33%), Positives = 324/606 (53%), Gaps = 34/606 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ A + G L +AQ LFD MP R+ +SWTAL++ + G + + F+ P +N
Sbjct: 42 NALLTAYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + +++ A LF K+ N V++ +I A+ R V+ +
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAK----NAVSYGAIISGLAKAGMLREAELVYEEM 157
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ + S N+L+ L++GE+ +A VF+ M RDV+SW+ ++D + G + EAR
Sbjct: 158 PQQWRDPVGS--NALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEAR 215
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
R+FD MPER+ VSW+ MI Y + G + LF M R + N + S+VL A A
Sbjct: 216 RVFDAMPERSVVSWTSMIRGYVKRGMCSDGLLLFLNMRREGVQVNATTLSVVLDACAGAS 275
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-------- 382
R G+ +H ++ +G E D+F+ +++I +YS+ G D + F+ + +KD+
Sbjct: 276 LAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSLIT 335
Query: 383 ----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
AHV VSW SM+ G+ G M E+ ELF+ MP ++ V+W+AI
Sbjct: 336 GYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDVVAWTAI 395
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
IS ++ + + F M G PN TFS +L A AS+A L +G+ H I +G+
Sbjct: 396 ISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQGRQAHAYSINMGW 455
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+D + T+L YAK G + + VF + + + I+ M+ + G+A++++ LF +
Sbjct: 456 VFDSAVHTSLISMYAKCGRLAEAHHVFSSISNPSLIAINSMITAFVQHGFAEDALKLFTK 515
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ PN +T L +L C+ +G V +G YF SM P+Y ++PN HYTC+VD+L R+G
Sbjct: 516 MQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAG 575
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L+EA + INSMP S+AWA+LLS + N A+ A + L + Y +LS
Sbjct: 576 LLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSK 635
Query: 663 IYASAG 668
+++SAG
Sbjct: 636 MFSSAG 641
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 236/512 (46%), Gaps = 68/512 (13%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N ++ ++ G L A R+F+GM R+ +SW+A++ G KHG V E+ F+ P
Sbjct: 163 DPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMP 222
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SWT+ I G+V+ G + L LFL + GV+ N T S + ACA + R G+
Sbjct: 223 ERSVVSWTSMIRGYVKRGMCSDGLLLFLNMRREGVQVNATTLSVVLDACAGASLAREGIQ 282
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ LI GFE + + +S+I + + G + A+ F+ M+++D+VSW ++ +++
Sbjct: 283 IHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSLITGYVQHDM 342
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ------------------- 306
+ EA +F MP+++ VSW+ M+ + G+ E+ LF Q
Sbjct: 343 VEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDVVAWTAIISSFITN 402
Query: 307 ------------MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
M++ KPNT FS +LSALASL L G HA+ + +G D +
Sbjct: 403 GDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH 462
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+LI +Y+KCG + VF SI +++ NSMI + +G E+A +LF M
Sbjct: 463 TSLISMYAKCGRLAEAHHVFSSISNPS---LIAINSMITAFVQHGFAEDALKLFTKMQN- 518
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+G PN TF +L A +++G +
Sbjct: 519 ------------------------------AGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 475 GKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLA-ESG 531
+ + G + T + D ++G + + + + MP + +W ++ + S
Sbjct: 549 ESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSN 608
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACS 563
A I + +EK T+LS +F+ +
Sbjct: 609 LAFAKIAAQKLLEKDPYDATAYTVLSKMFSSA 640
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 177/384 (46%), Gaps = 34/384 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +L +L +G +H +I G + +L ++IMY +A +
Sbjct: 263 TLSVVLDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCM 322
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
D+V N +I +Q +EEA LF MP+++ VSWT+++ GF G + ES+ FE
Sbjct: 323 QQKDIVSWNSLITGYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFE 382
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P ++V++WTA I F+ NG A++ F ++ + G KPN +TFS + A A +
Sbjct: 383 QMPVKDVVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLA---- 438
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
+ G + H S+ MG VFD T ++ ++ +
Sbjct: 439 -------MLNQGRQAH--------AYSINMGW------VFDSAVH------TSLISMYAK 471
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G L EA +F + + ++ + MI + Q G+ E+A +LF +M +KPN F +
Sbjct: 472 CGRLAEAHHVFSSISNPSLIAINSMITAFVQHGFAEDALKLFTKMQNAGYKPNHVTFLGI 531
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L+ A ++ G + + + G+E + ++DL + G + + +S+ + D
Sbjct: 532 LTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQND 591
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAK 405
H +W +++ L+ + AK
Sbjct: 592 --HSDAWAALLSASSLHSNLAFAK 613
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 328/641 (51%), Gaps = 49/641 (7%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F V C ++++ G+ A G N AL++ + + G + ++ F+
Sbjct: 130 FPFVFKACGEISSVRCGDSSHALSRVTGFMS-NVFVGNALVAMYSRCGSLSDARKVFDEM 188
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLG 203
P +V+SW + I + + G AL++F K+ E G +P+++T ++ CA + LG
Sbjct: 189 PVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLG 248
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
G + +++ V N L+ + K G +D A +VF M +DVVSW ++ + ++
Sbjct: 249 KQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQI 308
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
G +A R+F++M E + V+WS I+ Y Q G EA + RQM KPN
Sbjct: 309 GRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIE-------KDVFISNALIDLYSKCGETKDGRL 372
VLS AS+ AL G +H + +K ++ + + N LID+Y+KC + R
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARA 428
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+FDS+ K +R+ V+W+ +I GY +H
Sbjct: 429 MFDSLSPK--------------------------------ERDVVTWTVMIGGYSQHGDA 456
Query: 433 DLVFAVFNEMLLSG--EIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLG 489
+ + +EM PN T S L A AS+A+L GK +H ++ +F+
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVS 516
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
L D YAK GDI +R VFD M +KNE++WT ++ G GY +E++ +FEEM +
Sbjct: 517 NCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFK 576
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
+ +T+L VL+ACSHSG++D+G++YFN M+ + + P HY C+VD+L R+GRL+ A
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALR 636
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
I MP EP W +LLS C+ + ++ E A K + +LA + Y LLSN+YA+AGR
Sbjct: 637 LIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGR 696
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVE-VRNQVHFFFQKTDH 709
W D +R LM KG++K GCSWVE ++ FF H
Sbjct: 697 WKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTH 737
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 184/388 (47%), Gaps = 77/388 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ HG + + + + ++ L+ MY EAN + ++ D+V N M+ Q
Sbjct: 248 GKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQ 307
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
G E+A RLF+ M E + V+W+A IS
Sbjct: 308 IGRFEDAVRLFEQMQEEKIKMDVVTWSAAIS----------------------------- 338
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG--LSVFGLIF-- 211
G+ Q G +EAL + ++L SG+KPNEVT S+ CA + G + + + +
Sbjct: 339 --GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396
Query: 212 ---KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM--EKRDVVSWTVILDVFIEMGDL 266
K G V N LI + K +VD+AR++FD + ++RDVV+WTV++ + + GD
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A + EM E + + +PN S L A
Sbjct: 457 NKALELLSEMFEEDCQT-----------------------------RPNAFTISCALVAC 487
Query: 327 ASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
ASL AL G +HA+ L+ +F+SN LID+Y+KCG+ D RLVFD+++EK+
Sbjct: 488 ASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKN---E 544
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPK 413
V+W S++ GYG++G EEA +F+ M +
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFEEMRR 572
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 220/715 (30%), Positives = 350/715 (48%), Gaps = 107/715 (14%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ALH +IK+ Y+ L+ +Y ++ EA + + + D+V NC+IN
Sbjct: 24 KGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYS 82
Query: 99 QWGN------LEEAQRL-----------FDGM------------------------PERN 117
Q G +E QR+ F G+ R+
Sbjct: 83 QHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRD 142
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
++L++ + K G E+ F+ P +N +SW I G+ + EAL LF +
Sbjct: 143 VFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRR 202
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
NE F+S+ A G + + K G VSV N+L+T+ K G +D
Sbjct: 203 EEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLD- 261
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
+A + F+ ++N ++WS MI Y QSG
Sbjct: 262 ------------------------------DALQTFETSSDKNSITWSAMITGYAQSGDS 291
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
++A +LF M +P+ F V++A + L A G VH ++LK+G E +++ AL
Sbjct: 292 DKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTAL 351
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+Y+KC D R FD + E D +V W SMIGGY NG+ E+A L+ M
Sbjct: 352 VDMYAKCSSIVDARKGFDYLQEPD---IVLWTSMIGGYVQNGENEDALSLYGRME----- 403
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+ G +PN+ T +SVL A +S+A+LE+GK +H +
Sbjct: 404 --------------------------MEGILPNELTMASVLKACSSLAALEQGKQIHART 437
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+K GF +V +G+AL+ YAK G ++ VF RMP ++ ISW M+ GL+++G KE++
Sbjct: 438 VKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEAL 497
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LFEEM+ P+ +T +++L ACSH GLV++G YF M + + P HY C+VD+
Sbjct: 498 ELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDI 557
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
LSR+G+L EA +F S + W +L C+ Y+N ++ A + L +L + + Y
Sbjct: 558 LSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAY 617
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VLLS+IY++ GRW D VR++M +G+ K GCSW+E+++ VH F K +P+
Sbjct: 618 VLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQ 672
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 56/340 (16%)
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F L ++L+ G +HA ++K V+I+N+L++LY+KC
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQ-------- 54
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH--KQ 431
++ EAK +F+ + ++ VSW+ II+GY +H
Sbjct: 55 --------------------------RLREAKFVFERIQNKDVVSWNCIINGYSQHGPSG 88
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
V +F M PN TF+ V A++++ G+ H IK+ DVF+G++
Sbjct: 89 SSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSS 148
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L + Y K+G +R+VFD MP++N +SW M+ G A A E++ LF M + N
Sbjct: 149 LMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGEN 208
Query: 552 ELTILSVLFACSHSGLVDKG-----LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
E SVL A + LV+ G + N + I ++ +V M ++ G L
Sbjct: 209 EFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVG------NALVTMYAKCGSL-- 260
Query: 607 AEDFINSMPFEPDSNA--WASLLSGCKTYKNEQIAERAVK 644
+D + + D N+ W+++++G Y +++A+K
Sbjct: 261 -DDALQTFETSSDKNSITWSAMITG---YAQSGDSDKALK 296
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 160/387 (41%), Gaps = 77/387 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY--LGS-RKSLEANEIVKDLN 83
+L +T LV G+ +H +K G+ + L+ MY GS +L+ E D N
Sbjct: 215 VLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKN 274
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGM------PER-------NEVS-----W---- 121
+ + MI Q G+ ++A +LF M P N S W
Sbjct: 275 S---ITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQ 331
Query: 122 -----------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
TAL+ + K + ++ F+ +++ WT+ I G+VQNG
Sbjct: 332 VHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGE 391
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
+ +AL L+ ++ G+ PNE+T +S+ KAC+ + G + K GF V + ++
Sbjct: 392 NEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSA 451
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L T+ K G + VF RM RDV+SW
Sbjct: 452 LSTMYAKCGCLKDGTLVFRRMPARDVISW------------------------------- 480
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL- 343
+ MI+ +Q+G +EA LF +M KP+ F +LSA + + + G +
Sbjct: 481 NAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFD 540
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDG 370
+ G++ V ++D+ S+ G+ K+
Sbjct: 541 EFGMDPRVEHYACMVDILSRAGKLKEA 567
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 11/212 (5%)
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
+P+ +F + L SL+KGK LH +IIK V++ +L + YAK + ++
Sbjct: 3 LPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKF 61
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKES--INLFEEMEKTSITPNELTILSVLFACSHS 565
VF+R+ +K+ +SW ++ G ++ G + S + LF+ M + PN T V A S
Sbjct: 62 VFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST- 120
Query: 566 GLVD-KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
LVD G + +++ + + + +++M ++G EA ++MP E +S +WA
Sbjct: 121 -LVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMP-ERNSVSWA 178
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+++SG Y ++++A A+ L++L G
Sbjct: 179 TMISG---YASQKLAAEAL-GLFRLMRREEEG 206
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 214/681 (31%), Positives = 342/681 (50%), Gaps = 75/681 (11%)
Query: 23 TCLCLLKDITSQNLVIQGRAL-----HGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
+C L D+ S +V G +G ++ + ER+ + ++ R+ E
Sbjct: 105 SCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADA--VALHHDMRRRRPCPE 162
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
D L + C+ +A +G + G + +L+ + K +E +
Sbjct: 163 AQDDFV-LSLALKACIRSAEYSYGRSLHCDAIKVGGAD--GFVMNSLVDMYAKAEDLECA 219
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
FER P +NV+SWT+ I G VQNGF+ + L LF K+ + V P+E T +++ AC+ +
Sbjct: 220 RKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSAL 279
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
G + G + K G + NS I+ +L L
Sbjct: 280 FGLHQGRWMHGSVIKQGL-----MSNSFISAAL--------------------------L 308
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
D++++ G+L AR +FDE+ + V W+ MI Y Q+G P +A RLF + PN+
Sbjct: 309 DMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSV 368
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ VLSA A L+ L G +H +K+G+ + + NAL+D+Y+KC
Sbjct: 369 TTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQA----------- 417
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ EA +F + ++ V+W+++ISGY E+ D
Sbjct: 418 -----------------------VSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALM 454
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+F +M L G P+ + + L AS + L GK +HG +K F ++++ TAL + Y
Sbjct: 455 LFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYN 514
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K GD+ S+RRVFD M D+N ++W M+ G G + SI+LF EM K + PN++ S
Sbjct: 515 KCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTS 574
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
+L CSHSG+V G +YF+SM +NI P+ +HY C+VD+L+R+G L +A +FI++MP +
Sbjct: 575 ILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQ 634
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
D++ W + L GC+ + Q AE A+K + L E P YVL+SN+Y S G W ++ +R
Sbjct: 635 ADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIR 694
Query: 678 KLMTEKGLRKSGGCSWVEVRN 698
+ M EKGL K GCS V N
Sbjct: 695 RWMQEKGLVKLPGCSSVGHEN 715
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 174/387 (44%), Gaps = 56/387 (14%)
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T +L + +GDL AR +FD P + S+ M+ Q+ +A L M R
Sbjct: 101 TKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPC 160
Query: 314 PNTS---CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P S+ L A G +H +K+G D F+ N+L+D+Y+K + +
Sbjct: 161 PEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECA 219
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
R VF+ I +++ VVSW SMI G NG + LF+ M + N
Sbjct: 220 RKVFERIPDRN---VVSWTSMISGCVQNGFASDGLLLFNKMRQDN--------------- 261
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
P++ T ++V+ A +++ L +G+ +HG +IK G + F+
Sbjct: 262 ----------------VPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISA 305
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D Y K G+++ +R VFD + + + WT M+ G ++G +++ LF + +I P
Sbjct: 306 ALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAP 365
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPI--------YNIKPNGRHYTCVVDMLSRSG 602
N +T +VL A + + L S+ + YN+ N +VDM ++
Sbjct: 366 NSVTTATVLSASAQL----RDLSLGKSIHGLAVKLGLVEYNVVGNA-----LVDMYAKCQ 416
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSG 629
+SEA+ + D AW S++SG
Sbjct: 417 AVSEADRIFGRIS-NKDVVAWNSMISG 442
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 20/231 (8%)
Query: 412 PKRNDVSWSAIISGYLEHKQF----DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
PKRN + + YL H F L G + + +L S +L
Sbjct: 19 PKRNIANQ---LRNYLAHALFVSAAATRRRRRRRALCVGNLARALSAGDLLRLLPSCGTL 75
Query: 468 EKGKDLHGKIIKLGFPYDVFLG-----TALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
+ LH ++ L P + LG T L YA GD+ S+R VFD P + S+
Sbjct: 76 LSLRVLHARL--LTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGA 133
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITP---NELTILSVLFACSHSGLVDKGLKYFNSME 579
M+ L ++ +++ L +M + P ++ + L AC S G +
Sbjct: 134 MLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSLH--CD 191
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
I +G +VDM +++ L A +P + + +W S++SGC
Sbjct: 192 AIKVGGADGFVMNSLVDMYAKAEDLECARKVFERIP-DRNVVSWTSMISGC 241
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 340/642 (52%), Gaps = 22/642 (3%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP---ERNEVSWT 122
YL + K EA ++ + DL MI + G +E+A+ LFD +P + W
Sbjct: 47 YLHNGKFDEAYKLFVIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWN 106
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A+ISG++K GRV E+ F+ P +N+ISW + + G+ QN L+ F ++ E V
Sbjct: 107 AMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDV-- 164
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
V+++ + ++ D F K V++ + + G + +R +F
Sbjct: 165 --VSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFA----RNGNILESRRLF 218
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D+M R++VSW ++ +++ ++ EA R+F+EMPER+ VSW+ MI Y + G +EA
Sbjct: 219 DQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARE 278
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L +M + T+ S + +A R +IG DV NA+I Y+
Sbjct: 279 LLNEMPYRNIGAQTAMISGYIQCNKVDEARR-------FFDEIGTW-DVVCWNAMIAGYA 330
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
G + + +V KD+ V+WN+MI Y GQM+ A ++F+ M +R+ VSW+++
Sbjct: 331 HHGRINEALCLSKRMVNKDM---VTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSL 387
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I+G++ + Q F M G+ P++ +F+ L + A++A+L+ G LH ++K G+
Sbjct: 388 IAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGY 447
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+ + AL YAK G I + VF+ + + ISW ++ G A +GY KE++ LFEE
Sbjct: 448 LNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEE 507
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M + P+E+T + +L AC+H+G+VD GLK F M +Y I+P HY C+VD+L R G
Sbjct: 508 MASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVG 567
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
RL EA + + M + + W +LL C+ + N ++ A L + + YVLLSN
Sbjct: 568 RLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSN 627
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
I+A A RW + VR LM K GCSWVEVRNQVH F
Sbjct: 628 IHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFL 669
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 199/391 (50%), Gaps = 30/391 (7%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
+L Y +RK E +++ D+V N M++ IQ G+L+ A + F + N VSW
Sbjct: 139 MLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSW 198
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFL-------- 173
++SGF ++G + ES F++ P +N++SW A I +VQ EA +LF
Sbjct: 199 VTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSV 258
Query: 174 -------------KLLESGVKPNEVTFSSICKACAEINDFRLGLSV--FGLIFKAGFEKH 218
KL E+ NE+ + +I A I+ + V F
Sbjct: 259 SWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWD 318
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V N++I G ++ A + RM +D+V+W ++ + ++G + A +IF+EM E
Sbjct: 319 VVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGE 378
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
R+ VSW+ +IA + +G +A + F M KP+ F+ LS+ A++ AL+ G +
Sbjct: 379 RDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQL 438
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H V+K G + ++NALI +Y+KCG + LVF+ I D V+SWNS+IGGY +N
Sbjct: 439 HQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHAD---VISWNSLIGGYAIN 495
Query: 399 GQMEEAKELFDNMPKR----NDVSWSAIISG 425
G +EA +LF+ M ++V++ I+S
Sbjct: 496 GYGKEALKLFEEMASEGMAPDEVTFIGILSA 526
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 236/495 (47%), Gaps = 64/495 (12%)
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
EK+ NS+I++ K G ++ AR++FD+M +R++VSW ++ ++ G EA ++F
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA---------- 325
MP R+ SW++MI Y ++G E+A LF + S++ +C++ ++S
Sbjct: 63 MPRRDLFSWTLMITCYTRNGEVEKARELFDSLP-CSYRKGVACWNAMISGYVKKGRVNEA 121
Query: 326 -----------LASLKALRSGMHVHAHVLKIGI-------EKDVFISNALIDLYSKCGET 367
L S ++ +G + +++G+ E+DV N ++D + + G+
Sbjct: 122 KRLFDEMPVKNLISWNSMLAG-YTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDL 180
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
F E +VVSW +M+ G+ NG + E++ LFD MP RN VSW+A+IS Y+
Sbjct: 181 DSAWKFFQ---ETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYV 237
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFS--SVLCASASVASLEKGKDLHGKIIKLGFPY- 484
+ + D +F EM P + + S +++ + L++ ++L ++ PY
Sbjct: 238 QRCEIDEASRLFEEM------PERDSVSWTTMINGYVRIGKLDEARELLNEM-----PYR 286
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
++ TA+ Y + ++ +RR FD + + + W M+ G A G E++ L + M
Sbjct: 287 NIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRM- 345
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + +T +++ + G +D+ +K F M + N + + + L
Sbjct: 346 ---VNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWN----SLIAGFMLNGQNL 398
Query: 605 SEAEDF--INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
+ F + +PD ++A LS C T Q+ + + + K Y++++N
Sbjct: 399 DALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGY---LNYLVVNN 455
Query: 663 ----IYASAGRWIDA 673
+YA GR ++A
Sbjct: 456 ALITMYAKCGRILEA 470
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 220/471 (46%), Gaps = 46/471 (9%)
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M +++ V++ ++ V+ + G + AR +FD+MP RN VSW+ M++ Y +G +EA++LF
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 305 RQMTR---YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
M R +S+ +C++ + + S L K V NA+I Y
Sbjct: 61 VIMPRRDLFSWTLMITCYTRNGEVEKARELFDS--------LPCSYRKGVACWNAMISGY 112
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
K G + + +FD E V +++SWNSM+ GY N +M E F+ M +R+ VSW+
Sbjct: 113 VKKGRVNEAKRLFD---EMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNL 169
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
++ G+++ D + F E + PN ++ ++L A ++ + + L ++
Sbjct: 170 MVDGFIQVGDLDSAWKFFQET----QKPNVVSWVTMLSGFARNGNILESRRLFDQMPS-- 223
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++ A+ Y + +I+ + R+F+ MP+++ +SWT M+ G G E+ L
Sbjct: 224 --RNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLN 281
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM +I + ++S C+ VD+ ++F+ + +++ + ++ +
Sbjct: 282 EMPYRNIGA-QTAMISGYIQCNK---VDEARRFFDEI-GTWDVVC----WNAMIAGYAHH 332
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GR++EA M D W +++S Y +RAVK ++ E + L
Sbjct: 333 GRINEALCLSKRM-VNKDMVTWNTMIS---CYAQVGQMDRAVKIFEEMGERDLVSWNSLI 388
Query: 662 NIYASAGRWIDAMNVRKLMTEK-----------GLRKSGGCSWVEVRNQVH 701
+ G+ +DA+ LM + GL + ++V NQ+H
Sbjct: 389 AGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLH 439
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 163/325 (50%), Gaps = 8/325 (2%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T ++ Y+ K EA ++ +D+V N MI G + EA L M ++ V
Sbjct: 292 TAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMV 351
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+W +IS + + G+++ ++ FE ++++SW + I GF+ NG + +ALK F + G
Sbjct: 352 TWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEG 411
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
KP++++F+ +CA I ++G + ++ K G+ ++ V N+LIT+ K G + A
Sbjct: 412 KKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAG 471
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSG 295
VF+ + DV+SW ++ + G EA ++F+EM +EV++ +++ N +G
Sbjct: 472 LVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAG 531
Query: 296 YPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
+ +LF+ M++ Y+ +P ++ ++ L + L + V + ++ +
Sbjct: 532 MVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEI---VRGMKVKATAGVW 588
Query: 355 NALIDLYSKCGETKDGRLVFDSIVE 379
AL+ G + GRL + E
Sbjct: 589 GALLGACRAHGNLELGRLAAHKLSE 613
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 198/637 (31%), Positives = 336/637 (52%), Gaps = 77/637 (12%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
+ N+ AL+ + K G V +++ F N +S+TA + G Q G +AL+LF +
Sbjct: 173 DANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFAR 232
Query: 175 LLESGVKPNEVTFSSICKACAEI--------NDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+ SGV + V+ SS+ ACA+ FRLG ++ L+ + GF V NSLI
Sbjct: 233 MCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLI 292
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG---------------------- 264
+ K E+D A VF+ + +VSW +++ F + G
Sbjct: 293 DMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEV 352
Query: 265 -------------DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
D+ AR +FD++ + +W+ +++ Y Q ++ LFR+M +
Sbjct: 353 TYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQN 412
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+P+ + +++LS+ + L L G VH+ ++ + D+F+++ L+D+YSKCG
Sbjct: 413 VQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCG------ 466
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
Q+ A+ +F+ M +R+ V W++IISG H
Sbjct: 467 ----------------------------QIGIARSIFNKMTERDVVCWNSIISGLTIHSL 498
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
F F +M +G +P +S+++S++ + + ++S+ G+ +H +++K G+ +V++G+A
Sbjct: 499 NKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSA 558
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D YAK G+++ +R FD M KN ++W M+ G A++G +++ LFE M T P+
Sbjct: 559 LIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPD 618
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+T ++VL CSHSGLVDK + +FNSME Y I P HYTC++D L R+GR E E I
Sbjct: 619 AVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALI 678
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
+ MP + D W LL+ C + N ++ + A ++L+++ ++P+ YVLLSNIYAS GR
Sbjct: 679 HKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHG 738
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
DA VR LM+ +G+ K G SW++ ++ V F D
Sbjct: 739 DASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVADD 775
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/636 (24%), Positives = 282/636 (44%), Gaps = 118/636 (18%)
Query: 55 ERYLTTRLLIMYLGSRKSLEANEIV--KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG 112
+ +L RL+ +Y SR L + ++ + L + +N ++A + G+L+ A+ L G
Sbjct: 42 DTFLANRLVELY--SRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGG 99
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
MP RN VSW +IS R+P G EA++++
Sbjct: 100 MPRRNAVSWNTVISAL-------------ARSP-----------------GDGGEAVEMY 129
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
++ G+ P T +S+ AC + G G+ K G + + V N+L+ + K
Sbjct: 130 GRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKC 189
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
G V G+A R+F M NEVS++ M+
Sbjct: 190 GSV-------------------------------GDAVRLFYGMARPNEVSFTAMMGGLA 218
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS--------LKALRSGMHVHAHVLK 344
Q+G ++A RLF +M R + S VL A A +A R G +HA V++
Sbjct: 219 QTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVR 278
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ---- 400
G D + N+LID+Y+KC E + VF+S+ +VSWN +I G+G G
Sbjct: 279 KGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPS---VTIVSWNILITGFGQEGSCAKA 335
Query: 401 ------MEE-------------------------AKELFDNMPKRNDVSWSAIISGYLEH 429
M+E A+ +FD + + + +W+ ++SGY +
Sbjct: 336 VEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQE 395
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+Q +F M P+++T + +L + + + L+ G+ +H ++ D+F+
Sbjct: 396 EQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVA 455
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
+ L D Y+K G I +R +F++M +++ + W ++ GL KE+ + F++M + I
Sbjct: 456 SGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIM 515
Query: 550 PNELTILSVLFACSHSGLVDKGLK-YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P E + S++ +CS + G + + M+ Y+ N + ++DM ++ G + +A
Sbjct: 516 PTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYD--QNVYVGSALIDMYAKCGNMDDAR 573
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
F ++M + + AW ++ G Y + ++AV+
Sbjct: 574 LFFDTMMMK-NIVAWNEMIHG---YAQNGLGDKAVE 605
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 222/463 (47%), Gaps = 45/463 (9%)
Query: 6 RSLFSINPETSFNSYIETCL-CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
RS ++P S +S + C D + G+A+H +++ G ++++ L+
Sbjct: 235 RSGVPVDP-VSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLID 293
Query: 65 MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVS 120
MY + EA ++ + L +V N +I Q G+ +A + M E NEV+
Sbjct: 294 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 353
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
++ L++ +K V + F++ +V +W + G+ Q + ++LF ++ V
Sbjct: 354 YSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNV 413
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P+ T + I +C+++ G V + + V + L+ + K G++ +ARS
Sbjct: 414 QPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS 473
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+F++M +RDVV W N + + I N+ EA
Sbjct: 474 IFNKMTERDVVCW--------------------------NSIISGLTIHSLNK-----EA 502
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F F+QM P S ++ ++++ + L ++ G +HA V+K G +++V++ +ALID+
Sbjct: 503 FDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDM 562
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRND 416
Y+KCG D RL FD+++ K+ +V+WN MI GY NG ++A ELF+ M K +
Sbjct: 563 YAKCGNMDDARLFFDTMMMKN---IVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDA 619
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVL 458
V++ A+++G D A FN M S G IP ++ ++
Sbjct: 620 VTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLI 662
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 169/343 (49%), Gaps = 24/343 (6%)
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D F++N L++LYS+ G + L F ++ + S+N+ + G ++ A++L
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALPSPND---YSYNAALSAACRAGDLDAARDLLG 98
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAV--FNEMLLSGEIPNKSTFSSVLCASASVASL 467
MP+RN VSW+ +IS L D AV + M G +P T +SVL A +A+L
Sbjct: 99 GMPRRNAVSWNTVISA-LARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAAL 157
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
G+ HG +K+G + F+ AL Y K G + + R+F M NE+S+T M+ GL
Sbjct: 158 GDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGL 217
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD----KGLKYFNSMEPIYN 583
A++G +++ LF M ++ + + +++ SVL AC+ + D + + ++ +
Sbjct: 218 AQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVV 277
Query: 584 IKPNG--RHY-TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
K G +H ++DM ++ + EA S+P +W L++G + E
Sbjct: 278 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLP-SVTIVSWNILITG---FGQEGSCA 333
Query: 641 RAVKNLWKLAEEHPAGY----VLLSNIYASAGRWIDAMNVRKL 679
+AV+ L + E AG+ V SN+ AS + D + R +
Sbjct: 334 KAVEVLSLMQE---AGFEPNEVTYSNLLASCIKARDVHSARAM 373
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 115/279 (41%), Gaps = 53/279 (18%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E+S+ S I +C + + + GR +H ++K G + Y+ + L+ MY
Sbjct: 518 ESSYASMINSC-------SRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMY------- 563
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ GN+++A+ FD M +N V+W +I G+ ++G
Sbjct: 564 ------------------------AKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGL 599
Query: 134 VEESMWYF------ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVT 186
++++ F E+ P + +++ A + G +G +A+ F + S G+ P
Sbjct: 600 GDKAVELFEYMLTTEQKP--DAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEH 657
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD--- 243
++ + A F + V LI K + + L+ + +L + +
Sbjct: 658 YTCLIDALGRAGRF---VEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLF 714
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
R++ ++ + ++ +++ +G G+A + M R V
Sbjct: 715 RIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVV 753
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/724 (29%), Positives = 348/724 (48%), Gaps = 104/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L QGR +H + K E ++ L+ +YLG A + D+ D
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PER------------------------ 116
V N +I+ + Q G+ E A ++FD M P+
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269
Query: 117 ---------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
+ ++ +L+ ++K G +E + F NV+ W + + Q +
Sbjct: 270 YLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ ++F ++ +G+ PN+ T+ I + C LG + L K GFE + V
Sbjct: 330 SFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG---- 385
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
V++D++ + G L +AR+I + + +R+ VSW+ M
Sbjct: 386 ---------------------------VLIDMYSKYGCLDKARKILEMLEKRDVVSWTSM 418
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q + EEA F++M P+ + SA A +KA+R G+ +HA V G
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D+ I WN+++ Y G+ EEA L
Sbjct: 479 AADISI----------------------------------WNTLVNLYARCGRSEEAFSL 504
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F + +++++W+ +ISG+ + + + VF +M +G N TF S + A A++A +
Sbjct: 505 FREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADI 564
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +HG+ +K G + + AL Y K G IE ++ +F M +NE+SW ++
Sbjct: 565 KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSC 624
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ G E+++LF++M++ + PN++T + VL ACSH GLV++GL YF SM +Y + P
Sbjct: 625 SQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPI 684
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CVVD+L R+G+L A F++ MP ++ W +LLS CK +KN +I E A K+L
Sbjct: 685 PDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLL 744
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L A YVLLSN YA G+W + VRK+M ++G+RK G SW+EV+N VH FF
Sbjct: 745 ELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGD 804
Query: 708 DHNP 711
+P
Sbjct: 805 RLHP 808
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 230/506 (45%), Gaps = 67/506 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K+G V ++ F+ ++ +SW A + G+ Q+G EA +L+ ++ + V P
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPT 143
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
SS+ AC + F G + ++K F V N+LI L L G LA VF
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M D V++ ++ G A+ G+ E A ++
Sbjct: 204 DMLFCDRVTFNTLIS--------GHAQ-----------------------CGHGECALQI 232
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M +P+ + +L+A AS+ L+ G +H+++LK G+ D +L+DLY K
Sbjct: 233 FDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVK 292
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ + +F+ D +VV WN M+ YG + +D++ S
Sbjct: 293 CGDIETAHDIFNL---GDRTNVVLWNLMLVAYG----------------QISDLAKS--- 330
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
F +F +M +G PN+ T+ +L +E G+ +H IK GF
Sbjct: 331 ------------FEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D+++ L D Y+K G ++ +R++ + + ++ +SWT M+ G + + +E++ F+EM
Sbjct: 379 SDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + P+ + + S AC+ + +GL+ ++ + + + +V++ +R GR
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQ-IHARVYVSGYAADISIWNTLVNLYARCGR 497
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSG 629
EA + + D W L+SG
Sbjct: 498 SEEAFSLFREIEHK-DEITWNGLISG 522
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 189/389 (48%), Gaps = 39/389 (10%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+++D++ + G + +AR++F E+ R+ VSW M++ Y QSG +EAFRL+ QM + P
Sbjct: 83 LLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIP 142
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
S VLSA K G +HA V K + F+ NALI LY L F
Sbjct: 143 TPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY----------LGF 192
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
G + A+ +F +M + V+++ +ISG+ + +
Sbjct: 193 ------------------------GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F+EM LSG P+ T +S+L A ASV L+KGK LH ++K G +D +L D
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K GDIE++ +F+ N + W +M+ + +S +F +M+ T I PN+ T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L C+ +G ++ G + +S+ + + ++DM S+ G L +A + M
Sbjct: 349 YPCILRTCTCTGQIELG-EQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE-M 406
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ D +W S+++G Y E A+
Sbjct: 407 LEKRDVVSWTSMIAG---YVQHDFCEEAL 432
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 181/439 (41%), Gaps = 57/439 (12%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+L+ T + G +H IK G + Y++ L+ MY +A +I++ L
Sbjct: 351 CILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKR 410
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPE------------------------------ 115
D+V MI +Q EEA F M +
Sbjct: 411 DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIH 470
Query: 116 -RNEVS--------WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
R VS W L++ + + GR EE+ F ++ I+W I GF Q+
Sbjct: 471 ARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYK 530
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+AL +F+K+ ++G K N TF S A A + D + G V G K G V N+LI
Sbjct: 531 QALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALI 590
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEV 282
+L K G ++ A+ +F M R+ VSW I+ + G EA +FD+M + N+V
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDV 650
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
++ ++A + G EE F+ M+ Y P ++ V+ L R+G A
Sbjct: 651 TFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILG-----RAGQLDRAR 705
Query: 342 VLKIGIEKDVFISNALI--DLYSKCGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+++ +NA+I L S C K+ G L ++E + S+ + Y
Sbjct: 706 RF---VDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYA 762
Query: 397 LNGQMEEAKELFDNMPKRN 415
+ G+ ++ M R
Sbjct: 763 VTGKWANRDQVRKMMKDRG 781
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 41/280 (14%)
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+ +HA + G+ D I N LIDLY+K
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAK-------------------------------- 90
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
NG + +A+++F + R+ VSW A++SGY + F ++++M + IP S
Sbjct: 91 --NGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLS 148
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
SVL A +G+ +H ++ K F + F+G AL Y G + + RVF M
Sbjct: 149 SVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFC 208
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-- 573
+ +++ ++ G A+ G+ + ++ +F+EM+ + + P+ +T+ S+L AC+ G + KG +
Sbjct: 209 DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLH 268
Query: 574 -YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
Y ++ G ++D+ + G + A D N
Sbjct: 269 SYLLKAGMSFDYITEGS----LLDLYVKCGDIETAHDIFN 304
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 220/695 (31%), Positives = 347/695 (49%), Gaps = 80/695 (11%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA----------NE 77
LK + Q + + R ++ H++ T L+ Y+ + S EA
Sbjct: 97 LKQLVKQGQLCKSR----YMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPG 152
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+ +D + + C + NI +G L + G+ VS +ALI +MK G++E+
Sbjct: 153 LQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVS-SALIDMYMKVGKIEQG 211
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F++ +NV+SWTA I G V G++ EAL F ++ S V + TF+ KA A+
Sbjct: 212 CRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADS 271
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+ G ++ K GF++ V N+L T+ K G+ D +F++M+ DVV
Sbjct: 272 SLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVV------ 325
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
SW+ +I Y Q G E A F++M + + PN
Sbjct: 326 -------------------------SWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKY 360
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
F+ V+SA A+L + G +H HVL++G+ + ++N+++ LYSK G K LVF I
Sbjct: 361 TFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGI 420
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
KD+ +SW+++I Y G AKE FD + SW
Sbjct: 421 TRKDI---ISWSTIIAVYSQGGY---AKEAFDYL------SW------------------ 450
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
M G PN+ SSVL S+A LE+GK +H ++ +G ++ + +AL Y+
Sbjct: 451 ----MRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYS 506
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G +E + ++F+ M N ISWT M+ G AE GY++E+INLFE++ + P+ +T +
Sbjct: 507 KCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIG 566
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL ACSH+G+VD G YF M Y I P+ HY C++D+L R+GRLSEAE I SMP
Sbjct: 567 VLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCY 626
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
D W++LL C+ + + + L +L ++ L+NIYA+ GRW +A ++R
Sbjct: 627 TDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIR 686
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
KLM KG+ K G SWV V ++++ F +P+
Sbjct: 687 KLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQ 721
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 226/700 (32%), Positives = 345/700 (49%), Gaps = 113/700 (16%)
Query: 29 KDITSQNLVIQGRALHGH---LIKTGIHKER-----YLTTRLLIMYLGSRKSLEANEIVK 80
+DI S ++I G A HG + ER LTT L I+ + S A E VK
Sbjct: 195 RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVK 254
Query: 81 DLN------GF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
+++ GF DL V N +I+ + G++++A+ +FDGM +R+
Sbjct: 255 EVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD--------------- 299
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
VISW A I G QNG EA +FLK+ + G P+ T+ S+
Sbjct: 300 ----------------VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLN 343
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
+ V + G + V ++ + + ++ G +D
Sbjct: 344 THVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSID---------------- 387
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
+A+ IFD++ RN +W+ MI Q EA LF QM R F
Sbjct: 388 ---------------DAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGF 432
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
P+ + F +LSA +AL VH++ + G+ D+ + NAL+ +Y+KCG T
Sbjct: 433 FPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTM---- 487
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
AK++FD+M +RN +W+ +ISG +H
Sbjct: 488 ------------------------------YAKQVFDDMVERNVTTWTVMISGLAQHGCG 517
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
F++F +ML G +P+ +T+ S+L A AS +LE K++H + G D+ +G AL
Sbjct: 518 HEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNAL 577
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
YAK G ++ +RRVFD M +++ SWTVM+ GLA+ G ++++LF +M+ PN
Sbjct: 578 VHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNG 637
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+ ++VL ACSH+GLVD+G + F S+ Y I+P HYTC+VD+L R+G+L EA+ FI
Sbjct: 638 YSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFIL 697
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
+MP EP W +LL C TY N ++AE A K KL + + YVLLSNIYA+ G W
Sbjct: 698 NMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQ 757
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ VR +M +G+RK G SW+EV NQ+H F +P+
Sbjct: 758 KLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPE 797
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 179/652 (27%), Positives = 285/652 (43%), Gaps = 112/652 (17%)
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
R+ + NEI + ++ C +++WG A + G V TAL++ ++
Sbjct: 23 REGGQPNEIT-----YLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVE-TALVNMYV 76
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
K G ++++ F++ +NVISWT I G G EA FL++ G PN T+ S
Sbjct: 77 KCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVS 136
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
I A A V AG + V N+L+ + K G +D AR VFD M +RD
Sbjct: 137 ILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERD 196
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+ SWT VMI Q G +EAF LF QM R
Sbjct: 197 IFSWT-------------------------------VMIGGLAQHGRGQEAFSLFLQMER 225
Query: 310 YSFKPNTSCFSIVL--SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
PN + + +L SA+ S AL VH H K G D+ + NALI +Y+KCG
Sbjct: 226 GGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSI 285
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
D RLVFD + ++D V+SWN+MIGG NG EA
Sbjct: 286 DDARLVFDGMCDRD---VISWNAMIGGLAQNGCGHEA----------------------- 319
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
F +F +M G +P+ +T+ S+L S + E K++H +++G D+
Sbjct: 320 --------FTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLR 371
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+G+A Y + G I+ ++ +FD++ +N +W M+ G+A+ +E+++LF +M +
Sbjct: 372 VGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREG 431
Query: 548 ITPNELTILSVLFAC-----------SHSGLVDKG---LKYFNSMEPIYN---------- 583
P+ T +++L A HS +D G L+ N++ +Y
Sbjct: 432 FFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQ 491
Query: 584 -----IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTYKN 635
++ N +T ++ L++ G EA M E PD+ + S+LS C +
Sbjct: 492 VFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGA 551
Query: 636 ----EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+++ AV L + G L+ ++YA G DA V M E+
Sbjct: 552 LEWVKEVHSHAVNA--GLVSDLRVGNALV-HMYAKCGSVDDARRVFDDMLER 600
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 238/481 (49%), Gaps = 69/481 (14%)
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I G+ + G++ +A+K++ ++ G +PNE+T+ SI KAC + G + I ++GF
Sbjct: 2 IGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGF 61
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ V R+E T +++++++ G + +A+ IFD+
Sbjct: 62 QSDV------------------------RVE-------TALVNMYVKCGSIDDAQLIFDK 90
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
M ERN +SW+VMI G +EAF F QM R F PN+ + +L+A AS AL
Sbjct: 91 MVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWV 150
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
VH+H + G+ D+ + NAL+ +Y+K G D R+VFD +VE+D + SW MIGG
Sbjct: 151 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERD---IFSWTVMIGGL 207
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+G+ +EA F++F +M G +PN +T+
Sbjct: 208 AQHGRGQEA-------------------------------FSLFLQMERGGCLPNLTTYL 236
Query: 456 SVLCASA--SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
S+L ASA S +LE K++H K GF D+ +G AL YAK G I+ +R VFD M
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
D++ ISW M+ GLA++G E+ +F +M++ P+ T LS+L +G + +K
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEW-VK 355
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ + + R + V M R G + +A+ + + + W +++ G
Sbjct: 356 EVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVAQQ 414
Query: 634 K 634
K
Sbjct: 415 K 415
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 189/407 (46%), Gaps = 49/407 (12%)
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MI Y + GY E+A +++ QM R +PN + +L A S +L+ G +HAH+++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ DV + AL+++Y KCG D +L+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLI--------------------------------- 87
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
FD M +RN +SW+ +I G + + F F +M G IPN T+ S+L A+AS +
Sbjct: 88 -FDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGA 146
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
LE K++H + G D+ +G AL YAKSG I+ +R VFD M +++ SWTVM+ G
Sbjct: 147 LEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGG 206
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG----LKYFNSMEPIY 582
LA+ G +E+ +LF +ME+ PN T LS+L A S + G +K +
Sbjct: 207 LAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNA---SAITSTGALEWVKEVHKHAGKA 263
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ R ++ M ++ G + +A + M + D +W +++ G A
Sbjct: 264 GFISDLRVGNALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMIGG---LAQNGCGHEA 319
Query: 643 VKNLWKLAEE----HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
K+ +E Y+ L N + S G W V K E GL
Sbjct: 320 FTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGL 366
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 208/674 (30%), Positives = 338/674 (50%), Gaps = 93/674 (13%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
Q + H H+I+TG+ + Y ++L I A
Sbjct: 46 QLKQTHAHMIRTGMFSDPYSASKLF-----------------------------AIAALS 76
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ +LE A+++FD +P+ N +W LI + S+W F
Sbjct: 77 SFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAF----------------- 119
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
L + ES PN+ TF + KA AE++ LG S+ G+ K+
Sbjct: 120 ------------LDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSD 167
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V V NSLI + GDL A ++F + E
Sbjct: 168 VFVANSLI-------------------------------HCYFSCGDLDSACKVFTTIKE 196
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
++ VSW+ MI + Q G P++A LF++M K + VLSA A ++ L G V
Sbjct: 197 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRV 256
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
+++ + + ++ ++NA++D+Y+KCG +D + +FD++ EKD V+W +M+ GY ++
Sbjct: 257 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN---VTWTTMLDGYAIS 313
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSSV 457
E A+E+ + MPK++ V+W+A+IS Y ++ + + VF+E+ L I N+ T S
Sbjct: 314 EDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVST 373
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L A A V +LE G+ +H I K G + ++ +AL Y+K GD+E +R VF+ + ++
Sbjct: 374 LSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDV 433
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
W+ M+ GLA G E++++F +M++ ++ PN +T +V ACSH+GLVD+ F
Sbjct: 434 FVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYK 493
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
ME Y I P +HY C+VD+L RSG L +A FI +MP P ++ W +LL CK + N
Sbjct: 494 MESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLS 553
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVR 697
+AE A L +L + +VLLSNIYA +G+W + +RK M GL+K GCS +E+
Sbjct: 554 LAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEID 613
Query: 698 NQVHFFFQKTDHNP 711
+H F + +P
Sbjct: 614 GMIHEFLSGDNAHP 627
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 325/595 (54%), Gaps = 18/595 (3%)
Query: 124 LISGFMKHGRVEESMWYFERNP---FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
++S + G V ++ FE +P F N++ W + + V +G+ EAL+++ ++ + GV
Sbjct: 910 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 969
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ TF + +ACA + +L SV G + + GF+ ++ V N L+ + K+G +D AR
Sbjct: 970 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 1029
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGY 296
VF+RM R VSW ++ + D A +F M E N V+W+ +++ + + G
Sbjct: 1030 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQ 1089
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E LF +M ++VLS L A G +H +V+K G E +F+ N+
Sbjct: 1090 HVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNS 1149
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF------DN 410
LI LY K G R++F I K++ VSWN++I Y G +EA +F D
Sbjct: 1150 LICLYGKHGNVNAARILFLEIKTKNI---VSWNALISSYADLGWCDEAFAIFLQLEKTDE 1206
Query: 411 MP--KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
P + N VSWSA+I G+ Q + +F M L+ N T +SVL A +A+L
Sbjct: 1207 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 1266
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
G+++HG +++ ++ +G L + Y KSG + VF+++ +K+ ISW MV G
Sbjct: 1267 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 1326
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G + +I F++M K P+ +T ++VL ACSH+GLV +G + F+ M + ++P
Sbjct: 1327 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 1386
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY C+VD+L R+G L EA + SMP EP++ W +LL+ C+ +KN ++AE ++
Sbjct: 1387 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 1446
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L E Y+LLSNIYA++GRW D+ VR KGL+K+ G SW++V+ +V+ F
Sbjct: 1447 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMF 1501
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 229/499 (45%), Gaps = 81/499 (16%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R++HGH+++ G ++ L+ MY +
Sbjct: 993 RSVHGHVVEMGFQWNLHVGNELMGMYG-------------------------------KI 1021
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMK----HGRVEESMWYFERNPFQNVISWTAAI 156
G +++A+++F+ M R+ VSW ++SG+ HG E N+++WT+ +
Sbjct: 1022 GRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLL 1081
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
+ G E ++LF ++ G+ + + ++ F G + G + K GFE
Sbjct: 1082 SSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFE 1141
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF--- 273
++ V NSLI L K G V+ AR +F ++ +++VSW ++ + ++G EA IF
Sbjct: 1142 NYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQL 1201
Query: 274 ---DEMP--ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
DE P N VSWS +I + G EEA LFR+M K N+ + VLS A
Sbjct: 1202 EKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAE 1261
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L AL G +H HV++ ++ ++ + N LI++Y+K G K+G LVF+ I KD ++SW
Sbjct: 1262 LAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKD---LISW 1318
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+M+ GYG++G E A FD M K G
Sbjct: 1319 NTMVAGYGIHGLGENAIRTFDQMIK-------------------------------DGFE 1347
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESSR 506
P+ TF +VL A + + +G++L K+IK F + + + D ++G ++ +
Sbjct: 1348 PDGVTFVAVLSACSHAGLVAEGRELFDKMIK-EFRVEPQMEHYACMVDLLGRAGLLQEAS 1406
Query: 507 RVFDRMP-DKNEISWTVMV 524
+V MP + N W ++
Sbjct: 1407 KVVKSMPVEPNACVWGALL 1425
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 155/367 (42%), Gaps = 85/367 (23%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GF+ L V N +I + GN+ A+ LF + +N VSW ALIS + G +E+ F
Sbjct: 1139 GFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIF 1198
Query: 142 ------ERNPF--QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ P NV+SW+A I GF G EAL+LF ++ + VK N VT +S+
Sbjct: 1199 LQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSV 1258
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CAE+ LG + G + ++ + ++ V N LI + K G VF+++E +D++SW
Sbjct: 1259 CAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISW 1318
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+ M+A Y G E A R F QM + F+
Sbjct: 1319 -------------------------------NTMVAGYGIHGLGENAIRTFDQMIKDGFE 1347
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F VLSA S G +GR +
Sbjct: 1348 PDGVTFVAVLSAC-----------------------------------SHAGLVAEGREL 1372
Query: 374 FDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYL 427
FD + VE + H ++G GL ++EA ++ +MP + N W A+++
Sbjct: 1373 FDKMIKEFRVEPQMEHYACMVDLLGRAGL---LQEASKVVKSMPVEPNACVWGALLNSCR 1429
Query: 428 EHKQFDL 434
HK ++
Sbjct: 1430 MHKNTEV 1436
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L R ++ +PN L +H+ ++ G + F++ ++ +Y+
Sbjct: 856 LSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA 915
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
G D + VF+ + ++++ WNS++ +G EEA E++ M K
Sbjct: 916 GFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKL-------- 967
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
G + TF V+ A A + S + + +HG ++++GF
Sbjct: 968 -----------------------GVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGF 1004
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+++ +G L Y K G ++ +R+VF+RM ++ +SW MV G A + + +F
Sbjct: 1005 QWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRM 1064
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
M + PN +T S+L + + G + ++ F M
Sbjct: 1065 MGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRM 1100
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 103/255 (40%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +HGH +V+ L +++V N +IN +
Sbjct: 1268 GREIHGH-------------------------------VVRSLMDGNILVGNGLINMYTK 1296
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+ +E +F+ + ++ +SW +++G+ HG E
Sbjct: 1297 SGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGE------------------------ 1332
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
A++ F ++++ G +P+ VTF ++ AC+
Sbjct: 1333 -------NAIRTFDQMIKDGFEPDGVTFVAVLSACSH----------------------- 1362
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-----WTVILDVFIEMGDLGEARRIFD 274
G V R +FD+M K V + ++D+ G L EA ++
Sbjct: 1363 ------------AGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVK 1410
Query: 275 EMP-ERNEVSWSVMI 288
MP E N W ++
Sbjct: 1411 SMPVEPNACVWGALL 1425
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 341/628 (54%), Gaps = 35/628 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V +++ ++ G ++ A + F + + +++ G+ K V+ ++ F+ P
Sbjct: 193 DPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMP 252
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW I ++G EAL + + + GV+P+ T++S ACA ++ G
Sbjct: 253 ERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQ 312
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ HV V +L + D + +++++ + G
Sbjct: 313 L-----------HVQVIRNLPHI--------------------DPYVASAMVELYAKCGC 341
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EA+R+F + +RN VSW+V+I + Q G E+ LF QM + + ++S
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISG 401
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ + G +H+ LK G + V +SN+LI +Y+KCG ++ L+F+ + E+D+
Sbjct: 402 CCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDI--- 458
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW MI Y G + +A+E FD+M RN ++W+A++ Y++H + ++++ML
Sbjct: 459 VSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTE 518
Query: 446 GE-IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ IP+ T+ ++ A + + + G + G +K+G D + A+ Y+K G I
Sbjct: 519 KDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISE 578
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R+ FD + K+ +SW M+ G ++ G K++I +F+++ P+ ++ ++VL CSH
Sbjct: 579 ARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSH 638
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV++G YF+ M+ +NI P H++C+VD+L R+G L EA++ I+ MP +P + W
Sbjct: 639 SGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWG 698
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CKT+ N +AE A K+L+ L GY+LL+ +YA AG+ D+ VRKLM +KG
Sbjct: 699 ALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKG 758
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++KS G SW+EV N+VH F + +P+
Sbjct: 759 IKKSPGYSWMEVNNRVHVFKAEDVSHPQ 786
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 149/627 (23%), Positives = 291/627 (46%), Gaps = 56/627 (8%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD-LNGFD 86
L+ +++ + R LH LI G+ +L LL YL +A +++D + +
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
++ HN M+N + G+L +A LF MP R+ SW ++SG Y++ F
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSG------------YYQSGQF 139
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLS 205
N AL +F+ + ++G PN TF + K+C + + L
Sbjct: 140 LN-------------------ALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQ 180
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ GL+ K + V +L+ + ++ G +D A F R++ ++ +L + +
Sbjct: 181 LLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHG 240
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ A IF MPER+ VSW+++I+ ++SG EA + M +P+++ ++ L+A
Sbjct: 241 VDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTA 300
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L +L G +H V++ D ++++A+++LY+KCG K+ + VF S+ +++
Sbjct: 301 CARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRN---S 357
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNE 441
VSW +IGG+ G E+ ELF+ M + + + +ISG L + +
Sbjct: 358 VSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSL 417
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
L SG +S++ A +L+ + I D+ T + Y++ G+
Sbjct: 418 CLKSGHTRAVVVSNSLISMYAKCGNLQNAE----LIFNFMAERDIVSWTGMITAYSQVGN 473
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLF 560
I +R FD M +N I+W M+ + G ++ + ++ +M + + P+ +T +++
Sbjct: 474 IAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFR 533
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DFINSMPFE 617
C+ G G + + + + V+ M S+ GR+SEA DF++
Sbjct: 534 GCADIGANKLGDQIIGHTVKV-GLILDTSVVNAVITMYSKCGRISEARKAFDFLS----R 588
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVK 644
D +W ++++G Y + ++A++
Sbjct: 589 KDLVSWNAMITG---YSQHGMGKQAIE 612
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 183/354 (51%), Gaps = 39/354 (11%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
+++++L D V + M+ + G +EA+R+F + +RN VSWT LI GF+++G E
Sbjct: 316 QVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSE 375
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
S ++LF ++ + ++ +++ C
Sbjct: 376 S-------------------------------VELFNQMRAELMAVDQFALATLISGCCN 404
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
D LG + L K+G + V V NSLI++ K G + A +F+ M +RD+VSWT +
Sbjct: 405 TMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGM 464
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPN 315
+ + ++G++ +AR FD+M RN ++W+ M+ Y Q G E+ +++ M T P+
Sbjct: 465 ITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPD 524
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ + A + A + G + H +K+G+ D + NA+I +YSKCG + R FD
Sbjct: 525 WVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFD 584
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISG 425
+ KD +VSWN+MI GY +G ++A E+FD++ K + +S+ A++SG
Sbjct: 585 FLSRKD---LVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSG 635
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 166/353 (47%), Gaps = 42/353 (11%)
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR-LVF 374
T + L + + AL +H+ ++ +G+ VF+ N L+ Y CG D R L+
Sbjct: 25 TQALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLR 84
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D I E + V++ N M+ GY G + +A ELF MP R+ SW+ I+SGY + QF
Sbjct: 85 DEITEPN---VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLN 141
Query: 435 VFAVFNEMLLSGE-IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+F M +G+ +PN TF V+ + ++ E L G + K D + TAL
Sbjct: 142 ALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALV 201
Query: 494 DT-------------------------------YAKSGDIESSRRVFDRMPDKNEISWTV 522
D YAKS ++ + +F MP+++ +SW +
Sbjct: 202 DMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNM 261
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ L++SG +E++++ +M + P+ T S L AC+ ++ G + ++ I
Sbjct: 262 VISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLH--VQVIR 319
Query: 583 NIKPNGRHY--TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
N+ P+ Y + +V++ ++ G EA+ +S+ + +S +W L+ G Y
Sbjct: 320 NL-PHIDPYVASAMVELYAKCGCFKEAKRVFSSLR-DRNSVSWTVLIGGFLQY 370
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 37/294 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LH +K+G + ++ L+ MY A I + D+V MI A Q
Sbjct: 411 GSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQ 470
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+ +A+ FD M RN ++W A++ +++HG E
Sbjct: 471 VGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEE------------------------ 506
Query: 160 VQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+ LK++ +L E V P+ VT+ ++ + CA+I +LG + G K G
Sbjct: 507 -------DGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILD 559
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
SV N++IT+ K G + AR FD + ++D+VSW ++ + + G +A IFD++
Sbjct: 560 TSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILN 619
Query: 279 R----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
+ + +S+ +++ + SG EE F M R ++ P FS ++ L
Sbjct: 620 KGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLG 673
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 227/728 (31%), Positives = 355/728 (48%), Gaps = 108/728 (14%)
Query: 27 LLKDITSQNLVIQ----GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
+L + S + IQ G LH +IK G H E Y+ L+ +Y SRK + A I +
Sbjct: 263 VLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTM 322
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PERNEV--------SWTALISGF 128
N D V +N +I+ +Q G + A LF M P+ V S AL G
Sbjct: 323 NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGM 382
Query: 129 MKHGR-------------------------VEESMWYFERNPFQNVISWTAAICGFVQNG 163
H VE + +F +N++ W + + Q
Sbjct: 383 QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLD 442
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
++ ++F ++ G+ PN+ T+ SI + C + LG + + K GF+ +V VC
Sbjct: 443 NLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC- 501
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+V++D++ + G L A RI +PE + VS
Sbjct: 502 ------------------------------SVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W+ MIA Y Q EA +LF +M + + F+ +SA A ++ALR G +HA
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
G D+ I+NALI LY++CG +++E
Sbjct: 592 AAGFGADLSINNALISLYARCG----------------------------------RIQE 617
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A F+ + +N++SW++++SG + F+ VF ML + N T+ S + A+AS
Sbjct: 618 AYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAAS 677
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
+A++++G+ +H ++K G+ + + +L YAKSG I + R F+ M ++N ISW M
Sbjct: 678 LANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAM 737
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ G ++ G E++ LFEEM+ I PN +T + VL ACSH GLV +GL YF SM I++
Sbjct: 738 ITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHD 797
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ P HY CVVD+L R+G+L A ++I MP D+ W +LLS C +KN +I ERA
Sbjct: 798 LVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAA 857
Query: 644 KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+L +L E A YVL+SNIYA + +WI RKLM ++G++K G SW+EV+N VH F
Sbjct: 858 HHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAF 917
Query: 704 FQKTDHNP 711
+ +P
Sbjct: 918 YAGDKLHP 925
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 152/594 (25%), Positives = 256/594 (43%), Gaps = 98/594 (16%)
Query: 49 KTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQR 108
+T +H E+ + R+ +M + + +N + ++ C+ + G+L E R
Sbjct: 30 QTTLHMEQGKSKRIQLMNFMEERGVRSN-----YQNYLWLLEGCLTS-----GSLFETMR 79
Query: 109 L--------FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
L FDG P + +L+ + +HG ++ F+ N ++V SW I FV
Sbjct: 80 LHCRISKSGFDGEP----LLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFV 135
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN-DFRLGLSVFGLIFKAGFEKHV 219
+F+ LF ++L G+ PN TF+ + KAC + F V F GF+
Sbjct: 136 AQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSP 195
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N LI L K G ++ A+ VF+ + +D+V+W
Sbjct: 196 LVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV------------------------- 230
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
MI+ +Q+G EEA LF M P S VLSA ++ G +H
Sbjct: 231 ------AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLH 284
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
V+K G + ++ N L+ LYS+ + +F ++ +D VS+NS+I G G
Sbjct: 285 CLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD---GVSYNSLISGLVQQG 341
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+ A ELF M +R+ + P+ T +S+L
Sbjct: 342 FSDRALELFTKM-QRDCLK------------------------------PDCITVASLLS 370
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A ASV +L KG LH IK G D+ L +L D Y+K D+E++ + F +N +
Sbjct: 371 ACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVL 430
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W VM+ + +S +F +M+ + PN+ T S+L C+ G + Y
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL-----YLGEQI 485
Query: 580 PIYNIKPNGRH--YTC--VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ IK + Y C ++DM ++ G+L+ A + +P E D +W ++++G
Sbjct: 486 HTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG 538
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 225/534 (42%), Gaps = 111/534 (20%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T LL S + +G LH H IK G+ + L LL +Y A++
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT 423
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMP---------------------------- 114
++V+ N M+ A Q NL ++ +F M
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 115 -----------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ N + LI + K+G++ ++ R P +V+SWTA I G+VQ+
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EAL+LF ++ G++ + + F+S ACA I R G + + AGF +S+ N
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+LI+L + G + A F+++ ++ +SW
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISW------------------------------ 633
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+ +++ QSGY EEA ++F +M R + N + +SA ASL ++ G +H+ VL
Sbjct: 634 -NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVL 692
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K G + + +SN+LI LY+K G D F+ + E++ V+SWN+MI GY +G E
Sbjct: 693 KTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERN---VISWNAMITGYSQHGCGME 749
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A LF+ EM + G +PN TF VL A +
Sbjct: 750 ALRLFE-------------------------------EMKVCGIMPNHVTFVGVLSACSH 778
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGT----ALTDTYAKSGDIESSRRVFDRMP 513
+ +++G D + K+ +D+ + + D ++G ++ + MP
Sbjct: 779 IGLVKEGLDYFESMFKI---HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMP 829
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 2/230 (0%)
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+ N M G N + +L + SL + LH +I K GF + L +L D Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
+ GD + +VFD +++ SW M+ + LF M ITPN T
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL AC + +K +S Y + ++D+ S++G + A+ N + +
Sbjct: 165 VLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK 224
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
D W +++SG E+ A ++ +E P YVL S + AS
Sbjct: 225 -DIVTWVAMISGLSQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSAST 272
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 169/406 (41%), Positives = 257/406 (63%), Gaps = 3/406 (0%)
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M KPN S V+ A AS+ +L G H +++K+G E DV + AL+ +Y++CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+D VFD + E+ +WN+MI G+ N M++A +LF M +R+ VSW+A+I+GY
Sbjct: 61 LEDAGHVFDKMSERSTR---TWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGY 117
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
++ D VFN+M +G ++ SVL A A +A+LE G+ H +++ GF D+
Sbjct: 118 AQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDI 177
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+G+AL D YAKSG +E + +VFD+MP +NE+SW ++ G A+ G +++ LFE+M +
Sbjct: 178 VVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQA 237
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PNE++ + VL ACSH+GLV++G YFN M Y I P+ HYTC++D+L R+G L E
Sbjct: 238 GIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDE 297
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE+FIN MP EPD + W +LL C+ + N ++A+R ++L + + YVLLSNIYA+
Sbjct: 298 AENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAA 357
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
AG+W DA VRKLM ++G+ K G SW+EV+ +H F +P+
Sbjct: 358 AGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQ 403
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 176/352 (50%), Gaps = 36/352 (10%)
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
++ GVKPN+ T S++ KACA I G I K GFE V V +L+ + + G
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
++ A VFD+M +R +W ++ + D+ +A ++F EM ER+ VSW+ +IA Y Q+
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
GY +E+ +F QM + K + VLSA A L AL G HA+V++ G D+ +
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+AL+D+Y+K G +D VFD + +++ VSWNS+I G +G+ +A LF+
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRN---EVSWNSIITGCAQHGRGNDAVLLFE----- 232
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ML +G PN+ +F VL A + + +G+
Sbjct: 233 --------------------------QMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYF 266
Query: 475 GKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMV 524
+ + G DV T + D ++G ++ + + MP + ++S W ++
Sbjct: 267 NLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALL 318
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 205/425 (48%), Gaps = 29/425 (6%)
Query: 54 KERYLTTRLLIMYLGSRKSLEA-----NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQR 108
K T ++ S SLE N I+K D+VV +++ + G+LE+A
Sbjct: 7 KPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGH 66
Query: 109 LFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
+FD M ER+ +W A+I+G ++ +++++ F ++V+SWTA I G+ QNG+ E+
Sbjct: 67 VFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDES 126
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L +F ++ ++G+K + S+ ACA++ LG + ++GF + V ++L+ +
Sbjct: 127 LNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDM 186
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSW 284
K G ++ A VFD+M +R+ VSW I+ + G +A +F++M + NE+S+
Sbjct: 187 YAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISF 246
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+++ + +G E F MT+ Y P+ S ++ ++ L L + +
Sbjct: 247 VGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENF---IN 303
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
+ +E DV + AL+ G T+ + + + ++ +V + + Y GQ ++
Sbjct: 304 GMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDD 363
Query: 404 AKELFDNMPKRN-----DVSW-------SAIISGYLEHKQF----DLVFAVFNEMLLSGE 447
A ++ M R SW A ++G H Q + + ++ +M +G
Sbjct: 364 AAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGY 423
Query: 448 IPNKS 452
+PNK+
Sbjct: 424 VPNKN 428
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 347/683 (50%), Gaps = 71/683 (10%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL-----IMYLGSRKSLEANEIVK 80
CL++ S L Q L+ ++ GI ++Y LL I+ L + +
Sbjct: 100 CLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKM 159
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
L G D+ V N +I+ + G ++ ++LFDGM ERN
Sbjct: 160 GLEG-DIFVSNSLIHFYAECGKVDLGRKLFDGMLERN----------------------- 195
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
V+SWT+ I G+ S EA+ LF ++ E+GV+PN VT + ACA++ D
Sbjct: 196 --------VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDL 247
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG V I + G E + N+L+ D++
Sbjct: 248 ELGKKVCSYISELGMELSTIMVNALV-------------------------------DMY 276
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
++ GD+ AR+IFDE +N V ++ +++ Y + + + +M + +P+
Sbjct: 277 MKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTML 336
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++A A L L G HA+VL+ G+E ISNA+ID+Y KCG+ + VF+ + K
Sbjct: 337 STIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNK 396
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
V V+WNS+I G +G ME A +FD M +R+ VSW+ +I ++ F+ +F
Sbjct: 397 TV---VTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFR 453
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM G ++ T + A + +L+ K + I K D+ LGTAL D +++ G
Sbjct: 454 EMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCG 513
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
D S+ VF RM ++ +WT + +A G + +I LF EM + + P+++ +++L
Sbjct: 514 DPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLT 573
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSH G VD+G + F SME + I+P+ HY C+VD+L R+G L EA D I SMP EP+
Sbjct: 574 ACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPND 633
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W SLL+ C+ +KN ++A A + L +LA E +VLLSNIYASAG+W D VR M
Sbjct: 634 VVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQM 693
Query: 681 TEKGLRKSGGCSWVEVRNQVHFF 703
EKG++K G S +EV+ +H F
Sbjct: 694 KEKGVQKVPGSSSIEVQGLIHEF 716
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 188/475 (39%), Gaps = 87/475 (18%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
SLF E T +C++ + G+ + ++ + G+ + L+ MY
Sbjct: 217 SLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMY 276
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCM--------------------------------- 93
+ A +I + +LV++N +
Sbjct: 277 MKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTML 336
Query: 94 --INANIQWGNL-----EEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
I A Q G+L A L +G+ + +S A+I +MK G+ E + FE P
Sbjct: 337 STIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS-NAIIDMYMKCGKREAACKVFEHMPN 395
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ V++W + I G V++G A ++F ++LE + V+++++ A +++ F + +
Sbjct: 396 KTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDL----VSWNTMIGALVQVSMFEEAIEL 451
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV----VSWTVILDVFIE 262
F + G + + +G +DLA+ V +EK D+ T ++D+F
Sbjct: 452 FREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSR 511
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GD A +F M +R+ +W+ I G E A LF +M KP+ F +
Sbjct: 512 CGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVAL 571
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD- 381
L+A S G GR +F S+ +
Sbjct: 572 LTAC-----------------------------------SHGGSVDQGRQLFWSMEKAHG 596
Query: 382 -VAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
H+V + M+ G G +EEA +L +MP + NDV W ++++ +HK +L
Sbjct: 597 IRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVEL 651
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 317/573 (55%), Gaps = 63/573 (10%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F++ P +N+++WT I F Q G + +A+ LFL + SG P+ T+SS+ AC E+
Sbjct: 13 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 72
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG + + + G V V SL+ + A+ D
Sbjct: 73 ALGKQLHSRVIRLGLALDVCVGCSLVDM--------YAKCAAD----------------- 107
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG-YPEEAFRLFRQMTRYSFKPNTSCF 319
G + ++R++F++MPE N +SW+ +I Y QSG +EA LF +M +PN F
Sbjct: 108 ---GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSF 164
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
S VL A +L +G V+++ +K+GI + N
Sbjct: 165 SSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN------------------------ 200
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
S+I Y +G+ME+A++ FD + ++N VS++AI+ GY ++ + + F +F
Sbjct: 201 ----------SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
NE+ +G + TF+S+L +AS+ ++ KG+ +HG+++K G+ + + AL Y++
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G+IE++ +VF+ M D+N ISWT M+ G A+ G+A ++ +F +M +T PNE+T ++VL
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSH G++ +G K+FNSM + I P HY C+VD+L RSG L EA +FINSMP D
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 430
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ W +LL C+ + N ++ A + + + + PA Y+LLSN++ASAG+W D + +RK
Sbjct: 431 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 490
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
M E+ L K GCSW+EV N+VH F +P+
Sbjct: 491 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 523
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 152/299 (50%), Gaps = 39/299 (13%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNG-FSFEALKLFLKLLESGVKPNEVTFSSI 190
G V++S FE+ P NV+SWTA I + Q+G EA++LF K++ ++PN +FSS+
Sbjct: 108 GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSV 167
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
KAC ++D G V+ K G V NSLI++ + G ++ AR FD + ++++
Sbjct: 168 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 227
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
VS+ I+D Y ++ EEAF LF ++
Sbjct: 228 VSYNAIVD-------------------------------GYAKNLKSEEAFLLFNEIADT 256
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+ F+ +LS AS+ A+ G +H +LK G + + I NALI +YS+CG +
Sbjct: 257 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 316
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISG 425
VF+ + +++ V+SW SMI G+ +G A E+F M K N++++ A++S
Sbjct: 317 FQVFNEMEDRN---VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 372
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 151/300 (50%), Gaps = 12/300 (4%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LIS + + GR+E++ F+ +N++S+ A + G+ +N S EA LF ++ ++G+
Sbjct: 201 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 260
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ TF+S+ A I G + G + K G++ + +CN+LI++ + G ++ A VF
Sbjct: 261 SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVF 320
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPE 298
+ ME R+V+SWT ++ F + G A +F +M E NE+++ +++ + G
Sbjct: 321 NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMIS 380
Query: 299 EAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHA--HVLKIGIEKDVFISN 355
E + F M + + P ++ ++ L RSG+ V A + + + D +
Sbjct: 381 EGQKHFNSMYKEHGIVPRMEHYACMVDLLG-----RSGLLVEAMEFINSMPLMADALVWR 435
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
L+ G T+ GR + I+E++ ++ + + GQ ++ ++ +M +RN
Sbjct: 436 TLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 495
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 108 RLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
RL G + N+ ALIS + + G +E + F +NVISWT+ I GF ++GF+
Sbjct: 287 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 346
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
AL++F K+LE+G KPNE+T+ ++ AC+ + G F ++K
Sbjct: 347 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 391
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 342/635 (53%), Gaps = 77/635 (12%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N+ L+ + K G V +++ F+ N +S+TA + G Q+G +AL+LF ++
Sbjct: 176 NQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMS 235
Query: 177 ESGVKPNEVTFSSICKACAEI--NDF------RLGLSVFGLIFKAGFEKHVSVCNSLITL 228
S ++ + V SS+ ACA+ D+ RL S+ L+ + GF+ V NSLI +
Sbjct: 236 RSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDM 295
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTV----------------ILDVFIEMG-------- 264
K ++D A VF+ M +VSW + +LD+ E G
Sbjct: 296 YAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTY 355
Query: 265 -----------DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
D+ AR +FD++ + + +W+ +++ Y Q ++ LFR+M + +
Sbjct: 356 SNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQ 415
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ + +++LS + L L G VH+ +K+ + D+F+++ LID+YSKCG
Sbjct: 416 PDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCG-------- 467
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
Q+ A+ +F+ M +R+ V W+++ISG H +
Sbjct: 468 --------------------------QVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNE 501
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F F +M +G P +S+++S++ + A ++S+ +G+ +H +++K G+ +V++G++L
Sbjct: 502 EAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLI 561
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK G+++ +R F+ M KN ++W M+ G A++G+ ++++ LFE M T P+ +
Sbjct: 562 DMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSV 621
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T ++VL CSHSGLVD+ + YFNSME Y I+P HYTC++D L R+GR +E I+
Sbjct: 622 TFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDK 681
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP++ D+ W LL+ C + N ++ E A K+L++L ++P+ YVLLSNIYA+ GR DA
Sbjct: 682 MPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDA 741
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
VR LM+ +G+ K G SWV ++ F D
Sbjct: 742 SAVRALMSSRGVVKGRGYSWVNHKDGARAFMVADD 776
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 145/584 (24%), Positives = 260/584 (44%), Gaps = 84/584 (14%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
A R F +P N S+ A IS + G + + R P +N +SW I ++
Sbjct: 63 HALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDS 122
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
EAL+++ +L+ G+ P T +S+ AC + G GL K G + + V N
Sbjct: 123 PGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENG 182
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ + K G V A +FD M + VS+T + MG L
Sbjct: 183 LLGMYTKCGSVADAVRLFDWMSSPNEVSFTAM------MGGLA----------------- 219
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS--------LKALRSGM 336
QSG ++A RLF +M+R + + + S VL A A +A+R
Sbjct: 220 --------QSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQ 271
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+HA V++ G + D + N+LID+Y+K + + VF+S+ +VSWN ++ GYG
Sbjct: 272 SIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSS---VSIVSWNILVTGYG 328
Query: 397 LNGQMEEAKE-----------------------------------LFDNMPKRNDVSWSA 421
G E A E +FD + K + +W+
Sbjct: 329 QLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNT 388
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
++SGY + + +F M P+++T + +L + + LE GK +H +KL
Sbjct: 389 LLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLL 448
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D+F+ + L D Y+K G + ++ +F+ M +++ + W M+ GLA +E+ + F+
Sbjct: 449 LHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFK 508
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+M + + P E + S++ +C+ + +G + + ++ Y+ N + ++DM ++
Sbjct: 509 QMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYD--QNVYVGSSLIDMYAK 566
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
G + +A F N M + + AW ++ G Y E+AV+
Sbjct: 567 CGNMDDARLFFNCMIVK-NIVAWNEMIHG---YAQNGFGEKAVE 606
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 218/494 (44%), Gaps = 67/494 (13%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ AG + N L+ L G A F + + +V S+ + GDL A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R + MP+RN VSW+ +IA +S P EA ++R M + P + VLSA ++
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
AL G H +K+G++ + F+ N L+ +Y+KCG D +FD + + VS+
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPN---EVSFT 212
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+M+GG +G +++A LF M S SAI + D V
Sbjct: 213 AMMGGLAQSGAVDDALRLFARM------SRSAI--------RVDPV-------------- 244
Query: 450 NKSTFSSVL--CASASVA------SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
SSVL CA A ++ + +H +++ GF D +G +L D YAK
Sbjct: 245 ---AVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMK 301
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + +VF+ M + +SW ++V G + G + ++ + + M+++ PNE+T ++L +
Sbjct: 302 MDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLAS 361
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI------NSMP 615
C + V F+ + KP+ T +LS G+ +D I
Sbjct: 362 CIKARDVPSARAMFDKIS-----KPS---VTTWNTLLSGYGQEELHQDTIELFRRMQHQN 413
Query: 616 FEPDSNAWASLLSGCKTYK----NEQIAERAVKNLWKLAEEHPAGYVL--LSNIYASAGR 669
+PD A +LS C +Q+ +VK L H +V L ++Y+ G+
Sbjct: 414 VQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLL-----HNDMFVASGLIDMYSKCGQ 468
Query: 670 WIDAMNVRKLMTEK 683
A + +MTE+
Sbjct: 469 VGIAQIIFNMMTER 482
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 42/225 (18%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K + N + + + ++++C ++I G AQ L DG ++N ++LI + K
Sbjct: 508 KQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGY-DQNVYVGSSLIDMYAK 566
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G ++++ +F +N+++W I G+ QNGF +A++LF +L + KP+ VTF ++
Sbjct: 567 CGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAV 626
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK--- 247
C+ G VD A + F+ ME
Sbjct: 627 LTGCSH-----------------------------------SGLVDEAIAYFNSMESNYG 651
Query: 248 -RDVVS-WTVILDVFIEMGDLGEARRIFDEMPERNE-VSWSVMIA 289
R +V +T ++D G E + D+MP +++ + W V++A
Sbjct: 652 IRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLA 696
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 207/628 (32%), Positives = 328/628 (52%), Gaps = 65/628 (10%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFE---RNPFQNVISWTAAICGFVQNGFSFEALKL 171
E N AL++ + + G +E++ F+ R +VISW + + V+ AL+L
Sbjct: 181 ESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALEL 240
Query: 172 F--LKLLESGVKPNE----VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
F + ++ NE ++ +I ACA + + + G VCN+L
Sbjct: 241 FSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNAL 300
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN----E 281
I K G ++ A VF+ ME +DVVSW ++ + + G+ G A +F+ M + N
Sbjct: 301 IDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDV 360
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
++WS +IA Y Q G +EA F+QM +PN+ +LSA ASL AL GM +HA+
Sbjct: 361 ITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAY 420
Query: 342 VLKIGI------------EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
LK + +D+ + NALID+YSKC K
Sbjct: 421 SLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFK--------------------- 459
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKR--NDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-- 445
A+ +FD++P+R N V+W+ +I GY ++ + +F+EM+
Sbjct: 460 -------------AARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPY 506
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF--PYDVFLGTALTDTYAKSGDIE 503
PN T S +L A A +A+L GK +H + + P F+ L D Y+K GD++
Sbjct: 507 AVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVD 566
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
++R VFD MP +NE+SWT M+ G G KE++++F++M+K P++++ L +L+ACS
Sbjct: 567 TARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACS 626
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
HSG+VD+GL YF+ M Y++ + HY CV+D+L+R GRL +A I MP EP + W
Sbjct: 627 HSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIW 686
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LLS C+ + N ++AE A+ L + E+ Y L+SNIYA+A RW D +R+LM +
Sbjct: 687 VALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKS 746
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
G++K GCSWV+ + FF +P
Sbjct: 747 GIKKRPGCSWVQGKKGTASFFVGDRSHP 774
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 264/532 (49%), Gaps = 53/532 (9%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T +++ ++ G ++++ ER + W + ++ G A+ + ++L +G K
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T KAC E+ + G ++ GLI GFE +V VCN+L+ + + G ++ A V
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206
Query: 242 FDRMEKR---DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
FD + ++ DV+SW I+ ++ + A +F EM MI +
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMS---------MIVHEKATNERS 257
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+ + +L A ASLKAL +H++ ++ G D F+ NALI
Sbjct: 258 DIISIVN----------------ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALI 301
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN--- 415
D Y+KCG D VF+ + KD VVSWN+M+ GY +G A ELF+NM K N
Sbjct: 302 DTYAKCGSMNDAVKVFNVMEFKD---VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPL 358
Query: 416 -DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
++WSA+I+GY + F +M+L G PN T S+L A AS+ +L +G ++H
Sbjct: 359 DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIH 418
Query: 475 GKIIKLGF------------PYDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKNEISW 520
+K D+ + AL D Y+K +++R +FD +P ++N ++W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTW 478
Query: 521 TVMVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
TVM+ G A+ G + +++ +F EM + ++ PN TI +L AC+H + G + +
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYV 538
Query: 579 EPIYNIKPNGRHYT-CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ +P+ C++DM S+ G + A + +SMP + + +W S++SG
Sbjct: 539 TRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSG 589
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 190/379 (50%), Gaps = 60/379 (15%)
Query: 63 LIMYLGSRKSLEANEIVKDLNGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMP 114
++ L + SL+A +K+++ + D V N +I+ + G++ +A ++F+ M
Sbjct: 262 IVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVME 321
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQN----VISWTAAICGFVQNGFSFEALK 170
++ VSW A+++G+ + G + FE +N VI+W+A I G+ Q G S EAL
Sbjct: 322 FKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALD 381
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF------------EKH 218
F +++ G +PN VT S+ ACA + G+ + K +
Sbjct: 382 AFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGED 441
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRD--VVSWTVILDVFIEMGDLGEARRIFDEM 276
+ V N+LI + K ARS+FD + +R+ VV+WTV++ + + GD +A +IF EM
Sbjct: 442 LMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEM 501
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
+ Y+ PN S +L A A L ALR G
Sbjct: 502 ISKP-----------------------------YAVAPNAYTISCILMACAHLAALRMGK 532
Query: 337 HVHAHVLKIG-IEKDV-FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+HA+V + E V F++N LID+YSKCG+ R VFDS+ +++ VSW SM+ G
Sbjct: 533 QIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRN---EVSWTSMMSG 589
Query: 395 YGLNGQMEEAKELFDNMPK 413
YG++G+ +EA ++FD M K
Sbjct: 590 YGMHGRGKEALDIFDKMQK 608
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 48/241 (19%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC+I+ + G+++ A+ +FD MP+RNEVSWT+++SG+ HGR +
Sbjct: 551 VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK------------- 597
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
EAL +F K+ ++G P++++F + AC+ GL+ F
Sbjct: 598 ------------------EALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFD 639
Query: 209 LIFK-----AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF-- 260
++ + A E + V I L + G +D A M + V W +L
Sbjct: 640 IMRRDYDVVASAEHYACV----IDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRV 695
Query: 261 ---IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+E+ + + + M N+ S++++ Y + ++ R+ + M + K
Sbjct: 696 HSNVELAEYALNKLV--NMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPG 753
Query: 318 C 318
C
Sbjct: 754 C 754
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 317/573 (55%), Gaps = 63/573 (10%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F++ P +N+++WT I F Q G + +A+ LFL + SG P+ T+SS+ AC E+
Sbjct: 8 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 67
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG + + + G V V SL+ + A+ D
Sbjct: 68 ALGKQLHSRVIRLGLALDVCVGCSLVDM--------YAKCAAD----------------- 102
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG-YPEEAFRLFRQMTRYSFKPNTSCF 319
G + ++R++F++MPE N +SW+ +I Y QSG +EA LF +M +PN F
Sbjct: 103 ---GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSF 159
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
S VL A +L +G V+++ +K+GI + N
Sbjct: 160 SSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN------------------------ 195
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
S+I Y +G+ME+A++ FD + ++N VS++AI+ GY ++ + + F +F
Sbjct: 196 ----------SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
NE+ +G + TF+S+L +AS+ ++ KG+ +HG+++K G+ + + AL Y++
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G+IE++ +VF+ M D+N ISWT M+ G A+ G+A ++ +F +M +T PNE+T ++VL
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSH G++ +G K+FNSM + I P HY C+VD+L RSG L EA +FINSMP D
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 425
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ W +LL C+ + N ++ A + + + + PA Y+LLSN++ASAG+W D + +RK
Sbjct: 426 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 485
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
M E+ L K GCSW+EV N+VH F +P+
Sbjct: 486 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQ 518
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 152/299 (50%), Gaps = 39/299 (13%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNG-FSFEALKLFLKLLESGVKPNEVTFSSI 190
G V++S FE+ P NV+SWTA I + Q+G EA++LF K++ ++PN +FSS+
Sbjct: 103 GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSV 162
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
KAC ++D G V+ K G V NSLI++ + G ++ AR FD + ++++
Sbjct: 163 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 222
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
VS+ I+D Y ++ EEAF LF ++
Sbjct: 223 VSYNAIVD-------------------------------GYAKNLKSEEAFLLFNEIADT 251
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+ F+ +LS AS+ A+ G +H +LK G + + I NALI +YS+CG +
Sbjct: 252 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 311
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISG 425
VF+ + +++ V+SW SMI G+ +G A E+F M K N++++ A++S
Sbjct: 312 FQVFNEMEDRN---VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 367
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 151/300 (50%), Gaps = 12/300 (4%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LIS + + GR+E++ F+ +N++S+ A + G+ +N S EA LF ++ ++G+
Sbjct: 196 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 255
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ TF+S+ A I G + G + K G++ + +CN+LI++ + G ++ A VF
Sbjct: 256 SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVF 315
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPE 298
+ ME R+V+SWT ++ F + G A +F +M E NE+++ +++ + G
Sbjct: 316 NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMIS 375
Query: 299 EAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHA--HVLKIGIEKDVFISN 355
E + F M + + P ++ ++ L RSG+ V A + + + D +
Sbjct: 376 EGQKHFNSMYKEHGIVPRMEHYACMVDLLG-----RSGLLVEAMEFINSMPLMADALVWR 430
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
L+ G T+ GR + I+E++ ++ + + GQ ++ ++ +M +RN
Sbjct: 431 TLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 490
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%)
Query: 108 RLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
RL G + N+ ALIS + + G +E + F +NVISWT+ I GF ++GF+
Sbjct: 282 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 341
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
AL++F K+LE+G KPNE+T+ ++ AC+ + G F ++K
Sbjct: 342 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 386
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 209/605 (34%), Positives = 319/605 (52%), Gaps = 67/605 (11%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+L+ AQR+FD +P+ N+ + +LI G +
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRG-------------------------------YS 64
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ +A+ LF +++ SG+ PNE T + KAC + + + V GL K G V
Sbjct: 65 NSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVF 124
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V N+LI V++ G + AR++FD++ ++
Sbjct: 125 VQNALIA-------------------------------VYVVCGLIHCARKLFDDITDKT 153
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MI Y G +EAF LFR+M + +P+ F +LS + + L G +VH
Sbjct: 154 LVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHF 213
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G++ D+ + NAL+D+Y+KCG + +FD EK+V VSW SMI Y +G
Sbjct: 214 CIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNV---VSWTSMISAYAQHGS 270
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+E A+++FD MP +N VSW+++IS YL Q+ +FN+M S +P+++T S+L A
Sbjct: 271 IEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAA 330
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ + L GK +H I+ Y V L +L D YAK G + ++ +F MP KN +SW
Sbjct: 331 CSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSW 390
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
V++ LA G E+I LFEEM+ P+E+T+ +L ACSHSGLVD GL YF+ M
Sbjct: 391 NVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGV 450
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
IY + HY C+VD+L R G L EA + I MP +PD W +LL C+ + N +I +
Sbjct: 451 IYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGK 510
Query: 641 RAVKNLWKLAEEHPAG-YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
+ +K L +L E H G YVL+SNIY A RW D +RKLM ++G++K S +E+
Sbjct: 511 QILKQLLEL-EPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGC 569
Query: 700 VHFFF 704
++ F
Sbjct: 570 IYEFM 574
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 175/389 (44%), Gaps = 74/389 (19%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ GDL A+R+FD++P+ N+ ++ +I Y+ S P +A LFR+M PN
Sbjct: 34 DAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPF 93
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VL A A + VH +K+GI VF+ NALI +Y CG R +FD I +K
Sbjct: 94 VLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKT 153
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+VSWNSMIGGY G +EA F +F +
Sbjct: 154 ---LVSWNSMIGGYAHMGNWKEA-------------------------------FLLFRK 179
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M G P+ TF ++L + L+ G+ +H I G D+ + AL D YAK G+
Sbjct: 180 MREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGN 239
Query: 502 -------------------------------IESSRRVFDRMPDKNEISWTVMVRGLAES 530
IE +R++FD+MP KN +SW M+
Sbjct: 240 LHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLRE 299
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G +E+++LF +M + + P+E T++S+L ACS G + G K N Y + G +
Sbjct: 300 GQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHN-----YILSNKGAY 354
Query: 591 ----YTCVVDMLSRSGRLSEAEDFINSMP 615
Y ++DM ++ G + A D MP
Sbjct: 355 GVTLYNSLIDMYAKCGPVVTALDIFLEMP 383
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 124/227 (54%), Gaps = 4/227 (1%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D++V N +++ + GNL AQ +FD E+N VSWT++IS + +HG +E + F++
Sbjct: 222 IDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQM 281
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +NV+SW + I +++ G EAL LF K+ S V P+E T SI AC+++ D +G
Sbjct: 282 PGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGK 341
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I V++ NSLI + K G V A +F M +++VSW VI+ G
Sbjct: 342 KIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHG 401
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM 307
EA ++F+EM +E++ + +++ + SG + F +M
Sbjct: 402 CGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRM 448
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 222/741 (29%), Positives = 360/741 (48%), Gaps = 123/741 (16%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F+S + C K I S + G LHG ++K G + Y+ L+ +Y + A
Sbjct: 273 AFSSVLSAC----KKIESLEI---GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISA 325
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF-----DGM-PERNEVS--------- 120
I +++ D V +N +IN Q G E+A LF DG+ P+ N ++
Sbjct: 326 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSD 385
Query: 121 -----------WT-------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+T AL++ + K +E ++ YF +NV+ W +
Sbjct: 386 GTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVML 445
Query: 157 CGF-----VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ ++N F ++F ++ + PN+ T+ SI K C + D LG + I
Sbjct: 446 VAYGLLDDLRNSF-----RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 500
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K F+ + VC+ LI + K+G++D +W +++
Sbjct: 501 KTSFQLNAYVCSVLIDMYAKLGKLD--------------TAWDILI-------------- 532
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
++ VSW+ MIA Y Q + ++A FRQM + + + +SA A L+A
Sbjct: 533 ---RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 589
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L+ G +HA G D+ NAL+ LYSKCG
Sbjct: 590 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCG-------------------------- 623
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
+EEA F+ ++++W+A++SG+ + + VF M G N
Sbjct: 624 --------NIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNN 675
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF S + A++ A++++GK +H I K G+ + + A+ YAK G I +++ F
Sbjct: 676 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLE 735
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+ KNE+SW M+ ++ G+ E+++ F++M +++ PN +T++ VL ACSH GLVDKG
Sbjct: 736 LSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 795
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
++YF SM Y + P HY CVVDML+R+G LS A+DFI MP EPD+ W +LLS C
Sbjct: 796 IEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACV 855
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV-RKLMTEKGLRKSGG 690
+KN +I E A +L +L E A YVLLSN+YA +W DA ++ R+ M EKG++K G
Sbjct: 856 VHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKW-DARDLTRQKMKEKGVKKEPG 914
Query: 691 CSWVEVRNQVHFFFQKTDHNP 711
SW+EV+N +H F+ ++P
Sbjct: 915 QSWIEVKNSIHSFYVGDQNHP 935
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 158/648 (24%), Positives = 287/648 (44%), Gaps = 117/648 (18%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYL------GSRKSLEA---------NEIVKDL- 82
+GR LH ++K G L+ +LL YL G+ K + N+++K+L
Sbjct: 86 EGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELA 145
Query: 83 ----NGFDLVVHNCMINANIQ------WGNLE---------------EAQRLFDGMPERN 117
+G + M+N N+ G LE A+ ++ G+ ++
Sbjct: 146 SRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLG-KS 204
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
+ LI + ++G V+ + F+ ++ SW A I G +N EA++LF +
Sbjct: 205 TIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYV 264
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
G+ P FSS+ AC +I +G + GL+ K GF VCN+L++L +G +
Sbjct: 265 LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLIS 324
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A +F M +RD V+++ +I +Q GY
Sbjct: 325 AEHIFSNMSQRDA-------------------------------VTYNTLINGLSQCGYG 353
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
E+A LF++M +P+++ + ++ A +S L SG +HA+ K+G + I AL
Sbjct: 354 EKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGAL 413
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
++LY+KC D + +E +V +VV WN M+ YG L D++ RN
Sbjct: 414 LNLYAKC---SDIETALNYFLETEVENVVLWNVMLVAYG----------LLDDL--RNS- 457
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
F +F +M + +PN+ T+ S+L + LE G+ +H +I
Sbjct: 458 ------------------FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 499
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F + ++ + L D YAK G ++++ + R K+ +SWT M+ G + + +++
Sbjct: 500 IKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 559
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
F +M I +E+ + + + AC+ + +G + ++ + + +V +
Sbjct: 560 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTL 618
Query: 598 LSRSGRLSEAEDFINSMPFEP----DSNAWASLLSGCKTYKNEQIAER 641
S+ G + EA + FE D+ AW +L+SG + N + A R
Sbjct: 619 YSKCGNIEEA-----YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 661
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 153/356 (42%), Gaps = 71/356 (19%)
Query: 313 KPNTSCFSIVLSA-LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+PN +L L + +L G +H+ +LK+G + + +S L+D Y G+
Sbjct: 64 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGAL 123
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD + E+ + +WN MI KEL S +SG
Sbjct: 124 KVFDEMPERT---IFTWNKMI------------KEL-----------ASRSLSGK----- 152
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
VF +F M+ PN+ TFS VL C SVA + + +H +II G +
Sbjct: 153 ---VFCLFGRMVNENVTPNEGTFSGVLEACRGGSVA-FDVVEQIHARIIYQGLGKSTIVC 208
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
L D Y+++G ++ +RRVFD + K+ SW M+ GL+++ E+I LF +M I
Sbjct: 209 NPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIM 268
Query: 550 PNELTILSVLFACSH----------SGLVDK-GLK------------YFN-----SMEPI 581
P SVL AC GLV K G YF+ S E I
Sbjct: 269 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHI 328
Query: 582 YN--IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FEPDSNAWASLLSGCKT 632
++ + + Y +++ LS+ G +A + M EPDSN ASL+ C +
Sbjct: 329 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSS 384
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 19/236 (8%)
Query: 449 PNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN T +L C + SL++G+ LH +I+KLGF + L L D Y GD++ +
Sbjct: 65 PNHQTLKWLLEGCLKTN-GSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGAL 123
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VFD MP++ +W M++ LA + + LF M ++TPNE T VL AC
Sbjct: 124 KVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGS 183
Query: 567 LVDKGLKYFNSMEPIY-NIKPNGRHYTCVV-----DMLSRSGRLSEAEDFINSMPFEPDS 620
+ F+ +E I+ I G + +V D+ SR+G + A + + + D
Sbjct: 184 VA------FDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGL-YLKDH 236
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
++W +++SG + E A R +++ L P Y S + SA + I+++ +
Sbjct: 237 SSWVAMISGLSKNECEVEAIRLFCDMYVLG-IMPTPYAFSSVL--SACKKIESLEI 289
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 310/544 (56%), Gaps = 35/544 (6%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L+ ++LL KP T+ ++ + C++ G V I +GF + + N L+ +
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K G + AR VFD M RD+ SW V+++ + E+G L EAR++FDEM E++ SW+ M+
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 289 ARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
Y + PEEA L+ M R + +PN SI ++A A++K +R G +H H+++ G+
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ D V W+S++ YG G ++EA+ +
Sbjct: 250 DSDE----------------------------------VLWSSLMDMYGKCGCIDEARNI 275
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD + +++ VSW+++I Y + ++ F++F+E++ S E PN+ TF+ VL A A + +
Sbjct: 276 FDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTE 335
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E GK +HG + ++GF F ++L D Y K G+IES++ V D P + +SWT ++ G
Sbjct: 336 ELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGC 395
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++G E++ F+ + K+ P+ +T ++VL AC+H+GLV+KGL++F S+ + +
Sbjct: 396 AQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HYTC+VD+L+RSGR + + I+ MP +P WAS+L GC TY N +AE A + L+
Sbjct: 456 SDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 515
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
K+ E+P YV ++NIYA+AG+W + +RK M E G+ K G SW E++ + H F
Sbjct: 516 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAAD 575
Query: 708 DHNP 711
+P
Sbjct: 576 TSHP 579
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 158/575 (27%), Positives = 255/575 (44%), Gaps = 109/575 (18%)
Query: 26 CLLKDITSQNLVIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
C L + SQ ++ G+ +H H+ +G + RLL MY ++A ++ ++
Sbjct: 89 CNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN 148
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
DL N M+N + G LEEA++LFD M E++ SWTA+++G++K + EE++ +
Sbjct: 149 RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS-- 206
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
L ++ S +PN T S A A + R G
Sbjct: 207 --------------------------LMQRVPNS--RPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ G I +AG + + +SL+ + K G +D AR++FD++ ++DVVSWT ++D
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID------ 292
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
RY +S E F LF ++ +PN F+ VL+
Sbjct: 293 -------------------------RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLN 327
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A L G VH ++ ++G + F S++L+D+Y+KCG + + V D + D
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD--- 384
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+VSW S+IGG NGQ +EA K FDL +L
Sbjct: 385 LVSWTSLIGGCAQNGQPDEAL------------------------KYFDL-------LLK 413
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKII---KLGFPYDVFLGTALTDTYAKSGD 501
SG P+ TF +VL A +EKG + I +L D + T L D A+SG
Sbjct: 414 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY--TCLVDLLARSGR 471
Query: 502 IESSRRVFDRMPDK-NEISWTVMVRGLAESGYAKESINLFEE--MEKTSITP-NELTILS 557
E + V MP K ++ W ++ G + G +I+L EE E I P N +T ++
Sbjct: 472 FEQLKSVISEMPMKPSKFLWASVLGGCSTYG----NIDLAEEAAQELFKIEPENPVTYVT 527
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
+ + +G ++ K M+ I K G +T
Sbjct: 528 MANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWT 562
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 223/709 (31%), Positives = 338/709 (47%), Gaps = 127/709 (17%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
S S FS S + LLK + + +G+ +HG +I +G + T ++
Sbjct: 13 SALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVV 72
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
MY R+ + +A +FD MPER+ V W
Sbjct: 73 NMYAKCRQ-------------------------------INDAYNMFDRMPERDLVCWNT 101
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+IS G+ QNGF+ AL L L++ E G +P+
Sbjct: 102 MIS-------------------------------GYAQNGFAKVALMLVLRMSEEGHRPD 130
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+T SI A A+ R+G++V G + +AGFE V+V +L+ + K G V +AR +FD
Sbjct: 131 SITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFD 190
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M+ R VVSW ++D +++ GD E A +
Sbjct: 191 GMDHRTVVSWNSMIDGYVQSGD-------------------------------AEGAMLI 219
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F++M +P L A A L L G VH V ++ ++ DV + N+LI +YSK
Sbjct: 220 FQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSK 279
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C +F ++ K +VSWN+MI GY NG + EA F M RN
Sbjct: 280 CKRVDIAADIFKNLRNKT---LVSWNAMILGYAQNGCVNEALNAFCEMQSRN-------- 328
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
P+ T SV+ A A ++ + K +HG +I+
Sbjct: 329 -----------------------IKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLD 365
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+VF+ TAL D YAK G I ++R++FD M ++ I+W M+ G G K S+ LF+EM
Sbjct: 366 KNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEM 425
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+K +I PN++T L L ACSHSGLV++GL +F SM+ Y I+P HY +VD+L R+GR
Sbjct: 426 KKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGR 485
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L++A DFI MP +P + ++L CK +KN + E+A ++KL + +VLL+NI
Sbjct: 486 LNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANI 545
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YA+A W VR +M + GL+K+ GCS VE+ N+VH F+ T +P+
Sbjct: 546 YATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQ 594
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 176/403 (43%), Gaps = 48/403 (11%)
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
M+ Y +S + A F +M S +P F+ +L L+ G +H V+ G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
++F ++++Y+KC Q+ +A
Sbjct: 61 FSWNLFAMTGVVNMYAKCR----------------------------------QINDAYN 86
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
+FD MP+R+ V W+ +ISGY ++ + + M G P+ T S+L A A
Sbjct: 87 MFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRL 146
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L G +HG +++ GF V + TAL D Y+K G + +R +FD M + +SW M+ G
Sbjct: 147 LRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDG 206
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
+SG A+ ++ +F++M + P +T++ L AC+ G +++G K+ + + +
Sbjct: 207 YVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERG-KFVHKLVDQLKLDS 265
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+ ++ M S+ R+ A D ++ +W +++ G Y A+
Sbjct: 266 DVSVMNSLISMYSKCKRVDIAADIFKNLR-NKTLVSWNAMILG---YAQNGCVNEALNAF 321
Query: 647 WKLAEEH--PAGYVLLSNIYASA-------GRWIDAMNVRKLM 680
++ + P + ++S I A A +WI + +R+ +
Sbjct: 322 CEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFL 364
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 194/566 (34%), Positives = 317/566 (56%), Gaps = 35/566 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSV 206
NV SW AAI G+V++G L+ ++L G +KP+ T+ + K C LGL V
Sbjct: 121 NVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGV 180
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + K GFE + V N+ IT+ L GE+ +A VF++ RD+
Sbjct: 181 LGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDL---------------- 224
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
V+W+ MI + G EA +++++M +PN ++S+
Sbjct: 225 ---------------VTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSC 269
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ ++ L G H ++ + G+E + ++NAL+D+Y KCGE R++FD++ +K + V
Sbjct: 270 SQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTL---V 326
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SW +M+ GY G ++ A+E+ +P+++ V W+AIISG ++ KQ A+F+EM +
Sbjct: 327 SWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRT 386
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P+K T + L A + + +L+ G +H I + DV LGTAL D YAK G+I +
Sbjct: 387 IEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARAL 446
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VF+ +P +N ++WT ++ GLA G A+++++ F +M I P+E+T L VL AC H G
Sbjct: 447 QVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGG 506
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LV++G KYF+ M +N+ P +HY+C+VD+L R+G L EAE+ + +MP D+ +L
Sbjct: 507 LVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGAL 566
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
C+ Y N QI ER L ++ + YVLL+++Y+ A W +A + RKLM +KG+
Sbjct: 567 FFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVE 626
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNPK 712
K+ GCS VE+ VH F + +P+
Sbjct: 627 KTPGCSLVEINGIVHEFVVRDVSHPQ 652
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 194/392 (49%), Gaps = 35/392 (8%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A I+ + G + + F ++ +++++W + I G V+ G + EA+K++ ++ V+P
Sbjct: 198 ASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRP 257
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NE+T + +C+++ D LG I + G E + + N+L+ + +K GE+ AR +F
Sbjct: 258 NEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLF 317
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D M ++ +VSWT ++ + G L AR I ++PE++ V W+ +I+ Q+ +EA
Sbjct: 318 DNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALA 377
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF +M + +P+ LSA + L AL G+ +H ++ + + DV + AL+D+Y+
Sbjct: 378 LFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYA 437
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG VF+ I +++ ++W ++I G L+G ++A
Sbjct: 438 KCGNIARALQVFEEIPQRN---CLTWTAVICGLALHGNAQDA------------------ 476
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLG 481
+ F++M+ G +P++ TF VL A +E+G+ ++ K
Sbjct: 477 -------------LSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFN 523
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ + + D ++G +E + + MP
Sbjct: 524 VSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 177/410 (43%), Gaps = 68/410 (16%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFS 320
E +L RI + E N SW+ I Y +SG E F L+++M + KP+ +
Sbjct: 103 ESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYP 162
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++L + G+ V HVLK G E D+F+ NA I + CGE + +D +
Sbjct: 163 LLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELS---VAYDVFNKS 219
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
V +V+WNSMI G G EA ++
Sbjct: 220 RVRDLVTWNSMITGCVKRGLAIEA-------------------------------IKIYK 248
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM PN+ T ++ + + V L GK+ H I + G + + L AL D Y K G
Sbjct: 249 EMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCG 308
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGY---------------------------- 532
++ ++R +FD M K +SWT MV G A G+
Sbjct: 309 ELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQ 368
Query: 533 ---AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
KE++ LF EM+ +I P+++T+++ L ACS G +D G+ + +E + + +
Sbjct: 369 AKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVA 427
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
T +VDM ++ G ++ A +P + + W +++ G + N Q A
Sbjct: 428 LGTALVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQDA 476
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 126/248 (50%), Gaps = 5/248 (2%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + + N +++ ++ G L A+ LFD M ++ VSWT ++ G+ + G ++ + +
Sbjct: 292 FTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKI 351
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++V+ W A I G VQ EAL LF ++ ++P++VT + AC+++ +G+
Sbjct: 352 PEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGI 411
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I + V++ +L+ + K G + A VF+ + +R+ ++WT ++ G
Sbjct: 412 WIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHG 471
Query: 265 DLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCF 319
+ +A F +M +E+++ +++ G EE + F +M ++++ P +
Sbjct: 472 NAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHY 531
Query: 320 SIVLSALA 327
S ++ L
Sbjct: 532 SCMVDLLG 539
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 22/296 (7%)
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+++ + + + N SW+A I GY+E + F ++ MLL G + P+ T+ +L
Sbjct: 106 ELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLL 165
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
S G + G ++K GF D+F+ A G++ + VF++ ++ +
Sbjct: 166 KGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLV 225
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
+W M+ G + G A E+I +++EME + PNE+T++ ++ +CS ++ G K F+
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLG-KEFHCY 284
Query: 579 EPIYNIKPNGRHYT-----CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
IK +G +T ++DM + G L A ++M + +W +++ G Y
Sbjct: 285 -----IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMA-QKTLVSWTTMVLG---Y 335
Query: 634 KNEQIAERAVKNLWKLAEEH--PAGYVLLSNIYASAGRWIDA----MNVRKLMTEK 683
+ A + L+K+ E+ P ++ + A G+ A M +R + +K
Sbjct: 336 ARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDK 391
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 175/438 (39%), Gaps = 86/438 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK Q G + GH++K G + ++ + M L + A ++ D
Sbjct: 164 LLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRD 223
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISG--------------- 127
LV N MI ++ G EA +++ M NE++ +IS
Sbjct: 224 LVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHC 283
Query: 128 --------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
++K G + + F+ + ++SWT + G+ + GF
Sbjct: 284 YIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDV 343
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK-HVSVCNSLI 226
A ++ K+ E V P +++I C + + L++F + E V++ N L
Sbjct: 344 AREILYKIPEKSVVP----WNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLS 399
Query: 227 TLSLKMGEVDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
S ++G +D+ + +E+ DV T ++D++ + G++ A ++F+E+P+RN +
Sbjct: 400 ACS-QLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCL 458
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+W+ +I G ++A F +M P+ F VLSA H
Sbjct: 459 TWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACC-----------HG-- 505
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK-DVA-HVVSWNSMIGGYGLNGQ 400
G ++GR F + K +V+ + ++ M+ G G
Sbjct: 506 ----------------------GLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGH 543
Query: 401 MEEAKELFDNMPKRNDVS 418
+EEA+EL NMP D +
Sbjct: 544 LEEAEELVKNMPMAADAA 561
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 312/591 (52%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+AL+ +MK G+V+E F+ P +NV+SWTA I G V+ G++ EAL F + V
Sbjct: 107 SALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVG 166
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ TFSS KACA+ G + K GF V N+L T+ K G++D
Sbjct: 167 CDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGL-- 224
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
R+F+ M +R+ VSW+ +I Q G E A
Sbjct: 225 -----------------------------RLFESMTQRDVVSWTTIIMSNVQIGQEENAV 255
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+ FR+M PN F+ V+S A+L + G +HAHV++ G+ + ++N+++ +Y
Sbjct: 256 KAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMY 315
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKC W Q++ A +F + +R+ +SWS
Sbjct: 316 SKC-----------------------W-----------QLDLASTVFQGLSRRDIISWST 341
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ISGY + + F + M G PN+ F+SVL ++A LE+GK LH ++ +G
Sbjct: 342 MISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVG 401
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ + +AL + Y+K G I+ + ++FD N +SWT M+ G AE GY++E+I+LF+
Sbjct: 402 LEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFK 461
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
++ K + P+ +T ++VL ACSH+GLVD G YFNS+ ++ I P+ HY C++D+L R+
Sbjct: 462 KLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRA 521
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL++AE I SMPF+ D W++LL C+ + + +RA + + +L ++ L+
Sbjct: 522 GRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLA 581
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+YA+ G+W +A VRK+M KG+ K G SW++ +++V F +P+
Sbjct: 582 NMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPE 632
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 193/477 (40%), Gaps = 59/477 (12%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
LK + GR +H +K G ++ L MY K + + + D+
Sbjct: 176 LKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDV 235
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVE-------- 135
V +I +N+Q G E A + F M E NE ++ A+ISG GR+E
Sbjct: 236 VSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAH 295
Query: 136 --------------------ESMWYFE--RNPFQ-----NVISWTAAICGFVQNGFSFEA 168
W + FQ ++ISW+ I G+ Q G EA
Sbjct: 296 VIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEA 355
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
+ G +PNE F+S+ C + G + + G E++ V ++LI +
Sbjct: 356 FDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINM 415
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSW 284
K G + A +FD E ++VSWT +++ + E G EA +F ++P+ + V++
Sbjct: 416 YSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTF 475
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
++A + +G + F F +++ + P+ + ++ L L + +
Sbjct: 476 IAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDA---ESMIQ 532
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
+ ++D + + L+ G+ G+ + I++ D V+ ++ Y G+ +E
Sbjct: 533 SMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKE 592
Query: 404 AKELFDNMPKRNDV-----SW-------SAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
A E+ M + V SW SA +SG H + + ++ V + + E+
Sbjct: 593 AAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAEM 649
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 178/468 (38%), Positives = 274/468 (58%), Gaps = 37/468 (7%)
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ D+V +L+++ + GDL AR++FDEM R+ V+W+ +I Y+Q P++A L +
Sbjct: 47 RDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPE 106
Query: 307 MTRYSFKPNTSCFSIVLSALASLKA--LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
M R KPN + +L A + + + + G +H L+ G + +V++S A++D+Y++C
Sbjct: 107 MLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARC 166
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
+EEA+ +FD M +N+VSW+A+I+
Sbjct: 167 H----------------------------------HLEEAQLIFDVMVSKNEVSWNALIA 192
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
GY Q D F +F+ ML P T+SSVLCA AS+ SLE+GK +H +IK G
Sbjct: 193 GYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKL 252
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
F+G L D YAKSG IE +++VFDR+ ++ +SW M+ G ++ G K ++ FEEM
Sbjct: 253 VAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEML 312
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+T I PN++T L VL ACSH+GL+D+G YF+ M+ YN++P HY +VD+L R+G L
Sbjct: 313 RTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHL 371
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
A FI+ MP +P + W +LL C+ +KN ++ A + +++L +P +VLL NIY
Sbjct: 372 DRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIY 431
Query: 665 ASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A AGRW DA VRK+M E G++K CSWVE+ N+VH F D +P+
Sbjct: 432 ALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQ 479
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 165/422 (39%), Gaps = 74/422 (17%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
E C LLK T N + +G+ +H L+ + + + LL +Y + A ++ +
Sbjct: 16 EICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDE 75
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PER----------NEVSWTALI 125
++ D+V +I Q ++A L M P + + V T ++
Sbjct: 76 MSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVL 135
Query: 126 SGFMKHG-------------------------RVEESMWYFERNPFQNVISWTAAICGFV 160
G HG +EE+ F+ +N +SW A I G+
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYA 195
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ G +A LF +L VKP T+SS+ ACA + G V L+ K G +
Sbjct: 196 RKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAF 255
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V N+L+ + K G ++ A+ VFDR+ KRDVVSW
Sbjct: 256 VGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSW--------------------------- 288
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
+ M+ Y+Q G + A + F +M R PN F VL+A + L G H
Sbjct: 289 ----NSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFD 344
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ K +E + ++DL + G + K A V W +++G ++
Sbjct: 345 MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAV--WGALLGACRMHKN 402
Query: 401 ME 402
ME
Sbjct: 403 ME 404
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L +GK +H ++ F D+ + L + YAK GD+ +R++FD M ++ ++WT ++ G
Sbjct: 31 LNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITG 90
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD--KGLKYFNSMEPIYNI 584
++ ++++ L EM + + PN+ T+ S+L A S G D +G + + + Y
Sbjct: 91 YSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG-RQLHGLCLRYGY 149
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
N ++DM +R L EA+ + M + +W +L++G Y + ++A
Sbjct: 150 DSNVYVSCAILDMYARCHHLEEAQLIFDVM-VSKNEVSWNALIAG---YARKGQGDKAFC 205
Query: 645 NLWKLAEEH--PAGYVLLSNIYASA-------GRWIDAMNVR 677
+ E+ P + S + A A G+W+ A+ ++
Sbjct: 206 LFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK 247
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 344/628 (54%), Gaps = 35/628 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V +++ ++ G ++ A + F + ++++G+ K V+ ++ FE P
Sbjct: 196 DPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMP 255
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW + Q+G + EAL + + + GV+ + T++S ACA+++ G
Sbjct: 256 ERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQ 315
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ H V SL + D + +++++ + G
Sbjct: 316 L-----------HAQVIRSLPCI--------------------DPYVASAMVELYAKCGC 344
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EARR+F + +RN VSW+V+I + Q G E+ LF QM + + ++S
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++ + +H+ LK G + V ISN+LI +Y+KCG ++ +F S+ E+D+
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDI--- 461
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW M+ Y G + +A+E FD M RN ++W+A++ Y++H + +++ ML
Sbjct: 462 VSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTE 521
Query: 446 GE-IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ IP+ T+ ++ A + + + G + G +K+G D + A+ Y+K G I
Sbjct: 522 KDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISE 581
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R++FD + K+ +SW M+ G ++ G K++I +F++M K P+ ++ ++VL +CSH
Sbjct: 582 ARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSH 641
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +G YF+ ++ +N+ P H++C+VD+L+R+G L EA++ I+ MP +P + W
Sbjct: 642 SGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWG 701
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CKT+ N ++AE A K+L+ L GY+LL+ IYA AG+ +D+ VRKLM +KG
Sbjct: 702 ALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKG 761
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K+ G SW+EV+N+VH F + +P+
Sbjct: 762 IKKNPGYSWMEVKNKVHVFKAEDVSHPQ 789
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 148/608 (24%), Positives = 284/608 (46%), Gaps = 50/608 (8%)
Query: 44 HGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK-DLNGFDLVVHNCMINANIQWGN 102
HG L+ G+ +L LL YL +A +++ D+ +++ HN M+N + G+
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
L +A+ LF MP R+ SW L+SG+ + GR
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRF---------------------------- 142
Query: 163 GFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
+A++ F+ + SG PN TF K+C + + L + GL+ K GF+ V
Sbjct: 143 ---LDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDV 199
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
++ + ++ G VD A F ++E+ V +L + + + A +F+ MPER+
Sbjct: 200 ATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDV 259
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
VSW++M++ +QSG EA + M + +++ ++ L+A A L +L G +HA
Sbjct: 260 VSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQ 319
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
V++ D ++++A+++LY+KCG K+ R VF S+ +++ VSW +IGG+ G
Sbjct: 320 VIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRN---TVSWTVLIGGFLQYGCF 376
Query: 402 EEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
E+ ELF+ M + + + IISG L + + L SG +S+
Sbjct: 377 SESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSL 436
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
+ A +L+ + + + + D+ T + Y++ G+I +R FD M +N
Sbjct: 437 ISMYAKCGNLQNAESIFSSMEE----RDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNV 492
Query: 518 ISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
I+W M+ + G ++ + ++ M + + P+ +T +++ C+ G G +
Sbjct: 493 ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITG 552
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
+ + + V+ M S+ GR+SEA + + D +W ++++G Y
Sbjct: 553 HTVKV-GLILDTSVMNAVITMYSKCGRISEARKIFDFLS-RKDLVSWNAMITG---YSQH 607
Query: 637 QIAERAVK 644
+ ++A++
Sbjct: 608 GMGKQAIE 615
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 235/506 (46%), Gaps = 87/506 (17%)
Query: 29 KDITSQNLVIQ-----GRALHGHLIKTGIHKE----------RYLTTRLLIMYLGSRKSL 73
+D+ S N+++ GRA + +H LT + LG K L
Sbjct: 257 RDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQL 316
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
A ++++ L D V + M+ + G +EA+R+F + +RN VSWT LI GF+++G
Sbjct: 317 HA-QVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGC 375
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
ES L+LF ++ + ++ ++I
Sbjct: 376 FSES-------------------------------LELFNQMRAELMTVDQFALATIISG 404
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C+ D L + L K+G + V + NSLI++ K G + A S+F ME+RD+VSW
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSF 312
T +L + ++G++G+AR FD M RN ++W+ M+ Y Q G E+ +++ M T
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDV 524
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
P+ + + A + A + G + H +K+G+ D + NA+I +YSKCG + R
Sbjct: 525 IPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARK 584
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+FD + KD +VSWN+MI GY +G ++A E+FD+M K+
Sbjct: 585 IFDFLSRKD---LVSWNAMITGYSQHGMGKQAIEIFDDMLKK------------------ 623
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK---DLHGKIIKLGFPYDVFLG 489
G P+ ++ +VL + + +++GK D+ + + + F
Sbjct: 624 -------------GAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHF-- 668
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDK 515
+ + D A++G++ ++ + D MP K
Sbjct: 669 SCMVDLLARAGNLIEAKNLIDEMPMK 694
>gi|115474659|ref|NP_001060926.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|42408463|dbj|BAD09644.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50725835|dbj|BAD33365.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622895|dbj|BAF22840.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|215704880|dbj|BAG94908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712334|dbj|BAG94461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 674
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 323/607 (53%), Gaps = 36/607 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + + G L +AQ LFD MP R+ +SWTAL++ + G + + F+ P +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + +++ A LF K+ N V++ +I A+ V+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKM----PAKNAVSYGAIISGLAKAEMLHEAELVYE-- 155
Query: 211 FKAGFEKHVSV-CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ ++ V N+L+ L++GE+ +A VF+ M RDV+SW+ ++D + G + EA
Sbjct: 156 -EMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEA 214
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
RR+FD MPERN VSW+ MI Y + G + LF M R + NT+ S+ L A A+
Sbjct: 215 RRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAA 274
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV------- 382
R G+ +H ++ +G E D+F+ +++I +YS+ G D + FD + +KD+
Sbjct: 275 SLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLI 334
Query: 383 -----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
AHV VSW SM+ G+ G M E+ ELF+ MP +++V+W+A
Sbjct: 335 TGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTA 394
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IIS ++ + + F M G PN FS +L A AS+A L +G+ H I +G
Sbjct: 395 IISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMG 454
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ +D + T+L YAK G + + VF + + + I+ M+ + G+ ++++ LF
Sbjct: 455 WVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFT 514
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M+ PN +T L +L C+ +G V +G YF SM P+Y ++PN HYTC+VD+L R+
Sbjct: 515 KMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRA 574
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L+EA + INSMP S+AWA+LLS + N A+ A + L + Y +LS
Sbjct: 575 GLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLS 634
Query: 662 NIYASAG 668
+++SAG
Sbjct: 635 RMFSSAG 641
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 243/519 (46%), Gaps = 70/519 (13%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N ++ ++ G L A R+F+GM R+ +SW+A++ G KHG V E+ F+ P
Sbjct: 163 DPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMP 222
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SWT+ I G+V+ G + L LFL + GV+ N T S ACA + R G+
Sbjct: 223 ERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQ 282
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE--- 262
+ LI GFE + + +S+I + + G + A+ FD M+++D+VSW ++ +++
Sbjct: 283 IHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDM 342
Query: 263 ----------------------------MGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
G + E+ +F++MP ++EV+W+ +I+ + +
Sbjct: 343 VEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITN 402
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G A R F +M++ KPNT FS +LSALASL L G HA+ + +G D +
Sbjct: 403 GDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH 462
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+ +Y+KCG + VF SI +++ NSMI + +G +E+A +LF M
Sbjct: 463 TSLVSMYAKCGRLAEAYHVFSSISNPS---LIAINSMITAFVQHGFVEDALKLFTKMQN- 518
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+G PN TF +L A +++G +
Sbjct: 519 ------------------------------AGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 475 GKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLA-ESG 531
+ + G + T + D ++G + + + + MP + +W ++ + S
Sbjct: 549 ESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSN 608
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
A I + +EK T+LS +F S +G+ D+
Sbjct: 609 LAFAKIAAQKLLEKDPYDATAYTVLSRMF--SSAGMEDE 645
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 174/379 (45%), Gaps = 34/379 (8%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L + +L +G +H +I G + +L ++IMY ++A + D+
Sbjct: 268 LDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDI 327
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V N +I +Q +EEA LF M +++ VSWT+++ GF G + ES+ FE+ P +
Sbjct: 328 VSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVK 387
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+ ++WTA I F+ NG A++ F ++ + G KPN + FS + A A +
Sbjct: 388 DEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLA--------- 438
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+ G + H S+ MG VFD +VS ++ + G L
Sbjct: 439 --MLNQGRQAH--------AYSINMGW------VFDSAVHTSLVS------MYAKCGRLA 476
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
EA +F + + ++ + MI + Q G+ E+A +LF +M +KPN F +L+ A
Sbjct: 477 EAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCA 536
Query: 328 SLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++ G + + + G+E + ++DL + G + + +S+ + D H
Sbjct: 537 RAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQND--HSD 594
Query: 387 SWNSMIGGYGLNGQMEEAK 405
+W +++ L+ + AK
Sbjct: 595 AWAALLSASSLHSNLAFAK 613
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
CLL + S ++ QGR H + I G + + T L+ MY + EA + ++
Sbjct: 429 CLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNP 488
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYF 141
L+ N MI A +Q G +E+A +LF M + N V++ +++G + G V++ YF
Sbjct: 489 SLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 142 E 142
E
Sbjct: 549 E 549
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/694 (30%), Positives = 346/694 (49%), Gaps = 104/694 (14%)
Query: 19 SYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI 78
S IE C+ L Q + HGH+I+TG + Y ++L M S
Sbjct: 35 SLIERCVSLR----------QLKQTHGHMIRTGTFSDPYSASKLFAMAALS--------- 75
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
+ +LE A+++FD +P+ N +W LI + S+
Sbjct: 76 --------------------SFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSI 115
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
W F +++S ES PN+ TF + KA AE++
Sbjct: 116 W-----AFLDMVS-------------------------ESQCYPNKYTFPFLIKAAAEVS 145
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
LG S+ G+ K+ V V NSLI
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLI-------------------------------H 174
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ GDL A ++F + E++ VSW+ MI + Q G P++A LF++M K +
Sbjct: 175 CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVT 234
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
VLSA A ++ L G V +++ + + ++ ++NA++D+Y+KCG +D + +FD++
Sbjct: 235 MVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME 294
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
EKD V+W +M+ GY ++ E A+E+ ++MP+++ V+W+A+IS Y ++ + + V
Sbjct: 295 EKDN---VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 439 FNEMLLSGEIP-NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
F+E+ L + N+ T S L A A V +LE G+ +H I K G + + +AL Y+
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYS 411
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K GD+E SR VF+ + ++ W+ M+ GLA G E++++F +M++ ++ PN +T +
Sbjct: 412 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
V ACSH+GLVD+ F+ ME Y I P +HY C+VD+L RSG L +A FI +MP
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
P ++ W +LL CK + N +AE A L +L + +VLLSNIYA G+W + +R
Sbjct: 532 PSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELR 591
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
K M GL+K GCS +E+ +H F + +P
Sbjct: 592 KHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 229/770 (29%), Positives = 381/770 (49%), Gaps = 143/770 (18%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
LH HLIK G ++ L L+ +Y R+ A ++V + + D+V + +++ +Q G
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 103 LEEAQRLFDGMP----ERNEVSWT---------------------ALISGF--------- 128
+EEA +F+ M + NE ++ A+++GF
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 129 -----MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
K G +++S F +NV+SW A +VQ+ EA+ LF +++ SG+ PN
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIF-------------------KAG-FEKHVSV-- 221
E + S I ACA + + LG + GL+ KAG E V+V
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 222 ---------------------CNSLITLSLK-----------------------MGEVDL 237
CN L + L MG +L
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKEL 302
Query: 238 ARSVFDRMEK----RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
R + + K D+ + ++D++ + + +ARR +D MP+++ ++W+ +I+ Y+Q
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQ 362
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G +A LF +M N + S VL ++ASL+A++ +H +K GI D ++
Sbjct: 363 CGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYV 422
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
N+L+D Y KC + +F+ E+ +V++ SMI Y G EEA +L
Sbjct: 423 INSLLDTYGKCNHIDEASKIFE---ERTWEDLVAYTSMITAYSQYGDGEEALKL------ 473
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
YL+ + D+ P+ SS+L A A++++ E+GK L
Sbjct: 474 ------------YLQMQDADIK-------------PDPFICSSLLNACANLSAYEQGKQL 508
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H IK GF D+F +L + YAK G IE + R F +P++ +SW+ M+ G A+ G+
Sbjct: 509 HVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHG 568
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
KE++ LF +M + + PN +T++SVL AC+H+GLV++G +YF ME ++ IKP HY C
Sbjct: 569 KEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYAC 628
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
++D+L RSG+L+EA + +NS+PFE D W +LL + +KN ++ ++A K L+ L E
Sbjct: 629 MIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEK 688
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+VLL+NIYASAG W + VRK M + ++K G SW+E++++V+ F
Sbjct: 689 SGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTF 738
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 152/656 (23%), Positives = 283/656 (43%), Gaps = 142/656 (21%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F S ++ C + +D+ GR +HG + TG + ++ L++MY
Sbjct: 82 EFTFPSVLKAC-SMKRDLN------MGRKVHGMAVVTGFESDGFVANTLVVMY------- 127
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ G L++++RLF G+ ERN VSW AL S +++
Sbjct: 128 ------------------------AKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQ--- 160
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ +CG EA+ LF +++ SG+ PNE + S I A
Sbjct: 161 --------------------SELCG--------EAVGLFKEMVRSGIMPNEFSISIILNA 192
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CA + + LG + GL+ K G + N+L+ + K GE++ A +VF + DVVSW
Sbjct: 193 CAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSW 252
Query: 254 TVILD--VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
I+ V + DL A L +M
Sbjct: 253 NAIIAGCVLHDCNDL---------------------------------ALMLLDEMKGSG 279
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+PN S L A A++ G +H+ ++K+ D+F + L+D+YSKC D R
Sbjct: 280 TRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDAR 339
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+DS+ +KD +++WN++I GY G +A LF M + E
Sbjct: 340 RAYDSMPKKD---IIAWNALISGYSQCGDHLDAVSLFSKM--------------FSEDID 382
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
F N++T S+VL + AS+ +++ K +H IK G D ++ +
Sbjct: 383 F-----------------NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINS 425
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L DTY K I+ + ++F+ ++ +++T M+ ++ G +E++ L+ +M+ I P+
Sbjct: 426 LLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPD 485
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
S+L AC++ ++G K + + + +V+M ++ G + +A+
Sbjct: 486 PFICSSLLNACANLSAYEQG-KQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAF 544
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
+ +P +W++++ G + + + A R + L + P ++ L ++ +
Sbjct: 545 SEIP-NRGIVSWSAMIGGYAQHGHGKEALRLFNQM--LRDGVPPNHITLVSVLCAC 597
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 154/333 (46%), Gaps = 37/333 (11%)
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
M +HAH++K G +D + N L+ LYSKC R + D E D VVSW+S++ GY
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELD---VVSWSSLLSGY 57
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
NG +EEA VFNEM L G N+ TF
Sbjct: 58 VQNGFVEEA-------------------------------LLVFNEMCLLGVKCNEFTFP 86
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
SVL A + L G+ +HG + GF D F+ L YAK G ++ SRR+F + ++
Sbjct: 87 SVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVER 146
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
N +SW + +S E++ LF+EM ++ I PNE +I +L AC+ D G K
Sbjct: 147 NVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIH 206
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
M + + + +VDM S++G + A + PD +W ++++GC +
Sbjct: 207 GLMLKM-GLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIAGCVLHDC 264
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+A + + K + P + L S + A A
Sbjct: 265 NDLALMLLDEM-KGSGTRPNMFTLSSALKACAA 296
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 206/477 (43%), Gaps = 66/477 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH LIK H + + L+ MY +A + D++ N +I+ Q
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQ 362
Query: 100 WGNLEEAQRLFDGM----PERNEVSWT--------------------------------- 122
G+ +A LF M + N+ + +
Sbjct: 363 CGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYV 422
Query: 123 --ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+L+ + K ++E+ FE +++++++T+ I + Q G EALKL+L++ ++ +
Sbjct: 423 INSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADI 482
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP+ SS+ ACA ++ + G + K GF + NSL+ + K G ++ A
Sbjct: 483 KPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADR 542
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGY 296
F + R +VSW+ ++ + + G EA R+F++M N ++ ++ N +G
Sbjct: 543 AFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGL 602
Query: 297 PEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
E + F +M + KP ++ ++ L L + + V I E D F+
Sbjct: 603 VNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVEL---VNSIPFEADGFVWG 659
Query: 356 ALIDLYS-----KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
AL+ + G+ K +++FD EK HV+ N + G+ + + ++ +
Sbjct: 660 ALLGAARIHKNIELGQ-KAAKMLFDLEPEKSGTHVLLAN-IYASAGMWENVAKVRKFMKD 717
Query: 411 --MPKRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
+ K +SW I I G H + D ++A +++ G++ +K+ +SS++
Sbjct: 718 SKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQL---GDLLSKAGYSSIV 771
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 185/433 (42%), Gaps = 79/433 (18%)
Query: 7 SLFS--INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
SLFS + + FN T +LK + S + + +H IK+GI+ + Y+ LL
Sbjct: 371 SLFSKMFSEDIDFNQ--TTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLD 428
Query: 65 MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN------- 117
Y EA++I ++ DLV + MI A Q+G+ EEA +L+ M + +
Sbjct: 429 TYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFI 488
Query: 118 ------------------EVSWTALISGFM--------------KHGRVEESMWYFERNP 145
++ A+ GFM K G +E++ F P
Sbjct: 489 CSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIP 548
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE---INDFRL 202
+ ++SW+A I G+ Q+G EAL+LF ++L GV PN +T S+ AC +N+ +
Sbjct: 549 NRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQ 608
Query: 203 GLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGE-VDLARSVFDRMEKRDVVSWTVILDVF 260
++F ++H + L+ S K+ E V+L S+ + D W +L
Sbjct: 609 YFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSI---PFEADGFVWGALLGAA 665
Query: 261 -----IEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEA--FRLFRQMTRYSF 312
IE+G A+ +FD PE++ V++A Y +G E R F + ++
Sbjct: 666 RIHKNIELGQKA-AKMLFDLEPEKSGT--HVLLANIYASAGMWENVAKVRKFMKDSKVKK 722
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+P S I + RS H+ +I + D L DL SK G
Sbjct: 723 EPGMSWIEIKDKVYTFIVGDRS----HSRSDEIYAKLD-----QLGDLLSKAG------- 766
Query: 373 VFDSIVEKDVAHV 385
+ SIVE D+ +V
Sbjct: 767 -YSSIVEIDIHNV 778
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/591 (33%), Positives = 313/591 (52%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TA + + K GR+ ++ P ++ S+ A I G+ ++ F+ALK F LL++G+
Sbjct: 321 TATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLG 380
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+E+T S ACA I G V GL K+ ++ V N+
Sbjct: 381 FDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANA----------------- 423
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
ILD++ + L EA +FD M R+ VSW+ +IA Q+G EE
Sbjct: 424 --------------ILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETL 469
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
F M +P+ + VL A A +AL +GM +H ++K G+ D F+ AL+D+Y
Sbjct: 470 AHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMY 529
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG +E+A ++ D ++ VSW+A
Sbjct: 530 CKCG----------------------------------MIEKADKIHDRTEQKTMVSWNA 555
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IISG+ +Q + F+ ML G P+ T+++VL A++A++ GK +H +IIK
Sbjct: 556 IISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQE 615
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV++ + L D Y+K G+++ S+ +F++ P+++ ++W M+ G A G +E++ LFE
Sbjct: 616 LQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFE 675
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M+ ++ PN T +SVL AC+H GLVDKGL YF+ M Y + P HY+C+VD+L RS
Sbjct: 676 SMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRS 735
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GR+ EA + + MPFE D+ W +LLS CK + N ++AE+A + L +L + + VLLS
Sbjct: 736 GRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLS 795
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYA AG W + +RK+M L+K GCSW+E++++VH F +P+
Sbjct: 796 NIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPR 846
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 250/546 (45%), Gaps = 77/546 (14%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ I+ L+ A ++FD M R+ VS+ ++ISG+ G ++ + +F P ++
Sbjct: 86 VSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERD 145
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW + I GF+QNG +++ +FL++ GV + + + + KAC + + +G+ V G
Sbjct: 146 VVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHG 205
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L+ K GF+ V ++L+ + K +D + SVF + +++ VS
Sbjct: 206 LVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVS---------------- 249
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
WS MIA Q+ E LF++M + S ++ + + A+
Sbjct: 250 ---------------WSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAA 294
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L ALR G +H+H LK D+ + A +D+Y+KCG D + V S
Sbjct: 295 LSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSS------------ 342
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
MPK + S++AII GY + F +L +G
Sbjct: 343 ----------------------MPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLG 380
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
++ T S L A AS+ +G+ +HG +K ++ + A+ D Y K + + +
Sbjct: 381 FDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDL 440
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M ++ +SW ++ ++G +E++ F M + + P++ T SVL AC+ +
Sbjct: 441 FDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQAL 500
Query: 569 DKGLKYFNSMEPIYNIKPNGRHY-----TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
+ G ME I +G + +VDM + G + +A D I+ + +W
Sbjct: 501 NTG------MEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKA-DKIHDRTEQKTMVSW 553
Query: 624 ASLLSG 629
+++SG
Sbjct: 554 NAIISG 559
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 233/496 (46%), Gaps = 67/496 (13%)
Query: 164 FSFEALKLFLK-----------LLESGVKPNEV--TFSSICKACAEINDFRLGLSVFGLI 210
FS+ A+ LF K L ++ +P TFS I + C++ N G +
Sbjct: 16 FSYHAIPLFKKIPPIPTNNFSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARM 75
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
GFE V N L+ + +K +D A VFD+M RDVVS+ I+ + G++ AR
Sbjct: 76 IFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIAR 135
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+ F EMPER+ VSW+ +I+ + Q+G ++ +F +M R + + ++VL A +L+
Sbjct: 136 KFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALE 195
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
G+ VH V+K G + DV +AL+ +Y+KC D VF + EK+ VSW++
Sbjct: 196 ECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKN---WVSWSA 252
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
MI G N + E EL F EM G +
Sbjct: 253 MIAGCVQNDRNVEGLEL-------------------------------FKEMQGVGVGVS 281
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
+S ++S+ + A++++L GK+LH +K F D+ +GTA D YAK G + +++V
Sbjct: 282 QSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLS 341
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH-----S 565
MP + S+ ++ G A S +++ F+ + KT + +E+T+ L AC+
Sbjct: 342 SMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE 401
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSN 621
G GL +K CV +DM + L+EA D + M D+
Sbjct: 402 GRQVHGLA----------VKSISMSNICVANAILDMYGKCKALAEASDLFDMME-RRDAV 450
Query: 622 AWASLLSGCKTYKNEQ 637
+W ++++ C+ NE+
Sbjct: 451 SWNAIIAACEQNGNEE 466
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 161/394 (40%), Gaps = 81/394 (20%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL---------LIMYLGSRKSLEA---- 75
+D S N +I +G+ +T H + +R+ ++ R++L
Sbjct: 447 RDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEI 506
Query: 76 -NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
I+K GFD V +++ + G +E+A ++ D ++ VSW A+ISGF
Sbjct: 507 HTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGF------ 560
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+Q S +A K F ++LE GV P+ T++++ C
Sbjct: 561 -----------------------SLLQQ--SEDAHKFFSRMLEMGVNPDNFTYAAVLDTC 595
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A + LG + I K + V +C++L+ + K G + ++ +F++ RD V+W
Sbjct: 596 ANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTW- 654
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+ M+ Y G EEA +LF M + KP
Sbjct: 655 ------------------------------NAMLCGYAHHGLGEEALKLFESMQLVNVKP 684
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVL-KIGIEKDVFISNALIDLYSKCGETKDG-RL 372
N + F VL A A + + G+H +L + G++ + ++D+ + G + L
Sbjct: 685 NHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNL 744
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
V E D V W +++ ++G +E A++
Sbjct: 745 VQKMPFEAD---AVIWRNLLSVCKIHGNVEVAEK 775
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 130/310 (41%), Gaps = 52/310 (16%)
Query: 29 KDITSQNLVIQGRAL----------HGHLIKTGIHKERYLTTRLL-----IMYLGSRKSL 73
K + S N +I G +L +++ G++ + + +L + +G K +
Sbjct: 548 KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQI 607
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
A I ++L D+ + + +++ + GN++++Q +F+ P R+ V+W A++ G+ HG
Sbjct: 608 HAQIIKQELQS-DVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGL 666
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
E EALKLF + VKPN TF S+ +A
Sbjct: 667 GE-------------------------------EALKLFESMQLVNVKPNHATFVSVLRA 695
Query: 194 CAEINDFRLGLSVFGLIF-KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVV 251
CA + GL F ++ + G + + ++ + + G +D A ++ +M + D V
Sbjct: 696 CAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAV 755
Query: 252 SWTVILDVFIEMGDL---GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
W +L V G++ +A R ++ ++ + ++ Y +G + + M
Sbjct: 756 IWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMR 815
Query: 309 RYSFKPNTSC 318
K C
Sbjct: 816 HNKLKKEPGC 825
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 202/592 (34%), Positives = 315/592 (53%), Gaps = 64/592 (10%)
Query: 123 ALISGFMK-HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
LI F+K G + + FE+ P +N ++WT I +Q G++ EA+ LFL ++ SG +
Sbjct: 209 GLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYE 268
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T S + ACA + LG + + G V LI + K VD
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC-SVD----- 322
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ-SGYPEEA 300
G + AR+IFD++ + N SW+ MI Y Q GY EEA
Sbjct: 323 ----------------------GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LFR M PN FS L A A+L ALR G V H +K+G ++N+LI +
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISM 420
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y++ +G++++A++ FD + ++N +S++
Sbjct: 421 YAR----------------------------------SGRIDDARKAFDILFEKNLISYN 446
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+I Y ++ + +FNE+ G + TF+S+L +AS+ ++ KG+ +H ++IK
Sbjct: 447 TVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS 506
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G + + AL Y++ G+IES+ +VF+ M D+N ISWT ++ G A+ G+A +++ LF
Sbjct: 507 GLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELF 566
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+M + + PNE+T ++VL ACSH GLV++G K+F SM + + P HY C+VD+L R
Sbjct: 567 HKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGR 626
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
SG LSEA FINSMP++ D+ W + L C+ + N ++ + A K + + PA Y+LL
Sbjct: 627 SGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILL 686
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SN+YAS +W + N+RK M EK L K GCSWVEV N+VH F+ +PK
Sbjct: 687 SNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPK 738
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/577 (27%), Positives = 275/577 (47%), Gaps = 74/577 (12%)
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
DL + L + C+ + G L ++L + + V+ +LIS + K G+ E++
Sbjct: 65 DLQTYSLFLKKCIRTRSFDIGTLVH-EKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123
Query: 141 FE-RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F +++ISW+A + F N F AL F+ ++E+G PNE F++ +AC+
Sbjct: 124 FRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEF 183
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
+G S+FG + K G+ + DV ++D+
Sbjct: 184 VSVGDSIFGFVIKTGYLQ------------------------------SDVCVGCGLIDM 213
Query: 260 FIE-MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
F++ GDL A ++F++MPERN V+W++MI R Q GY EA LF M ++P+
Sbjct: 214 FVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFT 273
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC---GETKDGRLVFD 375
S V+SA A+++ L G +H+ ++ G+ D + LI++Y+KC G R +FD
Sbjct: 274 LSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFD 333
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
I++ + V SW +MI GY G +E E D
Sbjct: 334 QILDHN---VFSWTAMITGYVQKGGYDE--EALD-------------------------- 362
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F M+L+ IPN TFSS L A A++A+L G+ + +KLGF + +L
Sbjct: 363 --LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISM 420
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
YA+SG I+ +R+ FD + +KN IS+ ++ A++ ++E++ LF E+E + + T
Sbjct: 421 YARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTF 480
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
S+L + G + KG + ++ +K N ++ M SR G + A M
Sbjct: 481 ASLLSGAASIGTIGKG-EQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME 539
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
+ + +W S+++G + A +A++ K+ EE
Sbjct: 540 -DRNVISWTSIITG---FAKHGFATQALELFHKMLEE 572
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 205/472 (43%), Gaps = 79/472 (16%)
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
F N T + + NG +A+ ++ G P+ T+S K C F +G
Sbjct: 28 FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMG 264
V + ++ + NSLI+L K G+ + A S+F M RD++SW+ ++ F
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFAN-- 145
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
N G+ A F M + PN CF+
Sbjct: 146 ---------------------------NNMGF--RALLTFVDMIENGYYPNEYCFAAATR 176
Query: 325 ALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A ++ + + G + V+K G ++ DV + LID++ K GR
Sbjct: 177 ACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVK------GR------------ 218
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
G + A ++F+ MP+RN V+W+ +I+ ++ +F +M+
Sbjct: 219 ---------------GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMI 263
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK---SG 500
SG P++ T S V+ A A++ L G+ LH + I+ G D +G L + YAK G
Sbjct: 264 FSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDG 323
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAE-SGYAKESINLFEEMEKTSITPNELTILSVL 559
+ ++R++FD++ D N SWT M+ G + GY +E+++LF M T + PN T S L
Sbjct: 324 SMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTL 383
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEA 607
AC++ + G + F + +K CV + M +RSGR+ +A
Sbjct: 384 KACANLAALRIGEQVFT-----HAVKLGFSSVNCVANSLISMYARSGRIDDA 430
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 176/417 (42%), Gaps = 81/417 (19%)
Query: 36 LVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE-----ANEIVKDLNGFDLVVH 90
L++ G+ LH I+ G+ +R + L+ MY ++ S++ A +I + ++
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMY--AKCSVDGSMCAARKIFDQILDHNVFSW 343
Query: 91 NCMINANIQWGNL-EEAQRLFDGM------PERNEVSWT--------------------- 122
MI +Q G EEA LF GM P S T
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403
Query: 123 ------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALK 170
+LIS + + GR++++ F+ +N+IS+ I + +N S EAL+
Sbjct: 404 KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALE 463
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL 230
LF ++ + G+ + TF+S+ A I G + + K+G + + SVCN+LI++
Sbjct: 464 LFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYS 523
Query: 231 KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ G ++ A ++F++M +RN +SW+ +I
Sbjct: 524 RCGNIE-------------------------------SAFQVFEDMEDRNVISWTSIITG 552
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEK 349
+ + G+ +A LF +M +PN + VLSA + + + G H + + G+
Sbjct: 553 FAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIP 612
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ ++D+ + G + +S+ K A + W + +G ++G +E K
Sbjct: 613 RMEHYACIVDILGRSGSLSEAIQFINSMPYK--ADALVWRTFLGACRVHGNLELGKH 667
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 188/462 (40%), Positives = 281/462 (60%), Gaps = 7/462 (1%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFK 313
+LDV+ + G + +A ++FDEMP R+ VSW+ ++ +N++ P + M T +
Sbjct: 43 TLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQ 102
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F+ ++ A +SL LR G VHA + D + ++LID+Y+KCG+ D R V
Sbjct: 103 PDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAV 162
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FDSI+ K+ VSW SMI GY +G+ EA +LF P RN SW+A+ISG ++
Sbjct: 163 FDSILFKNS---VSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGI 219
Query: 434 LVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
F++FNEM G +I + SSV+ A++A LE GK +HG +I LGF +F+ AL
Sbjct: 220 YSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNAL 279
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK DI +++ +F RMP K+ ISWT ++ G A+ G A+E++ L++EM + I PNE
Sbjct: 280 VDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNE 339
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+T + +L+ACSH+GLV +G + F SM Y+I P+ +HYTC++D+LSRSG L EAE+ ++
Sbjct: 340 VTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLD 399
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
+PF+PD WASLLS C + N ++ R + L E P+ Y+LLSN+YA A W
Sbjct: 400 KIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGS 459
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEV--RNQVHFFFQKTDHNPK 712
VRKLM+ +RK G S ++ +QV + DH K
Sbjct: 460 VSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMK 501
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 236/512 (46%), Gaps = 75/512 (14%)
Query: 76 NEIVKDLNGFDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
++I+K GFD ++ N +++ + G + +A +LFD MP R+ VSW ++++ K
Sbjct: 27 SQIIK--AGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALI 84
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
++ + F+ + G++P+ F+ I +A
Sbjct: 85 PRRTL-------------------SMLNTMFTHD-----------GLQPDHFVFACIVRA 114
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C+ + RLG V + F V +SLI + K G+ D AR+VFD + ++ VSW
Sbjct: 115 CSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSW 174
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T ++ + G EA +F + P RN SW+ +I+ QSG+ +F LF +M R
Sbjct: 175 TSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGID 234
Query: 314 -PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+ S V+ A+L L G +H V+ +G E +FISNAL+D+Y+KC + +
Sbjct: 235 IVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKD 294
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+F + KD V+SW S+I G +G+ EEA L+D
Sbjct: 295 IFYRMPRKD---VISWTSIIVGTAQHGKAEEALTLYD----------------------- 328
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--T 490
EM+LS PN+ TF +L A + + +G++L + + + + L T
Sbjct: 329 --------EMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF-RSMTTDYSINPSLQHYT 379
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRGLAESGYAKESINLFEE-MEKTSI 548
L D ++SG ++ + + D++P K +E +W ++ + + + + ++
Sbjct: 380 CLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPE 439
Query: 549 TPNELTILSVLFACSHS-GLVDKGLKYFNSME 579
P+ +LS ++A + G V K K +SME
Sbjct: 440 DPSTYILLSNVYAGAEMWGSVSKVRKLMSSME 471
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 180/351 (51%), Gaps = 16/351 (4%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D VV + +I+ + G ++A+ +FD + +N VSWT++ISG+ + GR E+M F + P
Sbjct: 139 DEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAP 198
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGL 204
+N+ SWTA I G +Q+G + LF ++ G+ + + SS+ CA + LG
Sbjct: 199 VRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGK 258
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ GL+ GFE + + N+L+ + K ++ A+ +F RM ++DV+SWT I+ + G
Sbjct: 259 QIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHG 318
Query: 265 DLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA ++DEM + NEV++ ++ + +G LFR MT YS P+ +
Sbjct: 319 KAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHY 378
Query: 320 SIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ +L L+ RSG A L KI + D +L+ + + G + D +
Sbjct: 379 TCLLDLLS-----RSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRV 433
Query: 378 VE---KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
++ +D + + +++ G + G + + ++L +M R + +S+I G
Sbjct: 434 LDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFG 484
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 142/348 (40%), Gaps = 69/348 (19%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N S F L A ++ + +H+ ++K G +K +SN L+D+Y KCG +F
Sbjct: 2 NISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLF 61
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D MP R+ VSW++I++ + +
Sbjct: 62 D----------------------------------EMPNRDHVSWASILTAHNKALIPRR 87
Query: 435 VFAVFNEMLL-SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
++ N M G P+ F+ ++ A +S+ L GK +H + + F D + ++L
Sbjct: 88 TLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLI 147
Query: 494 DTYAKSGDIESSRRVFD-------------------------------RMPDKNEISWTV 522
D Y K G + +R VFD + P +N SWT
Sbjct: 148 DMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTA 207
Query: 523 MVRGLAESGYAKESINLFEEMEKTSI-TPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ GL +SG+ S +LF EM + I + L + SV+ C++ L++ G K + +
Sbjct: 208 LISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELG-KQIHGLVIA 266
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ +VDM ++ + A+D MP D +W S++ G
Sbjct: 267 LGFESCLFISNALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSIIVG 313
>gi|242091920|ref|XP_002436450.1| hypothetical protein SORBIDRAFT_10g002910 [Sorghum bicolor]
gi|241914673|gb|EER87817.1| hypothetical protein SORBIDRAFT_10g002910 [Sorghum bicolor]
Length = 686
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/687 (31%), Positives = 362/687 (52%), Gaps = 21/687 (3%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL--TTRLLIMYLGSRK--SLEAN 76
+ +C+ LL+ ++ GR LH L+K+G H L T +L+MY+ S +A+
Sbjct: 7 VPSCIQLLRSCSAA----AGRQLHQLLLKSG-HVPSSLPPTNSVLLMYVRGSPLYSRDAH 61
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
+ ++ + +N +I A + G+ A R+F MP+RN SW A+I+G G ++
Sbjct: 62 RLFDEMPTKNCFSYNSLITALFKSGDHRAALRVFRSMPDRNTFSWNAVITGLAGAGDLDT 121
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV-------TFSS 189
+ E P ++ ++ A + FV+ G EA L LK + S P+ + ++
Sbjct: 122 ARDLLEEMPVKDAVACHAVLHRFVRCGRVDEAFAL-LKRIGSHCNPDVIPPWSDPFVLTT 180
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ ACA+ + +G V + A E + +LI + K ++D AR V DR++ D
Sbjct: 181 VVGACADRMKYEIGRQVHARLVVAKTEIDSVLACALIDMYCKCRDLDSARLVLDRLKHVD 240
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+S + ++ + G L +A +FD++ + W+ +I+ + + + AF LF +M R
Sbjct: 241 EISLSALVYGYASYGQLHKALCLFDKVENPSIALWNSLISGCVPAYHGDSAFVLFVRMLR 300
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
PN+S ++IVL+ L L+ G HA LK G D+ ++ALID YSKC D
Sbjct: 301 SDMLPNSSIYAIVLNMCGFLGMLKPGQQTHACALKSGAVNDLIAASALIDFYSKCSLWAD 360
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
F + D + NSMI Y GQ++EA+ +FD +P ++ +SW+++I G+ ++
Sbjct: 361 ACQAFGELRHHDT---IVLNSMITVYSNCGQIDEARRVFDMIPSKSVISWNSMIVGFSQN 417
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+F EM G + SSVL AS S+ S+ G+ + I LG D +
Sbjct: 418 GHALDAMELFCEMHWLGLQIDNVAVSSVLSASGSICSISFGEQIFALAIALGLQSDHIVV 477
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
++L D Y K G++ + R+FD + + +E+ W M+ G A +GY E++ + M +
Sbjct: 478 SSLIDLYCKCGNLANGCRIFDGIDNPDEVLWNSMLIGYASNGYGLEALKFLDLMRSRGLK 537
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+E T + VL AC HSGLV++GL++F M+ + + P+ HY CV D+L R+GRL EA +
Sbjct: 538 PSERTFVGVLSACCHSGLVEEGLRWFYRMKEDFGVSPSAEHYACVTDLLVRAGRLDEAVE 597
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA-EEHPAGYVLLSNIYASAG 668
FI +MPF+ D+ +W S++ GCK NE + + L + H + YV LS+ A+ G
Sbjct: 598 FIENMPFKADAISWTSIIGGCKAQGNEALLHKVANKLMETGLSPHSSLYVQLSSTLAAHG 657
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVE 695
W + +R +M ++ + K+ GCSW++
Sbjct: 658 DWDKSAEIRSMMHDRRISKNAGCSWID 684
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/595 (33%), Positives = 335/595 (56%), Gaps = 25/595 (4%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSS 189
GR+E++ F+ P +N SW I +V G EAL L+ L+ S ++ + FSS
Sbjct: 6 GRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAFIFSS 65
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ ACA + GL + I K G ++ V + N+L+T+ K G +D A+ VFDR+ RD
Sbjct: 66 VLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRD 125
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
VVSW ++ E G L A +I+ EM + + WS MI+ +G+ EA L+R+M
Sbjct: 126 VVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMI- 184
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
S +PN S + VL+A L L SG V ++ G+++D + L++LY++ G+
Sbjct: 185 LSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIA 244
Query: 370 GR-LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
R ++FDS+ ++ VVSWN+M+ + N +++EA++LF MP ++ +SW+A+I+G+ +
Sbjct: 245 AREVLFDSMKDRT---VVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQ 301
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLG----F 482
+ + +F M L G P++ T+ SVL CA+ + +SL G+ I G
Sbjct: 302 NGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSL-------GRFICDGMDEAL 354
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+ + ++ + Y K G E +R+ F M ++ +SWT ++ +++GY+ E++++F
Sbjct: 355 AKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRI 414
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM--EPIYNIKPNGRHYTCVVDMLSR 600
M + + PN +T+++ L ACSH L D+G F+S+ Y + N H+ C +D+L R
Sbjct: 415 MVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGR 474
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE---EHPAGY 657
+G L +AE I MPF+ + AW SLLS C+T+++ + A R +L++L E + PA Y
Sbjct: 475 AGYLKDAETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPY 534
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
V+LSNIYASAG M +R + K +K G S + ++ Q + F+ + +P+
Sbjct: 535 VMLSNIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPR 589
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 219/435 (50%), Gaps = 15/435 (3%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS--FKPNT 316
++ + G L +AR +FD MP RNE SW+++I+ Y +G +EA L+R + R S + +
Sbjct: 1 MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
FS VL+A A LK L G+ +H ++K G+++DV + NAL+ +Y+KCG + VFD
Sbjct: 61 FIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDR 120
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
I +D VVSWN+M+ G +E A +++ M + + WS +IS
Sbjct: 121 ITHRD---VVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREAL 177
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
++ EM+LS PN ST ++VL A + L G + I+ G D +GT L + Y
Sbjct: 178 ELYREMILSVR-PNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLY 236
Query: 497 AKSGDIESSRRV-FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELT 554
A+ GD+ ++R V FD M D+ +SW MV A++ E+ LF EM +K+ I+ N
Sbjct: 237 ARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWN--- 293
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+++ +G + L+ F M+ + ++P+ Y V+D + S + M
Sbjct: 294 --AMIAGFGQNGRPKQALELFRRMD-LEGLQPSRMTYCSVLDACANLTASSLGRFICDGM 350
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
E + + S C Y + E A + ++ + + Y+ G +A+
Sbjct: 351 D-EALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEAL 409
Query: 675 NVRKLMTEKGLRKSG 689
++ ++M + G+ +G
Sbjct: 410 DIFRIMVQAGVEPNG 424
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/535 (25%), Positives = 248/535 (46%), Gaps = 82/535 (15%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG +H ++K G+ ++ L L+ MY + A ++ + D+V N M++AN
Sbjct: 78 QGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRDVVSWNAMVSANA 137
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ G+LE A +++ M + + W+ +IS E+M +R
Sbjct: 138 EAGHLEVALKIYQEMVSADVLCWSTMISA--------EAMAGHDR--------------- 174
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
EAL+L+ +++ S V+PN T +++ AC + D G V ++G ++
Sbjct: 175 --------EALELYREMILS-VRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRD 225
Query: 219 VSVCNSLITLSLKMGEVDLARSV-FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V +L+ L + G+V AR V FD M+ R VVSW ++ F + + EA ++F EMP
Sbjct: 226 AVVGTTLVNLYARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMP 285
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+++ +SW+ MIA + Q+G P++A LFR+M +P+ + VL A A+L A G
Sbjct: 286 DKSVISWNAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRF 345
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+ + + KD+ ++N++ ++Y KCG + R F + +D VVSW ++I Y
Sbjct: 346 I-CDGMDEALAKDISVANSICNMYGKCGLPELARQTFLEMTYRD---VVSWTAIIAAYSQ 401
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
NG EA + +F M+ +G PN T +
Sbjct: 402 NGYSSEALD-------------------------------IFRIMVQAGVEPNGITLINT 430
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA----LTDTYAKSGDIESSRRVFDRMP 513
L A + A ++G D+ ++ G Y V + D ++G ++ + + +MP
Sbjct: 431 LSACSHGALFDEGSDIFSSLVS-GDYYGVTANESHFLCAIDLLGRAGYLKDAETLITKMP 489
Query: 514 DK-NEISWTVMV------RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
K ++WT ++ R L +G + + +LFE E + P +LS ++A
Sbjct: 490 FKAGAVAWTSLLSACRTFRDLKRAG--RVANHLFELDESSIKDPAPYVMLSNIYA 542
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 192/414 (46%), Gaps = 59/414 (14%)
Query: 6 RSLFSINPETSFNS---YIETCLCLLKDITSQNLV-----IQGRALHGHLIKT-GIHKER 56
R + S N S N+ ++E L + +++ S +++ I A+ GH + +++E
Sbjct: 124 RDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREM 183
Query: 57 YLTTR------LLIMYLGSR-KSLEANEIVKD---LNGFD--LVVHNCMINANIQWGNLE 104
L+ R ++ +R L + +V+D +G D VV ++N ++G++
Sbjct: 184 ILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVI 243
Query: 105 EAQR-LFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
A+ LFD M +R VSW A+++ F ++ RV+E+ F P ++VISW A I GF QNG
Sbjct: 244 AAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNG 303
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+AL+LF ++ G++P+ +T+ S+ ACA + LG + + +A K +SV N
Sbjct: 304 RPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMDEA-LAKDISVAN 362
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
S+ + K G +LAR F M RDVVSWT I
Sbjct: 363 SICNMYGKCGLPELARQTFLEMTYRDVVSWTAI--------------------------- 395
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
IA Y+Q+GY EA +FR M + +PN LSA + G + + ++
Sbjct: 396 ----IAAYSQNGYSSEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLV 451
Query: 344 K---IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G+ + IDL + G KD + + K A V+W S++
Sbjct: 452 SGDYYGVTANESHFLCAIDLLGRAGYLKDAETLITKMPFK--AGAVAWTSLLSA 503
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 220/666 (33%), Positives = 342/666 (51%), Gaps = 102/666 (15%)
Query: 25 LCLLKDITS-QNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN 83
L LL S QNL + +H +IKTG+H ++ ++L
Sbjct: 36 LTLLSTCKSFQNL----KQIHSQIIKTGLHNTQFALSKL--------------------- 70
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
+ C I+ +GNL A LF+ + + N+ W +I G
Sbjct: 71 -----IEFCAISP---FGNLSYALLLFESIEQPNQFIWNTMIRG---------------- 106
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
N +S + A+ ++++L GV+PN TF + K+CA++ + G
Sbjct: 107 ----NSLSSSPV-----------GAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG 151
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + K G E V SLI + + GE+ A VF + RD VS+T ++ +
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G L +ARR+F+E+P R+ VSW+ MIA Y QSG EEA F++M R + PN S VL
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVL 271
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA A +L G V + + G+ ++ + NALID+YSKCG+
Sbjct: 272 SACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGD----------------- 314
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+++A++LF+ + +++ +SW+ +I GY + A+F +M
Sbjct: 315 -----------------LDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK--LGFPYDVFLGTALTDTYAKSGD 501
S PN TF S+L A A + +L+ GK +H I K LG + L T+L D YAK G+
Sbjct: 358 QSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLT-NTSLWTSLIDMYAKCGN 416
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
IE++++VF M K+ SW M+ GLA G+A ++ LF +M P+++T + VL A
Sbjct: 417 IEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSA 476
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH+GLV+ G + F+SM Y+I P +HY C++D+L R+G EAE + +M +PD
Sbjct: 477 CSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGA 536
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W SLL C+ + N ++ E A K+L++L E+P YVLLSNIYA+AGRW D +R +
Sbjct: 537 IWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLN 596
Query: 682 EKGLRK 687
+KG++K
Sbjct: 597 DKGMKK 602
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 207/460 (45%), Gaps = 83/460 (18%)
Query: 9 FSINPETSFNSYIETCLC-----------LLKDITSQNLVIQGRALHGHLIKTGIHKERY 57
S +P + + Y+ LC LLK +G+ +HGH++K G+ + +
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
+ T L+ MY + + A + + D V +I G L++A+RLF+ +P R+
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
VSW A+I+G+ + GR EE++ +F+ ++
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQ-------------------------------EMKR 257
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
+ V PNE T ++ ACA+ LG V I G ++ + N+LI + K G++D
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDK 317
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR +F+ + ++D++SW V++ + M
Sbjct: 318 ARDLFEGICEKDIISWNVMIGGYSHMNSY------------------------------- 346
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISN 355
+EA LFR+M + + +PN F +L A A L AL G +HA++ K +G+ + +
Sbjct: 347 KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL-TNTSLWT 405
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP--- 412
+LID+Y+KCG + + VF + K + SWN+MI G ++G A ELF M
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAGMKPKSLG---SWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 413 -KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
+ +D+++ ++S +L F+ M+ +I K
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPK 502
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 216/783 (27%), Positives = 373/783 (47%), Gaps = 157/783 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L++ + + G+ +H L + + + +L+ + +Y A + ++ +
Sbjct: 12 LVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKN 71
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ N ++ A + NL+ A RLF MP+RN VS LIS ++ G +++ ++
Sbjct: 72 IFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVML 131
Query: 147 QNVIS---------------------------------------WTAAICGFVQNGFSFE 167
VI A +C + + G + +
Sbjct: 132 DGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNAD 191
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF---------------- 211
AL++F + E PNEVTF+++ A+ N + +F L+
Sbjct: 192 ALRVFRDIPE----PNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLG 247
Query: 212 -----------------------------KAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
K GFE+ + +CNSL+ + K+G++D A VF
Sbjct: 248 VCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVF 307
Query: 243 DRMEKRDVVSWTV-----------------------------------ILDVFIEMGDLG 267
+ + VVSW + +L ++ GD+
Sbjct: 308 VNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVR 367
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
R+IFD MP + SW+ +++ YNQ+ EA LFR+M P+ + +++LS+ A
Sbjct: 368 TGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCA 427
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L L +G VHA K G DV+++++LI++YSKCG+ + + VF + E D VV
Sbjct: 428 ELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELD---VVC 484
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WNSM+ G+ +N ++A F M +Q G
Sbjct: 485 WNSMLAGFSINSLGQDALSFFKKM------------------RQL-------------GF 513
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P++ +F++V+ + A ++SL +G+ H +I+K GF D+F+G++L + Y K GD+ +R
Sbjct: 514 FPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARC 573
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
FD MP +N ++W M+ G A++G ++ L+ +M + P+++T ++VL ACSHS L
Sbjct: 574 FFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSAL 633
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
VD+GL+ FN+M Y + P HYTC++D LSR+GR +E E +++MP + D+ W +L
Sbjct: 634 VDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVL 693
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
S C+ + N +A+RA + L++L ++ A YVLL+N+Y+S G+W DA VR LM+ +RK
Sbjct: 694 SSCRIHANLSLAKRAAEELYRLDPQNSASYVLLANMYSSLGKWDDAHVVRDLMSHNQVRK 753
Query: 688 SGG 690
G
Sbjct: 754 DPG 756
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 213/457 (46%), Gaps = 40/457 (8%)
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K + +++ + C G V +F+ + N I L K + A
Sbjct: 3 KSKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACH 62
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VFD + +++ SW IL + + +L A R+F +MP+RN VS + +I+ + GY +A
Sbjct: 63 VFDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQA 122
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+ + P+ F+ V SA SL G H V+K+G+E ++++ NAL+ +
Sbjct: 123 LDTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCM 182
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----ND 416
Y+KCG D VF I E + V++ +M+GG Q++EA ELF M ++ +
Sbjct: 183 YAKCGLNADALRVFRDIPEPN---EVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDS 239
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VS S+++ G + D+ G ST + +GK +H
Sbjct: 240 VSLSSML-GVCAKGERDV-----------GPCHGISTNA-------------QGKQMHTL 274
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+KLGF D+ L +L D YAK GD++S+ +VF + + +SW +M+ G ++++
Sbjct: 275 SVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKA 334
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ M+ P+++T +++L AC SG V G + F+ M P+ + ++
Sbjct: 335 AEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPC-----PSLTSWNAILS 389
Query: 597 MLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGC 630
+++ EA + M F+ PD A +LS C
Sbjct: 390 GYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSC 426
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 227/728 (31%), Positives = 354/728 (48%), Gaps = 108/728 (14%)
Query: 27 LLKDITSQNLVIQ----GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
+L + S + IQ G LH +IK G H E Y+ L+ +Y SRK + A I +
Sbjct: 263 VLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTM 322
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PERNEV--------SWTALISGF 128
N D V +N +I+ +Q G + A LF M P+ V S AL G
Sbjct: 323 NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGM 382
Query: 129 MKHGR-------------------------VEESMWYFERNPFQNVISWTAAICGFVQNG 163
H VE + +F +N++ W + + Q
Sbjct: 383 QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLD 442
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
++ ++F ++ G+ PN+ T+ SI + C + LG + + K GF+ +V VC
Sbjct: 443 NLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC- 501
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+V++D++ + G L A RI +PE + VS
Sbjct: 502 ------------------------------SVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W+ MIA Y Q EA +LF +M + + F+ +SA A ++ALR G +HA
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
G D+ I+NALI LY++CG +++E
Sbjct: 592 AAGFGADLSINNALISLYARCG----------------------------------RIQE 617
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A F+ + +N++SW++++SG + F+ VF ML + N T+ S + A+AS
Sbjct: 618 AYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAAS 677
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
+A++++G+ +H ++K G+ + + +L YAKSG I + R F+ M ++N ISW M
Sbjct: 678 LANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAM 737
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ G ++ G E++ LFEEM+ I PN +T + VL ACSH GLV +GL YF SM I++
Sbjct: 738 ITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHD 797
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ P HY CVVD+L R+G+L A ++I MP D+ W +LLS C +KN +I ERA
Sbjct: 798 LVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAA 857
Query: 644 KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+L +L E A YVL+SNIYA + +WI RKLM + G++K G SW+EV+N VH F
Sbjct: 858 HHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAF 917
Query: 704 FQKTDHNP 711
+ +P
Sbjct: 918 YAGDKLHP 925
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 152/594 (25%), Positives = 256/594 (43%), Gaps = 98/594 (16%)
Query: 49 KTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQR 108
+T +H E+ + R+ +M + + +N + ++ C+ + G+L E R
Sbjct: 30 QTTLHMEQGKSKRIQLMNFMEERGVRSN-----YQNYLWLLEGCLTS-----GSLFETMR 79
Query: 109 L--------FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
L FDG P + +L+ + +HG ++ F+ N ++V SW I FV
Sbjct: 80 LHCRISKSGFDGEP----LLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFV 135
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN-DFRLGLSVFGLIFKAGFEKHV 219
+F+ LF ++L G+ PN TF+ + KAC + F V F GF+
Sbjct: 136 AQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSP 195
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N LI L K G ++ A+ VF+ + +D+V+W
Sbjct: 196 LVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWV------------------------- 230
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
MI+ +Q+G EEA LF M P S VLSA ++ G +H
Sbjct: 231 ------AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLH 284
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
V+K G + ++ N L+ LYS+ + +F ++ +D VS+NS+I G G
Sbjct: 285 CLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD---GVSYNSLISGLVQQG 341
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+ A ELF M +R+ + P+ T +S+L
Sbjct: 342 FSDRALELFTKM-QRDCLK------------------------------PDCITVASLLS 370
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A ASV +L KG LH IK G D+ L +L D Y+K D+E++ + F +N +
Sbjct: 371 ACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVL 430
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W VM+ + +S +F +M+ + PN+ T S+L C+ G + Y
Sbjct: 431 WNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL-----YLGEQI 485
Query: 580 PIYNIKPNGRH--YTC--VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ IK + Y C ++DM ++ G+L+ A + +P E D +W ++++G
Sbjct: 486 HTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAG 538
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 225/534 (42%), Gaps = 111/534 (20%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T LL S + +G LH H IK G+ + L LL +Y A++
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT 423
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMP---------------------------- 114
++V+ N M+ A Q NL ++ +F M
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 115 -----------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ N + LI + K+G++ ++ R P +V+SWTA I G+VQ+
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EAL+LF ++ G++ + + F+S ACA I R G + + AGF +S+ N
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+LI+L + G + A F+++ ++ +SW
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISW------------------------------ 633
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+ +++ QSGY EEA ++F +M R + N + +SA ASL ++ G +H+ VL
Sbjct: 634 -NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVL 692
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K G + + +SN+LI LY+K G D F+ + E++ V+SWN+MI GY +G E
Sbjct: 693 KTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERN---VISWNAMITGYSQHGCGME 749
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A LF+ EM + G +PN TF VL A +
Sbjct: 750 ALRLFE-------------------------------EMKVCGIMPNHVTFVGVLSACSH 778
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGT----ALTDTYAKSGDIESSRRVFDRMP 513
+ +++G D + K+ +D+ + + D ++G ++ + MP
Sbjct: 779 IGLVKEGLDYFESMFKI---HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMP 829
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 2/230 (0%)
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+ N M G N + +L + SL + LH +I K GF + L +L D Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
+ GD + +VFD +++ SW M+ + LF M ITPN T
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL AC + +K +S Y + ++D+ S++G + A+ N + +
Sbjct: 165 VLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK 224
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
D W +++SG E+ A ++ +E P YVL S + AS
Sbjct: 225 -DIVTWVAMISGLSQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSAST 272
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 211/721 (29%), Positives = 353/721 (48%), Gaps = 105/721 (14%)
Query: 31 ITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVH 90
+ +++L + G+ +H H+++ G+ Y+ LL +Y+ EA + + +V
Sbjct: 55 VKAKDLAV-GKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSW 113
Query: 91 NCMINANIQWGNLEEAQRLFDGM------PER---------------------------- 116
N MI+ G +EA LF M P++
Sbjct: 114 NVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVME 173
Query: 117 -----NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
N ALIS + K G V ++ F+ ++ +SWT + ++G++ E+LK
Sbjct: 174 AGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKT 233
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
+ +L+ GV+P+ +T+ ++ AC + G + I ++ E H
Sbjct: 234 YHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVES--EHH------------- 278
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
DV T + ++I+ G + +AR +F+ +P R+ ++W+ MI
Sbjct: 279 ----------------SDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGL 322
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
SG EEA +F +M + P+ + +LSA A L G +HA +K G+ DV
Sbjct: 323 VDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDV 382
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
NALI++YSK G M++A+++FD M
Sbjct: 383 RFGNALINMYSKAG----------------------------------SMKDARQVFDRM 408
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
PKR+ VSW+A++ GY + Q F+ F +ML G NK T+ VL A ++ +L+ GK
Sbjct: 409 PKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGK 468
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H +++K G D+ + AL Y K G +E + RV + M ++ ++W ++ GLA++G
Sbjct: 469 EIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNG 528
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
E++ FE M+ + PN T ++V+ AC LV++G + F SM Y I P +HY
Sbjct: 529 RGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHY 588
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
C+VD+L+R+G L EAED I +MPF+P + W +LL+ C+ + N +I E+A + KL
Sbjct: 589 ACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEP 648
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++ YV LS IYA+AG W D +RKLM E+G++K G SW+EV +VH F +P
Sbjct: 649 QNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHP 708
Query: 712 K 712
+
Sbjct: 709 R 709
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 222/455 (48%), Gaps = 67/455 (14%)
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L + G + + + + ++C + D +G V I + G + +V + N+L+ L + G
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
V+ AR +FD+ + VVSW +VMI+ Y
Sbjct: 95 VNEARRLFDKFSNKSVVSW-------------------------------NVMISGYAHR 123
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G +EAF LF M + +P+ F +LSA +S AL G VH V++ G+ + +
Sbjct: 124 GLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NALI +Y+KCG +D R VFD++ +D VSW ++ G Y +G +E+
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRD---EVSWTTLTGAYAESGYAQES---------- 230
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
++ ML G P++ T+ +VL A S+A+LEKGK +H
Sbjct: 231 ---------------------LKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
+I++ DV + TALT Y K G ++ +R VF+ +P+++ I+W M+ GL +SG +
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLE 329
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E+ +F M K + P+ +T L++L AC+ G + G K ++ + + R +
Sbjct: 330 EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACG-KEIHARAVKDGLVSDVRFGNAL 388
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++M S++G + +A + MP + D +W +L+ G
Sbjct: 389 INMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGG 422
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ +L + L GK +H I++ G +V++ L Y G + +RR+FD+
Sbjct: 47 YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFS 106
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+K+ +SW VM+ G A G +E+ NLF M++ + P++ T +S+L ACS ++ G +
Sbjct: 107 NKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGRE 166
Query: 574 -YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
+ ME + N ++ M ++ G + +A ++M D +W +L
Sbjct: 167 VHVRVMEA--GLANNATVGNALISMYAKCGSVRDARRVFDAMASR-DEVSWTTLTGA--- 220
Query: 633 YKNEQIAERAVKNLWKLAEE 652
Y A+ ++K + +E
Sbjct: 221 YAESGYAQESLKTYHAMLQE 240
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 66/218 (30%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +C+LK ++ + G+ +H ++K GI
Sbjct: 450 TYMCVLKACSNPVALKWGKEIHAEVVKAGIFA---------------------------- 481
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
DL V N +++ + G++E+A R+ +GM R+ V+W LI G
Sbjct: 482 ---DLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGL-------------- 524
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
QNG EAL+ F + ++PN TF ++ AC N
Sbjct: 525 -----------------AQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEE 567
Query: 203 GLSVFGLIFK----AGFEKHVSVCNSLITLSLKMGEVD 236
G F + K EKH + ++ + +GE +
Sbjct: 568 GRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAE 605
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 332/646 (51%), Gaps = 77/646 (11%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G ++ + N ++ + G L++A ++FD + ER
Sbjct: 159 GSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK-------------------------- 192
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKL---LESGVKPNEVTFSSICKACAEINDF 200
++++SW + + +VQ G S AL++ ++ ++P+ +T +I ACA +
Sbjct: 193 --IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFAL 250
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+ G V G + G V V N+L+++ K +++ A VF+ ++K+DVVSW ++ +
Sbjct: 251 QHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGY 310
Query: 261 IEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
++G A +F M E + ++WS +IA Y Q G+ EA +FRQM Y +PN
Sbjct: 311 SQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNV 370
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGI-------EKDVFISNALIDLYSKCGETKD 369
+ +LS AS+ AL G HA+V+K + E D+ + N LID+Y+KC +
Sbjct: 371 VTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRV 430
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
R +FDSI KD +N V+W+ +I GY +H
Sbjct: 431 ARSIFDSIEGKD--------------------------------KNVVTWTVMIGGYAQH 458
Query: 430 KQFDLVFAVFNEMLL--SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV- 486
+ + +F ++ + PN T S L A A + L G+ LH ++ +V
Sbjct: 459 GEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVL 518
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
++G L D Y+KSGDI+++R VFD M +N +SWT ++ G G +E+++LF++M+K
Sbjct: 519 YVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKL 578
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ +T L VL+ACSHSG+VD+G+ YF+ M + I P HY C+VD+L R+GRL+E
Sbjct: 579 GFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNE 638
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A + I +M EP + W +LLS + + N ++ E A L +L E+ Y LLSN+YA+
Sbjct: 639 AMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYAN 698
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A RW D +R LM G+RK GCSW++ + FF +P+
Sbjct: 699 ARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPE 744
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 254/535 (47%), Gaps = 72/535 (13%)
Query: 125 ISGFMKHGRVEESMWYFER--NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+ +++ G E++ +R V W A I V+ G + L + ++ G P
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ TF + KAC EI R G SV ++ G +V +CNS++ + + G +D A +F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 243 DRMEKR---DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
D + +R D+VSW IL A Y Q G
Sbjct: 186 DEVLERKIEDIVSWNSIL-------------------------------AAYVQGGQSRT 214
Query: 300 AFRL-FRQMTRYSFK--PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
A R+ FR YS K P+ +L A AS+ AL+ G VH ++ G+ DVF+ NA
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP---- 412
L+ +Y+KC + + VF+ I +KD VVSWN+M+ GY G + A LF M
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKD---VVSWNAMVTGYSQIGSFDSALSLFKMMQEEDI 331
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
K + ++WSA+I+GY + VF +M L G PN T +S+L ASV +L GK
Sbjct: 332 KLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQ 391
Query: 473 LHGKIIK--LGFPY-----DVFLGTALTDTYAKSGDIESSRRVFDRM--PDKNEISWTVM 523
H +IK L + D+ + L D YAK +R +FD + DKN ++WTVM
Sbjct: 392 THAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVM 451
Query: 524 VRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKG-------LKY 574
+ G A+ G A +++ LF ++ +KTS+ PN T+ L AC+ G + G L+
Sbjct: 452 IGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRN 511
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
N E +Y C++DM S+SG + A ++M + +W SL++G
Sbjct: 512 ENESEVLYV-------GNCLIDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLMTG 558
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 177/391 (45%), Gaps = 81/391 (20%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
G+ +HG ++ G+ + ++ L+ MY K EAN++ + + D+V N M+
Sbjct: 252 HGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYS 311
Query: 99 QWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
Q G+ + A LF M E + ++W+A+I+
Sbjct: 312 QIGSFDSALSLFKMMQEEDIKLDVITWSAVIA---------------------------- 343
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
G+ Q G FEAL +F ++ G++PN VT +S+ CA + G + K
Sbjct: 344 ---GYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNI 400
Query: 215 F-------EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD--VVSWTVILDVFIEMGD 265
E + V N LI + K +ARS+FD +E +D VV+WTV
Sbjct: 401 LNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTV---------- 450
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM--TRYSFKPNTSCFSIVL 323
MI Y Q G +A +LF Q+ + S KPN S L
Sbjct: 451 ---------------------MIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCAL 489
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDV-FISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
A A L LR G +HA+ L+ E +V ++ N LID+YSK G+ R VFD++ +
Sbjct: 490 MACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNM---KL 546
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+VVSW S++ GYG++G+ EEA LFD M K
Sbjct: 547 RNVVSWTSLMTGYGMHGRGEEALHLFDQMQK 577
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 217/724 (29%), Positives = 361/724 (49%), Gaps = 107/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL+ S+N +I + +HG +I +G+ + +L L+ + S + A + + +
Sbjct: 55 LLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKN 114
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER-----NEVSW-------------------- 121
L+ + M++ Q G EEA +F + + NE
Sbjct: 115 LITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLH 174
Query: 122 ---------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
T+LI + K+G +EE+ F++ + ++WT I G+ + G S
Sbjct: 175 GFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSA 234
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+L+LF ++ E+ V P+ SS+ AC+ + G + + + G E VSV N
Sbjct: 235 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVN--- 291
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
V++D + + + R++FD+M +N +SW+
Sbjct: 292 ----------------------------VLIDFYTKCNRVKAGRKLFDQMVVKNIISWTT 323
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MI+ Y Q+ + EA +LF +M R +KP+ + VL++ S +AL G VHA+ +K
Sbjct: 324 MISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKAN 383
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+E D F+ N LID+Y+K L+ D AK+
Sbjct: 384 LESDEFVKNGLIDMYAK------SNLLID----------------------------AKK 409
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
+FD M ++N +S++A+I GY ++ +F+EM + + PN+ TF++++ A++++AS
Sbjct: 410 VFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLAS 469
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L G+ H +++K+G + F+ AL D YAK G IE +R++F+ ++ + W M+
Sbjct: 470 LRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIST 529
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
A+ G A+E++ +F EM K I PN +T ++VL ACSH+G V+ GL +FNSM P + IKP
Sbjct: 530 HAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKP 588
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
HY CVV +L RSG+L EA++FI MP EP + W SLLS C+ N ++ + A +
Sbjct: 589 GTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMA 648
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
+ Y+LLSNI+AS G W D VR M + K G SW+EV N+V+ F +
Sbjct: 649 ISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIAR 708
Query: 707 -TDH 709
T H
Sbjct: 709 DTTH 712
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 205/455 (45%), Gaps = 76/455 (16%)
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
++P F+++ + N + G I +G + + N LI + K VD AR
Sbjct: 45 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 104
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
VFD+M +++++W S M++ Y+Q GY EE
Sbjct: 105 VVFDKMPHKNLITW-------------------------------SSMVSMYSQQGYSEE 133
Query: 300 AFRLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A +F + R S + PN + V+ A L + G +H V++ G ++DV++ +LI
Sbjct: 134 ALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLI 193
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D YSK G ++ RLVFD + EK V+W ++I GY G+ + ELF M + N V
Sbjct: 194 DFYSKNGNIEEARLVFDQLSEKT---AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV- 249
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
P++ SSVL A + + LE GK +H ++
Sbjct: 250 ------------------------------PDRYVVSSVLSACSMLEFLEGGKQIHAYVL 279
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ G DV + L D Y K +++ R++FD+M KN ISWT M+ G ++ + E++
Sbjct: 280 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 339
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV---- 594
LF EM + P+ SVL +C +++G + Y IK N V
Sbjct: 340 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVH-----AYTIKANLESDEFVKNGL 394
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+DM ++S L +A+ + M E + ++ +++ G
Sbjct: 395 IDMYAKSNLLIDAKKVFDVMA-EQNVISYNAMIEG 428
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 47/266 (17%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
C +L S+ + QGR +H + IK + + ++ L+ MY S ++A ++ +
Sbjct: 355 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 414
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISG----------- 127
+++ +N MI L EA LF M R NE ++ ALI+
Sbjct: 415 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQ 474
Query: 128 ------------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ K G +EE+ F + +++V+ W + I Q+G
Sbjct: 475 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 534
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF----GLIFKAGFEKHV 219
+ EAL +F ++++ G++PN VTF ++ AC+ GL+ F G K G E +
Sbjct: 535 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYA 594
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRM 245
V ++L + G++ A+ ++M
Sbjct: 595 CV----VSLLGRSGKLFEAKEFIEKM 616
>gi|325260820|gb|ADZ04639.1| hypothetical protein [Oryza glaberrima]
Length = 674
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 322/607 (53%), Gaps = 36/607 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + + G L +AQ LFD MP R+ +SWTAL++ + G + + F+ P +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + +++ A LF K+ N V++ +I A+ V+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKM----PAKNAVSYGAIISGLAKAEMLHEAELVYE-- 155
Query: 211 FKAGFEKHVSV-CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ ++ V N+L+ L++GE+ +A VF+ M RDV+SW+ ++D + G + EA
Sbjct: 156 -EMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEA 214
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
RR+FD MPERN VSW+ MI Y + G + LF M R + NT+ S+ L A A
Sbjct: 215 RRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAVA 274
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV------- 382
R G+ +H ++ +G E D+F+ +++I +YS+ G D + FD + +KD+
Sbjct: 275 SLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLI 334
Query: 383 -----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
AHV VSW SM+ G+ G M E+ ELF+ MP +++V+W+A
Sbjct: 335 TGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTA 394
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IIS ++ + + F M G PN FS +L A AS+A L +G+ H I +G
Sbjct: 395 IISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMG 454
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ +D + T+L YAK G + + VF + + + I+ M+ + G+ ++++ LF
Sbjct: 455 WVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFT 514
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M+ PN +T L +L C+ +G V +G YF SM P+Y ++PN HYTC+VD+L R+
Sbjct: 515 KMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRA 574
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L+EA + INSMP S+AWA+LLS + N A+ A + L + Y +LS
Sbjct: 575 GLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLS 634
Query: 662 NIYASAG 668
+++SAG
Sbjct: 635 RMFSSAG 641
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 243/519 (46%), Gaps = 70/519 (13%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N ++ ++ G L A R+F+GM R+ +SW+A++ G KHG V E+ F+ P
Sbjct: 163 DPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMP 222
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SWT+ I G+V+ G + L LFL + GV+ N T S ACA + R G+
Sbjct: 223 ERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAVASLAREGIQ 282
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE--- 262
+ LI GFE + + +S+I + + G + A+ FD M+++D+VSW ++ +++
Sbjct: 283 IHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDM 342
Query: 263 ----------------------------MGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
G + E+ +F++MP ++EV+W+ +I+ + +
Sbjct: 343 VEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITN 402
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G A R F +M++ KPNT FS +LSALASL L G HA+ + +G D +
Sbjct: 403 GDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH 462
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+ +Y+KCG + VF SI +++ NSMI + +G +E+A +LF M
Sbjct: 463 TSLVSMYAKCGRLAEAYHVFSSISNPS---LIAINSMITAFVQHGFVEDALKLFTKMQN- 518
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+G PN TF +L A +++G +
Sbjct: 519 ------------------------------AGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 475 GKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLA-ESG 531
+ + G + T + D ++G + + + + MP + +W ++ + S
Sbjct: 549 ESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSN 608
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
A I + +EK T+LS +F S +G+ D+
Sbjct: 609 LAFAKIAAQKLLEKDPYDATAYTVLSRMF--SSAGMEDE 645
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 172/372 (46%), Gaps = 34/372 (9%)
Query: 35 NLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMI 94
+L +G +H +I G + +L ++IMY ++A + D+V N +I
Sbjct: 275 SLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLI 334
Query: 95 NANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
+Q +EEA LF M +++ VSWT+++ GF G + ES+ FE+ P ++ ++WTA
Sbjct: 335 TGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTA 394
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I F+ NG A++ F ++ + G KPN + FS + A A + + G
Sbjct: 395 IISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLA-----------MLNQG 443
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+ H S+ MG VFD +VS ++ + G L EA +F
Sbjct: 444 RQAH--------AYSINMGW------VFDSAVHTSLVS------MYAKCGRLAEAYHVFS 483
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+ + ++ + MI + Q G+ E+A +LF +M +KPN F +L+ A ++
Sbjct: 484 SISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQ 543
Query: 335 GMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G + + + G+E + ++DL + G + + +S+ + D H +W +++
Sbjct: 544 GYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQND--HSDAWAALLS 601
Query: 394 GYGLNGQMEEAK 405
L+ + AK
Sbjct: 602 ASSLHSNLAFAK 613
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
CLL + S ++ QGR H + I G + + T L+ MY + EA + ++
Sbjct: 429 CLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNP 488
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYF 141
L+ N MI A +Q G +E+A +LF M + N V++ +++G + G V++ YF
Sbjct: 489 SLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 142 E 142
E
Sbjct: 549 E 549
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 210/628 (33%), Positives = 323/628 (51%), Gaps = 96/628 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++ V ++N + G + +A+R+FD MP RN VSW A++SG+ G+ E
Sbjct: 157 NVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYAT-GKCSE--------- 206
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLF-LKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
EA +LF L L E ++ NE +++ A + +G+
Sbjct: 207 ---------------------EAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGV 245
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ GL+ K G VSV NSL+T+ K +D A +VF ++R+ ++W
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITW----------- 294
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
S MI Y Q+G + A +F QM F P F +L+
Sbjct: 295 --------------------SAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILN 334
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + + AL G H ++K+G E+ V++ +AL+D+Y+KCG T D + F + DV
Sbjct: 335 ASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLY--DVDD 392
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VV W +MI G+ NG+ EEA L+ M K
Sbjct: 393 VVIWTAMITGHVQNGEHEEALMLYSRMDKE------------------------------ 422
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G +P+ T +SVL A A +A+LE GK LH +I+K GF +GTAL+ Y+K G++E
Sbjct: 423 -GVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLED 481
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
S VF RMPD++ ISW ++ G ++ G +++++LFEEM+ I P+ +T ++VL ACSH
Sbjct: 482 SMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSH 541
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
GLVD+G YF +M Y + P HY C+VD+LSR+G+L EA+DFI S+ + + W
Sbjct: 542 MGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWR 601
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+L C++ ++ + A + L +L E + Y+LLSNIYA+ +W D VR LM +G
Sbjct: 602 IVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRG 661
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ K GCSWVE+ NQV+ F +P+
Sbjct: 662 VSKDPGCSWVELNNQVNVFVVGEQQHPE 689
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 214/516 (41%), Gaps = 114/516 (22%)
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
A + + R G ++ G K+G H V NSLIT F R +
Sbjct: 23 AASSVRTRRAGDALHGWALKSGAASHTPVSNSLIT--------------FYCSPPRPL-- 66
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPE--RNEVSWSVMIARYNQSGYPEEAFRLFRQM--T 308
LG A +F ++P R+ SW+ ++ ++ P A FR M +
Sbjct: 67 -------------LGAAFAVFADIPAGLRDVASWNSLLNPLSRH-QPLAALSHFRSMMSS 112
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI---GIEKDVFISNALIDLYSKCG 365
+ P F+ V +A A + + +G HA K+ +VF+S AL+++Y K G
Sbjct: 113 TDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLG 172
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK-----RNDVSWS 420
D R VFD + ++ VSW +M+ GY EEA ELF M + +N+ +
Sbjct: 173 AISDARRVFDQMPHRN---AVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVAT 229
Query: 421 AIISG-----------------------------------YLEHKQFDLVFAVFN----- 440
A++S Y + + D AVF
Sbjct: 230 AVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKER 289
Query: 441 --------------------------EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+M +G P + TF +L AS+ + +L GK H
Sbjct: 290 NSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAH 349
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGYA 533
G ++KLGF V++ +AL D YAK G ++ F ++ D +++ WT M+ G ++G
Sbjct: 350 GLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEH 409
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+E++ L+ M+K + P+ LT+ SVL AC+ ++ G K ++ G T
Sbjct: 410 EEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPG-KQLHAQILKCGFGLGGSVGTA 468
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ M S+ G L ++ MP + D +W S++SG
Sbjct: 469 LSTMYSKCGNLEDSMVVFRRMP-DRDIISWNSIISG 503
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEAN-----EIVKDLNGFDLVVHNCMINAN 97
L+ + K G+ YLT ++ +LE +I+K G V +
Sbjct: 415 LYSRMDKEGVMPS-YLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMY 473
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV----ISWT 153
+ GNLE++ +F MP+R+ +SW ++ISGF +HGR +++ FE + + I++
Sbjct: 474 SKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFI 533
Query: 154 AAIC-----GFVQNG-FSFEAL 169
+C G V G F F A+
Sbjct: 534 NVLCACSHMGLVDRGWFYFRAM 555
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 210/724 (29%), Positives = 348/724 (48%), Gaps = 104/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L QGR +H + K E ++ L+ +YLG A + D+ D
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PER------------------------ 116
V N +I+ + Q G+ E A ++FD M P+
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269
Query: 117 ---------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
+ ++ +L+ ++K G +E + F NV+ W + + Q +
Sbjct: 270 YLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ ++F ++ +G+ PN+ T+ I + C LG + L K GFE + V
Sbjct: 330 SFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG---- 385
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
V++D++ + L +AR+I + + +R+ VSW+ M
Sbjct: 386 ---------------------------VLIDMYSKYRCLDKARKILEMLEKRDVVSWTSM 418
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q + EEA F++M P+ + SA A +KA+R G+ +HA V G
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D+ I WN+++ Y G+ EEA L
Sbjct: 479 AADISI----------------------------------WNTLVNLYARCGRSEEAFSL 504
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F + +++++W+ +ISG+ + + ++ VF +M +G N TF S + A A++A +
Sbjct: 505 FREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADI 564
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +HG+ +K G + + AL Y K G IE ++ +F M +NE+SW ++
Sbjct: 565 KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSC 624
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ G E+++LF++M++ + PN++T + VL ACSH GLV++GL YF SM +Y + P
Sbjct: 625 SQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPI 684
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CVVD+L R+G+L A F++ MP ++ W +LLS CK +KN +I E A K+L
Sbjct: 685 PDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLL 744
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L A YVLLSN YA G+W + VRK+M ++G+RK G SW+EV+N VH FF
Sbjct: 745 ELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGD 804
Query: 708 DHNP 711
+P
Sbjct: 805 RLHP 808
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/528 (24%), Positives = 239/528 (45%), Gaps = 70/528 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K+G V ++ F+ ++ +SW A + G+ Q G EA +L+ ++ + V P
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPT 143
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
SS+ AC + F G + ++K F V N+LI L L G LA VF
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M D V++ ++ G A+ G+ E A ++
Sbjct: 204 DMLFCDRVTFNTLIS--------GHAQ-----------------------CGHGECALQI 232
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M +P+ + +L+A AS+ L+ G +H+++LK G+ D +L+DLY K
Sbjct: 233 FDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVK 292
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ + +F+ D +VV WN M+ YG + +D++ S
Sbjct: 293 CGDIETAHDIFNL---GDRTNVVLWNLMLVAYG----------------QISDLAKS--- 330
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
F +F +M +G PNK T+ +L +E G+ +H IK GF
Sbjct: 331 ------------FEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D+++ L D Y+K ++ +R++ + + ++ +SWT M+ G + + +E++ F+EM
Sbjct: 379 SDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + P+ + + S AC+ + +GL+ ++ + + + +V++ +R GR
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQ-IHARVYVSGYAADISIWNTLVNLYARCGR 497
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
EA + + D W L+SG + ++ E+A+ K+++
Sbjct: 498 SEEAFSLFREIDHK-DEITWNGLISG---FGQSRLYEQALMVFMKMSQ 541
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 187/389 (48%), Gaps = 39/389 (10%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+++D++ + G + +AR++F E+ R+ VSW M++ Y Q G +EAFRL+ QM + P
Sbjct: 83 LLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIP 142
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
S VLSA K G +HA V K + F+ NALI LY L F
Sbjct: 143 TPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY----------LGF 192
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
G + A+ +F +M + V+++ +ISG+ + +
Sbjct: 193 ------------------------GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGEC 228
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F+EM LSG P+ T +S+L A ASV L+KGK LH ++K G +D +L D
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K GDIE++ +F+ N + W +M+ + +S +F +M+ T I PN+ T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L C+ +G ++ G + +S+ + + ++DM S+ L +A + M
Sbjct: 349 YPCILRTCTCTGQIELG-EQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILE-M 406
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ D +W S+++G Y E A+
Sbjct: 407 LEKRDVVSWTSMIAG---YVQHDFCEEAL 432
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 41/280 (14%)
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+ +HA + G+ D I N LIDLY+K
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAK-------------------------------- 90
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
NG + +A+++F + R+ VSW A++SGY + F ++++M + IP S
Sbjct: 91 --NGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLS 148
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
SVL A +G+ +H ++ K F + F+G AL Y G + + RVF M
Sbjct: 149 SVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFC 208
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-- 573
+ +++ ++ G A+ G+ + ++ +F+EM+ + + P+ +T+ S+L AC+ G + KG +
Sbjct: 209 DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLH 268
Query: 574 -YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
Y ++ G ++D+ + G + A D N
Sbjct: 269 SYLLKAGMSFDYITEGS----LLDLYVKCGDIETAHDIFN 304
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 210/624 (33%), Positives = 344/624 (55%), Gaps = 35/624 (5%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
EA + ++ + V N M+ A Q G +E+A+ LFD MP RNE SWT ++S +++ G
Sbjct: 60 EARRLFDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGE 119
Query: 134 VEESMWYFERNPFQNVIS-WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
+ + +R P + + + I G+ +NG +A + LL+ P+ V+++S+
Sbjct: 120 LTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDA----IALLQEMPAPDIVSWNSVLG 175
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
I + + SV F +K + N ++ ++ G++D+A + F R+ +V+S
Sbjct: 176 GL--IRNEEISRSV--QFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVIS 231
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W +++ + + G +GEAR +FD MPERN V+W+V+++ Y Q E A+ LF +M +
Sbjct: 232 WVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNS 291
Query: 313 KPNTSCFS------------IVLSALASLKA----------LRSGMHVHAHVLKIGI-EK 349
T+ S VLS + S L+S + A L GI +
Sbjct: 292 ISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVR 351
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D N +I Y +CG + ++F + KD ++SWN+MI G GQ+ +A +F
Sbjct: 352 DAVCWNTMISGYVQCGMLDEAMVLFQQMPNKD---MISWNTMIAGCAQGGQIRKAASIFR 408
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M +RN VSW++IISG++++ F F M + + T++ L ASA++A+L+
Sbjct: 409 KMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQI 468
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
G+ H +++ GF D G AL YAK G + +R+VFD M ++ +SW ++ G A
Sbjct: 469 GRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYAS 528
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
+G E I +F EME S+ P+E+T++ VL ACSH+GL+D+GL +FNSM +Y++KP
Sbjct: 529 NGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAE 588
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
HYTC+VD+L R+GRL EA + + M +P++ W +LL C+ +KN +IA A + L++L
Sbjct: 589 HYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFEL 648
Query: 650 AEEHPAGYVLLSNIYASAGRWIDA 673
+ YVLLSNI AG+W DA
Sbjct: 649 EPCKASNYVLLSNICVEAGKWDDA 672
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 257/564 (45%), Gaps = 86/564 (15%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
++ + G++ + FE P +NV+S+ A + +G EA +LF ++ + N
Sbjct: 18 LTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEM----PRRNP 73
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
V+++++ AC++ G V+ AR +FD
Sbjct: 74 VSWNTMMVACSQ-----------------------------------HGRVEDARGLFDA 98
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEEAFRL 303
M R+ SWT+++ ++ G+L AR + D MP E+ ++ MI+ Y ++G E+A L
Sbjct: 99 MPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIAL 158
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
++M P+ ++ VL L + + + + +KD+ N +++ Y +
Sbjct: 159 LQEMP----APDIVSWNSVLGGLIRNEEISRSVQFFDEM----PDKDLVSWNLMLEGYVR 210
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G+ F I + V+SW +++ GY G+M EA+ELFD MP+RN V+W+ ++
Sbjct: 211 AGDLDVASAFFSRIPSPN---VISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLL 267
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS--LEKGKDLHGKIIKLG 481
SGY++ Q + + +F EM P K++ S S V S L++ KD+ K+
Sbjct: 268 SGYVQFSQVEAAYNLFIEM------PEKNSISWTTMVSGFVRSGKLQEAKDVLSKM---- 317
Query: 482 FPYD-VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
P D V TAL Y KS I+ +R++FD + ++ + W M+ G + G E++ LF
Sbjct: 318 -PSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLF 376
Query: 541 EEMEKTSITPNELTIL--SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
++M PN+ I +++ C+ G + K F M+ + N + ++
Sbjct: 377 QQM------PNKDMISWNTMIAGCAQGGQIRKAASIFRKMK-----RRNTVSWNSIISGF 425
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAW---ASLLSGCKTYKNEQIAERAVKNLWK---LAEE 652
++G EA M + S W A LS QI + L + +++
Sbjct: 426 VQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDS 485
Query: 653 HPAGYVLLSNIYASAGRWIDAMNV 676
P G L+S YA GR ++A V
Sbjct: 486 SP-GNALIS-AYAKCGRMLEARQV 507
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 210/458 (45%), Gaps = 79/458 (17%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLT------TRLLIMYLGSRKSLEANEIVKDL 82
KD+ S NL+++G G L R + L+ Y + + EA E+ +
Sbjct: 196 KDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRM 255
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++V N +++ +Q+ +E A LF MPE+N +SWT ++SGF++ G+++E+
Sbjct: 256 PERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLS 315
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P NV + TA + G++++ +A +LF G+ V ++C
Sbjct: 316 KMPSDNVGAKTALMHGYLKSNLIDDARQLF-----DGI----VVRDAVC----------- 355
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
N++I+ ++ G +D A +F +M +D++SW ++ +
Sbjct: 356 -------------------WNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQ 396
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + +A IF +M RN VSW+ +I+ + Q+G EA + F M R + + ++
Sbjct: 397 GGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACC 456
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LSA A+L L+ G H+ +++ G D NALI Y+KCG + R VFD +V +D
Sbjct: 457 LSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQD- 515
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+VSWN++I GY NG E V AVF EM
Sbjct: 516 --IVSWNALIDGYASNGNGSE-------------------------------VIAVFREM 542
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+ P++ T VL A + +++G +IKL
Sbjct: 543 EANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKL 580
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 149/304 (49%), Gaps = 8/304 (2%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T L+ YL S +A ++ + D V N MI+ +Q G L+EA LF MP ++ +
Sbjct: 326 TALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMI 385
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +I+G + G++ ++ F + +N +SW + I GFVQNG EAL+ F+ +
Sbjct: 386 SWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDA 445
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ T++ A A + ++G L+ + GF S N+LI+ K G + AR
Sbjct: 446 KSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEAR 505
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSG 295
VFD M +D+VSW ++D + G+ E +F EM +E++ V+++ + +G
Sbjct: 506 QVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAG 565
Query: 296 YPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
+E F M + YS KP ++ ++ L LR + V + I+ + +
Sbjct: 566 LIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFEL---VQGMQIQPNAGVW 622
Query: 355 NALI 358
AL+
Sbjct: 623 GALL 626
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
VF + A+SG + ++RR+F+ MP +N +S+ MV LA G E+ LF+EM +
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
N ++ +++ ACS G V+ F++M N +T +V R+G L+
Sbjct: 71 R----NPVSWNTMMVACSQHGRVEDARGLFDAMP-----ARNEYSWTIMVSCYVRAGELT 121
Query: 606 EAEDFINSMPFEPDSNAWASLLSG 629
A + ++ MP E + + +++SG
Sbjct: 122 LARELLDRMPGEKCAACYNTMISG 145
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 212/724 (29%), Positives = 349/724 (48%), Gaps = 104/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L GR +H + K G E ++ L+ +YL R A+ + D+ D
Sbjct: 149 ILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD 208
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISG--------------- 127
V N +I+ + Q G+ + A +FD M + V+ +L++
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHS 268
Query: 128 --------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
++K G +EE++ F+ NV+ W + + Q +
Sbjct: 269 YLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAK 328
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ +F ++L +GV+PN+ T+ + + C + LG + L K GF+ + V
Sbjct: 329 SFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSG---- 384
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
V++D++ + G L +A+RI D + E++ VSW+ M
Sbjct: 385 ---------------------------VLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSM 417
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q + +EA F++M P+ + +SA A +KA+ G +HA V G
Sbjct: 418 IAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGY 477
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV I N L+ LY++C G +EA
Sbjct: 478 SADVSIWNGLVYLYARC----------------------------------GISKEAFSS 503
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ + + ++W+ +ISG+ + ++ VF +M +G N TF S + ASA++A +
Sbjct: 504 FEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADI 563
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +H ++IK G+ + + AL Y K G IE ++ F M +NE+SW ++
Sbjct: 564 KQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCC 623
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ G E+++LF++M++ + P+++T + VL ACSH GLV++GL YF SM + I P
Sbjct: 624 SQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPR 683
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CVVD+L R+G+L A+ F+ MP DS W +LLS CK +KN +I E A K+L
Sbjct: 684 PDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLL 743
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L A YVLLSN YA G+W +RK+M ++G+RK G SW+EV+N VH FF
Sbjct: 744 ELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGD 803
Query: 708 DHNP 711
+P
Sbjct: 804 RLHP 807
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 271/598 (45%), Gaps = 106/598 (17%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
+ A I+ L+G+ ++ N +I+ + G + A+R+F+ + R+ VSW A++S
Sbjct: 64 IHAKAIICGLSGYR-IIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLS------ 116
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
G+ QNG EA++L+ ++ SGV P SSI
Sbjct: 117 -------------------------GYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILS 151
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
AC + F+LG + ++K GF V N+LI+L L+ LA VF M D V+
Sbjct: 152 ACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVT 211
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
+ ++ + G A IFDEM Q++ S
Sbjct: 212 FNTLISGHAQCGHGDRALGIFDEM-----------------------------QLSGLS- 241
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
P++ + +L+A +++ LR G +H+++LK G+ D + +L+DLY K G+ ++
Sbjct: 242 -PDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQ 300
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+FDS D +VV WN M+ Y GQ+++ + FD
Sbjct: 301 IFDS---GDRTNVVLWNLMLVAY---GQIDDLAKSFD----------------------- 331
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+F ML +G PNK T+ +L + G+ +H IK GF D+++ L
Sbjct: 332 -----IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVL 386
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D Y+K G ++ ++R+ D + +K+ +SWT M+ G + + KE++ F+EM+ I P+
Sbjct: 387 IDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDN 446
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+ + S + AC+ V +G + ++ + + + +V + +R G EA
Sbjct: 447 IGLASAISACAGIKAVHQGSQ-IHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFE 505
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY---VLLSNIYASA 667
++ + + W L+SG + + E A+K K+ ++ A Y +S+I ASA
Sbjct: 506 AIEHK-EGITWNGLISG---FAQSGLYEEALKVFMKM-DQAGAKYNVFTFVSSISASA 558
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 219/525 (41%), Gaps = 73/525 (13%)
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC-AEINDFRLGLS 205
+ S+ + GF+ + L LF + V F+ +AC + L
Sbjct: 4 RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPE 63
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + + N LI L K G V AR VF+ + RD VSW +L
Sbjct: 64 IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVL-------- 115
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ Y Q+G EEA RL+R+M R P S +LSA
Sbjct: 116 -----------------------SGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSA 152
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ + G +H V K G + F+ NALI LY +C + VF ++ D
Sbjct: 153 CTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD---S 209
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V++N++I G+ G + A +F+EM LS
Sbjct: 210 VTFNTLISGHAQCGHGDRA-------------------------------LGIFDEMQLS 238
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G P+ T +S+L A ++V L KGK LH ++K G D + +L D Y KSGDIE +
Sbjct: 239 GLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEA 298
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
++FD N + W +M+ + +S ++F M + PN+ T +L C+H+
Sbjct: 299 LQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G + G + +S+ + + ++DM S+ G L +A+ ++ M E D +W S
Sbjct: 359 GEIGLG-EQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD-MIEEKDVVSWTS 416
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEH--PAGYVLLSNIYASAG 668
+++G Y + + A++ ++ P L S I A AG
Sbjct: 417 MIAG---YVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAG 458
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 202/495 (40%), Gaps = 140/495 (28%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+L+ T + G +H IK G + Y++ L+ MY
Sbjct: 350 CMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMY------------------- 390
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++G L++AQR+ D + E++ VSWT++I+G
Sbjct: 391 ------------SKYGWLDKAQRILDMIEEKDVVSWTSMIAG------------------ 420
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+VQ+ F EAL+ F ++ G+ P+ + +S ACA I G
Sbjct: 421 -------------YVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQ 467
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ ++ +G+ VS+ N L+ L + G A S F+ +E ++ ++W ++ F + G
Sbjct: 468 IHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGL 527
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EA ++F +M + A+YN F +SA
Sbjct: 528 YEEALKVFMKMDQAG--------AKYN-----------------------VFTFVSSISA 556
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+L ++ G +HA V+K G + ISNALI LY KCG +D ++ F + +++
Sbjct: 557 SANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRN---E 613
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN++I +G+ EA +LFD M ++
Sbjct: 614 VSWNTIITCCSQHGRGLEALDLFDQMKQQ------------------------------- 642
Query: 446 GEIPNKSTFSSVLCASASVASLEKG-------KDLHGKIIKLGFPYDVFLGTALTDTYAK 498
G P+ TF VL A + V +E+G + HG + P D + + D +
Sbjct: 643 GLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPR---P-DHY--ACVVDILGR 696
Query: 499 SGDIESSRRVFDRMP 513
+G ++ ++R + MP
Sbjct: 697 AGQLDRAKRFVEEMP 711
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 217/648 (33%), Positives = 334/648 (51%), Gaps = 75/648 (11%)
Query: 57 YLTTRLLIMYLGSRKSLEA----NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRL--- 109
YL +L Y + +S E + ++K G+D +V + + A + +L+ +++
Sbjct: 120 YLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQ 179
Query: 110 FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
+P + V T L+ + K G ++ S FE +NV+ WT+ I G+V+N E L
Sbjct: 180 IVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGL 239
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
LF ++ E+ V NE T+ ++ AC ++ G G + K+G E +S C L+T
Sbjct: 240 VLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIE--LSSC--LVT-- 293
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
+LD++++ GD+ ARR+F+E + V W+ MI
Sbjct: 294 -------------------------SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 328
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y +G EA LF++M+ KPN + VLS + L G +H +K+GI
Sbjct: 329 GYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIW- 387
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D ++NAL+ +Y+KC + +D + VF +ME K++
Sbjct: 388 DTNVANALVHMYAKCYQNRDAKYVF-------------------------EMESEKDI-- 420
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
V+W++IISG+ ++ +F+ M +PN T +S+ A AS+ SL
Sbjct: 421 -------VAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAI 473
Query: 470 GKDLHGKIIKLGF--PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
G LH +KLGF V +GTAL D YAK GD ES+R +FD + +KN I+W+ M+ G
Sbjct: 474 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGY 533
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ G K S+ LFEEM K PNE T SVL ACSH+G+V++G KYF+SM YN P+
Sbjct: 534 GKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPS 593
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
+HYTC+VDML+R+G L +A D I MP +PD + + L GC + + E +K +
Sbjct: 594 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 653
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
L + + YVL+SN+YAS GRW A VR LM ++GL K G S +E
Sbjct: 654 DLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIME 701
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 230/530 (43%), Gaps = 70/530 (13%)
Query: 102 NLEEAQRLFDGMPERNEVS-WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
+L +A + G ++S T L+S + G +++ F++ P + W + +
Sbjct: 71 SLRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYC 130
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
N SFE +K + L++ G +++ FS KAC E+ D G + I K +V
Sbjct: 131 LNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNV- 189
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V L+ + K GE+ + VF+ + R+VV WT
Sbjct: 190 VLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWT-------------------------- 223
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
MIA Y ++ EE LF +M S N + ++ A L+AL G H
Sbjct: 224 -----SMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHG 278
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
++K GIE + +L+D+Y KCG+ + R VF+ E +V W +MI GY NG
Sbjct: 279 CLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFN---EHSHVDLVMWTAMIVGYTHNGS 335
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ EA LF M SG G PN T +SVL
Sbjct: 336 VNEALSLFQKM------------SGV-------------------GIKPNCVTIASVLSG 364
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
V +LE G+ +HG IK+G +D + AL YAK ++ VF+ +K+ ++W
Sbjct: 365 CGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 423
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
++ G +++G E++ LF M S+ PN +T+ S+ AC+ G + G
Sbjct: 424 NSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVK 483
Query: 581 IYNIKPNGRHY-TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + + H T ++D ++ G A +++ E ++ W++++ G
Sbjct: 484 LGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIE-EKNTITWSAMIGG 532
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 195/424 (45%), Gaps = 54/424 (12%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ HG LIK+GI L T LL MY+ A + + + DLV+ MI
Sbjct: 272 QGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 331
Query: 99 QWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVE------------------- 135
G++ EA LF M + N V+ +++SG G +E
Sbjct: 332 HNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNV 391
Query: 136 ---------------ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
++ + FE +++++W + I GF QNG EAL LF ++ V
Sbjct: 392 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESV 451
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF--EKHVSVCNSLITLSLKMGEVDLA 238
PN VT +S+ ACA + +G S+ K GF V V +L+ K G+ + A
Sbjct: 452 MPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESA 511
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQS 294
R +FD +E+++ ++W+ ++ + + GD + +F+EM ++ NE +++ +++ + +
Sbjct: 512 RLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHT 571
Query: 295 GYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G E + F M + Y+F P+T ++ ++ LA L + + + K+ I+ DV
Sbjct: 572 GMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI---IEKMPIQPDVRC 628
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVE---KDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
A + G +V +++ D ++ V +++ Y +G+ +AKE+ +
Sbjct: 629 FGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNL---YASDGRWSQAKEVRNL 685
Query: 411 MPKR 414
M +R
Sbjct: 686 MKQR 689
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 331/654 (50%), Gaps = 84/654 (12%)
Query: 83 NGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NGF+ + + N ++ + G+LEEA +FD + +R
Sbjct: 184 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG----------------------- 220
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKP-NE----VTFSSICKAC 194
+VISW + + V++ ++ AL LF K+ L KP NE ++ +I AC
Sbjct: 221 -----IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC 275
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ V G + G V V N+LI K G ++ A VF+ ME +DVVSW
Sbjct: 276 GSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 335
Query: 255 VILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
++ + + G+ A +F M + N V+W+ +IA Y+Q G EA LFRQM
Sbjct: 336 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 395
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI----------GIEKDVFISNALIDL 360
PN VLSA ASL A G +HA+ LK G ++D+ + NALID+
Sbjct: 396 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 455
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKC K R +FD I ++ +VV+W MIGG+ G +A +LF M
Sbjct: 456 YSKCRSFKAARSIFDDIPLEE-RNVVTWTVMIGGHAQYGDSNDALKLFVEM--------- 505
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
I Y G PN T S +L A A +A++ GK +H +++
Sbjct: 506 -ISEPY-------------------GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR- 544
Query: 481 GFPYD---VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
Y+ F+ L D Y+K GD++++R VFD M K+ ISWT M+ G G E++
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
++F++M K P+++T L VL+ACSH G+VD+GL YF+SM Y + P HY C +D+
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+RSGRL +A + MP EP + W +LLS C+ + N ++AE A+ L ++ E+ Y
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 724
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
L+SNIYA+AGRW D +R LM + G++K GCSWV+ + FF +P
Sbjct: 725 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 778
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/536 (28%), Positives = 262/536 (48%), Gaps = 63/536 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T +++ ++ G + ++ ER + W I ++ G A+ + ++L +G +
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T + KAC E+ +R G + GLI GFE +V +CN+L+ + + G ++ A +
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 242 FDRMEKR---DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
FD + +R DV+SW I+ ++ + A +F +M +I +
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM---------TLIVHEKPTNERS 263
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+ + +L A SLKA+ VH + ++ G DVF+ NALI
Sbjct: 264 DIISIVN----------------ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALI 307
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN--- 415
D Y+KCG ++ VF+ + KD VVSWN+M+ GY +G E A ELF NM K N
Sbjct: 308 DAYAKCGLMENAVKVFNMMEFKD---VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 364
Query: 416 -DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
V+W+A+I+GY + +F +M+ SG +PN T SVL A AS+ + +G ++H
Sbjct: 365 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 424
Query: 475 GKIIK----------LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKNEISWTV 522
+K G D+ + AL D Y+K +++R +FD +P ++N ++WTV
Sbjct: 425 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 484
Query: 523 MVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKG-------LK 573
M+ G A+ G + +++ LF EM E + PN TI +L AC+H + G L+
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ Y + C++DM S+ G + A +SM + + +W S+++G
Sbjct: 545 HHRYESSAYFVA------NCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTG 593
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 240/558 (43%), Gaps = 119/558 (21%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L S V Q + +HG+ I+ G D
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFP-------------------------------D 299
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ V N +I+A + G +E A ++F+ M ++ VSW A+++G+ + G E + F+
Sbjct: 300 VFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRK 359
Query: 147 QN----VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+N V++WTA I G+ Q G S EAL LF +++ SG PN VT S+ ACA + F
Sbjct: 360 ENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 419
Query: 203 GLSVFGLIFK----------AGFEKHVSVCNSLITLSLKMGEVDLARSVFD--RMEKRDV 250
G + K G ++ + V N+LI + K ARS+FD +E+R+V
Sbjct: 420 GTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNV 479
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
V+WTV++ + GD +A ++F EM Y
Sbjct: 480 VTWTVMIGGHAQYGDSNDALKLFVEMISE-----------------------------PY 510
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD--VFISNALIDLYSKCGETK 368
PN S +L A A L A+R G +HA+VL+ + F++N LID+YSKCG+
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 570
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
R VFDS+ +K +SW SM+ GYG++G+ EA ++FD M K
Sbjct: 571 TARHVFDSMSQKS---AISWTSMMTGYGMHGRGSEALDIFDKMRK--------------- 612
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVF 487
+G +P+ TF VL A + +++G + G
Sbjct: 613 ----------------AGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAE 656
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV---RGLAESGYAKESINLFEEM 543
D A+SG ++ + R MP + + W ++ R + A+ ++N EM
Sbjct: 657 HYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 716
Query: 544 EKTSITPNELTILSVLFA 561
+ T++S ++A
Sbjct: 717 NAEN--DGSYTLISNIYA 732
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 17/176 (9%)
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
LGT + +Y G + + V +R+ + W +++R + G +IN+ M +
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 548 ITPNELTILSVLFACS-----HSGLVDKGLKYFNSMEPIYNIKPNGRHYTC--VVDMLSR 600
P+ T+ VL AC G GL N E N+ + C +V M SR
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFES--NV------FICNALVAMYSR 202
Query: 601 SGRLSEAEDFINSMPFE--PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
G L EA + + D +W S++S N A + + E P
Sbjct: 203 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 258
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/544 (34%), Positives = 309/544 (56%), Gaps = 35/544 (6%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L+ ++LL KP T+ ++ + C++ G V I +GF + + N ++ +
Sbjct: 72 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGM 131
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K G + AR VFD M +RDV SW V+++ + E+G L EAR +FDEMPER+ SW+ M+
Sbjct: 132 YAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMV 191
Query: 289 ARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
Y + PEEA L+ M R + KPN S ++A A++K +R G +H H+++ G+
Sbjct: 192 TGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGL 251
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ D V W+S++ YG G ++EA+ +
Sbjct: 252 DSDE----------------------------------VLWSSLMDMYGKCGCIDEARNI 277
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD + ++ VSW+++I Y + ++ F++F+E++ S E PN+ TFS VL A A + +
Sbjct: 278 FDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTE 337
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E G+ +HG + ++GF F ++L D Y K G+IES+R V D P + +S T ++ G
Sbjct: 338 ELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGY 397
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++G E++ F+ + K+ P+ +T ++VL AC+H+GLV+KGL++F S+ +++
Sbjct: 398 AQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHT 457
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HYTC+VD+L+RSGR + + ++ MP +P WAS+L GC TY N +AE A + L+
Sbjct: 458 SDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 517
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
K+ E+P YV ++NIYA+AG+W + +RK M E G+ K G SW E++ + H F
Sbjct: 518 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAAD 577
Query: 708 DHNP 711
+P
Sbjct: 578 TSHP 581
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 253/543 (46%), Gaps = 84/543 (15%)
Query: 63 LIMYLGSRKSLEANEIVKD---LNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
LI ++LE + V + +GF +V+ N ++ + G+L +A+++FD MPER+
Sbjct: 93 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEMPERD 152
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF-LKLL 176
SW +++G+ + G +EE+ F+ P ++ SWTA + G+V+ EAL L+ L
Sbjct: 153 VCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQR 212
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
KPN T SS A A I R G + G I +AG +
Sbjct: 213 VPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDS------------------- 253
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
D V W+ ++D++ + G + EAR IFD++ +++ VSW+ MI RY +S
Sbjct: 254 ------------DEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSR 301
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E F LF ++ +PN FS VL+A A L G VH ++ ++G + F S++
Sbjct: 302 WREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSS 361
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LID+Y+KCG + R V D + D +VS S+IGGY NG+ +EA
Sbjct: 362 LIDMYTKCGNIESARHVVDGCPKPD---LVSLTSLIGGYAQNGKPDEAL----------- 407
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
K FDL +L SG P+ TF +VL A +EKG +
Sbjct: 408 -------------KYFDL-------LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 447
Query: 477 IIK---LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRGLAESGY 532
I + L D + T L D A+SG E + V MP K ++ W ++ G + G
Sbjct: 448 ITEKHDLTHTSDHY--TCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYG- 504
Query: 533 AKESINLFEE--MEKTSITP-NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
+I+L EE E I P N +T +++ + +G ++ K M+ I K G
Sbjct: 505 ---NIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGS 561
Query: 590 HYT 592
+T
Sbjct: 562 SWT 564
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 187/462 (40%), Positives = 281/462 (60%), Gaps = 7/462 (1%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFK 313
+LDV+ + G + +A ++FDEMP R+ VSW+ ++ +N++ P + M T +
Sbjct: 43 TLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQ 102
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F+ ++ A +SL LR G VHA + D + ++LID+Y+KCG+ + R V
Sbjct: 103 PDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAV 162
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FDSI+ K+ VSW SMI GY +G+ EA +LF P RN SW+A+ISG ++
Sbjct: 163 FDSILFKNS---VSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGI 219
Query: 434 LVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
F++FNEM G +I + SSV+ A++A LE GK +HG +I LGF +F+ AL
Sbjct: 220 YSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNAL 279
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK DI +++ +F RMP K+ ISWT ++ G A+ G A+E++ L++EM + I PNE
Sbjct: 280 VDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNE 339
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+T + +L+ACSH+GLV +G + F SM Y+I P+ +HYTC++D+LSRSG L EAE+ ++
Sbjct: 340 VTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLD 399
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
+PF+PD WASLLS C + N ++ R + L E P+ Y+LLSN+YA A W
Sbjct: 400 KIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGS 459
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEV--RNQVHFFFQKTDHNPK 712
VRKLM+ +RK G S ++ +QV + DH K
Sbjct: 460 VSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMK 501
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 236/512 (46%), Gaps = 75/512 (14%)
Query: 76 NEIVKDLNGFDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
++I+K GFD ++ N +++ + G + +A +LFD MP R+ VSW ++++ K
Sbjct: 27 SQIIK--AGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALI 84
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
++ + F+ + G++P+ F+ I +A
Sbjct: 85 PRRTL-------------------SMLNTMFTHD-----------GLQPDHFVFACIVRA 114
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C+ + RLG V + F V +SLI + K G+ D AR+VFD + ++ VSW
Sbjct: 115 CSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSW 174
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T ++ + G EA +F + P RN SW+ +I+ QSG+ +F LF +M R
Sbjct: 175 TSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGID 234
Query: 314 -PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+ S V+ A+L L G +H V+ +G E +FISNAL+D+Y+KC + +
Sbjct: 235 IVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKD 294
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+F + KD V+SW S+I G +G+ EEA L+D
Sbjct: 295 IFYRMPRKD---VISWTSIIVGTAQHGKAEEALTLYD----------------------- 328
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--T 490
EM+LS PN+ TF +L A + + +G++L + + + + L T
Sbjct: 329 --------EMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF-RSMTTDYSINPSLQHYT 379
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRGLAESGYAKESINLFEE-MEKTSI 548
L D ++SG ++ + + D++P K +E +W ++ + + + + ++
Sbjct: 380 CLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPE 439
Query: 549 TPNELTILSVLFACSHS-GLVDKGLKYFNSME 579
P+ +LS ++A + G V K K +SME
Sbjct: 440 DPSTYILLSNVYAGAEMWGSVSKVRKLMSSME 471
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 180/351 (51%), Gaps = 16/351 (4%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D VV + +I+ + G +EA+ +FD + +N VSWT++ISG+ + GR E+M F + P
Sbjct: 139 DEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAP 198
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGL 204
+N+ SWTA I G +Q+G + LF ++ G+ + + SS+ CA + LG
Sbjct: 199 VRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGK 258
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ GL+ GFE + + N+L+ + K ++ A+ +F RM ++DV+SWT I+ + G
Sbjct: 259 QIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHG 318
Query: 265 DLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA ++DEM + NEV++ ++ + +G LFR MT YS P+ +
Sbjct: 319 KAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHY 378
Query: 320 SIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ +L L+ RSG A L KI + D +L+ + + G + D +
Sbjct: 379 TCLLDLLS-----RSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRV 433
Query: 378 VE---KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
++ +D + + +++ G + G + + ++L +M R + +S+I G
Sbjct: 434 LDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFG 484
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 142/348 (40%), Gaps = 69/348 (19%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N S F L A ++ + +H+ ++K G +K +SN L+D+Y KCG +F
Sbjct: 2 NISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLF 61
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D MP R+ VSW++I++ + +
Sbjct: 62 D----------------------------------EMPNRDHVSWASILTAHNKALIPRR 87
Query: 435 VFAVFNEMLL-SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
++ N M G P+ F+ ++ A +S+ L GK +H + + F D + ++L
Sbjct: 88 TLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLI 147
Query: 494 DTYAKSGDIESSRRVFD-------------------------------RMPDKNEISWTV 522
D Y K G + +R VFD + P +N SWT
Sbjct: 148 DMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTA 207
Query: 523 MVRGLAESGYAKESINLFEEMEKTSI-TPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ GL +SG+ S +LF EM + I + L + SV+ C++ L++ G K + +
Sbjct: 208 LISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELG-KQIHGLVIA 266
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ +VDM ++ + A+D MP D +W S++ G
Sbjct: 267 LGFESCLFISNALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSIIVG 313
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 313/557 (56%), Gaps = 35/557 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSV 206
NV SW AAI G+V++G L+ ++L G +KP+ T+ + K C LGL V
Sbjct: 121 NVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGV 180
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + K GFE + V N+ IT+ L GE+ +A VF++ RD+
Sbjct: 181 LGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDL---------------- 224
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
V+W+ MI + G EA +++++M +PN ++S+
Sbjct: 225 ---------------VTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSC 269
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ ++ L G H ++ + G+E + ++NAL+D+Y KCGE R++FD++ +K + V
Sbjct: 270 SQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTL---V 326
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SW +M+ GY G ++ A+E+ +P+++ V W+AIISG ++ KQ A+F+EM +
Sbjct: 327 SWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRT 386
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P+K T + L A + + +L+ G +H I + DV LGTAL D YAK G+I +
Sbjct: 387 IEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARAL 446
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VF+ +P +N ++WT ++ GLA G A+++++ F +M I P+E+T L VL AC H G
Sbjct: 447 QVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGG 506
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LV++G KYF+ M +N+ P +HY+C+VD+L R+G L EAE+ + +MP D+ +L
Sbjct: 507 LVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGAL 566
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
C+ Y N QI ER L ++ + YVLL+++Y+ A W +A + RKLM +KG+
Sbjct: 567 FFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVE 626
Query: 687 KSGGCSWVEVRNQVHFF 703
K+ GCS VE+ VH F
Sbjct: 627 KTPGCSLVEINGIVHEF 643
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 194/392 (49%), Gaps = 35/392 (8%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A I+ + G + + F ++ +++++W + I G V+ G + EA+K++ ++ V+P
Sbjct: 198 ASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRP 257
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NE+T + +C+++ D LG I + G E + + N+L+ + +K GE+ AR +F
Sbjct: 258 NEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLF 317
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D M ++ +VSWT ++ + G L AR I ++PE++ V W+ +I+ Q+ +EA
Sbjct: 318 DNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALA 377
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF +M + +P+ LSA + L AL G+ +H ++ + + DV + AL+D+Y+
Sbjct: 378 LFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYA 437
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG VF+ I +++ ++W ++I G L+G ++A
Sbjct: 438 KCGNIARALQVFEEIPQRN---CLTWTAVICGLALHGNAQDA------------------ 476
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLG 481
+ F++M+ G +P++ TF VL A +E+G+ ++ K
Sbjct: 477 -------------LSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFN 523
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ + + D ++G +E + + MP
Sbjct: 524 VSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 177/410 (43%), Gaps = 68/410 (16%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFS 320
E +L RI + E N SW+ I Y +SG E F L+++M + KP+ +
Sbjct: 103 ESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYP 162
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++L + G+ V HVLK G E D+F+ NA I + CGE + +D +
Sbjct: 163 LLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELS---VAYDVFNKS 219
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
V +V+WNSMI G G EA ++
Sbjct: 220 RVRDLVTWNSMITGCVKRGLAIEA-------------------------------IKIYK 248
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM PN+ T ++ + + V L GK+ H I + G + + L AL D Y K G
Sbjct: 249 EMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCG 308
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGY---------------------------- 532
++ ++R +FD M K +SWT MV G A G+
Sbjct: 309 ELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQ 368
Query: 533 ---AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
KE++ LF EM+ +I P+++T+++ L ACS G +D G+ + +E + + +
Sbjct: 369 AKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVA 427
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
T +VDM ++ G ++ A +P + + W +++ G + N Q A
Sbjct: 428 LGTALVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQDA 476
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 126/248 (50%), Gaps = 5/248 (2%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + + N +++ ++ G L A+ LFD M ++ VSWT ++ G+ + G ++ + +
Sbjct: 292 FTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKI 351
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++V+ W A I G VQ EAL LF ++ ++P++VT + AC+++ +G+
Sbjct: 352 PEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGI 411
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I + V++ +L+ + K G + A VF+ + +R+ ++WT ++ G
Sbjct: 412 WIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHG 471
Query: 265 DLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCF 319
+ +A F +M +E+++ +++ G EE + F +M ++++ P +
Sbjct: 472 NAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHY 531
Query: 320 SIVLSALA 327
S ++ L
Sbjct: 532 SCMVDLLG 539
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 140/296 (47%), Gaps = 22/296 (7%)
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+++ + + + N SW+A I GY+E + F ++ MLL G + P+ T+ +L
Sbjct: 106 ELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLL 165
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
S G + G ++K GF D+F+ A G++ + VF++ ++ +
Sbjct: 166 KGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLV 225
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
+W M+ G + G A E+I +++EME + PNE+T++ ++ +CS ++ G K F+
Sbjct: 226 TWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLG-KEFHCY 284
Query: 579 EPIYNIKPNGRHYT-----CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
IK +G +T ++DM + G L A ++M + +W +++ G Y
Sbjct: 285 -----IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMA-QKTLVSWTTMVLG---Y 335
Query: 634 KNEQIAERAVKNLWKLAEEH--PAGYVLLSNIYASAGRWIDA----MNVRKLMTEK 683
+ A + L+K+ E+ P ++ + A G+ A M +R + +K
Sbjct: 336 ARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDK 391
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 175/438 (39%), Gaps = 86/438 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK Q G + GH++K G + ++ + M L + A ++ D
Sbjct: 164 LLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRD 223
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISG--------------- 127
LV N MI ++ G EA +++ M NE++ +IS
Sbjct: 224 LVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHC 283
Query: 128 --------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
++K G + + F+ + ++SWT + G+ + GF
Sbjct: 284 YIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDV 343
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK-HVSVCNSLI 226
A ++ K+ E V P +++I C + + L++F + E V++ N L
Sbjct: 344 AREILYKIPEKSVVP----WNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLS 399
Query: 227 TLSLKMGEVDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
S ++G +D+ + +E+ DV T ++D++ + G++ A ++F+E+P+RN +
Sbjct: 400 ACS-QLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCL 458
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+W+ +I G ++A F +M P+ F VLSA H
Sbjct: 459 TWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACC-----------HG-- 505
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK-DVA-HVVSWNSMIGGYGLNGQ 400
G ++GR F + K +V+ + ++ M+ G G
Sbjct: 506 ----------------------GLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGH 543
Query: 401 MEEAKELFDNMPKRNDVS 418
+EEA+EL NMP D +
Sbjct: 544 LEEAEELVKNMPMAADAA 561
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 214/686 (31%), Positives = 367/686 (53%), Gaps = 65/686 (9%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHK------ERYLTTRLLIMYLGSRKSL-----EANE 77
+++ S N +I G LH ++++ HK ER + L++ +RK + E E
Sbjct: 77 RNLVSWNTMIAGY-LHNNMVEEA-HKLFDLMAERDNFSWALMITCYTRKGMLEKARELFE 134
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+V D D N MI + G ++A+++F+ MP ++ VS+ ++++G+ ++G++ +
Sbjct: 135 LVPD--KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLA 192
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
M +FER +NV+SW + GFV N A +LF K+ + PN V++ ++
Sbjct: 193 MKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPD----PNAVSWVTML------ 242
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
GF +H G++ AR +FDRM ++VVSW ++
Sbjct: 243 ---------------CGFARH--------------GKIVEARKLFDRMPCKNVVSWNAMI 273
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+++ + EA ++F E P ++ VSW+ MI Y + G +EA ++ QM T+
Sbjct: 274 AAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTA 333
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
++S L + V + + K +D N++I Y + G + +F +
Sbjct: 334 ----LMSGLIQNGRIDEASQVFSQLNK----RDAICWNSMIAGYCQSGRMSEALNLFRQM 385
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
V + VSWN+MI GY G+M+ A E+F+ M RN +SW+++I+G+L++ +
Sbjct: 386 ---PVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALK 442
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
M G+ P++STF+ L + A++A+L+ GK LH I+K G+ D+F+ AL YA
Sbjct: 443 SLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYA 502
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G ++S+ +VF + + ISW ++ G A +GYA E+ FE+M P+E+T +
Sbjct: 503 KCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIG 562
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
+L ACSH+GL ++G+ F M + I+P HY+C+VD+L R GRL EA + + M +
Sbjct: 563 MLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVK 622
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
++ W SLL+ C+ +KN ++ + A L +L + + Y+ LSN++A AGRW D +R
Sbjct: 623 ANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLR 682
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFF 703
LM E+ K GCSW+EV+NQ+ F
Sbjct: 683 VLMRERRAGKLPGCSWIEVQNQIQNF 708
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 225/484 (46%), Gaps = 80/484 (16%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+F K+ + NS++T+ K G V AR +FD+M +R++VSW ++ ++ + EA
Sbjct: 39 VFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEA 98
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
++FD M ER+ SW++MI Y + G E+A LF + K +T+C+
Sbjct: 99 HKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPD---KLDTACW---------- 145
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
NA+I Y+K G D VF+ + KD +VS+N
Sbjct: 146 -------------------------NAMIAGYAKKGRFDDAEKVFEKMPVKD---LVSYN 177
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SM+ GY NG+M A + F+ M +RN VSW+ +++G++ + + +F ++ P
Sbjct: 178 SMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKI----PDP 233
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD------VFLGTALTDTYAKSGDIE 503
N ++ ++LC A HGKI++ +D V A+ Y + I+
Sbjct: 234 NAVSWVTMLCGFAR----------HGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQID 283
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ ++F P K+ +SWT M+ G G E+ ++ +M + + ++S L
Sbjct: 284 EAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAA-KTALMSGLI--- 339
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS---RSGRLSEAEDFINSMPFEPDS 620
+G +D+ + F+ + N R C M++ +SGR+SEA + MP + ++
Sbjct: 340 QNGRIDEASQVFSQL--------NKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVK-NA 390
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
+W +++SG Y +RA + + + + L + G ++DA+ LM
Sbjct: 391 VSWNTMISG---YAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLM 447
Query: 681 TEKG 684
++G
Sbjct: 448 GQEG 451
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 107/288 (37%), Gaps = 71/288 (24%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C L + + G+ LH ++K+G + +++ L+ MY A ++ KD+
Sbjct: 458 TFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDI 517
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
G DL +SW +LISG+ +G E+ W FE
Sbjct: 518 EGVDL-------------------------------ISWNSLISGYALNGYANEAFWAFE 546
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
++ G P+EVTF + AC+
Sbjct: 547 -------------------------------QMSSEGTVPDEVTFIGMLSACSHAGLTNQ 575
Query: 203 GLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF 260
G+ +F + + E + L+ L +MG ++ A ++ M+ K + W +L
Sbjct: 576 GVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAAC 635
Query: 261 -----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+E+G + R + E+ N ++ + + ++G E+ RL
Sbjct: 636 RVHKNMELGKIAALRLL--ELEPHNASNYITLSNMHAEAGRWEDVERL 681
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 331/654 (50%), Gaps = 84/654 (12%)
Query: 83 NGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NGF+ + + N ++ + G+LEEA +FD + +R
Sbjct: 191 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG----------------------- 227
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKP-NE----VTFSSICKAC 194
+VISW + + V++ ++ AL LF K+ L KP NE ++ +I AC
Sbjct: 228 -----IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC 282
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ V G + G V V N+LI K G ++ A VF+ ME +DVVSW
Sbjct: 283 GSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 342
Query: 255 VILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
++ + + G+ A +F M + N V+W+ +IA Y+Q G EA LFRQM
Sbjct: 343 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 402
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI----------GIEKDVFISNALIDL 360
PN VLSA ASL A G +HA+ LK G ++D+ + NALID+
Sbjct: 403 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 462
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKC K R +FD I ++ +VV+W MIGG+ G +A +LF M
Sbjct: 463 YSKCRSFKAARSIFDDIPLEE-RNVVTWTVMIGGHAQYGDSNDALKLFVEM--------- 512
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
I Y G PN T S +L A A +A++ GK +H +++
Sbjct: 513 -ISEPY-------------------GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR- 551
Query: 481 GFPYD---VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
Y+ F+ L D Y+K GD++++R VFD M K+ ISWT M+ G G E++
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
++F++M K P+++T L VL+ACSH G+VD+GL YF+SM Y + P HY C +D+
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+RSGRL +A + MP EP + W +LLS C+ + N ++AE A+ L ++ E+ Y
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 731
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
L+SNIYA+AGRW D +R LM + G++K GCSWV+ + FF +P
Sbjct: 732 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 785
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/536 (28%), Positives = 262/536 (48%), Gaps = 63/536 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T +++ ++ G + ++ ER + W I ++ G A+ + ++L +G +
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T + KAC E+ +R G + GLI GFE +V +CN+L+ + + G ++ A +
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 242 FDRMEKR---DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
FD + +R DV+SW I+ ++ + A +F +M +I +
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM---------TLIVHEKPTNERS 270
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+ + +L A SLKA+ VH + ++ G DVF+ NALI
Sbjct: 271 DIISIVN----------------ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALI 314
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN--- 415
D Y+KCG ++ VF+ + KD VVSWN+M+ GY +G E A ELF NM K N
Sbjct: 315 DAYAKCGLMENAVKVFNMMEFKD---VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 371
Query: 416 -DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
V+W+A+I+GY + +F +M+ SG +PN T SVL A AS+ + +G ++H
Sbjct: 372 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 431
Query: 475 GKIIK----------LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKNEISWTV 522
+K G D+ + AL D Y+K +++R +FD +P ++N ++WTV
Sbjct: 432 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 491
Query: 523 MVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKG-------LK 573
M+ G A+ G + +++ LF EM E + PN TI +L AC+H + G L+
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ Y + C++DM S+ G + A +SM + + +W S+++G
Sbjct: 552 HHRYESSAYFVA------NCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTG 600
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 240/558 (43%), Gaps = 119/558 (21%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L S V Q + +HG+ I+ G D
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFP-------------------------------D 306
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ V N +I+A + G +E A ++F+ M ++ VSW A+++G+ + G E + F+
Sbjct: 307 VFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRK 366
Query: 147 QN----VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+N V++WTA I G+ Q G S EAL LF +++ SG PN VT S+ ACA + F
Sbjct: 367 ENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 426
Query: 203 GLSVFGLIFK----------AGFEKHVSVCNSLITLSLKMGEVDLARSVFD--RMEKRDV 250
G + K G ++ + V N+LI + K ARS+FD +E+R+V
Sbjct: 427 GTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNV 486
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
V+WTV++ + GD +A ++F EM Y
Sbjct: 487 VTWTVMIGGHAQYGDSNDALKLFVEMISE-----------------------------PY 517
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD--VFISNALIDLYSKCGETK 368
PN S +L A A L A+R G +HA+VL+ + F++N LID+YSKCG+
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 577
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
R VFDS+ +K +SW SM+ GYG++G+ EA ++FD M K
Sbjct: 578 TARHVFDSMSQKS---AISWTSMMTGYGMHGRGSEALDIFDKMRK--------------- 619
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVF 487
+G +P+ TF VL A + +++G + G
Sbjct: 620 ----------------AGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAE 663
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV---RGLAESGYAKESINLFEEM 543
D A+SG ++ + R MP + + W ++ R + A+ ++N EM
Sbjct: 664 HYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 723
Query: 544 EKTSITPNELTILSVLFA 561
+ T++S ++A
Sbjct: 724 NAEN--DGSYTLISNIYA 739
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 17/176 (9%)
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
LGT + +Y G + + V +R+ + W +++R + G +IN+ M +
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 548 ITPNELTILSVLFACS-----HSGLVDKGLKYFNSMEPIYNIKPNGRHYTC--VVDMLSR 600
P+ T+ VL AC G GL N E N+ + C +V M SR
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFES--NV------FICNALVAMYSR 209
Query: 601 SGRLSEAEDFINSMPFE--PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
G L EA + + D +W S++S N A + + E P
Sbjct: 210 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 265
>gi|125602089|gb|EAZ41414.1| hypothetical protein OsJ_25936 [Oryza sativa Japonica Group]
Length = 1165
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 323/607 (53%), Gaps = 36/607 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + + G L +AQ LFD MP R+ +SWTAL++ + G + + F+ P +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + +++ A LF K+ N V++ +I A+ V+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAK----NAVSYGAIISGLAKAEMLHEAELVYE-- 155
Query: 211 FKAGFEKHVSV-CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ ++ V N+L+ L++GE+ +A VF+ M RDV+SW+ ++D + G + EA
Sbjct: 156 -EMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEA 214
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
RR+FD MPERN VSW+ MI Y + G + LF M R + NT+ S+ L A A+
Sbjct: 215 RRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAA 274
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV------- 382
R G+ +H ++ +G E D+F+ +++I +YS+ G D + FD + +KD+
Sbjct: 275 SLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLI 334
Query: 383 -----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
AHV VSW SM+ G+ G M E+ ELF+ MP +++V+W+A
Sbjct: 335 TGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTA 394
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IIS ++ + + F M G PN FS +L A AS+A L +G+ H I +G
Sbjct: 395 IISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMG 454
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ +D + T+L YAK G + + VF + + + I+ M+ + G+ ++++ LF
Sbjct: 455 WVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFT 514
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M+ PN +T L +L C+ +G V +G YF SM P+Y ++PN HYTC+VD+L R+
Sbjct: 515 KMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRA 574
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L+EA + INSMP S+AWA+LLS + N A+ A + L + Y +LS
Sbjct: 575 GLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLS 634
Query: 662 NIYASAG 668
+++SAG
Sbjct: 635 RMFSSAG 641
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 243/519 (46%), Gaps = 70/519 (13%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N ++ ++ G L A R+F+GM R+ +SW+A++ G KHG V E+ F+ P
Sbjct: 163 DPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMP 222
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SWT+ I G+V+ G + L LFL + GV+ N T S ACA + R G+
Sbjct: 223 ERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQ 282
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE--- 262
+ LI GFE + + +S+I + + G + A+ FD M+++D+VSW ++ +++
Sbjct: 283 IHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDM 342
Query: 263 ----------------------------MGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
G + E+ +F++MP ++EV+W+ +I+ + +
Sbjct: 343 VEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITN 402
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G A R F +M++ KPNT FS +LSALASL L G HA+ + +G D +
Sbjct: 403 GDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH 462
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+ +Y+KCG + VF SI +++ NSMI + +G +E+A +LF M
Sbjct: 463 TSLVSMYAKCGRLAEAYHVFSSISNPS---LIAINSMITAFVQHGFVEDALKLFTKMQN- 518
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+G PN TF +L A +++G +
Sbjct: 519 ------------------------------AGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 475 GKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLA-ESG 531
+ + G + T + D ++G + + + + MP + +W ++ + S
Sbjct: 549 ESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSN 608
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
A I + +EK T+LS +F S +G+ D+
Sbjct: 609 LAFAKIAAQKLLEKDPYDATAYTVLSRMF--SSAGMEDE 645
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 174/379 (45%), Gaps = 34/379 (8%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L + +L +G +H +I G + +L ++IMY ++A + D+
Sbjct: 268 LDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDI 327
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V N +I +Q +EEA LF M +++ VSWT+++ GF G + ES+ FE+ P +
Sbjct: 328 VSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVK 387
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+ ++WTA I F+ NG A++ F ++ + G KPN + FS + A A +
Sbjct: 388 DEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLA--------- 438
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+ G + H S+ MG VFD +VS ++ + G L
Sbjct: 439 --MLNQGRQAH--------AYSINMGW------VFDSAVHTSLVS------MYAKCGRLA 476
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
EA +F + + ++ + MI + Q G+ E+A +LF +M +KPN F +L+ A
Sbjct: 477 EAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCA 536
Query: 328 SLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++ G + + + G+E + ++DL + G + + +S+ + D H
Sbjct: 537 RAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQND--HSD 594
Query: 387 SWNSMIGGYGLNGQMEEAK 405
+W +++ L+ + AK
Sbjct: 595 AWAALLSASSLHSNLAFAK 613
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
CLL + S ++ QGR H + I G + + T L+ MY + EA + ++
Sbjct: 429 CLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNP 488
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYF 141
L+ N MI A +Q G +E+A +LF M + N V++ +++G + G V++ YF
Sbjct: 489 SLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 142 E 142
E
Sbjct: 549 E 549
>gi|125560040|gb|EAZ05488.1| hypothetical protein OsI_27705 [Oryza sativa Indica Group]
Length = 1165
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 323/607 (53%), Gaps = 36/607 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + + G L +AQ LFD MP R+ +SWTAL++ + G + + F+ P +N
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + +++ A LF K+ N V++ +I A+ V+
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPAK----NAVSYGAIISGLAKAEMLHEAELVYE-- 155
Query: 211 FKAGFEKHVSV-CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ ++ V N+L+ L++GE+ +A VF+ M RDV+SW+ ++D + G + EA
Sbjct: 156 -EMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEA 214
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
RR+FD MPERN VSW+ MI Y + G + LF M R + NT+ S+ L A A+
Sbjct: 215 RRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAA 274
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV------- 382
R G+ +H ++ +G E D+F+ +++I +YS+ G D + FD + +KD+
Sbjct: 275 SLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWNSLI 334
Query: 383 -----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
AHV VSW SM+ G+ G M E+ ELF+ MP +++V+W+A
Sbjct: 335 TGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTA 394
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IIS ++ + + F M G PN FS +L A AS+A L +G+ H I +G
Sbjct: 395 IISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMG 454
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ +D + T+L YAK G + + VF + + + I+ M+ + G+ ++++ LF
Sbjct: 455 WVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFT 514
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M+ PN +T L +L C+ +G V +G YF SM P+Y ++PN HYTC+VD+L R+
Sbjct: 515 KMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRA 574
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L+EA + INSMP S+AWA+LLS + N A+ A + L + Y +LS
Sbjct: 575 GLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLS 634
Query: 662 NIYASAG 668
+++SAG
Sbjct: 635 RMFSSAG 641
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 243/519 (46%), Gaps = 70/519 (13%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N ++ ++ G L A R+F+GM R+ +SW+A++ G KHG V E+ F+ P
Sbjct: 163 DPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMP 222
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SWT+ I G+V+ G + L LFL + GV+ N T S ACA + R G+
Sbjct: 223 ERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQ 282
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE--- 262
+ LI GFE + + +S+I + + G + A+ FD M+++D+VSW ++ +++
Sbjct: 283 IHNLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDM 342
Query: 263 ----------------------------MGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
G + E+ +F++MP ++EV+W+ +I+ + +
Sbjct: 343 VEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITN 402
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G A R F +M++ KPNT FS +LSALASL L G HA+ + +G D +
Sbjct: 403 GDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVH 462
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+ +Y+KCG + VF SI +++ NSMI + +G +E+A +LF M
Sbjct: 463 TSLVSMYAKCGRLAEAYHVFSSISNPS---LIAINSMITAFVQHGFVEDALKLFTKMQN- 518
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+G PN TF +L A +++G +
Sbjct: 519 ------------------------------AGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 475 GKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLA-ESG 531
+ + G + T + D ++G + + + + MP + +W ++ + S
Sbjct: 549 ESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSN 608
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
A I + +EK T+LS +F S +G+ D+
Sbjct: 609 LAFAKIAAQKLLEKDPYDATAYTVLSRMF--SSAGMEDE 645
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 174/379 (45%), Gaps = 34/379 (8%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L + +L +G +H +I G + +L ++IMY ++A + D+
Sbjct: 268 LDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDI 327
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V N +I +Q +EEA LF M +++ VSWT+++ GF G + ES+ FE+ P +
Sbjct: 328 VSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVK 387
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+ ++WTA I F+ NG A++ F ++ + G KPN + FS + A A +
Sbjct: 388 DEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLA--------- 438
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+ G + H S+ MG VFD +VS ++ + G L
Sbjct: 439 --MLNQGRQAH--------AYSINMGW------VFDSAVHTSLVS------MYAKCGRLA 476
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
EA +F + + ++ + MI + Q G+ E+A +LF +M +KPN F +L+ A
Sbjct: 477 EAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCA 536
Query: 328 SLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++ G + + + G+E + ++DL + G + + +S+ + D H
Sbjct: 537 RAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQND--HSD 594
Query: 387 SWNSMIGGYGLNGQMEEAK 405
+W +++ L+ + AK
Sbjct: 595 AWAALLSASSLHSNLAFAK 613
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
CLL + S ++ QGR H + I G + + T L+ MY + EA + ++
Sbjct: 429 CLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNP 488
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYF 141
L+ N MI A +Q G +E+A +LF M + N V++ +++G + G V++ YF
Sbjct: 489 SLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYF 548
Query: 142 E 142
E
Sbjct: 549 E 549
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/670 (30%), Positives = 362/670 (54%), Gaps = 8/670 (1%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
LL+ +S+N R +G L+K G + + LL MY S K A + ++
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+ N MI + G + R FD MPER+ SW ++SGF K G + + F P
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V++ + + G++ NG++ EAL+LF +L + +T +++ KACAE+ + G
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQ 208
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I G E + +SL+ + K G++ +A + +++ + D S + ++ + G
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ E+R +FD R + W+ MI+ Y + EA LF +M R + ++ + V++A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINA 327
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L L +G +H H K G+ D+ +++ L+D+YSKCG + +F + D
Sbjct: 328 CIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT--- 384
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+ NSMI Y G++++AK +F+ + ++ +SW+++ +G+ ++ F++M
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
++ + SSV+ A AS++SLE G+ + + +G D + ++L D Y K G +E
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHG 504
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
RRVFD M +E+ W M+ G A +G E+I+LF++M I P ++T + VL AC++
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYC 564
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV++G K F SM+ + P+ H++C+VD+L+R+G + EA + + MPF+ D + W+S
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+L GC + + ++A + + +L E+ YV LS I+A++G W + VRKLM E +
Sbjct: 625 ILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNV 684
Query: 686 RKSGGCSWVE 695
K+ G SW +
Sbjct: 685 TKNPGSSWTD 694
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 195/589 (33%), Positives = 314/589 (53%), Gaps = 64/589 (10%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L++ + K G ++ ++ F+ P +N++SWTA I G QN EA++ F + G P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ FSS +ACA + +G + L K G + V ++L
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNL------------------ 147
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
D++ + G + +A ++F+EMP ++EVSW+ MI Y++ G EEA
Sbjct: 148 -------------EDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 194
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F++M + L A +LKA + G VH+ V+K+G E D+F+ NAL D+YSK
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 254
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G+ + VF G++ + RN VS++ +I
Sbjct: 255 AGDMESASNVF---------------------GIDSEC------------RNVVSYTCLI 281
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
GY+E +Q + +VF E+ G PN+ TFSS++ A A+ A+LE+G LH +++K+ F
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFD 341
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D F+ + L D Y K G +E + + FD + D EI+W +V + G K++I +FE M
Sbjct: 342 EDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERM 401
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ PN +T +S+L CSH+GLV++GL YF SM+ Y + P HY+CV+D+L R+GR
Sbjct: 402 VDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGR 461
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L EA++FIN MPFEP++ W S L C+ + ++++ + A + L KL ++ VLLSNI
Sbjct: 462 LKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNI 521
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YA+ +W D +VR M + ++K G SWV+V + H F + +P+
Sbjct: 522 YANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPR 570
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 200/435 (45%), Gaps = 68/435 (15%)
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A+ R G + L+ AG+ + N L+ + K GE+D A +FD M +R++VSWT
Sbjct: 16 AKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWT 75
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
MI+ +Q+ EA R F M P
Sbjct: 76 -------------------------------AMISGLSQNSKFSEAIRTFCGMRICGEVP 104
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
FS + A ASL ++ G +H LK GI ++F+ + L D+YSKCG D VF
Sbjct: 105 TQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVF 164
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+ + KD VSW +MI GY G+ EEA
Sbjct: 165 EEMPCKD---EVSWTAMIDGYSKIGEFEEA------------------------------ 191
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F +M+ ++ S L A ++ + + G+ +H ++KLGF D+F+G ALTD
Sbjct: 192 -LLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 495 TYAKSGDIESSRRVFDRMPD-KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
Y+K+GD+ES+ VF + +N +S+T ++ G E+ ++ +++F E+ + I PNE
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T S++ AC++ +++G + + I N + + +VDM + G L +A +
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKI-NFDEDPFVSSILVDMYGKCGLLEQAIQAFDE 369
Query: 614 MPFEPDSNAWASLLS 628
+ +P AW SL+S
Sbjct: 370 IG-DPTEIAWNSLVS 383
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 178/389 (45%), Gaps = 69/389 (17%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+T+ + V+ A K LR G +HA ++ G F++N L+++YSKCGE
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGE-------- 55
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
++ A +LFD MP+RN VSW+A+ISG ++ +F
Sbjct: 56 --------------------------LDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSE 89
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F M + GE+P + FSS + A AS+ S+E GK +H +K G ++F+G+ L D
Sbjct: 90 AIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLED 149
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K G + + +VF+ MP K+E+SWT M+ G ++ G +E++ F++M +T ++
Sbjct: 150 MYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 209
Query: 555 ILSVLFACS-----------HSGLVDKGLKY-----------------FNSMEPIYNIKP 586
+ S L AC HS +V G + S ++ I
Sbjct: 210 LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 269
Query: 587 NGRH---YTCVVDMLSRSGRLSEAEDF---INSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
R+ YTC++D + ++ + + EP+ ++SL+ C +
Sbjct: 270 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 329
Query: 641 RAVKNLWKLA-EEHPAGYVLLSNIYASAG 668
+ + K+ +E P +L ++Y G
Sbjct: 330 QLHAQVMKINFDEDPFVSSILVDMYGKCG 358
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 190/443 (42%), Gaps = 105/443 (23%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G +L V + + + + G + +A ++F+ MP ++EVSWTA+I G+ K G E
Sbjct: 138 GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE-------- 189
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
EAL F K+++ V ++ S AC + + G
Sbjct: 190 -----------------------EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD-RMEKRDVVSWTVILDVFIE 262
SV + K GFE + V N+L + K G+++ A +VF E R+VVS+T ++D ++E
Sbjct: 227 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVE 286
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+ E+ +F ++ R +PN FS +
Sbjct: 287 TEQI-------------------------------EKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+ A A+ AL G +HA V+KI ++D F+S+ L+D+Y KCG + FD I +
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPT- 374
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
++WNS++ +G +G ++A ++F+ M R
Sbjct: 375 --EIAWNSLVSVFGQHGLGKDAIKIFERMVDR---------------------------- 404
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAK 498
G PN TF S+L + +E+G D + K Y V G + + D +
Sbjct: 405 ---GVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDK---TYGVVPGEEHYSCVIDLLGR 458
Query: 499 SGDIESSRRVFDRMP-DKNEISW 520
+G ++ ++ +RMP + N W
Sbjct: 459 AGRLKEAKEFINRMPFEPNAFGW 481
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 153/376 (40%), Gaps = 52/376 (13%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL 62
+R + + +F+S I C S + G+ +H +K GI E ++ + L
Sbjct: 95 CGMRICGEVPTQFAFSSAIRAC-------ASLGSIEMGKQMHCLALKFGIGSELFVGSNL 147
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP-------- 114
MY +A ++ +++ D V MI+ + G EEA F M
Sbjct: 148 EDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQ 207
Query: 115 -------------------------------ERNEVSWTALISGFMKHGRVEESMWYFE- 142
E + AL + K G +E + F
Sbjct: 208 HVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI 267
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ +NV+S+T I G+V+ + L +F++L G++PNE TFSS+ KACA
Sbjct: 268 DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQ 327
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + K F++ V + L+ + K G ++ A FD + ++W ++ VF +
Sbjct: 328 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQ 387
Query: 263 MGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTS 317
G +A +IF+ M +R N +++ ++ + +G EE F M + Y P
Sbjct: 388 HGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEE 447
Query: 318 CFSIVLSALASLKALR 333
+S V+ L L+
Sbjct: 448 HYSCVIDLLGRAGRLK 463
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/515 (36%), Positives = 284/515 (55%), Gaps = 40/515 (7%)
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-----RDVVSWTVIL 257
GL LI + ++ + L+ ++G+V+ R V + +V +I+
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+++ + G L +ARR+FDEMP ++ V+W+ +IA ++Q+ P +A LF QM R F+PN
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
S +L A S L G +HA LK G + V++ +AL+D+Y++CG
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCG------------ 238
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
M+ A+ FD MP +++VSW+A+ISG+ + +
Sbjct: 239 ----------------------HMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALH 276
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+ +M P T+SSVL A AS+ +LE+GK +H +IK G F+G L D YA
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYA 336
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K+G I+ ++RVFDR+ + +SW M+ G A+ G KE+++ FE+M + I PNE++ L
Sbjct: 337 KAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLC 396
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL ACSHSGL+D+GL YF M+ Y ++P+ HY VD+L R G L AE FI MP E
Sbjct: 397 VLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIE 455
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
P + W +LL C+ +KN ++ A + ++L +LLSNIYASAGRW D VR
Sbjct: 456 PTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVR 515
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
K+M E G++K CSWVE+ N VH F + +P+
Sbjct: 516 KMMKESGVKKQPACSWVEIENAVHLFVANDETHPR 550
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 194/395 (49%), Gaps = 45/395 (11%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
++ +V D N + ++ C ++ G + A + + + V +++ + K G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
++++ F+ P +++++WTA I GF QN +AL LF ++L G +PN T SS+ K
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
A + G + K G++ V V ++L+
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALV-------------------------- 231
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
D++ G + A+ FD MP ++EVSW+ +I+ + + G E A L +M R +F
Sbjct: 232 -----DMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNF 286
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+P +S VLSA AS+ AL G VHAH++K G++ FI N L+D+Y+K G D +
Sbjct: 287 QPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKR 346
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAII----- 423
VFD +V+ D VVSWN+M+ G +G +E + F+ M + N++S+ ++
Sbjct: 347 VFDRLVKPD---VVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSH 403
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
SG L+ + F + + + ++P+ TF +L
Sbjct: 404 SGLLDEGLY--YFELMKKYKVEPDVPHYVTFVDLL 436
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 144/381 (37%), Gaps = 97/381 (25%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T LLK S++ + G LH +K G Y+ + L+ MY
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMY---------------- 234
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G+++ AQ FDGMP ++EVSW ALISG + G E
Sbjct: 235 ---------------ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE------- 272
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
AL L K+ +P T+SS+ ACA I
Sbjct: 273 ------------------------HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQ 308
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V + K+G + + N+L+ + K G +D A+ VFDR+ K DVVS
Sbjct: 309 GKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVS---------- 358
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
W+ M+ Q G +E F QM R +PN F V
Sbjct: 359 ---------------------WNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCV 397
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG-ETKDGRLVFDSIVEKD 381
L+A + L G++ + K +E DV +DL + G + R + + +E
Sbjct: 398 LTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPT 457
Query: 382 VAHVVSWNSMIGGYGLNGQME 402
A W +++G ++ ME
Sbjct: 458 AA---VWGALLGACRMHKNME 475
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/602 (32%), Positives = 323/602 (53%), Gaps = 35/602 (5%)
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
L AQ + G+ + V+ L+S ++ G + + F++ P N + I G+ +
Sbjct: 57 LVHAQIILHGLAAQ-VVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNS 115
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
++L LF +++ +G PN+ TF + KACA + + V K G H V
Sbjct: 116 NDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQ 175
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N+++T V+ +IL AR++FD++ +R V
Sbjct: 176 NAILT---------------------AYVACRLIL----------SARQVFDDISDRTIV 204
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ MIA Y++ G+ +EA LF++M + + + +LSA + L G VH ++
Sbjct: 205 SWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYI 264
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+ G+E D ++NALID+Y+KCG + + VFD +++KDV VSW SM+ Y G +E
Sbjct: 265 VITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDV---VSWTSMVNAYANQGLVE 321
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
A ++F++MP +N VSW++II ++ Q+ +F+ M +SG +P+ +T S+L +
Sbjct: 322 NAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCS 381
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
+ L GK H I V L +L D YAK G ++++ +F MP+KN +SW V
Sbjct: 382 NTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNV 441
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ LA G+ +E+I +F+ M+ + + P+E+T +L ACSHSGLVD G YF+ M +
Sbjct: 442 IIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTF 501
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
I P HY C+VD+L R G L EA I MP +PD W +LL C+ Y N +IA++
Sbjct: 502 RISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQI 561
Query: 643 VKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHF 702
+K L +L + YVLLSN+Y+ + RW D +RK+M + G++K S++E+ +
Sbjct: 562 MKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQ 621
Query: 703 FF 704
F
Sbjct: 622 FM 623
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 195/442 (44%), Gaps = 88/442 (19%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N ++ A + + A+++FD + +R VSW ++I+G+ K
Sbjct: 174 VQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKM----------------- 216
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
GF EA+ LF ++L+ GV+ + T S+ A ++ + LG V
Sbjct: 217 --------------GFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHL 262
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I G E V N+LI + K G + A+ VFD+M +DVVSWT +++ + G +
Sbjct: 263 YIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVEN 322
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A +IF+ MP +N VSW+ +I Q G EA LF +M P+ + +LS ++
Sbjct: 323 AVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSN 382
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L G H ++ I V + N+LID+Y+KCG + +F + EK+ VVSW
Sbjct: 383 TGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKN---VVSW 439
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N +IG L+G EEA E+F +M SG
Sbjct: 440 NVIIGALALHGFGEEAIEMFKSMQA-------------------------------SGLY 468
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGT-----------ALTDTY 496
P++ TF+ +L A + H ++ +G + +D+ + T + D
Sbjct: 469 PDEITFTGLLSACS-----------HSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLL 517
Query: 497 AKSGDIESSRRVFDRMPDKNEI 518
+ G + + + +MP K ++
Sbjct: 518 GRGGFLGEAMTLIQKMPVKPDV 539
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 153/331 (46%), Gaps = 40/331 (12%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D +V N +I+ + G+L+ A+ +FD M +++ VSWT++++ + G VE ++ F
Sbjct: 271 IDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHM 330
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +NV+SW + IC VQ G EA++LF ++ SGV P++ T SI C+ D LG
Sbjct: 331 PVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGK 390
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
I V++CNSLI + K G + A +F M +++VVSW VI+ G
Sbjct: 391 QAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHG 450
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
EA +F M +E++++ +++ + SG + M RY F S F
Sbjct: 451 FGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVD--------MGRYYFDIMISTFR 502
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
I G+E ++DL + G + + + K
Sbjct: 503 I----------------------SPGVEH----YACMVDLLGRGGFLGEAMTLIQKMPVK 536
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
VV W +++G + G +E AK++ +
Sbjct: 537 --PDVVVWGALLGACRIYGNLEIAKQIMKQL 565
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 6/286 (2%)
Query: 360 LYSKCGETKDGRLVFDSIVEKDVA-HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
L +C K +LV I+ +A VV+ ++ G + A LFD +P+ N
Sbjct: 45 LLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFM 104
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
++ +I GY +F +M+ +G +PN+ TF VL A A+ + +H + I
Sbjct: 105 YNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAI 164
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
KLG + A+ Y I S+R+VFD + D+ +SW M+ G ++ G+ E+I
Sbjct: 165 KLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAIL 224
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LF+EM + + + T++S+L A S +D G ++ + I ++ + ++DM
Sbjct: 225 LFQEMLQLGVEADVFTLVSLLSASSKHCNLDLG-RFVHLYIVITGVEIDSIVTNALIDMY 283
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
++ G L A+ + M + D +W S+++ Y N+ + E AV+
Sbjct: 284 AKCGHLQFAKHVFDQM-LDKDVVSWTSMVNA---YANQGLVENAVQ 325
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 200/618 (32%), Positives = 329/618 (53%), Gaps = 50/618 (8%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V N I + GN+E A+ F+ MP R S+ AL++G+ ++ + ++ F R P
Sbjct: 17 VVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPT 76
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+++ S+ A I G + L + P+ V+F+S+ + R GL
Sbjct: 77 RDLASYNALISGLSLRRHTLPDAAAALATIP--YPPSVVSFTSLLRGYV-----RHGLLA 129
Query: 207 FGL-IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ +F+ E++ L+ L G VD AR +FD M +DVV+WT +L + ++G
Sbjct: 130 DAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGR 189
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EAR +FDEMP+RN VSW+ M++ Y Q+G A +LF M
Sbjct: 190 VDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMP----------------- 232
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
E++ A++ Y + G +D +F+++ + +A
Sbjct: 233 ----------------------ERNEVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLA-- 268
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+ N MI G+G G ++ AK +FD M +R+D +WSAII Y +++ + F EML
Sbjct: 269 -ACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTFREMLHI 327
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN + S+L A++A L+ G+++HG +++ F D++ +AL Y K G+++ +
Sbjct: 328 GIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKA 387
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+RVF K+ + W M+ G A+ G +E++++F++M + P+ +T + L ACS++
Sbjct: 388 KRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYT 447
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G V +G FNSM IKP HY C+VD+L R+G + EA I +MP EPD+ W +
Sbjct: 448 GKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGA 507
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
L+ C+ +KN +IAE + K L +L + YVLLS+IY S+GRW DA N+RK ++ + L
Sbjct: 508 LMGACRMHKNAEIAEISAKKLLELEPGNAGPYVLLSHIYTSSGRWEDASNMRKFISSRHL 567
Query: 686 RKSGGCSWVEVRNQVHFF 703
KS GCSW+E +VH F
Sbjct: 568 NKSLGCSWIEYDKRVHLF 585
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 201/427 (47%), Gaps = 50/427 (11%)
Query: 31 ITSQNLVIQGRALHGHLIKTGIHKERYLTTR-------LLIMYLGSRKSLEANEIVKDLN 83
+ S +++G HG L+ I R + R LL +L + + EA ++ ++
Sbjct: 112 VVSFTSLLRGYVRHG-LLADAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMP 170
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
D+V M++ Q G ++EA+ LFD MP+RN VSWTA++SG+ ++G+V + FE
Sbjct: 171 AKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEV 230
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP--------------------- 182
P +N +SWTA + G++Q G +A +LF + + +
Sbjct: 231 MPERNEVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVF 290
Query: 183 ------NEVTFSSICKACAEINDFRL-GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
++ T+S+I KA E N+F + LS F + G + S++T+ + +
Sbjct: 291 DRMCERDDGTWSAIIKAY-EQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVL 349
Query: 236 DLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
D R V M +R D+ + + ++ ++I+ G+L +A+R+F ++ V W+ MI Y
Sbjct: 350 DYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGY 409
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV-HAHVLKIGIEKD 350
Q G EEA +F M P+ + L+A + ++ G + ++ K GI+
Sbjct: 410 AQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPG 469
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQME----EAK 405
+ ++DL + G + + ++ VE D V W +++G ++ E AK
Sbjct: 470 LEHYACMVDLLGRAGLVDEALYLIKTMPVEPD---AVIWGALMGACRMHKNAEIAEISAK 526
Query: 406 ELFDNMP 412
+L + P
Sbjct: 527 KLLELEP 533
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/700 (29%), Positives = 356/700 (50%), Gaps = 97/700 (13%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
T F+ +++ +LK + ++ G++LH +K+ I YL+ +++Y S+ +L
Sbjct: 2 TQFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLY--SKCNL- 58
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
L A F+ E N S+ ALI+ + K +
Sbjct: 59 ----------------------------LTTAHHAFNQTHEPNVFSFNALIAAYAKESLI 90
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ F++ P +++S+ I + G + AL LF ++ E G+ + TFS + AC
Sbjct: 91 HVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITAC 150
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
N L + L F +GF+ +VSV NSL+T K G ++ A VF+ M
Sbjct: 151 C--NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGM--------- 199
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
GE R+EVSW+ MI Y Q +A L+R M F+
Sbjct: 200 ------------GE--------EVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEI 239
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + VL+ + ++ L G+ HA +K G K+ + + LID+Y+KCG
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCG--------- 290
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
M E++++F+ + + V W+ +ISGY ++K+ +
Sbjct: 291 ------------------------AGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSV 326
Query: 435 -VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-VFLGTAL 492
F +M +G P+ +F + A ++++S +GK H +K P + + + AL
Sbjct: 327 EALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNAL 386
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
Y+K G+++ +R++F RMP N ++ ++ G A+ G ES+NLFE+M SI P
Sbjct: 387 VTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTS 446
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+T++S+L AC+H+G V++G KYFN M+ I+ I+P HY+C++D+L R+G+LSEAE I+
Sbjct: 447 ITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLID 506
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
+MPF P S AWA+LL C+ Y N ++AE+A +L + Y++L+++Y++A +W +
Sbjct: 507 TMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEE 566
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A +RKLM ++G+RK GCSW+E+ +VH F + + +P+
Sbjct: 567 AARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPR 606
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 215/698 (30%), Positives = 360/698 (51%), Gaps = 79/698 (11%)
Query: 93 MINANIQWGNLEEAQRL---FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
++ + I G+ E ++L + E N T L+S + K G + E+ F +N+
Sbjct: 91 LLQSCIDQGSAELGRKLHARIGLLEEMNPFVETKLVSMYAKCGSLGEARKVFGEMRERNL 150
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+W+A I + + E ++ F ++E G+ P+E I +AC D G + L
Sbjct: 151 YAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSL 210
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ + G ++ V NS++ + K G + AR F+ M+ RD VSW I+ + + G+L ++
Sbjct: 211 VIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKS 270
Query: 270 RRIFDEMPERN----EVSWSVMIARYNQSG-----------------YPE---------- 298
++F++M E V+W+++I Y+QSG P+
Sbjct: 271 HQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISG 330
Query: 299 --------EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
+A LFR+M +PN + +SA ASLKAL+ GM +H+ +KIG +D
Sbjct: 331 FAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVED 390
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDV---------------------------- 382
+ + N+LID+YSK GE +D R VFD I++KDV
Sbjct: 391 LLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHE 450
Query: 383 ----AHVVSWNSMIGGYGLNGQMEEAKELF-----DNMPKRNDVSWSAIISGYLEHKQFD 433
+VV+WN+MI GY NG ++A +LF D + KR+ SW+++I+GYL++ +
Sbjct: 451 SDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKN 510
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+F +M PN T S+L A A++ + +K K++HG I++ ++ + L
Sbjct: 511 KALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLI 570
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
DTYAKSG+I ++ +F + K+ ISW ++ G G + +++LF++M K + P+
Sbjct: 571 DTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRG 630
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T LS+++A S SG+VDKG + F+SM Y I P H++ ++D+L RSG+L EA +FI
Sbjct: 631 TFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIED 690
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
M EPDS WA+LL+ K + N +A RA + L +L + + + + +YA +G++ D
Sbjct: 691 MAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDV 750
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+RK ++ GCSW+E +N VH F P
Sbjct: 751 SKLRKSEKRSETKQPLGCSWIEAKNIVHTFVADDRSRP 788
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 256/538 (47%), Gaps = 90/538 (16%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H +I+ G++ ++ +L +Y + A ++++ D V N +I Q
Sbjct: 204 GKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQ 263
Query: 100 WGNLEEAQRLFDGMPERN----EVSWTALISGFMKHGRVEESMWYFER----NPFQNVIS 151
G LE++ +LF+ M E V+W LI+ + + G+ +++M ++ +V +
Sbjct: 264 KGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFT 323
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
WT+ I GF QN +AL+LF ++L +G++PN VT +S ACA + + G+ + +
Sbjct: 324 WTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAV 383
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL-------------D 258
K G + + V NSLI + K GE++ AR VFD + K+DV +W ++ D
Sbjct: 384 KIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYD 443
Query: 259 VFIEM----------------------GDLGEARRIF-----DEMPERNEVSWSVMIARY 291
+FI+M GD +A +F D + +R+ SW+ +IA Y
Sbjct: 444 LFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGY 503
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q+G+ +A +FRQM + +PN+ +L A A+L A + +H +L+ + ++
Sbjct: 504 LQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSEL 563
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
++N LID Y+K G + +F I KD ++SWNS+I GY L+G + A +LFD M
Sbjct: 564 SVANCLIDTYAKSGNIVYAQTIFQGISSKD---IISWNSLIAGYVLHGCSDSALDLFDQM 620
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
K G P++ TF S++ A + ++KGK
Sbjct: 621 TKM-------------------------------GVKPSRGTFLSIIYAFSLSGMVDKGK 649
Query: 472 DLHGKIIKLGFPYDVFLG----TALTDTYAKSGDI-ESSRRVFDRMPDKNEISWTVMV 524
+ +++ Y + G +A+ D +SG + E+ + D + + W ++
Sbjct: 650 QVFSSMME---DYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALL 704
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 171/378 (45%), Gaps = 48/378 (12%)
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI--EKDVFISNALIDLYSKCGETKDG 370
KPNT + +L + + G +HA +IG+ E + F+ L+ +Y+KCG
Sbjct: 84 KPNT--YMQLLQSCIDQGSAELGRKLHA---RIGLLEEMNPFVETKLVSMYAKCGS---- 134
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+ EA+++F M +RN +WSA+I Y +
Sbjct: 135 ------------------------------LGEARKVFGEMRERNLYAWSAMIGAYSREQ 164
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+ V F M+ G +P++ +L A + E GK +H +I+ G +++ +
Sbjct: 165 MWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSN 224
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
++ YAK G + +RR F+ M ++ +SW ++ G + G ++S LFE+M++ I P
Sbjct: 225 SILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEP 284
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+T ++ + S SG D ++ ME + I P+ +T ++ +++ R S+A +
Sbjct: 285 GLVTWNILINSYSQSGKCDDAMELMKKMES-FRIVPDVFTWTSMISGFAQNNRRSQALEL 343
Query: 611 INSM---PFEPDSNAWASLLSGCKTYK--NEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
M EP+ S +S C + K + + +V E+ G L+ ++Y+
Sbjct: 344 FREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLI-DMYS 402
Query: 666 SAGRWIDAMNVRKLMTEK 683
+G DA V ++ +K
Sbjct: 403 KSGELEDARRVFDMILKK 420
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/695 (30%), Positives = 343/695 (49%), Gaps = 80/695 (11%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA-----NEIV--- 79
LK + Q + + R ++ H++ T L+ Y+ + S EA N V
Sbjct: 64 LKQLVKQGQLCKAR----YMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPG 119
Query: 80 --KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+D + + C + NI +G L + G+ VS +ALI +MK G++E+
Sbjct: 120 PQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVS-SALIDMYMKVGKIEQG 178
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
FE+ +NV+SWTA I G V G++ E L F ++ S V + TF+ KA A+
Sbjct: 179 CRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADS 238
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+ G ++ K GF++ V N+L T+ K G+ D +F++M DVV
Sbjct: 239 SLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVV------ 292
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
SW+ +I+ Y Q G E A F++M + PN
Sbjct: 293 -------------------------SWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKY 327
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
F+ V+S+ A+L A + G +H HVL++G+ + ++N++I LYSKCG K LV
Sbjct: 328 TFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLV---- 383
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
F + +++ +SWS IIS Y + F
Sbjct: 384 ------------------------------FHGITRKDIISWSTIISVYSQGGYAKEAFD 413
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+ M G PN+ SSVL S+A LE+GK +H ++ +G ++ + +A+ Y+
Sbjct: 414 YLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYS 473
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G ++ + ++F+ M + ISWT M+ G AE GY++E+INLFE++ + P+ + +
Sbjct: 474 KCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIG 533
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL AC+H+G+VD G YF M +Y I P+ HY C++D+L R+GRLSEAE I SMPF
Sbjct: 534 VLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFH 593
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
D W++LL C+ + + + L +L ++ L+NIYA+ GRW +A ++R
Sbjct: 594 TDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIR 653
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
KLM KG+ K G SWV V +Q++ F +P+
Sbjct: 654 KLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQ 688
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 220/672 (32%), Positives = 330/672 (49%), Gaps = 96/672 (14%)
Query: 44 HGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNL 103
H ++KTG+H Y ++LL + C+++ +
Sbjct: 2 HAQMVKTGLHNTNYALSKLLEL--------------------------CVVSPH------ 29
Query: 104 EEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
FDG+P V FE N++ W + G +
Sbjct: 30 ------FDGLPYAVSV---------------------FETXQEPNLLIWNTMLRGLASSS 62
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
L+++++++ G PN TF + K+CA+ F G + + K G E
Sbjct: 63 DLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHT 122
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
SLI++ + G ++ AR VFD +RDVVS T ++ + GD+ AR++FD + ER+ VS
Sbjct: 123 SLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVS 182
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV- 342
W+ MI Y ++ EEA LF++M R + +P+ VLSA A ++ G +H V
Sbjct: 183 WNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVD 242
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
G + I NA I LYSKCG+ + +F+ + KD VVSWN++IGGY +
Sbjct: 243 DHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKD---VVSWNTLIGGYTHMNLYK 299
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
EA +F EML SGE PN T SVL A A
Sbjct: 300 EA-------------------------------LLLFQEMLRSGESPNDVTMLSVLPACA 328
Query: 463 SVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ +++ G+ +H I K G L T+L D YAK GDIE++ +VF+ M K+ SW
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSW 388
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ G A G A + +LF M K I P+++T++ +L ACSHSGL+D G F S+
Sbjct: 389 NAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ 448
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
YNI P HY C++D+L +G EAE+ I+ MP EPD W SLL CK + N ++AE
Sbjct: 449 DYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAE 508
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
+ L ++ E+ YVLLSNIYA+AGRW D +R+++ KG++K GCS +E+ + V
Sbjct: 509 SFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVV 568
Query: 701 HFFFQKTDHNPK 712
H F +P+
Sbjct: 569 HEFIIGDKLHPQ 580
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 193/420 (45%), Gaps = 72/420 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +GR +H ++K G +RY T L+ MY +
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARN----------------- 131
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G LE+A+++FD +R+ VS TALI+G+ G V + F+
Sbjct: 132 --------------GRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITE 177
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW A I G+V+N EAL+LF +++ + V+P+E T S+ ACA+ LG +
Sbjct: 178 RDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREI 237
Query: 207 FGLI-FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
L+ GF + + N+ I L K G+V++A +F+ + +DVVSW +
Sbjct: 238 HTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTL--------- 288
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
I Y +EA LF++M R PN VL A
Sbjct: 289 ----------------------IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 326
Query: 326 LASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A L A+ G +H ++ K G+ + +LID+Y+KCG+ + VF+S++ K ++
Sbjct: 327 CAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLS 386
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVF 439
SWN+MI G+ ++G+ A +LF M K +D++ ++S DL +F
Sbjct: 387 ---SWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIF 443
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 8/242 (3%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+LI + K G +E + F +++ SW A I GF +G + A LF ++ ++G++
Sbjct: 358 TSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIE 417
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARS 240
P+++T + AC+ LG +F + + + +I L G A
Sbjct: 418 PDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEE 477
Query: 241 VFDRME-KRDVVSWTVILDVFIEMGDL----GEARRIFDEMPERNEVSWSVMIARYNQSG 295
+ M + D V W +L G+L A+++ + PE N S+ ++ Y +G
Sbjct: 478 IIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPE-NSGSYVLLSNIYATAG 536
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH-VLKIGIEKDVFIS 354
E+ R+ + K C SI + ++ + +H + + ++ E DV +
Sbjct: 537 RWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLE 596
Query: 355 NA 356
A
Sbjct: 597 EA 598
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 227/729 (31%), Positives = 355/729 (48%), Gaps = 107/729 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L++ T +I G+ H H+IKT +L LL MY ++ A ++ + +
Sbjct: 25 LVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRN 84
Query: 87 LVVHNCMINANIQWGNLEEAQRLF----------DGMPERNEVS---------------- 120
+V N +I+ Q G E LF D N +S
Sbjct: 85 VVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHA 144
Query: 121 -------------WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
+LI + K GR++ + FE + +SW + I G+V+ G + E
Sbjct: 145 LITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDE 204
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
L+L +K+L G+ N S KAC + F + L
Sbjct: 205 MLRLLVKMLRHGLNLNSYALGSALKACG-----------------SNFSSSIECGKMLHG 247
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
++K+G +DL DVV T +LD + ++GDL +A +IF MP+ N V ++ M
Sbjct: 248 CAVKLG-LDL-----------DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAM 295
Query: 288 IARYNQ-----SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
IA + Q + EA LF +M KP+ FS +L A ++++A G +HA +
Sbjct: 296 IAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI 355
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
K ++ D FI NAL++LYS L+G +E
Sbjct: 356 FKYNLQSDEFIGNALVELYS----------------------------------LSGSIE 381
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
+ + F + PK + VSW+++I G++++ QF+ +F+E+L SG P++ T S +L A A
Sbjct: 382 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 441
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
++A+++ G+ +H IK G + + YAK GDI+S+ F + + +SW+V
Sbjct: 442 NLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSV 501
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M+ A+ G AKE+++LFE M+ + I PN +T L VL ACSH GLV++GL+YF M+ +
Sbjct: 502 MISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDH 561
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
I PN +H C+VD+L R+GRL+EAE FI FE D W SLLS C+ +K +R
Sbjct: 562 GITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRV 621
Query: 643 VKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHF 702
+ + +L E A YVLL NIY AG + A +R LM ++G++K G SW+EV N VH
Sbjct: 622 AERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHS 681
Query: 703 FFQKTDHNP 711
F +P
Sbjct: 682 FVAGDRSHP 690
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 205/458 (44%), Gaps = 74/458 (16%)
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G+ + VT++ + + G + K F+ + + N+L+ + K GE D+A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+ +FDRM KR+VVSW + I+ Y Q G+
Sbjct: 74 KKLFDRMPKRNVVSWNSL-------------------------------ISGYTQMGFYH 102
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
E LF++ + + FS LS LR G +HA + G+ V ++N+LI
Sbjct: 103 EVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLI 162
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+Y KCG RLVF+S E D VSWNS+I GY G +E
Sbjct: 163 DMYCKCGRIDWARLVFESADELD---SVSWNSLIAGYVRIGSNDE--------------- 204
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGK 476
+ + +ML G N S L C S +S+E GK LHG
Sbjct: 205 ----------------MLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGC 248
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE-----SG 531
+KLG DV +GTAL DTYAK GD+E + ++F MPD N + + M+ G +
Sbjct: 249 AVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADE 308
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+A E++ LF EM+ + P+E T S+L ACS + G K ++ YN++ +
Sbjct: 309 FANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECG-KQIHAQIFKYNLQSDEFIG 367
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+V++ S SG + + +S P + D +W SL+ G
Sbjct: 368 NALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVG 404
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 186/467 (39%), Gaps = 68/467 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ LHG +K G+ + + T LL Y +A +I K + ++V++N MI +Q
Sbjct: 242 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 301
Query: 100 WGNL-----EEAQRLFDGMPER-------------------------------------- 116
+ EA LF M R
Sbjct: 302 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 361
Query: 117 -NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+E AL+ + G +E+ + F P +V+SWT+ I G VQNG L LF +L
Sbjct: 362 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 421
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
L SG KP+E T S + ACA + + G + K G + NS I + K G++
Sbjct: 422 LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDI 481
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARY 291
D A F + D+VSW+V++ + G EA +F+ M N +++ ++
Sbjct: 482 DSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 541
Query: 292 NQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIE 348
+ G EE R F M + + PN + ++ L R+G A ++ G E
Sbjct: 542 SHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLG-----RAGRLAEAESFIMDSGFE 596
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D + +L+ T G+ V + ++E + S+ + Y G A E+
Sbjct: 597 GDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIR 656
Query: 409 DNMPKRN-----DVSW-------SAIISGYLEHKQFDLVFAVFNEML 443
+ M R +SW + ++G H +++ EML
Sbjct: 657 NLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEML 703
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 219/678 (32%), Positives = 339/678 (50%), Gaps = 99/678 (14%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +H +IKTG+H Y ++LL C+++ +
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLL--------------------------EFCVVSPH--- 35
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
FDG P V F+ N++ W G
Sbjct: 36 ---------FDGFPYAISV---------------------FDTIQEPNLLIWNTMFRGHA 65
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ ALKL+L ++ G+ P+ TF + K+CA+ + G + G + K GF+ +
Sbjct: 66 LSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIY 125
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V SLI++ + G ++ AR VFD RDVVS+T ++ ++ G + A+++FDE+P ++
Sbjct: 126 VHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKD 185
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVH 339
VSW+ MI+ Y ++G +EA LF++M + +P+ S V+SA A ++ G HVH
Sbjct: 186 VVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVH 245
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ + G ++ I NALIDLYSK GE
Sbjct: 246 SWINDHGFASNLKIVNALIDLYSKFGE--------------------------------- 272
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+E A ELFD + ++ +SW+ +I GY + +F EML SGE PN T S+L
Sbjct: 273 -VETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 331
Query: 460 ASASVASLEKGKDLHGKIIKL--GFPYDVF-LGTALTDTYAKSGDIESSRRVFDR-MPDK 515
A A + +++ G+ +H I K G +V L T+L D YAK GDI+++++VFD M ++
Sbjct: 332 ACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNR 391
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ +W M+ G A G A + ++F M I P+++T + +L ACSHSG++D G F
Sbjct: 392 SLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIF 451
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
SM Y I P HY C++D+L SG EAE+ IN+MP EPD W SLL CK + N
Sbjct: 452 RSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGN 511
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS-GGCSWV 694
++ E K L K+ + YVLLSNIYA+AGRW + +R L+ +KG++K GCS +
Sbjct: 512 LELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSI 571
Query: 695 EVRNQVHFFFQKTDHNPK 712
E+ + VH F +P+
Sbjct: 572 EIDSVVHEFIIGDKLHPQ 589
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 197/432 (45%), Gaps = 70/432 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK + +G+ +HGH++K G + Y+ T L+ MY + + +A ++ + D
Sbjct: 95 LLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRD 154
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + +I + G +E AQ+LFD +P ++ VSW A+ISG+++ G +E++ F+
Sbjct: 155 VVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKE--- 211
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++ + V+P+E T ++ ACA+ + LG V
Sbjct: 212 ---------------------------MMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I GF ++ + N+LI L K GEV+ A +FD + +DV+SW ++ + M
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM--- 301
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+EA LF++M R PN +L A
Sbjct: 302 ----------------------------NLYKEALLLFQEMLRSGETPNDVTMLSILPAC 333
Query: 327 ASLKALRSGMHVHAHV---LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A L A+ G +H ++ LK + + +LID+Y+KCG+ + VFDS +
Sbjct: 334 AHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSN--R 391
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ +WN+MI G+ ++G+ A ++F M + +D+++ ++S DL +F
Sbjct: 392 SLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIF 451
Query: 440 NEMLLSGEIPNK 451
M EI K
Sbjct: 452 RSMTRGYEITPK 463
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 328/583 (56%), Gaps = 52/583 (8%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+I+ K GR+ E+ F+ +VI+WT I G+++ G EA +LF ++ K N
Sbjct: 58 MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRV---DAKKN 114
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
VT++++ N +S +F K+V N++I + G +D A +F+
Sbjct: 115 VVTWTAMVGGYIRSNK----ISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 170
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+M +R+VVSW ++ + + G + EARR+FD MPER+ +SW+ MIA +++G +EA L
Sbjct: 171 KMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLL 230
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M E++V NA+I Y++
Sbjct: 231 FDRMP---------------------------------------ERNVVSWNAMITGYAQ 251
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
+ +F+ + E+D+ SWN+MI G NG + A++LF+ MPK+N +SW+ +I
Sbjct: 252 NLRLDEALDLFERMPERDLP---SWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMI 308
Query: 424 SGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+G ++ + + +F+ ML +G PN+ TF SVL A +++A L +G+ +H I K +
Sbjct: 309 TGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVY 368
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDR--MPDKNEISWTVMVRGLAESGYAKESINLF 540
F+ +AL + Y+K G++ ++R++FD ++ +SW ++ A GY KE+IN F
Sbjct: 369 QDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFF 428
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+EM K+ P+++T + +L ACSH+GLV++GLKYF+ + +I HY C+VD+ R
Sbjct: 429 KEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGR 488
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+GRL EA FI + +P + W +LL+GC + N +I ++A K L ++ E+ Y+LL
Sbjct: 489 AGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLL 548
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
SNIYAS G+W +A VR M +KGL+K GCSW+EV N+VH F
Sbjct: 549 SNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVF 591
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 239/506 (47%), Gaps = 66/506 (13%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM-PERNEVSWTALISGFMKH 131
+EA + ++ D++ +I+ I+ G +EEA+RLFD + ++N V+WTA++ G+++
Sbjct: 69 MEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRS 128
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
++ ++ F P +NV+SW I G+ QNG A+ LF K+ E V S +
Sbjct: 129 NKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLA 188
Query: 192 KACAEINDFR------------------LGLSVFG------LIFKAGFEKHVSVCNSLIT 227
+ C I + R GLS G L+F E++V N++IT
Sbjct: 189 Q-CGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMIT 247
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ +D A +F+RM +RD+ SW ++ I+ GDL AR++F+EMP++N +SW+ M
Sbjct: 248 GYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTM 307
Query: 288 IARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
I Q G EEA ++F R ++ KPN F VL A ++L L G VH + K
Sbjct: 308 ITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTV 367
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ F+ +ALI++YSKCGE R +FD + +VSWN +I Y +G +EA
Sbjct: 368 YQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQ-RDLVSWNGIIAAYAHHGYGKEAIN 426
Query: 407 LFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-------------- 448
F M K +DV++ ++S + F+E++ I
Sbjct: 427 FFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLC 486
Query: 449 -------------------PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
P+ + ++L A+++ GK K++++ P +
Sbjct: 487 GRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVE-PENAGTY 545
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDK 515
L++ YA +G + RV +M DK
Sbjct: 546 LLLSNIYASTGKWREAARVRLKMKDK 571
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 214/732 (29%), Positives = 377/732 (51%), Gaps = 77/732 (10%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK-- 80
T L +L +S V++GRALH + + ++ + L+ MY ++A + +
Sbjct: 9 TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLF--------------------------DGMP 114
D ++V N MI A Q G+ EA L+ G
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGRE 128
Query: 115 ERNEVSWT----------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
N V ++ AL++ + + G V ++ F+ ++ SW A I Q+G
Sbjct: 129 IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGD 188
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
AL++F K ++ VKPN T+ ++ + G + I GF+
Sbjct: 189 WSGALRIF-KEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT------- 240
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
D+V T +++++ + G EAR +FD+M +R+ VSW
Sbjct: 241 ------------------------DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSW 276
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+VMI Y +G EA L++++ FK + F +L A +S+KAL G VH+H+L+
Sbjct: 277 NVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE 336
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG---QM 401
G++ +V ++ AL+++Y+KCG ++ R VF+++ +D V+W+++IG Y NG
Sbjct: 337 RGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDA---VAWSTLIGAYASNGYGKDA 393
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCA 460
+A+++FD + R+ +SW+A+I+ Y+++ +F EM +G P+ TF +VL A
Sbjct: 394 RKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEA 453
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
AS+ L + K LH +I + +V + L + YA+ G +E + R+F +K +SW
Sbjct: 454 CASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSW 513
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T MV ++ G E+++LF+EM+ + P+++T S+LF C+H G +++G +YF M
Sbjct: 514 TAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAE 573
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
++ + P H+ +VD+L RSGRL +A++ + SMPFEPD AW + L+ C+ + ++ E
Sbjct: 574 LHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGE 633
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
A + +++L A Y+ +SNIYA+ G W +VRK M E+GL+K G S++EV ++
Sbjct: 634 AAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKL 693
Query: 701 HFFFQKTDHNPK 712
H F ++P+
Sbjct: 694 HEFSSGGKYHPR 705
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 139/585 (23%), Positives = 266/585 (45%), Gaps = 125/585 (21%)
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P+ VTF ++ +C+ D G ++ I + FE+ V N+LI++ K + ARS
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 241 VFDRME--KRDVVSWTVILDVFIEMGDLGEARRIFDEMPER------------------- 279
VF+ M+ +R+VVSW ++ + + G EA ++ M +
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 280 -------NEVSWS----------VMIARYNQSGYPEEAFRLFRQMT-------------- 308
N V +S ++ Y + G +A R+F+ +
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH 183
Query: 309 ----------------RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+ KPN++ + V+S ++ + L G +HA ++ G + D+
Sbjct: 184 SQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLV 243
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
++ ALI++Y KCG + + R VFD + ++D +VSWN MIG Y LNG EA EL+ +
Sbjct: 244 VATALINMYGKCGSSHEAREVFDKMKKRD---MVSWNVMIGCYVLNGDFHEALELYQKLD 300
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
+ G K+TF S+L A +SV +L +G+
Sbjct: 301 -------------------------------MEGFKRTKATFVSILGACSSVKALAQGRL 329
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+H I++ G +V + TAL + YAK G +E +R+VF+ M +++ ++W+ ++ A +GY
Sbjct: 330 VHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGY 389
Query: 533 ---AKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
A+++ +F+ + + +I+ N + V C+ + +K F M +KP+
Sbjct: 390 GKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVA-----AMKIFREMTGAAGLKPDA 444
Query: 589 RHYTCVVDMLSRSGRLSEAEDF---INSMPFEPD---SNAWASLLSGCKTYKNEQIAERA 642
+ V++ + GRLSE + I+ E + +N ++ + C + + AER
Sbjct: 445 VTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEE---AER- 500
Query: 643 VKNLWKLAEEHP-AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L+ A+E + + ++ GR+ +A+++ + M +G++
Sbjct: 501 ---LFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 209/683 (30%), Positives = 347/683 (50%), Gaps = 100/683 (14%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG------------- 132
++VV N +I + L++A LFDGM R+ VSW+ ++ GF K G
Sbjct: 112 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 171
Query: 133 ------------------------------------RVEESMWYFERNPFQNVISWTAAI 156
+E++ + F++ +++++WT I
Sbjct: 172 RCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMI 231
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+ + G + E+L LF K+ E GV P++V ++ ACA
Sbjct: 232 GGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA--------------------- 270
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRI 272
K+G + AR + D ++++ DV+ T ++D++ + G + AR I
Sbjct: 271 --------------KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
FD M E+N +SWS MIA Y G +A LFR M P+ + +L A + + L
Sbjct: 317 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNL 376
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
VHA G+ +++ ++N L+ YS D +FD + +D VSW+ M+
Sbjct: 377 TQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDS---VSWSVMV 433
Query: 393 GGYGLNGQMEEAKELFDNMPK---RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
GG+ G F + + R D +++ G +F++M G +P
Sbjct: 434 GGFAKVGDYMNCFGTFRELIRCGARPD-NYTLPFCGNANES-----LVLFDKMREEGVVP 487
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+K +V+ A A + ++ K + + I + F DV LGTA+ D +AK G +ES+R +F
Sbjct: 488 DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 547
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
DRM +KN ISW+ M+ G +++++LF M ++ I PN++T++S+L+ACSH+GLV+
Sbjct: 548 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 607
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+GL++F+ M Y+++ + +HYTCVVD+L R+GRL EA I SM E D W + L
Sbjct: 608 EGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+T+K+ +AE+A +L +L ++P Y+LLSNIYA+AGRW D R LM+++ L+K
Sbjct: 668 CRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIP 727
Query: 690 GCSWVEVRNQVHFFFQKTDHNPK 712
G +W+EV N+ H F +P+
Sbjct: 728 GWTWIEVDNKSHQFSVGDTTHPR 750
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 221/516 (42%), Gaps = 119/516 (23%)
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
C+ ++ SV G++ +++ V N LI +D A +FD M RD
Sbjct: 91 CRNLTQVRQVHAQASVHGML------ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 251 VSWTVILDVFIEMGD--------------------------------------------- 265
VSW+V++ F ++GD
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYV 204
Query: 266 ----LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ +AR +FD+M ER+ V+W+VMI Y + G E+ LF +M P+
Sbjct: 205 KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 264
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
V+ A A L A+ + ++ + + DV + A+ID+Y+KCG + R +FD + EK+
Sbjct: 265 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN 324
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V+SW++MI YG +GQ +A +L F
Sbjct: 325 ---VISWSAMIAAYGYHGQGRKALDL-------------------------------FRM 350
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
ML SG +P+K T +S+L A + +L + + +H + G ++ + L Y+
Sbjct: 351 MLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRA 410
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAE----------------------------SGYA 533
++ + +FD M ++ +SW+VMV G A+ G A
Sbjct: 411 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNA 470
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
ES+ LF++M + + P+++ +++V+FAC+ G + K + + + + T
Sbjct: 471 NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RTIDDYIQRKKFQLDVILGTA 529
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++DM ++ G + A + + M E + +W+++++
Sbjct: 530 MIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAA 564
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 211/510 (41%), Gaps = 90/510 (17%)
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
L L+ MY+ R+ +A + + DLV MI + G E+ LF+ M E
Sbjct: 195 LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 254
Query: 118 EVS---------------------------------------WTALISGFMKHGRVEESM 138
V TA+I + K G VE +
Sbjct: 255 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 314
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
F+R +NVISW+A I + +G +AL LF +L SG+ P+++T +S+ AC
Sbjct: 315 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCR 374
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+ V G +++ V N L+ +D A +FD M RD VSW+V++
Sbjct: 375 NLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 434
Query: 259 VFIEMGDLGEARRIFDEM------PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
F ++GD F E+ P+ + + G E+ LF +M
Sbjct: 435 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPF---------CGNANESLVLFDKMREEGV 485
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
P+ V+ A A L A+ + ++ + + DV + A+ID+++KCG + R
Sbjct: 486 VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 545
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+FD + EK+ V+SW++MI YG +GQ +A +LF
Sbjct: 546 IFDRMEEKN---VISWSAMIAAYGYHGQGRKALDLFP----------------------- 579
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTA 491
ML SG +PNK T S+L A + +E+G + + DV T
Sbjct: 580 --------MMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTC 631
Query: 492 LTDTYAKSGDIESSRRVFDRMP-DKNEISW 520
+ D ++G ++ + ++ + M +K+E W
Sbjct: 632 VVDLLGRAGRLDEALKLIESMTVEKDEGLW 661
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 54/356 (15%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+SAL + + L VHA G+ +++ ++N LI YS D +FD + +D
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRD- 143
Query: 383 AHVVSWNSMIGGYGLNG------------------------------------------- 399
VSW+ M+GG+ G
Sbjct: 144 --SVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVD 201
Query: 400 ------QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
++E+A+ LFD M +R+ V+W+ +I GY E + + +F +M G +P+K
Sbjct: 202 MYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVA 261
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+V+ A A + ++ K + + I + F DV LGTA+ D YAK G +ES+R +FDRM
Sbjct: 262 MVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME 321
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+KN ISW+ M+ G +++++LF M + + P+++T+ S+L+AC + + + ++
Sbjct: 322 EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQ-VR 380
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ ++ + N +V S L +A + M DS +W+ ++ G
Sbjct: 381 QVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVR-DSVSWSVMVGG 435
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 214/738 (28%), Positives = 368/738 (49%), Gaps = 109/738 (14%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E NSY +L+ + + G+ +H +I GI + L +L+ MY+ +
Sbjct: 91 ELGLNSYCS----VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLV 146
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE------------------ 115
+ +I + + + N +++ + GN E+ LF M +
Sbjct: 147 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 206
Query: 116 ---------------------RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
N +LI+ + K G VE + F+ +V+SW +
Sbjct: 207 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 266
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I G V NGFS L++F+++L GV+ + T S+ ACA I + LG ++ G KA
Sbjct: 267 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC 326
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
F + V N+L LD++ + G+L A +F
Sbjct: 327 FSEEVVFSNTL-------------------------------LDMYSKCGNLNGATEVFV 355
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+M + VSW+ +IA Y + G +A LF +M +P+ + ++ A A +L
Sbjct: 356 KMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 415
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VH++V+K G+ ++ ++NALI++Y+KCG
Sbjct: 416 GRDVHSYVIKNGMGSNLPVTNALINMYAKCG----------------------------- 446
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
+EEA+ +F +P ++ VSW+ +I GY ++ + +F +M + P+ T
Sbjct: 447 -----SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFK-PDDITM 500
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
+ VL A A +A+L+KG+++HG I++ G+ D+ + AL D YAK G + ++ +FD +P
Sbjct: 501 ACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPK 560
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
K+ ISWTVM+ G G+ E+I+ F EM I P+E + ++L ACSHSGL+++G K+
Sbjct: 561 KDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKF 620
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
FNSM ++P HY CVVD+L+R G LS+A FI SMP +PD+ W LLSGC+ +
Sbjct: 621 FNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHH 680
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+ ++AE+ +++++L ++ YV+L+N+YA A +W + +RK M ++G +++ GCSW+
Sbjct: 681 DVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWI 740
Query: 695 EVRNQVHFFFQKTDHNPK 712
EV + + F +P+
Sbjct: 741 EVGGKFNIFVAGNSKHPQ 758
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 168/389 (43%), Gaps = 57/389 (14%)
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I ++ + G A L + Y N+ C VL A K+L G VH+ ++ GI
Sbjct: 68 INKFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSLEDGKRVHSVIISNGI 125
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D + L+ +Y CG+ GR +FD I+ V WN ++ Y G E+ L
Sbjct: 126 SVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK---VFLWNLLMSEYAKIGNFRESVSL 182
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F M K G + N TF+ VL A++ +
Sbjct: 183 FKKMQKL-------------------------------GVVGNCYTFTCVLKCFAALGKV 211
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++ K +HG ++KLGF + + +L Y K G +ES+ +FD + + + +SW M+ G
Sbjct: 212 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 271
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG-------LVDKGLKYFNSMEP 580
+G++ + +F +M + + T++SVL AC++ G L G+K S E
Sbjct: 272 VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEV 331
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+++ ++DM S+ G L+ A + M + +W S+++ Y E +
Sbjct: 332 VFS--------NTLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSIIAA---YVREGLYS 379
Query: 641 RAVKNLWKLAEE--HPAGYVLLSNIYASA 667
A+ ++ + P Y + S ++A A
Sbjct: 380 DAIGLFDEMQSKGVRPDIYTVTSIVHACA 408
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 315/592 (53%), Gaps = 64/592 (10%)
Query: 123 ALISGFMK-HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
LI F+K G + + FE+ P +N ++WT I +Q G++ EA+ LFL+++ SG +
Sbjct: 209 GLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYE 268
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T S + ACA + LG + + G V LI + K VD
Sbjct: 269 PDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC-SVD----- 322
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ-SGYPEEA 300
G + AR+IFD++ + N SW+ MI Y Q GY EEA
Sbjct: 323 ----------------------GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LFR M PN FS L A A+L ALR G V H +K+G ++N+LI +
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISM 420
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y++ +G++++A++ FD + ++N +S++
Sbjct: 421 YAR----------------------------------SGRIDDARKAFDILFEKNLISYN 446
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+I Y ++ + +FNE+ G + TF+S+L +AS+ ++ KG+ +H ++IK
Sbjct: 447 TVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS 506
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G + + AL Y++ G+IES+ +VF+ M D+N ISWT ++ G A+ G+A +++ LF
Sbjct: 507 GLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELF 566
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+M + + PN +T ++VL ACSH GLV++G K+F SM + + P HY C+VD+L R
Sbjct: 567 HKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGR 626
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
SG LSEA FINSMP++ D+ W + L C+ + N ++ + A K + + PA Y+LL
Sbjct: 627 SGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILL 686
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SN+YAS +W + N+RK M EK L K GCSWVEV N+VH F+ +PK
Sbjct: 687 SNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPK 738
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/578 (26%), Positives = 273/578 (47%), Gaps = 76/578 (13%)
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
DL + L + C+ + G L ++L + + V+ +LIS + K G+ E++
Sbjct: 65 DLQTYSLFLKKCIRTRSFDIGTLVH-EKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123
Query: 141 FE-RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ +++ISW+A + F N F AL F+ ++E+G PNE F++ +AC+
Sbjct: 124 FQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEF 183
Query: 200 FRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLK-MGEVDLARSVFDRMEKRDVVSWTVIL 257
+G S+FG + K G+ + V V LI + +K G++ A VF++M +R+ V+WT+++
Sbjct: 184 VSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMI 243
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
++ G Y EA LF +M ++P+
Sbjct: 244 TRLMQFG-------------------------------YAGEAIDLFLEMILSGYEPDRF 272
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC---GETKDGRLVF 374
S V+SA A+++ L G +H+ ++ G+ D + LI++Y+KC G R +F
Sbjct: 273 TLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIF 332
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D I++ + V SW +MI GY G +E E D
Sbjct: 333 DQILDHN---VFSWTAMITGYVQKGGYDE--EALD------------------------- 362
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F M+L+ IPN TFSS L A A++A+L G+ + +KLGF + +L
Sbjct: 363 ---LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YA+SG I+ +R+ FD + +KN IS+ ++ A++ ++E++ LF E+E + + T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
S+L + G + KG + ++ +K N ++ M SR G + A M
Sbjct: 480 FASLLSGAASIGTIGKG-EQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
+ + +W S+++G + A +A++ K+ EE
Sbjct: 539 E-DRNVISWTSIITG---FAKHGFATQALELFHKMLEE 572
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 206/472 (43%), Gaps = 79/472 (16%)
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
F N T + + NG +A+ ++ G P+ T+S K C F +G
Sbjct: 28 FTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTL 87
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMG 264
V + ++ + NSLI+L K G+ + A S+F M RD++SW+ ++ F
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFAN-- 145
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
N G+ A F M + PN CF+
Sbjct: 146 ---------------------------NNMGF--RALLTFVDMIENGYYPNEYCFAAATR 176
Query: 325 ALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A ++ + + G + V+K G ++ DV + LID++ K GR
Sbjct: 177 ACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVK------GR------------ 218
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
G + A ++F+ MP+RN V+W+ +I+ ++ +F EM+
Sbjct: 219 ---------------GDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMI 263
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK---SG 500
LSG P++ T S V+ A A++ L G+ LH + I+ G D +G L + YAK G
Sbjct: 264 LSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDG 323
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAE-SGYAKESINLFEEMEKTSITPNELTILSVL 559
+ ++R++FD++ D N SWT M+ G + GY +E+++LF M T + PN T S L
Sbjct: 324 SMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTL 383
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEA 607
AC++ + G + F + +K CV + M +RSGR+ +A
Sbjct: 384 KACANLAALRIGEQVFT-----HAVKLGFSSVNCVANSLISMYARSGRIDDA 430
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 69/281 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G + H +K G + L+ MY S + +A + L +L+ +N +I+A +
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK 454
Query: 100 WGNLEEAQRLFDGMPER---------------------------------------NEVS 120
N EEA LF+ + ++ N+
Sbjct: 455 NLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV 514
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
ALIS + + G +E + FE +NVISWT+ I GF ++GF+ +AL+LF K+LE GV
Sbjct: 515 CNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGV 574
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+PN VT+ ++ AC+ + G FK+ + +H
Sbjct: 575 RPNLVTYIAVLSACSHVGLVNEGWKH----FKSMYTEH---------------------G 609
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
V RME + ++D+ G L EA + + MP + +
Sbjct: 610 VIPRMEH-----YACMVDILGRSGSLSEAIQFINSMPYKAD 645
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 237/810 (29%), Positives = 371/810 (45%), Gaps = 153/810 (18%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E ++ S ++ C C + + G+ +H H+I++G + + T L+ MY+
Sbjct: 219 EITYLSILKACCCPVN-------LKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIE 271
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN---------------- 117
+A I + +++ MI +G +EA LF M
Sbjct: 272 DAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANA 331
Query: 118 ---EVSWT--------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
+ W AL+ + K G ++++ F+ +++ SWT
Sbjct: 332 SAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTV 391
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE------------------ 196
I G Q+G EA LFL++ +G PN T+ SI A A
Sbjct: 392 MIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEE 451
Query: 197 ---INDFRLGLSVFG------------LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
I+D R+G ++ L+F ++ V N+++ + G A +V
Sbjct: 452 AGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTV 511
Query: 242 FDRMEKR-------------------DVVSW--------------------TVILDVFIE 262
F +M++ D + W + + ++I
Sbjct: 512 FLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIR 571
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + +AR +FD++ R+ +W+ MI Q EA LF QM R F P+ + F +
Sbjct: 572 CGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINI 631
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LSA +AL VH+H G+ D+ + NAL+ YSKCG K
Sbjct: 632 LSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVK-------------- 676
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
AK++FD+M +RN +W+ +I G +H F+ F +M
Sbjct: 677 --------------------YAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQM 716
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L G +P+ +T+ S+L A AS +LE K++H + G D+ +G AL YAK G I
Sbjct: 717 LREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSI 776
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ +R VFD M +++ SWTVM+ GLA+ G E+++ F +M+ PN + ++VL AC
Sbjct: 777 DDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTAC 836
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH+GLVD+G + F SM Y I+P HYTC+VD+L R+G L EAE FI +MP EPD
Sbjct: 837 SHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAP 896
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LL C TY N ++AE A K KL + + YVLLSNIYA+ G+W + VR +M
Sbjct: 897 WGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQR 956
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
KG+RK G SW+EV N++H F +P+
Sbjct: 957 KGIRKEPGRSWIEVDNRIHSFVVGDTSHPE 986
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 231/447 (51%), Gaps = 67/447 (14%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E+N L+ +++ GR++ + F++ +N+ WT I G+ + G + +A++++ K
Sbjct: 150 EQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDK 209
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ + +PNE+T+ SI KAC + + G + I ++GF+ V V +L+ + +K G
Sbjct: 210 MRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGS 269
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
++ A+ +FD+M +R+V+SWT VMI
Sbjct: 270 IEDAQLIFDKMVERNVISWT-------------------------------VMIGGLAHY 298
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G +EAF LF QM R F PN+ + +L+A AS AL VH+H + G+ D+ +
Sbjct: 299 GRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVG 358
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NAL+ +Y+K G D R+VFD + E+D + SW MIGG +G+ +EA
Sbjct: 359 NALVHMYAKSGSIDDARVVFDGMTERD---IFSWTVMIGGLAQHGRGQEA---------- 405
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS--ASVASLEKGKD 472
F++F +M +G +PN +T+ S+L AS AS ++LE K
Sbjct: 406 ---------------------FSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKV 444
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+H + GF D+ +G AL YAK G I+ +R VFD M D++ ISW M+ GLA++G
Sbjct: 445 VHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGC 504
Query: 533 AKESINLFEEMEKTSITPNELTILSVL 559
E+ +F +M++ + P+ T LS+L
Sbjct: 505 GHEAFTVFLQMQQEGLVPDSTTYLSLL 531
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 226/466 (48%), Gaps = 71/466 (15%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+A+ + ++ G+ + ++ +I + C + D L V I K+G E+++ V N L
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL- 159
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
L V+I G L AR++FD++ ++N W+
Sbjct: 160 ------------------------------LRVYIRCGRLQCARQVFDKLLKKNIYIWTT 189
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MI Y + G+ E+A R++ +M + +PN + +L A L+ G +HAH+++ G
Sbjct: 190 MIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSG 249
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ DV + AL+++Y KCG +D +L+FD +VE++ V+SW MIGG G+ +EA
Sbjct: 250 FQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERN---VISWTVMIGGLAHYGRGQEA-- 304
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
F +F +M G IPN T+ S+L A+AS +
Sbjct: 305 -----------------------------FHLFLQMQREGFIPNSYTYVSILNANASAGA 335
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
LE K++H + G D+ +G AL YAKSG I+ +R VFD M +++ SWTVM+ G
Sbjct: 336 LEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGG 395
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFA---CSHSGLVDKGLKYFNSMEPIYN 583
LA+ G +E+ +LF +M++ PN T LS+L A S S L + +K +
Sbjct: 396 LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSAL--EWVKVVHKHAEEAG 453
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ R ++ M ++ G + +A + M + D +W +++ G
Sbjct: 454 FISDLRIGNALIHMYAKCGSIDDARLVFDGMC-DRDVISWNAMMGG 498
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 155/303 (51%), Gaps = 36/303 (11%)
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VH ++K G+E++++++N L+ +Y +CG
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCG------------------------------- 167
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
+++ A+++FD + K+N W+ +I GY E+ + V+++M PN+ T+ S
Sbjct: 168 ---RLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLS 224
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+L A +L+ GK +H II+ GF DV + TAL + Y K G IE ++ +FD+M ++N
Sbjct: 225 ILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERN 284
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
ISWTVM+ GLA G +E+ +LF +M++ PN T +S+L A + +G ++ +K +
Sbjct: 285 VISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE-WVKEVH 343
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
S + + R +V M ++SG + +A + M E D +W ++ G +
Sbjct: 344 SHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMT-ERDIFSWTVMIGGLAQHGRG 402
Query: 637 QIA 639
Q A
Sbjct: 403 QEA 405
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 225/709 (31%), Positives = 343/709 (48%), Gaps = 114/709 (16%)
Query: 83 NGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEV-SWTALISGFMKHGRVEESMW 139
GFD + N ++++ I G L +A+ LFD MP RN S ++SG+ + G++ +
Sbjct: 28 TGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHH 87
Query: 140 YFERNP--FQNVISWTAAICGFVQ--NGFSFEALKLFLKLLESGVKPNEVTFSSICK--- 192
F +P ++ ++WT I F + +A+ LF +L GV P+ VT +++
Sbjct: 88 LFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPP 147
Query: 193 ACAEINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
A + S+ K G +V VCN+L+ K G + AR VF M RD V
Sbjct: 148 ASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSV 207
Query: 252 SWTVI-------------LDVFIEM----------------------GDLGEARRI---- 272
++ + LD+F M GDL R++
Sbjct: 208 TYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLV 267
Query: 273 ------------------------------FDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
F EM ER+ VS++VMIA Y + R
Sbjct: 268 ARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLR 327
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR+M SF ++ +LS S+ + G +HA ++ +G+ + + NALID+YS
Sbjct: 328 LFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYS 387
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG + F + K+ VSW +MI G NGQ EEA +LF M +
Sbjct: 388 KCGMLDAAKTNF---INKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRR--------- 435
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+G P+++TFSS + AS+++A + G+ LH +I+ G
Sbjct: 436 ----------------------AGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGH 473
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
VF G+AL D Y K G ++ + + FD MP++N ISW ++ A G AK +I +FE
Sbjct: 474 MSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEG 533
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M P+ +T LSVL ACSH+GL ++ +KYF ME Y I P HY+CV+D L R G
Sbjct: 534 MLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVG 593
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
R + ++ + MPFE D W+S+L C+T+ N+ +A A + L+ + YV+LSN
Sbjct: 594 RFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSN 653
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
I+A AG+W DA V+K+M ++GLRK G SWVEV+++V+ F NP
Sbjct: 654 IFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNP 702
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 190/434 (43%), Gaps = 54/434 (12%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD-VVSWTVILDVFIEMGDLGE 268
+ K GF+ N L+ + G + AR++FD+M R+ S +L + G L
Sbjct: 25 MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSA 84
Query: 269 ARRIFDEMPE--RNEVSWSVMIARYNQS--GYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
A +F P R+ V+W+VMI + + +A LFR M R P+ + VL+
Sbjct: 85 AHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLN 144
Query: 325 ALASLKALRSGM---HVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+ + + +H LK+G+ +V + N L+D Y K
Sbjct: 145 LPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCK----------------- 187
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+G + A+ +F MP R+ V+++A++ G + +F
Sbjct: 188 -----------------HGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFA 230
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M G + TFS+VL + V L G+ +HG ++ +VF+ +L D Y+K
Sbjct: 231 AMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHG-LVARATSSNVFVNNSLLDFYSKCD 289
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL---TILS 557
++ +++F M +++ +S+ VM+ G A + A + LF EM+ S L ++LS
Sbjct: 290 CLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLS 349
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE-DFINSMPF 616
V + H G+ K ++ + + ++DM S+ G L A+ +FIN
Sbjct: 350 VAGSVPHIGIG----KQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN-- 403
Query: 617 EPDSNAWASLLSGC 630
+ +W ++++GC
Sbjct: 404 DKTGVSWTAMITGC 417
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 62/305 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH +LI++G + + LL MY +
Sbjct: 461 GRQLHSYLIRSGHMSSVFSGSALLDMY-------------------------------TK 489
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER------NPFQNVISWT 153
G L+EA + FD MPERN +SW A+IS + +G+ + ++ FE P + +++
Sbjct: 490 CGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKP--DSVTFL 547
Query: 154 AAICGFVQNGFSFEALKLF-LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
+ + NG + E +K F L E G+ P + +S + + F V ++ +
Sbjct: 548 SVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFD---KVQEMLGE 604
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDR---MEKRDVVSWTVILDVFIEMG---DL 266
FE + +S++ G DLAR ++ M D + ++ ++F + G D
Sbjct: 605 MPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDA 664
Query: 267 GEARRIFDEMPERNEVSWSVMIARY-------NQSGYP------EEAFRLFRQMTRYSFK 313
++I + R E +S + ++ N P +E RL+++M + +K
Sbjct: 665 AGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYK 724
Query: 314 PNTSC 318
P+TSC
Sbjct: 725 PDTSC 729
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/604 (32%), Positives = 315/604 (52%), Gaps = 55/604 (9%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+K GR+ +++ F+R P +NV++WT+ + G +NG AL +F ++ESGV PN+
Sbjct: 58 LVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFAC 117
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
++ ACA++ R G V L +AGF + + LI + + G + A+ VFDRM+
Sbjct: 118 NAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS 177
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
DVV +T ++ F G+ E++ +I QM
Sbjct: 178 PDVVGYTSLISAFCRNGEF--------------ELAAEALI-----------------QM 206
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL-KIGIE-KDVFISNALIDLYSK-- 363
+ KPN + +L+A + G +H +++ KIG+ + V+ S ALID YS+
Sbjct: 207 LKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNE 262
Query: 364 ---------------CGETKDGRLVFDSIVEKD-VAHVVSWNSMIGGYGLNGQMEEAKEL 407
CG GR + S ++ D + + N+++ YG G +EE + +
Sbjct: 263 GVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAM 322
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
+ + + VSW+ IS ++ + A+ +M G PN FSSVL + A VASL
Sbjct: 323 LNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASL 382
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++G H +KLG ++ G AL + Y+K G + S+R FD M + SW ++ G
Sbjct: 383 DQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGH 442
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A+ G A +++ +F +M I P++ T L VL C+HSG+V++G +F M Y+ P
Sbjct: 443 AQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPA 502
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C++DML R+GR EA IN MPFEPD+ W +LL+ CK ++N I + A L
Sbjct: 503 PSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLM 562
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L++ A YVL+SNIYA G W DA VR+ M E G++K GCSW+E+ N+VH F +
Sbjct: 563 ELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRD 622
Query: 708 DHNP 711
+P
Sbjct: 623 MSHP 626
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 30/406 (7%)
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
E DVV L+ ++ G L +A +FD MP +N V+W+ +++ ++G PE A +F
Sbjct: 44 ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFA 103
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M PN + L A A L ALR+G VH+ ++ G D +I + LI++YS+CG
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCG 163
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSA 421
+ VFD + D VV + S+I + NG+ E A E M K+ N+ + +
Sbjct: 164 SLPAAKEVFDRMDSPD---VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTT 220
Query: 422 I-----------ISGYLEHKQFDLVFAVFNEMLL-------SGEIPNKSTFSSVLCASAS 463
I I GYL K +V++ L G PN+ S VL A S
Sbjct: 221 ILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGS 280
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
+ G+ LH IK D+ + AL Y ++G +E + +++ + + +SWT
Sbjct: 281 IG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 337
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ ++G+ +++I L +M TPN SVL +C+ +D+G++ F+ +
Sbjct: 338 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLG 396
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+++M S+ G++ A + M D +W SL+ G
Sbjct: 397 CDSEICTGNALINMYSKCGQMGSARLAFDVM-HTHDVTSWNSLIHG 441
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 193/428 (45%), Gaps = 63/428 (14%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ LI + + G + + F+R +V+ +T+ I F +NG A + +++L+ G+K
Sbjct: 153 SCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLK 212
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFG-LIFKAGFE-KHVSVCNSLI------------- 226
PNE T ++I AC + LG + G LI K G + V +LI
Sbjct: 213 PNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNE 268
Query: 227 -TLSLKM---GEVDLARSVFDRMEKRDVVS----WTVILDVFIEMGDLGEARRIFDEMPE 278
LS+ + G + L R + K D+++ +L ++ G + E + +++
Sbjct: 269 FALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIEN 328
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+ VSW+ I+ Q+G+ E+A L QM F PN FS VLS+ A + +L GM
Sbjct: 329 PDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF 388
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H LK+G + ++ NALI++YSKCG+ RL FD + D V SWNS+I G+ +
Sbjct: 389 HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHD---VTSWNSLIHGHAQH 445
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G +A E VF++M +G P+ STF VL
Sbjct: 446 GDANKALE-------------------------------VFSKMRSNGIKPDDSTFLGVL 474
Query: 459 CASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKN 516
+E+G+ +I + F + D ++G + + R+ + MP + +
Sbjct: 475 MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 534
Query: 517 EISWTVMV 524
+ W ++
Sbjct: 535 ALIWKTLL 542
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 191/429 (44%), Gaps = 40/429 (9%)
Query: 38 IQGRALHGHLIK-TGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
+ G+ +HG+LIK G+ + ++ LI + + ++ NE +V+ C
Sbjct: 228 VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFA-----LSIVLGAC---G 279
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+I G + + VS AL+S + + G VEE + +++SWT AI
Sbjct: 280 SIGLGRQLHCSAIKHDLITDIRVS-NALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAI 338
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
QNGF +A+ L ++ G PN FSS+ +CA++ G+ L K G +
Sbjct: 339 SANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCD 398
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ N+LI + K G++ AR FD M DV SW ++ + GD +A +F +M
Sbjct: 399 SEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 458
Query: 277 P----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKA 331
+ ++ ++ ++ N SG EE FR M +YSF P S ++ ++ L
Sbjct: 459 RSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLG---- 514
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALI--DLYSKCGETKD---GRLVFDSIVEKDVAHVV 386
R+G A L++ I F +ALI L + C ++ G+L D ++E
Sbjct: 515 -RNGRFDEA--LRM-INDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSA 570
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNM-----PKRNDVSWSAI-------ISGYLEHKQFDL 434
S+ M Y ++G+ E+A+++ M K SW I S + H D
Sbjct: 571 SYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDS 630
Query: 435 VFAVFNEML 443
++ + E++
Sbjct: 631 IYQMLGELV 639
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 209/712 (29%), Positives = 355/712 (49%), Gaps = 105/712 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H + G+ + L +L+ MY+ ++ I + + + N +++ +
Sbjct: 76 GKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAK 135
Query: 100 WGNLEEAQRLFDGMPE----RNEVSWTALISGF--------------------------- 128
GN E+ LF+ M E + ++T ++ GF
Sbjct: 136 IGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAV 195
Query: 129 --------MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
K G VE + F+ ++V+SW + I G NGFS L+ F+++L GV
Sbjct: 196 VNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGV 255
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ T ++ ACA + + LG ++ KAGF V N+L
Sbjct: 256 DVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTL--------------- 300
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
LD++ + G+L A +F +M E VSW+ +IA + + G EA
Sbjct: 301 ----------------LDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEA 344
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF +M +P+ + V+ A A +L G VH H+ K + ++ +SNAL+++
Sbjct: 345 IGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNM 404
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG MEEA +F +P +N VSW+
Sbjct: 405 YAKCG----------------------------------SMEEANLIFSQLPVKNIVSWN 430
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+I GY ++ + +F +M + P+ T + VL A A +A+LEKG+++HG I++
Sbjct: 431 TMIGGYSQNSLPNEALQLFLDMQKQLK-PDDVTMACVLPACAGLAALEKGREIHGHILRK 489
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G+ D+ + AL D Y K G + ++++FD +P K+ I WTVM+ G G+ KE+I+ F
Sbjct: 490 GYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTF 549
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
E+M I P E + S+L+AC+HSGL+ +G K F+SM+ NI+P HY C+VD+L R
Sbjct: 550 EKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIR 609
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
SG LS A FI +MP +PD+ W +LLSGC+ + + ++AE+ +++++L E+ YVLL
Sbjct: 610 SGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLL 669
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+N+YA A +W + +++ +++ GL+ GCSW+EV+ + + FF +P+
Sbjct: 670 ANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQ 721
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 180/478 (37%), Gaps = 150/478 (31%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+ S + C C N + +GR +H H+ K +
Sbjct: 362 AVTSVVHACAC-------SNSLDKGREVHNHIKKNNM----------------------- 391
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
G +L V N ++N + G++EEA +F +P +N VSW +I
Sbjct: 392 --------GSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIG--------- 434
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
G+ QN EAL+LFL ++ +KP++VT + + ACA
Sbjct: 435 ----------------------GYSQNSLPNEALQLFLD-MQKQLKPDDVTMACVLPACA 471
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ G + G I + G+ + V +L+ + +K G + LA+ +FD + K+D++ WT
Sbjct: 472 GLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWT- 530
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
VMIA Y G+ +EA F +M +P
Sbjct: 531 ------------------------------VMIAGYGMHGFGKEAISTFEKMRVAGIEPE 560
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
S F+ +L A H+ +L K+G +FD
Sbjct: 561 ESSFTSILYAC-----------THSGLL------------------------KEGWKLFD 585
Query: 376 SI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYLEH 429
S+ +E + H + M+ +G + A + + MP + D + W A++SG H
Sbjct: 586 SMKSECNIEPKLEH---YACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIH 642
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS--ASVASLEKGKDLHGKIIKLGFPYD 485
+L V + E+ ++T VL A+ A E+ K + +I K G D
Sbjct: 643 HDVELAEKVAEHIF---ELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKND 697
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 205/712 (28%), Positives = 341/712 (47%), Gaps = 104/712 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H IK G + ++ + L+ +Y + + A + + + V N ++N Q
Sbjct: 248 GKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQ 307
Query: 100 WGNLEEAQRLFDGMP---------------------------------------ERNEVS 120
G+ E+ LF M E +E
Sbjct: 308 MGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFI 367
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
L+ + K G +++ F R +V+SW+A I Q G S EA ++F ++ SGV
Sbjct: 368 SCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGV 427
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
PN+ T +S+ A ++ D G S+ + K GFE +VCN+L+T+ +K+G V
Sbjct: 428 IPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQ---- 483
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ R+F+ R+ +SW+ +++ ++ + +
Sbjct: 484 ---------------------------DGCRVFEATTNRDLISWNALLSGFHDNETCDTG 516
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
R+F QM F PN F +L + +SL + G VHA ++K ++ + F+ AL+D+
Sbjct: 517 LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDM 576
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+K N +E+A+ +F+ + KR+ +W+
Sbjct: 577 YAK----------------------------------NRFLEDAETIFNRLIKRDLFAWT 602
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
I++GY + Q + F +M G PN+ T +S L + +A+L+ G+ LH IK
Sbjct: 603 VIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA 662
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G D+F+ +AL D YAK G +E + VFD + ++ +SW ++ G ++ G +++ F
Sbjct: 663 GQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAF 722
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
E M P+E+T + VL ACSH GL+++G K+FNS+ IY I P HY C+VD+L R
Sbjct: 723 EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 782
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G+ E E FI M + W ++L CK + N + ERA L++L E + Y+LL
Sbjct: 783 AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILL 842
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SN++A+ G W D NVR LM+ +G++K GCSWVEV QVH F +PK
Sbjct: 843 SNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPK 894
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 169/605 (27%), Positives = 271/605 (44%), Gaps = 80/605 (13%)
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
L + ++ C ++ G Q + G+ + + W +L++ + K G + F
Sbjct: 128 LRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHL-WNSLVNVYAKCGSANYACKVF 186
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
P ++V+SWTA I GFV G+ A+ LF ++ GV+ NE T+++ KAC+ D
Sbjct: 187 GEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLE 246
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V K G + V ++L+ L K GE+ LA VF M K++ VSW +L+ F
Sbjct: 247 FGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFA 306
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+MGD E+ LF +MT + S
Sbjct: 307 QMGD-------------------------------AEKVLNLFCRMTGSEINFSKFTLST 335
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VL A+ LR+G VH+ ++IG E D FIS L+D+YSKCG D VF I + D
Sbjct: 336 VLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPD 395
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
VVSW+++I GQ EA E VF
Sbjct: 396 ---VVSWSAIITCLDQKGQSREAAE-------------------------------VFKR 421
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M SG IPN+ T +S++ A+ + L G+ +H + K GF YD + AL Y K G
Sbjct: 422 MRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGS 481
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ RVF+ +++ ISW ++ G ++ + +F +M PN T +S+L +
Sbjct: 482 VQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRS 541
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CS VD G K ++ ++ N T +VDM +++ L +AE N + + D
Sbjct: 542 CSSLSDVDLG-KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLF 599
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLSNIYA-------SAGRWID 672
AW +++G Y + E+AVK ++ E P + L S++ +GR +
Sbjct: 600 AWTVIVAG---YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH 656
Query: 673 AMNVR 677
+M ++
Sbjct: 657 SMAIK 661
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 208/651 (31%), Positives = 324/651 (49%), Gaps = 70/651 (10%)
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
+IMY+ +S + D F V+ C I +I G A + + S
Sbjct: 245 IIMYIQMTRSGQ----FPDQLTFGSVIKACYIAGDIDLGRQLHAH-VIKSWFGHHLTSQN 299
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV-K 181
ALIS + G++E + F R P +++ISW I G++Q G+ EAL LF LL G +
Sbjct: 300 ALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQ 359
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PNE F S+ AC+ + + G V G+ K G
Sbjct: 360 PNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGL-------------------------- 393
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
+R+V + + D++ + G L A+ F ++ + VSW+ +IA + +G EA
Sbjct: 394 -----RRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAI 448
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
FRQM P++ + +L S L G +H++++KIG +K++ + N+L+ +Y
Sbjct: 449 DFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMY 508
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KC D VF +D++ N VSW+A
Sbjct: 509 TKCSHLHDALNVF-----RDISR----------------------------NANLVSWNA 535
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
I+S L+ KQ F ++ EM SG P+ T +++L A + SL G +H IK G
Sbjct: 536 ILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSG 595
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV + L D YAK G ++ +R VFD + + +SW+ ++ G A+ G E++NLF
Sbjct: 596 LILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFR 655
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M + PNE+T L L ACSH GLV++G + + SME + I P H++C+VD+L+R+
Sbjct: 656 IMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARA 715
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L EAE FI + D AW +LL+ CKT+ N IAER N+ KL + A V+L
Sbjct: 716 GCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLC 775
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NI+ASAG W + +RKLM + G++K G SW+EV+++ H FF + +P+
Sbjct: 776 NIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQ 826
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 147/577 (25%), Positives = 270/577 (46%), Gaps = 93/577 (16%)
Query: 70 RKSLEANEI-VKDLNG-FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE----VSWTA 123
+++LEA + +K+ N F+ + ++ A + +L+ A+++ D + + N +
Sbjct: 140 KEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNH 199
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+I+ + K G ++++ F+ NV+SWT+ I G+ QNG + +A+ +++++ SG P+
Sbjct: 200 MINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPD 259
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++TF S+ KAC D LG + + K+ F H++ N+LI++ G+++ A +VF
Sbjct: 260 QLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFT 319
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
R+ +D++SW ++ +I++ GY EA L
Sbjct: 320 RIPTKDLISWGTMITGYIQL-------------------------------GYRVEALYL 348
Query: 304 FRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
FR + R +++PN F V SA +SL L G VH +K G+ ++VF +L D+Y+
Sbjct: 349 FRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYA 408
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
K G ++ F I D +VSWN++I + NG EA +
Sbjct: 409 KFGFLPSAKMAFCQIKNPD---IVSWNAIIAAFADNGDANEAIDF--------------- 450
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
F +M+ G P+ T+ S+LC S L +G+ +H I+K+GF
Sbjct: 451 ----------------FRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGF 494
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVF-DRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++ + +L Y K + + VF D + N +SW ++ + E+ L++
Sbjct: 495 DKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYK 554
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP---------NGRHYT 592
EM + P+ +TI ++L C+ L G+ + Y+IK NG
Sbjct: 555 EMHFSGNKPDSITITTLLGTCAE--LTSLGV---GNQVHCYSIKSGLILDVSVCNG---- 605
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++DM ++ G L A D +S D +W+SL+ G
Sbjct: 606 -LIDMYAKCGSLKHARDVFDSTQ-NLDIVSWSSLIVG 640
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 199/433 (45%), Gaps = 42/433 (9%)
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM----GDLGEARRIFDE 275
S SL+ +D A+ + D + K + ++ + I M G + +AR++FD
Sbjct: 160 STYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDT 219
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
M N VSW+ MI+ Y+Q+G +A ++ QMTR P+ F V+ A + G
Sbjct: 220 MQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLG 279
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+HAHV+K + NALI +Y+ G+ + VF I KD ++SW +MI GY
Sbjct: 280 RQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKD---LISWGTMITGY 336
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G EA LF ++ ++ PN+ F
Sbjct: 337 IQLGYRVEALYLFRDLLRQGTYQ------------------------------PNEFIFG 366
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
SV A +S+ LE GK +HG +K G +VF G +L D YAK G + S++ F ++ +
Sbjct: 367 SVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNP 426
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ +SW ++ A++G A E+I+ F +M +TP+ +T +S+L C +++G +
Sbjct: 427 DIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIH 486
Query: 576 NSMEPIYNIKPNGRHYTC--VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ I I + C ++ M ++ L +A + + + +W ++LS C
Sbjct: 487 SY---IVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQK 543
Query: 634 KNEQIAERAVKNL 646
K E R K +
Sbjct: 544 KQEGETFRLYKEM 556
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 192/457 (42%), Gaps = 86/457 (18%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+ +F S I+ C + DI GR LH H+IK+ L+ MY +
Sbjct: 260 QLTFGSVIKACY-IAGDID------LGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIE 312
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF-----DGMPERNEVSWTALISGF 128
A+ + + DL+ MI IQ G EA LF G + NE + ++ S
Sbjct: 313 HASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSAC 372
Query: 129 -----MKHGRVEESM---WYFERNPFQ---------------------------NVISWT 153
+++G+ M + RN F +++SW
Sbjct: 373 SSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWN 432
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
A I F NG + EA+ F +++ G+ P+ +T+ S+ C G + I K
Sbjct: 433 AIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKI 492
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVF-DRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
GF+K ++VCNSL+T+ K + A +VF D ++VSW IL ++ GE
Sbjct: 493 GFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGE---- 548
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
FRL+++M KP++ + +L A L +L
Sbjct: 549 ---------------------------TFRLYKEMHFSGNKPDSITITTLLGTCAELTSL 581
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G VH + +K G+ DV + N LID+Y+KCG K R VFDS D +VSW+S+I
Sbjct: 582 GVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLD---IVSWSSLI 638
Query: 393 GGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISG 425
GY G EA LF M + N+V++ +S
Sbjct: 639 VGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSA 675
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 302/523 (57%), Gaps = 8/523 (1%)
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
MP + SW +++G+ K G + ++ F+ P ++ +SWT I G+ Q G A+K+F
Sbjct: 1 MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMF 60
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
+ +++ V P + T +++ +CA + +G + + K G V V NSL+ + K
Sbjct: 61 VAMMKDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKA 120
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
G+ +A+ VFDRM R + SW +++ + + G A F++M ER+ V+W+ MI Y+
Sbjct: 121 GDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYS 180
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
Q G+ +EA LF +M S KP+ + +LSA A+++ L G +H+++++ +
Sbjct: 181 QHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGV 240
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVA---HVVSWNSMIGGYGLNGQMEEAKELFD 409
+ NALI +Y+K G G + SIVE+ +V+++ +++ GY G + A+ +FD
Sbjct: 241 VQNALISMYAKTG----GVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFD 296
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
++ + V+W+A+I GY+++ D +F M G PN T +++L S++VASL
Sbjct: 297 SLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNH 356
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLA 528
GK +H I+ G V +G AL YAK+G I +++VF+ + +K+ +SWT M+ L
Sbjct: 357 GKQIHASAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALG 416
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
+ G +ESI LFE+M I P+ +T + VL AC+H GLV++G YFN M I+ I+P
Sbjct: 417 QHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTL 476
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
HY C++D+ R+G L EA FI +MP EPD AW SLLS CK
Sbjct: 477 SHYACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSCK 519
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 248/483 (51%), Gaps = 52/483 (10%)
Query: 54 KERYLTTRLLIM-YLGSRKSLEANEIVKDLNGFDL--------VVHNCMINANIQWGNLE 104
K++ L T+ + S +L A +I K ++ F + V N ++N + G+
Sbjct: 65 KDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSV 124
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
A+ +FD M R+ SW +IS M GR + ++ FE+ ++V++W + I G+ Q+GF
Sbjct: 125 MAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGF 184
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
EAL+LF ++LE +KP+ T +SI ACA I + LG + I + F+ V N+
Sbjct: 185 DKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNA 244
Query: 225 LITLSLKMGEVDLARSVFDR--MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
LI++ K G V++A+S+ ++ + +V+++T +LD ++++G++ AR IFD + + + V
Sbjct: 245 LISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVV 304
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+W+ MI Y Q+G ++A LFR M + +PN+ + +LS +++ +L G +HA
Sbjct: 305 AWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASA 364
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE-KDVAHVVSWNSMIGGYGLNGQM 401
++ G V + NALI +Y+K G D + VF+ I KD VSW SMI G +G
Sbjct: 365 IRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKD---TVSWTSMIIALGQHGLG 421
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+E+ ELF+ +ML G P+ T+ VL A
Sbjct: 422 QESIELFE-------------------------------KMLALGIKPDHITYVGVLSAC 450
Query: 462 ASVASLEKGK---DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNE 517
V +E+G+ +L I K+ + + D + ++G ++ + + MP + +
Sbjct: 451 THVGLVEQGRGYFNLMTSIHKIEPTLSHY--ACMIDLFGRAGLLQEAFSFIENMPIEPDV 508
Query: 518 ISW 520
I+W
Sbjct: 509 IAW 511
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 213/732 (29%), Positives = 376/732 (51%), Gaps = 77/732 (10%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK-- 80
T L +L +S V +GRALH + + ++ + L+ MY ++A + +
Sbjct: 9 TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLF--------------------------DGMP 114
D ++V N MI A Q G+ EA L+ G
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQGRE 128
Query: 115 ERNEVSWT----------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
N V ++ AL++ + + G V ++ F+ ++ SW A I Q+G
Sbjct: 129 IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGD 188
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
AL++F K ++ +KPN T+ ++ + G + I GF+
Sbjct: 189 WSGALRIF-KEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS------- 240
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
D+V T +++++ + G EAR +FD+M +R+ VSW
Sbjct: 241 ------------------------DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSW 276
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+VMI Y Q+G EA L++++ FK + F +L A +S+KAL G VH+H+L+
Sbjct: 277 NVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE 336
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG---QM 401
G++ +V ++ AL+++Y+KCG ++ R VF+++ +D V+W+++IG Y NG
Sbjct: 337 RGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDA---VAWSTLIGAYASNGYGKDA 393
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCA 460
+A+++FD + R+ + W+A+I+ Y+++ +F EM +G P+ TF +VL A
Sbjct: 394 RKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEA 453
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
AS+ L + K LH +I + +V + L + YA+ G +E + R+F +K +SW
Sbjct: 454 CASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSW 513
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T MV ++ G E+++LF+EM+ + P+++T S+LF C+H G +++G +YF M
Sbjct: 514 TAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAE 573
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
++ + P H+ +VD+L RSGRL +A++ + SMPFEPD AW + L+ C+ + ++ E
Sbjct: 574 LHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGE 633
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
A + +++L A Y+ +SNIYA+ G W +VRK M E+GL+K G S++EV ++
Sbjct: 634 AAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKL 693
Query: 701 HFFFQKTDHNPK 712
H F ++P+
Sbjct: 694 HEFSSGGKYHPR 705
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/585 (23%), Positives = 264/585 (45%), Gaps = 125/585 (21%)
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P+ VTF ++ +C+ D G ++ I + FE+ V N+LI++ K + ARS
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 241 VFDRME--KRDVVSWTVILDVFIEMGDLGEARRIFDEMPER------------------- 279
VF+ M+ +R+VVSW ++ + + G EA ++ M +
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 280 -------NEVSWS----------VMIARYNQSGYPEEAFRLFRQMT-------------- 308
N V +S ++ Y + G +A R+F+ +
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH 183
Query: 309 ----------------RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+ KPN++ + V+S ++ + L G +HA ++ G + D+
Sbjct: 184 SQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLV 243
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
++ ALI++Y KCG + + R VFD + ++D +VSWN MIG Y NG EA EL+ +
Sbjct: 244 VATALINMYGKCGSSHEAREVFDKMKKRD---MVSWNVMIGCYVQNGDFHEALELYQKLD 300
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
+ G K+TF S+L A +SV +L +G+
Sbjct: 301 -------------------------------MEGFKRTKATFVSILGACSSVKALAQGRL 329
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+H I++ G +V + TAL + YAK G +E +R+VF+ M +++ ++W+ ++ A +GY
Sbjct: 330 VHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGY 389
Query: 533 ---AKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
A+++ +F+ + + +I N + V C+ + +K F M +KP+
Sbjct: 390 GKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVA-----AMKIFREMTGAAGLKPDA 444
Query: 589 RHYTCVVDMLSRSGRLSEAEDF---INSMPFEPD---SNAWASLLSGCKTYKNEQIAERA 642
+ V++ + GRLSE + I+ E + +N ++ + C + + AER
Sbjct: 445 VTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEE---AER- 500
Query: 643 VKNLWKLAEEHP-AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L+ A+E + + ++ GR+ +A+++ + M +G++
Sbjct: 501 ---LFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 297/525 (56%), Gaps = 38/525 (7%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N L+ L K G++ A+++FD+M KRD+ SW +L + + G + + FD MP R+ V
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
S++ IA ++ + P+E+ LF++M R F+P +L+A A L LR G +H +
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSI 181
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+ +VFI NAL D+Y+KCGE + R +FD + +K++ VSWN MI GY NGQ E
Sbjct: 182 IVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNL---VSWNLMISGYAKNGQPE 238
Query: 403 -----------------------------------EAKELFDNMPKRNDVSWSAIISGYL 427
EA+ +F +++ V W+A++ GY
Sbjct: 239 KCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYA 298
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
++ + + +FNEMLL P+ T SSV+ + A +ASL G+ +HGK I G ++
Sbjct: 299 KNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLL 358
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ +AL D Y+K G I+ +R VF+ MP +N +SW M+ G A++G+ K+++ LFE M +
Sbjct: 359 VSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQK 418
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
P+ +T + +L AC H +++G +YF+S+ + + P HY C+V++L R+GR+ +A
Sbjct: 419 FKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQA 478
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
I +M +PD W++LLS C T + AE A ++L++L Y++LSN+YAS
Sbjct: 479 VALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASM 538
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
GRW D +VR LM K ++K G SW+E+ N+VH F + +P+
Sbjct: 539 GRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPE 583
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 234/472 (49%), Gaps = 50/472 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D +HN +++ ++G L +AQ LFD M +R+ SW AL+S + K G ++ F+R P
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
F++ +S+ I GF N E+L+LF ++ G +P E T SI A A+++D R G
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW------------ 253
+ G I F +V + N+L + K GE++ AR +FD + K+++VSW
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236
Query: 254 -----------------------TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ I+ + + G + EARR+F E E++ V W+ M+
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVG 296
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y ++G E+A LF +M +P++ S V+S+ A L +L G VH + G+ +
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+ +S+ALID+YSKCG D R VF+ + ++ VVSWN+MI G NG ++A ELF+N
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRN---VVSWNAMIVGCAQNGHDKDALELFEN 413
Query: 411 MP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVA 465
M K ++V++ I+S L + F+ + G P ++ ++
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTG 473
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI----ESSRRVFDRMP 513
+E+ L I + D + + L + GDI ++R +F+ P
Sbjct: 474 RIEQAVAL---IKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDP 522
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF-PYDVFLGTALTDTYAKS 499
++L S ++ ++ + + K L + F P D FL L YAK
Sbjct: 12 DLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKF 71
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESG---------------------------- 531
G + ++ +FD+M ++ SW ++ A+SG
Sbjct: 72 GKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFS 131
Query: 532 ---YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
+ES+ LF+ M++ P E TI+S+L A + + G + S+ + N N
Sbjct: 132 GNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSI-IVRNFLGNV 190
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
+ + DM ++ G + +A + + + + +W ++SG Y E+ + L +
Sbjct: 191 FIWNALTDMYAKCGEIEQARWLFDCLT-KKNLVSWNLMISG---YAKNGQPEKCIGLLHQ 246
Query: 649 LA-EEHPAGYVLLSNI---YASAGRWIDAMNVRKLMTEKGL 685
+ H V +S I Y GR +A V EK +
Sbjct: 247 MRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDI 287
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 201/690 (29%), Positives = 345/690 (50%), Gaps = 99/690 (14%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + +Q G+L A++LFD MP +N S +I G++K G + E+ F+ + +
Sbjct: 105 NFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAV 164
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+WT I G+ QN EA LF+++ G+ P+ V+ +++ E + V +
Sbjct: 165 TWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHV 224
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K G++ + V NSL LD + + LG A
Sbjct: 225 IKLGYDSTLVVSNSL-------------------------------LDSYCKTRSLGLAF 253
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
++F+++PER+ V+++ ++ Y++ G+ EA LF +M ++P F+ +L+A L
Sbjct: 254 QLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLD 313
Query: 331 ALRSGMHVHAHVLKIGIEKDVFIS-------------------------------NALID 359
+ G VH V+K +VF++ N L+
Sbjct: 314 DIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVT 373
Query: 360 LYSKCGETKDGRLVF------------------------------------DSIVEKDVA 383
Y+ G K+ +F +IV ++
Sbjct: 374 CYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAIS 433
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
++ NS++ Y G+ EA +F ++ ++ V W+A+IS Y++ + +F EM
Sbjct: 434 EILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQ 493
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+ + +T++S++ A AS+ASL GK LH II G+ +VF G+AL D YAK G I+
Sbjct: 494 RAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIK 553
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ ++F MP +N +SW ++ A++G ++ LFEEM ++ + P+ +++LS+L ACS
Sbjct: 554 DALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACS 613
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H GLV++GL+YF+SM IY + P HY +DML R GR EAE + MPFEPD W
Sbjct: 614 HCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMW 673
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKL-AEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
+S+L+ C +KN+++A++A L+ + A YV +SNIYA+AG W + V+K M E
Sbjct: 674 SSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRE 733
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G++K SWVE++++ H F +P+
Sbjct: 734 RGVKKVPAYSWVEIKHKTHVFTANDKTHPQ 763
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 207/687 (30%), Positives = 348/687 (50%), Gaps = 98/687 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK ++ + G++LH IK+ I Y + +++Y
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLY-------------------- 53
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G L A++ F + + N S+ A+I+ + K R + F++ P
Sbjct: 54 -----------SKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPE 102
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+++S+ I + G + AL LF + E G+ + T S++ AC + D L +
Sbjct: 103 PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCD--DVGLIGQL 160
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ +GF+ +VSV N+L+T K G++D A+ V F MG +
Sbjct: 161 HSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV------------------FYGMGGI 202
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
R+EVSW+ MI Y Q +A LF++M R + + VL+A
Sbjct: 203 ------------RDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
L+ L G+ H ++K G ++ + + LIDLYSKCG
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG--------------------- 289
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF-DLVFAVFNEMLLS 445
G M + +++F+ + + + V W+ ++SGY ++++F + F +M
Sbjct: 290 ------------GGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI 337
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-VFLGTALTDTYAKSGDIES 504
G PN +F V+ A ++++S +GK +H +K P + + + AL Y+K G+++
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+RR+FDRM + N +S M+ G A+ G ES++LF+ M + I P +T +SVL AC+H
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAH 457
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+G V++G YFN M+ +NI+P HY+C++D+L R+G+LSEAE+ I MPF P S WA
Sbjct: 458 TGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWA 517
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
SLL C+T+ N ++A +A + +L + A YV+LSN+YASAGRW + VRK M ++G
Sbjct: 518 SLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRG 577
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++K GCSW+EV+ ++H F + +P
Sbjct: 578 VKKKPGCSWIEVKKRIHVFVAEDSSHP 604
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 216/503 (42%), Gaps = 45/503 (8%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F + K C D G S+ L K+ N I L K G + AR F +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+V S+ I+ + + A ++FD++PE + VS++ +I+ Y G A LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M + S V++A L +H A + G + V ++NAL+ Y K G+
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGLIGQLHSVA--VSSGFDSYVSVNNALLTYYGKNGD 188
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
D + VF + + VSWNSMI YG
Sbjct: 189 LDDAKRVFYGM--GGIRDEVSWNSMIVAYG------------------------------ 216
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+H++ +F EM+ G + T +SVL A + L G HG++IK GF +
Sbjct: 217 -QHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275
Query: 487 FLGTALTDTYAK-SGDIESSRRVFDRMPDKNEISWTVMVRGLAES-GYAKESINLFEEME 544
+G+ L D Y+K G + R+VF+ + + + + W MV G +++ + ++++ F +M+
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-TCVVDMLSRSGR 603
PN+ + + V+ ACS+ +G K +S+ +I N ++ M S+ G
Sbjct: 336 GIGYRPNDCSFVCVISACSNLSSPSQG-KQIHSLALKSDIPSNRISVDNALIAMYSKCGN 394
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE-HPAGYVLLSN 662
L +A + M E ++ + S+++G + E + + W L + P +S
Sbjct: 395 LQDARRLFDRMA-EHNTVSLNSMIAGYAQHGIEMESLHLFQ--WMLERQIAPTSITFISV 451
Query: 663 IYASA--GRWIDAMNVRKLMTEK 683
+ A A GR + N +M EK
Sbjct: 452 LSACAHTGRVEEGWNYFNMMKEK 474
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 207/687 (30%), Positives = 348/687 (50%), Gaps = 98/687 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK ++ + G++LH IK+ I Y + +++Y
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLY-------------------- 53
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G L A++ F + + N S+ A+I+ + K R + F++ P
Sbjct: 54 -----------SKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPE 102
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+++S+ I + G + AL LF + E G+ + T S++ AC + D L +
Sbjct: 103 PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD--DVGLIGQL 160
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ +GF+ +VSV N+L+T K G++D A+ V F MG +
Sbjct: 161 HSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV------------------FYGMGGI 202
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
R+EVSW+ MI Y Q +A LF++M R + + VL+A
Sbjct: 203 ------------RDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
L+ L G+ H ++K G ++ + + LIDLYSKCG
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG--------------------- 289
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF-DLVFAVFNEMLLS 445
G M + +++F+ + + + V W+ ++SGY ++++F + F +M
Sbjct: 290 ------------GGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI 337
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-VFLGTALTDTYAKSGDIES 504
G PN +F V+ A ++++S +GK +H +K P + + + AL Y+K G+++
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQD 397
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+RR+FDRM + N +S M+ G A+ G ES++LF+ M + I P +T +SVL AC+H
Sbjct: 398 ARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAH 457
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+G V++G YFN M+ +NI+P HY+C++D+L R+G+LSEAE+ I MPF P S WA
Sbjct: 458 TGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWA 517
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
SLL C+T+ N ++A +A + +L + A YV+LSN+YASAGRW + VRK M ++G
Sbjct: 518 SLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRG 577
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++K GCSW+EV+ ++H F + +P
Sbjct: 578 VKKKPGCSWIEVKKRIHVFVAEDSSHP 604
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 216/503 (42%), Gaps = 45/503 (8%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F + K C D G S+ L K+ N I L K G + AR F +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+V S+ I+ + + A ++FD++PE + VS++ +I+ Y G A LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M + S V++A L +H A + G + V ++NAL+ Y K G+
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLIGQLHSVA--VSSGFDSYVSVNNALLTYYGKNGD 188
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
D + VF + + VSWNSMI YG
Sbjct: 189 LDDAKRVFYGM--GGIRDEVSWNSMIVAYG------------------------------ 216
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+H++ +F EM+ G + T +SVL A + L G HG++IK GF +
Sbjct: 217 -QHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275
Query: 487 FLGTALTDTYAK-SGDIESSRRVFDRMPDKNEISWTVMVRGLAES-GYAKESINLFEEME 544
+G+ L D Y+K G + R+VF+ + + + + W MV G +++ + ++++ F +M+
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-TCVVDMLSRSGR 603
PN+ + + V+ ACS+ +G K +S+ +I N ++ M S+ G
Sbjct: 336 GIGYRPNDCSFVCVISACSNLSSPSQG-KQIHSLALKSDIPSNRISVDNALIAMYSKCGN 394
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE-HPAGYVLLSN 662
L +A + M E ++ + S+++G + E + + W L + P +S
Sbjct: 395 LQDARRLFDRMA-EHNTVSLNSMIAGYAQHGIEMESLHLFQ--WMLERQIAPTSITFISV 451
Query: 663 IYASA--GRWIDAMNVRKLMTEK 683
+ A A GR + N +M EK
Sbjct: 452 LSACAHTGRVEEGWNYFNMMKEK 474
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 308/591 (52%), Gaps = 66/591 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGV 180
TAL++ + K G + ++ F+ P +N +SW A + G+ S EA +LF ++L E +
Sbjct: 157 TALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPL 216
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
NE +++ A + +G+ V GL+ K G VSV NSL+T+ K G +D A
Sbjct: 217 HKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFH 276
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VF+ + ERN ++WS MI Y+Q+G E A
Sbjct: 277 VFESSK-------------------------------ERNSITWSAMITGYSQNGNAESA 305
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
R+F QM F P VL+A + + L G H ++K+G E V++ +AL+D+
Sbjct: 306 VRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDM 365
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG D AKE F+ + + V W+
Sbjct: 366 YAKCGCIGD----------------------------------AKECFNQFSELDIVLWT 391
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+++G++++ +F+ ++ M G PN T +S+L A A +A+LE GK LH +I+K
Sbjct: 392 AMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKF 451
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF +G+AL+ Y+K G++E VF RMP ++ I+W ++ G +++G ++INLF
Sbjct: 452 GFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLF 511
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EEM+ P+ +T ++VL ACSH GLVD+G YF SM Y + P HY C+VD+LSR
Sbjct: 512 EEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSR 571
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G LSEA+DFI S+ + + W +L C++ ++ + A + L L A Y+LL
Sbjct: 572 AGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILL 631
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
SNIYA+ +W D VR LM G+ K GCSWVE+ ++VH F +P
Sbjct: 632 SNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHP 682
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 44/239 (18%)
Query: 13 PETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKS 72
P T F T + +L + +++G+ HG ++K G + Y+ + L+ MY
Sbjct: 318 PPTEF-----TLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCI 372
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISG- 127
+A E + D+V+ M+ ++Q G E+A L+ M + N ++ T+L+
Sbjct: 373 GDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRAC 432
Query: 128 ----------------------------------FMKHGRVEESMWYFERNPFQNVISWT 153
+ K G +E+ M F R P ++VI+W
Sbjct: 433 AGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWN 492
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
+ I GF QNG +A+ LF ++ G P+ VTF ++ AC+ + G + F + K
Sbjct: 493 SIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIK 551
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 155/376 (41%), Gaps = 75/376 (19%)
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
R G +HA LK G +SN+LI YS F +
Sbjct: 29 RDGEALHAWALKSGSSSHAPVSNSLITFYSS----------FPRLF-------------- 64
Query: 393 GGYGLNGQMEEAKELFDNMPK--RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-P 449
+ A +F ++P R+ SW+++++ H+ + F ML S I P
Sbjct: 65 --------LPAAFAVFADIPAAARDVASWNSLLNPLSHHRPL-AALSHFRSMLSSSTILP 115
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ +F++ A+A S G +H KL +VF+ TAL + Y K G I ++ V
Sbjct: 116 SPHSFAAAFTAAARAHSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLV 175
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACS---- 563
FD MP +NE+SW MV G A ++E+ LF +M + + NE +VL A S
Sbjct: 176 FDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLG 235
Query: 564 -------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
H +V G+ F S+E +V M +++G + A S
Sbjct: 236 LPMGVQVHGLVVKDGMVGFVSVE------------NSLVTMYAKAGCMDAAFHVFESSK- 282
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY-------VLLSNIYASAGR 669
E +S W+++++G Y AE AV+ ++ H AG+ V + N + G
Sbjct: 283 ERNSITWSAMITG---YSQNGNAESAVR---MFSQMHAAGFPPTEFTLVGVLNACSDVGT 336
Query: 670 WIDAMNVRKLMTEKGL 685
++ LM + G
Sbjct: 337 LMEGKQAHGLMVKLGF 352
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 195/566 (34%), Positives = 309/566 (54%), Gaps = 35/566 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLSV 206
NV SW AI G+V++ A+ L+ +L G P+ T+ + K CA + +
Sbjct: 118 NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + + GF+ + V N++I V + G+L
Sbjct: 178 LGHVIQLGFDSDLFVHNAII-------------------------------HVLVSCGEL 206
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR++FDE R+ VSW+ +I Y + G +EAF L+ +M + P+ V+SA
Sbjct: 207 LAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSAS 266
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L+ L G +H + ++G+ V ++NAL+D+Y KC + +++F+++ +K V V
Sbjct: 267 AQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTV---V 323
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SW +M+ GY G +E A LF+ MP+++ V W+A+I G+++ K+ A+F+EM S
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASS 383
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P+K T + L A + + +L+ G +H + K +V LGTAL D YAK G+I+ +
Sbjct: 384 VAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAI 443
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VF+ MP +N ++WT ++ GLA G +I+ F EM + P+E+T + VL AC H G
Sbjct: 444 QVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGG 503
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LVD+G YF M Y I P +HY+C+VD+L R+G L EAE+ I SMPFEPD+ W +L
Sbjct: 504 LVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGAL 563
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
G + + N + ERA L +L YVLL+N+Y A W A VRK+M E+G+
Sbjct: 564 FFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVE 623
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNPK 712
K+ GCS +E+ V+ F + +P+
Sbjct: 624 KTPGCSSIEMNGLVYDFIIRDKSHPQ 649
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 222/478 (46%), Gaps = 71/478 (14%)
Query: 55 ERYLTTRLLIMYLGSRKSLEANEIVKDLN--GFD--LVVHNCMINANIQWGNLEEAQRLF 110
+ Y L + G S ANEI+ + GFD L VHN +I+ + G L A++LF
Sbjct: 154 DNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLF 213
Query: 111 DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALK 170
D + ++++SW + I G+V+ G + EA
Sbjct: 214 D-------------------------------ESCVRDLVSWNSIINGYVRCGLADEAFD 242
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL 230
L+ K+ E V P+EVT + A A++ + LG + I + G V + N+L+ + +
Sbjct: 243 LYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYI 302
Query: 231 KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
K ++ A+ +F+ M K+ VVSWT ++ + + G L A R+F+EMPE++ V W+ +I
Sbjct: 303 KCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGG 362
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
+ Q+ +EA LF +M S P+ LSA + L AL G+ +H +V K + +
Sbjct: 363 FVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMN 422
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
V + AL+D+Y+KCG K VF+ + ++ ++W ++I G L+GQ A
Sbjct: 423 VALGTALVDMYAKCGNIKKAIQVFEEMPGRN---SLTWTAIICGLALHGQPHAA------ 473
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
+ F+EM+ G +P++ TF VL A +++G
Sbjct: 474 -------------------------ISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQG 508
Query: 471 KDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRG 526
+D ++ K G + + L D ++G +E + + MP + + + W + G
Sbjct: 509 RDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG 566
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 68/410 (16%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFS 320
E +L +I + N SW++ I Y +S P A L+R M R S P+ +
Sbjct: 100 EWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYP 159
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ A + + HV+++G + D+F+ NA+I + CGE R +FD E
Sbjct: 160 LLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFD---ES 216
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
V +VSWNS+I GY G +EA +L+ M + N
Sbjct: 217 CVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELN------------------------- 251
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT----- 495
+P++ T V+ ASA + +L G+ LH I ++G V L AL D
Sbjct: 252 ------VMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCK 305
Query: 496 --------------------------YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
YAK G +ES+ R+F+ MP+K+ + W ++ G +
Sbjct: 306 NIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQ 365
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
+ +KE++ LF EM+ +S+ P+++T+++ L ACS G +D G+ + ++ +N+ N
Sbjct: 366 AKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVA 424
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
T +VDM ++ G + +A MP +S W +++ G + A
Sbjct: 425 LGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQPHAA 473
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 157/340 (46%), Gaps = 14/340 (4%)
Query: 84 GFDLVV--HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
G +L V N +++ I+ N+E A+ LF+ M ++ VSWT ++ G+ K G +E ++ F
Sbjct: 286 GLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLF 345
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
P ++V+ W A I GFVQ S EAL LF ++ S V P+++T + AC+++
Sbjct: 346 NEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALD 405
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G+ + + K +V++ +L+ + K G + A VF+ M R+ ++WT I+
Sbjct: 406 VGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLA 465
Query: 262 EMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNT 316
G A F EM +E+++ +++ G ++ F QMT +Y P
Sbjct: 466 LHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKL 525
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+S ++ L R+G A L + E D + AL G G
Sbjct: 526 KHYSCLVDLLG-----RAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAA 580
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
++E D + + YG E+A+++ M +R
Sbjct: 581 SKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEER 620
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 298/554 (53%), Gaps = 65/554 (11%)
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
++ I GF EA+ LF ++ E+ V+P+E TF I K C+ + G + LI
Sbjct: 91 AYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALI 150
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K GF H V N+LI + GEV++AR
Sbjct: 151 MKCGFGSHGFVKNTLIHMYANCGEVEVAR------------------------------- 179
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
R+FDEM ERN +W+ M A Y +SG EE +LF +M + + VL+A L
Sbjct: 180 RVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLA 239
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
L G ++ +V + G++ + + +L+D+Y+KCG
Sbjct: 240 DLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCG------------------------- 274
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
Q++ A+ LFD M +R+ V+WSA+ISGY + + +F+EM + PN
Sbjct: 275 ---------QVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPN 325
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
+ T S+L + A + +LE GK +H I K V LGTAL D YAK G +ESS VF
Sbjct: 326 EITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFG 385
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+MP KN +SWTV+++GLA +G K+++ F M + ++ PN++T + VL ACSH+GLVD+
Sbjct: 386 KMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDE 445
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G F SM + I+P HY C+VD+L R+G + EA FI +MP +P++ W +LL+ C
Sbjct: 446 GRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASC 505
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
K +KN +I E ++K L L H Y+LLSNIYAS GRW DA+ VR M EKG++K+ G
Sbjct: 506 KVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPG 565
Query: 691 CSWVEVRNQVHFFF 704
CS +E+ +H FF
Sbjct: 566 CSLIELDGVIHEFF 579
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 213/525 (40%), Gaps = 133/525 (25%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+LK + + +G +H ++K G ++ L+ MY
Sbjct: 129 CILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYA------------------ 170
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
NC G +E A+R+FD M ERN
Sbjct: 171 -----NC--------GEVEVARRVFDEMSERN---------------------------- 189
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
V +W + G+ ++G E +KLF ++LE ++ +EVT S+ AC + D LG
Sbjct: 190 ---VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEW 246
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + + G + + ++ SL+ + K G+VD AR +FD+M++RDVV+W
Sbjct: 247 INRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAW------------ 294
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
S MI+ Y+Q+ EA LF +M + + PN +LS+
Sbjct: 295 -------------------SAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSS 335
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L AL +G VH + K ++ V + AL+D Y+KCG + VF + V +V
Sbjct: 336 CAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKM---PVKNV 392
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+SW +I G NGQ ++A E F YL ML
Sbjct: 393 LSWTVLIQGLASNGQGKKALEYF-----------------YL--------------MLEK 421
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIES 504
PN TF VL A + +++G+DL + + G + + D ++G IE
Sbjct: 422 NVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEE 481
Query: 505 SRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+ + MP N + W R L S +++ + EE K I
Sbjct: 482 AFQFIKNMPIQPNAVIW----RTLLASCKVHKNVEIGEESLKQLI 522
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 2/233 (0%)
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
L M+ A +F + + + +++ +I G+ + +F EM + P++ TF
Sbjct: 70 LPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPC 129
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+L + + +L +G+ +H I+K GF F+ L YA G++E +RRVFD M ++N
Sbjct: 130 ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERN 189
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+W M G +SG +E + LF EM + I +E+T++SVL AC ++ G ++ N
Sbjct: 190 VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG-EWIN 248
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+K N T +VDM ++ G++ A + M D AW++++SG
Sbjct: 249 RYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMD-RRDVVAWSAMISG 300
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 306/580 (52%), Gaps = 65/580 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + KHG + + F ++ +++ A + G + G +AL+LF + +G+
Sbjct: 176 LLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPAT 235
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
TFSSI A + LG V L+ ++ +V V NSL
Sbjct: 236 HFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSL------------------ 277
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
LD + + L + RR+FDEMPER+ VS++V+IA Y + RL
Sbjct: 278 -------------LDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 324
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR+M + F ++ +LS SL + G +HA ++ +G+ + + NALID+YSK
Sbjct: 325 FREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSK 384
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG ++ AK F N +++ +SW+A+I
Sbjct: 385 CG----------------------------------MLDAAKSNFSNRSEKSAISWTALI 410
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+GY+++ Q + +F++M +G P+++TFSS++ AS+S+A + G+ LH +I+ G+
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
VF G+ L D YAK G ++ + R FD MP++N ISW ++ A G AK +I +FE M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
P+ +T LSVL ACSH+GL D+ +KYF+ M+ Y+I P HY CV+D L R G
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
S+ + + MPF+ D W S+L C+ + N+++A A L+ + YV+LSNI
Sbjct: 591 FSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNI 650
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA AG+W DA V+K+M ++G+RK G SWVE++ +++ F
Sbjct: 651 YARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSF 690
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 255/566 (45%), Gaps = 81/566 (14%)
Query: 83 NGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
GFD++ + N + + + G+L A+ +FD MP +N S ++S + G + +
Sbjct: 37 TGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHL 96
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK--ACAEIN 198
F +P +N +WT + G + +AL LF +L GV P+ VT +++ C
Sbjct: 97 FLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP- 155
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
S+ K G + HV VCN+L+ K G + AR VF M +D V++ ++
Sbjct: 156 ------SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM- 208
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
MG ++ G +A +LF M R
Sbjct: 209 ----MG--------------------------CSKEGLHTQALQLFAAMRRAGIPATHFT 238
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
FS +L+ A + L G VHA VL+ +VF++N+L+D YSKC D R +FD +
Sbjct: 239 FSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP 298
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
E+D VS+N +I Y N LF M K
Sbjct: 299 ERD---NVSYNVIIAAYAWNQCAATVLRLFREMQKLG----------------------- 332
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F+ +L ++++L + S+ + GK +H +++ LG + LG AL D Y+K
Sbjct: 333 FDRQVLP--------YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSK 384
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G +++++ F +K+ ISWT ++ G ++G +E++ LF +M + + P+ T S+
Sbjct: 385 CGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSI 444
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
+ A S ++ G + +S K + + +VDM ++ G L EA + MP E
Sbjct: 445 IKASSSLAMIGLG-RQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ER 502
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
+S +W +++S Y + A+ A+K
Sbjct: 503 NSISWNAVISA---YAHYGEAKNAIK 525
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 188/421 (44%), Gaps = 43/421 (10%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ K GF+ N + L G + AR++FD+M +++ S +IL + GDL A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+ +F P RN +W++M+ + +G +A LFR M P+ + VL+
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGC- 152
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ +H +K G++ VF+ N L+D Y K G R VF + +KD V++N
Sbjct: 153 ----TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKD---AVTYN 205
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+M+ G G +A +LF M + +G
Sbjct: 206 AMMMGCSKEGLHTQALQLFAAMRR-------------------------------AGIPA 234
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
TFSS+L +A +A L G +H +++ +VF+ +L D Y+K ++ RR+F
Sbjct: 235 THFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLF 294
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
D MP+++ +S+ V++ A + A + LF EM+K L ++L V
Sbjct: 295 DEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVH 354
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE-DFINSMPFEPDSNAWASLLS 628
G K ++ + + ++DM S+ G L A+ +F N E + +W +L++
Sbjct: 355 IG-KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS--EKSAISWTALIT 411
Query: 629 G 629
G
Sbjct: 412 G 412
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/495 (19%), Positives = 214/495 (43%), Gaps = 77/495 (15%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI----VKDL 82
++ + + L Q L + + GI + + +L + G L +++ ++
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST 266
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ ++ V+N +++ + L++ +RLFD MPER+ VS+ +I+ +
Sbjct: 267 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY-------------- 312
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+W N + L+LF ++ + G + ++++ + D +
Sbjct: 313 --------AW---------NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 355
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + G + N+LI + K G +D A+S F ++ +SWT ++ +++
Sbjct: 356 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 415
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+G EEA +LF M R +P+ + FS +
Sbjct: 416 -------------------------------NGQHEEALQLFSDMRRAGLRPDRATFSSI 444
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+ A +SL + G +H+++++ G + VF + L+D+Y+KCG + FD + E++
Sbjct: 445 IKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN- 503
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAV 438
+SWN++I Y G+ + A ++F+ M + V++ ++++ + D
Sbjct: 504 --SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 561
Query: 439 FNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
F+ M I P K ++ V+ V + + + ++++ F D + T++ +
Sbjct: 562 FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKM---LVEMPFKADPIIWTSILHSCR 618
Query: 498 KSGDIESSRRVFDRM 512
G+ E +R D++
Sbjct: 619 IHGNQELARVAADKL 633
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 146/313 (46%), Gaps = 9/313 (2%)
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
++ G AQ + G+ + + ALI + K G ++ + F ++ ISWTA I
Sbjct: 352 DVHIGKQIHAQLVLLGLASEDLLG-NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 410
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+VQNG EAL+LF + +G++P+ TFSSI KA + + LG + + ++G++
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
V + L+ + K G +D A FD M +R+ +SW ++ + G+ A ++F+ M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530
Query: 277 PE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKA 331
+ V++ ++A + +G +E + F M +YS P ++ V+ L +
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
V ++++ + D I +++ G + R+ D + + + +
Sbjct: 591 FS---QVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647
Query: 392 IGGYGLNGQMEEA 404
Y GQ E+A
Sbjct: 648 SNIYARAGQWEDA 660
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 133/318 (41%), Gaps = 62/318 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
++K +S ++ GR LH +LI++G + + L+ MY
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMY-------------------- 483
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER--- 143
+ G L+EA R FD MPERN +SW A+IS + +G + ++ FE
Sbjct: 484 -----------AKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLH 532
Query: 144 ---NPFQNVISWTAAICGFVQNGFSFEALKLF-LKLLESGVKPNEVTFSSICKACAEIND 199
NP + +++ + + NG + E +K F L + + P + ++ + +
Sbjct: 533 CGFNP--DSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR---MEKRDVVSWTVI 256
F V ++ + F+ + S++ G +LAR D+ ME D + ++
Sbjct: 591 FS---QVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647
Query: 257 LDVFIEMG---DLGEARRIFDEMPERNEVSWS-VMIAR------YNQSGYP------EEA 300
+++ G D ++I + R E +S V I + N P +E
Sbjct: 648 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDEL 707
Query: 301 FRLFRQMTRYSFKPNTSC 318
RL+++M + +KP+ +C
Sbjct: 708 DRLYKEMDKQGYKPDITC 725
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 194/580 (33%), Positives = 309/580 (53%), Gaps = 64/580 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L++ + K G ++ ++ F+ P +N++SWTA I G QN EA++ F + G P
Sbjct: 46 LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ FSS +ACA + +G + L K G + V ++L
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNL------------------ 147
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
D++ + G + +A ++F+EMP ++EVSW+ MI Y++ G EEA
Sbjct: 148 -------------EDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 194
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F++M + L A +LKA + G VH+ V+K+G E D+F+ NAL D+YSK
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 254
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G+ + VF G++ + RN VS++ +I
Sbjct: 255 AGDMESASNVF---------------------GIDSEC------------RNVVSYTCLI 281
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
GY+E +Q + +VF E+ G PN+ TFSS++ A A+ A+LE+G LH +++K+ F
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFD 341
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D F+ + L D Y K G +E + + FD + D EI+W +V + G K++I FE M
Sbjct: 342 EDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERM 401
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ PN +T +S+L CSH+GLV++GL YF SM+ Y + P HY+CV+D+L R+GR
Sbjct: 402 VDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGR 461
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L EA++FIN MPFEP++ W S L C+ + ++++ + A + L KL ++ VLLSNI
Sbjct: 462 LKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNI 521
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA+ +W D +VR M + ++K G SWV+V + H F
Sbjct: 522 YANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVF 561
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 199/435 (45%), Gaps = 68/435 (15%)
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A+ R G + L+ AG+ + N L+ + K GE+D A +FD M +R++VSWT
Sbjct: 16 AKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWT 75
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
MI+ +Q+ EA R F M P
Sbjct: 76 -------------------------------AMISGLSQNSKFSEAIRTFCGMRICGEVP 104
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
FS + A ASL ++ G +H LK GI ++F+ + L D+YSKCG D VF
Sbjct: 105 TQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVF 164
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+ + KD VSW +MI GY G+ EEA
Sbjct: 165 EEMPCKD---EVSWTAMIDGYSKIGEFEEA------------------------------ 191
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F +M+ ++ S L A ++ + + G+ +H ++KLGF D+F+G ALTD
Sbjct: 192 -LLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 495 TYAKSGDIESSRRVFDRMPD-KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
Y+K+GD+ES+ VF + +N +S+T ++ G E+ ++ +++F E+ + I PNE
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T S++ AC++ +++G + + I N + + +VDM + G L A +
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKI-NFDEDPFVSSILVDMYGKCGLLEHAIQAFDE 369
Query: 614 MPFEPDSNAWASLLS 628
+ +P AW SL+S
Sbjct: 370 IG-DPTEIAWNSLVS 383
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 178/389 (45%), Gaps = 69/389 (17%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+T+ + V+ A K LR G +HA ++ G F++N L+++YSKCGE
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGE-------- 55
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
++ A +LFD MP+RN VSW+A+ISG ++ +F
Sbjct: 56 --------------------------LDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSE 89
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F M + GE+P + FSS + A AS+ S+E GK +H +K G ++F+G+ L D
Sbjct: 90 AIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLED 149
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K G + + +VF+ MP K+E+SWT M+ G ++ G +E++ F++M +T ++
Sbjct: 150 MYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 209
Query: 555 ILSVLFACS-----------HSGLVDKGLKY-----------------FNSMEPIYNIKP 586
+ S L AC HS +V G + S ++ I
Sbjct: 210 LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 269
Query: 587 NGRH---YTCVVDMLSRSGRLSEAEDF---INSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
R+ YTC++D + ++ + + EP+ ++SL+ C +
Sbjct: 270 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 329
Query: 641 RAVKNLWKLA-EEHPAGYVLLSNIYASAG 668
+ + K+ +E P +L ++Y G
Sbjct: 330 QLHAQVMKINFDEDPFVSSILVDMYGKCG 358
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 189/443 (42%), Gaps = 105/443 (23%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G +L V + + + + G + +A ++F+ MP ++EVSWTA+I G+ K G E
Sbjct: 138 GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE-------- 189
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
EAL F K+++ V ++ S AC + + G
Sbjct: 190 -----------------------EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFG 226
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD-RMEKRDVVSWTVILDVFIE 262
SV + K GFE + V N+L + K G+++ A +VF E R+VVS+T ++D ++E
Sbjct: 227 RSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVE 286
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+ E+ +F ++ R +PN FS +
Sbjct: 287 TEQI-------------------------------EKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+ A A+ AL G +HA V+KI ++D F+S+ L+D+Y KCG + FD I +
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPT- 374
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
++WNS++ +G +G ++A + F+ M R
Sbjct: 375 --EIAWNSLVSVFGQHGLGKDAIKFFERMVDR---------------------------- 404
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAK 498
G PN TF S+L + +E+G D + K Y V G + + D +
Sbjct: 405 ---GVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDK---TYGVVPGEEHYSCVIDLLGR 458
Query: 499 SGDIESSRRVFDRMP-DKNEISW 520
+G ++ ++ +RMP + N W
Sbjct: 459 AGRLKEAKEFINRMPFEPNAFGW 481
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 95/240 (39%), Gaps = 77/240 (32%)
Query: 11 INP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
I P E +F+S I+ C +Q + QG LH ++K ++ ++++ L+ MY
Sbjct: 305 IEPNEFTFSSLIKAC-------ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYG-- 355
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+ G LE A + FD + + E++W +L+S F
Sbjct: 356 -----------------------------KCGLLEHAIQAFDEIGDPTEIAWNSLVSVFG 386
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+HG ++++ +FER +++ GVKPN +TF S
Sbjct: 387 QHGLGKDAIKFFER-------------------------------MVDRGVKPNAITFIS 415
Query: 190 ICKACAEINDFRLGLSVFGLIFKA----GFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+ C+ GL F + K E+H S +I L + G + A+ +RM
Sbjct: 416 LLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSC---VIDLLGRAGRLKEAKEFINRM 472
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 334/639 (52%), Gaps = 58/639 (9%)
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A + +++ ++ NCMI+ ++ G L +A+ +FD MP RN VSW AL++G+ + GRV
Sbjct: 12 ARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTGYARCGRV 71
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP--NEVTFSSICK 192
E+ F+R P ++V+SW A I G++ NG A LF V P N+V++ +
Sbjct: 72 AEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLF------DVMPARNDVSWLMMIS 125
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
+ R IF SVCN+L++ + G + A +F RM+ D+VS
Sbjct: 126 GYMKRKRVREARE----IFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLVS 181
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W ++ + G + A+R+FDEMPE++ VSW+ ++ Y Q+G + A+++F+ M
Sbjct: 182 WNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMP---- 237
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
++DV N ++ + D
Sbjct: 238 -----------------------------------DRDVLAWNTMMSGFVVSERLDDALR 262
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+F + ++D+ VSWN+++ GY G M+ A F MP++++ SW+ +ISGY +
Sbjct: 263 LFADMPDRDL---VSWNTILQGYVQQGDMDGATAWFRKMPEKDEASWNTLISGYKDEGAL 319
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+L+ +EM G P+++T+S + +S+A+L G+ +H IK GF D + ++L
Sbjct: 320 NLL----SEMTQGGYRPDQATWSVAISICSSLAALGCGRMVHVCTIKTGFERDALVMSSL 375
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
Y+K G I + +VFD + ++ ++W M+ A G A E++ LF+ M K +P+
Sbjct: 376 ISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALTLFDRMTKDGFSPDH 435
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
T LSVL AC+H G + +G +F SM+ +N+ P HY+C+VD+L RSG + +A +F
Sbjct: 436 ATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDHYSCMVDLLGRSGFVHQAYNFTR 495
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
+P + NAW +L S C + + Q+ E KN+ + Y LLSNIYA+ G W
Sbjct: 496 RIPSDLQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWSS 555
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A +VR LM E+GL+K GCSW+E++ V F +P
Sbjct: 556 AASVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDKAHP 594
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 191/383 (49%), Gaps = 46/383 (12%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL Y + EA E+ + +V N MI+ + G ++ A+ LFD MP RN+VSW
Sbjct: 61 LLTGYARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSW 120
Query: 122 TALISGFMKHGRVEESMWYFERNP-------------------------------FQNVI 150
+ISG+MK RV E+ F+R P +++
Sbjct: 121 LMMISGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLV 180
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A I G+ + G A +LF ++ E + V++++I + + D V
Sbjct: 181 SWNAMITGYTRAGMMQVAQRLFDEMPEK----DTVSWTAIVRGYLQNGDVDAAWKV---- 232
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
F+ ++ V N++++ + +D A +F M RD+VSW IL +++ GD+ A
Sbjct: 233 FQDMPDRDVLAWNTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGAT 292
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
F +MPE++E SW+ +I+ Y G A L +MT+ ++P+ + +S+ +S +SL
Sbjct: 293 AWFRKMPEKDEASWNTLISGYKDEG----ALNLLSEMTQGGYRPDQATWSVAISICSSLA 348
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
AL G VH +K G E+D + ++LI +YSKCG + VFD IV++D V+WN+
Sbjct: 349 ALGCGRMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRD---TVTWNA 405
Query: 391 MIGGYGLNGQMEEAKELFDNMPK 413
MI Y +G EA LFD M K
Sbjct: 406 MIATYAYHGLAAEALTLFDRMTK 428
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 202/443 (45%), Gaps = 55/443 (12%)
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
+ G V AR VFD M +R+V +W ++ + G L +AR +FD MP RN VSW+ ++
Sbjct: 4 FRAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLT 63
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL------------SALASLKALRSGMH 337
Y + G EA LF +M S + S L + + + M
Sbjct: 64 GYARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMM 123
Query: 338 VHAHVLKIGIE--KDVF---------ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ ++ + + +++F + NAL+ Y++ G KD +F + D +V
Sbjct: 124 ISGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPD---LV 180
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWN+MI GY G M+ A+ LFD MP+++ VSW+AI+ GYL++ D + VF +M
Sbjct: 181 SWNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDM---- 236
Query: 447 EIPNKSTFSSVLCASASVAS--LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
P++ + S V S L+ L + D+ + Y + GD++
Sbjct: 237 --PDRDVLAWNTMMSGFVVSERLDDALRLFADMPD----RDLVSWNTILQGYVQQGDMDG 290
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ F +MP+K+E SW ++ G + G ++NL EM + P++ T + CS
Sbjct: 291 ATAWFRKMPEKDEASWNTLISGYKDEG----ALNLLSEMTQGGYRPDQATWSVAISICSS 346
Query: 565 SGLVDKGLKYFNSMEPIYNIKP----NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
+ G M + IK + + ++ M S+ G ++EA + + + D+
Sbjct: 347 LAALGCG-----RMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFD-LIVQRDT 400
Query: 621 NAWASLLSGCKTYKNEQIAERAV 643
W ++++ TY +A A+
Sbjct: 401 VTWNAMIA---TYAYHGLAAEAL 420
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 171/364 (46%), Gaps = 24/364 (6%)
Query: 30 DITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN 83
D+ S N +I G G L K+ T ++ YL + A ++ +D+
Sbjct: 178 DLVSWNAMITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMP 237
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
D++ N M++ + L++A RLF MP+R+ VSW ++ G+++ G ++ + +F +
Sbjct: 238 DRDVLAWNTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRK 297
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P ++ SW I G+ G AL L ++ + G +P++ T+S C+ + G
Sbjct: 298 MPEKDEASWNTLISGYKDEG----ALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCG 353
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V K GFE+ V +SLI++ K G + A VFD + +RD V+W ++ +
Sbjct: 354 RMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYH 413
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSC 318
G EA +FD M + + ++ +++ GY E FR M + ++ P +
Sbjct: 414 GLAAEALTLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDH 473
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC---GETKDGRLVFD 375
+S ++ L RSG A+ I D+ I NA L+S C G+ + G LV
Sbjct: 474 YSCMVDLLG-----RSGFVHQAYNFTRRIPSDLQI-NAWETLFSSCNAHGDIQLGELVAK 527
Query: 376 SIVE 379
++++
Sbjct: 528 NVLQ 531
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 204/585 (34%), Positives = 329/585 (56%), Gaps = 52/585 (8%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI+ GRV ++ F+ P +V+SWTA + + + G +A +LF + + N
Sbjct: 48 LIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDR---PDARRN 104
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
VT++++ A RL VD A ++F
Sbjct: 105 VVTWTALLSGYARA---RL--------------------------------VDEAEALFQ 129
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
RM +R+VVSW +L+ + G +G+A +FD MP R+ SW++++A +SG ++A L
Sbjct: 130 RMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKAREL 189
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYS 362
F +M + + ++ ++ +A RSG A VL + E++V NA+I Y+
Sbjct: 190 FGRMP----ERDVMAWTTMVDGVA-----RSGKVDEARVLFDSMPERNVVSWNAMISGYT 240
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
+ + +F + E+D+A S N M+ G+ N ++ A+ELFD MP+RN V+W+ +
Sbjct: 241 RNHRIDEALDLFMKMPERDIA---SCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTM 297
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
++GYL+ KQ +L +F+ ML++G PN+ TF L A + +A+L +GK +H I K F
Sbjct: 298 MNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTF 357
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+D F+ +AL + YAK G+I +R++FD +K+ ISW ++ A G E+I L+E+
Sbjct: 358 QFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEK 417
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M++ PN++T + +L ACSHSGLVD+GLK F SM +I HYTC++D+ SR+G
Sbjct: 418 MQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAG 477
Query: 603 RLSEAEDFINSMPFEPDSNA-WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
RL +A+ I+ + +P S + W++LL GC + NE I A +NL + ++ Y LLS
Sbjct: 478 RLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLLQAEPDNAGTYTLLS 537
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
NIYASAG+W +A +R M +GL+K GCSW+EV N+VH F +
Sbjct: 538 NIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVAR 582
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 220/449 (48%), Gaps = 21/449 (4%)
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
++EA+ LF MP+RN VSW ++ + GRV ++ F+R P ++ SW + V++
Sbjct: 121 VDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRS 180
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
G +A +LF ++ E V + ++ ++++ R+ +F + E++V
Sbjct: 181 GSVDKARELFGRMPERDVMAWTTMVDGVARS-GKVDEARV-------LFDSMPERNVVSW 232
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N++I+ + +D A +F +M +RD+ S +++ FI+ DL AR +FDEMPERN V
Sbjct: 233 NAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVV 292
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+W+ M+ Y + E A LF M +PN F L A + L AL G VH +
Sbjct: 293 TWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMI 352
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
K + D F+ +AL+++Y+KCGE R +FD EKD ++SWN +I Y +G
Sbjct: 353 CKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKD---LISWNGIIAAYAHHGVGI 409
Query: 403 EAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
EA L++ M + NDV++ ++S D +F M+ I + + L
Sbjct: 410 EAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCL 469
Query: 459 CASASVAS-LEKGKDL-HGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
S A L+ K L H IK G + LG G++ ++R + PD
Sbjct: 470 IDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNL-AARNLLQAEPD 528
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEM 543
N ++T++ A +G KE+ + EM
Sbjct: 529 -NAGTYTLLSNIYASAGKWKEAAEIRSEM 556
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 171/376 (45%), Gaps = 73/376 (19%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+A E+ + D++ M++ + G ++EA+ LFD MPERN VSW A+ISG+ ++ R
Sbjct: 185 KARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHR 244
Query: 134 VEESMWYF----ERN---------------------------PFQNVISWTAAICGFVQN 162
++E++ F ER+ P +NV++WT + G+++
Sbjct: 245 IDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKG 304
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
S AL LF +L +G +PN+VTF AC+++ G V +I K F+ V
Sbjct: 305 KQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVE 364
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
++L+ + K GE+ LAR +FD ++D++SW I
Sbjct: 365 SALMNVYAKCGEIGLARKLFDLSREKDLISWNGI-------------------------- 398
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
IA Y G EA L+ +M ++PN + ++LSA + + G+ + +
Sbjct: 399 -----IAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESM 453
Query: 343 LK---IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ I + + + LIDL S+ G D + + + K + V W++++GG +G
Sbjct: 454 VNDRSIAVRDEHY--TCLIDLCSRAGRLDDAKRLIHYLKIKPASGSV-WSALLGGCNAHG 510
Query: 400 QMEEAKELFDNMPKRN 415
E N+ RN
Sbjct: 511 N-----ESIGNLAARN 521
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 202/636 (31%), Positives = 329/636 (51%), Gaps = 75/636 (11%)
Query: 83 NGFDLVVHNC--MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NG V+ C ++ A I L +A +L MP+ + VS+ ++SG+ K G V E++
Sbjct: 44 NGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAIKL 103
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ ++ SW + G V+N E L F+K+ S V+P+ T++ I C D
Sbjct: 104 FDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC----DL 159
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G V I K VC+ L D T +L ++
Sbjct: 160 GFGQQVHADIVK--------VCSDL-----------------------DAFIGTNLLRMY 188
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
E+G++G+AR++FD MP R V+W+ MI+ Y++ G +++ LFRQ+ R + ++
Sbjct: 189 AEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYA 248
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
IVL+ A+ + M VH+ +++ G D F +NAL++LYSKCG
Sbjct: 249 IVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCG--------------- 293
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+V S A LF+ +P ++ VSW+ II G+L+ + +F
Sbjct: 294 ---YVAS----------------ASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFY 334
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF-PYDVFLGTALTDTYAKS 499
+M L PN TF +L A A + +KG+ HG ++K G DV +G+A+ D Y+K
Sbjct: 335 QMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKC 394
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM---EKTSITPNELTIL 556
G++ + R F MP+++ SW ++ G A++G +++ L+ EM + I PNE+T +
Sbjct: 395 GEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFV 454
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
VL ACSH+GL+ +G YF M + IKP HYTC+VD+L R+G L EAE I ++P
Sbjct: 455 GVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPI 514
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
+PD+ W +LL CK + + Q+ R ++L+ + + YVLL+N Y G W +A+ +
Sbjct: 515 KPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEI 574
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
R++M +G+ K+ GCSWVE+ +H F +P+
Sbjct: 575 REVMEARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQ 610
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 200/465 (43%), Gaps = 63/465 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H ++K + ++ T LL MY + +A ++ + LV N MI+ +
Sbjct: 162 GQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSK 221
Query: 100 WGNLEEAQRLFDGMPER-------------NEVS--W----------------------- 121
+G +++ LF + NE + W
Sbjct: 222 YGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFT 281
Query: 122 -TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
AL++ + K G V + FE P Q+V+SWT I GF+Q+G EA+ LF ++ +
Sbjct: 282 NNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDI 341
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLAR 239
+PN TF + ACA+ N F+ G GL+ K G V V ++++ + K GE+ A
Sbjct: 342 EPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDAL 401
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM----PE---RNEVSWSVMIARYN 292
F M +RD+ SW I+ + + G +A ++++EM P NEV++ ++ +
Sbjct: 402 RAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACS 461
Query: 293 QSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
+G +E + F++M ++ KP ++ ++ L L+ A +L + I+ D
Sbjct: 462 HNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEA---EALILALPIKPDN 518
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ AL+ G+ + R + + + + ++ + Y G+ EA E+ + M
Sbjct: 519 VMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVM 578
Query: 412 PKRN-----DVSWSAI-------ISGYLEHKQFDLVFAVFNEMLL 444
R SW I ++G H Q ++ V + L
Sbjct: 579 EARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQIEVASQVLPRLYL 623
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 315/585 (53%), Gaps = 54/585 (9%)
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ +S+ F F ++W + I + +G ++L F+ +L SG+ P+ F S+ K+
Sbjct: 56 LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM------GEVDL-ARSVFDRME 246
CA + D LG S+ G I + G + + N+L+ + K+ G L A VFD M
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+R TV V E R+IF+ MPE++ VSW+ +IA ++G EE R+ R+
Sbjct: 176 ERTRSVRTV--SVLSE----DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M + KP++ S VL +A + G +H ++ G++ D++++++LID+Y+KC
Sbjct: 230 MGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTR 289
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
D VF + E R+ +SW++II+G
Sbjct: 290 VADSCRVFTLLTE----------------------------------RDGISWNSIIAGC 315
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+++ FD F +ML++ P +FSS++ A A + +L GK LHG I + GF ++
Sbjct: 316 VQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENI 375
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+ ++L D YAK G+I +++++FDRM ++ +SWT M+ G A G A ++I LFE+ME
Sbjct: 376 FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETE 435
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I +VL ACSH GLVD+ KYFNSM + I P HY V D+L R+GRL E
Sbjct: 436 GIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEE 488
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A DFI M P + WA+LLS C+ +KN +AE+ + ++ + Y+LL+NIY++
Sbjct: 489 AYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSA 548
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A RW +A R M G+RK+ CSW+EV+N+V+ F + +P
Sbjct: 549 ARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHP 593
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 187/386 (48%), Gaps = 26/386 (6%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
++ + L ++ R+F+ + ++W +I Y G P ++ F M P+ +
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG---ETKDGRL--- 372
F VL + A L L G +H +++++G++ D++ NAL+++YSK E+ RL
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 373 -VFDSIVEKD----VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
VFD + E+ V+S +S+ +++F+ MP+++ VSW+ II+G
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSV-------------RKIFEMMPEKDLVSWNTIIAGNA 215
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+ ++ + EM + P+ T SSVL A + +GK++HG I+ G D++
Sbjct: 216 RNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIY 275
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ ++L D YAK + S RVF + +++ ISW ++ G ++G E + F +M
Sbjct: 276 VASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAK 335
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
I P + S++ AC+H + G K + N + +VDM ++ G + A
Sbjct: 336 IKPKSYSFSSIMPACAHLTTLHLG-KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTA 394
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTY 633
+ + M D +W +++ GC +
Sbjct: 395 KQIFDRMRLR-DMVSWTAMIMGCALH 419
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 214/500 (42%), Gaps = 102/500 (20%)
Query: 17 FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL-------GS 69
F S +++C LL D+ NL G +LHG++I+ G+ + Y L+ MY
Sbjct: 109 FPSVLKSC-ALLMDL---NL---GESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESG 161
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
R+ L A E+ FD + + + + +++F+ MPE++ VSW +I+G
Sbjct: 162 RQRLGAGEV------FDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNA 215
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
++G EE+ L++ ++ + +KP+ T SS
Sbjct: 216 RNGLYEET-------------------------------LRMIREMGGANLKPDSFTLSS 244
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ AE D G + G + G + + V +SLI + K V + VF + +RD
Sbjct: 245 VLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERD 304
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+SW I IA Q+G +E R FRQM
Sbjct: 305 GISWNSI-------------------------------IAGCVQNGLFDEGLRFFRQMLM 333
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
KP + FS ++ A A L L G +H ++ + G ++++FI+++L+D+Y+KCG +
Sbjct: 334 AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRT 393
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+ +FD + +D +VSW +MI G L+GQ +A ELF+ M A+++
Sbjct: 394 AKQIFDRMRLRD---MVSWTAMIMGCALHGQAPDAIELFEQMETEG---IKAVLTACSHG 447
Query: 430 KQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
D + FN M G P +++V DL G+ +L YD
Sbjct: 448 GLVDEAWKYFNSMTRDFGIAPGVEHYAAV-------------SDLLGRAGRLEEAYDFIC 494
Query: 489 GTALTDTYAKSGDIESSRRV 508
G + T + + S+ RV
Sbjct: 495 GMHIGPTGSIWATLLSACRV 514
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 41/342 (11%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
S+R +F + PE KD+ S N +I G A + G+++E T R++
Sbjct: 191 SVRKIFEMMPE--------------KDLVSWNTIIAGNA------RNGLYEE---TLRMI 227
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
+ + + D V+ N +I G + G+ V+ ++
Sbjct: 228 -------REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVA-SS 279
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K RV +S F ++ ISW + I G VQNG E L+ F ++L + +KP
Sbjct: 280 LIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPK 339
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+FSSI ACA + LG + G I + GF++++ + +SL+ + K G + A+ +FD
Sbjct: 340 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFD 399
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
RM RD+VSWT ++ G +A +F++M E +V+ A + G +EA++
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQM--ETEGIKAVLTA-CSHGGLVDEAWKY 456
Query: 304 FRQMTR-YSFKPNTSCFSIVLSALASLKALRS------GMHV 338
F MTR + P ++ V L L GMH+
Sbjct: 457 FNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 498
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 199/598 (33%), Positives = 319/598 (53%), Gaps = 34/598 (5%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
ER+ +LI + + G ++ F++ +NV+SWT+ I G+ + G EA+ LF +
Sbjct: 171 ERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFE 230
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
++E G++PN VT + ACA++ D +LG V I + E + + N+L+ + +K G
Sbjct: 231 MVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGA 290
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+D +AR+IFDE ++N V ++ +++ Y +
Sbjct: 291 ID-------------------------------KARKIFDECVDKNLVLYNTIMSNYVRQ 319
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G E + +M ++ +P+ +SA + L + G H +VL+ G+E +
Sbjct: 320 GLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVC 379
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NA+I++Y KCG+ + VFD ++ K VSWNS+I G+ NG ME A ++F MP
Sbjct: 380 NAIINMYMKCGKQEMACRVFDRMLNKTR---VSWNSLIAGFVRNGDMESAWKIFSAMPDS 436
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ VSW+ +I ++ F +F M G +K T V A + +L+ K +H
Sbjct: 437 DLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIH 496
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
G I K +D+ LGTAL D +A+ GD +S+ +VF++M ++ +WT + +A G
Sbjct: 497 GYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGT 556
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
+I LF+EM + I P+ + +++L A SH GLV++G F SM+ IY I P HY C+
Sbjct: 557 GAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCM 616
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L R+G LSEA INSM EP+ W SLL+ C+ +KN IA A + + +L E
Sbjct: 617 VDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERT 676
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+VLLSNIYASAGRW D VR + EKG K G S +E+ ++ F + +P+
Sbjct: 677 GIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPE 734
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 219/509 (43%), Gaps = 98/509 (19%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+++ I GF G ++A+ +F +L+ G P+ TF + AC + G V G I
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K GFE+ + V NSLI + GE+D R VFD+M +R+VVSWT +
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSL--------------- 211
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
I Y + G +EA LF +M +PN+ V+SA A L+
Sbjct: 212 ----------------IGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQD 255
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L+ G V + ++ +E + + NAL+D+Y KCG R +FD V+K
Sbjct: 256 LQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDK----------- 304
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
N V ++ I+S Y+ V AV EML G P++
Sbjct: 305 -----------------------NLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDR 341
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFP-------------------------YDV 486
T S + A + + + GK HG +++ G +D
Sbjct: 342 ITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDR 401
Query: 487 FLG------TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
L +L + ++GD+ES+ ++F MPD + +SW M+ L + KE+I LF
Sbjct: 402 MLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELF 461
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
M+ IT +++T++ V AC + G +D K+ + +I + T +VDM +R
Sbjct: 462 RVMQSEGITADKVTMVGVASACGYLGALDLA-KWIHGYIKKKDIHFDMHLGTALVDMFAR 520
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSG 629
G A N M + D +AW + +
Sbjct: 521 CGDPQSAMQVFNKM-VKRDVSAWTAAIGA 548
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 173/392 (44%), Gaps = 54/392 (13%)
Query: 251 VSWTVILDVFIEMG---DLGEARRIFDEMPERNEVS-----WSVMIARYNQSGYPEEAFR 302
+S T ++ EMG L A++ + E N + +S +I ++ G +A
Sbjct: 66 LSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIV 125
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+FRQ+ P+ F VLSA AL G VH ++K+G E+D+F+ N+LI Y
Sbjct: 126 VFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYG 185
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
+CGE R VFD + E++ VVSW S+IGGY G +EA L
Sbjct: 186 ECGEIDCMRRVFDKMSERN---VVSWTSLIGGYAKRGCYKEAVSL--------------- 227
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
F EM+ G PN T V+ A A + L+ G+ + I +L
Sbjct: 228 ----------------FFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELEL 271
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+ + AL D Y K G I+ +R++FD DKN + + ++ G A+E + + E
Sbjct: 272 EVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGE 331
Query: 543 MEKTSITPNELTILSVLFACSH-----SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
M K P+ +T+LS + ACS G G N +E N+ +++M
Sbjct: 332 MLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNV------CNAIINM 385
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ G+ A + M +W SL++G
Sbjct: 386 YMKCGKQEMACRVFDRM-LNKTRVSWNSLIAG 416
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
L G+D V N +IN ++ G E A R+FD M + VSW +LI+GF+++G +E + F
Sbjct: 372 LEGWDNVC-NAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIF 430
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
P +++SW I VQ EA++LF + G+ ++VT + AC +
Sbjct: 431 SAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALD 490
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
L + G I K + + +L+ + + G+ A VF++M KRDV +WT +
Sbjct: 491 LAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMA 550
Query: 262 EMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNT 316
G+ A +FDEM ++ + V + ++ + G E+ + +FR M Y P
Sbjct: 551 MEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQA 610
Query: 317 SCFSIVLSALA 327
+ ++ L
Sbjct: 611 VHYGCMVDLLG 621
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 330/614 (53%), Gaps = 54/614 (8%)
Query: 95 NANIQW----GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
NA I W GN+E A+ FD MP R S+ ALI+G+ ++ + ++ F R P +++
Sbjct: 21 NARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLG 80
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL- 209
S+ A I G + L + + P+ V+F+S+ + R GL +
Sbjct: 81 SYNALIAGLSLRRHTLPDAAAALASIP--LPPSVVSFTSLLRGY-----VRHGLLADAIR 133
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+F E++ L+ L G V+ AR +FD M +DVV+ T +L + + G + EA
Sbjct: 134 LFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEA 193
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R +FDEMP+RN VSW+ MI+ Y Q+G A +LF M
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMP--------------------- 232
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+++ A++ Y + G +D +F+++ + VA + N
Sbjct: 233 ------------------DRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVA---ACN 271
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+M+ G+G +G ++ AK +F+ M R+D +WSA+I Y +++ + F EML G P
Sbjct: 272 AMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRP 331
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
N ++F S+L A++A+ + G++LH +++ F DVF +AL Y K G+++ ++RVF
Sbjct: 332 NYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+ K+ + W M+ G A+ G +E++ +F+++ + P+ +T + VL ACS++G V
Sbjct: 392 NMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVK 451
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+G + FNSM +I+ HY+C+VD+L R+G + EA D IN+MP EPD+ W +L+
Sbjct: 452 EGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGA 511
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ +KN +IAE A K L +L YVLLS+IY S GRW DA ++RK ++ + L KS
Sbjct: 512 CRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSP 571
Query: 690 GCSWVEVRNQVHFF 703
GCSW+E VH F
Sbjct: 572 GCSWIEYNKMVHLF 585
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 225/509 (44%), Gaps = 89/509 (17%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLT--------TRLLIMYLGSRKSLEANEIVK 80
+D+ S N +I G +L H + + T LL Y+ +A +
Sbjct: 77 RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
+ + V + ++ + G + EA++LFD MP+++ V+ TA++SG+ + GR+ E+
Sbjct: 137 QMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARAL 196
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +NV+SWTA I G+ QNG A KLF E NEV+++++ +
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGKVILARKLF----EVMPDRNEVSWTAMLVGYIQAGHV 252
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+F A + V+ CN+++ + G VD A+++F+RM RD +W
Sbjct: 253 EDAED----LFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTW------- 301
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
S MI Y Q+ + EA FR+M +PN + F
Sbjct: 302 ------------------------SAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFI 337
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+L+ A+L G +HA +L+ + DVF +ALI +Y KCG + VF+ K
Sbjct: 338 SILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPK 397
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D VV WNSMI GY +G EEA +F+
Sbjct: 398 D---VVMWNSMITGYAQHGLGEEA-------------------------------LGIFD 423
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA----LTDTY 496
++ L+ P+ T+ VL A + +++G+++ +G + LG A + D
Sbjct: 424 DLRLARMAPDGITYIGVLTACSYTGKVKEGREIFN---SMGMNSSIRLGAAHYSCMVDLL 480
Query: 497 AKSGDIESSRRVFDRMP-DKNEISWTVMV 524
++G ++ + + + MP + + I W ++
Sbjct: 481 GRAGLVDEALDLINNMPVEPDAIIWGALM 509
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 190/422 (45%), Gaps = 77/422 (18%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T LL +L + + EA ++ ++ D+V M++ Q G + EA+ LFD MP+RN V
Sbjct: 147 TVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVV 206
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SWTA+ISG+ ++G+V + FE P +N +SWTA + G++Q G +A LF + +
Sbjct: 207 SWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHP 266
Query: 180 VKP---------------------------NEVTFSSICKACAEINDFRL-GLSVFGLIF 211
V ++ T+S++ K E N+F + LS F +
Sbjct: 267 VAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKV-YEQNEFLMEALSTFREML 325
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLG 267
G + + S++T+ + D R + M + DV + + ++ ++I+ G+L
Sbjct: 326 CRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLD 385
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A+R+F+ ++ V W+ MI Y Q G EEA +F + P+ + VL+A
Sbjct: 386 KAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTAC- 444
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDV 382
S G+ K+GR +F+S+ +
Sbjct: 445 ----------------------------------SYTGKVKEGREIFNSMGMNSSIRLGA 470
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNE 441
AH ++ M+ G G ++EA +L +NMP D + W A++ HK ++ +
Sbjct: 471 AH---YSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKK 527
Query: 442 ML 443
+L
Sbjct: 528 LL 529
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 44/264 (16%)
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM-- 442
VV+ N+ I G +E A+ FD MP R S++A+I+GY + D +F+ M
Sbjct: 17 VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76
Query: 443 --------LLSGEIPNKSTFSSVLCASASV---------ASLEKGKDLHGKI---IKL-- 480
L++G + T A AS+ SL +G HG + I+L
Sbjct: 77 RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136
Query: 481 ------GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
Y V LG L +G + +R++FD MPDK+ ++ T M+ G ++G
Sbjct: 137 QMPERNHVTYTVLLGGFL-----DAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRIT 191
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E+ LF+EM K N ++ +++ + +G V K F M N +T +
Sbjct: 192 EARALFDEMPKR----NVVSWTAMISGYAQNGKVILARKLFEVMP-----DRNEVSWTAM 242
Query: 595 VDMLSRSGRLSEAEDFINSMPFEP 618
+ ++G + +AED N+MP P
Sbjct: 243 LVGYIQAGHVEDAEDLFNAMPDHP 266
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 203/567 (35%), Positives = 308/567 (54%), Gaps = 36/567 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N++ W G + ALKL++ ++ G+ PN TF + K+CA+ F+ G +
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + K G + + V SLI++ ++ G ++ A VFD+ RDVVS+T ++ + G +
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
A+++FDE+P ++ VSW+ MI+ Y ++G +EA LF+ M + + +P+ S V+SA A
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
++ G VH + G ++ I NALIDLYSKCGE
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE--------------------- 316
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+E A LF+ +P ++ +SW+ +I GY + +F EML SGE
Sbjct: 317 -------------LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESS 505
PN T S+L A A + +++ G+ +H I K G L T+L D YAK GDIE++
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+VF+ + K+ SW M+ G A G A S +LF M K I P+++T + +L ACSHS
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G++D G F +M Y + P HY C++D+L SG EAE+ IN M EPD W S
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 543
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL CK + N ++ E +NL K+ E+P YVLLSNIYASAGRW + R L+ +KG+
Sbjct: 544 LLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM 603
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K GCS +E+ + VH F +P+
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPR 630
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 201/365 (55%), Gaps = 5/365 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A +F + E N + W+ M + S P A +L+ M PN+ F VL +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A KA + G +H HVLK+G + D+++ +LI +Y + G +D VFD +D V
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD---V 200
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ ++I GY G +E A++LFD +P ++ VSW+A+ISGY E + +F +M+ +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P++ST +V+ A A S+E G+ +H I GF ++ + AL D Y+K G++E++
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+F+R+P K+ ISW ++ G KE++ LF+EM ++ TPN++T+LS+L AC+H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 566 GLVDKGLKYFNSMEP-IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
G +D G ++ + + T ++DM ++ G + A NS+ ++W
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWN 439
Query: 625 SLLSG 629
+++ G
Sbjct: 440 AMIFG 444
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 204/431 (47%), Gaps = 73/431 (16%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T +LK +G+ +HGH++K G
Sbjct: 133 NSY--TFPFVLKSCAKSKAFKEGQQIHGHVLKLGC------------------------- 165
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
DL VH +I+ +Q G LE+A ++FD P R+ VS+TALI G+ G +E +
Sbjct: 166 ------DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F+ P ++V+SW A I G+ + G EAL+LF ++++ V+P+E T ++ ACA+
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
LG V I GF ++ + N+LI L K GE++ A +F+R+ +DV+SW ++
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ M +EA LF++M R PN
Sbjct: 340 GGYTHM-------------------------------NLYKEALLLFQEMLRSGETPNDV 368
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+L A A L A+ G +H ++ K G+ + +LID+Y+KCG+ + VF+
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQ 431
SI+ K ++ SWN+MI G+ ++G+ + + +LF M K +D+++ ++S
Sbjct: 429 SILHKSLS---SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 432 FDLVFAVFNEM 442
DL +F M
Sbjct: 486 LDLGRHIFRTM 496
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 193/429 (44%), Gaps = 90/429 (20%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID--LYSKCGETKDGRL-VFDSIVE 379
LS L + K L+S +HA ++KIG+ + + LI+ + S E + VF +I E
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ ++ WN+M G+ L+ A +L+
Sbjct: 97 PN---LLIWNTMFRGHALSSDPVSALKLYVC----------------------------- 124
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG---------- 489
M+ G +PN TF VL + A + ++G+ +HG ++KLG D+++
Sbjct: 125 --MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQN 182
Query: 490 ---------------------TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
TAL YA G IE+++++FD +P K+ +SW M+ G A
Sbjct: 183 GRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYA 242
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
E+G KE++ LF++M KT++ P+E T+++V+ AC+ SG ++ G + ++ + N
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD-HGFGSNL 301
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
+ ++D+ S+ G L A +P++ D +W +L+ G Y + + + A+ +
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG---YTHMNLYKEALLLFQE 357
Query: 649 L--AEEHPAGYVLLSNIYASA-------GRWIDAM---NVRKLMTEKGLRKS-----GGC 691
+ + E P +LS + A A GRWI ++ + LR S C
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 692 SWVEVRNQV 700
+E +QV
Sbjct: 418 GDIEAAHQV 426
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 343/724 (47%), Gaps = 104/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L G LH + K G E Y+ L+ +Y + A ++ + D
Sbjct: 219 VLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKD 278
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGR--------- 133
V N +I+ Q G + A LF M + + V+ +L+S +G
Sbjct: 279 EVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338
Query: 134 --------------------------VEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
++ + F +NV+ W + F + E
Sbjct: 339 YVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSE 398
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ ++F ++ G+ PN+ T+ SI + C + LG + + K GF+ +V VC
Sbjct: 399 SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVC----- 453
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+V++D++ + G L A I + E + VSW+ +
Sbjct: 454 --------------------------SVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTAL 487
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y Q EA + F++M + + FS +SA A ++AL G +HA G
Sbjct: 488 ISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGY 547
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+D+ I NAL+ LY++CG K EA
Sbjct: 548 SEDLSIGNALVSLYARCGRIK----------------------------------EAYLE 573
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ + ++ +SW+ +ISG+ + + VF +M + + TF S + A+A++A++
Sbjct: 574 FEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANI 633
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +H IIK GF D+ + AL YAK G IE +RR F MP+KN++SW M+ G
Sbjct: 634 KQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGY 693
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ GY E++NLFE+M++ PN +T + VL ACSH GLV KGL YF SM + + P
Sbjct: 694 SQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPK 753
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CVVD++SR+G LS A FI MP EPD+ W +LLS C +KN ++ E A ++L
Sbjct: 754 PAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLL 813
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L E A YVLLSN+YA +G+W R++M +G++K G SW+EV+N VH F+
Sbjct: 814 ELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGD 873
Query: 708 DHNP 711
+P
Sbjct: 874 RLHP 877
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 185/738 (25%), Positives = 323/738 (43%), Gaps = 137/738 (18%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL------GSRKSLE- 74
+T + LL + +++ + LHG ++K G E L +L+ +Y G K E
Sbjct: 11 QTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFED 70
Query: 75 -ANEIVKD----LNGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
N V+ ++GF L + +CMI N+ + A L R + +
Sbjct: 71 MPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRY 130
Query: 122 T--------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQ 161
LI + K+G + + F+ ++ +SW A I GF Q
Sbjct: 131 AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQ 190
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
NG+ EA+ LF ++ +G+ P FSS+ C +I F +G + L+FK G V
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
CN+L+TL +M A VF +M+ +D E
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKMQSKD-------------------------------E 279
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
VS++ +I+ Q G+ + A LF +M R KP+ + +LSA AS AL G +H++
Sbjct: 280 VSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSY 339
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
V+K GI D+ + AL+DLY C + K +F + +VV WN M+ +G
Sbjct: 340 VIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF---LTAQTENVVLWNVMLVAFG----- 391
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
DN+ + F +F +M + G IPN+ T+ S+L
Sbjct: 392 -----KLDNLSES---------------------FRIFRQMQIKGLIPNQFTYPSILRTC 425
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
SV +L+ G+ +H ++IK GF ++V++ + L D YAK G ++++ + + + + +SWT
Sbjct: 426 TSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWT 485
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ G A+ E++ F+EM I + + S + AC+ +++G + ++ +
Sbjct: 486 ALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG-RQIHAQSYV 544
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE----PDSNAWASLLSGCKTYKNEQ 637
+ +V + +R GR+ EA + FE DS +W L+SG +
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRIKEA-----YLEFEKIDAKDSISWNGLISG---FAQSG 596
Query: 638 IAERAVKNLWKL--AEEHPAGYVLLSNIYASA-------GRWIDAMNVRKLMTEKGLRKS 688
E A+K ++ A+ + + S + A+A G+ I AM +++
Sbjct: 597 YCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKR---------- 646
Query: 689 GGCSWVEVRNQVHFFFQK 706
G S +EV N + F+ K
Sbjct: 647 GFDSDIEVSNALITFYAK 664
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 228/537 (42%), Gaps = 117/537 (21%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T LL S + +G LH ++IK GI + + LL +Y+ A+E+
Sbjct: 316 TVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTA 375
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSW----------------- 121
++V+ N M+ A + NL E+ R+F M + N+ ++
Sbjct: 376 QTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGE 435
Query: 122 ------------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ LI + KHG+++ + +V+SWTA I G+ Q+
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHN 495
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EALK F ++L G++ + + FSS ACA I G + + +G+ + +S+ N
Sbjct: 496 LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN 555
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L++L + G + A F++++ +D +SW ++ F
Sbjct: 556 ALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFA---------------------- 593
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
QSGY E+A ++F QM R + + F +SA A++ ++ G +HA ++
Sbjct: 594 ---------QSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMII 644
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K G + D+ +SNALI Y+KCG +D R F + EK+ VSWN+MI GY +G E
Sbjct: 645 KRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKN---DVSWNAMITGYSQHGYGNE 701
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A LF+ M + GE+PN TF VL A +
Sbjct: 702 AVNLFEKMKQ-------------------------------VGEMPNHVTFVGVLSACSH 730
Query: 464 VASLEKG-------KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
V + KG HG + K + D +++G + +R+ + MP
Sbjct: 731 VGLVTKGLGYFESMSKEHGLVPKPAHY------ACVVDLISRAGFLSRARKFIEEMP 781
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G N T+ +L + SL + K LHGKI+KLGF + L L D Y GD++
Sbjct: 5 GICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGV 64
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+VF+ MP+++ SW ++ G E + ++LF M + +++P E++ SVL ACS
Sbjct: 65 VKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGH 124
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD-----MLSRSGRLSEAEDFINSMPFEPDS 620
+ G++Y + I +G + ++ + +++G + A +++ DS
Sbjct: 125 RI---GIRYAEQIHA--RIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLC-TKDS 178
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
+W +++SG + E A+ E H AG +++S
Sbjct: 179 VSWVAMISG---FSQNGYEEEAIH---LFCEMHTAGIFPTPYVFSS 218
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 306/580 (52%), Gaps = 65/580 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + KHG + + F ++ +++ A + G + G +AL+LF + +G+
Sbjct: 176 LLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPAT 235
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
TFSSI A + LG V L+ ++ +V V NSL
Sbjct: 236 HFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSL------------------ 277
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
LD + + L + RR+FDEMPER+ VS++V+IA Y + RL
Sbjct: 278 -------------LDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 324
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR+M + F ++ +LS SL + G +HA ++ +G+ + + NALID+YSK
Sbjct: 325 FREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSK 384
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG ++ AK F N +++ +SW+A+I
Sbjct: 385 CG----------------------------------MLDAAKSNFSNRSEKSAISWTALI 410
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+GY+++ Q + +F++M +G P+++TFSS++ AS+S+A + G+ LH +I+ G+
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
VF G+ L D YAK G ++ + R FD MP++N ISW ++ A G AK +I +FE M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
P+ +T LSVL ACSH+GL D+ +KYF+ M+ Y+I P HY CV+D L R G
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
S+ + + MPF+ D W S+L C+ + N+++A A L+ + YV+LSNI
Sbjct: 591 FSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNI 650
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA AG+W DA V+K+M ++G+RK G SWVE++ +++ F
Sbjct: 651 YARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSF 690
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/566 (26%), Positives = 256/566 (45%), Gaps = 81/566 (14%)
Query: 83 NGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
GFD++ + N + + + G+L A+ +FD MP +N S ++S + G + +
Sbjct: 37 TGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHL 96
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI--CKACAEIN 198
F +P +N +WT + G + +AL LF +L GV P+ VT +++ C +
Sbjct: 97 FLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS 156
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
L F + F G + HV VCN+L+ K G + AR VF M +D V++ ++
Sbjct: 157 -----LHPFAIKF--GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM- 208
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
MG ++ G +A +LF M R
Sbjct: 209 ----MG--------------------------CSKEGLHTQALQLFAAMRRAGIPATHFT 238
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
FS +L+ A + L G VHA VL+ +VF++N+L+D YSKC D R +FD +
Sbjct: 239 FSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP 298
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
E+D VS+N +I Y N LF M K
Sbjct: 299 ERD---NVSYNVIIAAYAWNQCAATVLRLFREMQKLG----------------------- 332
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F+ +L ++++L + S+ + GK +H +++ LG + LG AL D Y+K
Sbjct: 333 FDRQVLP--------YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSK 384
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G +++++ F +K+ ISWT ++ G ++G +E++ LF +M + + P+ T S+
Sbjct: 385 CGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSI 444
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
+ A S ++ G + +S K + + +VDM ++ G L EA + MP E
Sbjct: 445 IKASSSLAMIGLG-RQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ER 502
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
+S +W +++S Y A+ A+K
Sbjct: 503 NSISWNAVISAYAHYGE---AKNAIK 525
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 188/421 (44%), Gaps = 43/421 (10%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ K GF+ N + L G + AR++FD+M +++ S +IL + GDL A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+ +F P RN +W++M+ + +G +A LFR M P+ + VL+
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGC- 152
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ +H +K G++ VF+ N L+D Y K G R VF + +KD V++N
Sbjct: 153 ----TVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKD---AVTYN 205
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+M+ G G +A +LF M + +G
Sbjct: 206 AMMMGCSKEGLHTQALQLFAAMRR-------------------------------AGIPA 234
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
TFSS+L +A +A L G +H +++ +VF+ +L D Y+K ++ RR+F
Sbjct: 235 THFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLF 294
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
D MP+++ +S+ V++ A + A + LF EM+K L ++L V
Sbjct: 295 DEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVH 354
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE-DFINSMPFEPDSNAWASLLS 628
G K ++ + + ++DM S+ G L A+ +F N E + +W +L++
Sbjct: 355 IG-KQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS--EKSAISWTALIT 411
Query: 629 G 629
G
Sbjct: 412 G 412
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/495 (19%), Positives = 214/495 (43%), Gaps = 77/495 (15%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI----VKDL 82
++ + + L Q L + + GI + + +L + G L +++ ++
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST 266
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ ++ V+N +++ + L++ +RLFD MPER+ VS+ +I+ +
Sbjct: 267 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY-------------- 312
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+W N + L+LF ++ + G + ++++ + D +
Sbjct: 313 --------AW---------NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHI 355
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + G + N+LI + K G +D A+S F ++ +SWT ++ +++
Sbjct: 356 GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQ 415
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+G EEA +LF M R +P+ + FS +
Sbjct: 416 -------------------------------NGQHEEALQLFSDMRRAGLRPDRATFSSI 444
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+ A +SL + G +H+++++ G + VF + L+D+Y+KCG + FD + E++
Sbjct: 445 IKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN- 503
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAV 438
+SWN++I Y G+ + A ++F+ M + V++ ++++ + D
Sbjct: 504 --SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKY 561
Query: 439 FNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
F+ M I P K ++ V+ V + + + ++++ F D + T++ +
Sbjct: 562 FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKM---LVEMPFKADPIIWTSILHSCR 618
Query: 498 KSGDIESSRRVFDRM 512
G+ E +R D++
Sbjct: 619 IHGNQELARVAADKL 633
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 162/356 (45%), Gaps = 14/356 (3%)
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
++ G AQ + G+ + + ALI + K G ++ + F ++ ISWTA I
Sbjct: 352 DVHIGKQIHAQLVLLGLASEDLLG-NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 410
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+VQNG EAL+LF + +G++P+ TFSSI KA + + LG + + ++G++
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
V + L+ + K G +D A FD M +R+ +SW ++ + G+ A ++F+ M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530
Query: 277 PE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKA 331
+ V++ ++A + +G +E + F M +YS P ++ V+ L +
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
V ++++ + D I +++ G + R+ D + + + +
Sbjct: 591 FS---QVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647
Query: 392 IGGYGLNGQMEEA---KELFDN--MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
Y GQ E+A K++ + + K + SW I DL + +E+
Sbjct: 648 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEI 703
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 133/318 (41%), Gaps = 62/318 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
++K +S ++ GR LH +LI++G + + L+ MY
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMY-------------------- 483
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER--- 143
+ G L+EA R FD MPERN +SW A+IS + +G + ++ FE
Sbjct: 484 -----------AKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLH 532
Query: 144 ---NPFQNVISWTAAICGFVQNGFSFEALKLF-LKLLESGVKPNEVTFSSICKACAEIND 199
NP + +++ + + NG + E +K F L + + P + ++ + +
Sbjct: 533 CGFNP--DSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR---MEKRDVVSWTVI 256
F V ++ + F+ + S++ G +LAR D+ ME D + ++
Sbjct: 591 FS---QVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647
Query: 257 LDVFIEMG---DLGEARRIFDEMPERNEVSWS-VMIAR------YNQSGYP------EEA 300
+++ G D ++I + R E +S V I + N P +E
Sbjct: 648 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDEL 707
Query: 301 FRLFRQMTRYSFKPNTSC 318
RL+++M + +KP+ +C
Sbjct: 708 DRLYKEMDKQGYKPDITC 725
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 211/738 (28%), Positives = 370/738 (50%), Gaps = 116/738 (15%)
Query: 11 INPET-SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
+ P+T +F S I C LL +++H ++ G + Y+ L+ MY
Sbjct: 111 LQPDTYTFPSVINACAGLLD-------FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRF 163
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMI---NANIQW-------------------------- 100
+A ++ +++ D+V N +I NAN W
Sbjct: 164 NDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVL 223
Query: 101 ------GNLEEAQRLFDGMPER-----NEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
G++EE + G+ E+ + + L+S + K + + F++ ++
Sbjct: 224 RACGGLGSVEEGD-IIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDA 282
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+SW ICG+ Q G E++KLF++++ KP+ +T +SI +AC + D G V
Sbjct: 283 VSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDY 341
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ +G+E C D + ++++++ + G+L +
Sbjct: 342 MITSGYE-----C--------------------------DTTASNILINMYAKCGNLLAS 370
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+ +F M ++ VSW+ MI Y Q+G +EA +LF+ M + KP++ + ++LS L
Sbjct: 371 QEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQL 429
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G +H + K+G ++ +SN L+D+Y+KC
Sbjct: 430 GDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC------------------------- 464
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
G+M ++ ++F+NM R+ ++W+ II+ + + +L + + M G P
Sbjct: 465 ---------GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTP 515
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ +T S+L + +A+ +GK++HG I KLG DV +G L + Y+K G + +S +VF
Sbjct: 516 DMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF 575
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
M K+ ++WT ++ G K+++ F EME I P+ + ++++FACSHSGLV+
Sbjct: 576 KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVE 635
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+GL YF+ M+ Y I+P HY CVVD+LSRS L +AEDFI SMP +PDS+ W +LLS
Sbjct: 636 EGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 695
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ + +IAER + + +L + YVL+SNIYA+ G+W ++RK + +GL+K
Sbjct: 696 CRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDP 755
Query: 690 GCSWVEVRNQVHFFFQKT 707
GCSW+E++N+V+ F T
Sbjct: 756 GCSWMEIQNKVYVFGTGT 773
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 225/503 (44%), Gaps = 69/503 (13%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+P NV W + I NG EAL L+ + ++P+ TF S+ ACA + DF +
Sbjct: 75 SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
S+ + GF + + N+LI + + ++D AR VF+ M RDVV
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVV------------ 182
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
SW+ +I+ YN +GY EA ++ + P++ S VL
Sbjct: 183 -------------------SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVL 223
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A L ++ G +H + KIGI+KDV ++N L+ +Y K DGR +FD +V +D
Sbjct: 224 RACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD-- 281
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSWN+MI GY G EE+ +LF M QF
Sbjct: 282 -AVSWNTMICGYSQVGLYEESIKLFMEMV-----------------NQFK---------- 313
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
P+ T +S+L A + LE GK +H +I G+ D L + YAK G++
Sbjct: 314 -----PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLL 368
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+S+ VF M K+ +SW M+ ++G E++ LF +M KT + P+ +T + +L +
Sbjct: 369 ASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMST 427
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
G + G + + + N +VDM ++ G + ++ +M D W
Sbjct: 428 QLGDLHLGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITW 485
Query: 624 ASLLSGCKTYKNEQIAERAVKNL 646
++++ C ++ + R + +
Sbjct: 486 NTIIASCVHSEDCNLGLRMISRM 508
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 161/374 (43%), Gaps = 44/374 (11%)
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+ R+ + +R + FS + ALAS +H+ ++ +G+ V S LI
Sbjct: 2 KTLRVLHECSRQTL------FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLI 55
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
Y+ + VF + +V WNS+I NG EA
Sbjct: 56 AKYAHFRDPTSSFSVFR--LASPSNNVYLWNSIIRALTHNGLFSEA-------------- 99
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
+S Y E ++ L P+ TF SV+ A A + E K +H +++
Sbjct: 100 ----LSLYSETQRIRLQ-------------PDTYTFPSVINACAGLLDFEMAKSIHDRVL 142
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+GF D+++G AL D Y + D++ +R+VF+ MP ++ +SW ++ G +GY E++
Sbjct: 143 DMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE 202
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
++ + P+ T+ SVL AC G V++G +E I IK + ++ M
Sbjct: 203 IYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI-GIKKDVIVNNGLLSMY 261
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
+ L + + M D+ +W +++ G Y + E ++K ++ + +
Sbjct: 262 CKFNGLIDGRRIFDKMVLR-DAVSWNTMICG---YSQVGLYEESIKLFMEMVNQFKPDLL 317
Query: 659 LLSNIYASAGRWID 672
+++I + G D
Sbjct: 318 TITSILQACGHLGD 331
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 27/261 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ +HG + K G+ + + L+ MY + ++ K + D+V +I+A
Sbjct: 535 QGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACG 594
Query: 99 QWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFER----NPFQNVI 150
+G ++A R F M + V++ A+I G VEE + YF R + I
Sbjct: 595 MYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRI 654
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
A + + + + F +L +KP+ + ++ AC D + V I
Sbjct: 655 EHYACVVDLLSRSALLDKAEDF--ILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERI 712
Query: 211 FKAGFEK---HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV-----VSWTVILD-VFI 261
+ + +V V N + +G+ D RS+ ++ R + SW I + V++
Sbjct: 713 IELNPDDTGYYVLVSN----IYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYV 768
Query: 262 EMGDLGEARRIFDEMPERNEV 282
G + F++ E N++
Sbjct: 769 ----FGTGTKFFEQFEEVNKL 785
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 327/673 (48%), Gaps = 127/673 (18%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG+ +KTG+ ++ + LL MY +
Sbjct: 135 GELLHGYAVKTGLVNSVFVGSALLDMYTKN------------------------------ 164
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + E +R+F MP RN VSWTA+I+G
Sbjct: 165 -GKIFEGRRVFHEMPMRNVVSWTAIITG-------------------------------L 192
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
V+ G++ EAL F ++ S V+ + TF+ KACA+ G + K GF+
Sbjct: 193 VRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSS 252
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N+L T+ K G+++ ++F++M RDVVSWT I+ ++MG
Sbjct: 253 FVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQ-------------- 298
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
E A + F +M PN F+ V+S A+L + G +H
Sbjct: 299 -----------------EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLH 341
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
A +L +G+ + + N+++ +Y+KCG+ ++F + +D +VSW+++I GY G
Sbjct: 342 ALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRD---IVSWSTIIAGYSQGG 398
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+ EA EL +SW M + G P + +SVL
Sbjct: 399 HVSEAFEL---------LSW----------------------MRMEGPKPTEFALASVLS 427
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A ++A LE GK LH ++ +G + + +AL + Y K G IE + R+FD + + +S
Sbjct: 428 ACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVS 487
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
WT M+ G AE GY++E I+LFE++ + + P+ +T + VL ACSH+GLVD G +YFN+M
Sbjct: 488 WTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMS 547
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y I P+ HY C++D+L R+GRLS+AE I +MPF D W++LL C+ + + +
Sbjct: 548 KKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERG 607
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
R + + +L ++ L+NIYAS G+W +A ++RKLM KG+ K G SW++V++
Sbjct: 608 RRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDL 667
Query: 700 VHFFFQKTDHNPK 712
V F +P+
Sbjct: 668 VFAFVAGDRSHPQ 680
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 284/520 (54%), Gaps = 40/520 (7%)
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-----RDVVS 252
+D GL LI + ++ + L+ ++G+V+ R V + +V
Sbjct: 66 SDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVL 125
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
+I++++ + G L +ARR+FDEMP ++ V+W+ +IA ++Q+ P +A LF QM R
Sbjct: 126 QNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGL 185
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+PN S +L A S L G +HA LK G + V++ +AL+D+Y++CG
Sbjct: 186 QPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCG------- 238
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
M+ A+ FD MP +++VSW+A+ISG+ +
Sbjct: 239 ---------------------------HMDAAQLAFDGMPTKSEVSWNALISGHARKGEG 271
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+ + +M P T+SSV A AS+ +LE+GK +H +IK G F+G L
Sbjct: 272 EHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTL 331
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK+G I+ ++RVFDR+ + +SW M+ G A+ G KE+++ FE+M + I PNE
Sbjct: 332 LDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNE 391
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
++ L VL ACSHSGL+D+GL YF M+ Y ++P+ HY VD+L R G L AE FI
Sbjct: 392 ISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERFIR 450
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
MP EP + W +LL C+ +KN ++ A + ++L +LLSNIYASAGRW D
Sbjct: 451 EMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRD 510
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VRK+M E G++K CSWVE+ N VH F + +P+
Sbjct: 511 VAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQ 550
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 194/395 (49%), Gaps = 45/395 (11%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
++ +V D N + ++ C ++ G + A + + + V +++ + K G
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
++++ F+ P +++++WTA I GF QN +AL LF ++L G++PN T SS+ K
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
A + G + K G++ V V ++L+
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALV-------------------------- 231
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
D++ G + A+ FD MP ++EVSW+ +I+ + + G E A L +M R +F
Sbjct: 232 -----DMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNF 286
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+P +S V SA AS+ AL G VHAH++K G++ FI N L+D+Y+K G D +
Sbjct: 287 QPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKR 346
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAII----- 423
VFD +V+ D VVSWN+M+ G +G +E + F+ M + N++S+ ++
Sbjct: 347 VFDRLVKPD---VVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSH 403
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
SG L+ + F + + + ++P+ TF +L
Sbjct: 404 SGLLDEGLY--YFELMKKYKVEPDVPHYVTFVDLL 436
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 143/377 (37%), Gaps = 97/377 (25%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK S++ + G LH +K G Y+ + L+ MY
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMY-------------------- 234
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G+++ AQ FDGMP ++EVSW ALISG + G E
Sbjct: 235 -----------ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE----------- 272
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
AL L K+ +P T+SS+ ACA I G V
Sbjct: 273 --------------------HALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWV 312
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K+G + + N+L+ + K G +D A+ VFDR+ K DVVS
Sbjct: 313 HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVS-------------- 358
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
W+ M+ Q G +E F QM R +PN F VL+A
Sbjct: 359 -----------------WNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTAC 401
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG-ETKDGRLVFDSIVEKDVAHV 385
+ L G++ + K +E DV +DL + G + R + + +E A
Sbjct: 402 SHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA-- 459
Query: 386 VSWNSMIGGYGLNGQME 402
W +++G ++ ME
Sbjct: 460 -VWGALLGACRMHKNME 475
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 219/711 (30%), Positives = 349/711 (49%), Gaps = 101/711 (14%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ + A+R+FD MP R+ VSW +++ + G + ++ F+ P +
Sbjct: 54 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW A + G+ Q G E++ LF+++ GV P+ TF+ + K+C+ + + LG+ V
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI------------ 256
L K G E V ++L+ + K +D A F M +R+ VSW
Sbjct: 174 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVR 233
Query: 257 -LDVFIEMGDLG---------EARRIFDEMPERN-----------------EVSWSVMIA 289
L++FIEM LG A R M N V + ++
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVD 293
Query: 290 RYNQSGYPEEAFRLFRQ-----------------MTRYSFKPNTSCFSIVLSALASLKAL 332
Y ++ +A R F M R S + + S V SA A K
Sbjct: 294 VYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGY 353
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G VH +K +++DLY KC + L+F + +KD VSWN++I
Sbjct: 354 FPGQQVHCLAIK-----------SVLDLYGKCKALMEAYLIFQGMKQKD---SVSWNAII 399
Query: 393 GGYGLNGQ-------------------------------MEEAKELFDNMPKRNDVSWSA 421
NG ++EA++L D + + VSW+A
Sbjct: 400 AALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNA 459
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
I+SG+ +K+ + F+EML G P+ TF++VL A++A++E GK +HG+IIK
Sbjct: 460 ILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQE 519
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D ++ + L D YAK GD+ S VF+++ ++ +SW M+ G A G E++ +FE
Sbjct: 520 MLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFE 579
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M+K ++ PN T ++VL ACSH GL D G +YF+ M Y ++P H+ C+VD+L RS
Sbjct: 580 RMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRS 639
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
EA FINSMPF+ D+ W +LLS CK ++ +IAE A N+ L + + Y+LLS
Sbjct: 640 KGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLS 699
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+YA +G+W D R+L+ + L+K GCSW+E ++++H F +P+
Sbjct: 700 NVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEAQSEMHGFLVGDKAHPR 750
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 212/457 (46%), Gaps = 73/457 (15%)
Query: 180 VKPNEVTFSSICKACAEIN--DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
V P VTFS + ++CA+ G + + +GF V N L+ + +
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAAC 70
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR VFD M +RD VSW +L + GD+ A +FD MP+ + VSW+ +++ Y Q G
Sbjct: 71 ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 130
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+E+ LF +M R P+ + F+++L + ++L+ L G+ VHA +K G+E DV +AL
Sbjct: 131 QESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSAL 190
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+Y KC D F YG MP+RN V
Sbjct: 191 VDMYGKCRSLDDALCFF--------------------YG--------------MPERNWV 216
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW + I+G ++++Q+ +F EM G ++ +++S + A+++ L G+ LH
Sbjct: 217 SWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F D +GTA+ D YAK+ + +RR F +P+ + M+ GL
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLF--------- 327
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC---- 593
M ++SI + +++ V AC+ + KG YF G+ C
Sbjct: 328 -----MIRSSIRFDVVSLSGVFSACAET----KG--YF-----------PGQQVHCLAIK 365
Query: 594 -VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
V+D+ + L EA M + DS +W ++++
Sbjct: 366 SVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 401
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 156/373 (41%), Gaps = 81/373 (21%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA--------NEIVKDLNG------- 84
GR LH H IK +R + T ++ +Y + +A N V+ N
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFM 328
Query: 85 ------FDLV--------------------VHNCMINANIQ-WGN---LEEAQRLFDGMP 114
FD+V VH I + + +G L EA +F GM
Sbjct: 329 IRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMK 388
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYF-------------------------------ER 143
+++ VSW A+I+ ++G ++++ +F +R
Sbjct: 389 QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDR 448
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
Q V+SW A + GF N S A K F ++L+ G+KP+ TF+++ CA + LG
Sbjct: 449 IGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELG 508
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G I K + ++L+ + K G++ + VF+++EKRD VSW ++ +
Sbjct: 509 KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALH 568
Query: 264 GDLGEARRIFDEMPERNEV----SWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSC 318
G EA R+F+ M + N V ++ ++ + G ++ R F M T Y +P
Sbjct: 569 GLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEH 628
Query: 319 FSIVLSALASLKA 331
F+ ++ L K
Sbjct: 629 FACMVDILGRSKG 641
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 319/585 (54%), Gaps = 43/585 (7%)
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
R E ++ + ++P ++ + + + + G + L LF +L E G+ P+ T+ + K
Sbjct: 194 RYAEKIFNYVQDP--SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLK 251
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
A + D R G V G I K G + V NSLI
Sbjct: 252 AIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLI-------------------------- 285
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-S 311
D++ E+ ++ A+++FDEM R+ VSW+VMI+ Y + E+A FR+M + +
Sbjct: 286 -----DMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGN 340
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDG 370
KP+ + LSA +LK L G +H +V K +G I NAL+D+Y+KCG
Sbjct: 341 EKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR--IDNALLDMYAKCGCLNIA 398
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
R +FD E + +V+ W SMI GY G + EA++LFD P R+ V W+A+I+GY++
Sbjct: 399 RNIFD---EMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 455
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
FD A+F EM + P+K T ++L A + +LE+GK +HG + + DV +GT
Sbjct: 456 HFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 515
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL + Y+K G ++ S +F + DK+ SWT ++ GLA +G E++ LF EME+ P
Sbjct: 516 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKP 575
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+++T + VL ACSH GLV++G ++FNSM+ ++ I+P HY CV+D+L R+G L EAE+
Sbjct: 576 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEEL 635
Query: 611 INSMPFEPDS---NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
I +P E + +LLS C+ + N + ER K L + + + LL+NIYAS
Sbjct: 636 IQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASV 695
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
RW DA VR+ M E G++K GCS +EV VH F +P+
Sbjct: 696 DRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPE 740
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 191/404 (47%), Gaps = 71/404 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK I V QG + G ++KTG+ + Y
Sbjct: 249 VLKAIGCLRDVRQGEKVRGFIVKTGMDLDNY----------------------------- 279
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V+N +I+ + N+E A++LFD M R+ VSW +ISG+++ R E+++ N F
Sbjct: 280 --VYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAI-----NTF 332
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ + E KP+E T S AC + + LG +
Sbjct: 333 REMQQ-------------------------EGNEKPDEATVVSTLSACTALKNLELGDEI 367
Query: 207 FGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ K GF + N+L+ + K G +++AR++FD M ++V+ WT ++ +I GD
Sbjct: 368 HNYVRKELGFTTRID--NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGD 425
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L EAR +FD+ P R+ V W+ MI Y Q + ++A LFR+M KP+ +L+
Sbjct: 426 LREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTG 485
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L AL G +H ++ + I DV + ALI++YSKCG +F + +KD A
Sbjct: 486 CAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTA-- 543
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISG 425
SW S+I G +NG+ EA LF M K +D+++ ++S
Sbjct: 544 -SWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSA 586
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 188/415 (45%), Gaps = 71/415 (17%)
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
RD ++ + +G+L A +IF+ + + + ++VM+ Y + G + LF+Q+
Sbjct: 175 RDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQL 234
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
P+ + VL A+ L+ +R G V ++K G++ D ++ N+LID+Y +
Sbjct: 235 REDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNV 294
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
++ + +FD + +D VSWN MI SGY+
Sbjct: 295 ENAKKLFDEMTTRD---SVSWNVMI-------------------------------SGYV 320
Query: 428 EHKQFDLVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYD 485
++F+ F EM G E P+++T S L A ++ +LE G ++H + K LGF
Sbjct: 321 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR 380
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE---------- 535
+ AL D YAK G + +R +FD M KN I WT M+ G G +E
Sbjct: 381 I--DNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPV 438
Query: 536 ---------------------SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ LF EM+ + P++ T++++L C+ G +++G K+
Sbjct: 439 RDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQG-KW 497
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ I + T +++M S+ G + ++ + + + D+ +W S++ G
Sbjct: 498 IHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELE-DKDTASWTSIICG 551
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 132/257 (51%), Gaps = 6/257 (2%)
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
N + K+L GF + N +++ + G L A+ +FD M +N + WT++ISG++ G +
Sbjct: 369 NYVRKEL-GFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLR 427
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
E+ F+++P ++V+ WTA I G+VQ +A+ LF ++ VKP++ T ++ CA
Sbjct: 428 EARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCA 487
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
++ G + G + + V V +LI + K G VD + +F +E +D SWT
Sbjct: 488 QLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTS 547
Query: 256 ILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-Y 310
I+ G EA R+F EM + +++++ +++ + G EE R F M + +
Sbjct: 548 IICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVH 607
Query: 311 SFKPNTSCFSIVLSALA 327
+P + V+ L
Sbjct: 608 RIEPKVEHYGCVIDLLG 624
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 316/573 (55%), Gaps = 47/573 (8%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFE-ALKLFLKLLESGVKPNEVTFSSI---CKACAEIND 199
P+ N+ + I GF FS E A ++ +L++G P+ TF + K AE+
Sbjct: 27 TPYPNLYIFNTMILGF---PFSNEKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVKQ 83
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
VFGL+ K + + NSLI KR
Sbjct: 84 IHCHALVFGLLSKEEYLR-----NSLI--------------------KR----------- 107
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+++ G AR++FDEM +RN VS++ MI + + G LF M + +P+
Sbjct: 108 YVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTM 167
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+L L + G VHA + K ++ + NAL+D+Y KC E K R VFD +E
Sbjct: 168 LGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPME 227
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
KD VSWN++I GY G++E A +LF+ +P R+ VSW+++ISGY ++ + V +F
Sbjct: 228 KDT---VSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLF 284
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M P+K T +++ A A + +L++G+ +HG +K+ + F G+AL D Y K
Sbjct: 285 TRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKC 344
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G IE + +F+++P+K+ +WT M+ G A G+ +++ LF M+ + PN++T +SVL
Sbjct: 345 GSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAET-KPNDVTFVSVL 403
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSHSGLVD+GLK F+SM+ Y+I+P HY C+VD+L RSGRL +A I MP EP
Sbjct: 404 AACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPS 463
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ W ++LS C+ ++N ++AERA+ L KL E GY+LLSN+YA+ GRW + ++R++
Sbjct: 464 RSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREV 523
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
M +G++K GCS V V VH F +P+
Sbjct: 524 MNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPR 556
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 179/334 (53%), Gaps = 6/334 (1%)
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
G+ + E +LI ++ +G E + F+ +NV+S+ I GF + G L+L
Sbjct: 92 GLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILEL 151
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
F + G++P++ T + C ++ + +LG SV I K+ ++ + N+L+ + +K
Sbjct: 152 FHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVK 211
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
E+ LAR VFD ++D VSW I+ + ++G+L A +F+++P R+ VSW+ +I+ Y
Sbjct: 212 CNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGY 271
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q+G LF +M + KP+ ++SA+A + AL G +H +K+ + +
Sbjct: 272 AQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEA 331
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
F +ALID+Y KCG + ++F+ I EKDV +W +MI G+ +G +A ELF M
Sbjct: 332 FSGSALIDMYCKCGSIERAFVIFNQIPEKDVT---TWTTMITGFAFHGFGNKALELFSVM 388
Query: 412 ---PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
K NDV++ ++++ D +F+ M
Sbjct: 389 QAETKPNDVTFVSVLAACSHSGLVDEGLKIFSSM 422
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
KS+ A +I K + +L+++N +++ ++ L+ A+++FDG E++ VSW +I+G+ K
Sbjct: 184 KSVHA-QIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAK 242
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G +E + F + P ++++SW + I G+ QNG LF ++ VKP++VT ++
Sbjct: 243 VGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNL 302
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
A AE+ G + GL K + ++LI + K G ++ A +F+++ ++DV
Sbjct: 303 ISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDV 362
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEM---PERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
+WT ++ F G +A +F M + N+V++ ++A + SG +E ++F M
Sbjct: 363 TTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEGLKIFSSM 422
Query: 308 -TRYSFKPNTSCFSIVLSALASLKALRSG 335
RYS +P + ++ L RSG
Sbjct: 423 KKRYSIEPGVEHYGCLVDLLC-----RSG 446
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 316/573 (55%), Gaps = 47/573 (8%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFE-ALKLFLKLLESGVKPNEVTFSSI---CKACAEIND 199
P+ N+ + I GF FS E A ++ +L++G P+ TF + K AE+
Sbjct: 92 TPYPNLYIFNTMILGF---PFSNEKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVKQ 148
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
VFGL+ K + + NSLI KR
Sbjct: 149 IHCHALVFGLLSKEEYLR-----NSLI--------------------KR----------- 172
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+++ G AR++FDEM +RN VS++ MI + + G LF M + +P+
Sbjct: 173 YVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTM 232
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+L L + G VHA + K ++ + NAL+D+Y KC E K R VFD +E
Sbjct: 233 LGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPME 292
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
KD VSWN++I GY G++E A +LF+ +P R+ VSW+++ISGY ++ + V +F
Sbjct: 293 KDT---VSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLF 349
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M P+K T +++ A A + +L++G+ +HG +K+ + F G+AL D Y K
Sbjct: 350 TRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKC 409
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G IE + +F+++P+K+ +WT M+ G A G+ +++ LF M+ + PN++T +SVL
Sbjct: 410 GSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAET-KPNDVTFVSVL 468
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSHSGLVD+GLK F+SM+ Y+I+P HY C+VD+L RSGRL +A I MP EP
Sbjct: 469 AACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPS 528
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ W ++LS C+ ++N ++AERA+ L KL E GY+LLSN+YA+ GRW + ++R++
Sbjct: 529 RSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREV 588
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
M +G++K GCS V V VH F +P+
Sbjct: 589 MNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPR 621
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 179/334 (53%), Gaps = 6/334 (1%)
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
G+ + E +LI ++ +G E + F+ +NV+S+ I GF + G L+L
Sbjct: 157 GLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILEL 216
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
F + G++P++ T + C ++ + +LG SV I K+ ++ + N+L+ + +K
Sbjct: 217 FHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVK 276
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
E+ LAR VFD ++D VSW I+ + ++G+L A +F+++P R+ VSW+ +I+ Y
Sbjct: 277 CNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGY 336
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q+G LF +M + KP+ ++SA+A + AL G +H +K+ + +
Sbjct: 337 AQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEA 396
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
F +ALID+Y KCG + ++F+ I EKDV +W +MI G+ +G +A ELF M
Sbjct: 397 FSGSALIDMYCKCGSIERAFVIFNQIPEKDVT---TWTTMITGFAFHGFGNKALELFSVM 453
Query: 412 ---PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
K NDV++ ++++ D +F+ M
Sbjct: 454 QAETKPNDVTFVSVLAACSHSGLVDEGLKIFSSM 487
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 141/261 (54%), Gaps = 5/261 (1%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
KS+ A +I K + +L+++N +++ ++ L+ A+++FDG E++ VSW +I+G+ K
Sbjct: 249 KSVHA-QIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAK 307
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G +E + F + P ++++SW + I G+ QNG LF ++ VKP++VT ++
Sbjct: 308 VGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNL 367
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
A AE+ G + GL K + ++LI + K G ++ A +F+++ ++DV
Sbjct: 368 ISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDV 427
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEM---PERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
+WT ++ F G +A +F M + N+V++ ++A + SG +E ++F M
Sbjct: 428 TTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFVSVLAACSHSGLVDEGLKIFSSM 487
Query: 308 -TRYSFKPNTSCFSIVLSALA 327
RYS +P + ++ L
Sbjct: 488 KKRYSIEPGVEHYGCLVDLLC 508
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/592 (34%), Positives = 311/592 (52%), Gaps = 64/592 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+L+ +MK VE+ F+ +NV+SWT+ + G+ QNG + +ALKLF ++ G+K
Sbjct: 131 TSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIK 190
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN TF+++ A G+ V ++ K+G + + V NS++ + K V A++V
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD ME R+ VSW + MIA + +G EAF
Sbjct: 251 FDSMENRNAVSW-------------------------------NSMIAGFVTNGLDLEAF 279
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF +M K + F+ V+ A++K + +H V+K G + D+ I AL+ Y
Sbjct: 280 ELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAY 339
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKC E D +F + V +VVSW ++I GY NG+ + A LF M + V
Sbjct: 340 SKCSEIDDAFKLF--CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVE--- 394
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS-VASLEKGKDLHGKIIKL 480
PN+ TFSSVL A A+ AS+E+GK H IK
Sbjct: 395 ---------------------------PNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS 427
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF + + +AL YAK G+IES+ VF R D++ +SW M+ G A+ G K+S+ +F
Sbjct: 428 GFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIF 487
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EEM ++ + +T + V+ AC+H+GLV++G +YF+ M Y+I P HY+C+VD+ SR
Sbjct: 488 EEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSR 547
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G L +A D IN MPF + W +LL+ C+ + N Q+ E A + L L + A YVLL
Sbjct: 548 AGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLL 607
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SNIYA+AG W + VRKLM K ++K G SW+EV+N+ F +P+
Sbjct: 608 SNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQ 659
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 167/401 (41%), Gaps = 77/401 (19%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
++++FDE P++ + ++ ++++ +EA LF + R + S S VL
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L G VH +K G +DV + +L+D+Y K +DG VF
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVF-------------- 150
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
D M +N VSW+++++GY ++ + +F++M L G
Sbjct: 151 --------------------DEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIK 190
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN TF++VL A+ ++EKG +H +IK G +F+G ++ + Y+KS + ++ V
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC------ 562
FD M ++N +SW M+ G +G E+ LF M + + +V+ C
Sbjct: 251 FDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEM 310
Query: 563 -----------------------------SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
S +D K F M + N+ +T
Sbjct: 311 SFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVS----WTA 366
Query: 594 VVDMLSRSGRLSEAEDFINSM----PFEPDSNAWASLLSGC 630
++ ++GR A + M EP+ ++S+L+ C
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNAC 407
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 175/393 (44%), Gaps = 68/393 (17%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE-RNEVSWTALISGFMKHGRVE 135
+++K+ + FDL + ++ A + +++A +LF M +N VSWTA+ISG++++GR +
Sbjct: 319 QVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTD 378
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKAC 194
+M LF ++ E GV+PNE TFSS+ AC
Sbjct: 379 RAM-------------------------------NLFCQMRREEGVEPNEFTFSSVLNAC 407
Query: 195 AE-INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
A G K+GF + V ++L+T+ K G ++ A VF R RD+VSW
Sbjct: 408 AAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSW 467
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
++ + + G ++ +IF+EM +N +++ +I+ +G E R F M +
Sbjct: 468 NSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK 527
Query: 310 -YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI--DLYSKC-- 364
Y P +S ++ + R+GM A L I K F + A I L + C
Sbjct: 528 DYHIVPTMEHYSCMVDLYS-----RAGMLEKAMDL---INKMPFPAGATIWRTLLAACRV 579
Query: 365 ------GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
GE +L+ S+ +D A V +++ G + + ++L D + +
Sbjct: 580 HLNVQLGELAAEKLI--SLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAG 637
Query: 419 WSAI---------ISGYLEHKQFDLVFAVFNEM 442
+S I ++G L H Q D ++ E+
Sbjct: 638 YSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEEL 670
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 42/215 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVH-NCMINANI 98
+ LH +IK G + + T L++ Y + +A ++ ++G VV +I+ +
Sbjct: 313 AKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYV 372
Query: 99 QWGNLEEAQRLFDGMP-----ERNEVSWT------------------------------- 122
Q G + A LF M E NE +++
Sbjct: 373 QNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNA 432
Query: 123 -----ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
AL++ + K G +E + F+R ++++SW + I G+ Q+G ++LK+F ++
Sbjct: 433 LCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRS 492
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
++ + +TF + AC G F L+ K
Sbjct: 493 KNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK 527
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F+S + C + QG+ H IK+G +++ L+ MY R ++
Sbjct: 397 EFTFSSVLNACAAPTASVE------QGKQFHSCSIKSGFSNALCVSSALVTMY-AKRGNI 449
Query: 74 E-ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN----EVSWTALISGF 128
E ANE+ K DLV N MI+ Q G +++ ++F+ M +N +++ +IS
Sbjct: 450 ESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISAC 509
Query: 129 MKHGRVEESMWYFE 142
G V E YF+
Sbjct: 510 THAGLVNEGQRYFD 523
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 218/707 (30%), Positives = 340/707 (48%), Gaps = 134/707 (18%)
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
+ I+K DLV+ N ++N + G+L++A++ FD M R+
Sbjct: 104 DHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRS------------------ 145
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
V+SWT I G+ QNG +A+ +++++L SG P+++TF SI KAC
Sbjct: 146 -------------VVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACC 192
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
D LG + G + K+G++ H+ N+LI++ K G++ A VF + +D++SW
Sbjct: 193 IAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWAS 252
Query: 256 ILDVFIEMGDLGEARRIFDEM-------------------------PE------------ 278
++ F ++G EA +F +M PE
Sbjct: 253 MITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKF 312
Query: 279 ---RNEVSWSVMIARYNQSGYPEEAFRLFRQ----------------------------- 306
RN + + Y + G+ A R F Q
Sbjct: 313 GLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDVNEAIYFFC 372
Query: 307 -MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M P+ F +L A S L GM +H++++K+G++K + N+L+ +Y+KC
Sbjct: 373 QMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCS 432
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
D VF I E ++VSWN AI+S
Sbjct: 433 NLHDAFNVFKDISEN--GNLVSWN-------------------------------AILSA 459
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
+HKQ F +F ML S P+ T +++L A + SLE G +H +K G D
Sbjct: 460 CSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVD 519
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
V + L D YAK G ++ +R VFD + + +SW+ ++ G A+ G +E++NLF M
Sbjct: 520 VSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRN 579
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ PNE+T L VL ACSH GLV++G +N+ME I P H +C+VD+L+R+G L
Sbjct: 580 LGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLY 639
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EAE+FI F+PD W +LL+ CKT+ N IAERA +N+ KL + A VLLSNI+A
Sbjct: 640 EAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHA 699
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SAG W + +R LM + G++K G SW+EV++Q+H FF + +P+
Sbjct: 700 SAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQ 746
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 226/517 (43%), Gaps = 71/517 (13%)
Query: 200 FRLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR----DVVSWT 254
+R L F K + + S +LI + + + + D + K D+V
Sbjct: 60 YREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQN 119
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
IL+++ + G L +AR+ FD M R+ VSW++MI+ Y+Q+G +A ++ QM R + P
Sbjct: 120 HILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFP 179
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ F ++ A + G +H HV+K G + + NALI +Y+K G+ VF
Sbjct: 180 DQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVF 239
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
I KD ++SW SMI G+ G EA LF +M ++
Sbjct: 240 TMISTKD---LISWASMITGFTQLGYEIEALYLFRDMFRQ-------------------- 276
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
V+ PN+ F SV A S+ E G+ + G K G +VF G +L D
Sbjct: 277 --GVYQ--------PNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCD 326
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G + S++R F ++ + +SW ++ LA S E+I F +M + P+++T
Sbjct: 327 MYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSD-VNEAIYFFCQMIHMGLMPDDIT 385
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD----MLSRSGRLSEAEDF 610
L++L AC +++G++ + Y IK V + M ++ L +A +
Sbjct: 386 FLNLLCACGSPMTLNQGMQIHS-----YIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNV 440
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
+ + +W ++LS C +K A R K L +E P + ++ I +
Sbjct: 441 FKDISENGNLVSWNAILSACSQHKQPGEAFRLFK-LMLFSENKPDN-ITITTILGTCAEL 498
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+ +EV NQVH F K+
Sbjct: 499 VS---------------------LEVGNQVHCFSVKS 514
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 161/359 (44%), Gaps = 38/359 (10%)
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR-QMTRYSFKPNTSCFSIVLSALASLKA 331
+D E+S + I + + EA F + S + S + ++ A ++++
Sbjct: 36 YDTNYHGGELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRS 95
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L+ G +H H+LK + D+ + N ++++
Sbjct: 96 LKYGKRIHDHILKSNCQPDLVLQNHILNM------------------------------- 124
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
YG G +++A++ FD M R+ VSW+ +ISGY ++ Q + ++ +ML SG P++
Sbjct: 125 ---YGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQ 181
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF S++ A ++ G LHG +IK G+ + + AL Y K G I + VF
Sbjct: 182 LTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTM 241
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI-TPNELTILSVLFACSHSGLVDK 570
+ K+ ISW M+ G + GY E++ LF +M + + PNE SV AC S L +
Sbjct: 242 ISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSAC-RSLLKPE 300
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ M + + N + DM ++ G L A+ + PD +W ++++
Sbjct: 301 FGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE-SPDLVSWNAIIAA 358
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 314/591 (53%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TA + + K R+ ++ F P S+ A I G+ + +AL++F L + +
Sbjct: 278 TATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLS 337
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+E++ S AC+ I G+ + GL K G ++ V N+
Sbjct: 338 FDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANT----------------- 380
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
ILD++ + G L EA IFD+M R+ VSW+ +IA + Q+ +
Sbjct: 381 --------------ILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF M R + +P+ + V+ A A +AL GM +H ++K G+ D F+ +AL+D+Y
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMY 486
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG + EA+++ D + ++ VSW++
Sbjct: 487 GKCG----------------------------------MLMEAEKIHDRLEEKTTVSWNS 512
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IISG+ KQ + F++ML G IP+ T+++VL A++A++E GK +H +I+KL
Sbjct: 513 IISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLN 572
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV++ + L D Y+K G+++ SR +F++ P ++ ++W+ M+ A G+ +++I LFE
Sbjct: 573 LHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFE 632
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM+ ++ PN +SVL AC+H G VDKGL YF M+ Y + P+ HY+C+VD+L RS
Sbjct: 633 EMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRS 692
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
+++EA I SM FE D W +LLS CK N ++AE+A +L +L + + YVLL+
Sbjct: 693 DQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLA 752
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+YA+ G W + +R +M L+K GCSW+EVR++VH F +P+
Sbjct: 753 NVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPR 803
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 267/569 (46%), Gaps = 77/569 (13%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ V NC++ + N+ A ++FD MP R+ +SW +I G+ + G + + F+ P
Sbjct: 41 IYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPE 100
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW + + ++ NG + +++++F+++ + + TFS + KAC+ I D+ LGL V
Sbjct: 101 RDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQV 160
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
L + GFE DVV+ + ++D++ + L
Sbjct: 161 HCLAIQMGFEN-------------------------------DVVTGSALVDMYSKCKKL 189
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A RIF EMPERN V WS +IA Y Q+ E +LF+ M + + S ++ V +
Sbjct: 190 DGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSC 249
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L A + G +H H LK D I A +D+Y+KC D VF+++
Sbjct: 250 AGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ--- 306
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
S+N++I GY Q +A E+F ++ + + F+E+ LSG
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQR---------------------TYLSFDEISLSG 345
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
L A + + +G LHG +K G +++ + + D Y K G + +
Sbjct: 346 ----------ALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEAC 395
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+FD M ++ +SW ++ ++ ++++LF M ++++ P++ T SV+ AC+
Sbjct: 396 TIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQ 455
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHY-----TCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
++ G ME I +G + +VDM + G L EAE + + E +
Sbjct: 456 ALNYG------MEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE-EKTTV 508
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLA 650
+W S++SG + K + A+R + ++
Sbjct: 509 SWNSIISGFSSQKQSENAQRYFSQMLEMG 537
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 226/466 (48%), Gaps = 60/466 (12%)
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
TFS I + C+ + G + F + V N L+ K ++ A VFDRM
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
RDV+SW ++ + E+G++G A+ +FD MPER+ VSW+ +++ Y +G ++ +F
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
+M + + FS+VL A + ++ G+ VH +++G E DV +AL+D+YSKC
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ +F + E++ +V W+++I GY N + E +L
Sbjct: 188 KLDGAFRIFREMPERN---LVCWSAVIAGYVQNDRFIEGLKL------------------ 226
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
F +ML G ++ST++SV + A +++ + G LHG +K F YD
Sbjct: 227 -------------FKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYD 273
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+GTA D YAK + + +VF+ +P+ S+ ++ G A +++ +F+ +++
Sbjct: 274 SIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQR 333
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC-----------V 594
T ++ +E+++ L ACS V KG + I+ +G C +
Sbjct: 334 TYLSFDEISLSGALTACS----VIKG--------HLEGIQLHGLAVKCGLGFNICVANTI 381
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+DM + G L EA + M D+ +W ++++ + +NE+I +
Sbjct: 382 LDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAAHE--QNEEIVK 424
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/559 (22%), Positives = 248/559 (44%), Gaps = 101/559 (18%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V + +++ + L+ A R+F MPERN V W+A+I+
Sbjct: 172 DVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIA------------------- 212
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
G+VQN E LKLF +L+ G+ ++ T++S+ ++CA ++ F+LG
Sbjct: 213 ------------GYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQ 260
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G K+ F D + T LD++ +
Sbjct: 261 LHGHALKSDF-------------------------------AYDSIIGTATLDMYAKCDR 289
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ +A ++F+ +P S++ +I Y + +A +F+ + R + S L+A
Sbjct: 290 MSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTA 349
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ +K G+ +H +K G+ ++ ++N ++D+Y KCG + +FD + +D
Sbjct: 350 CSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRD---A 406
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN AII+ + ++++ ++F ML S
Sbjct: 407 VSWN-------------------------------AIIAAHEQNEEIVKTLSLFVSMLRS 435
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P+ T+ SV+ A A +L G ++HG+I+K G D F+G+AL D Y K G + +
Sbjct: 436 TMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEA 495
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
++ DR+ +K +SW ++ G + ++ + F +M + + P+ T +VL C++
Sbjct: 496 EKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANM 555
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
++ G K ++ N+ + + +VDM S+ G + ++ P + D W++
Sbjct: 556 ATIELG-KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP-KRDYVTWSA 613
Query: 626 LLSGCKTYKNEQIAERAVK 644
++ Y E+A+K
Sbjct: 614 MICA---YAYHGHGEQAIK 629
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 197/452 (43%), Gaps = 102/452 (22%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF++ V N +++ + G L EA +FD M R+ VS
Sbjct: 372 GFNICVANTILDMYGKCGALVEACTIFDDMERRDAVS----------------------- 408
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
W A I QN + L LF+ +L S ++P++ T+ S+ KACA G
Sbjct: 409 --------WNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG 460
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ + G I K+G MG D + ++D++ +
Sbjct: 461 MEIHGRIVKSG-----------------MG--------------LDWFVGSALVDMYGKC 489
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G L EA +I D + E+ VSW+ +I+ ++ E A R F QM P+ ++ VL
Sbjct: 490 GMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVL 549
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A++ + G +HA +LK+ + DV+I++ L+D+YSKCG +D RL+F+ ++D
Sbjct: 550 DVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRD-- 607
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V+W++MI Y +G E+A +LF+ EM
Sbjct: 608 -YVTWSAMICAYAYHGHGEQAIKLFE-------------------------------EMQ 635
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHG-KIIKLGFPYDVFLG--TALTDTYAKSG 500
L PN + F SVL A A + ++KG LH +I++ + D + + + D +S
Sbjct: 636 LLNVKPNHTIFISVLRACAHMGYVDKG--LHYFQIMQSHYGLDPHMEHYSCMVDLLGRSD 693
Query: 501 DIESSRRVFDRMP-DKNEISWTVMVRGLAESG 531
+ + ++ + M + +++ W ++ G
Sbjct: 694 QVNEALKLIESMHFEADDVIWRTLLSNCKMQG 725
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 185/427 (43%), Gaps = 75/427 (17%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
++G LHG +K G+ + +L MY +EA I D+ D V N +I A+
Sbjct: 357 LEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAH 416
Query: 98 IQ-------------------------WGNLEEA----QRLFDGMPERNEV-------SW 121
Q +G++ +A Q L GM + W
Sbjct: 417 EQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDW 476
Query: 122 ---TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
+AL+ + K G + E+ +R + +SW + I GF S A + F ++LE
Sbjct: 477 FVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEM 536
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV P+ T++++ CA + LG + I K V + ++L+
Sbjct: 537 GVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLV------------ 584
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
D++ + G++ ++R +F++ P+R+ V+WS MI Y G+ E
Sbjct: 585 -------------------DMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGE 625
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNA 356
+A +LF +M + KPN + F VL A A + + G+H + +++ G++ + +
Sbjct: 626 QAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLH-YFQIMQSHYGLDPHMEHYSC 684
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
++DL + + + + +S+ + A V W +++ + G +E A++ F+++ + +
Sbjct: 685 MVDLLGRSDQVNEALKLIESMHFE--ADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDP 742
Query: 417 VSWSAII 423
SA +
Sbjct: 743 QDSSAYV 749
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 45/266 (16%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K TFS +L +++ +L GK H ++I F +++ L Y KS ++ + +VFD
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 511 RMPDKNEISWTVMVRGLAE-------------------------------SGYAKESINL 539
RMP ++ ISW M+ G AE +G ++SI +
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY-FNSMEPIYNIKPNGRHYTCVVDML 598
F M I + T VL AC SG+ D GL + + + + + +VDM
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE--RAVKNLWKLAEEHPAG 656
S+ +L A MP E + W+++++G +N++ E + K++ K+ G
Sbjct: 184 SKCKKLDGAFRIFREMP-ERNLVCWSAVIAG--YVQNDRFIEGLKLFKDMLKV------G 234
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTE 682
+ + YAS R ++ KL T+
Sbjct: 235 MGVSQSTYASVFRSCAGLSAFKLGTQ 260
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 296/525 (56%), Gaps = 38/525 (7%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N L+ L K G++ A+++FD+M KRD SW +L + + G + + FD MP R+ V
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
S++ IA ++ + P+E+ LF++M R F+P +L+A A L LR G +H +
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSI 181
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+ +VFI NAL D+Y+KCGE + R +FD + +K++ VSWN MI GY NGQ E
Sbjct: 182 IVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNL---VSWNLMISGYAKNGQPE 238
Query: 403 -----------------------------------EAKELFDNMPKRNDVSWSAIISGYL 427
EA+ +F +++ V W+A++ GY
Sbjct: 239 KCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYA 298
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
++ + + +FNEMLL P+ T SSV+ + A +ASL G+ +HGK I G ++
Sbjct: 299 KNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLL 358
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ +AL D Y+K G I+ +R VF+ MP +N +SW M+ G A++G+ K+++ LFE M +
Sbjct: 359 VSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQK 418
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
P+ +T + +L AC H +++G +YF+S+ + + P HY C+V++L R+GR+ +A
Sbjct: 419 FKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQA 478
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
I +M +PD W++LLS C T + AE A ++L++L Y++LSN+YAS
Sbjct: 479 VALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASM 538
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
GRW D +VR LM K ++K G SW+E+ N+VH F + +P+
Sbjct: 539 GRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPE 583
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 202/382 (52%), Gaps = 42/382 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D +HN +++ ++G L +AQ LFD M +R+ SW AL+S + K G ++ F+R P
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
F++ +S+ I GF N E+L+LF ++ G +P E T SI A A++ D R G
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW------------ 253
+ G I F +V + N+L + K GE++ AR +FD + K+++VSW
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236
Query: 254 -----------------------TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ I+ + + G + EARR+F E E++ V W+ M+
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVG 296
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y ++G E+A LF +M +P++ S V+S+ A L +L G VH + G+ +
Sbjct: 297 YAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNN 356
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+ +S+ALID+YSKCG D R VF+ + ++ VVSWN+MI G NG ++A ELF+N
Sbjct: 357 LLVSSALIDMYSKCGFIDDARSVFNLMPTRN---VVSWNAMIVGCAQNGHDKDALELFEN 413
Query: 411 MP----KRNDVSWSAIISGYLE 428
M K ++V++ I+S L
Sbjct: 414 MLQQKFKPDNVTFIGILSACLH 435
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
+ N+++ + + ++EH F + + LL A L ++
Sbjct: 34 RTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLH--------------LYAKFGKLRDAQN 79
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
L K++K D F AL YAKSG I++ + FDRMP ++ +S+ + G + +
Sbjct: 80 LFDKMLK----RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSC 135
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP---IYNIKPNGR 589
+ES+ LF+ M++ P E TI+S+L A + L+D L+Y + + N N
Sbjct: 136 PQESLELFKRMQREGFEPTEYTIVSILNASAQ--LLD--LRYGKQIHGSIIVRNFLGNVF 191
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
+ + DM ++ G + +A + + + + +W ++SG Y E+ + L ++
Sbjct: 192 IWNALTDMYAKCGEIEQARWLFDCLT-KKNLVSWNLMISG---YAKNGQPEKCIGLLHQM 247
Query: 650 A-EEHPAGYVLLSNI---YASAGRWIDAMNVRKLMTEKGL 685
H V +S I Y GR +A V EK +
Sbjct: 248 RLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDI 287
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/571 (34%), Positives = 304/571 (53%), Gaps = 52/571 (9%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFR 201
RNP N SW AI GF+ + EA+ L+ ++L+ G KP+ T+ + KACA ++ R
Sbjct: 39 RNP--NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 96
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + G + GF+ + V N++I L +
Sbjct: 97 MGSEILGHVLHLGFDSDIFVSNAVIHL-------------------------------LV 125
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
GDL AR++FD+ R+ VSW+ MI Y + G+ EA +R+M KP+
Sbjct: 126 SCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIG 185
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
V+S+ A L+ L G H ++ + G++ V ++NAL+D+Y KCG + R +FDS+ K
Sbjct: 186 VVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT 245
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+ VSW +M LFD MP ++ V W+A+I GY+ + A+FNE
Sbjct: 246 M---VSWTTM---------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNE 287
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M P++ T S L A + + +L+ G +H I K +V LGTAL D YAK G
Sbjct: 288 MQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGK 347
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
I + +VF +P +N ++WT ++ GLA G A +I F EM S+ P+E+T L +L A
Sbjct: 348 ITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSA 407
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C H GLV++G KYF+ M +N+ P +HY+C+VD+L R+G L EAE+ I SMP E D+
Sbjct: 408 CCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAV 467
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +L C+ + N + ERA L ++ YVLL+N+Y A W +A RKLM
Sbjct: 468 VWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMR 527
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++G+ K+ GCS +EV V+ F + +P+
Sbjct: 528 QRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQ 558
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 184/395 (46%), Gaps = 53/395 (13%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFS 320
E DL I N SW+V I + S P EA L++++ + KP+ +
Sbjct: 24 EWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYP 83
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ A A L +R G + HVL +G + D+F+SNA+I L CG+ R +FD +
Sbjct: 84 LLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR 143
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D +VSWNSMI GY G EA +
Sbjct: 144 D---LVSWNSMINGYVRRGWAYEA-------------------------------LNFYR 169
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM + G P++ T V+ + A + L+ G++ H I + G V L AL D Y K G
Sbjct: 170 EMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCG 229
Query: 501 DIESSRR----------------VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
++ES+R+ +FD MPDK+ + W M+ G + KE++ LF EM+
Sbjct: 230 NLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQ 289
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+I P+E+T++S L ACS G +D G+ + +E + + N T ++DM ++ G++
Sbjct: 290 AMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAKCGKI 348
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
++A +P +S W +++SG + N A
Sbjct: 349 TKAIQVFQELPGR-NSLTWTAIISGLALHGNAHGA 382
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 193/403 (47%), Gaps = 51/403 (12%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A+I + G ++ + F+++ ++++SW + I G+V+ G+++EAL + ++ G+KP
Sbjct: 119 AVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKP 178
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+EVT + +CA++ D LG I + G + V + N+L+ + +K G ++ AR +F
Sbjct: 179 DEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLF 238
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D M + +VSWT +L FDEMP+++ V W+ MI Y + +EA
Sbjct: 239 DSMTNKTMVSWTTML---------------FDEMPDKDVVPWNAMIGGYVHANRGKEALA 283
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF +M + P+ LSA + L AL G+ +H ++ K + +V + ALID+Y+
Sbjct: 284 LFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYA 343
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ VF + ++ ++W ++I G L+G A
Sbjct: 344 KCGKITKAIQVFQELPGRN---SLTWTAIISGLALHGNAHGA------------------ 382
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLG 481
A F+EM+ + +P++ TF +L A +E+G+ ++ K
Sbjct: 383 -------------IAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFN 429
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVM 523
+ + + D ++G +E + + MP + + + W +
Sbjct: 430 LSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGAL 472
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 31/167 (18%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI + K G++ +++ F+ P +N ++WTA I G +G + A+ F +++++ V
Sbjct: 336 TALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVM 395
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+EVTF + AC G + + G K+ S +S LS K+
Sbjct: 396 PDEVTFLGLLSACCH-----------GGLVEEG-RKYFSQMSSKFNLSPKLKH------- 436
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVM 287
++ ++D+ G L EA + MP E + V W +
Sbjct: 437 -----------YSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGAL 472
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 319/585 (54%), Gaps = 43/585 (7%)
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
R E ++ + ++P ++ + + + + G + L LF +L E G+ P+ T+ + K
Sbjct: 148 RYAEKIFNYVQDP--SLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLK 205
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
A + D R G V G I K G + V NSLI
Sbjct: 206 AIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLI-------------------------- 239
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-S 311
D++ E+ ++ A+++FDEM R+ VSW+VMI+ Y + E+A FR+M + +
Sbjct: 240 -----DMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGN 294
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDG 370
KP+ + LSA +LK L G +H +V K +G I NAL+D+Y+KCG
Sbjct: 295 EKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR--IDNALLDMYAKCGCLNIA 352
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
R +FD E + +V+ W SMI GY G + EA++LFD P R+ V W+A+I+GY++
Sbjct: 353 RNIFD---EMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 409
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
FD A+F EM + P+K T ++L A + +LE+GK +HG + + DV +GT
Sbjct: 410 HFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 469
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL + Y+K G ++ S +F + DK+ SWT ++ GLA +G E++ LF EME+ P
Sbjct: 470 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKP 529
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+++T + VL ACSH GLV++G ++FNSM+ ++ I+P HY CV+D+L R+G L EAE+
Sbjct: 530 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEEL 589
Query: 611 INSMPFEPDS---NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
I +P E + +LLS C+ + N + ER K L + + + LL+NIYAS
Sbjct: 590 IQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASV 649
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
RW DA VR+ M E G++K GCS +EV VH F +P+
Sbjct: 650 DRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPE 694
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 191/404 (47%), Gaps = 71/404 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK I V QG + G ++KTG+ + Y
Sbjct: 203 VLKAIGCLRDVRQGEKVRGFIVKTGMDLDNY----------------------------- 233
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V+N +I+ + N+E A++LFD M R+ VSW +ISG+++ R E+++ N F
Sbjct: 234 --VYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAI-----NTF 286
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ + E KP+E T S AC + + LG +
Sbjct: 287 REMQQ-------------------------EGNEKPDEATVVSTLSACTALKNLELGDEI 321
Query: 207 FGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ K GF + N+L+ + K G +++AR++FD M ++V+ WT ++ +I GD
Sbjct: 322 HNYVRKELGFTTRID--NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGD 379
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L EAR +FD+ P R+ V W+ MI Y Q + ++A LFR+M KP+ +L+
Sbjct: 380 LREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTG 439
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L AL G +H ++ + I DV + ALI++YSKCG +F + +KD A
Sbjct: 440 CAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTA-- 497
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISG 425
SW S+I G +NG+ EA LF M K +D+++ ++S
Sbjct: 498 -SWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSA 540
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 188/415 (45%), Gaps = 71/415 (17%)
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
RD ++ + +G+L A +IF+ + + + ++VM+ Y + G + LF+Q+
Sbjct: 129 RDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQL 188
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
P+ + VL A+ L+ +R G V ++K G++ D ++ N+LID+Y +
Sbjct: 189 REDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNV 248
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
++ + +FD + +D VSWN MI SGY+
Sbjct: 249 ENAKKLFDEMTTRD---SVSWNVMI-------------------------------SGYV 274
Query: 428 EHKQFDLVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYD 485
++F+ F EM G E P+++T S L A ++ +LE G ++H + K LGF
Sbjct: 275 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR 334
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE---------- 535
+ AL D YAK G + +R +FD M KN I WT M+ G G +E
Sbjct: 335 I--DNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPV 392
Query: 536 ---------------------SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ LF EM+ I P++ T++++L C+ G +++G K+
Sbjct: 393 RDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQG-KW 451
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ I + T +++M S+ G + ++ + + + D+ +W S++ G
Sbjct: 452 IHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELE-DKDTASWTSIICG 505
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 141/291 (48%), Gaps = 33/291 (11%)
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
N + K+L GF + N +++ + G L A+ +FD M +N + WT++ISG++ G +
Sbjct: 323 NYVRKEL-GFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLR 381
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
E+ F+++P ++V+ WTA I G+VQ +A+ LF ++ +KP++ T ++ CA
Sbjct: 382 EARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCA 441
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
++ G + G + + + IT+ DVV T
Sbjct: 442 QLGALEQGKWIHGYLDE-----------NRITM--------------------DVVVGTA 470
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+++++ + G + ++ IF E+ +++ SW+ +I +G EA RLF +M R KP+
Sbjct: 471 LIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPD 530
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCG 365
F VLSA + + G + K+ IE V +IDL + G
Sbjct: 531 DITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAG 581
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 326/605 (53%), Gaps = 52/605 (8%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
GN+E A+ F+ MP R S+ AL++G+ ++ + ++ F R P +++ S+ A I G
Sbjct: 31 GNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLS 90
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL-IFKAGFEK-H 218
+ L + P+ V+F+S+ + R GL + +F+ E+ H
Sbjct: 91 LRRQTLPDAAAALASIP--FPPSVVSFTSLLRGYV-----RHGLLADAIRLFQQMPERNH 143
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
VS L L L G V+ AR +FD M RDVV+WT +L + + G + EAR +FDEMP+
Sbjct: 144 VSYTVLLGGL-LDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPK 202
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
RN VSW+ MI+ Y Q+G A +LF M
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMP------------------------------ 232
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
E++ A++ Y + G +D +F+++ E VA + N+M+ G+G
Sbjct: 233 ---------ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVA---ACNAMMVGFGQR 280
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G ++ AK +F+ M +R+D +WSA+I Y +++ + F EML G PN + S+L
Sbjct: 281 GMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISIL 340
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A++A L+ G+++H +++ F DVF +AL Y K G+++ ++RVF K+ +
Sbjct: 341 TVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIV 400
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W M+ G A+ G ++++ +F +M ++P+ +T + L ACS++G V +G + FNSM
Sbjct: 401 MWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSM 460
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+I+P HY+C+VD+L RSG + EA D I +MP EPD+ W +L+ C+ ++N +I
Sbjct: 461 TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEI 520
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
AE A K L +L + YVLLS+IY S GRW DA +RK ++ + L KS GCSW+E
Sbjct: 521 AEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDK 580
Query: 699 QVHFF 703
+VH F
Sbjct: 581 RVHLF 585
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 186/422 (44%), Gaps = 77/422 (18%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T LL L + + EA + ++ D+V M++ Q G + EA+ LFD MP+RN V
Sbjct: 147 TVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV 206
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SWTA+ISG+ ++G V + FE P +N +SWTA + G++Q G +A +LF + E
Sbjct: 207 SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHP 266
Query: 180 VKP---------------------------NEVTFSSICKACAEINDFRL-GLSVFGLIF 211
V ++ T+S++ KA E N+F + LS F +
Sbjct: 267 VAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKA-YEQNEFLMEALSTFREML 325
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLG 267
G + S++T+ + +D R V M + DV + + ++ ++I+ G+L
Sbjct: 326 WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLD 385
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A+R+F ++ V W+ MI Y Q G E+A +F M P+ + L+A
Sbjct: 386 KAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTAC- 444
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDV 382
S G+ K+GR +F+S+ +
Sbjct: 445 ----------------------------------SYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNE 441
H ++ M+ G +G +EEA +L NMP D V W A++ H+ ++ +
Sbjct: 471 EH---YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKK 527
Query: 442 ML 443
+L
Sbjct: 528 LL 529
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 218/741 (29%), Positives = 360/741 (48%), Gaps = 123/741 (16%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F+S + C K I S + G LHG ++K G + Y+ L+ +Y + A
Sbjct: 250 AFSSVLSAC----KKIESLEI---GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 302
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF-----DGM-PERNEVS--------- 120
I +++ D V +N +IN Q G E+A LF DG+ P+ N ++
Sbjct: 303 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 362
Query: 121 -----------WT-------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+T AL++ + K +E ++ YF +NV+ W +
Sbjct: 363 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 422
Query: 157 CGF-----VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ ++N F ++F ++ + PN+ T+ SI K C + D LG + I
Sbjct: 423 VAYGLLDDLRNSF-----RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 477
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K F+ + VC+ LI + K+G++D +W +++
Sbjct: 478 KTNFQLNAYVCSVLIDMYAKLGKLD--------------TAWDILI-------------- 509
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
++ VSW+ MIA Y Q + ++A FRQM + + + +SA A L+A
Sbjct: 510 ---RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 566
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L+ G +HA G D+ NAL+ LYS+CG
Sbjct: 567 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG-------------------------- 600
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
++EE+ F+ ++++W+A++SG+ + + VF M G N
Sbjct: 601 --------KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 652
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF S + A++ A++++GK +H I K G+ + + AL YAK G I + + F
Sbjct: 653 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 712
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+ KNE+SW ++ ++ G+ E+++ F++M +++ PN +T++ VL ACSH GLVDKG
Sbjct: 713 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 772
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
+ YF SM Y + P HY CVVDML+R+G LS A++FI MP +PD+ W +LLS C
Sbjct: 773 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 832
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV-RKLMTEKGLRKSGG 690
+KN +I E A +L +L E A YVLLSN+YA + +W DA ++ R+ M EKG++K G
Sbjct: 833 VHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW-DARDLTRQKMKEKGVKKEPG 891
Query: 691 CSWVEVRNQVHFFFQKTDHNP 711
SW+EV+N +H F+ ++P
Sbjct: 892 QSWIEVKNSIHSFYVGDQNHP 912
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 158/648 (24%), Positives = 284/648 (43%), Gaps = 117/648 (18%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYL------GSRKSLEA---------NEIVKDLN 83
+GR LH ++K G+ L+ +L YL G+ K + N+++K+L
Sbjct: 63 EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 122
Query: 84 GFDL-----------VVHNCMINANIQWGNLE---------------EAQRLFDGMPERN 117
+L V N N G LE A+ L+ G+ + +
Sbjct: 123 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD-S 181
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
V LI + ++G V+ + F+ ++ SW A I G +N EA++LF +
Sbjct: 182 TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV 241
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
G+ P FSS+ AC +I +G + GL+ K GF VCN+L++L +G +
Sbjct: 242 LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 301
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A +F M +RD V+++ +I +Q GY
Sbjct: 302 AEHIFSNMSQRDA-------------------------------VTYNTLINGLSQCGYG 330
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
E+A LF++M +P+++ + ++ A ++ L G +HA+ K+G + I AL
Sbjct: 331 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 390
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
++LY+KC D D +E +V +VV WN M+ YG L D++ RN
Sbjct: 391 LNLYAKCA---DIETALDYFLETEVENVVLWNVMLVAYG----------LLDDL--RNS- 434
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
F +F +M + +PN+ T+ S+L + LE G+ +H +I
Sbjct: 435 ------------------FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 476
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F + ++ + L D YAK G ++++ + R K+ +SWT M+ G + + +++
Sbjct: 477 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 536
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
F +M I +E+ + + + AC+ + +G + ++ + + +V +
Sbjct: 537 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTL 595
Query: 598 LSRSGRLSEAEDFINSMPFEP----DSNAWASLLSGCKTYKNEQIAER 641
SR G++ E+ + FE D+ AW +L+SG + N + A R
Sbjct: 596 YSRCGKIEES-----YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 638
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 151/354 (42%), Gaps = 71/354 (20%)
Query: 313 KPNTSCFSIVLSA-LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+PN +L L + +L G +H+ +LK+G++ + +S L D Y G+
Sbjct: 41 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 100
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD + E+ + +WN MI KEL RN +
Sbjct: 101 KVFDEMPERT---IFTWNKMI------------KEL----ASRNLIGE------------ 129
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
VF +F M+ PN+ TFS VL C SVA + + +H +I+ G +
Sbjct: 130 ---VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA-FDVVEQIHARILYQGLRDSTVVC 185
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
L D Y+++G ++ +RRVFD + K+ SW M+ GL+++ E+I LF +M I
Sbjct: 186 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 245
Query: 550 PNELTILSVLFACSH----------SGLVDK-GLK------------YFN-----SMEPI 581
P SVL AC GLV K G YF+ S E I
Sbjct: 246 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 305
Query: 582 YN--IKPNGRHYTCVVDMLSRSGRLSEAEDFINSM---PFEPDSNAWASLLSGC 630
++ + + Y +++ LS+ G +A + M EPDSN ASL+ C
Sbjct: 306 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 449 PNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN T +L C + SL++G+ LH +I+KLG + L L D Y GD+ +
Sbjct: 42 PNHQTLKWLLEGCLKTN-GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 100
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VFD MP++ +W M++ LA E LF M ++TPNE T VL AC
Sbjct: 101 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 160
Query: 567 LVDKGLKYFNSMEPIY-NIKPNGRHYTCVV-----DMLSRSGRLSEAEDFINSMPFEPDS 620
+ F+ +E I+ I G + VV D+ SR+G + A + + + D
Sbjct: 161 VA------FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DH 213
Query: 621 NAWASLLSGCKTYKNEQIAE 640
++W +++SG KNE AE
Sbjct: 214 SSWVAMISGLS--KNECEAE 231
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 329/615 (53%), Gaps = 52/615 (8%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N I + GN+E A+ F+ MP R S+ AL++G+ ++ + ++ F R P +++
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL- 209
S+ A I G + L + P+ V+F+S+ + R GL +
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIP--FPPSVVSFTSLLRGYV-----RHGLLADAIR 133
Query: 210 IFKAGFEK-HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+F+ E+ HVS L L L G V+ AR +FD M RDVV+WT +L + + G + E
Sbjct: 134 LFQQMPERNHVSYTVLLGGL-LDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITE 192
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +FDEMP+RN VSW+ MI+ Y Q+G A +LF M
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP-------------------- 232
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
E++ A++ Y + G +D +F+++ E VA +
Sbjct: 233 -------------------ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVA---AC 270
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+M+ G+G G ++ AK +F+ M +R+D +WSA+I Y +++ + F EML G
Sbjct: 271 NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVR 330
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN + S+L A++A L+ G+++H +++ F DVF +AL Y K G+++ ++RV
Sbjct: 331 PNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRV 390
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F K+ + W M+ G A+ G ++++ +F +M ++P+ +T + L ACS++G V
Sbjct: 391 FHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKV 450
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+G + FNSM +I+P HY+C+VD+L RSG + EA D I +MP EPD+ W +L+
Sbjct: 451 KEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMG 510
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ ++N +IAE A K L +L + YVLLS+IY S GRW DA +RK ++ + L KS
Sbjct: 511 ACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKS 570
Query: 689 GGCSWVEVRNQVHFF 703
GCSW+E +VH F
Sbjct: 571 PGCSWIEYDKRVHLF 585
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 183/414 (44%), Gaps = 77/414 (18%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T LL L + + EA + ++ D+V M++ Q G + EA+ LFD MP+RN V
Sbjct: 147 TVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV 206
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SWTA+ISG+ ++G V + FE P +N +SWTA + G++Q G +A +LF + E
Sbjct: 207 SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHP 266
Query: 180 VKP---------------------------NEVTFSSICKACAEINDFRL-GLSVFGLIF 211
V ++ T+S++ KA E N+F + LS F +
Sbjct: 267 VAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKA-YEQNEFLMEALSTFREML 325
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLG 267
G + S++T+ + +D R V M + DV + + ++ ++I+ G+L
Sbjct: 326 WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLD 385
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A+R+F ++ V W+ MI Y Q G E+A +F M P+ + L+A
Sbjct: 386 KAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTAC- 444
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDV 382
S G+ K+GR +F+S+ +
Sbjct: 445 ----------------------------------SYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLV 435
H ++ M+ G +G +EEA +L NMP D V W A++ H+ ++
Sbjct: 471 EH---YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/566 (34%), Positives = 308/566 (54%), Gaps = 35/566 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLSV 206
N SW AI G+V++ A+ L+ +L G P+ T+ + K CA + +
Sbjct: 118 NXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + + GF+ + V N++I V + G+L
Sbjct: 178 LGHVIQLGFDSDLFVHNAII-------------------------------HVLVSCGEL 206
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR++FDE R+ VSW+ +I Y + G +EAF L+ +M + P+ V+SA
Sbjct: 207 LAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSAS 266
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L+ L G +H + ++G+ V ++NAL+D+Y KC + +++F+++ +K V V
Sbjct: 267 AQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTV---V 323
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SW +M+ GY G +E A LF+ MP+++ V W+A+I G+++ K+ A+F+EM S
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASS 383
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P+K T + L A + + +L+ G +H + K +V LGTAL D YAK G+I+ +
Sbjct: 384 VAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAI 443
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VF+ MP +N ++WT ++ GLA G +I+ F EM + P+E+T + VL AC H G
Sbjct: 444 QVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGG 503
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LVD+G YF M Y I P +HY+C+VD+L R+G L EAE+ I SMPFEPD+ W +L
Sbjct: 504 LVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGAL 563
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
G + + N + ERA L +L YVLL+N+Y A W A VRK+M E+G+
Sbjct: 564 FFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVE 623
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNPK 712
K+ GCS +E+ V+ F + +P+
Sbjct: 624 KTPGCSSIEMNGLVYDFIIRDKSHPQ 649
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 222/478 (46%), Gaps = 71/478 (14%)
Query: 55 ERYLTTRLLIMYLGSRKSLEANEIVKDLN--GFD--LVVHNCMINANIQWGNLEEAQRLF 110
+ Y L + G S ANEI+ + GFD L VHN +I+ + G L A++LF
Sbjct: 154 DNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLF 213
Query: 111 DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALK 170
D + ++++SW + I G+V+ G + EA
Sbjct: 214 D-------------------------------ESCVRDLVSWNSIINGYVRCGLADEAFD 242
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL 230
L+ K+ E V P+EVT + A A++ + LG + I + G V + N+L+ + +
Sbjct: 243 LYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYI 302
Query: 231 KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
K ++ A+ +F+ M K+ VVSWT ++ + + G L A R+F+EMPE++ V W+ +I
Sbjct: 303 KCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGG 362
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
+ Q+ +EA LF +M S P+ LSA + L AL G+ +H +V K + +
Sbjct: 363 FVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMN 422
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
V + AL+D+Y+KCG K VF+ + ++ ++W ++I G L+GQ A
Sbjct: 423 VALGTALVDMYAKCGNIKKAIQVFEEMPGRN---SLTWTAIICGLALHGQPHAA------ 473
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
+ F+EM+ G +P++ TF VL A +++G
Sbjct: 474 -------------------------ISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQG 508
Query: 471 KDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRG 526
+D ++ K G + + L D ++G +E + + MP + + + W + G
Sbjct: 509 RDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG 566
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 68/410 (16%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFS 320
E +L +I + N SW++ I Y +S P A L+R M R S P+ +
Sbjct: 100 EWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYP 159
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ A + + HV+++G + D+F+ NA+I + CGE R +FD E
Sbjct: 160 LLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFD---ES 216
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
V +VSWNS+I GY G +EA +L+ M + N
Sbjct: 217 CVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELN------------------------- 251
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT----- 495
+P++ T V+ ASA + +L G+ LH I ++G V L AL D
Sbjct: 252 ------VMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCK 305
Query: 496 --------------------------YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
YAK G +ES+ R+F+ MP+K+ + W ++ G +
Sbjct: 306 NIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQ 365
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
+ +KE++ LF EM+ +S+ P+++T+++ L ACS G +D G+ + ++ +N+ N
Sbjct: 366 AKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVA 424
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
T +VDM ++ G + +A MP +S W +++ G + A
Sbjct: 425 LGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQPHAA 473
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 157/340 (46%), Gaps = 14/340 (4%)
Query: 84 GFDLVV--HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
G +L V N +++ I+ N+E A+ LF+ M ++ VSWT ++ G+ K G +E ++ F
Sbjct: 286 GLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLF 345
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
P ++V+ W A I GFVQ S EAL LF ++ S V P+++T + AC+++
Sbjct: 346 NEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALD 405
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G+ + + K +V++ +L+ + K G + A VF+ M R+ ++WT I+
Sbjct: 406 VGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLA 465
Query: 262 EMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNT 316
G A F EM +E+++ +++ G ++ F QMT +Y P
Sbjct: 466 LHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKL 525
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+S ++ L R+G A L + E D + AL G G
Sbjct: 526 KHYSCLVDLLG-----RAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAA 580
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
++E D + + YG E+A+++ M +R
Sbjct: 581 SKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEER 620
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 326/673 (48%), Gaps = 127/673 (18%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG+ +KTG+ ++ + LL MY +
Sbjct: 135 GELLHGYAVKTGLVNSVFVGSALLDMYTKN------------------------------ 164
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + E +R+F MP RN VSWTA+I+G
Sbjct: 165 -GKIFEGRRVFHEMPMRNVVSWTAIITG-------------------------------L 192
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
V+ G++ EAL F ++ S V+ + TF+ KACA+ G + K GF+
Sbjct: 193 VRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSS 252
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N+L T+ K G+++ ++F++M RDVVSWT I+ ++MG
Sbjct: 253 FVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQ-------------- 298
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
E A + F +M PN F+ V+S A+L + G +H
Sbjct: 299 -----------------EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLH 341
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
A +L +G+ + + N+++ +Y+KCG+ ++F + +D +VSW+++I GY G
Sbjct: 342 ALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRD---IVSWSTIIAGYXQGG 398
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+ EA EL +SW M + G P + +SVL
Sbjct: 399 HVSEAFEL---------LSW----------------------MRMEGPKPTEFALASVLS 427
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A ++A LE GK LH ++ +G + + +AL + Y K G IE + R+FD + + +S
Sbjct: 428 ACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVS 487
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
WT M+ G AE GY++E I+LFE++ + + P+ +T + VL ACSH+GLVD G YFN+M
Sbjct: 488 WTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMS 547
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y I P+ HY C++D+L R+GRLS+AE I +MPF D W++LL C+ + + +
Sbjct: 548 KKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERG 607
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
R + + +L ++ L+NIYAS G+W +A ++RKLM KG+ K G SW++V++
Sbjct: 608 RRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDL 667
Query: 700 VHFFFQKTDHNPK 712
V F +P+
Sbjct: 668 VFAFVAGDRSHPQ 680
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/581 (30%), Positives = 313/581 (53%), Gaps = 67/581 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
L+S + K R+ E+ F + ++ ++W ICG+ Q G ++KLF+ +++ G P
Sbjct: 262 GLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVP 320
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ ++ +S +AC + D ++G V + +GFE CN
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACN------------------- 361
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+++D++ + GDL A+ +FD ++ V+W+ +I Y QSGY +E
Sbjct: 362 ------------ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE 409
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F+ M + KP++ F ++LS + L + G +H V+K G E ++ I N+L+D+Y+
Sbjct: 410 SFKMM-KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYA 468
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC G+M++ ++F M + +SW+ +
Sbjct: 469 KC----------------------------------GEMDDLLKVFSYMSAHDIISWNTV 494
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I+ + + F + NEM G +P+++T +L + +A +GK++HG I K GF
Sbjct: 495 IASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGF 554
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+V +G AL + Y+K G +E+ +VF M +K+ ++WT ++ G K+++ F++
Sbjct: 555 ESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
ME + + P+ + ++ +FACSHSG+V +GL++F+ M+ YN++P HY CVVD+L+RSG
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L++AE+FI SMP +PD++ W +LLS C+ N IA+R K + +L + YVL+SN
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSN 734
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
IYA+ G+W VR M KGL+K G SW+E++ +V+ F
Sbjct: 735 IYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVF 775
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/614 (24%), Positives = 260/614 (42%), Gaps = 87/614 (14%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
L LG + ++ D F V+++C +++ G + + G E +
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGF-ESDLYIG 159
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
ALI + + ++ + + FE ++ +SW + I G+ NGF +AL ++ K +G+
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T SS+ AC + + G++V G+I K G V + N L+++ K + AR V
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F +M +D V+W + MI Y Q G E +
Sbjct: 280 FSKMAVKDSVTW-------------------------------NTMICGYAQLGRHEASV 308
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+LF M F P+ + + A L+ G VH +++ G E D N LID+Y
Sbjct: 309 KLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMY 367
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG+ + VFD+ KD V+WNS+I GY +G +E E F M
Sbjct: 368 AKCGDLLAAQEVFDTTKCKD---SVTWNSLINGYTQSGYYKEGLESFKMMK--------- 415
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+E K P+ TF +L + +A + +G+ +H +IK G
Sbjct: 416 -----MERK------------------PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFG 452
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F ++ +G +L D YAK G+++ +VF M + ISW ++ +
Sbjct: 453 FEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMIN 512
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKY--------FNSMEPIYNIKPNGRHYTC 593
EM + P+E T+L +L CS + +G + F S PI N
Sbjct: 513 EMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGN---------A 563
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+++M S+ G L M E D W +L+S Y + A +A +++ +L+
Sbjct: 564 LIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGEGKKALKAFQDM-ELSGVL 621
Query: 654 PAGYVLLSNIYASA 667
P ++ I+A +
Sbjct: 622 PDSVAFIAFIFACS 635
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 193/428 (45%), Gaps = 67/428 (15%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+P NV W + I NG +AL + ++ E ++P+ TF S+ +CA I D LG
Sbjct: 81 SPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG 140
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V + GFE + + N+LI + + ++D AR VF+ M RD
Sbjct: 141 CIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD-------------- 186
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
VSW+ +I+ Y +G+ E+A ++ + P+ S VL
Sbjct: 187 -----------------SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVL 229
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A SL A++ G+ VH + KIGI DV I N L+ +Y K ++ R VF + KD
Sbjct: 230 LACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD-- 287
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V+WN+MI GY G+ E + +LF +M
Sbjct: 288 -SVTWNTMICGYAQLGRHEASVKLFMDM-------------------------------- 314
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+ G +P+ + +S + A L+ GK +H +I GF D L D YAK GD+
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLL 374
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+++ VFD K+ ++W ++ G +SGY KE + F +M K P+ +T + +L S
Sbjct: 375 AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFS 433
Query: 564 HSGLVDKG 571
+++G
Sbjct: 434 QLADINQG 441
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 173/353 (49%), Gaps = 37/353 (10%)
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
P N W+ +I +G +A + +M +P+ F V+++ A + L G
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC 141
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VH H +++G E D++I NALID+YS R V
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYS--------RFV----------------------- 170
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
++ A+ +F+ M R+ VSW+++ISGY + ++ ++++ ++G +P+ T SS
Sbjct: 171 ---DLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSS 227
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL A S+ ++++G +HG I K+G DV +G L Y K + +RRVF +M K+
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
++W M+ G A+ G + S+ LF +M P+ L+I S + AC SG + G K+ +
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVG-KFVH 345
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + ++DM ++ G L A++ ++ + DS W SL++G
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK-DSVTWNSLING 397
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 176/413 (42%), Gaps = 73/413 (17%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V +G A+HG + K GI + + LL MY + EA + + D V N MI
Sbjct: 238 VKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG 297
Query: 97 NIQWGNLEEAQRLF----DG-MP---------------------------------ERNE 118
Q G E + +LF DG +P E +
Sbjct: 298 YAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDT 357
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V+ LI + K G + + F+ ++ ++W + I G+ Q+G+ E L+ F K+++
Sbjct: 358 VACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKM 416
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
KP+ VTF + +++ D G + + K GFE + + NSL+ + K GE+D
Sbjct: 417 ERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDL 476
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VF M D++SW ++ + D
Sbjct: 477 LKVFSYMSAHDIISWNTVIASSVHFDDC-------------------------------T 505
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
F++ +M P+ + +L + L R G +H ++ K G E +V I NALI
Sbjct: 506 VGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALI 565
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
++YSKCG ++ VF + EKD VV+W ++I +G+ G+ ++A + F +M
Sbjct: 566 EMYSKCGSLENCIKVFKYMKEKD---VVTWTALISAFGMYGEGKKALKAFQDM 615
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 171/408 (41%), Gaps = 87/408 (21%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF---- 141
D V N +I+ + G+L AQ +FD ++ V+W +LI+G+ + G +E + F
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMK 415
Query: 142 -ERNP-------FQNVISWTAAI-------CGFVQNGFSFE------------------- 167
ER P ++ S A I C ++ GF E
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475
Query: 168 ALKLFL-----------KLLESGVKPNEVTFS--------------------SICKACAE 196
LK+F ++ S V ++ T I C+
Sbjct: 476 LLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL 535
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ R G + G IFK+GFE +V + N+LI + K G ++ VF M+++DVV+WT +
Sbjct: 536 LAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTAL 595
Query: 257 LDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYS 311
+ F G+ +A + F +M + V++ I + SG +E R F +M T Y+
Sbjct: 596 ISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYN 655
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCGETKD 369
+P ++ V+ LA RSG+ A +L + ++ D + AL+ G T
Sbjct: 656 LEPRMEHYACVVDLLA-----RSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNI 710
Query: 370 GRLVFDSIVE---KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+ V I+E D + V +++ Y G+ ++ K + ++M +
Sbjct: 711 AQRVSKKILELNSDDTGYYVLVSNI---YATLGKWDQVKTVRNSMKTK 755
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 104/251 (41%), Gaps = 46/251 (18%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ +HG++ K+G E+N + + N +I
Sbjct: 541 QGKEIHGYIFKSG---------------------FESN----------VPIGNALIEMYS 569
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ G+LE ++F M E++ V+WTALIS F +G ++++ F+ V+ + A
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 159 FV----QNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFG--LIF 211
F+ +G E L+ F ++ + ++P ++ + A R GL I
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLA-----RSGLLAQAEEFIL 684
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR---MEKRDVVSWTVILDVFIEMGDLGE 268
+ S+ +L++ G ++A+ V + + D + ++ +++ +G +
Sbjct: 685 SMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQ 744
Query: 269 ARRIFDEMPER 279
+ + + M +
Sbjct: 745 VKTVRNSMKTK 755
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/575 (34%), Positives = 320/575 (55%), Gaps = 36/575 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +V W I G+ + S + L+ +L +KP+ TF + K
Sbjct: 92 FDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLK-------- 143
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
GF K ++LK G+V L +V ++ + +F
Sbjct: 144 -------------GFTK---------DMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLF 181
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS--FKPNTSC 318
G + AR+IFD V+W+V+++ YN+ EE+ RLF +M + PN+
Sbjct: 182 SLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVT 241
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSI 377
++LSA + LK L G ++ +K GI E ++ + NALID+++ CGE R VFD +
Sbjct: 242 LVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEM 301
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+DV +SW S++ G+ +++ A++ FD MP+R+ VSW+A+I GYL +F V
Sbjct: 302 KTRDV---ISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLT 358
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+F +M +S P++ T S+L A A + +LE G+ I K D F+G AL D Y
Sbjct: 359 LFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYF 418
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G++E ++++F+ M K++ +WT M+ GLA +G+ +E++ +F M + S+TP+E+T +
Sbjct: 419 KCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIG 478
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
V+ AC+H GLV KG +F++M + IKPN HY C+VD+L R+G L EA + I +MP +
Sbjct: 479 VMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVK 538
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
P+S W SLL C+ +KN Q+AE A + +L E+ A YVLL NIYA+ +W + NVR
Sbjct: 539 PNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVR 598
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
K+M E+G++K GCS +E+ V+ F +P+
Sbjct: 599 KMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQ 633
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 198/428 (46%), Gaps = 39/428 (9%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
+++G + + G + N I F G V + F+ V++W +
Sbjct: 151 LKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLS 210
Query: 158 GFVQNGFSFEALKLFLKLLES--GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
G+ + E+ +LF+++ + V PN VT + AC+++ D G ++ K G
Sbjct: 211 GYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGI 270
Query: 216 -EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
E ++ + N+LI + GE+D AR VFD M+ RDV+SWT I+ F + AR+ FD
Sbjct: 271 VEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFD 330
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+MPER+ VSW+ MI Y + +E LFR M + KP+ +L+A A L AL
Sbjct: 331 QMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALEL 390
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G ++ K I+ D FI NALID+Y KCG + + +F+ + +KD +W +MI G
Sbjct: 391 GEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKD---KFTWTAMIVG 447
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
NG EEA +F+ ML + P++ T+
Sbjct: 448 LANNGHGEEA-------------------------------LTMFSYMLEASVTPDEITY 476
Query: 455 SSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
V+CA V + KGK + ++ G ++ + D ++G ++ + V MP
Sbjct: 477 IGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMP 536
Query: 514 DK-NEISW 520
K N I W
Sbjct: 537 VKPNSIVW 544
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 189/376 (50%), Gaps = 17/376 (4%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
E GD+ AR++FDE+P+ + W+ MI Y++ E L++ M ++ KP+ F
Sbjct: 81 ESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPF 140
Query: 322 VLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+L AL+ G + H + G ++ ++F+ I L+S CG R +FD
Sbjct: 141 LLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDM---G 197
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR------NDVSWSAIISGYLEHKQFDL 434
D VV+WN ++ GY + EE+K LF M K+ N V+ ++S + K
Sbjct: 198 DGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVG 257
Query: 435 VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
++N+ + G + PN ++++ AS ++ + + ++ DV T++
Sbjct: 258 GKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMK----TRDVISWTSIV 313
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
+A + I+ +R+ FD+MP+++ +SWT M+ G KE + LF +M+ +++ P+E
Sbjct: 314 TGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEF 373
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T++S+L AC+H G ++ G ++ + IK + ++DM + G + +A+ N
Sbjct: 374 TMVSILTACAHLGALELG-EWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNE 432
Query: 614 MPFEPDSNAWASLLSG 629
M + D W +++ G
Sbjct: 433 MQ-KKDKFTWTAMIVG 447
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 171/391 (43%), Gaps = 71/391 (18%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+L++ N +I+ G ++ A+ +FD M R+ +SWT++++GF R++ + YF++ P
Sbjct: 274 NLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMP 333
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++ +SWTA I G+++ E L LF + S VKP+E T SI ACA + LG
Sbjct: 334 ERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEW 393
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
I K + + N+LI + K G V+ A+ +F+ M+K+D +WT
Sbjct: 394 AKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWT----------- 442
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
MI +G+ EEA +F M S P+ + V+ A
Sbjct: 443 --------------------AMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCA 482
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ + G H F SN + + G ++ ++ H
Sbjct: 483 CTHVGLVAKGKH--------------FFSNMAV---------QHG-------IKPNLTH- 511
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+ M+ G G ++EA E+ NMP K N + W +++ HK L NE+L
Sbjct: 512 --YGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEIL- 568
Query: 445 SGEI-PNKSTFSSVLCASASVASLEKGKDLH 474
E+ P +LC A+ +K K+LH
Sbjct: 569 --ELEPENGAVYVLLC--NIYAACKKWKNLH 595
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/625 (29%), Positives = 340/625 (54%), Gaps = 35/625 (5%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V +++ ++ G ++ A RLF + E +++ G++K V+ ++ F+ P ++
Sbjct: 175 VAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERD 234
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW + Q+G EAL + + + GV+ + T++S ACA ++ R G +
Sbjct: 235 VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQL-- 292
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
H V +L + D + +++++ + G E
Sbjct: 293 ---------HAQVIRNLPCI--------------------DPYVASALVELYAKCGCFKE 323
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A+ +F+ + +RN V+W+V+IA + Q G E+ LF QM + + ++S S
Sbjct: 324 AKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCS 383
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L G +H+ LK G + V +SN+LI +Y+KC + +F + EKD+ VSW
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDI---VSW 440
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
SMI + G + +A+E FD M +N ++W+A++ Y++H + ++N ML ++
Sbjct: 441 TSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDV 500
Query: 449 -PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ T+ ++ A + + + G + G+ +K+G D + A+ Y+K G I +R+
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARK 560
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VFD + K+ +SW M+ G ++ G K++I +F+++ K P+ ++ ++VL CSHSGL
Sbjct: 561 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 620
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
V +G YF+ M+ ++NI P H++C+VD+L R+G L+EA+D I+ MP +P + W +LL
Sbjct: 621 VQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALL 680
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
S CK + N ++AE A K++++L Y+L++ IYA AG+ D+ +RKLM +KG++K
Sbjct: 681 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 740
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNPK 712
+ G SW+EV N+VH F +P+
Sbjct: 741 NPGYSWMEVNNKVHVFKADDVSHPQ 765
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/566 (24%), Positives = 287/566 (50%), Gaps = 25/566 (4%)
Query: 89 VHNCMINANIQWGNLEEAQRLF-DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+ N +++A + G L +A+RL + N ++ +++G++K GR+ +++ F R P +
Sbjct: 41 LQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPAR 100
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSV 206
+V SW + G+ Q+ +L+ F+ + SG PN TF+ K+C + + L L +
Sbjct: 101 DVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQL 160
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G++ K G + V +L+ + ++ G VDLA +F R+++ + +L +++ +
Sbjct: 161 LGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGV 220
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A +FD MPER+ VSW++M++ +QSG EA + M + +++ ++ L+A
Sbjct: 221 DHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC 280
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L +LR G +HA V++ D ++++AL++LY+KCG K+ + VF+S+ +++ V
Sbjct: 281 ARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRN---NV 337
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+W +I G+ +G E+ ELF+ M + + + +ISG L + +
Sbjct: 338 AWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLC 397
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L SG+I +S++ A +L+ + I + D+ T++ +++ G+I
Sbjct: 398 LKSGQIQAVVVSNSLISMYAKCDNLQSAE----SIFRFMNEKDIVSWTSMITAHSQVGNI 453
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFA 561
+R FD M KN I+W M+ + G ++ + ++ M + + P+ +T +++
Sbjct: 454 AKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKG 513
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DFINSMPFEP 618
C+ G G + + + + V+ M S+ GR+ EA DF+N
Sbjct: 514 CADLGANKLGDQIIGRTVKV-GLILDTSVANAVITMYSKCGRILEARKVFDFLNV----K 568
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
D +W ++++G Y + ++A++
Sbjct: 569 DIVSWNAMITG---YSQHGMGKQAIE 591
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 235/492 (47%), Gaps = 51/492 (10%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K L A +++++L D V + ++ + G +EA+ +F+ + +RN V+WT LI+GF++
Sbjct: 290 KQLHA-QVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQ 348
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
HG ES+ F N E + L ++ +++
Sbjct: 349 HGCFTESVELF--------------------NQMRAELMTL-----------DQFALATL 377
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
C D LG + L K+G + V V NSLI++ K + A S+F M ++D+
Sbjct: 378 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDI 437
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TR 309
VSWT ++ ++G++ +AR FD M +N ++W+ M+ Y Q G E+ R++ M +
Sbjct: 438 VSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSE 497
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+P+ + + A L A + G + +K+G+ D ++NA+I +YSKCG +
Sbjct: 498 KDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILE 557
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
R VFD + KD +VSWN+MI GY +G ++A E+FD++ KR + +S+ A++SG
Sbjct: 558 ARKVFDFLNVKD---IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 614
Query: 426 YLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
+ F+ M I P FS ++ L + KDL I ++
Sbjct: 615 CSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDL---IDEMPMKP 671
Query: 485 DVFLGTALTDTYAKSGDIE----SSRRVFD-RMPDKNEISWTVMVRGLAESGYAKESINL 539
+ AL G+ E +++ VF+ PD S+ +M + A++G + +S +
Sbjct: 672 TAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSG--SYMLMAKIYADAGKSDDSAQI 729
Query: 540 FEEMEKTSITPN 551
+ M I N
Sbjct: 730 RKLMRDKGIKKN 741
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 154/327 (47%), Gaps = 44/327 (13%)
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH--VVSWNSMIGGYG 396
H ++ +G+ VF+ N L+ Y CG D R ++ D+AH V++ N M+ GY
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDAR----RLLLTDIAHPNVITHNVMLNGYV 82
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE-IPNKSTFS 455
G++ +A ELF MP R+ SW+ ++SGY + +Q+ F M SG+ PN TF+
Sbjct: 83 KLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFA 142
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR-------- 507
+ + ++ L G + K G D + AL D + + G ++ + R
Sbjct: 143 YAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEP 202
Query: 508 -----------------------VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
+FD MP+++ +SW +MV L++SG +E++++ +M+
Sbjct: 203 TIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQ 262
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY--TCVVDMLSRSG 602
+ + T S L AC+ + G + + I N+ P Y + +V++ ++ G
Sbjct: 263 SKGVRLDSTTYTSSLTACARLSSLRWGKQLH--AQVIRNL-PCIDPYVASALVELYAKCG 319
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSG 629
EA+ NS+ + ++ AW L++G
Sbjct: 320 CFKEAKGVFNSL-HDRNNVAWTVLIAG 345
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 35/293 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH +K+G + ++ L+ MY A I + +N D+V MI A+ Q
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQ 449
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+ +A+ FDGM +N ++W A++ +++HG E+ + + NV+
Sbjct: 450 VGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMY------NVM--------- 494
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
L E V+P+ VT+ ++ K CA++ +LG + G K G
Sbjct: 495 ---------------LSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDT 539
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
SV N++IT+ K G + AR VFD + +D+VSW ++ + + G +A IFD++ +R
Sbjct: 540 SVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKR 599
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
+ +S+ +++ + SG +E F M R ++ P FS ++ L
Sbjct: 600 GAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLG 652
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 218/741 (29%), Positives = 360/741 (48%), Gaps = 123/741 (16%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F+S + C K I S + G LHG ++K G + Y+ L+ +Y + A
Sbjct: 290 AFSSVLSAC----KKIESLEI---GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF-----DGM-PERNEVS--------- 120
I +++ D V +N +IN Q G E+A LF DG+ P+ N ++
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 121 -----------WT-------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+T AL++ + K +E ++ YF +NV+ W +
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 157 CGF-----VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ ++N F ++F ++ + PN+ T+ SI K C + D LG + I
Sbjct: 463 VAYGLLDDLRNSF-----RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K F+ + VC+ LI + K+G++D +W +++
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLD--------------TAWDILI-------------- 549
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
++ VSW+ MIA Y Q + ++A FRQM + + + +SA A L+A
Sbjct: 550 ---RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L+ G +HA G D+ NAL+ LYS+CG
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG-------------------------- 640
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
++EE+ F+ ++++W+A++SG+ + + VF M G N
Sbjct: 641 --------KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF S + A++ A++++GK +H I K G+ + + AL YAK G I + + F
Sbjct: 693 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+ KNE+SW ++ ++ G+ E+++ F++M +++ PN +T++ VL ACSH GLVDKG
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
+ YF SM Y + P HY CVVDML+R+G LS A++FI MP +PD+ W +LLS C
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV-RKLMTEKGLRKSGG 690
+KN +I E A +L +L E A YVLLSN+YA + +W DA ++ R+ M EKG++K G
Sbjct: 873 VHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW-DARDLTRQKMKEKGVKKEPG 931
Query: 691 CSWVEVRNQVHFFFQKTDHNP 711
SW+EV+N +H F+ ++P
Sbjct: 932 QSWIEVKNSIHSFYVGDQNHP 952
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 158/648 (24%), Positives = 283/648 (43%), Gaps = 117/648 (18%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYL------GSRKSLEA---------NEIVKDLN 83
+GR LH ++K G+ L+ +L YL G+ K + N+++K+L
Sbjct: 103 EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 162
Query: 84 GFDL-----------VVHNCMINANIQWGNLE---------------EAQRLFDGMPERN 117
+L V N N G LE A+ L+ G+ +
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
V LI + ++G V+ + F+ ++ SW A I G +N EA++LF +
Sbjct: 223 VVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV 281
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
G+ P FSS+ AC +I +G + GL+ K GF VCN+L++L +G +
Sbjct: 282 LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A +F M +RD V+++ +I +Q GY
Sbjct: 342 AEHIFSNMSQRDA-------------------------------VTYNTLINGLSQCGYG 370
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
E+A LF++M +P+++ + ++ A ++ L G +HA+ K+G + I AL
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
++LY+KC D D +E +V +VV WN M+ YG L D++ RN
Sbjct: 431 LNLYAKCA---DIETALDYFLETEVENVVLWNVMLVAYG----------LLDDL--RNS- 474
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
F +F +M + +PN+ T+ S+L + LE G+ +H +I
Sbjct: 475 ------------------FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F + ++ + L D YAK G ++++ + R K+ +SWT M+ G + + +++
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
F +M I +E+ + + + AC+ + +G + ++ + + +V +
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTL 635
Query: 598 LSRSGRLSEAEDFINSMPFEP----DSNAWASLLSGCKTYKNEQIAER 641
SR G++ E+ + FE D+ AW +L+SG + N + A R
Sbjct: 636 YSRCGKIEES-----YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 151/354 (42%), Gaps = 71/354 (20%)
Query: 313 KPNTSCFSIVLSA-LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+PN +L L + +L G +H+ +LK+G++ + +S L D Y G+
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD + E+ + +WN MI KEL RN +
Sbjct: 141 KVFDEMPERT---IFTWNKMI------------KEL----ASRNLIGE------------ 169
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
VF +F M+ PN+ TFS VL C SVA + + +H +I+ G +
Sbjct: 170 ---VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA-FDVVEQIHARILYQGLRDSTVVC 225
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
L D Y+++G ++ +RRVFD + K+ SW M+ GL+++ E+I LF +M I
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 550 PNELTILSVLFACSH----------SGLVDK-GLK------------YFN-----SMEPI 581
P SVL AC GLV K G YF+ S E I
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 582 YN--IKPNGRHYTCVVDMLSRSGRLSEAEDFINSM---PFEPDSNAWASLLSGC 630
++ + + Y +++ LS+ G +A + M EPDSN ASL+ C
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 449 PNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN T +L C + SL++G+ LH +I+KLG + L L D Y GD+ +
Sbjct: 82 PNHQTLKWLLEGCLKTN-GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VFD MP++ +W M++ LA E LF M ++TPNE T VL AC
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 567 LVDKGLKYFNSMEPIY-NIKPNGRHYTCVV-----DMLSRSGRLSEAEDFINSMPFEPDS 620
+ F+ +E I+ I G + VV D+ SR+G + A + + + D
Sbjct: 201 VA------FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DH 253
Query: 621 NAWASLLSGCKTYKNEQIAE 640
++W +++SG KNE AE
Sbjct: 254 SSWVAMISGLS--KNECEAE 271
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 219/708 (30%), Positives = 353/708 (49%), Gaps = 109/708 (15%)
Query: 78 IVKDLNGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
IVK GFD + N + ++ + +A++LFD MP RN S ++SG++K +
Sbjct: 37 IVK--TGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLF 94
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC---- 191
+ FE +N +SWT I G+ QN EA L+ ++ SGVKP+ +TF+++
Sbjct: 95 RARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFD 154
Query: 192 -----KACAEIND--FRLGLSVFGLIFKAGFEKHVSVC--------------------NS 224
K +I+ R G S ++F + + + C N
Sbjct: 155 DTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNV 214
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVS-------------------------------- 252
+IT K G + A +F +M D
Sbjct: 215 MITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTS 274
Query: 253 --WTV-----ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
W + +LD + + + A+ +FDEMPE + VS++++I Y +G E++F LF+
Sbjct: 275 YVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFK 334
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
++ SF F+ +LS A L G HA + +V + NAL+D+Y+KC
Sbjct: 335 RLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCE 394
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ E+A +F N+ RN V W+AIIS
Sbjct: 395 ----------------------------------KFEDANRIFANLAYRNSVPWTAIISI 420
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
Y++ + +F EM +++TF+S L ASA++AS+ GK LH +I+LG
Sbjct: 421 YVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSS 480
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
VF G+ L D YA G ++ + VF MPD+N + W ++ +++G A+ + + F +M +
Sbjct: 481 VFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIE 540
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ + P+ ++ LSVL ACSH GLV+K L YFNSM +Y + P +HY ++D+L RSGR +
Sbjct: 541 SGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFN 600
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL-AEEHPAGYVLLSNIY 664
EAE+ I+ MPFEPD W+S+L+ C+ +KN+ +A++A L+K+ A A YV +SNIY
Sbjct: 601 EAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIY 660
Query: 665 ASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A AG+W +A V+K M E+G++K SWVE+ ++VH F +P+
Sbjct: 661 AEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQ 708
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 106/292 (36%), Gaps = 67/292 (22%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR H + T E + L+ MY K
Sbjct: 364 GRQTHAQAVVTTAVSEVQVGNALVDMYAKCEK---------------------------- 395
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
E+A R+F + RN V WTA+IS +
Sbjct: 396 ---FEDANRIFANLAYRNSVPWTAIISIY------------------------------- 421
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
VQ GF EALK+F ++ V ++ TF+S KA A + LG + + + G V
Sbjct: 422 VQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSV 481
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+ L+ + G + A VF M R++V W ++ + + GD F +M E
Sbjct: 482 FSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIES 541
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSAL 326
+ VS+ ++ + G E+A F MT+ Y P ++ ++ L
Sbjct: 542 GLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVL 593
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 119/304 (39%), Gaps = 59/304 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ LH +I+ G+ + + L+ MY NC
Sbjct: 465 GKQLHSSVIRLGLLSSVFSGSVLVDMYA-----------------------NC------- 494
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF----ERNPFQNVISWTAA 155
G++++A +F MP+RN V W ALIS + ++G E + F E + + +S+ +
Sbjct: 495 -GSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSV 553
Query: 156 ICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
+ G +AL F + + + P ++++ F LI +
Sbjct: 554 LTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFN---EAENLISEMP 610
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLGEAR 270
FE + +S++ DLA+ D++ K RD ++ + +++ E G A
Sbjct: 611 FEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAA 670
Query: 271 RIFDEMPERN----------EVSWSVMIARYNQSGYPE-EAFR-----LFRQMTRYSFKP 314
++ M ER E+ V + N +P+ E R L M + +KP
Sbjct: 671 KVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKP 730
Query: 315 NTSC 318
+TSC
Sbjct: 731 DTSC 734
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 96/229 (41%), Gaps = 38/229 (16%)
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP------------------- 513
+ +I+K GF ++ ++ I +R++FD MP
Sbjct: 33 VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92
Query: 514 ------------DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+NE+SWT+M+ G +++ KE+ NL+ EM ++ + P+ +T ++L
Sbjct: 93 LFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSG 152
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
+ + + L+ +S + + + +VD ++ L A + MP DS
Sbjct: 153 FDDTTTLKEVLQ-IHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMP-TKDSV 210
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKL--AEEHPAGYVLLSNIYASAG 668
++ +++G Y E A+K ++ + P+G+ + + S G
Sbjct: 211 SFNVMITG---YTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVG 256
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 326/605 (53%), Gaps = 52/605 (8%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
GN+E A+ F+ MP R S+ AL++G+ ++ + ++ F R P +++ S+ A I G
Sbjct: 31 GNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLS 90
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL-IFKAGFEK-H 218
+ L + P+ V+F+S+ + R GL + +F+ E+ H
Sbjct: 91 LRRQTLPDAAAALASIP--FPPSVVSFTSLLRGYV-----RHGLLADAIRLFQQMPERNH 143
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
VS L L L G V+ AR +FD M RDVV+WT +L + + G + EAR +FDEMP+
Sbjct: 144 VSYTVLLGGL-LDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPK 202
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
RN VSW+ MI+ Y Q+G A +LF M
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMP------------------------------ 232
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
E++ A++ Y + G +D +F+++ E VA + N+M+ G+G
Sbjct: 233 ---------ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVA---ACNAMMVGFGQR 280
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G ++ AK +F+ M +R+D +WSA+I Y +++ + F EML G PN + S+L
Sbjct: 281 GMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISIL 340
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A++A L+ G+++H +++ F DVF +AL Y K G+++ ++RVF K+ +
Sbjct: 341 TVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIV 400
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W M+ G A+ G ++++ +F +M ++P+ +T + L ACS++G V +G + FNSM
Sbjct: 401 MWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSM 460
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+I+P HY+C+VD+L RSG + EA D I +MP EPD+ W +L+ C+ ++N +I
Sbjct: 461 TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEI 520
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
AE A K L +L + YVLLS+IY S GRW DA +RK ++ + L KS GCSW+E
Sbjct: 521 AEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDK 580
Query: 699 QVHFF 703
+VH F
Sbjct: 581 RVHLF 585
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 183/414 (44%), Gaps = 77/414 (18%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T LL L + + EA + ++ D+V M++ Q G + EA+ LFD MP+RN V
Sbjct: 147 TVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV 206
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SWTA+ISG+ ++G V + FE P +N +SWTA + G++Q G +A +LF + E
Sbjct: 207 SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHP 266
Query: 180 VKP---------------------------NEVTFSSICKACAEINDFRL-GLSVFGLIF 211
V ++ T+S++ KA E N+F + LS F +
Sbjct: 267 VAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKA-YEQNEFLMEALSTFREML 325
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLG 267
G + S++T+ + +D R V M + DV + + ++ ++I+ G+L
Sbjct: 326 WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLD 385
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A+R+F ++ V W+ MI Y Q G E+A +F M P+ + L+A
Sbjct: 386 KAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTAC- 444
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDV 382
S G+ K+GR +F+S+ +
Sbjct: 445 ----------------------------------SYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLV 435
H ++ M+ G +G +EEA +L NMP D V W A++ H+ ++
Sbjct: 471 EH---YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 197/619 (31%), Positives = 347/619 (56%), Gaps = 10/619 (1%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +I+ + G L EA +LFD MPERN +W A+I ++K ++++ F+ P ++++
Sbjct: 27 NQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQNLKQARELFDSAPSKDLV 86
Query: 151 SWTAAICGFVQ-NGFSFEALKLFLKL--LESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
++ + + G++ +G+ ALKLF+++ L + +E + + + A+++ G +
Sbjct: 87 TYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSLTRMLNLSAKLSMESYGKQLH 146
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDL 266
+ K +SLI + K G VFD D+VS ++ G+L
Sbjct: 147 SYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCAGVLDLVSKNAMVAACCREGEL 206
Query: 267 GEARRIFDEMPERNEV-SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+F E N+V SW+ +I+ Y Q+G E+A +LF M + N + +LSA
Sbjct: 207 EMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDALKLFVHMEENEVRWNEHTIAGLLSA 266
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L++L+ G VH VLK + + FIS+ L+D+Y KCG K LV+ +I +
Sbjct: 267 CAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKCGNMKYAELVYATI---GTGNA 323
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
S SMI G+ G M EA+ LFD++ +++ + W+A+ +GY++ +Q + VF + +E +
Sbjct: 324 FSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKSQQCEAVFELLSEFRVK 383
Query: 446 -GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+P+ SVL A A A+L GK +H ++++G D L +A+ D Y+KSG+I+
Sbjct: 384 EAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIELDEKLVSAMVDMYSKSGNIKY 443
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ ++F R+ +++ + + +M G A G+ ++I FEEM + + P+ +T +++L AC H
Sbjct: 444 AEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLSACRH 503
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
GLV+ G KYF SM YNI P HY C++D+ R+ +L +A F+ +P EPD+
Sbjct: 504 CGLVELGEKYFASMTD-YNILPEIDHYACMIDLYGRANQLEKAVAFMKRIPIEPDAVILG 562
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+ L+ C+ +N ++A A + + ++ ++ A YV L+N+YA+ G+W++ +R+ M E
Sbjct: 563 AFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANVYAAEGKWVEMGRIRRKMRENE 622
Query: 685 LRKSGGCSWVEVRNQVHFF 703
++K GCSWV V N+VH F
Sbjct: 623 IKKFAGCSWVYVENRVHIF 641
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 213/434 (49%), Gaps = 39/434 (8%)
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K G V N LI L K G + A +FD M +R+V +W I+ +I+ +L +AR
Sbjct: 15 IKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQNLKQAR 74
Query: 271 RIFDEMPERNEVSWSVMIARY-NQSGYPEEAFRLFRQMTRYSFKPNTSCFSI--VLSALA 327
+FD P ++ V+++ M++ Y N GY A +LF +M + + FS+ +L+ A
Sbjct: 75 ELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSLTRMLNLSA 134
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L G +H++++K F ++LID+YSKCG ++ VFD V +VS
Sbjct: 135 KLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCA--GVLDLVS 192
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
N+M+ G++E LF + ND VSW+ +ISGY+++ + +F M +
Sbjct: 193 KNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDALKLFVHMEENE 252
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE--- 503
N+ T + +L A A + SL+ GK++HG ++K ++ F+ + L D Y K G+++
Sbjct: 253 VRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKCGNMKYAE 312
Query: 504 ----------------------------SSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
+RR+FD + +K+ I WT + G +S +
Sbjct: 313 LVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKSQQCEA 372
Query: 536 SINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
L E K ++ P+ L ++SVL AC+ ++ G K ++ I+ + + + +
Sbjct: 373 VFELLSEFRVKEAMVPDALILISVLGACAIQAALNPG-KQIHAYVLRIGIELDEKLVSAM 431
Query: 595 VDMLSRSGRLSEAE 608
VDM S+SG + AE
Sbjct: 432 VDMYSKSGNIKYAE 445
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 164/367 (44%), Gaps = 70/367 (19%)
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+++++ G HAH +K GI VF SN LI LYSK G + +FD + E++ V +W
Sbjct: 1 MRSIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERN---VFTW 57
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEML-LSG 446
N++I Y +++A+ELFD+ P ++ V++++++SGY+ ++ +F EM L+
Sbjct: 58 NAIIWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLND 117
Query: 447 EIP-NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
E ++ + + +L SA ++ GK LH ++K F ++L D Y+K G
Sbjct: 118 ETRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREV 177
Query: 506 RRVFD------RMPDKNE---------------------------ISWTVMVRGLAESGY 532
+VFD + KN +SW ++ G ++G
Sbjct: 178 CQVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGC 237
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACS--------------------------HSG 566
++++ LF ME+ + NE TI +L AC+ SG
Sbjct: 238 EEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSG 297
Query: 567 LVDKGLKYFN--SMEPIYNIKPNGRHY--TCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
LVD K N E +Y G + T ++ S G + EA +S+ E S
Sbjct: 298 LVDVYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLT-EKSSII 356
Query: 623 WASLLSG 629
W +L +G
Sbjct: 357 WTALFTG 363
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/629 (30%), Positives = 335/629 (53%), Gaps = 77/629 (12%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
L+ + K G V +++ F+ P N +S+TA + G Q G +AL+LF ++ +G++
Sbjct: 182 GLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRV 241
Query: 183 NEVTFSSICKACAEI--NDF------RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ V SS+ ACA+ D+ +L S+ L+ + GF V NSL+ L K +
Sbjct: 242 DPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMK 301
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMG------------------------------ 264
+D A VF+ + +VSW +++ + ++G
Sbjct: 302 MDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLAS 361
Query: 265 -----DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
D+ AR +FD++P+ + +W+ +++ Y Q +E LFR+M + +P+ +
Sbjct: 362 CIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTL 421
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+++LS+ + L G VH+ +++ + D+F+++ LID+YSKCG+ ++F+ + E
Sbjct: 422 AVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTE 481
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
R+ V W+++ISG H + F
Sbjct: 482 ----------------------------------RDVVCWNSMISGLAIHSLSEEAFDFL 507
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+M +G P +S+++S++ A ++S+ +G+ +H +++K G+ +V++G +L D YAKS
Sbjct: 508 KQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKS 567
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G+++ +R F+ M KN ++W M+ G A++G+ ++++ LFE M T P+ +T ++VL
Sbjct: 568 GNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVL 627
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
CSHSGLVD+ + +FNSME Y I P HYTC++D L+R+ R +E E I MP++ D
Sbjct: 628 TGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDD 687
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
W LL+ C + N ++ E + K+L++L ++P+ YVLLSNIYA+ GR DA VR L
Sbjct: 688 PILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRAL 747
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
M+ +G+ K G SWV ++ F D
Sbjct: 748 MSSRGVVKGRGYSWVNHKDGSRAFMVADD 776
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 154/649 (23%), Positives = 277/649 (42%), Gaps = 117/649 (18%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
+A H ++ G+ + +L RL+ +Y L+G
Sbjct: 30 KAAHARVLAAGLAADTFLLNRLVELY--------------SLSGLPC------------- 62
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
A R F +P N S+ A IS + G + + R P +N +SW I
Sbjct: 63 ----HALRAFRALPHPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVA 118
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
++G EAL+++ +L+ G+ P T +S+ AC + G GL K G + H
Sbjct: 119 RSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQF 178
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V N L+ + K G V A +FD M + VS+T + MG L
Sbjct: 179 VENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAM------MGGLA------------- 219
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS--------LKAL 332
Q G ++A RLF +M+R + + S VL A A +A+
Sbjct: 220 ------------QGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAI 267
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
+ +HA V++ G D + N+L+DLY+K + + VF+S+ +VSWN +I
Sbjct: 268 QLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSS---VSIVSWNILI 324
Query: 393 GGYGLNGQMEEAKE-----------------------------------LFDNMPKRNDV 417
GYG G E A E +FD +PK +
Sbjct: 325 TGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVT 384
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+W+ ++SGY + + +F M P+++T + +L + + + + E GK +H
Sbjct: 385 TWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSAS 444
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
++L D+F+ + L D Y+K G + + +F+ M +++ + W M+ GLA ++E+
Sbjct: 445 VRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAF 504
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEPIYNIKPNGRHYTC-VV 595
+ ++M + + P E + S++ C+ + +G + + ++ Y+ + C ++
Sbjct: 505 DFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYD---QNVYVGCSLI 561
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
DM ++SG + +A F N M + + AW ++ G Y E+AV+
Sbjct: 562 DMYAKSGNMDDARLFFNCMIVK-NLVAWNEMIHG---YAQNGFGEKAVE 606
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 232/494 (46%), Gaps = 47/494 (9%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
+++H +++ G ++++ L+ +Y K EA ++ + L+ +V N +I Q
Sbjct: 271 QSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQL 330
Query: 101 GNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
G E A + + M E NEV+++ +++ +K V + F++ P +V +W +
Sbjct: 331 GCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLL 390
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+ Q E + LF ++ V+P+ T + I +C+ + +F LG V +
Sbjct: 391 SGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLH 450
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ V + LI + K G+V +A +F+ M +RDV
Sbjct: 451 NDMFVASGLIDIYSKCGQVGIALIIFNMMTERDV-------------------------- 484
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
V W+ MI+ EEAF +QM P S ++ +++ A L ++ G
Sbjct: 485 -----VCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGR 539
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+HA VLK G +++V++ +LID+Y+K G D RL F+ ++ K+ +V+WN MI GY
Sbjct: 540 QMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKN---LVAWNEMIHGYA 596
Query: 397 LNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNK 451
NG E+A ELF+ M K + V++ A+++G D FN M + G P
Sbjct: 597 QNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLV 656
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFP--YDVFLGTALTDTYAKSGDIESSRRVF 509
++ ++ A A A + + + GK+ P ++V L + A+ G+ S++ +F
Sbjct: 657 EHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEF-SAKHLF 715
Query: 510 DRMPDKNEISWTVM 523
R+ KN + ++
Sbjct: 716 -RLDPKNPSPYVLL 728
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 214/491 (43%), Gaps = 61/491 (12%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ AG + N L+ L G A F + +V S+ + GDL A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAACRAGDLAAA 95
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R + MP+RN VSW+ +IA +SG P EA +++ M + P + VLSA ++
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAV 155
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
AL G H +K+G++ F+ N L+ +Y+KCG D +FD + + VS+
Sbjct: 156 AALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPN---EVSFT 212
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+M+GG G +++A LF M + +G
Sbjct: 213 AMMGGLAQGGAVDDALRLFARMSR-------------------------------TGIRV 241
Query: 450 NKSTFSSVL--CASASVA------SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+ SSVL CA A +++ + +H +++ GF D +G +L D YAK
Sbjct: 242 DPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMK 301
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + +VF+ + + +SW +++ G + G + ++ + E M+++ PNE+T ++L +
Sbjct: 302 MDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLAS 361
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FEP 618
C + V F+ + KP+ + ++ + E D M +P
Sbjct: 362 CIKARDVPSARAMFDKIP-----KPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQP 416
Query: 619 DSNAWASLLSGCKTYKN----EQIAERAVKNLWKLAEEHPAGYVL--LSNIYASAGRWID 672
D A +LS C N +Q+ +V+ L H +V L +IY+ G+
Sbjct: 417 DRTTLAVILSSCSRLGNFELGKQVHSASVRLLL-----HNDMFVASGLIDIYSKCGQVGI 471
Query: 673 AMNVRKLMTEK 683
A+ + +MTE+
Sbjct: 472 ALIIFNMMTER 482
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 168/352 (47%), Gaps = 21/352 (5%)
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HA VL G+ D F+ N L++LYS G F ++ +V S+N+ I
Sbjct: 33 HARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNV---YSYNAAISAACRA 89
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G + A++L MP RN VSW+ +I+ ++ ML G P T +SVL
Sbjct: 90 GDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVL 149
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A +VA+L+ G+ HG +K+G F+ L Y K G + + R+FD MP NE+
Sbjct: 150 SACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEV 209
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD----KGLKY 574
S+T M+ GLA+ G +++ LF M +T I + + + SVL AC+ + D + ++
Sbjct: 210 SFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQL 269
Query: 575 FNSMEPIYNIKPNG--RHY-TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
S+ + K G +H +VD+ ++ ++ EA S+ +W L++G
Sbjct: 270 AQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLS-SVSIVSWNILITG-- 326
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGY----VLLSNIYASAGRWIDAMNVRKL 679
Y ERA++ L + E +G+ V SN+ AS + D + R +
Sbjct: 327 -YGQLGCYERAMEVLEFMQE---SGFEPNEVTYSNMLASCIKARDVPSARAM 374
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 124/281 (44%), Gaps = 57/281 (20%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E+S+ S I C L + + QGR +H ++K G + Y+ L+ MY S
Sbjct: 519 ESSYASMINLCARL-------SSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKS---- 567
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
GN+++A+ F+ M +N V+W +I G+ ++G
Sbjct: 568 ---------------------------GNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGF 600
Query: 134 VEESMWYFE------RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES--GVKPNEV 185
E+++ FE + P + +++ A + G +G EA+ F +ES G+ P
Sbjct: 601 GEKAVELFEYMLTTKQKP--DSVTFIAVLTGCSHSGLVDEAVT-FFNSMESNYGITPLVE 657
Query: 186 TFSSICKACAEINDFRLGLSVFG-LIFKAG---FEKHVSVCNSLITLSLKMGEVDLARSV 241
++ + A A F +V G + +K +E ++ C ++ + ++GE A+ +
Sbjct: 658 HYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAAC--VVHHNAELGEFS-AKHL 714
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
F R++ ++ + ++ +++ +G G+A + M R V
Sbjct: 715 F-RLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVV 754
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/598 (33%), Positives = 319/598 (53%), Gaps = 66/598 (11%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E N TA++S + K +++ + FER ++++SWT + G+ QNG + AL+L L+
Sbjct: 177 ESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQ 236
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ E+G KP+ VT SI A A++ R+G S+ G F++GFE V+V N+L
Sbjct: 237 MQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNAL--------- 287
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
LD++ + G AR +F M + VSW+ MI Q+
Sbjct: 288 ----------------------LDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQN 325
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G EEAF F +M P VL A A+L L G VH + K+ ++ +V +
Sbjct: 326 GESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVM 385
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
N+LI +YSKC +++ A +F+N+ K
Sbjct: 386 NSLISMYSKCK----------------------------------RVDIAASIFNNLEKT 411
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
N V+W+A+I GY ++ +F M G + T V+ A A + + K +H
Sbjct: 412 N-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIH 470
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
G ++ +VF+ TAL D YAK G I+++R++FD M +++ I+W M+ G G K
Sbjct: 471 GLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGK 530
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E+++LF EM+K ++ PN++T LSV+ ACSHSG V++GL F SM+ Y ++P HY+ +
Sbjct: 531 ETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAM 590
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L R+G+L +A +FI MP +P + ++L CK +KN ++ E+A + L+KL +
Sbjct: 591 VDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEG 650
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+VLL+NIYAS W VR M +KGL K+ GCSWVE+RN++H F+ + ++P+
Sbjct: 651 GYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPE 708
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 242/512 (47%), Gaps = 68/512 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T +IS F K G E+ FE + + + + G+ +N +AL FL+++ V+
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
++ + + C E D + G + GLI GFE ++ V ++++L K ++D A +
Sbjct: 143 LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKM 202
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+RM+ +D+VSWT ++A Y Q+G+ + A
Sbjct: 203 FERMQHKDLVSWT-------------------------------TLVAGYAQNGHAKRAL 231
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+L QM KP++ +L A+A +KALR G +H + + G E V ++NAL+D+Y
Sbjct: 232 QLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMY 291
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG + RLVF + K VVSWN+MI G NG+ EEA
Sbjct: 292 FKCGSARIARLVFKGMRSKT---VVSWNTMIDGCAQNGESEEA----------------- 331
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
FA F +ML GE+P + T VL A A++ LE+G +H + KL
Sbjct: 332 --------------FATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLK 377
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+V + +L Y+K ++ + +F+ + +K ++W M+ G A++G KE++NLF
Sbjct: 378 LDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFC 436
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M+ I + T++ V+ A + V++ K+ + + + N T +VDM ++
Sbjct: 437 MMQSQGIKLDCFTLVGVITALADFS-VNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKC 495
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
G + A + M E W +++ G T+
Sbjct: 496 GAIKTARKLFDMMQ-ERHVITWNAMIDGYGTH 526
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 202/444 (45%), Gaps = 80/444 (18%)
Query: 26 CLLKDITSQNLVIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
CLL+ + +NL ++ GR +HG +I G ++ T ++ +Y R+ A ++ + +
Sbjct: 150 CLLQ-LCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQH 208
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE-------------------------- 118
DLV ++ Q G+ + A +L M E +
Sbjct: 209 KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSI 268
Query: 119 ------------VSWT-ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
V+ T AL+ + K G + F+ + V+SW I G QNG S
Sbjct: 269 HGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGES 328
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
EA FLK+L+ G P VT + ACA + D G V L+ K + +VSV NSL
Sbjct: 329 EEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSL 388
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I++ K VD+A S+F+ +EK + V+W ++ + + G + EA +F M +
Sbjct: 389 ISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQ------ 441
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
G + F L +T ALA R +H ++
Sbjct: 442 ---------GIKLDCFTLVGVIT----------------ALADFSVNRQAKWIHGLAVRA 476
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
++ +VF+S AL+D+Y+KCG K R +FD + E+ HV++WN+MI GYG +G +E
Sbjct: 477 CMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQER---HVITWNAMIDGYGTHGVGKETL 533
Query: 406 ELFDNMP----KRNDVSWSAIISG 425
+LF+ M K ND+++ ++IS
Sbjct: 534 DLFNEMQKGAVKPNDITFLSVISA 557
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 45/349 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L + + GR++HG+ ++G +T LL MY + A + K +
Sbjct: 248 TLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGM 307
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV---------------------SW 121
+V N MI+ Q G EEA F M + EV W
Sbjct: 308 RSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGW 367
Query: 122 ------------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+LIS + K RV+ + F NV +W A I G+ QNG
Sbjct: 368 FVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNG 426
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EAL LF + G+K + T + A A+ + R + GL +A + +V V
Sbjct: 427 CVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVST 486
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ER 279
+L+ + K G + AR +FD M++R V++W ++D + G E +F+EM +
Sbjct: 487 ALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKP 546
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
N++++ +I+ + SG+ EE LF+ M Y +P +S ++ L
Sbjct: 547 NDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLG 595
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/595 (32%), Positives = 322/595 (54%), Gaps = 18/595 (3%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQ---NVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
L+S + ++G V ++ F PF+ N + W + I V +G+ EAL+L+ K+ GV
Sbjct: 76 LVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGV 135
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ TF + +A + + F + ++ + + GF+ H+ V N LI + K+ +D AR
Sbjct: 136 LGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARK 195
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGY 296
VFD+M + VVSW ++ + D+ A R+F +M E N V+W+ +++ + + G+
Sbjct: 196 VFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGH 255
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EE LF +M P ++VLS A L L SG +H +++K G +F NA
Sbjct: 256 LEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNA 315
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR-- 414
LI LY K G D +F E V ++VSWN++I + +G ++A EL + K
Sbjct: 316 LITLYGKGGGVGDAEKLFH---EMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEA 372
Query: 415 ------NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
N ++WSAII G+ + VF +M L+ N T +SVL A +A+L
Sbjct: 373 YPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALN 432
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
G+++HG +I+ +V +G L + Y K G + VF+++ +++ ISW M+ G
Sbjct: 433 LGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYG 492
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G K+++ F M K+ P+ +T ++ L ACSH+GLV +G F+ M + I+P
Sbjct: 493 THGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEI 552
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY C+VD+L R+G + EA + I MP EP++ W+SLL+ C+ +K+ +AE A +
Sbjct: 553 EHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISN 612
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L + ++LLSNI+A++ RW D+ VR KGL+K G SW+EV+ +V+ F
Sbjct: 613 LNSKITGSHMLLSNIFAASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMF 667
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/556 (26%), Positives = 258/556 (46%), Gaps = 75/556 (13%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN------GFD--LVV 89
I+ L+G + G+ + + T LL L + +L A + K+L+ GF L V
Sbjct: 121 IEALQLYGKMRNYGVLGDGF-TFPLL---LRASSNLGAFNMCKNLHCHVVQFGFQNHLHV 176
Query: 90 HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
N +I + +++A+++FD M ++ VSW ++SG+ + V + F + + V
Sbjct: 177 GNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGV 236
Query: 150 ----ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++WT+ + + G E + LF K+ GV P + + CA++ G
Sbjct: 237 EPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQM 296
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + K GF ++ N+LITL K G V A +F M+ +++VSW ++ F E G
Sbjct: 297 IHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGV 356
Query: 266 LGEARRIFDEM------PER--NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+A + ++ PE N ++WS +I + G EE+ +FR+M + K N+
Sbjct: 357 YDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSV 416
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ VLS A L AL G +H HV++ ++ +V + N LI++Y+KCG K G +VF+ +
Sbjct: 417 TIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKL 476
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+D +SWNSMI GYG +G ++A A
Sbjct: 477 ENRD---SISWNSMIAGYGTHGLGKDA-------------------------------LA 502
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTY 496
FN M+ SG P+ TF + L A + + +G L ++ + ++ + D
Sbjct: 503 TFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLL 562
Query: 497 AKSGDIESSRRVFDRMP-DKNEISWTVMVRG--------LAESGYAKESINLFEEMEKTS 547
++G +E + + MP + N W+ ++ LAE AK S NL +
Sbjct: 563 GRAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKIS-NL-----NSK 616
Query: 548 ITPNELTILSVLFACS 563
IT + + +LS +FA S
Sbjct: 617 ITGSHM-LLSNIFAAS 631
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L ++ VH+ + G F+S L+ +YS+ G D R VF S + ++
Sbjct: 45 LRQCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNF 104
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+ WNS+I +G EA +L+ M RN
Sbjct: 105 LLWNSIIRANVYHGYCIEALQLYGKM--RN-----------------------------Y 133
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + + TF +L AS+++ + K+LH +++ GF + +G L YAK ++ +
Sbjct: 134 GVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDA 193
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R+VFD+M K+ +SW MV G A + + +F +ME + PN +T S+L + +
Sbjct: 194 RKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARC 253
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
G +++ + F M + + P V+ + + L+ +
Sbjct: 254 GHLEETMVLFCKMR-MKGVGPTAEMLAVVLSVCADLATLNSGQ 295
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 218/715 (30%), Positives = 354/715 (49%), Gaps = 106/715 (14%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL-EANEIVKDLNGFDLVVHNCMI--- 94
G+ +H H++K+ H + L +L MY G KSL +A ++ + ++V +I
Sbjct: 81 HGKKIHDHMLKSKSHPDLTLQNHILNMY-GKCKSLKDAQKVFDAMPERNVVSWTSVIAGY 139
Query: 95 NANIQWGNLEEA--QRLFDG-MPER---------------------------------NE 118
+ N Q GN E Q L G MP++ +
Sbjct: 140 SQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHI 199
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
++ ALIS + K + +++ F R +++ISW + I GF Q G+ EAL F ++L
Sbjct: 200 IAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQ 259
Query: 179 GVK-PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
GV PNE F S+ AC+ + G + G+ K G
Sbjct: 260 GVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGL---------------------- 297
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
RDV + + D++ + G L AR +F ++ + V+W+ +IA + G
Sbjct: 298 ---------GRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDA 348
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+EA F QM P+ +L A S L GM VH ++ K+G++ DV + N L
Sbjct: 349 KEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTL 408
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+ +Y+KC E +D F+ +M +L V
Sbjct: 409 LTMYAKCSELRDAIFFFE------------------------EMRCNADL---------V 435
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW+AI++ + H Q + VF + M +S P+ T ++VL ASA S+E G +H
Sbjct: 436 SWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYA 495
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+K G D + L D YAK G ++++ ++FD M + + +SW+ ++ G A+ GY +E++
Sbjct: 496 LKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEAL 555
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF+ M + + PN +T + VL ACSH GLV++G K + +ME + I P H +C+VD+
Sbjct: 556 KLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDL 615
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+R+G L+EAE FI+ M F+PD W +LL+ CKT+ N + +RA +N+ K+ + A +
Sbjct: 616 LARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAH 675
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VLL NIYAS G W D +R LM ++G+RK G SW+EV++++H FF + +P+
Sbjct: 676 VLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPE 730
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 229/512 (44%), Gaps = 79/512 (15%)
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLG 267
K GF +S LI+ + ++ + + D M K D+ IL+++ + L
Sbjct: 56 KTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLK 115
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A+++FD MPERN VSW+ +IA Y+Q+G A + QM + P+ F ++ A +
Sbjct: 116 DAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACS 175
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
SL + G +HAHVLK + NALI +Y+K D VF + +D ++S
Sbjct: 176 SLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRD---LIS 232
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG- 446
W SMI G+ G EA F EML G
Sbjct: 233 WGSMIAGFSQLGYELEA-------------------------------LCYFKEMLHQGV 261
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
+PN+ F SV A +S+ E G+ LHG IK G DVF G +L D YAK G + +R
Sbjct: 262 YLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCAR 321
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
VF ++ + ++W ++ G A G AKE+I F +M + P+E+T+ S+L AC+
Sbjct: 322 VVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPS 381
Query: 567 LVDKGLK---YFNSME-----PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
+ +G++ Y N M P+ N ++ M ++ L +A F M
Sbjct: 382 ELYQGMQVHGYINKMGLDLDVPVCNT---------LLTMYAKCSELRDAIFFFEEMRCNA 432
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
D +W ++L+ C + + R +K + +H Y+ L+N+ ++ +
Sbjct: 433 DLVSWNAILTACMRHDQAEEVFRLLKLM--CISQHRPDYITLTNVLGASAETVS------ 484
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+E+ NQVH + KT N
Sbjct: 485 ---------------IEIGNQVHCYALKTGLN 501
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 39/332 (11%)
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+AF ++ T + +T ++ ++SA + L++L G +H H+LK D+ + N ++
Sbjct: 48 KAFEFLQKKTGFCLTLST--YAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHIL 105
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
++Y KC KD A+++FD MP+RN VS
Sbjct: 106 NMYGKCKSLKD----------------------------------AQKVFDAMPERNVVS 131
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+++I+GY ++ Q + +ML SG +P++ TF S++ A +S+ + G+ LH ++
Sbjct: 132 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
K F + AL Y KS I + VF RM ++ ISW M+ G ++ GY E++
Sbjct: 192 KSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 251
Query: 539 LFEEMEKTSI-TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
F+EM + PNE SV ACS S L + + + M + + + + DM
Sbjct: 252 YFKEMLHQGVYLPNEFIFGSVFSACS-SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDM 310
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ G LS A + PD AW ++++G
Sbjct: 311 YAKCGLLSCARVVFYQIG-RPDLVAWNAIIAG 341
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 438 VFNEMLLSGEIPNK--------STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+FNE + + E K ST++ ++ A + + SLE GK +H ++K D+ L
Sbjct: 42 LFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQ 101
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
+ + Y K ++ +++VFD MP++N +SWT ++ G +++G ++ + +M ++ +
Sbjct: 102 NHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVM 161
Query: 550 PNELTILSVLFACSHSGLVDKGLKY----FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
P++ T S++ ACS G + G + S + I N ++ M ++S +
Sbjct: 162 PDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNA-----LISMYTKSNLII 216
Query: 606 EAEDFINSMPFEPDSNAWASLLSG 629
+A D + M D +W S+++G
Sbjct: 217 DALDVFSRMATR-DLISWGSMIAG 239
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/670 (29%), Positives = 366/670 (54%), Gaps = 8/670 (1%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
LL+ +++N R +G +K G I + LL +Y S K A + ++
Sbjct: 12 LLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEMPER 71
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+ N MI + G+ + R FD MPER+ SW +ISGF K G + + F+ P
Sbjct: 72 NYFSWNTMIEGYMNSGDKGTSLRFFDMMPERDGYSWNVVISGFAKAGELSVARRLFDAMP 131
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V++ + + G++ NG+S EAL+LF +L S + +T +++ KACAE+ + G
Sbjct: 132 EKDVVTLNSLLHGYILNGYSEEALRLFKELKFSA---DAITLTTVLKACAELEALKRGKQ 188
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I G E + +SL+ + K G++ +A + +++ + D S + ++ + G
Sbjct: 189 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCGR 248
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ E+RR+FD R + W+ MI+ Y + EA LF +M +++ ++ + V++A
Sbjct: 249 VNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRNETWE-DSRTLAAVINA 307
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L L +G +H H K G+ D+ +++ L+D+YSKCG + +F + D
Sbjct: 308 CIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT--- 364
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+ NSMI Y G++++AK +F+ + ++ +SW+++ +G+ ++ F++M
Sbjct: 365 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKL 424
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
++ + SSV+ A AS++SL G+ + + +G D + ++L D Y K G +E+
Sbjct: 425 DLPTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENG 484
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
RRVFD M +E+ W M+ G A +G+ E+I+LF++M I P ++T + VL AC++
Sbjct: 485 RRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYC 544
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV++G F +M+ + P+ H++C+VD+L+R+G + EA D + MPF+ D++ W+S
Sbjct: 545 GLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSS 604
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+L GC + + ++ + + +L E+ YV LS I+A++G W + VRKLM E +
Sbjct: 605 VLRGCVANGYKAMGKKVAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNV 664
Query: 686 RKSGGCSWVE 695
K+ G SW +
Sbjct: 665 SKNPGSSWAD 674
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 209/738 (28%), Positives = 370/738 (50%), Gaps = 116/738 (15%)
Query: 11 INPET-SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
+ P+T +F S I C LL +++H ++ G + Y+ L+ MY
Sbjct: 170 LQPDTYTFPSVINACAGLLD-------FEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRF 222
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMI---NANIQW-------------------------- 100
+A ++ +++ D+V N +I NAN W
Sbjct: 223 NDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVL 282
Query: 101 ------GNLEEAQRLFDGMPER-----NEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
G++EE + G+ E+ + + L+S + K + + F++ ++
Sbjct: 283 RACGGLGSVEEGD-IIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDA 341
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+SW ICG+ Q G E++KLF++++ KP+ +T +SI +AC + D G V
Sbjct: 342 VSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDY 400
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ +G+E C D + ++++++ + G+L +
Sbjct: 401 MITSGYE-----C--------------------------DTTASNILINMYAKCGNLLAS 429
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+ +F M ++ VSW+ MI Y Q+G +EA +LF+ M + KP++ + ++LS L
Sbjct: 430 QEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQL 488
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G +H + K+G ++ +SN L+D+Y+KC
Sbjct: 489 GDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC------------------------- 523
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
G+M ++ ++F+NM R+ ++W+ II+ + + +L + + M G P
Sbjct: 524 ---------GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTP 574
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ +T S+L + +A+ +GK++HG I KLG DV +G L + Y+K G + +S +VF
Sbjct: 575 DMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF 634
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
M K+ ++WT ++ G K+++ F EME I P+ + ++++FACSHSGLV+
Sbjct: 635 KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVE 694
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+GL YF+ M+ Y I+P HY CVVD+LSRS L +AEDFI SMP +PDS+ W +LLS
Sbjct: 695 EGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 754
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ + +IA+R + + +L + YVL+SN+YA+ G+W ++RK + +GL+K
Sbjct: 755 CRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDP 814
Query: 690 GCSWVEVRNQVHFFFQKT 707
GCSW+E++N+V+ F T
Sbjct: 815 GCSWMEIQNKVYVFGTGT 832
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 225/503 (44%), Gaps = 69/503 (13%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+P NV W + I NG EAL L+ + ++P+ TF S+ ACA + DF +
Sbjct: 134 SPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 193
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
S+ + GF + + N+LI + + ++D AR VF+ M RDVV
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVV------------ 241
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
SW+ +I+ YN +GY EA ++ + P++ S VL
Sbjct: 242 -------------------SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVL 282
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A L ++ G +H + KIGI+KDV ++N L+ +Y K DGR +FD +V +D
Sbjct: 283 RACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD-- 340
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSWN+MI GY G EE+ +LF M QF
Sbjct: 341 -AVSWNTMICGYSQVGLYEESIKLFMEMV-----------------NQFK---------- 372
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
P+ T +S+L A + LE GK +H +I G+ D L + YAK G++
Sbjct: 373 -----PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLL 427
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+S+ VF M K+ +SW M+ ++G E++ LF +M KT + P+ +T + +L +
Sbjct: 428 ASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMST 486
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
G + G + + + N +VDM ++ G + ++ +M D W
Sbjct: 487 QLGDLXLGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITW 544
Query: 624 ASLLSGCKTYKNEQIAERAVKNL 646
++++ C ++ + R + +
Sbjct: 545 NTIIASCVHSEDCNLGLRMISRM 567
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 161/374 (43%), Gaps = 44/374 (11%)
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+ R+ + +R + FS + ALAS +H+ ++ +G+ V S LI
Sbjct: 61 KTLRVLHECSRQTL------FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLI 114
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
Y+ + VF + +V WNS+I NG EA
Sbjct: 115 AKYAHFRDPTSSFSVFR--LASPSNNVYXWNSIIRALTHNGLFSEA-------------- 158
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
+S Y E ++ L P+ TF SV+ A A + E K +H +++
Sbjct: 159 ----LSLYSETQRIRLQ-------------PDTYTFPSVINACAGLLDFEMAKSIHDRVL 201
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+GF D+++G AL D Y + D++ +R+VF+ MP ++ +SW ++ G +GY E++
Sbjct: 202 XMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE 261
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
++ + P+ T+ SVL AC G V++G +E I IK + ++ M
Sbjct: 262 IYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI-GIKKDVIVNNGLLSMY 320
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
+ L + + M D+ +W +++ G Y + E ++K ++ + +
Sbjct: 321 CKFNGLIDGRRIFDKMVLR-DAVSWNTMICG---YSQVGLYEESIKLFMEMVNQFKPDLL 376
Query: 659 LLSNIYASAGRWID 672
+++I + G D
Sbjct: 377 TITSILQACGHLGD 390
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 347/644 (53%), Gaps = 36/644 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N I+ + + GNL+EA+ +F M R+ VSW A+IS + ++G++ ++ F+ P +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 151 SWTAAICGFVQNGFSF-EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
S+ A I ++N +A +LF + E N V+++++ F ++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
F V+ N L++ L+ G+ + A VF M ++VVS + ++ + +MG + +A
Sbjct: 170 T-PVKFRDSVA-SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALAS 328
R +FD M ERN ++W+ MI Y ++G+ E+ F LF +M + K N++ +++ A
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH---- 384
R G +H V ++ +E D+F+ N+L+ +YSK G + + VF + KD
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 385 ------------------------VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+VSW MI G+ G++ + ELF MP++++++W+
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWT 407
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+IS ++ + ++ F++ML PN TFSSVL A+AS+A L +G +HG+++K+
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D+ + +L Y K G+ + ++F + + N +S+ M+ G + +G+ K+++ LF
Sbjct: 468 NIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF 527
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+E + PN +T L++L AC H G VD G KYF SM+ YNI+P HY C+VD+L R
Sbjct: 528 SMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGR 587
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
SG L +A + I++MP +P S W SLLS KT+ +AE A K L +L + YV+L
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVL 647
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
S +Y+ G+ D + + K ++K G SW+ ++ +VH F
Sbjct: 648 SQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFL 691
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 207/417 (49%), Gaps = 70/417 (16%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL YL + K EA + + + ++V + M++ + G + +A+ LFD M ERN ++W
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-V 180
TA+I G+ K GF ++GF LFL++ + G V
Sbjct: 243 TAMIDGYFK--------------------------AGFFEDGFG-----LFLRMRQEGDV 271
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K N T + + KAC + +R G + GL+ + E + + NSL+++ K+G + A++
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 241 V-------------------------------FDRMEKRDVVSWTVILDVFIEMGDLGEA 269
V F++M +D+VSWT ++ F G++ +
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F MPE++ ++W+ MI+ + +GY EEA F +M + PN+ FS VLSA ASL
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G+ +H V+K+ I D+ + N+L+ +Y KCG T D +F I E + +VS+N
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN---IVSYN 508
Query: 390 SMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+MI GY NG ++A +LF + + N V++ A++S + DL + F M
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 210/435 (48%), Gaps = 33/435 (7%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
CNS I+ + G + A ++F +M R +VSW ++ + E G + +A ++FDEMP R
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 282 VSWSVMI-ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
S++ MI A +A+ LF + + N ++ +++ +R+G A
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGF-----VRAGRFDEA 163
Query: 341 HVLKIGIE---KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
L +D SN L+ Y + G+ + VF + K+ VVS +SM+ GY
Sbjct: 164 EFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE---VVSCSSMVHGYCK 220
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSS 456
G++ +A+ LFD M +RN ++W+A+I GY + F+ F +F M G++ N +T +
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+ A +G +HG + ++ +D+FLG +L Y+K G + ++ VF M +K+
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW ++ GL + E+ LFE+M + ++ ++ S G + K ++ F
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFG 396
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTY 633
M NI +T ++ +G EA + + M + P+S ++S+LS +
Sbjct: 397 MMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 634 KN----EQIAERAVK 644
+ QI R VK
Sbjct: 452 ADLIEGLQIHGRVVK 466
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 173/397 (43%), Gaps = 65/397 (16%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +HG + + + + +L L+ MY EA + + D V N +I +
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
Q + EA LF+ MP ++ VSWT +I GF G + + + F P ++ I+WTA I
Sbjct: 353 QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISA 412
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
FV NG+ EAL F K+L+ V PN TFSS+ A A + D GL + G + K
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+SV NSL+++ K G + +A +IF + E
Sbjct: 473 LSVQNSLVSMYCKCGNTN-------------------------------DAYKIFSCISE 501
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N VS++ MI+ Y+ +G+ ++A +LF + +PN F +LSA V
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC-----------V 550
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H + +G + Y K ++ +E H + M+ G +
Sbjct: 551 HVGYVDLGWK------------YFKSMKSSYN-------IEPGPDH---YACMVDLLGRS 588
Query: 399 GQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
G +++A L MP K + W +++S H + DL
Sbjct: 589 GLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME- 544
+F + +A++G+++ + +F +M +++ +SW M+ AE+G ++ +F+EM
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + + N + + C + K + F + + N Y ++ R+GR
Sbjct: 110 RVTTSYNAMITAMIKNKCD----LGKAYELFCDIP-----EKNAVSYATMITGFVRAGRF 160
Query: 605 SEAEDFINSMPFE-PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
EAE P + DS A LLSG Y AV+ +A + + +
Sbjct: 161 DEAEFLYAETPVKFRDSVASNVLLSG---YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHG 217
Query: 664 YASAGRWIDAMNVRKLMTEKGL 685
Y GR +DA ++ MTE+ +
Sbjct: 218 YCKMGRIVDARSLFDRMTERNV 239
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 72/197 (36%), Gaps = 64/197 (32%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR 70
+ E NSY T +L S +I+G +HG ++K I
Sbjct: 430 LQKEVCPNSY--TFSSVLSATASLADLIEGLQIHGRVVKMNIVN---------------- 471
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
DL V N +++ + GN +A ++F + E N VS+ +ISG
Sbjct: 472 ---------------DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG--- 513
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+ NGF +ALKLF L SG +PN VTF ++
Sbjct: 514 ----------------------------YSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Query: 191 CKACAEINDFRLGLSVF 207
AC + LG F
Sbjct: 546 LSACVHVGYVDLGWKYF 562
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 215/682 (31%), Positives = 338/682 (49%), Gaps = 82/682 (12%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L+++ S ++I G + +G +IMY+ + L++ L F
Sbjct: 220 LRNVVSWTIMISGYSQNGQ------------ENDAIIMYI---QMLQSGYFPDPLT-FGS 263
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
++ C I +I G + G + + ++ ALIS + + G++ + F +
Sbjct: 264 IIKACCIAGDIDLGRQLHGHVIKSGY-DHHLIAQNALISMYTRFGQIVHASDVFTMISTK 322
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFSSICKACAEINDFRLGLSV 206
++ISW + I GF Q G+ EAL LF + G +PNE F S+ AC + + G +
Sbjct: 323 DLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQI 382
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G+ K G L R+VF + + D++ + G L
Sbjct: 383 HGMCAKFG----------------------LGRNVF---------AGCSLCDMYAKFGFL 411
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A R F ++ + VSW+ +IA ++ SG EA F QM P+ F +L A
Sbjct: 412 PSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCAC 471
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
S + G +H++++KIG++K+ + N+L+ +Y+KC D VF + E
Sbjct: 472 GSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSEN------ 525
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
N VSW+AI+S L+HKQ VF +F ML S
Sbjct: 526 ---------------------------ANLVSWNAILSACLQHKQAGEVFRLFKLMLFSE 558
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P+ T +++L A +ASLE G +H +K G DV + L D YAK G ++ +R
Sbjct: 559 NKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHAR 618
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
VF + + +SW+ ++ G A+ G E++NLF M+ + PNE+T L VL ACSH G
Sbjct: 619 DVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIG 678
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LV++G ++N+ME I P H +C+VD+L+R+G L EAE+FI M F PD W +L
Sbjct: 679 LVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTL 738
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L+ CKT+ N IAERA +N+ KL + A VLLSNI+AS G W + +R LM + G++
Sbjct: 739 LASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQ 798
Query: 687 KSGGCSWVEVRNQVHFFFQKTD 708
K G SW+ V++Q+H FF + +
Sbjct: 799 KVPGQSWIAVKDQIHVFFSEDN 820
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 205/443 (46%), Gaps = 43/443 (9%)
Query: 200 FRLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR----DVVSWT 254
+R L F K + + S +LI + + + + D + K D+V
Sbjct: 137 YREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQN 196
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
IL+++ + G L +AR+ FD M RN VSW++MI+ Y+Q+G +A ++ QM + + P
Sbjct: 197 HILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFP 256
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ F ++ A + G +H HV+K G + + NALI +Y++ G+ VF
Sbjct: 257 DPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVF 316
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
I KD ++SW SMI G+ G EA LF +M ++ G+ +
Sbjct: 317 TMISTKD---LISWASMITGFTQLGYEIEALYLFRDMFRQ----------GFYQ------ 357
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
PN+ F SV A S+ E G+ +HG K G +VF G +L D
Sbjct: 358 --------------PNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCD 403
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G + S+ R F ++ + +SW ++ ++SG E+I F +M T + P+ +T
Sbjct: 404 MYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGIT 463
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC--VVDMLSRSGRLSEAEDFIN 612
LS+L AC +++G + + I I + C ++ M ++ L +A +
Sbjct: 464 FLSLLCACGSPVTINQGTQIHSY---IIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFK 520
Query: 613 SMPFEPDSNAWASLLSGCKTYKN 635
+ + +W ++LS C +K
Sbjct: 521 DVSENANLVSWNAILSACLQHKQ 543
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L LL S + QG +H ++IK G+ KE + LL MY +A + KD+
Sbjct: 463 TFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDV 522
Query: 83 N-GFDLVVHNCMINANIQWGNLEEAQRLFDGM------PER------------------- 116
+ +LV N +++A +Q E RLF M P+
Sbjct: 523 SENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVG 582
Query: 117 NEVSWTALISG--------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
N+V ++ SG + K G ++ + F +++SW++ I G+ Q
Sbjct: 583 NQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQF 642
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI-FKAGFEKHVSV 221
G EAL LF + GV+PNEVT+ + AC+ I G + + + G
Sbjct: 643 GLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREH 702
Query: 222 CNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARR 271
+ ++ L + G + A + +M D+ W +L G++ A R
Sbjct: 703 VSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAER 753
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 347/644 (53%), Gaps = 36/644 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N I+ + + GNL+EA+ +F M R+ VSW A+IS + ++G++ ++ F+ P +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 151 SWTAAICGFVQNGFSF-EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
S+ A I ++N +A +LF + E N V+++++ F ++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
F V+ N L++ L+ G+ + A VF M ++VVS + ++ + +MG + +A
Sbjct: 170 T-PVKFRDSVA-SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALAS 328
R +FD M ERN ++W+ MI Y ++G+ E+ F LF +M + K N++ +++ A
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH---- 384
R G +H V ++ +E D+F+ N+L+ +YSK G + + VF + KD
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 385 ------------------------VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+VSW MI G+ G++ + ELF MP++++++W+
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWT 407
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+IS ++ + ++ F++ML PN TFSSVL A+AS+A L +G +HG+++K+
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D+ + +L Y K G+ + ++F + + N +S+ M+ G + +G+ K+++ LF
Sbjct: 468 NIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF 527
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+E + PN +T L++L AC H G VD G KYF SM+ YNI+P HY C+VD+L R
Sbjct: 528 SMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGR 587
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
SG L +A + I++MP +P S W SLLS KT+ +AE A K L +L + YV+L
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVL 647
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
S +Y+ G+ D + + K ++K G SW+ ++ +VH F
Sbjct: 648 SQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFL 691
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 207/417 (49%), Gaps = 70/417 (16%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL YL + K EA + + + ++V + M++ + G + +A+ LFD M ERN ++W
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-V 180
TA+I G+ K GF ++GF LFL++ + G V
Sbjct: 243 TAMIDGYFK--------------------------AGFFEDGFG-----LFLRMRQEGDV 271
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K N T + + KAC + +R G + GL+ + E + + NSL+++ K+G + A++
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 241 V-------------------------------FDRMEKRDVVSWTVILDVFIEMGDLGEA 269
V F++M +D+VSWT ++ F G++ +
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F MPE++ ++W+ MI+ + +GY EEA F +M + PN+ FS VLSA ASL
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G+ +H V+K+ I D+ + N+L+ +Y KCG T D +F I E + +VS+N
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN---IVSYN 508
Query: 390 SMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+MI GY NG ++A +LF + + N V++ A++S + DL + F M
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 210/435 (48%), Gaps = 33/435 (7%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
CNS I+ + G + A ++F +M R +VSW ++ + E G + +A ++FDEMP R
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 282 VSWSVMI-ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
S++ MI A +A+ LF + + N ++ +++ +R+G A
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGF-----VRAGRFDEA 163
Query: 341 HVLKIGIE---KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
L +D SN L+ Y + G+ + VF + K+ VVS +SM+ GY
Sbjct: 164 EFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE---VVSCSSMVHGYCK 220
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSS 456
G++ +A+ LFD M +RN ++W+A+I GY + F+ F +F M G++ N +T +
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+ A +G +HG + ++ +D+FLG +L Y+K G + ++ VF M +K+
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW ++ GL + E+ LFE+M + ++ ++ S G + K ++ F
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFG 396
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTY 633
M NI +T ++ +G EA + + M + P+S ++S+LS +
Sbjct: 397 MMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 634 KN----EQIAERAVK 644
+ QI R VK
Sbjct: 452 ADLIEGLQIHGRVVK 466
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 173/397 (43%), Gaps = 65/397 (16%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +HG + + + + +L L+ MY EA + + D V N +I +
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
Q + EA LF+ MP ++ VSWT +I GF G + + + F P ++ I+WTA I
Sbjct: 353 QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISA 412
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
FV NG+ EAL F K+L+ V PN TFSS+ A A + D GL + G + K
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+SV NSL+++ K G + +A +IF + E
Sbjct: 473 LSVQNSLVSMYCKCGNTN-------------------------------DAYKIFSCISE 501
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N VS++ MI+ Y+ +G+ ++A +LF + +PN F +LSA V
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC-----------V 550
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H + +G + Y K ++ +E H + M+ G +
Sbjct: 551 HVGYVDLGWK------------YFKSMKSSYN-------IEPGPDH---YACMVDLLGRS 588
Query: 399 GQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
G +++A L MP K + W +++S H + DL
Sbjct: 589 GLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME- 544
+F + +A++G+++ + +F +M +++ +SW M+ AE+G ++ +F+EM
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + + N + + C + K + F + + N Y ++ R+GR
Sbjct: 110 RVTTSYNAMITAMIKNKCD----LGKAYELFCDIP-----EKNAVSYATMITGFVRAGRF 160
Query: 605 SEAEDFINSMPFE-PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
EAE P + DS A LLSG Y AV+ +A + + +
Sbjct: 161 DEAEFLYAETPVKFRDSVASNVLLSG---YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHG 217
Query: 664 YASAGRWIDAMNVRKLMTEKGL 685
Y GR +DA ++ MTE+ +
Sbjct: 218 YCKMGRIVDARSLFDRMTERNV 239
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 72/197 (36%), Gaps = 64/197 (32%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR 70
+ E NSY T +L S +I+G +HG ++K I
Sbjct: 430 LQKEVCPNSY--TFSSVLSATASLADLIEGLQIHGRVVKMNIVN---------------- 471
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
DL V N +++ + GN +A ++F + E N VS+ +ISG
Sbjct: 472 ---------------DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG--- 513
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+ NGF +ALKLF L SG +PN VTF ++
Sbjct: 514 ----------------------------YSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Query: 191 CKACAEINDFRLGLSVF 207
AC + LG F
Sbjct: 546 LSACVHVGYVDLGWKYF 562
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 178/581 (30%), Positives = 313/581 (53%), Gaps = 67/581 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
L+S + K R+ E+ F + ++ ++W ICG+ Q G ++KLF+ +++ G P
Sbjct: 262 GLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVP 320
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ ++ +S +AC + D ++G V + +GFE CN
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACN------------------- 361
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+++D++ + GDL A+ +FD ++ V+W+ +I Y QSGY +E
Sbjct: 362 ------------ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE 409
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F+ M + KP++ F ++LS + L + G +H V+K G E ++ I N+L+D+Y+
Sbjct: 410 SFKMM-KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYA 468
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC G+M++ ++F M + +SW+ +
Sbjct: 469 KC----------------------------------GEMDDLLKVFSYMSAHDIISWNTV 494
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I+ + + F + NEM G +P+++T +L + +A +GK++HG I K GF
Sbjct: 495 IASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGF 554
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+V +G AL + Y+K G +E+ +VF M +K+ ++WT ++ G K+++ F++
Sbjct: 555 ESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
ME + + P+ + ++ +FACSHSG+V +GL++F+ M+ YN++P HY CVVD+L+RSG
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L++AE+FI SMP +PD++ W +LLS C+ N IA+R K + +L + YVL+SN
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSN 734
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
IYA+ G+W VR M KGL+K G SW+E++ +V+ F
Sbjct: 735 IYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVF 775
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 152/614 (24%), Positives = 260/614 (42%), Gaps = 87/614 (14%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
L LG + ++ D F V+++C +++ G + + G E +
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGF-ESDLYIG 159
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
ALI + + ++ + + FE ++ +SW + I G+ NGF +AL ++ K +G+
Sbjct: 160 NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMV 219
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T SS+ AC + + G++V G+I K G V + N L+++ K + AR V
Sbjct: 220 PDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F +M +D V+W + MI Y Q G E +
Sbjct: 280 FSKMAVKDSVTW-------------------------------NTMICGYAQLGRHEASV 308
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+LF M F P+ + + A L+ G VH +++ G E D N LID+Y
Sbjct: 309 KLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMY 367
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG+ + VFD+ KD V+WNS+I GY +G +E E F M
Sbjct: 368 AKCGDLLAAQEVFDTTKCKD---SVTWNSLINGYTQSGYYKEGLESFKMMK--------- 415
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+E K P+ TF +L + +A + +G+ +H +IK G
Sbjct: 416 -----MERK------------------PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFG 452
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F ++ +G +L D YAK G+++ +VF M + ISW ++ +
Sbjct: 453 FEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMIN 512
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKY--------FNSMEPIYNIKPNGRHYTC 593
EM + P+E T+L +L CS + +G + F S PI N
Sbjct: 513 EMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGN---------A 563
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+++M S+ G L M E D W +L+S Y + A +A +++ +L+
Sbjct: 564 LIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGEGKKALKAFQDM-ELSGVL 621
Query: 654 PAGYVLLSNIYASA 667
P ++ I+A +
Sbjct: 622 PDSVAFIAFIFACS 635
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 193/428 (45%), Gaps = 67/428 (15%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+P NV W + I NG +AL + ++ E ++P+ TF S+ +CA I D LG
Sbjct: 81 SPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG 140
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V + GFE + + N+LI + + ++D AR VF+ M RD
Sbjct: 141 CIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD-------------- 186
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
VSW+ +I+ Y +G+ E+A ++ + P+ S VL
Sbjct: 187 -----------------SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVL 229
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A SL A++ G+ VH + KIGI DV I N L+ +Y K ++ R VF + KD
Sbjct: 230 LACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD-- 287
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V+WN+MI GY G+ E + +LF +M
Sbjct: 288 -SVTWNTMICGYAQLGRHEASVKLFMDM-------------------------------- 314
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+ G +P+ + +S + A L+ GK +H +I GF D L D YAK GD+
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLL 374
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+++ VFD K+ ++W ++ G +SGY KE + F +M K P+ +T + +L S
Sbjct: 375 AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFS 433
Query: 564 HSGLVDKG 571
+++G
Sbjct: 434 QLADINQG 441
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 173/353 (49%), Gaps = 37/353 (10%)
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
P N W+ +I +G +A + +M +P+ F V+++ A + L G
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC 141
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VH H +++G E D++I NALID+YS R V
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYS--------RFV----------------------- 170
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
++ A+ +F+ M R+ VSW+++ISGY + ++ ++++ ++G +P+ T SS
Sbjct: 171 ---DLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSS 227
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL A S+ ++++G +HG I K+G DV +G L Y K + +RRVF +M K+
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
++W M+ G A+ G + S+ LF +M P+ L+I S + AC SG + G K+ +
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVG-KFVH 345
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + ++DM ++ G L A++ ++ + DS W SL++G
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK-DSVTWNSLING 397
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 176/413 (42%), Gaps = 73/413 (17%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V +G A+HG + K GI + + LL MY + EA + + D V N MI
Sbjct: 238 VKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG 297
Query: 97 NIQWGNLEEAQRLF----DG-MP---------------------------------ERNE 118
Q G E + +LF DG +P E +
Sbjct: 298 YAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDT 357
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V+ LI + K G + + F+ ++ ++W + I G+ Q+G+ E L+ F K+++
Sbjct: 358 VACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKM 416
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
KP+ VTF + +++ D G + + K GFE + + NSL+ + K GE+D
Sbjct: 417 ERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDL 476
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VF M D++SW ++ + D
Sbjct: 477 LKVFSYMSAHDIISWNTVIASSVHFDDC-------------------------------T 505
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
F++ +M P+ + +L + L R G +H ++ K G E +V I NALI
Sbjct: 506 VGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALI 565
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
++YSKCG ++ VF + EKD VV+W ++I +G+ G+ ++A + F +M
Sbjct: 566 EMYSKCGSLENCIKVFKYMKEKD---VVTWTALISAFGMYGEGKKALKAFQDM 615
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 171/408 (41%), Gaps = 87/408 (21%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF---- 141
D V N +I+ + G+L AQ +FD ++ V+W +LI+G+ + G +E + F
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMK 415
Query: 142 -ERNP-------FQNVISWTAAI-------CGFVQNGFSFE------------------- 167
ER P ++ S A I C ++ GF E
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475
Query: 168 ALKLFL-----------KLLESGVKPNEVTFS--------------------SICKACAE 196
LK+F ++ S V ++ T I C+
Sbjct: 476 LLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL 535
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ R G + G IFK+GFE +V + N+LI + K G ++ VF M+++DVV+WT +
Sbjct: 536 LAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTAL 595
Query: 257 LDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYS 311
+ F G+ +A + F +M + V++ I + SG +E R F +M T Y+
Sbjct: 596 ISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYN 655
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCGETKD 369
+P ++ V+ LA RSG+ A +L + ++ D + AL+ G T
Sbjct: 656 LEPRMEHYACVVDLLA-----RSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNI 710
Query: 370 GRLVFDSIVE---KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+ V I+E D + V +++ Y G+ ++ K + ++M +
Sbjct: 711 AQRVSKKILELNSDDTGYYVLVSNI---YATLGKWDQVKTVRNSMKTK 755
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 104/251 (41%), Gaps = 46/251 (18%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ +HG++ K+G E+N + + N +I
Sbjct: 541 QGKEIHGYIFKSG---------------------FESN----------VPIGNALIEMYS 569
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ G+LE ++F M E++ V+WTALIS F +G ++++ F+ V+ + A
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 159 FV----QNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFG--LIF 211
F+ +G E L+ F ++ + ++P ++ + A R GL I
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLA-----RSGLLAQAEEFIL 684
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR---MEKRDVVSWTVILDVFIEMGDLGE 268
+ S+ +L++ G ++A+ V + + D + ++ +++ +G +
Sbjct: 685 SMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQ 744
Query: 269 ARRIFDEMPER 279
+ + + M +
Sbjct: 745 VKTVRNSMKTK 755
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 347/644 (53%), Gaps = 36/644 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N I+ + + GNL+EA+ +F M R+ VSW A+IS + ++G++ ++ F+ P +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 151 SWTAAICGFVQNGFSF-EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
S+ A I ++N +A +LF + E N V+++++ F ++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
F V+ N L++ L+ G+ + A VF M ++VVS + ++ + +MG + +A
Sbjct: 170 T-PVKFRDSVA-SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALAS 328
R +FD M ERN ++W+ MI Y ++G+ E+ F LF +M + K N++ +++ A
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH---- 384
R G +H V ++ +E D+F+ N+L+ +YSK G + + VF + KD
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 385 ------------------------VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+VSW MI G+ G++ + ELF MP++++++W+
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWT 407
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+IS ++ + ++ F++ML PN TFSSVL A+AS+A L +G +HG+++K+
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D+ + +L Y K G+ + ++F + + N +S+ M+ G + +G+ K+++ LF
Sbjct: 468 NIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF 527
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+E + PN +T L++L AC H G VD G KYF SM+ YNI+P HY C+VD+L R
Sbjct: 528 SMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGR 587
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
SG L +A + I++MP +P S W SLLS KT+ +AE A K L +L + YV+L
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVL 647
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
S +Y+ G+ D + + K ++K G SW+ ++ +VH F
Sbjct: 648 SQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFL 691
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 207/417 (49%), Gaps = 70/417 (16%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL YL + K EA + + + ++V + M++ + G + +A+ LFD M ERN ++W
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-V 180
TA+I G+ K GF ++GF LFL++ + G V
Sbjct: 243 TAMIDGYFK--------------------------AGFFEDGFG-----LFLRMRQEGDV 271
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K N T + + KAC + +R G + GL+ + E + + NSL+++ K+G + A++
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 241 V-------------------------------FDRMEKRDVVSWTVILDVFIEMGDLGEA 269
V F++M +D+VSWT ++ F G++ +
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F MPE++ ++W+ MI+ + +GY EEA F +M + PN+ FS VLSA ASL
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G+ +H V+K+ I D+ + N+L+ +Y KCG T D +F I E + +VS+N
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN---IVSYN 508
Query: 390 SMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+MI GY NG ++A +LF + + N V++ A++S + DL + F M
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 210/435 (48%), Gaps = 33/435 (7%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
CNS I+ + G + A ++F +M R +VSW ++ + E G + +A ++FDEMP R
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 282 VSWSVMI-ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
S++ MI A +A+ LF + + N ++ +++ +R+G A
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGF-----VRAGRFDEA 163
Query: 341 HVLKIGIE---KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
L +D SN L+ Y + G+ + VF + K+ VVS +SM+ GY
Sbjct: 164 EFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE---VVSCSSMVHGYCK 220
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSS 456
G++ +A+ LFD M +RN ++W+A+I GY + F+ F +F M G++ N +T +
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+ A +G +HG + ++ +D+FLG +L Y+K G + ++ VF M +K+
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW ++ GL + E+ LFE+M + ++ ++ S G + K ++ F
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFG 396
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTY 633
M NI +T ++ +G EA + + M + P+S ++S+LS +
Sbjct: 397 MMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 634 KN----EQIAERAVK 644
+ QI R VK
Sbjct: 452 ADLIEGLQIHGRVVK 466
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 173/397 (43%), Gaps = 65/397 (16%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +HG + + + + +L L+ MY EA + + D V N +I +
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
Q + EA LF+ MP ++ VSWT +I GF G + + + F P ++ I+WTA I
Sbjct: 353 QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISA 412
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
FV NG+ EAL F K+L+ V PN TFSS+ A A + D GL + G + K
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+SV NSL+++ K G + +A +IF + E
Sbjct: 473 LSVQNSLVSMYCKCGNTN-------------------------------DAYKIFSCISE 501
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N VS++ MI+ Y+ +G+ ++A +LF + +PN F +LSA V
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC-----------V 550
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H + +G + Y K ++ +E H + M+ G +
Sbjct: 551 HVGYVDLGWK------------YFKSMKSSYN-------IEPGPDH---YACMVDLLGRS 588
Query: 399 GQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
G +++A L MP K + W +++S H + DL
Sbjct: 589 GLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME- 544
+F + +A++G+++ + +F +M +++ +SW M+ AE+G ++ +F+EM
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + + N + + C + K + F + + N Y ++ R+GR
Sbjct: 110 RVTTSYNAMITAMIKNKCD----LGKAYELFCDIP-----EKNAVSYATMITGFVRAGRF 160
Query: 605 SEAEDFINSMPFE-PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
EAE P + DS A LLSG Y AV+ +A + + +
Sbjct: 161 DEAEFLYAETPVKFRDSVASNVLLSG---YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHG 217
Query: 664 YASAGRWIDAMNVRKLMTEKGL 685
Y GR +DA ++ MTE+ +
Sbjct: 218 YCKMGRIVDARSLFDRMTERNV 239
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 72/197 (36%), Gaps = 64/197 (32%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR 70
+ E NSY T +L S +I+G +HG ++K I
Sbjct: 430 LQKEVCPNSY--TFSSVLSATASLADLIEGLQIHGRVVKMNIVN---------------- 471
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
DL V N +++ + GN +A ++F + E N VS+ +ISG
Sbjct: 472 ---------------DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG--- 513
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+ NGF +ALKLF L SG +PN VTF ++
Sbjct: 514 ----------------------------YSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Query: 191 CKACAEINDFRLGLSVF 207
AC + LG F
Sbjct: 546 LSACVHVGYVDLGWKYF 562
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 220/654 (33%), Positives = 330/654 (50%), Gaps = 84/654 (12%)
Query: 83 NGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NGF+ + + N ++ + G+LEEA +FD + +R
Sbjct: 146 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG----------------------- 182
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKP-NE----VTFSSICKAC 194
+VISW + + V++ ++ AL LF K+ L KP NE ++ +I AC
Sbjct: 183 -----IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC 237
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ V G + G V V N+LI K G ++ A VF+ ME +DVVSW
Sbjct: 238 GSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 297
Query: 255 VILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
++ + + G+ A +F M + N V+W+ +IA Y+Q G EA +FRQM
Sbjct: 298 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 357
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI----------GIEKDVFISNALIDL 360
PN VLSA ASL A GM +HA+ LK G ++D+ + NALID+
Sbjct: 358 GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 417
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKC K R +FD I ++ +VV+W MIGG+ G +A +LF M
Sbjct: 418 YSKCRSFKAARSIFDDIPLEE-RNVVTWTVMIGGHAQYGDSNDALKLFVEM--------- 467
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
I Y G PN T S +L A A +A++ GK +H +++
Sbjct: 468 -ISEPY-------------------GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR- 506
Query: 481 GFPYD---VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
YD F+ L + Y+K GD++++R VFD M K+ ISWT M+ G G E++
Sbjct: 507 HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 566
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
++F++M K P+++T L VL+ACSH G+VD+GL YF+SM Y + P HY +D+
Sbjct: 567 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL 626
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+R GRL +A + MP EP + W +LLS C+ + N ++AE A+ L ++ E+ Y
Sbjct: 627 LARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 686
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
L+SNIYA+AGRW D +R LM + G++K GCSWV+ + FF +P
Sbjct: 687 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 740
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 157/537 (29%), Positives = 268/537 (49%), Gaps = 65/537 (12%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T +++ ++ G + ++ ER + W I ++ G A+ + ++L +G +
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ T + KAC E+ +R G + GLI GFE +V +CN+L+ + + G ++ A +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 242 FDRMEKR---DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
FD + +R DV+SW I+ ++ + +W+
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSN-----------------AWT------------- 204
Query: 299 EAFRLFRQMTRYSF-KPN---TSCFSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVF 352
A LF +MT KP + SIV L A SLKA+ VH + ++ G DVF
Sbjct: 205 -ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVF 263
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
+ NALID Y+KCG ++ VF+ + KD VVSWN+M+ GY +G + A ELF NM
Sbjct: 264 VGNALIDAYAKCGLMENAVKVFNMMEFKD---VVSWNAMVAGYSQSGNFKAAFELFKNMR 320
Query: 413 KRND----VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
K N V+W+A+I+GY + VF +M+ SG +PN T SVL A AS+ +
Sbjct: 321 KENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFS 380
Query: 469 KGKDLHGKIIK----------LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKN 516
+G ++H +K G D+ + AL D Y+K +++R +FD +P ++N
Sbjct: 381 QGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 440
Query: 517 EISWTVMVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++WTVM+ G A+ G + +++ LF EM E + PN TI +L AC+H + G K
Sbjct: 441 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG-KQ 499
Query: 575 FNSMEPIYNIKPNGRHYT--CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ ++ + ++ C+++M S+ G + A +SM + + +W S+++G
Sbjct: 500 IHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTG 555
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 244/521 (46%), Gaps = 71/521 (13%)
Query: 63 LIMYLGSRKSLEANEIVKDLNG--------FDLVVHNCMINANIQWGNLEEAQRLFDGMP 114
++ L + SL+A K+++G D+ V N +I+A + G +E A ++F+ M
Sbjct: 230 IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 289
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV----ISWTAAICGFVQNGFSFEALK 170
++ VSW A+++G+ + G + + F+ +N+ ++WTA I G+ Q G S EAL
Sbjct: 290 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 349
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK----------AGFEKHVS 220
+F +++ SG PN VT S+ ACA + F G+ + K G ++ +
Sbjct: 350 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 409
Query: 221 VCNSLITLSLKMGEVDLARSVFDR--MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V N+LI + K ARS+FD +E+R+VV+WTV++ + GD +A ++F EM
Sbjct: 410 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 469
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
Y PN S +L A A L A+R G +
Sbjct: 470 E-----------------------------PYGVAPNAYTISCILMACAHLAAIRIGKQI 500
Query: 339 HAHVLKIGI--EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
HA+VL+ F++N LI++YSKCG+ R VFDS+ +K +SW SM+ GYG
Sbjct: 501 HAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKS---AISWTSMMTGYG 557
Query: 397 LNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNK 451
++G+ EA ++FD M K +D+++ ++ D + F+ M G P
Sbjct: 558 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 617
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
++ + A L+K K +K + + AL ++E + +
Sbjct: 618 EHYAYAIDLLARFGRLDKA----WKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALN 673
Query: 511 R---MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+ M +N+ S+T++ A +G K+ + M+K+ I
Sbjct: 674 KLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 714
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 338/628 (53%), Gaps = 35/628 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V +++ ++ G ++ A RLF + ++++G+ K ++ ++ YFE
Sbjct: 172 DPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 231
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW I Q+G EAL L +++ GV+ + T++S ACA + F LG
Sbjct: 232 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL--FSLGW- 288
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
G + H V SL + D + +++++ + G
Sbjct: 289 --------GKQLHAKVIRSLPQI--------------------DPYVASALIELYAKCGS 320
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EA+R+F+ + +RN VSW+V+I Q ++ LF QM + + ++S
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L G +H+ LK G + + +SN+LI LY+KCG+ ++ VF S+ E+D+
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI--- 437
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW SMI Y G + +A+E FD M RN ++W+A++ Y++H + +++ ML
Sbjct: 438 VSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497
Query: 446 GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
++ P+ T+ ++ A + + + G + G +K G +V + A Y+K G I
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
++++FD + K+ +SW M+ G ++ G K++ F++M P+ ++ ++VL CSH
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +G YF+ M ++ I P H++C+VD+L R+G L+EA+D I+ MP +P + W
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 677
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CK + N+++AE A K++++L Y+LL+ IY+ AG+ D+ VRKLM +KG
Sbjct: 678 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 737
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K+ G SW+EV N+VH F +P+
Sbjct: 738 IKKNPGYSWMEVENKVHVFKADDVSHPQ 765
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 157/632 (24%), Positives = 296/632 (46%), Gaps = 62/632 (9%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L+ S+ + RALHG L+ G+ +L LL YL
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYL-------------------- 50
Query: 88 VVHNCMINANIQWGNLEEAQRLFDG-MPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+C G L +A+RL + E N ++ +++G+ K G + ++ F+R P
Sbjct: 51 ---SC--------GALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPR 99
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLS 205
++V SW + G+ Q + L+ F+ + SG PN TF + K+C + L
Sbjct: 100 RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQ 159
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ GL +K F V +L+ + ++ G VD A +F ++E+ + +L + ++
Sbjct: 160 LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYG 219
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ A F++M ER+ VSW++MIA +QSG EA L +M R + +++ ++ L+A
Sbjct: 220 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 279
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L +L G +HA V++ + D ++++ALI+LY+KCG K+ + VF+S+ +++
Sbjct: 280 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN---S 336
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNE 441
VSW +IGG ++ ELF+ M + + + +ISG L + +
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
L SG +S++ A L+ + + + + D+ T++ Y++ G+
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE----RDIVSWTSMITAYSQIGN 452
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLF 560
I +R FD M +N I+W M+ + G ++ + ++ M + +TP+ +T +++
Sbjct: 453 IIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 512
Query: 561 ACSHSG---LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DFINSM 614
C+ G L D+ + + I N+ + M S+ GR+SEA+ D +N
Sbjct: 513 GCADIGANKLGDQIIGHTVKAGLILNVSVA----NAAITMYSKCGRISEAQKLFDLLNG- 567
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
D +W ++++G Y + ++A K
Sbjct: 568 ---KDVVSWNAMITG---YSQHGMGKQAAKTF 593
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 164/352 (46%), Gaps = 38/352 (10%)
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
T + L + S AL +H ++ +G+ VF+ N L+ Y CG D R +
Sbjct: 4 TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLR 63
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ +++ +V++ N M+ GY G + +A+ELFD MP+R+ SW+ ++SGY + ++F
Sbjct: 64 ADIKE--PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDG 121
Query: 436 FAVFNEMLLSGE-IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F M SG+ +PN TF V+ + ++ E L G K F D + TAL D
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD 181
Query: 495 TYAKSGDIESSRRVFDR-------------------------------MPDKNEISWTVM 523
+ + G ++ + R+F + M +++ +SW +M
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMM 241
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEPIY 582
+ L++SG +E++ L EM + + + T S L AC+ + G + + + +
Sbjct: 242 IAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP 301
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
I P + ++++ ++ G EA+ NS+ + +S +W L+ G Y+
Sbjct: 302 QIDPYVA--SALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQYE 350
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 37/294 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH +K+G ++ ++ L+ +Y A + ++ D+V MI A Q
Sbjct: 390 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ 449
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+ +A+ FDGM RN ++W A++ +++HG E
Sbjct: 450 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEE------------------------ 485
Query: 160 VQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+ LK++ +L + V P+ VT+ ++ + CA+I +LG + G KAG +
Sbjct: 486 -------DGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILN 538
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
VSV N+ IT+ K G + A+ +FD + +DVVSW ++ + + G +A + FD+M
Sbjct: 539 VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLS 598
Query: 279 R----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
+ + +S+ +++ + SG +E F MTR + P FS ++ L
Sbjct: 599 KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLG 652
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 196/531 (36%), Positives = 305/531 (57%), Gaps = 46/531 (8%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGE 268
+F E+ V +L++ + G + ARS+FDR + +R+VV+WT +L + G + E
Sbjct: 62 LFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGLVDE 121
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A +F MP+RN VSW+ M+ Y +G +A LF +M + ++I+L+ L
Sbjct: 122 AEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMP----VRDAGSWNILLAML-- 175
Query: 329 LKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+RSG A L + E+DV ++D ++ G + RL+FDS+ E++V VS
Sbjct: 176 ---VRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNV---VS 229
Query: 388 WNSMIGGYGLNGQMEEA-------------------------------KELFDNMPKRND 416
WN+MI GY N +++EA ++LFD MP+RN
Sbjct: 230 WNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNV 289
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
V+W+ +++GYL+ KQ +L +F ML+SG PN+ TF L A + +A+L +GK +H
Sbjct: 290 VTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQM 349
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
I K F D F+G+AL + YAK G++ +R++FD +K+ ISW ++ A G E+
Sbjct: 350 ICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEA 409
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
I+L+E+M+ PN++T + +L ACSHSGLVD+GLK F SM +I HYTC++D
Sbjct: 410 IHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLID 469
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNA-WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
+ SR+GRL +A+ I+ + +P S + W++LL GC + NE I A +NL + ++
Sbjct: 470 LCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAG 529
Query: 656 GYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
Y LLSNIYASAG+W +A +R M +GL+K GCSW+EV N+VH F +
Sbjct: 530 TYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVAR 580
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 226/466 (48%), Gaps = 21/466 (4%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++V +++ + G ++EA+ LF MP+RN VSW ++ + GR ++ F+R P
Sbjct: 102 NVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMP 161
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++ SW + V++G +A +LF ++ E V + ++ +++ R
Sbjct: 162 VRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARS-GNVDEAR---- 216
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
L+F + E++V N++I+ + +D A +F +M RD+ S +++ FI+ D
Sbjct: 217 ---LLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKD 273
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L AR++FDEMPERN V+W+ M+ Y + E + LFR M +PN F L A
Sbjct: 274 LKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDA 333
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L L G VH + K + D F+ +AL+++Y+KCGE R +FD EKD +
Sbjct: 334 CSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKD---L 390
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+SWN +I Y +G EA L++ M + NDV++ ++S D +F
Sbjct: 391 ISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFES 450
Query: 442 MLLSGEIPNKSTFSSVLCASASVAS-LEKGKDL-HGKIIKL--GFPYDVFLGTALTDTYA 497
M+ I + + L S A L+ K L H IK G + LG
Sbjct: 451 MVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNE 510
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
G++ ++R + PD N ++T++ A +G KE+ + EM
Sbjct: 511 SIGNL-AARNLIQAEPD-NAGTYTLLSNIYASAGKWKEAAEIRSEM 554
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 176/388 (45%), Gaps = 73/388 (18%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL M + S +A E+ + D++ M++ + GN++EA+ LFD MPERN VSW
Sbjct: 171 LLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSW 230
Query: 122 TALISGFMKHGRVEESMWYFERNPF-------------------------------QNVI 150
A+ISG+ ++ R++E++ F + P +NV+
Sbjct: 231 NAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVV 290
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+WT + G+++ S +L LF +L SG++PN+VTF AC+++ G V +I
Sbjct: 291 TWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMI 350
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K F+ V ++L+ + K GEV LAR +FD ++D++SW I
Sbjct: 351 CKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGI-------------- 396
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
IA Y G EA L+ +M ++PN + ++LSA +
Sbjct: 397 -----------------IAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSG 439
Query: 331 ALRSGMHVHAHVLK---IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+ G+ + ++ I + + + LIDL S+ G D + + + K + V
Sbjct: 440 LVDEGLKIFESMVNDRSIAVRDEHY--TCLIDLCSRAGRLDDAKRLIHYLKIKPASGSV- 496
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRN 415
W++++GG +G E N+ RN
Sbjct: 497 WSALLGGCNAHGN-----ESIGNLAARN 519
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 200/638 (31%), Positives = 330/638 (51%), Gaps = 94/638 (14%)
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ +S+ F F ++W + I + +G ++L F+ +L SG+ P+ F S+ KA
Sbjct: 58 LHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKA 117
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM------GEVDL-ARSVFDRME 246
CA + D LG S+ G I + G + + N+L+ + K+ G L A V D M
Sbjct: 118 CAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMT 177
Query: 247 KR--DVVSWTVI----------LDVF----------------------------IEMGDL 266
+R V + +V+ ++ F +E +L
Sbjct: 178 ERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNL 237
Query: 267 GE-------------ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
G+ R+IF+ MPE++ VSW+ +IA ++G E + R+M + K
Sbjct: 238 GQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLK 297
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P++ S VL +A + G +H ++ G++ +V+++++LID+Y+KC D V
Sbjct: 298 PDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRV 357
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F + E R+ +SW++II+G +++ FD
Sbjct: 358 FTLLTE----------------------------------RDGISWNSIIAGCVQNGLFD 383
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F +ML++ P +FSS++ A A + +L GK LHG I + GF ++F+ ++L
Sbjct: 384 EGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLV 443
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK G+I ++R++FDRM ++ +SWT M+ G A G+A ++I LFE+M+ I PN +
Sbjct: 444 DMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYV 503
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
++VL ACSH+GLVD+ KYFNSM + I P HY V D+L R+GRL EA DFI
Sbjct: 504 AFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICG 563
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP P + WA+LLS C+ +KN +AE+ + ++ ++ Y+LL+NIY++A RW +A
Sbjct: 564 MPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEA 623
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R + G+RK+ CSW+EVRN+V+ F + +P
Sbjct: 624 AKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHP 661
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 189/430 (43%), Gaps = 61/430 (14%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
++ + L ++ R+F+ + ++W +I Y G P ++ F M P+ +
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG-ETKDGR------ 371
F VL A A L L G +H +++++G++ D++ NAL+++YSK K GR
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYG----------------------------------- 396
V D + E+ + V + + ++G G
Sbjct: 171 QVLDEMTERTRS-VRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEY 229
Query: 397 -------LNGQMEE---------AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
L Q+++ +++F+ MP+++ VSW+ II+G + + +
Sbjct: 230 REMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVR 289
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM + P+ T SSVL A + KGK++HG I+ G +V++ ++L D YAK
Sbjct: 290 EMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCT 349
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+ S RVF + +++ ISW ++ G ++G E + F +M I P + S++
Sbjct: 350 RVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMP 409
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
AC+H + G K + N + +VDM ++ G + A + M D
Sbjct: 410 ACAHLTTLHLG-KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DM 467
Query: 621 NAWASLLSGC 630
+W +++ GC
Sbjct: 468 VSWTAMIMGC 477
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 148/324 (45%), Gaps = 36/324 (11%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
S+R +F + PE KD+ S N +I G A + G++ E R
Sbjct: 252 SVRKIFEMMPE--------------KDLVSWNTIIAGNA------RNGLYGETLTMVR-- 289
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
+ + D V+ N +I G + G+ V+ ++
Sbjct: 290 --------EMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVA-SS 340
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K RV +S F ++ ISW + I G VQNG E LK F ++L + +KP
Sbjct: 341 LIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPK 400
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+FSSI ACA + LG + G I + GF++++ + +SL+ + K G + AR +FD
Sbjct: 401 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFD 460
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEE 299
RM RD+VSWT ++ G +A +F++M E N V++ ++ + +G +E
Sbjct: 461 RMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDE 520
Query: 300 AFRLFRQMT-RYSFKPNTSCFSIV 322
A++ F MT + P ++ V
Sbjct: 521 AWKYFNSMTLDFGIAPGVEHYAAV 544
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 220/654 (33%), Positives = 330/654 (50%), Gaps = 84/654 (12%)
Query: 83 NGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NGF+ + + N ++ + G+LEEA +FD + +R
Sbjct: 39 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG----------------------- 75
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKP-NE----VTFSSICKAC 194
+VISW + + V++ ++ AL LF K+ L KP NE ++ +I AC
Sbjct: 76 -----IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC 130
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ V G + G V V N+LI K G ++ A VF+ ME +DVVSW
Sbjct: 131 GSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 190
Query: 255 VILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
++ + + G+ A +F M + N V+W+ +IA Y+Q G EA +FRQM
Sbjct: 191 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 250
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI----------GIEKDVFISNALIDL 360
PN VLSA ASL A GM +HA+ LK G ++D+ + NALID+
Sbjct: 251 GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 310
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKC K R +FD I ++ +VV+W MIGG+ G +A +LF M
Sbjct: 311 YSKCRSFKAARSIFDDIPLEE-RNVVTWTVMIGGHAQYGDSNDALKLFVEM--------- 360
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
I Y G PN T S +L A A +A++ GK +H +++
Sbjct: 361 -ISEPY-------------------GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR- 399
Query: 481 GFPYD---VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
YD F+ L + Y+K GD++++R VFD M K+ ISWT M+ G G E++
Sbjct: 400 HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 459
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
++F++M K P+++T L VL+ACSH G+VD+GL YF+SM Y + P HY +D+
Sbjct: 460 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDL 519
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+R GRL +A + MP EP + W +LLS C+ + N ++AE A+ L ++ E+ Y
Sbjct: 520 LARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSY 579
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
L+SNIYA+AGRW D +R LM + G++K GCSWV+ + FF +P
Sbjct: 580 TLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 633
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 246/484 (50%), Gaps = 65/484 (13%)
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+L +G + + T + KAC E+ +R G + GLI GFE +V +CN+L+ + + G
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 235 VDLARSVFDRMEKR---DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
++ A +FD + +R DV+SW I+ ++ + +W+
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSN-----------------AWT------ 97
Query: 292 NQSGYPEEAFRLFRQMTRYSF-KPN---TSCFSIV--LSALASLKALRSGMHVHAHVLKI 345
A LF +MT KP + SIV L A SLKA+ VH + ++
Sbjct: 98 --------ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN 149
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G DVF+ NALID Y+KCG ++ VF+ + KD VVSWN+M+ GY +G + A
Sbjct: 150 GTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD---VVSWNAMVAGYSQSGNFKAAF 206
Query: 406 ELFDNMPKRND----VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
ELF NM K N V+W+A+I+GY + VF +M+ SG +PN T SVL A
Sbjct: 207 ELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSAC 266
Query: 462 ASVASLEKGKDLHGKIIK----------LGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
AS+ + +G ++H +K G D+ + AL D Y+K +++R +FD
Sbjct: 267 ASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDD 326
Query: 512 MP--DKNEISWTVMVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGL 567
+P ++N ++WTVM+ G A+ G + +++ LF EM E + PN TI +L AC+H
Sbjct: 327 IPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAA 386
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYT--CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
+ G K ++ ++ + ++ C+++M S+ G + A +SM + + +W S
Sbjct: 387 IRIG-KQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTS 444
Query: 626 LLSG 629
+++G
Sbjct: 445 MMTG 448
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 244/521 (46%), Gaps = 71/521 (13%)
Query: 63 LIMYLGSRKSLEANEIVKDLNG--------FDLVVHNCMINANIQWGNLEEAQRLFDGMP 114
++ L + SL+A K+++G D+ V N +I+A + G +E A ++F+ M
Sbjct: 123 IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 182
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV----ISWTAAICGFVQNGFSFEALK 170
++ VSW A+++G+ + G + + F+ +N+ ++WTA I G+ Q G S EAL
Sbjct: 183 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 242
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK----------AGFEKHVS 220
+F +++ SG PN VT S+ ACA + F G+ + K G ++ +
Sbjct: 243 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 302
Query: 221 VCNSLITLSLKMGEVDLARSVFDR--MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V N+LI + K ARS+FD +E+R+VV+WTV++ + GD +A ++F EM
Sbjct: 303 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 362
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
Y PN S +L A A L A+R G +
Sbjct: 363 E-----------------------------PYGVAPNAYTISCILMACAHLAAIRIGKQI 393
Query: 339 HAHVLKIGI--EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
HA+VL+ F++N LI++YSKCG+ R VFDS+ +K +SW SM+ GYG
Sbjct: 394 HAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKS---AISWTSMMTGYG 450
Query: 397 LNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNK 451
++G+ EA ++FD M K +D+++ ++ D + F+ M G P
Sbjct: 451 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 510
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
++ + A L+K K +K + + AL ++E + +
Sbjct: 511 EHYAYAIDLLARFGRLDKA----WKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALN 566
Query: 511 R---MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+ M +N+ S+T++ A +G K+ + M+K+ I
Sbjct: 567 KLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 607
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 271/458 (59%), Gaps = 39/458 (8%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++++++++ G L +A+ +FD+MP+RN VSW+ MI+ Y+ + ++A M R +P
Sbjct: 5 ILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRP 64
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N +S VL A L LR +H ++KIG++ DVF+ +ALID+YS+ GE
Sbjct: 65 NMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGE-------- 113
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+E A +FD M + V WS+II+G+ ++ D
Sbjct: 114 --------------------------LENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDE 147
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F M +G + ++T +SVL A +A LE G+ +H ++K + D+ L AL D
Sbjct: 148 ALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLD 205
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K G +E + VF RM +K+ ISW+ M+ GLA++GY+KE++ LFE M+ I PN +T
Sbjct: 206 MYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVT 265
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
I+ VLFACSH+GLV++GL YF+SM+ ++ I P HY C++D+L R+GRLSEA D IN M
Sbjct: 266 IVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEM 325
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
EPD+ W +LL+ C+ ++N +A A K + +L + YVLLSNIYA+ RW D
Sbjct: 326 ECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVA 385
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VR+ MT +G++K GCSW+EV Q+H F +P+
Sbjct: 386 EVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQ 423
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 195/439 (44%), Gaps = 103/439 (23%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI+ ++K G + ++ F++ P +NV+SWT I + + +AL+ + +L GV+PN
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
T+SS+ +AC + + R + I K G + V V ++LI
Sbjct: 66 MFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALI----------------- 105
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
DV+ G+L A R+FDEM + V WS +IA + Q+ +EA RL
Sbjct: 106 --------------DVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRL 151
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F++M R F + + VL A L L G VH HVLK ++D+ ++NAL+D+Y K
Sbjct: 152 FKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCK 209
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG +D VF +VEKD V+SW++MI G NG +EA +LF++M
Sbjct: 210 CGSLEDANAVFVRMVEKD---VISWSTMIAGLAQNGYSKEALKLFESMK----------- 255
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+ G PN T VL A + H +++ G
Sbjct: 256 --------------------VLGIKPNYVTIVGVLFACS-----------HAGLVEEGLY 284
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
Y S + +F P + + M+ L +G E+++L EM
Sbjct: 285 Y-----------------FHSMKELFGIDPGREH--YGCMIDLLGRAGRLSEAVDLINEM 325
Query: 544 EKTSITPNELTILSVLFAC 562
E P+ +T ++L AC
Sbjct: 326 E---CEPDAVTWRALLNAC 341
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 67/323 (20%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALI + + G +E ++ F+ +++ W++ I GF QN EAL+LF ++ +G
Sbjct: 102 SALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFL 161
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ T +S+ +AC + LG V + K +++ + + N+L+ + K G ++ A +V
Sbjct: 162 AQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAV 219
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F RM ++DV+SW S MIA Q+GY +EA
Sbjct: 220 FVRMVEKDVISW-------------------------------STMIAGLAQNGYSKEAL 248
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+LF M KPN VL A + HA + +E+ ++ +++ +L+
Sbjct: 249 KLFESMKVLGIKPNYVTIVGVLFACS-----------HAGL----VEEGLYYFHSMKELF 293
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWS 420
++ H + MI G G++ EA +L + M D V+W
Sbjct: 294 G---------------IDPGREH---YGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWR 335
Query: 421 AIISGYLEHKQFDLVFAVFNEML 443
A+++ H+ D+ ++L
Sbjct: 336 ALLNACRVHRNVDVAIHAAKQIL 358
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 28/224 (12%)
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
FL L + Y K G + ++ VFD+MPD+N +SWT M+ + + +++ M +
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ PN T SVL AC GL + L+ + + + + ++D+ SR G L
Sbjct: 61 GVRPNMFTYSSVLRAC--DGLFN--LRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A + M D W+S+++G + A R K + + AG++ S
Sbjct: 117 ALRVFDEM-VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKR------AGFLAQQTTLTS 169
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
LR G + +E+ QVH K D +
Sbjct: 170 V-----------------LRACTGLALLELGRQVHVHVLKYDQD 196
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF F + T +L+ T L+ GR +H H++K ++ L LL MY
Sbjct: 151 LFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYC 208
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTA 123
+AN + + D++ + MI Q G +EA +LF+ M + N V+
Sbjct: 209 KCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVG 268
Query: 124 LISGFMKHGRVEESMWYFER-------NPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
++ G VEE ++YF +P + + G + G EA+ L +
Sbjct: 269 VLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLG--RAGRLSEAVDL---IN 323
Query: 177 ESGVKPNEVTFSSICKAC 194
E +P+ VT+ ++ AC
Sbjct: 324 EMECEPDAVTWRALLNAC 341
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 208/713 (29%), Positives = 343/713 (48%), Gaps = 105/713 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H +IK G ++ + LL MY A ++ ++ D+V +N M+ Q
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 100 WGNLEEAQRLFDGMPER----NEVSW---------------------------------- 121
++E LF M ++V++
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 122 -TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TAL++ ++ G V+ + F+ ++V+ + A I Q+G + EA + + ++ GV
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
N T+ SI AC+ G + I + G V + N+LI++
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM------------ 374
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ GDL +AR +F MP+R+ +SW+ +IA Y + EA
Sbjct: 375 -------------------YARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEA 415
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
RL++QM KP F +LSA A+ A G +H +L+ GI+ + ++NAL+++
Sbjct: 416 MRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNM 475
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y +C G + EA+ +F+ R+ +SW+
Sbjct: 476 YRRC----------------------------------GSLMEAQNVFEGTQARDVISWN 501
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
++I+G+ +H ++ + +F EM P+ TF+SVL + +LE GK +HG+I +
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G DV LG AL + Y + G ++ +R VF + ++ +SWT M+ G A+ G ++I LF
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621
Query: 541 EEMEKTSITPNE-LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
+M+ P + T S+L AC+H+GLV +G + F+SME Y + P HY C+V +L
Sbjct: 622 WQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 681
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+ R EAE IN MPF PD+ W +LL C+ + N +AE A N KL +PA Y+L
Sbjct: 682 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 741
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
LSN+YA+AGRW D +R++M +G+RK G SW+EV N +H F +P+
Sbjct: 742 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPE 794
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 164/613 (26%), Positives = 271/613 (44%), Gaps = 115/613 (18%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI+ ++K V ++ F+ P ++VISW + I + Q GF +A +LF ++ +G PN
Sbjct: 68 LINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPN 127
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++T+ SI AC + G + I KAG+++ V NSL+++ K G++ AR VF
Sbjct: 128 KITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFA 187
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ RDVVS+ +L + Y Q Y +E L
Sbjct: 188 GISPRDVVSYNTMLGL-------------------------------YAQKAYVKECLGL 216
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F QM+ P+ + +L A + L G +H ++ G+ D+ + AL+ + +
Sbjct: 217 FGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVR 276
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ + F I ++D VV +N++I +G EA E + M R+D
Sbjct: 277 CGDVDSAKQAFKGIADRD---VVVYNALIAALAQHGHNVEAFEQYYRM--RSD------- 324
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
G N++T+ S+L A ++ +LE GK +H I + G
Sbjct: 325 ----------------------GVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
DV +G AL YA+ GD+ +R +F MP ++ ISW ++ G A E++ L+++M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + P +T L +L AC++S G K + IK NG +++M R G
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADG-KMIHEDILRSGIKSNGHLANALMNMYRRCGS 481
Query: 604 LSEAEDFI-----------NSM-----------------------PFEPDSNAWASLLSG 629
L EA++ NSM EPD+ +AS+LSG
Sbjct: 482 LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541
Query: 630 CKTYK----NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV------RKL 679
CK + +QI R ++ +L + G L+ N+Y G DA NV R +
Sbjct: 542 CKNPEALELGKQIHGRITESGLQL--DVNLGNALI-NMYIRCGSLQDARNVFHSLQHRDV 598
Query: 680 MTEKGLRKSGGCS 692
M+ + GGC+
Sbjct: 599 MSWTAM--IGGCA 609
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 202/403 (50%), Gaps = 46/403 (11%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D+ ++++++++ + +A ++F EMP R+ +SW+ +I+ Y Q G+ ++AF+LF +M
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
F PN + +L+A S L +G +H+ ++K G ++D + N+L+ +Y KCG+
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
R VF I +D VVS+N+M+G Y ++E
Sbjct: 181 RARQVFAGISPRD---VVSYNTMLGLYAQKAYVKE------------------------- 212
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+F +M G P+K T+ ++L A + + L++GK +H ++ G D+ +
Sbjct: 213 ------CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GTAL + GD++S+++ F + D++ + + ++ LA+ G+ E+ + M +
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-----TCVVDMLSRSGR 603
N T LS+L ACS S ++ G K +S +I +G ++ M +R G
Sbjct: 327 ALNRTTYLSILNACSTSKALEAG-KLIHS-----HISEDGHSSDVQIGNALISMYARCGD 380
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
L +A + +MP + D +W ++++G ++ A R K +
Sbjct: 381 LPKARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 146/294 (49%), Gaps = 35/294 (11%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + + +L + L +HA +++ G+ D+F+SN LI++Y KC R V
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKC------RSVL 79
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D A ++F MP+R+ +SW+++IS Y +
Sbjct: 80 D----------------------------AHQVFKEMPRRDVISWNSLISCYAQQGFKKK 111
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F +F EM +G IPNK T+ S+L A S A LE GK +H +IIK G+ D + +L
Sbjct: 112 AFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLS 171
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K GD+ +R+VF + ++ +S+ M+ A+ Y KE + LF +M I+P+++T
Sbjct: 172 MYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVT 231
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+++L A + ++D+G K + + + + R T +V M R G + A+
Sbjct: 232 YINLLDAFTTPSMLDEG-KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAK 284
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 156/353 (44%), Gaps = 45/353 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L +L ++ + G+ +H H+ + G + + L+ MY +A E+ +
Sbjct: 332 TYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTM 391
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PER-----------NEVSWT--- 122
DL+ N +I + + EA RL+ M P R N ++
Sbjct: 392 PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK 451
Query: 123 -------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
AL++ + + G + E+ FE ++VISW + I G Q+G
Sbjct: 452 MIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHG 511
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
A KLF ++ ++P+ +TF+S+ C LG + G I ++G + V++ N
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER---- 279
+LI + ++ G + AR+VF ++ RDV+SWT ++ + G+ +A +F +M
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRP 631
Query: 280 -NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLK 330
+ +++ +++ N +G E +++F M + Y P + ++ L +
Sbjct: 632 PDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRAR 684
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 135/330 (40%), Gaps = 45/330 (13%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L LL + + G+ +H ++++GI +L L+ MY +EA + +
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMK-------- 130
D++ N MI + Q G+ E A +LF M E + +++ +++SG
Sbjct: 493 QARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGK 552
Query: 131 --HGRVEESMWYFE--------------------RNPF-----QNVISWTAAICGFVQNG 163
HGR+ ES + RN F ++V+SWTA I G G
Sbjct: 553 QIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQG 612
Query: 164 FSFEALKLFLKLLESGVKPNE-VTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSV 221
+A++LF ++ G +P + TF+SI AC G +F + + G +
Sbjct: 613 EDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEH 672
Query: 222 CNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFD---EMP 277
L+ L + A ++ ++M D W +L G++ A + ++
Sbjct: 673 YGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLN 732
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
RN + ++ Y +G ++ ++ R M
Sbjct: 733 ARNPAVYILLSNVYAAAGRWDDVAKIRRVM 762
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 338/628 (53%), Gaps = 35/628 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V +++ ++ G ++ A RLF + ++++G+ K ++ ++ YFE
Sbjct: 162 DPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 221
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW I Q+G EAL L +++ GV+ + T++S ACA + F LG
Sbjct: 222 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL--FSLGW- 278
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
G + H V SL + D + +++++ + G
Sbjct: 279 --------GKQLHAKVIRSLPQI--------------------DPYVASALIELYAKCGS 310
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EA+R+F+ + +RN VSW+V+I Q ++ LF QM + + ++S
Sbjct: 311 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 370
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L G +H+ LK G + + +SN+LI LY+KCG+ ++ VF S+ E+D+
Sbjct: 371 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI--- 427
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW SMI Y G + +A+E FD M RN ++W+A++ Y++H + +++ ML
Sbjct: 428 VSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
Query: 446 GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
++ P+ T+ ++ A + + + G + G +K G +V + A Y+K G I
Sbjct: 488 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 547
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
++++FD + K+ +SW M+ G ++ G K++ F++M P+ ++ ++VL CSH
Sbjct: 548 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 607
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +G YF+ M ++ I P H++C+VD+L R+G L+EA+D I+ MP +P + W
Sbjct: 608 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 667
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CK + N+++AE A K++++L Y+LL+ IY+ AG+ D+ VRKLM +KG
Sbjct: 668 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 727
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K+ G SW+EV N+VH F +P+
Sbjct: 728 IKKNPGYSWMEVENKVHVFKADDVSHPQ 755
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 244/506 (48%), Gaps = 53/506 (10%)
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
LT + LG K L A ++++ L D V + +I + G+ +EA+R+F+ + +RN
Sbjct: 267 LTACARLFSLGWGKQLHA-KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN 325
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
VSWT LI G +++ FS ++++LF ++
Sbjct: 326 SVSWTVLIGGSLQY------------------------------ECFS-KSVELFNQMRA 354
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
+ ++ +++ C D LG + L K+G + + V NSLI+L K G++
Sbjct: 355 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 414
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A VF M +RD+VSWT ++ + ++G++ +AR FD M RN ++W+ M+ Y Q G
Sbjct: 415 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAE 474
Query: 298 EEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E+ +++ M ++ P+ + + A + A + G + H +K G+ +V ++NA
Sbjct: 475 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANA 534
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----P 412
I +YSKCG + + +FD + KD VVSWN+MI GY +G ++A + FD+M
Sbjct: 535 AITMYSKCGRISEAQKLFDLLNGKD---VVSWNAMITGYSQHGMGKQAAKTFDDMLSKGA 591
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEML--LSGEIPNKSTFSSVLCASASVASLEKG 470
K + +S+ A++SG H ++ +M+ + G P FS ++ L +
Sbjct: 592 KPDYISYVAVLSG-CSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 650
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE----SSRRVFD-RMPDKNEISWTVMVR 525
KDL I K+ + AL G+ E +++ VF+ PD S+ ++ +
Sbjct: 651 KDL---IDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSG--SYMLLAK 705
Query: 526 GLAESGYAKESINLFEEMEKTSITPN 551
+++G + +S + + M I N
Sbjct: 706 IYSDAGKSDDSAQVRKLMRDKGIKKN 731
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 150/631 (23%), Positives = 282/631 (44%), Gaps = 86/631 (13%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L+ S+ + RALHG L+ G+ +L LL YL
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYL-------------------- 66
Query: 88 VVHNCMINANIQWGNLEEAQRLFDG-MPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+C G L +A+RL + E N ++ +++G+ K G + ++ F+R P
Sbjct: 67 ---SC--------GALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPR 115
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V SW L+ +P S C E L +
Sbjct: 116 RDVASWNT--------------------LMSDTSRPAGSWMSCGALGCRE-----LAPQL 150
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
GL +K F V +L+ + ++ G VD A +F ++E+ + +L + ++ +
Sbjct: 151 LGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGI 210
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A F++M ER+ VSW++MIA +QSG EA L +M R + +++ ++ L+A
Sbjct: 211 DHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTAC 270
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L +L G +HA V++ + D ++++ALI+LY+KCG K+ + VF+S+ +++ V
Sbjct: 271 ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN---SV 327
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
SW +IGG ++ ELF+ M + + + +ISG L + +
Sbjct: 328 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 387
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L SG +S++ A L+ + + + + D+ T++ Y++ G+I
Sbjct: 388 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE----RDIVSWTSMITAYSQIGNI 443
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFA 561
+R FD M +N I+W M+ + G ++ + ++ M + +TP+ +T +++
Sbjct: 444 IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG 503
Query: 562 CSHSG---LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DFINSMP 615
C+ G L D+ + + I N+ + M S+ GR+SEA+ D +N
Sbjct: 504 CADIGANKLGDQIIGHTVKAGLILNVSVA----NAAITMYSKCGRISEAQKLFDLLNG-- 557
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
D +W ++++G Y + ++A K
Sbjct: 558 --KDVVSWNAMITG---YSQHGMGKQAAKTF 583
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 208/462 (45%), Gaps = 55/462 (11%)
Query: 182 PNEVT--FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
P+ VT + ++C ++ G + G V + N+L+ L G + AR
Sbjct: 16 PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75
Query: 240 SVFDR-MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+ +++ +V++ ++++ + + G L +A +FD MP R+ SW+ ++ + + P
Sbjct: 76 RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLM---SDTSRPA 132
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
++ SC ++ LA + K D + AL+
Sbjct: 133 GSW--------------MSCGALGCRELAP--------QLLGLFWKFDFWGDPDVETALV 170
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D++ +CG +F I + + NSM+ GY ++ A E F++M +R+ VS
Sbjct: 171 DMFVRCGYVDFASRLFSQI---ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVS 227
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+ +I+ + + + EM G + +T++S L A A + SL GK LH K+I
Sbjct: 228 WNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI 287
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ D ++ +AL + YAK G + ++RVF+ + D+N +SWTV++ G + +S+
Sbjct: 288 RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVE 347
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME-----PIYNIKPNGRHYTC 593
LF +M + ++ + +++ C FN M+ ++++ H
Sbjct: 348 LFNQMRAELMAIDQFALATLISGC------------FNRMDLCLGRQLHSLCLKSGHNRA 395
Query: 594 VV------DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+V + ++ G L AE +SM E D +W S+++
Sbjct: 396 IVVSNSLISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITA 436
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 37/294 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH +K+G ++ ++ L+ +Y A + ++ D+V MI A Q
Sbjct: 380 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ 439
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+ +A+ FDGM RN ++W A++ +++HG E
Sbjct: 440 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEE------------------------ 475
Query: 160 VQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+ LK++ +L + V P+ VT+ ++ + CA+I +LG + G KAG +
Sbjct: 476 -------DGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILN 528
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
VSV N+ IT+ K G + A+ +FD + +DVVSW ++ + + G +A + FD+M
Sbjct: 529 VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLS 588
Query: 279 R----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
+ + +S+ +++ + SG +E F MTR + P FS ++ L
Sbjct: 589 KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLG 642
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 217/725 (29%), Positives = 348/725 (48%), Gaps = 104/725 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
++K + V GR +H TG+ + Y+ + L+ MY + +A + + D
Sbjct: 147 VVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRD 206
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTA----------LISGFMKHG 132
V+ N M++ I+ G++ A RLF M E N + L+SG H
Sbjct: 207 CVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHS 266
Query: 133 ------------------------RVEESMW-YFERNPFQNVISWTAAICGFVQNGFSFE 167
R + W FE P ++++W I G VQNG E
Sbjct: 267 LAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDE 326
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL LF +L SG +P+ VT S+ A ++N + G V G I + + ++L+
Sbjct: 327 ALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALV- 385
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
D++ + D+ AR ++D + V S +
Sbjct: 386 ------------------------------DIYFKCRDVRTARNLYDAARAIDVVIGSTV 415
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y +G E+A ++FR + KPN + VL A AS+ AL G +H +VL+
Sbjct: 416 ISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAY 475
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E ++ +AL+D+Y+KCG D++H +
Sbjct: 476 EGKCYVESALMDMYAKCGRL-------------DLSHYI--------------------- 501
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F M +++V+W+++IS + ++ + +F +M + G N T SS L A AS+ ++
Sbjct: 502 FSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAI 561
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
GK++HG IIK D+F +AL D YAK G++E + RVF+ MPDKNE+SW ++
Sbjct: 562 YYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAY 621
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
G KES++ M++ P+ +T L+++ AC+H+GLV++GL+ F M Y I P
Sbjct: 622 GAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPR 681
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
H+ C+VD+ SRSGRL +A FI MPF+PD+ W +LL C+ ++N ++A+ A + L+
Sbjct: 682 MEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELF 741
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
KL + YVL+SNI A AGRW VR+LM + + K G SWV+V N H F
Sbjct: 742 KLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASD 801
Query: 708 DHNPK 712
+P+
Sbjct: 802 KSHPE 806
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/569 (24%), Positives = 250/569 (43%), Gaps = 81/569 (14%)
Query: 72 SLEANEIVKDLNGFD---LVVHNCMINANIQWGNLEEAQRLFDG-MPERNEVSW-TALIS 126
+ A E+V D++ D ++ C+ ++ G A+ + G + N ++ T L+
Sbjct: 19 TFSATEVVTDVSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLG 78
Query: 127 GFMKHGRVEESMWYFERNPFQNV---ISWTAAICGFVQNGFSFEALKLFLKLL--ESGVK 181
++ R +++ F P + W I GF G A+ ++K+ +
Sbjct: 79 MYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPS 138
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T + K+CA + LG V G V V ++LI + G + AR
Sbjct: 139 PDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDA 198
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M RD V W V++D +I+ GD+G A
Sbjct: 199 FDGMPWRDCVLWNVMMDGYIKAGDVG-------------------------------GAV 227
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
RLFR M +PN + + LS A+ L SG+ +H+ +K G+E++V ++N L+ +Y
Sbjct: 228 RLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMY 287
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KC D +F+ + D +V+WN MI G NG ++EA
Sbjct: 288 AKCRCLDDAWRLFELLPRDD---LVTWNGMISGCVQNGLLDEA----------------- 327
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+F +ML SG P+ T S+L A + L++GK++HG II+
Sbjct: 328 --------------LGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNC 373
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D FL +AL D Y K D+ ++R ++D + + + ++ G +G +++++ +F
Sbjct: 374 VHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFR 433
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY--TCVVDMLS 599
+ + I PN +T+ SVL AC+ + G + + G+ Y + ++DM +
Sbjct: 434 YLLEQCIKPNAVTVASVLPACASISALPLGQEIHGY---VLRNAYEGKCYVESALMDMYA 490
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ GRL + + M + D W S++S
Sbjct: 491 KCGRLDLSHYIFSKMSLK-DEVTWNSMIS 518
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 231/537 (43%), Gaps = 109/537 (20%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C L ++ ++ G LH +K G+ +E + LL MY R +A + + L
Sbjct: 244 TLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELL 303
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLF-------------------------DGMPERN 117
DLV N MI+ +Q G L+EA LF +G+ +
Sbjct: 304 PRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGK 363
Query: 118 EVSW--------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
EV +AL+ + K V + ++ +V+ + I G+V NG
Sbjct: 364 EVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNG 423
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
S +AL++F LLE +KPN VT +S+ ACA I+ LG + G + + +E V +
Sbjct: 424 MSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVES 483
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L+ + K G +DL+ +F +M +D V+W ++ F
Sbjct: 484 ALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSF----------------------- 520
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+Q+G P+EA LFRQM K N S LSA ASL A+ G +H ++
Sbjct: 521 --------SQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVII 572
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K I+ D+F +ALID+Y+KCG + VF+ + +K+ VSWNS+I YG +G ++E
Sbjct: 573 KGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKN---EVSWNSIISAYGAHGLVKE 629
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
+ M + G P+ TF +++ A A
Sbjct: 630 SVSFLHRMQEE-------------------------------GYKPDHVTFLALISACAH 658
Query: 464 VASLEKGKDLHGKIIK---LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
+E+G L + K + + F + D Y++SG ++ + + MP K +
Sbjct: 659 AGLVEEGLQLFQCMTKEYLIAPRMEHF--ACMVDLYSRSGRLDKAIQFIADMPFKPD 713
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 7/252 (2%)
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKR---NDVSWSAIISGYLE--HKQFDLVFAV 438
H+ ++G Y L + +A +F +P+ + + W+ +I G+ H ++F V
Sbjct: 69 HLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYV 128
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ P+ T V+ + A++ ++ G+ +H G DV++G+AL Y+
Sbjct: 129 KMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSD 188
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
+G + +R FD MP ++ + W VM+ G ++G ++ LF M + PN T+
Sbjct: 189 AGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACF 248
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L C+ + G++ +S+ ++ ++ M ++ L +A +P +
Sbjct: 249 LSVCAAEADLLSGVQ-LHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRD- 306
Query: 619 DSNAWASLLSGC 630
D W ++SGC
Sbjct: 307 DLVTWNGMISGC 318
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 338/628 (53%), Gaps = 35/628 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V +++ ++ G ++ A RLF + ++++G+ K ++ ++ YFE
Sbjct: 172 DPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 231
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW I Q+G EAL L +++ GV+ + T++S ACA + F LG
Sbjct: 232 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL--FSLGW- 288
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
G + H V SL + D + +++++ + G
Sbjct: 289 --------GKQLHAKVIRSLPQI--------------------DPYVASALIELYAKCGS 320
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EA+R+F+ + +RN VSW+V+I Q ++ LF QM + + ++S
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L G +H+ LK G + + +SN+LI LY+KCG+ ++ VF S+ E+D+
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI--- 437
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW SMI Y G + +A+E FD M RN ++W+A++ Y++H + +++ ML
Sbjct: 438 VSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 497
Query: 446 GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
++ P+ T+ ++ A + + + G + G +K G +V + A Y+K G I
Sbjct: 498 KDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISE 557
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
++++FD + K+ +SW M+ G ++ G K++ F++M P+ ++ ++VL CSH
Sbjct: 558 AQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSH 617
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +G YF+ M ++ I P H++C+VD+L R+G L+EA+D I+ MP +P + W
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 677
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CK + N+++AE A K++++L Y+LL+ IY+ AG+ D+ VRKLM +KG
Sbjct: 678 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKG 737
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K+ G SW+EV N+VH F +P+
Sbjct: 738 IKKNPGYSWMEVENKVHVFKADDVSHPQ 765
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 154/632 (24%), Positives = 295/632 (46%), Gaps = 62/632 (9%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L+ S+ + RALHG L+ G+ +L
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFL----------------------------- 41
Query: 88 VVHNCMINANIQWGNLEEAQRLFDG-MPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
N +++A G L +A+RL + E N ++ +++G+ K G + ++ F+R P
Sbjct: 42 --QNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPR 99
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLS 205
++V SW + G+ Q + L+ F+ + SG PN TF + K+C + L
Sbjct: 100 RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQ 159
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ GL +K F V +L+ + ++ G VD A +F ++E+ + +L + ++
Sbjct: 160 LLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYG 219
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ A F++M ER+ VSW++MIA +QSG EA L +M R + +++ ++ L+A
Sbjct: 220 IDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTA 279
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L +L G +HA V++ + D ++++ALI+LY+KCG K+ + VF+S+ +++
Sbjct: 280 CARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN---S 336
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNE 441
VSW +IGG ++ ELF+ M + + + +ISG L + +
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
L SG +S++ A L+ + + + + D+ T++ Y++ G+
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE----RDIVSWTSMITAYSQIGN 452
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLF 560
I +R FD M +N I+W M+ + G ++ + ++ M + +TP+ +T +++
Sbjct: 453 IIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFR 512
Query: 561 ACSHSG---LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DFINSM 614
C+ G L D+ + + I N+ + M S+ GR+SEA+ D +N
Sbjct: 513 GCADIGANKLGDQIIGHTVKAGLILNVSVA----NAAITMYSKCGRISEAQKLFDLLNG- 567
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
D +W ++++G Y + ++A K
Sbjct: 568 ---KDVVSWNAMITG---YSQHGMGKQAAKTF 593
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 164/352 (46%), Gaps = 38/352 (10%)
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
T + L + S AL +H ++ +G+ VF+ N L+ Y CG D R +
Sbjct: 4 TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLR 63
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ +++ +V++ N M+ GY G + +A+ELFD MP+R+ SW+ ++SGY + ++F
Sbjct: 64 ADIKE--PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDG 121
Query: 436 FAVFNEMLLSGE-IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F M SG+ +PN TF V+ + ++ E L G K F D + TAL D
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD 181
Query: 495 TYAKSGDIESSRRVFDR-------------------------------MPDKNEISWTVM 523
+ + G ++ + R+F + M +++ +SW +M
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMM 241
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEPIY 582
+ L++SG +E++ L EM + + + T S L AC+ + G + + + +
Sbjct: 242 IAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP 301
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
I P + ++++ ++ G EA+ NS+ + +S +W L+ G Y+
Sbjct: 302 QIDPYVA--SALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLIGGSLQYE 350
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 37/294 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH +K+G ++ ++ L+ +Y A + ++ D+V MI A Q
Sbjct: 390 GRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQ 449
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+ +A+ FDGM RN ++W A++ +++HG E
Sbjct: 450 IGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEE------------------------ 485
Query: 160 VQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+ LK++ +L + V P+ VT+ ++ + CA+I +LG + G KAG +
Sbjct: 486 -------DGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILN 538
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
VSV N+ IT+ K G + A+ +FD + +DVVSW ++ + + G +A + FD+M
Sbjct: 539 VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLS 598
Query: 279 R----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
+ + +S+ +++ + SG +E F MTR + P FS ++ L
Sbjct: 599 KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLG 652
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 308/592 (52%), Gaps = 66/592 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T L+ + K G E++ F +++++W+A I VQ G+ EAL LF ++ +K
Sbjct: 368 TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMK 427
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN VT SI ACA+++ +LG S+ KA + +S +L+++ K G A +
Sbjct: 428 PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTT 487
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+R M R+ V+W+ +I Y Q G P A
Sbjct: 488 FNR-------------------------------MSSRDIVTWNSLINGYAQIGDPYNAI 516
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F ++ + P+ V+ A A L L G +H ++K+G E D + NALID+Y
Sbjct: 517 DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWS 420
+KCG + A+ LF+ +++V+W+
Sbjct: 577 AKCGS----------------------------------LPSAEFLFNKTDFTKDEVTWN 602
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
II+ Y+++ + F++M L PN TF SVL A+A +A+ +G H II++
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM 662
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF + +G +L D YAK G ++ S ++F+ M K+ +SW M+ G A G+ +I LF
Sbjct: 663 GFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALF 722
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
M+++ + + ++ +SVL AC H+GLV++G K F+SM Y+IKP+ HY C+VD+L R
Sbjct: 723 SLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGR 782
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G E FI MP EPD+ W +LL C+ + N ++ E A+ +L KL +PA +V+L
Sbjct: 783 AGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVL 842
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
S+IYA +GRW DA R M + GL+K+ GCSWVE++N+VH F +P+
Sbjct: 843 SSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQ 894
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 244/525 (46%), Gaps = 71/525 (13%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
AQ + G + + T LI+ + + + + F+ P + I W + I + ++
Sbjct: 52 HAQIIVSGFKHHHSI--THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
EAL+++ ++E G++P++ TF+ + KAC + + G+ G I + G E+ V +
Sbjct: 110 YNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAG 169
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ + KMG++ AR VFD+M KRDVV +W
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVV-------------------------------AW 198
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ MIA +QS P EA FR M +P++ + + L + +H +V +
Sbjct: 199 NAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFR 258
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
V SN LIDLYSKCG+ R VFD +V++D VSW +M+ GY NG E
Sbjct: 259 RDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQD---DVSWGTMMAGYAHNGCFVEV 313
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
ELFD M L NK + S A+A
Sbjct: 314 LELFDKMK-------------------------------LGNVRINKVSAVSAFLAAAET 342
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
LEKGK++HG ++ D+ + T L YAK G+ E ++++F + ++ ++W+ ++
Sbjct: 343 IDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAII 402
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
L ++GY +E+++LF+EM+ + PN +T++S+L AC+ L+ G K + ++
Sbjct: 403 AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKADM 461
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ T +V M ++ G + A N M D W SL++G
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLING 505
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 167/664 (25%), Positives = 285/664 (42%), Gaps = 109/664 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK T + +G HG + + G+ ++ ++ L+ MY A E+ + D
Sbjct: 135 VLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRD 194
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISG--------------- 127
+V N MI Q + EA F M E + VS L G
Sbjct: 195 VVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHG 254
Query: 128 ------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
+ K G V+ + F++ Q+ +SW + G+ NG E L
Sbjct: 255 YVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVL 314
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
+LF K+ V+ N+V+ S A AE D G + G + + + V L+ +
Sbjct: 315 ELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY 374
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
K GE + +A+++F + R+ V+WS +IA
Sbjct: 375 AKCGETE-------------------------------KAKQLFWGLQGRDLVAWSAIIA 403
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Q+GYPEEA LF++M KPN +L A A L L+ G +H +K ++
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D+ AL+ +Y+KCG A F+
Sbjct: 464 DLSTGTALVSMYAKCGF----------------------------------FTAALTTFN 489
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M R+ V+W+++I+GY + +F ++ LS P+ T V+ A A + L++
Sbjct: 490 RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLA 528
G +HG I+KLGF D + AL D YAK G + S+ +F++ K+E++W V++
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
++G+AKE+I+ F +M + PN +T +SVL A ++ +G+ + + + N
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM-GFLSNT 668
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
++DM ++ G+L +E N M + D+ +W ++LSG Y +RA+ L+
Sbjct: 669 LVGNSLIDMYAKCGQLDYSEKLFNEMDHK-DTVSWNAMLSG---YAVHGHGDRAIA-LFS 723
Query: 649 LAEE 652
L +E
Sbjct: 724 LMQE 727
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 156/616 (25%), Positives = 256/616 (41%), Gaps = 154/616 (25%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +HG ++ I + + T L++MY ++ +A ++ L G DLV + +I A +
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406
Query: 99 QWGNLEEAQRLFDGM------PERNEV--------------------------------- 119
Q G EEA LF M P R +
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+ TAL+S + K G ++ F R +++++W + I G+ Q G + A+ +F KL S
Sbjct: 467 TGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSA 526
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ P+ T + ACA +ND G + GLI K GFE V N+LI + K G + A
Sbjct: 527 INPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+F++ + ++EV+W+V+IA Y Q+G+ +E
Sbjct: 587 FLFNKTDF------------------------------TKDEVTWNVIIAAYMQNGHAKE 616
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A F QM +F PN+ F VL A A L A R GM HA ++++G + + N+LID
Sbjct: 617 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 676
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG+ +F+ + KD VSWN+M+ GY ++G + A LF M +
Sbjct: 677 MYAKCGQLDYSEKLFNEMDHKD---TVSWNAMLSGYAVHGHGDRAIALFSLMQE------ 727
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
Q D V +F SVL A +E+G
Sbjct: 728 --------SQVQIDSV-----------------SFVSVLSACRHAGLVEEG--------- 753
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAK 534
R++F M DK I + MV L +G
Sbjct: 754 --------------------------RKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787
Query: 535 ESINLFEEMEKTSITPNELTILSVLFAC---SHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
E++ + M + P+ ++L +C S+ L + L + +EP N H+
Sbjct: 788 ETLGFIKVM---PVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEP-----RNPAHF 839
Query: 592 TCVVDMLSRSGRLSEA 607
+ + ++SGR ++A
Sbjct: 840 VVLSSIYAQSGRWADA 855
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 138/272 (50%), Gaps = 8/272 (2%)
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
L S C + I+ H S +I Y L + + A+ +FD+ P + + W
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILW 97
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+++I Y KQ++ ++ M+ G P+K TF+ VL A +L++G HG+I +
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDR 157
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
G DVF+G L D Y+K GD++ +R VFD+MP ++ ++W M+ GL++S E+++
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 540 FEEMEKTSITPNELTILSVLFA-CSHSGL-VDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
F M+ + P+ +++L++ C S + + + + + + NG ++D+
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG-----LIDL 272
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
S+ G + A + M + D +W ++++G
Sbjct: 273 YSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 159/422 (37%), Gaps = 64/422 (15%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
L +INP+ + LL D+ QG +HG ++K G + ++ L+ MY
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLD------QGTCIHGLIVKLGFESDCHVKNALIDMY- 576
Query: 68 GSRKSLEANEIVKDLNGF--DLVVHNCMINANIQWGNLEEAQRLFDGM------PER--- 116
SL + E + + F D V N +I A +Q G+ +EA F M P
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636
Query: 117 ------------------------------NEVSWTALISGFMKHGRVEESMWYFERNPF 146
N + +LI + K G+++ S F
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH 696
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++ +SW A + G+ +G A+ LF + ES V+ + V+F S+ AC G +
Sbjct: 697 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKI 756
Query: 207 F-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF---- 260
F + K + + ++ L + G D M + D W +L
Sbjct: 757 FHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHS 816
Query: 261 -IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+++G++ + ++ RN + V+ + Y QSG +A + +M K C
Sbjct: 817 NVKLGEVALDHLV--KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS 874
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ L + A R G H +E + N L++ K G D V ++ E
Sbjct: 875 WVELK--NKVHAFRVGDKSHPQ-----LESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEE 927
Query: 380 KD 381
+D
Sbjct: 928 ED 929
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/654 (30%), Positives = 326/654 (49%), Gaps = 83/654 (12%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
+++ F + N+++ T + GF++ G + ++ FE+ + W I G+ NG
Sbjct: 45 QSKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGL 104
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
EA+ + ++ G++ + TF + KAC E+ +G V G + K GF+ V VCN
Sbjct: 105 FQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNF 164
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
LI + LK+G FIE+ A ++FDEMP R+ VSW
Sbjct: 165 LIDMYLKIG--------------------------FIEL-----AEKVFDEMPVRDLVSW 193
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ M++ Y G + F++M R K + L A + LRSGM +H V++
Sbjct: 194 NSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIR 253
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA--------------------- 383
+E D+ + +LID+Y KCG+ VF+ I K++
Sbjct: 254 SELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVIT 313
Query: 384 -------------------------------HVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
++V +++ YG G+++ A+ +F+ M
Sbjct: 314 MINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMN 373
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
++N VSW+ +++ Y++++Q+ +F +L P+ T +SVL A A +AS +GK
Sbjct: 374 EKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQ 433
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+H I+KLG + F+ A+ YAK GD++++R FD M K+ +SW M+ A G+
Sbjct: 434 IHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGF 493
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
+ SI F EM PN T +S+L ACS SGL+D+G +FNSM+ Y I P HY
Sbjct: 494 GRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYG 553
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
C++D+L R+G L EA+ FI MP P + W SLL+ + + + +AE A +++ L +
Sbjct: 554 CMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHD 613
Query: 653 HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
+ YVLLSN+YA AGRW D ++ LM E+GL K+ GCS V++ + F +
Sbjct: 614 NTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQ 667
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 217/488 (44%), Gaps = 123/488 (25%)
Query: 84 GFDLVVHNC--MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GFDL V+ C +I+ ++ G +E A+++FD MP R+ VSW +++SG+ G
Sbjct: 154 GFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDG--------- 204
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+G S +L F ++L G K + S AC+ + R
Sbjct: 205 --------------------DGLS--SLMCFKEMLRLGNKADRFGMISALGACSIEHCLR 242
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT------- 254
G+ + + ++ E + V SLI + K G+VD A VF+R+ +++V+W
Sbjct: 243 SGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQ 302
Query: 255 ----VILDV----------------------------------------FIEM----GDL 266
VI DV ++M G+L
Sbjct: 303 EDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGEL 362
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A +F++M E+N VSW+ M+A Y Q+ +EA ++F+ + KP+ + VL A+
Sbjct: 363 KLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAV 422
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L + G +H++++K+G+ + FISNA++ +Y+KCG+ + R FD +V KD VV
Sbjct: 423 AELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKD---VV 479
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWN+MI Y ++G R + + F+EM G
Sbjct: 480 SWNTMIMAYAIHGF------------GRTSIQF-------------------FSEMRGKG 508
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESS 505
PN STF S+L A + +++G + ++ G + + D ++G+++ +
Sbjct: 509 FKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEA 568
Query: 506 RRVFDRMP 513
+ + MP
Sbjct: 569 KCFIEEMP 576
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/574 (33%), Positives = 312/574 (54%), Gaps = 35/574 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIND 199
F++ P N+ SW I + +++ +F+++L +S PN+ TF + KA AE
Sbjct: 196 FDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRC 255
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
F +G +V G+ K F V V NSLI G +DLA VF+ +E +
Sbjct: 256 FLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNN---------- 305
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
++ VSW+ M+ + Q GYP++A LF +M PN
Sbjct: 306 -------------------KDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTM 346
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
V+SA A L G V ++ + + ++ + NA ID++ KCGE + R +FD++ +
Sbjct: 347 VSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEK 406
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+DV VSW ++I GY + A+++FD+MP+++ +W+ +ISGY + + A+F
Sbjct: 407 RDV---VSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIF 463
Query: 440 NEMLL--SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
E+ L SG P++ T S L A A + +++ G+ +HG I K + L T+L D Y+
Sbjct: 464 RELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYS 523
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
KSGD+E + VF + +K+ W+ M+ GLA G + +I LF +M++T + PN +T +
Sbjct: 524 KSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTN 583
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
+L ACSHSGLVD+G + F+ ME +Y + P +HY+C+VD+L R+G L EA FI MP
Sbjct: 584 LLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLA 643
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
P ++ W +LL C + N ++AE+A L ++ + YVLLSN+YA G W +R
Sbjct: 644 PSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELR 703
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ M + GL+K GCS +E+ VH F + +P
Sbjct: 704 QQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHP 737
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 194/382 (50%), Gaps = 24/382 (6%)
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSC 318
F L AR++FD++P+ N SW+++I S P ++ +F +M S F PN
Sbjct: 183 FSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFT 242
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
F +++ A+A + G VH +K DVF+ N+LI Y+ CG LVF+ ++
Sbjct: 243 FPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFE-MI 301
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDL 434
E + +VSWNSM+ G+ G ++A +LF+ M N V+ +++S + L
Sbjct: 302 EGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTL 361
Query: 435 VFAVF-----NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
V NEM+++ + N + V C +A + L + K DV
Sbjct: 362 GRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIA-----RGLFDNMEK----RDVVSW 412
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME--KTS 547
T + D YAK + +R +FD MP K+ +W V++ G +SG KE++ +F E++ K+
Sbjct: 413 TTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSG 472
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
P+++T+LS L AC+ G +D G ++ + I+ N T ++DM S+SG + +A
Sbjct: 473 ARPDQVTLLSTLSACAQLGAMDIG-EWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKA 531
Query: 608 EDFINSMPFEPDSNAWASLLSG 629
+ +S+ D W+++++G
Sbjct: 532 IEVFHSIG-NKDVFVWSAMIAG 552
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 141/274 (51%), Gaps = 18/274 (6%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK-- 130
++ NE++ +LN V N I+ ++ G +E A+ LFD M +R+ VSWT +I G+ K
Sbjct: 369 IDRNEMMMNLN-----VCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMS 423
Query: 131 -HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF--LKLLESGVKPNEVTF 187
HG + F+ P +++ +W I G+ Q+G EAL +F L+L +SG +P++VT
Sbjct: 424 EHGIARD---IFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTL 480
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
S ACA++ +G + G I K + + ++ SLI + K G+V+ A VF +
Sbjct: 481 LSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGN 540
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRL 303
+DV W+ ++ G A +F +M E N V+++ ++ + SG +E RL
Sbjct: 541 KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRL 600
Query: 304 FRQMTR-YSFKPNTSCFSIVLSALASLKALRSGM 336
F +M R Y P T +S ++ L L +
Sbjct: 601 FDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEAL 634
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 325/594 (54%), Gaps = 38/594 (6%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TAL+ + G V + FE P NV+SWT+ + G+ +G E L ++ ++ + GV
Sbjct: 414 TALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVS 473
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N+ TF+++ +C + D LG V G I + GFE VSV NSLI++
Sbjct: 474 GNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM------------- 520
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F + EA +FD M E + +SW+ MI+ Y G E+
Sbjct: 521 ------------------FSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESL 562
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
R F M + N++ S +LS +S+ L+ G +H V+K+G++ +V I N L+ LY
Sbjct: 563 RCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLY 622
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD---NMPKRNDVS 418
S+ G ++D LVF ++ E+D+ +SWNSM+ Y +G+ + ++ M K + V+
Sbjct: 623 SEAGRSEDAELVFQAMTERDL---ISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVT 679
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+A+I G+ E+++ + + + G N T S L A+A++A LE+G+ LHG +I
Sbjct: 680 WNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVI 738
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
KLGF D+ + A D Y K G++ ++ + +++ +SW +++ A G +++
Sbjct: 739 KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 798
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
F EM K P+ +T +S+L AC+H GLVD+GL Y++SM + + P H C++D+L
Sbjct: 799 TFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLL 858
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
RSGRLS AE FI MP P+ AW SLL+ C+ + N ++A + ++L +L + YV
Sbjct: 859 GRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYV 918
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
L SN+ A++G+W D N+RK M ++K CSWV+++++VH F ++P+
Sbjct: 919 LYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQ 972
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 181/733 (24%), Positives = 308/733 (42%), Gaps = 158/733 (21%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG +H HLI G + +L T+L+I Y +
Sbjct: 48 QGHLIHTHLITNGFGSDLHLNTKLIIFY-------------------------------V 76
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGF---------------MKH------------ 131
+ G++ A+ +FDGMPER+ VSWTA++SG+ M+H
Sbjct: 77 KVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHALVDF 136
Query: 132 ----GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
G++E++ + F ++V+SW A I G+ GF+ ++ +F +L G+ P+ T
Sbjct: 137 HSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTL 196
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGF-------------------------------- 215
S+ +A AE + + G+I + G+
Sbjct: 197 GSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLK 256
Query: 216 ---------------EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
E ++ N+LI + K GE++ A+ FD ME+++V+SWT ++ +
Sbjct: 257 KDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGY 316
Query: 261 IE--MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ G + AR +FDEM RNE SWS M++ Y + G EEA LF QM +PN
Sbjct: 317 AKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFM 376
Query: 319 FSIVLSALA-SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ +++A + S G VH V+K GI DV++ AL+ Y G + + +F+ +
Sbjct: 377 VASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM 436
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ + VVSW S++ GY +G E V
Sbjct: 437 PDHN---VVSWTSLMVGYSDSGNPGE-------------------------------VLN 462
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
V+ M G N++TF++V + + G + G II+ GF V + +L ++
Sbjct: 463 VYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFS 522
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
+E + VFD M + + ISW M+ A G +ES+ F M N T+ S
Sbjct: 523 SFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSS 582
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML----SRSGRLSEAEDFINS 613
+L CS LK+ + + +K C+ + L S +GR +AE +
Sbjct: 583 LLSVCS----SVDNLKWGRGIHGLV-VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQA 637
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQI-AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
M E D +W S+++ C + + + + L ++ + + L +A +
Sbjct: 638 MT-ERDLISWNSMMA-CYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNE 695
Query: 673 AMNVRKLMTEKGL 685
A+ KL+ EKG+
Sbjct: 696 AVKAYKLIREKGI 708
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 253/553 (45%), Gaps = 91/553 (16%)
Query: 160 VQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+Q+ + L LKLL S + + + I + C + + G + + GF
Sbjct: 5 IQSACNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSD 64
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT------------------------ 254
+ + LI +K+G+V AR+VFD M +R VVSWT
Sbjct: 65 LHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRH 124
Query: 255 -------VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
++D + G + +A +F M ER+ VSW+ MI Y G+ +++F +FR M
Sbjct: 125 CGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSM 184
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG--------------------- 346
R P+ VL A A L +H + ++G
Sbjct: 185 LRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSL 244
Query: 347 ----------IEKDVF----------------ISNALIDLYSKCGETKDGRLVFDSIVEK 380
++KD+F + NALID+Y+K GE +D + FD + EK
Sbjct: 245 RSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEK 304
Query: 381 DVAHVVSWNSMIGGYGLN--GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+ V+SW S+I GY + G M A+ +FD M RN+ SWS ++SGY+ ++ +
Sbjct: 305 N---VISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGL 361
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASL-EKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
F +M G PN +S++ A + + ++G +HG ++K G DV++GTAL Y
Sbjct: 362 FCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYG 421
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
G + +++++F+ MPD N +SWT ++ G ++SG E +N+++ M + ++ N+ T +
Sbjct: 422 SIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFAT 481
Query: 558 VLFACSHSGLVDKGLKYFNSMEPI--YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
V +C GL++ + + + I Y + + ++ M S + EA + M
Sbjct: 482 VTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN 538
Query: 616 FEPDSNAWASLLS 628
E D +W +++S
Sbjct: 539 -ECDIISWNAMIS 550
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 33/274 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +HG ++K G+ + LL +Y + +S +A + + + DL+ N M+ +Q
Sbjct: 596 GRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQ 655
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + DG+ +++ ++ G+ + ++W A I G
Sbjct: 656 DG------KCLDGLK---------ILAELLQMGKPDR-------------VTWNALIGGH 687
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+N EA+K + + E G+ N +T S+ A A + G + GL+ K GFE +
Sbjct: 688 AENEEPNEAVKAYKLIREKGIPANYITMVSL-AATANLAVLEEGQQLHGLVIKLGFESDL 746
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM--- 276
V N+ + + K GE+ + + R +SW +++ F G +AR F EM
Sbjct: 747 HVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKL 806
Query: 277 -PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
P+ + V++ +++ N G +E + MTR
Sbjct: 807 GPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR 840
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 36/238 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL V N ++ + G + + ++ R+ +SW LIS F +HG
Sbjct: 745 DLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHG------------C 792
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
FQ +A + F ++L+ G KP+ VTF S+ AC GL+
Sbjct: 793 FQ-------------------KARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA 833
Query: 206 VFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEM 263
+ + + G + C +I L + G + A M + ++W +L
Sbjct: 834 YYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIH 893
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYN---QSGYPEEAFRLFRQMTRYSFKPNTSC 318
G+L AR+ + + E + S + N SG E+ L ++M + K +C
Sbjct: 894 GNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPAC 951
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 307/545 (56%), Gaps = 35/545 (6%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
LK + L +P+ +S++ AC LG V + F + + N LI +
Sbjct: 48 LKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHM 107
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K G + A+ +FD + ++D+ SW ++ + +G + +AR++FDEMP R+ SW+ +I
Sbjct: 108 YAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVI 167
Query: 289 ARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
+ Y G+ EA LFR M S N S L+A A++ +LR G +H ++++ G+
Sbjct: 168 SGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGL 227
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E D + AL+DLY G G + EA+ +
Sbjct: 228 ELDEVVWTALLDLY----------------------------------GKCGSLNEARGI 253
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD M ++ VSW+ +I E + F++F +++ SG PN+ TF+ VL A A +A+
Sbjct: 254 FDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAE 313
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+ GK++HG + ++G+ F +AL Y+K G+ E++RRVF++MP + +SWT ++ G
Sbjct: 314 QMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGY 373
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++G ++ FE + ++ P+E+T + VL AC+H+GLVD GL+YF+S++ + +
Sbjct: 374 AQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHT 433
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CV+D+L+RSGR EAE+ I++MP +PD WASLL GC+ + N ++AERA K L+
Sbjct: 434 ADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALF 493
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L E+PA Y+ LSNIYA+AG W + VR M +G+ K G SW+E++ QVH F
Sbjct: 494 ELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGD 553
Query: 708 DHNPK 712
+PK
Sbjct: 554 TSHPK 558
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 233/511 (45%), Gaps = 75/511 (14%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V+ N +I+ + G+L +AQ LFD +P+++ SW +ISG+ GR+E++ F+ P
Sbjct: 98 IVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPH 157
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEINDFRLGLS 205
++ SW A I G+V G+ EAL LF + E+ N T SS A A I+ R G
Sbjct: 158 RDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKE 217
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + ++G E V +L+ L K G ++ AR +FD+M +D+VSWT
Sbjct: 218 IHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWT----------- 266
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
MI R + G +E F LFR + +PN F+ VL+A
Sbjct: 267 --------------------TMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNA 306
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L A + G VH ++ ++G + F ++AL+ +YSKCG T+ R VF+ + D +
Sbjct: 307 CADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPD---L 363
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW S+I GY NGQ D+ F +L S
Sbjct: 364 VSWTSLIVGYAQNGQP-------------------------------DMALQFFESLLRS 392
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G P++ TF VL A ++ G + H K G + + D A+SG +
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKE 452
Query: 505 SRRVFDRMPDK-NEISWTVMVRGLAESG---YAKESINLFEEMEKTSITPNELTILSVLF 560
+ + D MP K ++ W ++ G G A+ + E+E + P LS ++
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPEN--PATYITLSNIY 510
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
A ++GL + K N M+ +K G+ +
Sbjct: 511 A--NAGLWTEETKVRNDMDNRGIVKKPGKSW 539
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+++EA + +P+ + +S +I+ L H++ +L V S IP + ++
Sbjct: 47 RLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIH 106
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A SL + L +I + D+ + YA G IE +R++FD MP ++ S
Sbjct: 107 MYAKCGSLVDAQMLFDEIPQ----KDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFS 162
Query: 520 WTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W ++ G G+ E+++LF M E S N T+ S L A + + +G K +
Sbjct: 163 WNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRG-KEIHGY 221
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
++ + +T ++D+ + G L+EA + M + D +W +++ C
Sbjct: 222 LIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMA-DKDIVSWTTMIHRC 272
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 322/615 (52%), Gaps = 69/615 (11%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
+I + G+ A++LFD +P+ + + + LIS HG
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHG-------------------- 143
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
S EA+K++ L E G+KP+ F + KACA D V +
Sbjct: 144 -----------LSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATR 192
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
G V V N+LI K V+ ARR+
Sbjct: 193 CGVMSDVFVGNALIHAYGKCKCVE-------------------------------GARRV 221
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
FD++ R+ VSW+ + + Y + G+P + +FR+M KPN S +L A A LK L
Sbjct: 222 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 281
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
+SG +H ++ G+ ++F+ +AL+ LY+KC ++ R+VFD + +DV VSWN ++
Sbjct: 282 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDV---VSWNGVL 338
Query: 393 GGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
Y N + E+ LF M + ++ +W+A+I G +E+ + + +F +M G
Sbjct: 339 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFK 398
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN+ T SS+L A + +L GK++H + + D+ TAL YAK GD+ SR V
Sbjct: 399 PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNV 458
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M K+ ++W M+ A G KE++ LF++M + + PN +T VL CSHS LV
Sbjct: 459 FDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLV 518
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G++ FNSM + ++P+ HY+CVVD+ SR+GRL+EA FI MP EP ++AW +LL+
Sbjct: 519 EEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLA 578
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ YKN ++A+ + K L+++ +P YV L NI +A W +A VR LM E+G+ K+
Sbjct: 579 ACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKT 638
Query: 689 GGCSWVEVRNQVHFF 703
GCSW++V N+VH F
Sbjct: 639 PGCSWLQVGNKVHTF 653
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 242/517 (46%), Gaps = 64/517 (12%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R LF P+ TC L+ +T+ L + ++ L + GI + +
Sbjct: 118 RQLFDNIPQPD----PTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKA 173
Query: 66 YLGSRKSLEANEIVKDLNGF----DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
S +L E+ D D+ V N +I+A + +E A+R+FD + R+ VSW
Sbjct: 174 CAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSW 233
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+L S ++K CGF + G + +F ++ SGVK
Sbjct: 234 TSLSSCYVK--------------------------CGFPRKG-----MDVFREMGWSGVK 262
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN +T SSI ACAE+ D + G + G + G ++ VC++L++L K V AR V
Sbjct: 263 PNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMV 322
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYP 297
FD M RDVVSW +L + + + + +F +M +E +W+ +I ++G
Sbjct: 323 FDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRS 382
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEA +FR+M + FKPN S +L A + + LR G +H +V + D+ + AL
Sbjct: 383 EEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTAL 442
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PK 413
+ +Y+KCG+ R VFD + KD VV+WN+MI ++G +EA LFD M +
Sbjct: 443 LYMYAKCGDLNLSRNVFDMMRRKD---VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQ 499
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKD 472
N V+++ ++SG + + +FN M + P+ + +S V+ D
Sbjct: 500 PNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVV-------------D 546
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
++ + +L Y G + T + G + ++ RV+
Sbjct: 547 IYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVY 583
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
LG L GD +R++FD +P + + + ++ L G + E+I ++ +++
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159
Query: 548 ITPNELTILSVLFACSHSG 566
I P+ L+ AC+ SG
Sbjct: 160 IKPDMPVFLAAAKACAVSG 178
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/443 (40%), Positives = 264/443 (59%), Gaps = 5/443 (1%)
Query: 272 IFDEMPERNEV-SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+F++ ++ V SW+ +IA +SG EA R F M + S KPN S F + + ++L
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
L SG H L G E D+F+S+AL+D+YSKCGE +D R +FD I +++ VSW S
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNI---VSWTS 147
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP- 449
MI GY N A +FD M +R+ +SW++II+ Y ++ +F+ M+ GEI
Sbjct: 148 MITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 207
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
N T S+VL A A S GK +H ++IK+G +VF+GT++ D Y K G +E +R+ F
Sbjct: 208 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAF 267
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
DRM +KN SW+ MV G G+AKE++ +F EM + PN +T +SVL ACSH+GL++
Sbjct: 268 DRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE 327
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+G +F +M ++++P HY C+VD+L R+G L EA D I M PD W +LL
Sbjct: 328 EGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ +KN + E + + L++L ++ YVLLSNIYA AGRW D +R LM GL K
Sbjct: 388 CRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPP 447
Query: 690 GCSWVEVRNQVHFFFQKTDHNPK 712
G S V+++ +VH F +P+
Sbjct: 448 GFSLVDIKGRVHVFLVGDREHPQ 470
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 217/463 (46%), Gaps = 72/463 (15%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV SW + I ++G S EAL+ F + + +KPN TF K+C+ + D G
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
GFE + V ++L+ + K GE+ AR++FD + R++VSWT ++ +++ D
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSAL 326
A R+FD M ER+ +SW+ +IA Y Q+G E+ +F +M + N S VL A
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A + R G +H V+K+G+E +VF+ ++ID+Y KCG+ + R FD + EK+V
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK--- 276
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SW++M+ GYG++G +EA E VF EM ++G
Sbjct: 277 SWSAMVAGYGMHGHAKEALE-------------------------------VFYEMNMAG 305
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN TF SVL A + LE+G ++
Sbjct: 306 VKPNYITFVSVLAACSHAGLLEEGWHW----------------------------FKAMS 337
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
FD P + MV L +GY KE+ +L + M+ + P+ + ++L AC
Sbjct: 338 HEFDVEPGVEH--YGCMVDLLGRAGYLKEAFDLIKGMK---LRPDFVVWGALLGACRMHK 392
Query: 567 LVDKGLKYFNSMEPIYNIKP-NGRHYTCVVDMLSRSGRLSEAE 608
VD G S ++ + P N +Y + ++ + +GR + E
Sbjct: 393 NVDLGEI---SARKLFELDPKNCGYYVLLSNIYADAGRWEDVE 432
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 164/335 (48%), Gaps = 41/335 (12%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL V + +++ + G L +A+ LFD + RN VSWT++I+G++++ ++ F+
Sbjct: 110 DLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMA 169
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGL 204
++VISW + I + QNG S E++++F ++++ G + N VT S++ ACA RLG
Sbjct: 170 ERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGK 229
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + K G E +V V S+I + K G+V++AR FDRM +++V SW
Sbjct: 230 CIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW----------- 278
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
S M+A Y G+ +EA +F +M KPN F VL+
Sbjct: 279 --------------------SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLA 318
Query: 325 ALASLKALRSGMH-VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV- 382
A + L G H A + +E V ++DL + G K+ FD I +
Sbjct: 319 ACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEA---FDLIKGMKLR 375
Query: 383 AHVVSWNSMIGGYGLNGQME----EAKELFDNMPK 413
V W +++G ++ ++ A++LF+ PK
Sbjct: 376 PDFVVWGALLGACRMHKNVDLGEISARKLFELDPK 410
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/569 (34%), Positives = 300/569 (52%), Gaps = 38/569 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N+ W I +L LF ++L SG+ PN TF S+ K+CA+ +
Sbjct: 91 NIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLH 150
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
K H V SLI + ++GE+ AR VFD+ RD VS+T ++ ++ G +
Sbjct: 151 AHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVD 210
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+ARR+FDE+P ++ VSW+ MIA Y QSG EEA F +M PN S VLSA
Sbjct: 211 DARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACG 270
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L++L G + + V G K++ + NAL+D+YSKCGE
Sbjct: 271 HLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGE--------------------- 309
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
IG A++LFD M ++ + W+ +I GY ++ +F ML
Sbjct: 310 ----IG---------TARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENV 356
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIK----LGFPYDVFLGTALTDTYAKSGDIE 503
PN TF +VL A AS+ +L+ GK +H I K G +V L T++ YAK G +E
Sbjct: 357 TPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVE 416
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ +VF M ++ SW M+ GLA +G+A+ ++ LFEEM P+++T + VL AC+
Sbjct: 417 VAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACT 476
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
+G V+ G +YF+SM Y I P +HY C++D+L+RSG+ EA+ + +M EPD W
Sbjct: 477 QAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIW 536
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
SLL+ C+ + + E + L++L E+ YVLLSNIYA AGRW D +R + +K
Sbjct: 537 GSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDK 596
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G++K GC+ +E+ VH F +P+
Sbjct: 597 GMKKVPGCTSIEIDGVVHEFLVGDKFHPQ 625
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 192/424 (45%), Gaps = 73/424 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L K + + LH H +K +H ++ T L+ MY
Sbjct: 133 LFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMY-------------------- 172
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
Q G L A+ +FD R+ VS+TALI+G++ G V+++ F+ P
Sbjct: 173 -----------SQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW A I G+VQ+G EAL F ++ E+ V PN+ T S+ AC + LG +
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ GF K++ + N+L+ + K GE+ AR +FD ME +DV+ W
Sbjct: 282 GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILW------------- 328
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ MI Y EEA LF M R + PN F VL A
Sbjct: 329 ------------------NTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPAC 370
Query: 327 ASLKALRSGMHVHAHVLK----IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
ASL AL G VHA++ K G +V + ++I +Y+KCG + VF S+ + +
Sbjct: 371 ASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSL 430
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAV 438
A SWN+MI G +NG E A LF+ M + +D+++ ++S + +L
Sbjct: 431 A---SWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRY 487
Query: 439 FNEM 442
F+ M
Sbjct: 488 FSSM 491
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 8/217 (3%)
Query: 112 GMPERNEVS-WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALK 170
G N VS WT++I + K G VE + F +++ SW A I G NG + AL
Sbjct: 392 GTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALG 451
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLS 229
LF +++ G +P+++TF + AC + LG F + K G + +I L
Sbjct: 452 LFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLL 511
Query: 230 LKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMG--DLGE--ARRIFDEMPERNEVSW 284
+ G+ D A+ + ME + D W +L+ G + GE A R+F+ PE N ++
Sbjct: 512 ARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPE-NSGAY 570
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
++ Y +G ++ ++ ++ K C SI
Sbjct: 571 VLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSI 607
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 322/615 (52%), Gaps = 69/615 (11%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
+I + G+ A++LFD +P+ + + + LIS HG
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHG-------------------- 57
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
S EA+K++ L E G+KP+ F + KACA D V +
Sbjct: 58 -----------LSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATR 106
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
G V V N+LI K V+ ARR+
Sbjct: 107 CGVMSDVFVGNALIHAYGKCKCVE-------------------------------GARRV 135
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
FD++ R+ VSW+ + + Y + G+P + +FR+M KPN S +L A A LK L
Sbjct: 136 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 195
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
+SG +H ++ G+ ++F+ +AL+ LY+KC ++ R+VFD + +DV VSWN ++
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDV---VSWNGVL 252
Query: 393 GGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
Y N + E+ LF M + ++ +W+A+I G +E+ + + +F +M G
Sbjct: 253 TAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFK 312
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN+ T SS+L A + +L GK++H + + D+ TAL YAK GD+ SR V
Sbjct: 313 PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNV 372
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M K+ ++W M+ A G KE++ LF++M + + PN +T VL CSHS LV
Sbjct: 373 FDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLV 432
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G++ FNSM + ++P+ HY+CVVD+ SR+GRL+EA FI MP EP ++AW +LL+
Sbjct: 433 EEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLA 492
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ YKN ++A+ + K L+++ +P YV L NI +A W +A VR LM E+G+ K+
Sbjct: 493 ACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKT 552
Query: 689 GGCSWVEVRNQVHFF 703
GCSW++V N+VH F
Sbjct: 553 PGCSWLQVGNKVHTF 567
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 242/517 (46%), Gaps = 64/517 (12%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R LF P+ TC L+ +T+ L + ++ L + GI + +
Sbjct: 32 RQLFDNIPQPD----PTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKA 87
Query: 66 YLGSRKSLEANEIVKDLNGF----DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
S +L E+ D D+ V N +I+A + +E A+R+FD + R+ VSW
Sbjct: 88 CAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSW 147
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+L S ++K CGF + G + +F ++ SGVK
Sbjct: 148 TSLSSCYVK--------------------------CGFPRKG-----MDVFREMGWSGVK 176
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN +T SSI ACAE+ D + G + G + G ++ VC++L++L K V AR V
Sbjct: 177 PNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMV 236
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYP 297
FD M RDVVSW +L + + + + +F +M +E +W+ +I ++G
Sbjct: 237 FDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRS 296
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEA +FR+M + FKPN S +L A + + LR G +H +V + D+ + AL
Sbjct: 297 EEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTAL 356
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PK 413
+ +Y+KCG+ R VFD + KD VV+WN+MI ++G +EA LFD M +
Sbjct: 357 LYMYAKCGDLNLSRNVFDMMRRKD---VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQ 413
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKD 472
N V+++ ++SG + + +FN M + P+ + +S V+ D
Sbjct: 414 PNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVV-------------D 460
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
++ + +L Y G + T + G + ++ RV+
Sbjct: 461 IYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVY 497
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
LG L GD +R++FD +P + + + ++ L G + E+I ++ +++
Sbjct: 14 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73
Query: 548 ITPNELTILSVLFACSHSG 566
I P+ L+ AC+ SG
Sbjct: 74 IKPDMPVFLAAAKACAVSG 92
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 317/596 (53%), Gaps = 65/596 (10%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+ V TA++ + K + ++ F P V + A + G V+ G EA+ LF ++
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
S ++ + V+ S + ACAE + G V L K+GF+ + V N+
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA------------ 391
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
+LD++ + L EA IF M +++ VSW+ +IA Q+G+
Sbjct: 392 -------------------VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 432
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
++ F +M R+ KP+ + VL A A+L++L G+ VH V+K G+ D F+++
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 492
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
++D+Y KCG ++EA++L D + +
Sbjct: 493 VVDMYCKCG----------------------------------IIDEAQKLHDRIGGQQV 518
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSW+AI+SG+ +K+ + F+EML G P+ TF++VL A++A++E GK +HG+
Sbjct: 519 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 578
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
IIK D ++ + L D YAK GD+ S VF+++ ++ +SW M+ G A G E+
Sbjct: 579 IIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEA 638
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ +FE M+K ++ PN T ++VL ACSH GL D G +YF+ M Y ++P H+ C+VD
Sbjct: 639 LRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVD 698
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L RS EA FINSMPF+ D+ W +LLS CK ++ +IAE A N+ L + +
Sbjct: 699 ILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSV 758
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y+LLSN+YA +G+W D R+L+ + L+K GCSW+EV++++H F +P+
Sbjct: 759 YILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 814
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 222/457 (48%), Gaps = 48/457 (10%)
Query: 180 VKPNEVTFSSICKACAEIN--DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
V P VTFS + ++CA+ G + + +GF + V N L+ + +
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAAC 70
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR VFD M +RD VSW +L + GD+ A +FD MP+ + VSW+ +++ Y Q G
Sbjct: 71 ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 130
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+E+ LF +M R P+ + F+++L + ++L+ L G+ VHA +K G+E DV +AL
Sbjct: 131 QESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSAL 190
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+Y KC D F YG MP+RN V
Sbjct: 191 VDMYGKCRSLDDALCFF--------------------YG--------------MPERNWV 216
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW A I+G ++++Q+ +F EM G ++ +++S + A+++ L G+ LH
Sbjct: 217 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F D +GTA+ D YAK+ + +RR F +P+ + M+ GL +G E++
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME-PIYNIKPNGRHYTC--- 593
LF+ M ++SI + +++ V AC+ + KG YF + IK C
Sbjct: 337 GLFQFMIRSSIRFDVVSLSGVFSACAET----KG--YFQGQQVHCLAIKSGFDVDICVNN 390
Query: 594 -VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
V+D+ + L EA M + DS +W ++++
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 426
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 242/553 (43%), Gaps = 67/553 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ + A+R+FD MP R+ VSW +++ + G + ++ F+ P +
Sbjct: 54 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW A + G+ Q G E++ LF+++ GV P+ TF+ + K+C+ + + LG+ V
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L K G E V ++L+ + K +D A F M +R+ W
Sbjct: 174 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN---W--------------- 215
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
VSW IA Q+ LF +M R + ++ + A+
Sbjct: 216 -------------VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAA 262
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ L +G +HAH +K D + A++D+Y+K D R F + V +
Sbjct: 263 MSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE---TS 319
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+M+ G G EA LF M + S+I +FD+V
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIR------SSI--------RFDVV------------- 352
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ S V A A +G+ +H IK GF D+ + A+ D Y K + + +
Sbjct: 353 ----SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F M K+ +SW ++ L ++G+ ++I F EM + + P++ T SVL AC+ +
Sbjct: 409 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 468
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ GL + + + + + VVDM + G + EA+ + + + +W ++LS
Sbjct: 469 EYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILS 526
Query: 629 GCKTYKNEQIAER 641
G K + A++
Sbjct: 527 GFSLNKESEEAQK 539
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 222/494 (44%), Gaps = 66/494 (13%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+ D F +++ +C + G A + G+ E + + +AL+ + K ++++
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGL-EIDVRTGSALVDMYGKCRSLDDA 203
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+ +F P +N +SW AAI G VQN L+LF+++ G+ ++ +++S ++CA +
Sbjct: 204 LCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAM 263
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+ G + K F D V T I+
Sbjct: 264 SCLNTGRQLHAHAIKNKFSS-------------------------------DRVVGTAIV 292
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
DV+ + L +ARR F +P + + M+ ++G EA LF+ M R S + +
Sbjct: 293 DVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVV 352
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
S V SA A K G VH +K G + D+ ++NA++DLY KC + L+F +
Sbjct: 353 SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM 412
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+KD VSWN++I NG +D
Sbjct: 413 KQKD---SVSWNAIIAALEQNG-------------------------------HYDDTIL 438
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
FNEML G P+ T+ SVL A A++ SLE G +H K+IK G D F+ + + D Y
Sbjct: 439 HFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYC 498
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G I+ ++++ DR+ + +SW ++ G + + ++E+ F EM + P+ T +
Sbjct: 499 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 558
Query: 558 VLFACSHSGLVDKG 571
VL C++ ++ G
Sbjct: 559 VLDTCANLATIELG 572
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 193/470 (41%), Gaps = 104/470 (22%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH H IK +R + T ++ +Y + +A L + N M+ ++
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 100 WGNLEEAQRLFD-------------------------GMPERNEVSWTALISGF------ 128
G EA LF G + +V A+ SGF
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 129 --------MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
K + E+ F+ ++ +SW A I QNG + + F ++L G+
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP++ T+ S+ KACA + GL V + K+G V ++++ + K G +D A+
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 508
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ DR+ + VVSW IL F N+ S EEA
Sbjct: 509 LHDRIGGQQVVSWNAILSGF-----------------SLNKES--------------EEA 537
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+ F +M KP+ F+ VL A+L + G +H ++K + D +IS+ L+D+
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG+ D LVF+ + ++D VSWN+MI GY L+G EA +F+ M K N V
Sbjct: 598 YAKCGDMPDSLLVFEKVEKRD---FVSWNAMICGYALHGLGVEALRMFERMQKENVV--- 651
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
PN +TF +VL A + V + G
Sbjct: 652 ----------------------------PNHATFVAVLRACSHVGLFDDG 673
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 142/308 (46%), Gaps = 22/308 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
KD S N +I +GH T +H L R ++ ++ + V
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEML-----------RFGMKPDDFT-----YGSV 458
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ C ++++G + + + G+ V+ T ++ + K G ++E+ +R Q
Sbjct: 459 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST-VVDMYCKCGIIDEAQKLHDRIGGQQ 517
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW A + GF N S EA K F ++L+ G+KP+ TF+++ CA + LG + G
Sbjct: 518 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 577
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I K + ++L+ + K G++ + VF+++EKRD VSW ++ + G E
Sbjct: 578 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 637
Query: 269 ARRIFDEMPERNEV----SWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVL 323
A R+F+ M + N V ++ ++ + G ++ R F M T Y +P F+ ++
Sbjct: 638 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 324 SALASLKA 331
L K
Sbjct: 698 DILGRSKG 705
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 317/596 (53%), Gaps = 65/596 (10%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+ V TA++ + K + ++ F P V + A + G V+ G EA+ LF ++
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
S ++ + V+ S + ACAE + G V L K+GF+ + V N+
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA------------ 391
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
+LD++ + L EA IF M +++ VSW+ +IA Q+G+
Sbjct: 392 -------------------VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 432
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
++ F +M R+ KP+ + VL A A+L++L G+ VH V+K G+ D F+++
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 492
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
++D+Y KCG ++EA++L D + +
Sbjct: 493 VVDMYCKCG----------------------------------IIDEAQKLHDRIGGQQV 518
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSW+AI+SG+ +K+ + F+EML G P+ TF++VL A++A++E GK +HG+
Sbjct: 519 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 578
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
IIK D ++ + L D YAK GD+ S VF+++ ++ +SW M+ G A G E+
Sbjct: 579 IIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEA 638
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ +FE M+K ++ PN T ++VL ACSH GL D G +YF+ M Y ++P H+ C+VD
Sbjct: 639 LRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVD 698
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L RS EA FINSMPF+ D+ W +LLS CK ++ +IAE A N+ L + +
Sbjct: 699 ILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSV 758
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y+LLSN+YA +G+W D R+L+ + L+K GCSW+EV++++H F +P+
Sbjct: 759 YILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 814
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 221/457 (48%), Gaps = 48/457 (10%)
Query: 180 VKPNEVTFSSICKACAEIN--DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
V P VTFS + ++CA+ G + + +GF V N L+ + +
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAAC 70
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR VFD M +RD VSW +L + GD+ A +FD MP+ + VSW+ +++ Y Q G
Sbjct: 71 ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 130
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+E+ LF +M R P+ + F+++L + ++L+ L G+ VHA +K G+E DV +AL
Sbjct: 131 QESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSAL 190
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+Y KC D F YG MP+RN V
Sbjct: 191 VDMYGKCRSLDDALCFF--------------------YG--------------MPERNWV 216
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW A I+G ++++Q+ +F EM G ++ +++S + A+++ L G+ LH
Sbjct: 217 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F D +GTA+ D YAK+ + +RR F +P+ + M+ GL +G E++
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 336
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME-PIYNIKPNGRHYTC--- 593
LF+ M ++SI + +++ V AC+ + KG YF + IK C
Sbjct: 337 GLFQFMIRSSIRFDVVSLSGVFSACAET----KG--YFQGQQVHCLAIKSGFDVDICVNN 390
Query: 594 -VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
V+D+ + L EA M + DS +W ++++
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 426
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 242/553 (43%), Gaps = 67/553 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ + A+R+FD MP R+ VSW +++ + G + ++ F+ P +
Sbjct: 54 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW A + G+ Q G E++ LF+++ GV P+ TF+ + K+C+ + + LG+ V
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L K G E V ++L+ + K +D A F M +R+ W
Sbjct: 174 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN---W--------------- 215
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
VSW IA Q+ LF +M R + ++ + A+
Sbjct: 216 -------------VSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAA 262
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ L +G +HAH +K D + A++D+Y+K D R F + V +
Sbjct: 263 MSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE---TS 319
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+M+ G G EA LF M + S+I +FD+V
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIR------SSI--------RFDVV------------- 352
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ S V A A +G+ +H IK GF D+ + A+ D Y K + + +
Sbjct: 353 ----SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F M K+ +SW ++ L ++G+ ++I F EM + + P++ T SVL AC+ +
Sbjct: 409 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 468
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ GL + + + + + VVDM + G + EA+ + + + +W ++LS
Sbjct: 469 EYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILS 526
Query: 629 GCKTYKNEQIAER 641
G K + A++
Sbjct: 527 GFSLNKESEEAQK 539
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 222/494 (44%), Gaps = 66/494 (13%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+ D F +++ +C + G A + G+ E + + +AL+ + K ++++
Sbjct: 145 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGL-EIDVRTGSALVDMYGKCRSLDDA 203
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+ +F P +N +SW AAI G VQN L+LF+++ G+ ++ +++S ++CA +
Sbjct: 204 LCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAM 263
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+ G + K F D V T I+
Sbjct: 264 SCLNTGRQLHAHAIKNKFSS-------------------------------DRVVGTAIV 292
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
DV+ + L +ARR F +P + + M+ ++G EA LF+ M R S + +
Sbjct: 293 DVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVV 352
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
S V SA A K G VH +K G + D+ ++NA++DLY KC + L+F +
Sbjct: 353 SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM 412
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+KD VSWN++I NG +D
Sbjct: 413 KQKD---SVSWNAIIAALEQNG-------------------------------HYDDTIL 438
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
FNEML G P+ T+ SVL A A++ SLE G +H K+IK G D F+ + + D Y
Sbjct: 439 HFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYC 498
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G I+ ++++ DR+ + +SW ++ G + + ++E+ F EM + P+ T +
Sbjct: 499 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 558
Query: 558 VLFACSHSGLVDKG 571
VL C++ ++ G
Sbjct: 559 VLDTCANLATIELG 572
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 193/470 (41%), Gaps = 104/470 (22%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH H IK +R + T ++ +Y + +A L + N M+ ++
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 100 WGNLEEAQRLFD-------------------------GMPERNEVSWTALISGF------ 128
G EA LF G + +V A+ SGF
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 129 --------MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
K + E+ F+ ++ +SW A I QNG + + F ++L G+
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP++ T+ S+ KACA + GL V + K+G V ++++ + K G +D A+
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 508
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ DR+ + VVSW IL F N+ S EEA
Sbjct: 509 LHDRIGGQQVVSWNAILSGF-----------------SLNKES--------------EEA 537
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+ F +M KP+ F+ VL A+L + G +H ++K + D +IS+ L+D+
Sbjct: 538 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 597
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG+ D LVF+ + ++D VSWN+MI GY L+G EA +F+ M K N V
Sbjct: 598 YAKCGDMPDSLLVFEKVEKRD---FVSWNAMICGYALHGLGVEALRMFERMQKENVV--- 651
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
PN +TF +VL A + V + G
Sbjct: 652 ----------------------------PNHATFVAVLRACSHVGLFDDG 673
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 142/308 (46%), Gaps = 22/308 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
KD S N +I +GH T +H L R ++ ++ + V
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEML-----------RFGMKPDDFT-----YGSV 458
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ C ++++G + + + G+ V+ T ++ + K G ++E+ +R Q
Sbjct: 459 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST-VVDMYCKCGIIDEAQKLHDRIGGQQ 517
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW A + GF N S EA K F ++L+ G+KP+ TF+++ CA + LG + G
Sbjct: 518 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 577
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I K + ++L+ + K G++ + VF+++EKRD VSW ++ + G E
Sbjct: 578 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 637
Query: 269 ARRIFDEMPERNEV----SWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVL 323
A R+F+ M + N V ++ ++ + G ++ R F M T Y +P F+ ++
Sbjct: 638 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 324 SALASLKA 331
L K
Sbjct: 698 DILGRSKG 705
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 306/547 (55%), Gaps = 38/547 (6%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA++L L + +P+ +S++ AC LG V + F V + N L+
Sbjct: 73 EAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLL 129
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ K G + A+ +FD M RD+ SW ++ + ++G L +AR++FDEMP+R+ SW+
Sbjct: 130 DMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNA 189
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
I+ Y P EA LFR M R+ N S L+A A++ LR G +H ++++
Sbjct: 190 AISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRT 249
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
+ D + +AL+DL YG G ++EA+
Sbjct: 250 ELNLDEVVWSALLDL----------------------------------YGKCGSLDEAR 275
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
+FD M R+ VSW+ +I E + + F +F +++ SG PN+ TF+ VL A A A
Sbjct: 276 GIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHA 335
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+ GK++HG ++ G+ F +AL Y+K G+ +RRVF+ M + +SWT ++
Sbjct: 336 AEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIV 395
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
G A++G E+++ FE + ++ P+++T + VL AC+H+GLVDKGL+YF+S++ + +
Sbjct: 396 GYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 455
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
HY CV+D+L+RSGR EAE+ I++MP +PD WASLL GC+ + N ++A+RA K
Sbjct: 456 HTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKA 515
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
L+++ E+PA Y+ L+NIYA+AG W + NVRK M G+ K G SW+E++ QVH F
Sbjct: 516 LYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLV 575
Query: 706 KTDHNPK 712
+PK
Sbjct: 576 GDTSHPK 582
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 220/482 (45%), Gaps = 75/482 (15%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ + N +++ + G+L +AQ LFD M R+ SW +I G+ K GR+E++ F+ P
Sbjct: 122 VFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQ 181
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK--PNEVTFSSICKACAEINDFRLGL 204
++ SW AAI G+V + EAL+LF ++++ + N+ T SS A A I RLG
Sbjct: 182 RDNFSWNAAISGYVTHNQPREALELF-RVMQRHERSSSNKFTLSSALAASAAIPCLRLGK 240
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ G + + V ++L+ L K G +D AR +FD+M+ RDVVSWT
Sbjct: 241 EIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWT---------- 290
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
MI R + G EE F LFR + + +PN F+ VL+
Sbjct: 291 ---------------------TMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLN 329
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A A G VH +++ G + F +AL+ +YSKCG T+ R VF+ + + D
Sbjct: 330 ACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPD--- 386
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+VSW S+I GY NGQ +EA F+ +L
Sbjct: 387 LVSWTSLIVGYAQNGQPDEALHFFE-------------------------------LLLQ 415
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
SG P++ T+ VL A ++KG + H K G + + D A+SG +
Sbjct: 416 SGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFK 475
Query: 504 SSRRVFDRMPDK-NEISWTVMVRGLAESG---YAKESINLFEEMEKTSITPNELTILSVL 559
+ + D MP K ++ W ++ G G AK + E+E + P L+ +
Sbjct: 476 EAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPEN--PATYITLANI 533
Query: 560 FA 561
+A
Sbjct: 534 YA 535
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 312/545 (57%), Gaps = 36/545 (6%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L+ ++LL KP + ++ K C + + G V I +G + + N L+ +
Sbjct: 104 LREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDM 162
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K G + A VFD M RD+ SW +++ +++ G+ +AR +FD+MP R+ SW+ +I
Sbjct: 163 YAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAII 222
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSC-FSIVLSALASLKALRSGMHVHAHVLKIGI 347
+ Q PEEA L+R M ++ + + C S L+A A++ +L G +H H++++G+
Sbjct: 223 SGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGL 282
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ D V W S++ YG G +EEA+ +
Sbjct: 283 DSDE----------------------------------VVWCSLLDMYGKCGSIEEARYI 308
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD M +R+ VSW+ +I YL++ + + FA+F ++ S +PN TF+ VL A A +A+
Sbjct: 309 FDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAE 368
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+ GK +H ++++GF +AL Y+K GDIE+++ VF+ +P + SWT ++ G
Sbjct: 369 DLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGY 428
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A+ G ++++ FE + K+ P+ + + VL AC+H+GLVDKGL+YF+S++ + +
Sbjct: 429 AQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRT 488
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C++D+L+R+G+ +EAE IN MP +PD WA+LL GC+ + N ++A+RA K+L+
Sbjct: 489 IDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLF 548
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
++ E+PA YV L+NIYASAG + N+R+ M +G+ K G SW+E+R +VH F
Sbjct: 549 EIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGD 608
Query: 708 DHNPK 712
+ +PK
Sbjct: 609 NSHPK 613
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 231/512 (45%), Gaps = 104/512 (20%)
Query: 20 YIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV 79
Y L LLK Q + +G+ +H H IKT Y++ RLL MY
Sbjct: 118 YASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRLLDMY------------- 163
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ G+L +A+++FD M R+ SW +ISG++K G E++
Sbjct: 164 ------------------AKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARN 205
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEI 197
F++ P ++ SWTA I G VQ+ EAL+L+ +L++ K N+ T SS A A I
Sbjct: 206 LFDKMPNRDNFSWTAIISGCVQHNRPEEALELY-RLMQKHDYSKSNKCTISSALAASAAI 264
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+G + G I + G + D V W +L
Sbjct: 265 PSLHMGKKIHGHIMRMGLDS-------------------------------DEVVWCSLL 293
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
D++ + G + EAR IFD+M ER+ VSW+ MI Y ++G EE F LFR + + PN
Sbjct: 294 DMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDF 353
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
F+ VL+A A L A G +HA+++++G + ++AL+ +YSKCG+ ++ + VF+ +
Sbjct: 354 TFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEIL 413
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ D + SW S++ GY +GQ ++A F
Sbjct: 414 PQPD---LFSWTSLLVGYAQHGQHDKALHFF----------------------------- 441
Query: 438 VFNEMLL-SGEIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDT 495
E+LL SG P+ F VL A A ++KG + H K G + + D
Sbjct: 442 ---ELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDL 498
Query: 496 YAKSGDIESSRRVFDRMPDK-NEISWTVMVRG 526
A++G + + + MP K ++ W ++ G
Sbjct: 499 LARAGQFTEAESIINEMPIKPDKYIWAALLGG 530
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 147/304 (48%), Gaps = 38/304 (12%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
+ +EV W +L+ + K G +EE+ + F++ ++V+SWT I +++NG E LF
Sbjct: 283 DSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRH 342
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L+ S + PN+ TF+ + ACA++ LG + + + GF+ S ++L+ + K G+
Sbjct: 343 LMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGD 402
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
++ A+SVF+ + + D+ SWT +L Y Q
Sbjct: 403 IENAKSVFEILPQPDLFSWTSLL-------------------------------VGYAQH 431
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM-HVHAHVLKIGIEKDVFI 353
G ++A F + + KP+ F VLSA A + G+ + H+ K G+ + +
Sbjct: 432 GQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDH 491
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFD 409
+IDL ++ G+ + + + + K ++ W +++GG ++G +E AK LF+
Sbjct: 492 YACIIDLLARAGQFTEAESIINEMPIKPDKYI--WAALLGGCRIHGNLELAKRAAKSLFE 549
Query: 410 NMPK 413
P+
Sbjct: 550 IEPE 553
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 306/592 (51%), Gaps = 66/592 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T L+ + K G E++ F +++++W+A I VQ G+ EAL LF ++ +K
Sbjct: 368 TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMK 427
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN VT SI ACA+++ +LG S+ KA + +S +L+++ K G A +
Sbjct: 428 PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTT 487
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+R M R+ V+W+ +I Y Q G P A
Sbjct: 488 FNR-------------------------------MSSRDIVTWNSLINGYAQIGDPYNAI 516
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F ++ + P+ V+ A A L L G +H ++K+G E D + NALID+Y
Sbjct: 517 DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWS 420
+KCG + A+ LF+ +++V+W+
Sbjct: 577 AKCGS----------------------------------LPSAEFLFNKTDFTKDEVTWN 602
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
II+ Y+++ + F++M L PN TF SVL A+A +A+ +G H II++
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM 662
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF + +G +L D YAK G + S ++F+ M K+ +SW M+ G A G+ +I LF
Sbjct: 663 GFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALF 722
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
M+++ + + ++ +SVL AC H GLV++G K F+SM Y+IKP+ HY C+VD+L R
Sbjct: 723 SLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGR 782
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G E FI MP EPD+ W +LL C+ + N ++ E A+ +L KL +PA +V+L
Sbjct: 783 AGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVL 842
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
S+IYA +GRW DA R M + GL+K+ GCSWVE++N+VH F +P+
Sbjct: 843 SSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQ 894
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 244/525 (46%), Gaps = 71/525 (13%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
AQ + G + + T LI+ + + + + F+ P + I W + I + ++
Sbjct: 52 HAQIIVSGFKHHHSI--THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
EAL+++ ++E G++P++ TF+ + KAC + + G+ G I + G E+ V +
Sbjct: 110 YNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAG 169
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ + KMG++ AR VFD+M KRDVV +W
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVV-------------------------------AW 198
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ MIA +QS P EA FR M +P++ + + L + +H +V +
Sbjct: 199 NAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFR 258
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
V SN LIDLYSKCG+ R VFD +V++D VSW +M+ GY NG E
Sbjct: 259 RDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQD---DVSWGTMMAGYAHNGCFVEV 313
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
ELFD M L NK + S A+A
Sbjct: 314 LELFDKMK-------------------------------LGNVRINKVSAVSAFLAAAET 342
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
LEKGK++HG ++ D+ + T L YAK G+ E ++++F + ++ ++W+ ++
Sbjct: 343 IDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAII 402
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
L ++GY +E+++LF+EM+ + PN +T++S+L AC+ L+ G K + ++
Sbjct: 403 AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG-KSIHCFTVKADM 461
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ T +V M ++ G + A N M D W SL++G
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLING 505
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 167/664 (25%), Positives = 285/664 (42%), Gaps = 109/664 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK T + +G HG + + G+ ++ ++ L+ MY A E+ + D
Sbjct: 135 VLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRD 194
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISG--------------- 127
+V N MI Q + EA F M E + VS L G
Sbjct: 195 VVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHG 254
Query: 128 ------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
+ K G V+ + F++ Q+ +SW + G+ NG E L
Sbjct: 255 YVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVL 314
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
+LF K+ V+ N+V+ S A AE D G + G + + + V L+ +
Sbjct: 315 ELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY 374
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
K GE + +A+++F + R+ V+WS +IA
Sbjct: 375 AKCGETE-------------------------------KAKQLFWGLQGRDLVAWSAIIA 403
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Q+GYPEEA LF++M KPN +L A A L L+ G +H +K ++
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDS 463
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D+ AL+ +Y+KCG A F+
Sbjct: 464 DLSTGTALVSMYAKCGF----------------------------------FTAALTTFN 489
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M R+ V+W+++I+GY + +F ++ LS P+ T V+ A A + L++
Sbjct: 490 RMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLA 528
G +HG I+KLGF D + AL D YAK G + S+ +F++ K+E++W V++
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
++G+AKE+I+ F +M + PN +T +SVL A ++ +G+ + + + N
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM-GFLSNT 668
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
++DM ++ G+L +E N M + D+ +W ++LSG Y +RA+ L+
Sbjct: 669 LVGNSLIDMYAKCGQLXYSEKLFNEMDHK-DTVSWNAMLSG---YAVHGHGDRAIA-LFS 723
Query: 649 LAEE 652
L +E
Sbjct: 724 LMQE 727
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 156/616 (25%), Positives = 256/616 (41%), Gaps = 154/616 (25%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +HG ++ I + + T L++MY ++ +A ++ L G DLV + +I A +
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406
Query: 99 QWGNLEEAQRLFDGM------PERNEV--------------------------------- 119
Q G EEA LF M P R +
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+ TAL+S + K G ++ F R +++++W + I G+ Q G + A+ +F KL S
Sbjct: 467 TGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSA 526
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ P+ T + ACA +ND G + GLI K GFE V N+LI + K G + A
Sbjct: 527 INPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+F++ + ++EV+W+V+IA Y Q+G+ +E
Sbjct: 587 FLFNKTDF------------------------------TKDEVTWNVIIAAYMQNGHAKE 616
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A F QM +F PN+ F VL A A L A R GM HA ++++G + + N+LID
Sbjct: 617 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLID 676
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG+ +F+ + KD VSWN+M+ GY ++G + A LF M +
Sbjct: 677 MYAKCGQLXYSEKLFNEMDHKD---TVSWNAMLSGYAVHGHGDRAIALFSLMQE------ 727
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
Q D V +F SVL A +E+G
Sbjct: 728 --------SQVQIDSV-----------------SFVSVLSACRHXGLVEEG--------- 753
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAK 534
R++F M DK I + MV L +G
Sbjct: 754 --------------------------RKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787
Query: 535 ESINLFEEMEKTSITPNELTILSVLFAC---SHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
E++ + M + P+ ++L +C S+ L + L + +EP N H+
Sbjct: 788 ETLGFIKVM---PVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEP-----RNPAHF 839
Query: 592 TCVVDMLSRSGRLSEA 607
+ + ++SGR ++A
Sbjct: 840 VVLSSIYAQSGRWADA 855
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 138/272 (50%), Gaps = 8/272 (2%)
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
L S C + I+ H S +I Y L + + A+ +FD+ P + + W
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILW 97
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+++I Y KQ++ ++ M+ G P+K TF+ VL A +L++G HG+I +
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDR 157
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
G DVF+G L D Y+K GD++ +R VFD+MP ++ ++W M+ GL++S E+++
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 540 FEEMEKTSITPNELTILSVLFA-CSHSGL-VDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
F M+ + P+ +++L++ C S + + + + + + NG ++D+
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG-----LIDL 272
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
S+ G + A + M + D +W ++++G
Sbjct: 273 YSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 158/422 (37%), Gaps = 64/422 (15%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
L +INP+ + LL D+ QG +HG ++K G + ++ L+ MY
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLD------QGTCIHGLIVKLGFESDCHVKNALIDMY- 576
Query: 68 GSRKSLEANEIVKDLNGF--DLVVHNCMINANIQWGNLEEAQRLFDGM------PER--- 116
SL + E + + F D V N +I A +Q G+ +EA F M P
Sbjct: 577 AKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 636
Query: 117 ------------------------------NEVSWTALISGFMKHGRVEESMWYFERNPF 146
N + +LI + K G++ S F
Sbjct: 637 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDH 696
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++ +SW A + G+ +G A+ LF + ES V+ + V+F S+ AC G +
Sbjct: 697 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKI 756
Query: 207 F-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF---- 260
F + K + + ++ L + G D M + D W +L
Sbjct: 757 FHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHS 816
Query: 261 -IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+++G++ + ++ RN + V+ + Y QSG +A + +M K C
Sbjct: 817 NVKLGEVALDHLV--KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS 874
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ L + A R G H +E + N L++ K G D V ++ E
Sbjct: 875 WVELK--NKVHAFRVGDKSHPQ-----LESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEE 927
Query: 380 KD 381
+D
Sbjct: 928 ED 929
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 302/568 (53%), Gaps = 64/568 (11%)
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +N++SWTA I G QN EA++ F + G P + FSS +ACA + +G
Sbjct: 2 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 61
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ L K G + V ++L D++ + G
Sbjct: 62 QMHCLALKFGIGSELFVGSNL-------------------------------EDMYSKCG 90
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ +A ++F+EMP ++EVSW+ MI Y++ G EEA F++M + L
Sbjct: 91 AMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLG 150
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A +LKA + G VH+ V+K+G E D+F+ NAL D+YSK G+ + VF
Sbjct: 151 ACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF---------- 200
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
G++ + RN VS++ +I GY+E +Q + +VF E+
Sbjct: 201 -----------GIDSEC------------RNVVSYTCLIDGYVETEQIEKGLSVFVELRR 237
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G PN+ TFSS++ A A+ A+LE+G LH +++K+ F D F+ + L D Y K G +E
Sbjct: 238 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 297
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ + FD + D EI+W +V + G K++I +FE M + PN +T +S+L CSH
Sbjct: 298 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 357
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+GLV++GL YF SM+ Y + P HY+CV+D+L R+GRL EA++FIN MPFEP++ W
Sbjct: 358 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 417
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
S L C+ + ++++ + A + L KL ++ VLLSNIYA+ +W D +VR M +
Sbjct: 418 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 477
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K G SWV+V + H F + +P+
Sbjct: 478 VKKLPGYSWVDVGYKTHVFGAEDWSHPR 505
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 176/354 (49%), Gaps = 37/354 (10%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MP+RN VSW+ MI+ +Q+ EA R F M P FS + A ASL ++ G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H LK GI ++F+ + L D+YSKCG D VF+ + KD VSW +MI GY
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKD---EVSWTAMIDGY 117
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G+ EEA F +M+ ++
Sbjct: 118 SKIGEFEEA-------------------------------LLAFKKMIDEEVTIDQHVLC 146
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD- 514
S L A ++ + + G+ +H ++KLGF D+F+G ALTD Y+K+GD+ES+ VF +
Sbjct: 147 STLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC 206
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
+N +S+T ++ G E+ ++ +++F E+ + I PNE T S++ AC++ +++G +
Sbjct: 207 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQL 266
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ I N + + +VDM + G L +A + + +P AW SL+S
Sbjct: 267 HAQVMKI-NFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLVS 318
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 178/399 (44%), Gaps = 74/399 (18%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ K G + ++ FE P ++ +SWTA I G+ + G EAL F K+++ V ++
Sbjct: 86 YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 145
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD-RME 246
S AC + + G SV + K GFE + V N+L + K G+++ A +VF E
Sbjct: 146 CSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSE 205
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
R+VVS+T ++D ++E + E+ +F +
Sbjct: 206 CRNVVSYTCLIDGYVETEQI-------------------------------EKGLSVFVE 234
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
+ R +PN FS ++ A A+ AL G +HA V+KI ++D F+S+ L+D+Y KCG
Sbjct: 235 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 294
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ FD I + ++WNS++ +G +G ++A ++F+ M R
Sbjct: 295 LEQAIQAFDEIGDPT---EIAWNSLVSVFGQHGLGKDAIKIFERMVDR------------ 339
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
G PN TF S+L + +E+G D + K Y V
Sbjct: 340 -------------------GVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDK---TYGV 377
Query: 487 FLG----TALTDTYAKSGDIESSRRVFDRMP-DKNEISW 520
G + + D ++G ++ ++ +RMP + N W
Sbjct: 378 VPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 416
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
MP+RN VSW+A+ISG ++ +F F M + GE+P + FSS + A AS+ S+E G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K +H +K G ++F+G+ L D Y+K G + + +VF+ MP K+E+SWT M+ G ++
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGLVDKGLKY----- 574
G +E++ F++M +T ++ + S L AC HS +V G +
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 575 ------------FNSMEPIYNIKPNGRH---YTCVVDMLSRSGRLSEAEDF---INSMPF 616
S ++ I R+ YTC++D + ++ + +
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA-EEHPAGYVLLSNIYASAG 668
EP+ ++SL+ C + + + K+ +E P +L ++Y G
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCG 293
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 153/374 (40%), Gaps = 52/374 (13%)
Query: 5 LRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
+R + + +F+S I C S + G+ +H +K GI E ++ + L
Sbjct: 32 MRICGEVPTQFAFSSAIRAC-------ASLGSIEMGKQMHCLALKFGIGSELFVGSNLED 84
Query: 65 MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP---------- 114
MY +A ++ +++ D V MI+ + G EEA F M
Sbjct: 85 MYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHV 144
Query: 115 -----------------------------ERNEVSWTALISGFMKHGRVEESMWYFE-RN 144
E + AL + K G +E + F +
Sbjct: 145 LCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 204
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+NV+S+T I G+V+ + L +F++L G++PNE TFSS+ KACA G
Sbjct: 205 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 264
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + K F++ V + L+ + K G ++ A FD + ++W ++ VF + G
Sbjct: 265 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHG 324
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
+A +IF+ M +R N +++ ++ + +G EE F M + Y P +
Sbjct: 325 LGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY 384
Query: 320 SIVLSALASLKALR 333
S V+ L L+
Sbjct: 385 SCVIDLLGRAGRLK 398
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 206/690 (29%), Positives = 348/690 (50%), Gaps = 100/690 (14%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++N + G + +A++LFD MP+++E SW +IS ++ GR+ E+ F+ ++ I
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+W++ I G+ + G EA LF + G K ++ T S+ + C+ + + G + G +
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K GFE +V V L+ + K V A +F +E
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE------------------------ 224
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
FD +N V W+ M+ Y Q+G +A FR M + N F +L+A +S+
Sbjct: 225 --FD---RKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVL 279
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
A G VH ++K G +V++ +AL+D+Y+KCG+ K+ + + +++ + D VVSWNS
Sbjct: 280 ARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDD---VVSWNS 336
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRN----DVSW--------------------------- 419
++ G+ +G EEA LF NM RN D ++
Sbjct: 337 LMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFE 396
Query: 420 ------SAIISGYLEHKQFDLVFAVFNEML------------------------------ 443
+A++ Y + D + VF +ML
Sbjct: 397 NYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDM 456
Query: 444 -LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
++G P++ +S+L A A + LE GK +H IK G + + +L YAK G +
Sbjct: 457 RVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCL 516
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ + +F M K+ I+WT ++ G A++G + S+ ++ M + P+ +T + +LFAC
Sbjct: 517 DDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFAC 576
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH+GLVD+G KYF M +Y IKP HY C++D+ RSG+L EA+ ++ M +PD+
Sbjct: 577 SHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATV 636
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W SLLS C+ ++N ++AERA NL++L + YV+LSN+Y+++ +W D +RKLM
Sbjct: 637 WKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKS 696
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
KG+ K GCSW+E+ ++V+ F +P+
Sbjct: 697 KGIVKEPGCSWLEINSRVNTFISDDRGHPR 726
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 143/594 (24%), Positives = 251/594 (42%), Gaps = 137/594 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ +S L+ G +HG ++K G ++ T L+ MY + EA + K L FD
Sbjct: 168 VLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE-FD 226
Query: 87 LVVH---NCMINANIQWGNLEEAQRLFDGMP----ERNEVSW------------------ 121
H M+ Q G+ +A F M E N+ ++
Sbjct: 227 RKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQ 286
Query: 122 -----------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
+AL+ + K G ++ + E +V+SW + + GFV++G
Sbjct: 287 VHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGL 346
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKAC--AEINDFRLGLSVFGLIFKAGFEKHVSVC 222
EAL+LF + +K ++ TF S+ C IN SV GLI K GFE + V
Sbjct: 347 EEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP----KSVHGLIIKTGFENYKLVS 402
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N+L+ + K G++D A +VF++M ++DV+SWT
Sbjct: 403 NALVDMYAKTGDMDCAYTVFEKMLEKDVISWT---------------------------- 434
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
++ Y Q+ EE+ ++F M P+ + +LSA A L L G VH
Sbjct: 435 ---SLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDF 491
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+K G+ + N+L+ +Y+KCG D +F S+ KD V++W ++I GY NG+
Sbjct: 492 IKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKD---VITWTAIIVGYAQNGKGR 548
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
+ + +D M+ SG P+ TF +L A +
Sbjct: 549 NSLKFYD-------------------------------AMVSSGTRPDFITFIGLLFACS 577
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGDIESSRRVFDRMPDKNEI 518
+++G+ ++ K+ Y + G + D + +SG ++ ++++ D+M K +
Sbjct: 578 HAGLVDEGRKYFQQMNKV---YGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDA 634
Query: 519 S-WTVMVRG--------LAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ W ++ LAE + + NLF E+E + P +LS +++ S
Sbjct: 635 TVWKSLLSACRVHENLELAE----RAATNLF-ELEPMNAMP--YVMLSNMYSAS 681
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 159/319 (49%), Gaps = 29/319 (9%)
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
H + ++ +N L++ SK G+ D R +FD + +KD SWN+MI Y G+
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKD---EYSWNTMISSYVNVGR 111
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ EA+ELFD ++ ++WS+IISGY + F +F M L G ++ T SVL
Sbjct: 112 LVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRV 171
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKNEI 518
+S+ ++ G+ +HG ++K GF +VF+ T L D YAK + + +F + KN +
Sbjct: 172 CSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHV 231
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGL 567
WT MV G A++G +++ F M + N+ T ++L ACS H +
Sbjct: 232 LWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFI 291
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
V G F S N + +VDM ++ G L A++ + +M + D +W SL+
Sbjct: 292 VKSG---FGS---------NVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLM 338
Query: 628 SGCKTYKNEQIAERAVKNL 646
G + E+ A R KN+
Sbjct: 339 VGFVRHGLEEEALRLFKNM 357
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 340/618 (55%), Gaps = 52/618 (8%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
++ N +I + G +E+A+ +FD M ++N +SW ++++G+ ++ R +E+ F++
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N ISW + G++ NG EA ++F ++ E V V+++++ + + +S
Sbjct: 158 RNTISWNGLVSGYINNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEG----MISE 209
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+F EK+V ++ L+ G +D A +FD M ++DVV+ T ++ + ++G L
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRL 269
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EAR +FDEMP RN VSW+ MI Y Q+ + A +LF M
Sbjct: 270 VEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP------------------ 311
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
EK+ A++ Y+ CG + +F+++ + VV
Sbjct: 312 ---------------------EKNEVSWTAMLKGYTNCGRLDEASELFNAM---PIKSVV 347
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLS 445
+ N+MI +G NG++ +A+++FD M ++++ +WSA+I Y E K +L +F M
Sbjct: 348 ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVY-ERKGLELDALELFRMMQRE 406
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN + SVL A +A+L+ G+++H ++++ F DV++ + L Y K G++ +
Sbjct: 407 GIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKA 466
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
++VFDR K+ + W ++ G A+ G E++ +F +M + I P+++T + VL ACS++
Sbjct: 467 KQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYT 526
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G V KGL+ FNSME Y ++ HY C+VD+L R+G+L+EA D I MP E D+ W +
Sbjct: 527 GNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGA 586
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL C+T+ +AE A K L L ++ ++LLSNIYAS GRW D +R+ M ++ +
Sbjct: 587 LLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRV 646
Query: 686 RKSGGCSWVEVRNQVHFF 703
K GCSW+ V +VH F
Sbjct: 647 SKYPGCSWIVVEKKVHKF 664
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 227/492 (46%), Gaps = 75/492 (15%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y +++ EA + ++ + + N +++ I G + EA+ +FD MPERN VSWTA++
Sbjct: 139 YFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMV 198
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G++K G + E+ F + P +NV+SWT + G +Q G EA +LF + E V
Sbjct: 199 RGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTN 258
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
C+ + + R ++F ++V ++IT ++ +VD+AR +F+ M
Sbjct: 259 MIGGYCQV-GRLVEAR-------MLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM 310
Query: 246 EKRDVVSWTVILDVFIEMGDLGE-------------------------------ARRIFD 274
+++ VSWT +L + G L E AR++FD
Sbjct: 311 PEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFD 370
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+M E++E +WS MI Y + G +A LFR M R +PN VLS A L L
Sbjct: 371 QMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDH 430
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +HA +++ + DV++++ L+ +Y KCG + VFD KD VV WNS+I G
Sbjct: 431 GREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD---VVMWNSIITG 487
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y +G EA VF++M SG +P+ TF
Sbjct: 488 YAQHGLGVEA-------------------------------LRVFHDMHFSGIMPDDVTF 516
Query: 455 SSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
VL A + +++KG ++ + K + + D ++G + + + ++MP
Sbjct: 517 VGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMP 576
Query: 514 -DKNEISWTVMV 524
+ + I W ++
Sbjct: 577 MEADAIIWGALL 588
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 210/470 (44%), Gaps = 35/470 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGI------HKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
KD+ ++ +I G G L++ + + T ++ Y+ +++ A ++ + +
Sbjct: 251 KDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM 310
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ V M+ G L+EA LF+ MP ++ V+ A+I F ++G V ++ F+
Sbjct: 311 PEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFD 370
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ ++ +W+A I + + G +AL+LF + G++PN + S+ CA + +
Sbjct: 371 QMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDH 430
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + ++ F+ V V + L+++ +K G + A+ VFDR +DVV W I+ + +
Sbjct: 431 GREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQ 490
Query: 263 MGDLGEARRIFDE------MPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPN 315
G EA R+F + MP ++V++ +++ + +G ++ +F M T+Y +
Sbjct: 491 HGLGVEALRVFHDMHFSGIMP--DDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQK 548
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
++ ++ L L M + + K+ +E D I AL+ + +
Sbjct: 549 IEHYACMVDLLGRAGKLNEAMDL---IEKMPMEADAIIWGALLGACRTHMKLDLAEVAAK 605
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSWSAI-------- 422
++ + + + + Y G+ ++ EL NM R SW +
Sbjct: 606 KLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFT 665
Query: 423 ---ISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSVLCASASVASLE 468
SG+ EH + + + + +L +G P++S + V SLE
Sbjct: 666 GGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLE 715
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 213/738 (28%), Positives = 365/738 (49%), Gaps = 109/738 (14%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E NSY +L+ + + G+ +H +I GI + L +L+ MY+ +
Sbjct: 366 ELGLNSYCS----VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLV 421
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE------------------ 115
+ +I + + + N +++ + GN E+ LF M +
Sbjct: 422 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 481
Query: 116 ---------------------RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
N +LI+ + K G VE + F+ +V+SW +
Sbjct: 482 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 541
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I G V NGFS L++F+++L GV+ + T S+ A A I + LG ++ G KA
Sbjct: 542 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
F + V N+L LD++ + G+L A +F
Sbjct: 602 FSEEVVFSNTL-------------------------------LDMYSKCGNLNGATEVFV 630
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+M + VSW+ IA Y + G +A LF +M +P+ + ++ A A +L
Sbjct: 631 KMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDK 690
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VH++V+K G+ ++ ++NALI++Y+KCG
Sbjct: 691 GRDVHSYVIKNGMGSNLPVTNALINMYAKCG----------------------------- 721
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
+EEA+ +F +P ++ VSW+ +I GY ++ + +F +M + P+ T
Sbjct: 722 -----SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFK-PDDITM 775
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
+ VL A A +A+L+KG+++HG I++ G+ D+ + AL D YAK G + ++ +FD +P
Sbjct: 776 ACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPK 835
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
K+ ISWTVM+ G G+ E+I+ F EM I P+E + +L ACSHSGL+++G K+
Sbjct: 836 KDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKF 895
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
FNSM ++P HY CVVD+L+R G LS+A FI SMP +PD+ W LLSGC+ +
Sbjct: 896 FNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHH 955
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+ ++AE+ +++++L ++ YV+L+N+YA A +W + +RK M ++G +++ GCSW+
Sbjct: 956 DVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWI 1015
Query: 695 EVRNQVHFFFQKTDHNPK 712
EV + + F +P+
Sbjct: 1016 EVGGKFNIFVAGNSKHPQ 1033
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 166/389 (42%), Gaps = 57/389 (14%)
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I ++ + G A L + Y N+ C VL A K+L G VH+ ++ GI
Sbjct: 343 INKFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSLEDGKRVHSVIISNGI 400
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D + L+ +Y CG+ GR +FD I+ V WN ++ Y G E+ L
Sbjct: 401 SIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK---VFLWNLLMSEYAKIGNFRESVSL 457
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F M K G + N TF+ VL A++ +
Sbjct: 458 FKKMQKL-------------------------------GVVGNCYTFTCVLKCFAALGKV 486
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++ K +HG ++KLGF + + +L Y K G +ES+ +FD + + + +SW M+ G
Sbjct: 487 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 546
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG-------LVDKGLKYFNSMEP 580
+G++ + +F +M + + T++SVL A ++ G L G+K S E
Sbjct: 547 VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEV 606
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+++ ++DM S+ G L+ A + M + +W S ++ Y E +
Sbjct: 607 VFS--------NTLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSTIAA---YVREGLYS 654
Query: 641 RAVKNLWKLAEE--HPAGYVLLSNIYASA 667
A+ ++ + P Y + S ++A A
Sbjct: 655 DAIGLFDEMQSKGVRPDIYTVTSIVHACA 683
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 215/739 (29%), Positives = 366/739 (49%), Gaps = 106/739 (14%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
+SF + T + L+ +S + QGR +H H++ + + L +L MY +
Sbjct: 61 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF------DGMPER------------ 116
A E+ + +LV + +I Q G EA RL+ D +P++
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 117 ---------------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
+ ++ ALI+ +++ ++ ++ F P +++ISW++
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 156 ICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I GF Q GF FEAL ++L GV PNE F S KAC+ + G + GL K+
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS- 299
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+LA + ++ + D++ G L ARR+FD
Sbjct: 300 ---------------------ELAG---------NAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
++ + SW+V+IA +GY +EA +F QM F P+ +L A AL
Sbjct: 330 QIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ 389
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
GM +H++++K G D+ + N+L+ +Y+ C D F+
Sbjct: 390 GMQIHSYIIKWGFLADLTVCNSLLTMYTFCS---DLYCCFN------------------- 427
Query: 395 YGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
LF++ D VSW+ I++ L+H+Q + +F ML+S P+ T
Sbjct: 428 ------------LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
++L ++SL+ G +H +K G + F+ L D YAK G + +RR+FD M
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+++ +SW+ ++ G A+SG+ +E++ LF+EM+ I PN +T + VL ACSH GLV++GLK
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ +M+ + I P H +CVVD+L+R+GRL+EAE FI+ M EPD W +LLS CKT
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 655
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
N +A++A +N+ K+ + +VLL +++AS+G W +A +R M + ++K G SW
Sbjct: 656 GNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSW 715
Query: 694 VEVRNQVHFFFQKTDHNPK 712
+E+ +++H FF + +P+
Sbjct: 716 IEIEDKIHIFFAEDIFHPE 734
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 225/487 (46%), Gaps = 80/487 (16%)
Query: 178 SGVKPNEVT---FSSICKACAEINDFRLGLSVFGLI-----FKAGFEKHVS-VCNSLITL 228
S +K E+ +S+CK+ N +R L F FK ++S +C +
Sbjct: 26 STIKTEELMNDHINSLCKS----NFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR 81
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
SL G + + + K D + IL ++ + G L +AR +FD MPERN VS++ +I
Sbjct: 82 SLAQGR-KIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVI 140
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
Y+Q+G EA RL+ +M + P+ F ++ A AS + G +HA V+K+
Sbjct: 141 TGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS 200
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
+ NALI +Y + + D VF I KD ++SW+S+I G+ G EA
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD---LISWSSIIAGFSQLGFEFEA---- 253
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
L H + L F VF+ PN+ F S L A +S+ +
Sbjct: 254 ------------------LSHLKEMLSFGVFH--------PNEYIFGSSLKACSSLLRPD 287
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
G +HG IK + G +L D YA+ G + S+RRVFD++ + SW V++ GLA
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGLVDKG----LK 573
+GYA E++++F +M + P+ +++ S+L A + HS ++ G L
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
NS+ +Y + C ++ EDF N+ DS +W ++L+ C
Sbjct: 408 VCNSLLTMYTFCSD---LYCCFNLF---------EDFRNN----ADSVSWNTILTAC--L 449
Query: 634 KNEQIAE 640
++EQ E
Sbjct: 450 QHEQPVE 456
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 317/596 (53%), Gaps = 65/596 (10%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+ V TA++ + K + ++ F P V + A + G V+ G EA+ LF ++
Sbjct: 326 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 385
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
S ++ + V+ S + ACAE + G V L K+GF+ + V N+
Sbjct: 386 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA------------ 433
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
+LD++ + L EA IF M +++ VSW+ +IA Q+G+
Sbjct: 434 -------------------VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGH 474
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
++ F +M R+ KP+ + VL A A+L++L G+ VH V+K G+ D F+++
Sbjct: 475 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 534
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
++D+Y KCG ++EA++L D + +
Sbjct: 535 VVDMYCKCG----------------------------------IIDEAQKLHDRIGGQQV 560
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSW+AI+SG+ +K+ + F+EML G P+ TF++VL A++A++E GK +HG+
Sbjct: 561 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 620
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
IIK D ++ + L D YAK GD+ S VF+++ ++ +SW M+ G A G E+
Sbjct: 621 IIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEA 680
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ +FE M+K ++ PN T ++VL ACSH GL D G +YF+ M Y ++P H+ C+VD
Sbjct: 681 LRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVD 740
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L RS EA FINSMPF+ D+ W +LLS CK ++ +IAE A N+ L + +
Sbjct: 741 ILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSV 800
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y+LLSN+YA +G+W D R+L+ + L+K GCSW+EV++++H F +P+
Sbjct: 801 YILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 856
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 221/457 (48%), Gaps = 48/457 (10%)
Query: 180 VKPNEVTFSSICKACAEIN--DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
V P VTFS + ++CA+ G + + +GF V N L+ + +
Sbjct: 53 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAAC 112
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR VFD M +RD VSW +L + GD+ A +FD MP+ + VSW+ +++ Y Q G
Sbjct: 113 ARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMF 172
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+E+ LF +M R P+ + F+++L + ++L+ L G+ VHA +K G+E DV +AL
Sbjct: 173 QESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSAL 232
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+Y KC D F YG MP+RN V
Sbjct: 233 VDMYGKCRSLDDALCFF--------------------YG--------------MPERNWV 258
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW A I+G ++++Q+ +F EM G ++ +++S + A+++ L G+ LH
Sbjct: 259 SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 318
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F D +GTA+ D YAK+ + +RR F +P+ + M+ GL +G E++
Sbjct: 319 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAM 378
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME-PIYNIKPNGRHYTC--- 593
LF+ M ++SI + +++ V AC+ + KG YF + IK C
Sbjct: 379 GLFQFMIRSSIRFDVVSLSGVFSACAET----KG--YFQGQQVHCLAIKSGFDVDICVNN 432
Query: 594 -VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
V+D+ + L EA M + DS +W ++++
Sbjct: 433 AVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAA 468
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 222/494 (44%), Gaps = 66/494 (13%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+ D F +++ +C + G A + G+ E + + +AL+ + K ++++
Sbjct: 187 VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGL-EIDVRTGSALVDMYGKCRSLDDA 245
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+ +F P +N +SW AAI G VQN L+LF+++ G+ ++ +++S ++CA +
Sbjct: 246 LCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAM 305
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+ G + K F D V T I+
Sbjct: 306 SCLNTGRQLHAHAIKNKFSS-------------------------------DRVVGTAIV 334
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
DV+ + L +ARR F +P + + M+ ++G EA LF+ M R S + +
Sbjct: 335 DVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVV 394
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
S V SA A K G VH +K G + D+ ++NA++DLY KC + L+F +
Sbjct: 395 SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM 454
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+KD VSWN++I NG +D
Sbjct: 455 KQKD---SVSWNAIIAALEQNG-------------------------------HYDDTIL 480
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
FNEML G P+ T+ SVL A A++ SLE G +H K+IK G D F+ + + D Y
Sbjct: 481 HFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYC 540
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G I+ ++++ DR+ + +SW ++ G + + ++E+ F EM + P+ T +
Sbjct: 541 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 600
Query: 558 VLFACSHSGLVDKG 571
VL C++ ++ G
Sbjct: 601 VLDTCANLATIELG 614
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 136/553 (24%), Positives = 241/553 (43%), Gaps = 67/553 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ + A+R+FD MP R+ VSW +++ + G + ++ F+ P +
Sbjct: 96 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 155
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW A + G+ Q G E++ LF+++ GV P+ TF+ + K+C+ + + LG+ V
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 215
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L K G E V ++L+ + K +D A F M +R+ V
Sbjct: 216 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWV----------------- 258
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
SW IA Q+ LF +M R + ++ + A+
Sbjct: 259 --------------SWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAA 304
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ L +G +HAH +K D + A++D+Y+K D R F + V +
Sbjct: 305 MSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE---TS 361
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+M+ G G EA LF M + S+I +FD+V
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIR------SSI--------RFDVV------------- 394
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ S V A A +G+ +H IK GF D+ + A+ D Y K + + +
Sbjct: 395 ----SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 450
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F M K+ +SW ++ L ++G+ ++I F EM + + P++ T SVL AC+ +
Sbjct: 451 FQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSL 510
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ GL + + + + + VVDM + G + EA+ + + + +W ++LS
Sbjct: 511 EYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILS 568
Query: 629 GCKTYKNEQIAER 641
G K + A++
Sbjct: 569 GFSLNKESEEAQK 581
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 193/470 (41%), Gaps = 104/470 (22%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH H IK +R + T ++ +Y + +A L + N M+ ++
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370
Query: 100 WGNLEEAQRLFD-------------------------GMPERNEVSWTALISGF------ 128
G EA LF G + +V A+ SGF
Sbjct: 371 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 430
Query: 129 --------MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
K + E+ F+ ++ +SW A I QNG + + F ++L G+
Sbjct: 431 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 490
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP++ T+ S+ KACA + GL V + K+G V ++++ + K G +D A+
Sbjct: 491 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 550
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ DR+ + VVSW IL F N+ S EEA
Sbjct: 551 LHDRIGGQQVVSWNAILSGF-----------------SLNKES--------------EEA 579
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+ F +M KP+ F+ VL A+L + G +H ++K + D +IS+ L+D+
Sbjct: 580 QKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDM 639
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG+ D LVF+ + ++D VSWN+MI GY L+G EA +F+ M K N V
Sbjct: 640 YAKCGDMPDSLLVFEKVEKRD---FVSWNAMICGYALHGLGVEALRMFERMQKENVV--- 693
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
PN +TF +VL A + V + G
Sbjct: 694 ----------------------------PNHATFVAVLRACSHVGLFDDG 715
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 142/308 (46%), Gaps = 22/308 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
KD S N +I +GH T +H L R ++ ++ + V
Sbjct: 457 KDSVSWNAIIAALEQNGHYDDTILHFNEML-----------RFGMKPDDFT-----YGSV 500
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ C ++++G + + + G+ V+ T ++ + K G ++E+ +R Q
Sbjct: 501 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST-VVDMYCKCGIIDEAQKLHDRIGGQQ 559
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW A + GF N S EA K F ++L+ G+KP+ TF+++ CA + LG + G
Sbjct: 560 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 619
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I K + ++L+ + K G++ + VF+++EKRD VSW ++ + G E
Sbjct: 620 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 679
Query: 269 ARRIFDEMPERNEV----SWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVL 323
A R+F+ M + N V ++ ++ + G ++ R F M T Y +P F+ ++
Sbjct: 680 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 739
Query: 324 SALASLKA 331
L K
Sbjct: 740 DILGRSKG 747
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 310/591 (52%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TA + + K R+ ++ F P S+ A I G+ + +AL +F L + +
Sbjct: 278 TATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLG 337
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+E++ S AC+ I G+ + GL K G ++ V N+
Sbjct: 338 FDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANT----------------- 380
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
ILD++ + G L EA IF+EM R+ VSW+ +IA + Q+ +
Sbjct: 381 --------------ILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTL 426
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF M R + +P+ + V+ A A +AL G +H ++K G+ D F+ +AL+D+Y
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMY 486
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG + EA+++ + ++ VSW++
Sbjct: 487 GKCG----------------------------------MLMEAEKIHARLEEKTTVSWNS 512
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IISG+ KQ + F++ML G IP+ T+++VL A++A++E GK +H +I+KL
Sbjct: 513 IISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQ 572
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV++ + L D Y+K G+++ SR +F++ P ++ ++W+ M+ A G +++INLFE
Sbjct: 573 LHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFE 632
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM+ ++ PN +SVL AC+H G VDKGL YF M Y + P HY+C+VD+L RS
Sbjct: 633 EMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRS 692
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G+++EA I SMPFE D W +LLS CK N ++AE+A +L +L + + YVLL+
Sbjct: 693 GQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLA 752
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+YA G W + +R +M L+K GCSW+EVR++VH F +P+
Sbjct: 753 NVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPR 803
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 272/568 (47%), Gaps = 75/568 (13%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ V NC++ + + A ++FD MP+R+ +SW LI G+ G + + F+ P
Sbjct: 41 IYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPE 100
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW + + ++ NG + +++++F+++ + + TF+ I KAC+ I D+ LGL V
Sbjct: 101 RDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQV 160
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
L + GFE DVV+ + ++D++ + L
Sbjct: 161 HCLAIQMGFEN-------------------------------DVVTGSALVDMYSKCKKL 189
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A R+F EMPERN V WS +IA Y Q+ E +LF+ M + + S ++ V +
Sbjct: 190 DDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSC 249
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L A + G +H H LK D I A +D+Y+KC D VF+++
Sbjct: 250 AGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ--- 306
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
S+N++I GY Q +A ++F ++ +RN++ F+E+ LSG
Sbjct: 307 SYNAIIVGYARQDQGLKALDIFQSL-QRNNLG--------------------FDEISLSG 345
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
L A + + +G LHG +K G +++ + + D Y K G + +
Sbjct: 346 ----------ALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEAC 395
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+F+ M ++ +SW ++ ++ ++++LF M ++++ P++ T SV+ AC+
Sbjct: 396 LIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQ 455
Query: 567 LVDKGLKYFNSMEPIYNIKPN-GRHY---TCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
++ G + + IK G + + +VDM + G L EAE I++ E + +
Sbjct: 456 ALNYGTEIHGRI-----IKSGMGLDWFVGSALVDMYGKCGMLMEAEK-IHARLEEKTTVS 509
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLA 650
W S++SG + K + A+R + ++
Sbjct: 510 WNSIISGFSSQKQSENAQRYFSQMLEMG 537
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 232/468 (49%), Gaps = 60/468 (12%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++TFS I + C+ + G V + GF + V N L+ K +++ A VFD
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
RM +RDV+SW ++ + +G++G A+ +FD MPER+ VSW+ +++ Y +G ++ +
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M + + F+++L A + ++ G+ VH +++G E DV +AL+D+YSK
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C + D VF + E++ +V W+++I GY N + E +LF +M K
Sbjct: 186 CKKLDDAFRVFREMPERN---LVCWSAVIAGYVQNDRFIEGLKLFKDMLK---------- 232
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
G ++ST++SV + A +++ + G LHG +K F
Sbjct: 233 ---------------------VGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFA 271
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
YD +GTA D YAK + + +VF+ +P+ S+ ++ G A +++++F+ +
Sbjct: 272 YDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSL 331
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC---------- 593
++ ++ +E+++ L ACS ++ + L+ I+ +G C
Sbjct: 332 QRNNLGFDEISLSGALTACS---VIKRHLE---------GIQLHGLAVKCGLGFNICVAN 379
Query: 594 -VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
++DM + G L EA M D+ +W ++++ + +NE+I +
Sbjct: 380 TILDMYGKCGALMEACLIFEEME-RRDAVSWNAIIAAHE--QNEEIVK 424
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/585 (22%), Positives = 261/585 (44%), Gaps = 105/585 (17%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V + +++ + L++A R+F MPERN V W+A+I+
Sbjct: 172 DVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIA------------------- 212
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
G+VQN E LKLF +L+ G+ ++ T++S+ ++CA ++ F+LG
Sbjct: 213 ------------GYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQ 260
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G K+ F D + T LD++ +
Sbjct: 261 LHGHALKSDF-------------------------------AYDSIIGTATLDMYAKCER 289
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ +A ++F+ +P S++ +I Y + +A +F+ + R + + S L+A
Sbjct: 290 MFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTA 349
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ +K G+ +H +K G+ ++ ++N ++D+Y KCG + L+F+ + +D
Sbjct: 350 CSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRD---A 406
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN AII+ + ++++ ++F ML S
Sbjct: 407 VSWN-------------------------------AIIAAHEQNEEIVKTLSLFVSMLRS 435
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P+ T+ SV+ A A +L G ++HG+IIK G D F+G+AL D Y K G + +
Sbjct: 436 TMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEA 495
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
++ R+ +K +SW ++ G + ++ + F +M + I P+ T +VL C++
Sbjct: 496 EKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANM 555
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
++ G K ++ + + + +VDM S+ G + ++ P + D W++
Sbjct: 556 ATIELG-KQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP-KRDYVTWSA 613
Query: 626 LLSGCKTYKNEQIAERAVKNLW---KLAEEHPAGYVLLSNIYASA 667
++ Y + E+A+ NL+ +L P + +S + A A
Sbjct: 614 MICA---YAYHGLGEKAI-NLFEEMQLLNVKPNHTIFISVLRACA 654
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 219/533 (41%), Gaps = 106/533 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHGH +K+ + + T L MY + +A ++ L +N +I +
Sbjct: 258 GTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYAR 317
Query: 100 WGNLEEAQRLFDGMPERN----EVSWTALISG---------------------------- 127
+A +F + N E+S + ++
Sbjct: 318 QDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICV 377
Query: 128 -------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+ K G + E+ FE ++ +SW A I QN + L LF+ +L S +
Sbjct: 378 ANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTM 437
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P++ T+ S+ KACA G + G I K+G MG
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSG-----------------MG------- 473
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
D + ++D++ + G L EA +I + E+ VSW+ +I+ ++ E A
Sbjct: 474 -------LDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENA 526
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
R F QM P+ ++ VL A++ + G +HA +LK+ + DV+I++ L+D+
Sbjct: 527 QRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDM 586
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG +D RL+F+ ++D V+W++MI Y +G E+A LF+
Sbjct: 587 YSKCGNMQDSRLMFEKAPKRD---YVTWSAMICAYAYHGLGEKAINLFE----------- 632
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK- 479
EM L PN + F SVL A A + ++KG K++
Sbjct: 633 --------------------EMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSH 672
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESG 531
G + + + D +SG + + ++ + MP + +++ W ++ G
Sbjct: 673 YGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQG 725
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 45/266 (16%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K TFS +L +++ +L GK +H ++I GF +++ L Y KS + + +VFD
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 511 RMPDKNEISWTVMVRGLA-------------------------------ESGYAKESINL 539
RMP ++ ISW ++ G A +G ++SI +
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY-FNSMEPIYNIKPNGRHYTCVVDML 598
F M I + T +L AC SG+ D GL + + + + + +VDM
Sbjct: 126 FVRMRSLKIPHDYATFAVILKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE--RAVKNLWKLAEEHPAG 656
S+ +L +A MP E + W+++++G +N++ E + K++ K+ G
Sbjct: 184 SKCKKLDDAFRVFREMP-ERNLVCWSAVIAG--YVQNDRFIEGLKLFKDMLKV------G 234
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTE 682
+ + YAS R ++ KL T+
Sbjct: 235 MGVSQSTYASVFRSCAGLSAFKLGTQ 260
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 215/663 (32%), Positives = 341/663 (51%), Gaps = 110/663 (16%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQ---NVISWTAAICGFVQNGFSFEALKLFLKLLES 178
T L+S F ++G V+E+ FE P NV+ +T + GF + +ALK F+++ +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFE--PIDKKLNVLYYTM-LKGFAKVSDLDKALKFFVRMRDD 129
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
V+P F+ + K C + + R+G + GL+ K+GF
Sbjct: 130 EVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS---------------------- 167
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
D+ + T + +++ + + EAR++FD MPER+ VSW+ ++A Y+Q+G
Sbjct: 168 ---------LDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A + M + KP+ VL A+++L+ +R G +H + ++ G + V I+ AL+
Sbjct: 219 MALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALV 278
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKR 414
D+Y+KCG K RL+FD ++E++ VVSWNSMI Y N +EA +F M K
Sbjct: 279 DMYAKCGSLKTARLLFDGMLERN---VVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKP 335
Query: 415 NDVS-----------------------------------WSAIISGYLEHKQFDLVFAVF 439
DVS +++IS Y + K+ D ++F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 440 -----------NEMLL----SGEI----------------PNKSTFSSVLCASASVASLE 468
N M+L +G P+ T+ SV+ A A ++
Sbjct: 396 GKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITH 455
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K +HG +++ +VF+ TAL D YAK G I +R +FD M +++ +W M+ G
Sbjct: 456 HAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G K ++ LFEEM+K +I PN +T LSV+ ACSHSGLV+ GLK F+ M+ Y+I+P+
Sbjct: 516 THGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSM 575
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY +VD+L R+GRL+EA DFI MP +P N + ++L C+ +KN AE+ + L++
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFE 635
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
L E +VLL+NIY +A W VR M +GLRK+ GCS VE++N+VH FF +
Sbjct: 636 LNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695
Query: 709 HNP 711
+P
Sbjct: 696 AHP 698
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 203/429 (47%), Gaps = 77/429 (17%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG L+K+G + + T L MY R+ EA ++ + DLV N ++ Q
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 100 WGNLEEAQRLFDGMPERN-------------EVS-------------------------- 120
G A + + M E N VS
Sbjct: 214 NGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNI 273
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TAL+ + K G ++ + F+ +NV+SW + I +VQN EA+ +F K+L+ GV
Sbjct: 274 ATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGV 333
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP +V+ ACA++ D G + L + +++VSV NSLI++ K EVD A S
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+F +++ R +VSW + MI + Q+G P EA
Sbjct: 394 MFGKLQSRTIVSW-------------------------------NAMILGFAQNGRPIEA 422
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F QM + KP+T + V++A+A L +H V++ ++K+VF++ AL+D+
Sbjct: 423 LNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDM 482
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RND 416
Y+KCG RL+FD + E+ HV +WN+MI GYG +G + A ELF+ M K N
Sbjct: 483 YAKCGAIMIARLIFDMMSER---HVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNG 539
Query: 417 VSWSAIISG 425
V++ ++IS
Sbjct: 540 VTFLSVISA 548
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 173/378 (45%), Gaps = 68/378 (17%)
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C+ + + R + LIFK G + L++L + G VD A VF+ ++K+ V +
Sbjct: 47 CSSLKELR---HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLY 103
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+L F ++ DL ++A + F +M +
Sbjct: 104 YTMLKGFAKVSDL-------------------------------DKALKFFVRMRDDEVE 132
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P F+ +L LR G +H ++K G D+F L ++Y+KC + + R V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FD + E+D +VSWN+++ GY NG A E+ + M + N
Sbjct: 193 FDRMPERD---LVSWNTIVAGYSQNGMARMALEMVNLMCEEN------------------ 231
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
P+ T SVL A +++ + GK++HG ++ GF V + TAL
Sbjct: 232 -------------LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALV 278
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK G ++++R +FD M ++N +SW M+ ++ KE++ +F++M + P ++
Sbjct: 279 DMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDV 338
Query: 554 TILSVLFACSHSGLVDKG 571
+++ L AC+ G +++G
Sbjct: 339 SVMGALHACADLGDLERG 356
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 154/349 (44%), Gaps = 44/349 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L +++ L+ G+ +HG+ ++ G + T L+ MY A + +
Sbjct: 238 TIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGM 297
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------P---------------------- 114
++V N MI+A +Q N +EA +F M P
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 115 -----------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+RN +LIS + K V+ + F + + ++SW A I GF QNG
Sbjct: 358 FIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNG 417
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EAL F ++ VKP+ T+ S+ A AE++ + G++ + +K+V V
Sbjct: 418 RPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTT 477
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE----R 279
+L+ + K G + +AR +FD M +R V +W ++D + G A +F+EM +
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRP 537
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
N V++ +I+ + SG E + F M YS +P+ + ++ L
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLG 586
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 343/724 (47%), Gaps = 110/724 (15%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
CL+K V +GR +HGH++K G+ + + LL MY +A ++ + +
Sbjct: 114 CLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEV 173
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGM-------PER---------------------- 116
DLV N MI+ + + + F M P R
Sbjct: 174 DLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREI 233
Query: 117 -----------NEVSWTALISGFMKHGRVEESMWYF-----ERNPFQNVISWTAAICGFV 160
E ++LI +MK G ++ + F + + +N + W I G+V
Sbjct: 234 HGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYV 293
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
NG +AL LF+K++ G+KP+ T S+ C+E D G + GLIFK G + ++
Sbjct: 294 SNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNI- 352
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
R+E T +LD++++ GD+G +IF N
Sbjct: 353 -----------------------RVE-------TALLDMYLKCGDMGTGLKIFRRSQNHN 382
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
+ WS +I+ QSG P +A LF + ++ VL A +SL GM +H
Sbjct: 383 LIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHG 442
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
K+G DVF+ +AL+DLY+KC +
Sbjct: 443 LATKMGFVSDVFVGSALVDLYAKCRD---------------------------------- 468
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
M +K++F + +++ VSW+A+ISGY + + D F +M L PN T + +L
Sbjct: 469 MGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSV 528
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
A ++ + K++HG +I+ G V + +L TYAK GDI SS F++MP++N++SW
Sbjct: 529 CAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSW 588
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
++ G+ E I LF++M + I P+ +T ++L ACSH+G VD+G KYF SM
Sbjct: 589 NSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVE 648
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+N+KP YTC+VD+L R+G L++A D I +MP PD W SLL CK + +E +AE
Sbjct: 649 DFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAE 708
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
+++KL VLL+N+Y + G+ + VR + + GL+K GCSW+EV N
Sbjct: 709 IVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNF 768
Query: 701 HFFF 704
H F
Sbjct: 769 HIFI 772
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 230/491 (46%), Gaps = 73/491 (14%)
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVT-FSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+ ++GF +A+ ++LK+L+ GVK E F + KA + D G + G + K G
Sbjct: 83 YTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLD 142
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
VSV NSL+T+ K G V+ A +F++M + D+VS
Sbjct: 143 DVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVS------------------------- 177
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPN-TSCFSIVLSALASLKALRSG 335
W+ MI+ + +S + FR M + PN +C S +LS +SL++L G
Sbjct: 178 ------WNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSC-SSLQSLTHG 230
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA--HVVSWNSMIG 393
+H V+K G++ + ++ ++LI++Y KCG K+ +F+SI++KD + V WN MI
Sbjct: 231 REIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMIS 290
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
GY NG +A +F +M++ G P+ ST
Sbjct: 291 GYVSNGCFSQA-------------------------------LLLFIKMMVWGIKPDYST 319
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
S+ + + GK +HG I K G ++ + TAL D Y K GD+ + ++F R
Sbjct: 320 MVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQ 379
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+ N I W+ ++ A+SG +++ LF E + + +++VL ACS L +G++
Sbjct: 380 NHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQ 439
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ + + + +VD+ ++ + ++ + + D +W +L+SG Y
Sbjct: 440 -IHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLS-QKDLVSWNALISG---Y 494
Query: 634 KNEQIAERAVK 644
++ A+ A+K
Sbjct: 495 AQDECADEALK 505
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 49/354 (13%)
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNT-SCFSIVLSALASLKALRSGMHVHAHVLKI 345
+I Y + G+ ++A ++ +M K F ++ A L + G +H HVLK+
Sbjct: 79 VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G+ DV + N+L+ +Y KCG +D +F+ + E D +VSWN+MI G+ + +
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVD---LVSWNTMISGFQKSMDYTRSL 195
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
F +M W F ++ PN+ S + + +S+
Sbjct: 196 MFFRSM------VWE---------------FGIY---------PNRVACVSSILSCSSLQ 225
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-----NEISW 520
SL G+++HG ++K G + +L ++L + Y K G I+++ +F+ + DK N + W
Sbjct: 226 SLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIW 285
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
VM+ G +G +++ LF +M I P+ T++S+ CS S + G K + +
Sbjct: 286 NVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFG-KQIHGLIF 344
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN----AWASLLSGC 630
+ +K N R T ++DM + G + F N W++++S C
Sbjct: 345 KFGLKNNIRVETALLDMYLKCGDMGTGLKI-----FRRSQNHNLIMWSAVISNC 393
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 313/596 (52%), Gaps = 65/596 (10%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+ V TA++ + K G + ++ F P NV + A + G V+ G EA++LF +
Sbjct: 286 DRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMT 345
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
SGV + ++ S + ACAE+ + GL V L K+GF+ V V N+
Sbjct: 346 RSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNA------------ 393
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
ILD++ + L EA +F EM +R+ VSW+ +IA Q+
Sbjct: 394 -------------------ILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNEC 434
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E+ +M R +P+ + VL A A L++L G+ VH +K G+ D F+S+
Sbjct: 435 YEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST 494
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
++D+Y KCG + EA++L D + +
Sbjct: 495 VVDMYCKCGA----------------------------------ITEAQKLHDRIGGQEL 520
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSW++IISG+ KQ + F+EML G P+ T+++VL A++A++E GK +HG+
Sbjct: 521 VSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQ 580
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
IIK D ++ + L D YAK G++ S +F++ + +SW M+ G A G E+
Sbjct: 581 IIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEA 640
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ +FE M++ ++ PN T ++VL ACSH GL+D G +YF+ M Y + P H+ C+VD
Sbjct: 641 LEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVD 700
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L RS EA +FI SMP E D+ W +LLS CK ++ ++AE A N+ +L + +
Sbjct: 701 ILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASV 760
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y+LLSN+YA +G+W+D R+LM + LRK GCSW+EV++++H F +P+
Sbjct: 761 YILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPR 816
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/591 (25%), Positives = 253/591 (42%), Gaps = 109/591 (18%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ + G A +FD MP R+ VSW +++ ++ G + + F P +
Sbjct: 56 VSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPD 115
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW I G+ Q+G ++ L +++ GV + T + + K+C ++D LG+ +
Sbjct: 116 VVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHA 175
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW-------------TV 255
L K G E V ++L+ + K +D A F M +R+ VSW T
Sbjct: 176 LAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTR 235
Query: 256 ILDVFIEMGDLG---------EARRIFDEMP----------------------------- 277
+++F++M LG A R MP
Sbjct: 236 GMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVD 295
Query: 278 -------------------ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
N + + M+ ++G EA +LF+ MTR +
Sbjct: 296 VYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVIS 355
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
S V SA A +K G+ VH +K G + DV + NA++DLY KC + LVF +
Sbjct: 356 LSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME 415
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
++D VSW+AII+ +++ ++ A
Sbjct: 416 QRD----------------------------------SVSWNAIIAALEQNECYEDTIAH 441
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
NEML SG P+ T+ SVL A A + SLE G +HGK IK G D F+ + + D Y K
Sbjct: 442 LNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCK 501
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G I ++++ DR+ + +SW ++ G + + ++E+ F EM + P+ T +V
Sbjct: 502 CGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATV 561
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY--TCVVDMLSRSGRLSEA 607
L C++ ++ G + I + G Y + +VDM ++ G + ++
Sbjct: 562 LDTCANLATIELGKQIHGQ---IIKQEMLGDEYISSTLVDMYAKCGNMPDS 609
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 203/446 (45%), Gaps = 40/446 (8%)
Query: 186 TFSSICKACAEINDFRL--GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
TFS + + CA L G + + +GF V N L+ + + G A VFD
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M RD VSW +L ++ GD A +F MP+ + VSW+ +I+ Y Q G + L
Sbjct: 79 TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
+M+R + + +++L + L L G+ +HA +K G+E DV +AL+D+Y K
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C D F + E++ VSW + I G N Q ELF M +
Sbjct: 199 CRSLDDALRFFHGMGERN---SVSWGAAIAGCVQNEQYTRGMELFVQMQRL--------- 246
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
G ++ ++S + A++ L + LH IK F
Sbjct: 247 ----------------------GLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFS 284
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D +GTA+ D YAK+G++ +RR F +P N + M+ GL +G E++ LF+ M
Sbjct: 285 SDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFM 344
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
++ + + +++ V AC+ +GL+ + +++ +++ R+ ++D+ +
Sbjct: 345 TRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRN--AILDLYGKCK 402
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLS 628
L EA M + DS +W ++++
Sbjct: 403 ALVEAYLVFQEME-QRDSVSWNAIIA 427
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 340/618 (55%), Gaps = 52/618 (8%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
++ N +I + G +E+A+ +FD M ++N +SW ++++G+ ++ R +E+ F++
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N ISW + G++ NG EA ++F ++ E V V+++++ + + +S
Sbjct: 158 RNTISWNGLVSGYINNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEG----MISE 209
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+F EK+V ++ L+ G +D A +FD M ++DVV+ T ++ + ++G L
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRL 269
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EAR +FDEMP RN VSW+ MI Y Q+ + A +LF M
Sbjct: 270 VEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP------------------ 311
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
EK+ A++ Y+ CG + +F+++ + VV
Sbjct: 312 ---------------------EKNEVSWTAMLKGYTNCGRLDEASELFNAM---PIKSVV 347
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLS 445
+ N+MI +G NG++ +A+++FD M ++++ +WSA+I Y E K +L +F M
Sbjct: 348 ACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVY-ERKGLELDALELFRMMQRE 406
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN + SVL A +A+L+ G+++H ++++ F DV++ + L Y K G++ +
Sbjct: 407 GIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKA 466
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
++VFDR K+ + W ++ G A+ G E++ +F +M + I P+++T + VL ACS++
Sbjct: 467 KQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYT 526
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G V KGL+ FNSME Y ++ HY C+VD+L R+G+L+EA D I MP E D+ W +
Sbjct: 527 GNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGA 586
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL C+T+ +AE A K L L ++ ++LLSNIYAS GRW D +R+ M ++ +
Sbjct: 587 LLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRV 646
Query: 686 RKSGGCSWVEVRNQVHFF 703
K GCSW+ V +VH F
Sbjct: 647 SKYPGCSWIVVEKKVHKF 664
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 227/492 (46%), Gaps = 75/492 (15%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y +++ EA + ++ + + N +++ I G + EA+ +FD MPERN VSWTA++
Sbjct: 139 YFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMV 198
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G++K G + E+ F + P +NV+SWT + G +Q G EA +LF + E V
Sbjct: 199 RGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTN 258
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
C+ + + R ++F ++V ++IT ++ +VD+AR +F+ M
Sbjct: 259 MIGGYCQV-GRLVEAR-------MLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM 310
Query: 246 EKRDVVSWTVILDVFIEMGDLGE-------------------------------ARRIFD 274
+++ VSWT +L + G L E AR++FD
Sbjct: 311 PEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFD 370
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+M E++E +WS MI Y + G +A LFR M R +PN VLS A L L
Sbjct: 371 QMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDH 430
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +HA +++ + DV++++ L+ +Y KCG + VFD KD VV WNS+I G
Sbjct: 431 GREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD---VVMWNSIITG 487
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y +G EA VF++M SG +P+ TF
Sbjct: 488 YAQHGLGVEA-------------------------------LRVFHDMHFSGIMPDDVTF 516
Query: 455 SSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
VL A + +++KG ++ + K + + D ++G + + + ++MP
Sbjct: 517 VGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMP 576
Query: 514 -DKNEISWTVMV 524
+ + I W ++
Sbjct: 577 MEADAIIWGALL 588
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 210/470 (44%), Gaps = 35/470 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGI------HKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
KD+ ++ +I G G L++ + + T ++ Y+ +++ A ++ + +
Sbjct: 251 KDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM 310
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ V M+ G L+EA LF+ MP ++ V+ A+I F ++G V ++ F+
Sbjct: 311 PEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFD 370
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ ++ +W+A I + + G +AL+LF + G++PN + S+ CA + +
Sbjct: 371 QMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDH 430
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + ++ F+ V V + L+++ +K G + A+ VFDR +DVV W I+ + +
Sbjct: 431 GREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQ 490
Query: 263 MGDLGEARRIFDE------MPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPN 315
G EA R+F + MP ++V++ +++ + +G ++ +F M T+Y +
Sbjct: 491 HGLGVEALRVFHDMHFSGIMP--DDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQK 548
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
++ ++ L L M + + K+ +E D I AL+ + +
Sbjct: 549 IEHYACMVDLLGRAGKLNEAMDL---IEKMPMEADAIIWGALLGACRTHMKLDLAEVAAK 605
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSWSAI-------- 422
++ + + + + Y G+ ++ EL NM R SW +
Sbjct: 606 KLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFT 665
Query: 423 ---ISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSVLCASASVASLE 468
SG+ EH + + + + +L +G P++S + V SLE
Sbjct: 666 GGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLE 715
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 322/628 (51%), Gaps = 66/628 (10%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF VV+ C + NI+ G A + G +++ + AL+ +MK GRV+ + FE+
Sbjct: 204 GFSCVVNACTGSRNIEAGRQVHAMVVRMGY-DKDVFTANALVDMYMKMGRVDIASVIFEK 262
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +V+SW A I G V NG A++L L++ SG+ PN T SSI KAC+ F LG
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + KA + + I + L +D++ +
Sbjct: 323 RQIHGFMIKANADS-----DDYIGVGL--------------------------VDMYAKN 351
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
L +AR++FD M R+ + + +I+ + G +EA LF ++ + N + + VL
Sbjct: 352 HFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ ASL+A + VHA +KIG D + N LID Y KC D VF+ D+
Sbjct: 412 KSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI- 470
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
++ SMI E A +LF EML
Sbjct: 471 --IACTSMITALSQCDHGEGAIKLF-------------------------------MEML 497
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G P+ SS+L A AS+++ E+GK +H +IK F D F G AL TYAK G IE
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ F +P++ +SW+ M+ GLA+ G+ K ++ LF M I PN +T+ SVL AC+
Sbjct: 558 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN 617
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLVD+ +YFNSM+ ++ I HY+C++D+L R+G+L +A + +NSMPF+ +++ W
Sbjct: 618 HAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIW 677
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL + +K+ ++ + A + L+ L E +VLL+N YASAG W + VRKLM +
Sbjct: 678 GALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDS 737
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++K SW+EV+++VH F +P
Sbjct: 738 NIKKEPAMSWIEVKDKVHTFIVGDKSHP 765
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 204/437 (46%), Gaps = 69/437 (15%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LIS + K R + +F+ P +SW++ + + NG A++ F + GV N
Sbjct: 43 LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E + K + D RLG V + GF V V N+L+ + G +D AR VF+
Sbjct: 103 EFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 244 RME-KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ +R+ VSW ++ +++ G+A ++F EM WS
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM------VWS----------------- 196
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+P FS V++A + + +G VHA V+++G +KDVF +NAL+D+Y
Sbjct: 197 --------GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYM 248
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
K G ++F+ + + D VVSWN++I G LNG
Sbjct: 249 KMGRVDIASVIFEKMPDSD---VVSWNALISGCVLNGH---------------------- 283
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+H+ +L+ +M SG +PN T SS+L A + + + G+ +HG +IK
Sbjct: 284 -----DHRAIELLL----QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA 334
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D ++G L D YAK+ ++ +R+VFD M ++ I ++ G + G E+++LF E
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYE 394
Query: 543 MEKTSITPNELTILSVL 559
+ K + N T+ +VL
Sbjct: 395 LRKEGLGVNRTTLAAVL 411
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 132/309 (42%), Gaps = 42/309 (13%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L+ A+ +AL G H+HA +LK G N LI YSKC R FD I D
Sbjct: 11 LTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRFFDEI--PDP 66
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
H VSW+S++ Y NG +P+ SAI F+ M
Sbjct: 67 CH-VSWSSLVTAYSNNG-----------LPR------SAI--------------QAFHGM 94
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G N+ VL V G +H + GF DVF+ AL Y G +
Sbjct: 95 RAEGVCCNEFALPVVL---KCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFM 151
Query: 503 ESSRRVFDRM-PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ +RRVF+ ++N +SW ++ ++ ++I +F EM + I P E V+ A
Sbjct: 152 DDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNA 211
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+ S ++ G + ++M + +VDM + GR+ A MP + D
Sbjct: 212 CTGSRNIEAG-RQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVV 269
Query: 622 AWASLLSGC 630
+W +L+SGC
Sbjct: 270 SWNALISGC 278
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 192/485 (39%), Gaps = 64/485 (13%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + GR +HG +IK + Y+ L+ MY + +A ++ + D
Sbjct: 309 ILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRD 368
Query: 87 LVVHNCMINANIQWGNLEEAQRLF-------------------------DGMPERNEVSW 121
L++ N +I+ G +EA LF + +V
Sbjct: 369 LILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHA 428
Query: 122 TALISGFMKHGRVE----ESMW----------YFERNPFQNVISWTAAICGFVQNGFSFE 167
A+ GF+ V +S W FE ++I+ T+ I Q
Sbjct: 429 LAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEG 488
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
A+KLF+++L G++P+ SS+ ACA ++ + G V + K F N+L+
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 548
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF----DEMPERNEVS 283
K G ++ A F + +R VVSW+ ++ + G A +F DE N ++
Sbjct: 549 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 608
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+ ++ N +G +EA R F M + +S ++ L L M + V
Sbjct: 609 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL---V 665
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV----EKDVAHVVSWNSMIGGYGLN 398
+ + + I AL+ + + G+L + + EK HV+ N+ G+
Sbjct: 666 NSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASA-GMW 724
Query: 399 GQMEEAKELF--DNMPKRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEMLLSGEIP 449
++ + ++L N+ K +SW + I G H ++A E+ G++
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL---GDLM 781
Query: 450 NKSTF 454
+K+ F
Sbjct: 782 SKAGF 786
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 16/233 (6%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T S L A+ +L G LH ++K G L Y+K +RR FD +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRFFDEI 63
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
PD +SW+ +V + +G + +I F M + NE L V+ C + +
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFA-LPVVLKCVPDARLGAQV 122
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
++M + +V M G + +A N E ++ +W L+S
Sbjct: 123 ---HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA--Y 177
Query: 633 YKNEQIAERAV---KNLWKLAEEHPAGYVLLSNIYAS-----AGRWIDAMNVR 677
KN+Q + + +W + G+ + N AGR + AM VR
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVR 230
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 224/700 (32%), Positives = 339/700 (48%), Gaps = 96/700 (13%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+ +F ++T LLK +Q +I G+ LH K+ I YL+
Sbjct: 2 QCTFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLS-------------- 47
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
N F L+ C G+L AQ FD N S+ LI+ + KH
Sbjct: 48 ---------NHFTLLYSKC--------GSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSL 90
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ + F+ P +++S+ I + G AL+LF ++ E + T S + A
Sbjct: 91 IHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIA 150
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C +D L + + G++ + SV N+++ + G ++ AR VF
Sbjct: 151 CG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFR---------- 198
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
EMG+ G R+EVSW+ MI Q EA LFR+M R K
Sbjct: 199 --------EMGEGG----------GRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLK 240
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC-GETKDGRL 372
+ + VL+A +K L GM H ++K G + + + LIDLYSKC G + R
Sbjct: 241 VDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRK 300
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
VF+ I D +V WN+MI G+ Q E+ E D W
Sbjct: 301 VFEEIAAPD---LVLWNTMISGF---SQYEDLSE---------DGIW------------- 332
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-VFLGTA 491
F EM +G P+ +F V A ++++S GK +H IK PY+ V + A
Sbjct: 333 -----CFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNA 387
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L Y+K G++ +RRVFD MP+ N +S M+ G A+ G ES+ LFE M + I PN
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPN 447
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+T ++VL AC H+G V++G KYFN M+ + I+P HY+C++D+L R+G+L EAE I
Sbjct: 448 TITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
+MPF P S WA+LL C+ + N ++A +A +L + A YV+LSN+YASA RW
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWE 567
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+A V++LM E+G++K GCSW+E+ +VH F + +P
Sbjct: 568 EAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHP 607
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 322/628 (51%), Gaps = 66/628 (10%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF VV+ C + NI+ G A + G +++ + AL+ +MK GRV+ + FE+
Sbjct: 204 GFSCVVNACTGSRNIEAGRQVHAMVVRMGY-DKDVFTANALVDMYMKMGRVDIASVIFEK 262
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +V+SW A I G V NG A++L L++ SG+ PN T SSI KAC+ F LG
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + KA + + I + L +D++ +
Sbjct: 323 RQIHGFMIKANADS-----DDYIGVGL--------------------------VDMYAKN 351
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
L +AR++FD M R+ + + +I+ + G +EA LF ++ + N + + VL
Sbjct: 352 HFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ ASL+A + VHA +KIG D + N LID Y KC D VF+ D+
Sbjct: 412 KSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI- 470
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
++ SMI E A +LF EML
Sbjct: 471 --IACTSMITALSQCDHGEGAIKLF-------------------------------MEML 497
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G P+ SS+L A AS+++ E+GK +H +IK F D F G AL TYAK G IE
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ F +P++ +SW+ M+ GLA+ G+ K ++ LF M I PN +T+ SVL AC+
Sbjct: 558 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN 617
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLVD+ +YFNSM+ ++ I HY+C++D+L R+G+L +A + +NSMPF+ +++ W
Sbjct: 618 HAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIW 677
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL + +K+ ++ + A + L+ L E +VLL+N YASAG W + VRKLM +
Sbjct: 678 GALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDS 737
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++K SW+EV+++VH F +P
Sbjct: 738 NIKKEPAMSWIEVKDKVHTFIVGDKSHP 765
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 203/437 (46%), Gaps = 69/437 (15%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LIS + K R + F+ P +SW++ + + NG A++ F + GV N
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E + K + D RLG V + GF V V N+L+ + G +D AR VF+
Sbjct: 103 EFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 244 RME-KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ +R+ VSW ++ +++ G+A ++F EM WS
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM------VWS----------------- 196
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+P FS V++A + + +G VHA V+++G +KDVF +NAL+D+Y
Sbjct: 197 --------GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYM 248
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
K G ++F+ + + D VVSWN++I G LNG
Sbjct: 249 KMGRVDIASVIFEKMPDSD---VVSWNALISGCVLNGH---------------------- 283
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+H+ +L+ +M SG +PN T SS+L A + + + G+ +HG +IK
Sbjct: 284 -----DHRAIELLL----QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA 334
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D ++G L D YAK+ ++ +R+VFD M ++ I ++ G + G E+++LF E
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYE 394
Query: 543 MEKTSITPNELTILSVL 559
+ K + N T+ +VL
Sbjct: 395 LRKEGLGVNRTTLAAVL 411
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 133/309 (43%), Gaps = 42/309 (13%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L+ A+ +AL G H+HA +LK G N LI YSKC R VFD I D
Sbjct: 11 LTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRVFDEI--PDP 66
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
H VSW+S++ Y NG +P+ SAI F+ M
Sbjct: 67 CH-VSWSSLVTAYSNNG-----------LPR------SAI--------------QAFHGM 94
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G N+ VL V G +H + GF DVF+ AL Y G +
Sbjct: 95 RAEGVCCNEFALPVVL---KCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFM 151
Query: 503 ESSRRVFDRM-PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ +RRVF+ ++N +SW ++ ++ ++I +F EM + I P E V+ A
Sbjct: 152 DDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNA 211
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+ S ++ G + ++M + +VDM + GR+ A MP + D
Sbjct: 212 CTGSRNIEAG-RQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVV 269
Query: 622 AWASLLSGC 630
+W +L+SGC
Sbjct: 270 SWNALISGC 278
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 192/485 (39%), Gaps = 64/485 (13%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + GR +HG +IK + Y+ L+ MY + +A ++ + D
Sbjct: 309 ILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRD 368
Query: 87 LVVHNCMINANIQWGNLEEAQRLF-------------------------DGMPERNEVSW 121
L++ N +I+ G +EA LF + +V
Sbjct: 369 LILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHA 428
Query: 122 TALISGFMKHGRVE----ESMW----------YFERNPFQNVISWTAAICGFVQNGFSFE 167
A+ GF+ V +S W FE ++I+ T+ I Q
Sbjct: 429 LAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEG 488
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
A+KLF+++L G++P+ SS+ ACA ++ + G V + K F N+L+
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 548
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF----DEMPERNEVS 283
K G ++ A F + +R VVSW+ ++ + G A +F DE N ++
Sbjct: 549 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 608
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+ ++ N +G +EA R F M + +S ++ L L M + V
Sbjct: 609 MTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL---V 665
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV----EKDVAHVVSWNSMIGGYGLN 398
+ + + I AL+ + + G+L + + EK HV+ N+ G+
Sbjct: 666 NSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASA-GMW 724
Query: 399 GQMEEAKELF--DNMPKRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEMLLSGEIP 449
++ + ++L N+ K +SW + I G H ++A E+ G++
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL---GDLM 781
Query: 450 NKSTF 454
+K+ F
Sbjct: 782 SKAGF 786
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 16/233 (6%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T S L A+ +L G LH ++K G L Y+K +RRVFD +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRVFDEI 63
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
PD +SW+ +V + +G + +I F M + NE L V+ C + +
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFA-LPVVLKCVPDARLGAQV 122
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
++M + +V M G + +A N E ++ +W L+S
Sbjct: 123 ---HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA--Y 177
Query: 633 YKNEQIAERAV---KNLWKLAEEHPAGYVLLSNIYAS-----AGRWIDAMNVR 677
KN+Q + + +W + G+ + N AGR + AM VR
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVR 230
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 193/621 (31%), Positives = 331/621 (53%), Gaps = 54/621 (8%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
NCMI+ + L +A+R+FD MP RN VSW AL++G+ + GRV E+ F+R P +NV+
Sbjct: 78 NCMISGLVGNRMLADARRVFDAMPVRNPVSWAALLTGYARCGRVAEARELFDRMPDRNVV 137
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + G+++NG A +LF ++ S N+V++ ++ + R +F L
Sbjct: 138 SWNAMMSGYLRNGMVERARELF-DMMPS---RNDVSWLTMISGYIKKRRLREARELFDL- 192
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
SVCN+L++ + + + A +F RM++RD VSW V++ + G + A+
Sbjct: 193 ---SPSHPTSVCNALLSGYVALSCLKDAEELFGRMQRRDPVSWNVMITGYARAGRMQVAQ 249
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+FDEMP+++ +SW+ ++ Y Q+G + ++++F+ +
Sbjct: 250 SLFDEMPQKDTISWTAVMRGYLQNGDVDASWKVFQDIP---------------------- 287
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
++DV N ++ + + D +F + E+D+ VSWN+
Sbjct: 288 -----------------DRDVVAWNTMMGGFVQSERLDDALRLFAEMPERDL---VSWNT 327
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
++ G+ G M A F MP++++ SW+ +ISG+ + A+ +EM+ G P+
Sbjct: 328 ILQGHVQQGDMATANTWFRGMPEKDETSWNTLISGHKDEG----ALALLSEMIRGGLRPD 383
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
++T S V+ AS+ +L GK +H +K GF +D + ++L Y+K G I + +VF
Sbjct: 384 EATLSVVISICASLVALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFK 443
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+ ++ ++W M+ A G A E++ LF +M K P+ T LSVL AC+H G + +
Sbjct: 444 LLVQRDTVTWNAMIATYAYHGMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYE 503
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G +YF SM+ +N+ P HY+C+VD+L R G + +A DF +P + NAW +L S C
Sbjct: 504 GCRYFRSMQEDWNLTPRSDHYSCMVDLLGRLGFIYQAYDFTRKIPSDLQINAWETLFSAC 563
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
+ + Q+ E K++ + Y LL+NIYAS W A +VR +M E+GL+K G
Sbjct: 564 NAHGDVQLGEVIAKDVLQARPSDGGMYTLLANIYASKEMWSSAASVRGVMKEQGLKKETG 623
Query: 691 CSWVEVRNQVHFFFQKTDHNP 711
CSWVE++ +V F + +P
Sbjct: 624 CSWVELKGEVVSFSSNDNAHP 644
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 22/185 (11%)
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D+F A+ + ++G + ++RRVFD MP++N +W M+ GL + ++ +F+ M
Sbjct: 42 DIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMP 101
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
N ++ ++L + G V + + F+ M P N+ + ++ R+G +
Sbjct: 102 ----VRNPVSWAALLTGYARCGRVAEARELFDRM-PDRNVV----SWNAMMSGYLRNGMV 152
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP--------AG 656
A + + MP D +W +++SG K ++ R + L+ L+ HP +G
Sbjct: 153 ERARELFDMMPSRNDV-SWLTMISG--YIKKRRL--REARELFDLSPSHPTSVCNALLSG 207
Query: 657 YVLLS 661
YV LS
Sbjct: 208 YVALS 212
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H + +KTG + + + L+ MY EA+++ K L D V N MI
Sbjct: 403 GKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDTVTWNAMIATYAY 462
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFER-------NPFQN 148
G EA +LF+ M + + ++ +++S G + E YF P +
Sbjct: 463 HGMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRSMQEDWNLTPRSD 522
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
S + G + GF ++A F + + S ++ N + ++ AC D +LG
Sbjct: 523 HYSCMVDLLGRL--GFIYQAYD-FTRKIPSDLQIN--AWETLFSACNAHGDVQLG 572
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 202/621 (32%), Positives = 333/621 (53%), Gaps = 40/621 (6%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L+ H + +Q L LF PE S L++ + K + + + F++ P
Sbjct: 30 LLHHLTELRLPLQAKQLHARLILFSVTPENYLAS--KLVALYSKTNHLAFARYVFDQIPH 87
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE--INDFRLGL 204
+N S+ A + + + +AL LF L S + N ++ + + K+ + ++D +LG
Sbjct: 88 KNTFSYNAMLISYSLHNRHGDALDLFSSLASSNL-VNNISITCLLKSLSSFTLSDVKLGK 146
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V G + + GF+ V V N+LIT K ++DL+R
Sbjct: 147 EVHGFVLRTGFDADVFVENALITYYSKCYDLDLSR------------------------- 181
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVL 323
++FD M +R+ VSW+ MI+ Y+Q G E+ L+R+M +S F+PN VL
Sbjct: 182 ------KVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVL 235
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A + L GM VH ++ +E D+ + NALI LY+KCG R +FD + EKD
Sbjct: 236 QACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDE- 294
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V++ ++I G L+G ++++ ELF M + +W+A+I+G +++ + + V + EM
Sbjct: 295 --VTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQ 352
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G PN T SSVL A +SL+ GK++H IK+G+ ++++ TA+ D YAKSG +
Sbjct: 353 ALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLR 412
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
++RVFD+ D++ + WT ++ A G A ++ LF EM K I P+ +T +VL AC+
Sbjct: 413 GAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAACA 472
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H G+VDK + F SM Y I+P HY CVV L ++ RLSEA++F++ MP EP + W
Sbjct: 473 HCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFVSKMPIEPSAKVW 532
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL G + ++ + L+++ E+ YV+++N+Y+ AGRW +A VR+ M +
Sbjct: 533 GALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQAGRWKEADEVRERMNKV 592
Query: 684 GLRKSGGCSWVEVRNQVHFFF 704
GL+K G SW+E + F
Sbjct: 593 GLQKIPGSSWIETSEGLRSFI 613
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 244/533 (45%), Gaps = 77/533 (14%)
Query: 26 CLLKDITSQNL--VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN 83
CLLK ++S L V G+ +HG +++TG
Sbjct: 129 CLLKSLSSFTLSDVKLGKEVHGFVLRTGFDA----------------------------- 159
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
D+ V N +I + +L+ ++++FD M +R+ VSW ++ISG+ + G E+ +
Sbjct: 160 --DVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDC-----K 212
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
++ ++ + SG +PN VT S+ +AC + D G
Sbjct: 213 TLYREMVDF-------------------------SGFRPNGVTVVSVLQACGQTQDLAFG 247
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ V I E +SVCN+LI L K G +D AR +FD M ++D V++ I+ +
Sbjct: 248 MEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLH 307
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G + ++ +F M + +W+ +I Q+ E L R+M F+PN S VL
Sbjct: 308 GYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVL 367
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
S +A +L+ G +H++ +KIG ++++++ A+ID+Y+K G + + VFD KD +
Sbjct: 368 STIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQ--SKDRS 425
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVF 439
V+ W ++I Y ++G A LF M K+ + V+++A+++ D + +F
Sbjct: 426 LVI-WTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIF 484
Query: 440 NEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
M G P ++ V+ A L + K+ + K+ + AL +
Sbjct: 485 ESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEF---VSKMPIEPSAKVWGALLHGASI 541
Query: 499 SGDIESSRRVFD---RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
S D+E + V D + +N ++ +M +++G KE+ + E M K +
Sbjct: 542 SSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQAGRWKEADEVRERMNKVGL 594
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 291/545 (53%), Gaps = 71/545 (13%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
A++ + GV + +T+S + K C+ + G V IF G+E + V N+L
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTL-- 96
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
L+++++ L EA +FDEMPERN VSW+ M
Sbjct: 97 -----------------------------LNMYVKFNLLEEAEDLFDEMPERNVVSWTTM 127
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y+ ++A + M R +PN +S VL A L LR +H ++K G+
Sbjct: 128 ISAYSNK-LNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGL 183
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E DVF+ +ALID+YSK W+ + G+
Sbjct: 184 ESDVFVRSALIDVYSK------------------------WSDLDNALGV---------- 209
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD MP R+ V W++II G+ ++ + +F M +G + +++T +SVL A +A L
Sbjct: 210 FDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALL 269
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E G+ +H ++K F D+ L AL D Y K G +E + F RM +K+ ISW+ MV GL
Sbjct: 270 ELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGL 327
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++GY+++++ LFE M+++ PN +T+L VLFACSH+GLV+KG YF SM+ ++ + P
Sbjct: 328 AQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPG 387
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C++D+L R+GRL EA I+ M EPDS W +LL C+ ++N +A A K +
Sbjct: 388 REHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKII 447
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L E Y+LLSNIYA+ RW D VRK MT +G+RK+ GCSW+EV Q+H F
Sbjct: 448 ELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGD 507
Query: 708 DHNPK 712
+PK
Sbjct: 508 TSHPK 512
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 217/512 (42%), Gaps = 108/512 (21%)
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
++E + + D + ++ C +Q G G + V T L++ ++K
Sbjct: 45 AMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNT-LLNMYVKF 103
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
+EE+ F+ P +NV+SWT I + N + +ALK + + GV+PN T+SS+
Sbjct: 104 NLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFTYSSVL 162
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
+AC + + R + I K G E V V ++LI
Sbjct: 163 RACDGLPNLR---QLHCGIIKTGLESDVFVRSALI------------------------- 194
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
DV+ + DL A +FDEMP R+ V W+ +I + Q+ EA LF++M R
Sbjct: 195 ------DVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAG 248
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
F + + + VL A L L G VH HVLK ++D+ ++NALID+Y KCG +D
Sbjct: 249 FLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDAN 306
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
F +VEKD V+SW++M+ G NG +A ELF++M +
Sbjct: 307 SAFSRMVEKD---VISWSTMVAGLAQNGYSRQALELFESMKE------------------ 345
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
SG PN T VL A + H +++ G+ Y
Sbjct: 346 -------------SGSRPNYITVLGVLFACS-----------HAGLVEKGWYY------- 374
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
S +++F P + + ++ L +G E++ L EME P+
Sbjct: 375 ----------FRSMKKLFGVDPGREH--YGCLIDLLGRAGRLDEAVKLIHEME---CEPD 419
Query: 552 ELTILSVLFACSHSGLVDKGL---KYFNSMEP 580
+T ++L AC VD + K +EP
Sbjct: 420 SVTWRTLLGACRVHRNVDLAIYAAKKIIELEP 451
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 39/256 (15%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R LH +IKTG+ + ++ + L+ +Y A + ++ DLVV N +I Q
Sbjct: 172 RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQN 231
Query: 101 GNLEEAQRLFDGMP-------------------------------------ERNEVSWTA 123
+ EA LF M +++ + A
Sbjct: 232 SDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNNA 291
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K G +E++ F R ++VISW+ + G QNG+S +AL+LF + ESG +PN
Sbjct: 292 LIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPN 351
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+T + AC+ G F + K G + LI L + G +D A +
Sbjct: 352 YITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLI 411
Query: 243 DRME-KRDVVSWTVIL 257
ME + D V+W +L
Sbjct: 412 HEMECEPDSVTWRTLL 427
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 431 QFDLVFAV--FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
Q+DL A+ + M G + T+S ++ ++ ++++GK +H I G+ +F+
Sbjct: 33 QWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFV 92
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
L + Y K +E + +FD MP++N +SWT M+ + +++ M + +
Sbjct: 93 VNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILMFREGV 151
Query: 549 TPNELTILSVLFACS--------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
PN T SVL AC H G++ GL E ++ + ++D+ S+
Sbjct: 152 RPNMFTYSSVLRACDGLPNLRQLHCGIIKTGL------ESDVFVR------SALIDVYSK 199
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSG 629
L A + MP D W S++ G
Sbjct: 200 WSDLDNALGVFDEMPTR-DLVVWNSIIGG 227
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 189/507 (37%), Positives = 279/507 (55%), Gaps = 11/507 (2%)
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
+G + V +SL+ +++G ARSVFDRM +++VV W+ ++ + GD A +
Sbjct: 46 SGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGL 105
Query: 273 FDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
++M E N ++W+ +++ N+SG +A +M F P+ + S LSA+
Sbjct: 106 LEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGD 165
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+K + G VH +V+K G D + ALID+Y KCG + VF DVA S
Sbjct: 166 VKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVA---SC 222
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
N+++ G N Q+ EA LF R N VSW++I++ +++ + +F M
Sbjct: 223 NALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQS 282
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G PN T VL A A+VA+L G+ H ++ GF +DV++G+AL D YAK G
Sbjct: 283 IGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARH 342
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R +FD MP +N +SW M+ G A G A ++ LF M+K P+ +T VL ACS
Sbjct: 343 ARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQ 402
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+GL ++G +YFN M+ + I P HY C+V +L RSG+L EA D IN MPFEPDS W
Sbjct: 403 AGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWG 462
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
SLL C+ Y N +AE A + L++L + YVLLSNIYAS W VR M G
Sbjct: 463 SLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMG 522
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNP 711
L+K GCSW+E++N+VH + +P
Sbjct: 523 LKKEKGCSWIEIKNKVHMLLAGDNSHP 549
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 176/351 (50%), Gaps = 12/351 (3%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
++L A +V L D V + ++++ I+ G A+ +FD MPE+N V W+ALI+G+
Sbjct: 37 RALHAAAVVSGL-AEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSA 95
Query: 131 HGRVEESMWYFER----NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G E + E+ NVI+W + G ++G + +A+ +++ G P+
Sbjct: 96 RGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATG 155
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
S A ++ + +G V G + KAG V +LI + K G D VF
Sbjct: 156 VSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESS 215
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFR 302
DV S ++ + EA +F E E N VSW+ ++A Q+G EA
Sbjct: 216 HMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVD 275
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR M +PN+ VL A A++ AL G H L+ G DV++ +AL+D+Y+
Sbjct: 276 LFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYA 335
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
KCG+ + R +FD++ ++ VVSWN+MIGGY ++G A +LF +M K
Sbjct: 336 KCGKARHARTIFDAMPSRN---VVSWNAMIGGYAMHGDAANAVQLFCSMQK 383
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 141/298 (47%), Gaps = 13/298 (4%)
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L+ + SF P+ ++ SAL S A +HA + G+ +D F++++L+ Y
Sbjct: 7 LYHFLRHVSFPPDPH---LLPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYI 63
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVS 418
+ G T R VFD + EK+ VV W+++I GY G E A L + M + N ++
Sbjct: 64 RLGATGAARSVFDRMPEKN---VVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVIT 120
Query: 419 WSAIISGY-LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
W+ ++SG + D V A+ M G P+ + S L A V + GK +HG +
Sbjct: 121 WNGLVSGLNRSGRALDAVTALV-RMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYV 179
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+K G D + TAL D Y K G + RVF + S +V GL+ + E++
Sbjct: 180 VKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEAL 239
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
LF E + N ++ S++ C +G + + F +M+ I ++PN CV+
Sbjct: 240 LLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSI-GVEPNSVTIPCVL 296
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 40/311 (12%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C L + V G+ +HG+++K G + + T L+ MY K A+EIV
Sbjct: 158 CALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMY---GKCGRADEIV------ 208
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE--- 142
R+F + S AL++G ++ +V E++ F
Sbjct: 209 ----------------------RVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFI 246
Query: 143 -RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
R NV+SWT+ + VQNG EA+ LF + GV+PN VT + A A +
Sbjct: 247 CRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALM 306
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G S + GF V V ++L+ + K G+ AR++FD M R+VVSW ++ +
Sbjct: 307 HGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYA 366
Query: 262 EMGDLGEARRIFDEMPERNE----VSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNT 316
GD A ++F M + + V+++ ++ +Q+G EE R F +M + + P
Sbjct: 367 MHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRM 426
Query: 317 SCFSIVLSALA 327
++ +++ L
Sbjct: 427 EHYACMVTLLG 437
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 87/237 (36%), Gaps = 64/237 (27%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C+L + ++ GR+ H ++ G + Y+ + L+ MY
Sbjct: 291 TIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMY---------------- 334
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G A+ +FD MP RN VSW A+I G+ HG
Sbjct: 335 ---------------AKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGD--------- 370
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ A++LF + + KP+ VTF+ + AC++
Sbjct: 371 ----------------------AANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEE 408
Query: 203 GLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVIL 257
G F + + G + ++TL + G++D A + + M + D W +L
Sbjct: 409 GRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLL 465
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 313/594 (52%), Gaps = 68/594 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI + K GR++ + FE + +SW + I G+V+ G + E L+L +K+L G+
Sbjct: 81 SLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNL 140
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N S KAC + F + L ++K+G +DL
Sbjct: 141 NSYALGSALKACG-----------------SNFSSSIECGKMLHGCAVKLG-LDL----- 177
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ-----SGYP 297
DVV T +LD + ++GDL +A +IF MP+ N V ++ MIA + Q +
Sbjct: 178 ------DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFA 231
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EA LF +M KP+ FS +L A ++++A G +HA + K ++ D FI NAL
Sbjct: 232 NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNAL 291
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
++LYS L+G +E+ + F + PK + V
Sbjct: 292 VELYS----------------------------------LSGSIEDGLKCFHSTPKLDVV 317
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW+++I G++++ QF+ +F+E+L SG P++ T S +L A A++A+++ G+ +H
Sbjct: 318 SWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYA 377
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK G + + YAK GDI+S+ F + + +SW+VM+ A+ G AKE++
Sbjct: 378 IKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAV 437
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
+LFE M+ + I PN +T L VL ACSH GLV++GL+YF M+ + I PN +H C+VD+
Sbjct: 438 DLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDL 497
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L R+GRL+EAE FI FE D W SLLS C+ +K +R + + +L E A Y
Sbjct: 498 LGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASY 557
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
VLL NIY AG + A +R LM ++G++K G SW+EV N VH F +P
Sbjct: 558 VLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHP 611
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 226/494 (45%), Gaps = 80/494 (16%)
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +NV+SW + I G+ Q GF E + LF + S ++ ++ TFS+ C D RLG
Sbjct: 2 PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 61
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ LI +G V + NSLI + K G +D AR VF+ ++ D VSW
Sbjct: 62 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSW----------- 110
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ +IA Y + G +E RL +M R+ N+ L
Sbjct: 111 --------------------NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALK 150
Query: 325 ALAS--LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
A S ++ G +H +K+G++ DV + AL+D Y+K G+ +D +F + + +
Sbjct: 151 ACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPN- 209
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VV +N+MI G+ QME + F N +F EM
Sbjct: 210 --VVMYNAMIAGF---LQMETMADEFANE-----------------------AMYLFFEM 241
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G P++ TFSS+L A +++ + E GK +H +I K D F+G AL + Y+ SG I
Sbjct: 242 QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSI 301
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
E + F P + +SWT ++ G ++G + + LF E+ + P+E TI +L AC
Sbjct: 302 EDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSAC 361
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFE- 617
++ V G + Y IK ++T + + M ++ G + A +M F+
Sbjct: 362 ANLAAVKSGEQIH-----AYAIKTGIGNFTIIQNSQICMYAKCGDIDSA-----NMTFKE 411
Query: 618 ---PDSNAWASLLS 628
PD +W+ ++S
Sbjct: 412 TKNPDIVSWSVMIS 425
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 176/361 (48%), Gaps = 43/361 (11%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MP+RN VSW+ +I+ Y Q G+ E LF++ + + FS LS LR G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+HA + G+ V ++N+LID+Y KCG + W
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGR-------------------IDW------- 94
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
A+ +F++ + + VSW+++I+GY+ D + + +ML G N
Sbjct: 95 --------ARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALG 146
Query: 456 SVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
S L C S +S+E GK LHG +KLG DV +GTAL DTYAK GD+E + ++F MP
Sbjct: 147 SALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP 206
Query: 514 DKNEISWTVMVRGLAE-----SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
D N + + M+ G + +A E++ LF EM+ + P+E T S+L ACS
Sbjct: 207 DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAF 266
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ G K ++ YN++ + +V++ S SG + + +S P + D +W SL+
Sbjct: 267 ECG-KQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIV 324
Query: 629 G 629
G
Sbjct: 325 G 325
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 186/467 (39%), Gaps = 68/467 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ LHG +K G+ + + T LL Y +A +I K + ++V++N MI +Q
Sbjct: 163 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 222
Query: 100 WGNL-----EEAQRLFDGMPER-------------------------------------- 116
+ EA LF M R
Sbjct: 223 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 282
Query: 117 -NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+E AL+ + G +E+ + F P +V+SWT+ I G VQNG L LF +L
Sbjct: 283 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 342
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
L SG KP+E T S + ACA + + G + K G + NS I + K G++
Sbjct: 343 LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDI 402
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARY 291
D A F + D+VSW+V++ + G EA +F+ M N +++ ++
Sbjct: 403 DSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 462
Query: 292 NQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIE 348
+ G EE R F M + + PN + ++ L R+G A ++ G E
Sbjct: 463 SHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLG-----RAGRLAEAESFIMDSGFE 517
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D + +L+ T G+ V + ++E + S+ + Y G A E+
Sbjct: 518 GDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIR 577
Query: 409 DNMPKRN-----DVSW-------SAIISGYLEHKQFDLVFAVFNEML 443
+ M R +SW + ++G H +++ EML
Sbjct: 578 NLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEML 624
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V G +H + IKTGI + + MY AN K+ D+V + MI++
Sbjct: 367 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 426
Query: 97 NIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFE----RNPFQN 148
N Q G +EA LF+ M N +++ ++ G VEE + YFE +
Sbjct: 427 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 486
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ +A I + + F +++SG + + V + S+ AC
Sbjct: 487 NVKHSACIVDLLGRAGRLAEAESF--IMDSGFEGDPVMWRSLLSAC 530
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 292/535 (54%), Gaps = 9/535 (1%)
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
S + P +SS+ C +LG + K + N LI K +
Sbjct: 8 SSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQS 67
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A VF + ++ SW +I+ + G EA + D+MP+ N VS++ +I+ G+
Sbjct: 68 AHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFR 127
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
+E+ +F+ M + F++V + + ASL A VH + IG+ ++ I N
Sbjct: 128 KESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGN 187
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
ALID Y KCGE +F + E+DV VSW SM+ Y ++E+A LF M ++N
Sbjct: 188 ALIDAYGKCGEPDISFSIFSRMPERDV---VSWTSMVAAYAQASRLEDAHWLFSQMQEKN 244
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
VSW+A+I+G+ ++ + D +F +M G P+ TF+SVL A A +A + +GK++HG
Sbjct: 245 TVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHG 304
Query: 476 KIIK---LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
II+ + + ++F+ AL D Y K G + S+ +F M +K+ +SW ++ G A++G+
Sbjct: 305 HIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGH 364
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
+ES+ +FE M + I PN +T L +L AC H+GLV +GL+ +SME Y + P HY
Sbjct: 365 GEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYA 424
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDS-NAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
++D+L R+ RL EA I P D W +LL C+ + N +A RA + L++L
Sbjct: 425 IMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEP 484
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
+ A YV++ NIYA+A RW +A VR+LM E+GLRK CSW+EVRN H F K
Sbjct: 485 GNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVAK 539
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 206/411 (50%), Gaps = 47/411 (11%)
Query: 7 SLFSINP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
+L S++P ++S I C IT+++L + G+ LH H IKT + +L RL+
Sbjct: 6 TLSSLDPAHQHYSSLISKC------ITTRHLKL-GKLLHSHFIKTALIFTTFLANRLIDF 58
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y A+++ L + N +I+A + G EA L D MP+ N VS+ +LI
Sbjct: 59 YSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLI 118
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--SGVKPN 183
SG H GF E+L +F +L+ S V +
Sbjct: 119 SGLGHH-------------------------------GFRKESLNVFKTMLKQCSNVLFD 147
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E T S+ +CA + L V G G ++ + N+LI K GE D++ S+F
Sbjct: 148 EFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFS 207
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
RM +RDVVSWT ++ + + L +A +F +M E+N VSW+ +IA + Q+G +EA L
Sbjct: 208 RMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHL 267
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK---IGIEKDVFISNALIDL 360
F QM P+ F+ VLSA A L + G +H H+++ I ++FI NALID+
Sbjct: 268 FEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDM 327
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
Y KCG+ + +F + EKD +VSWNS+I G+ NG EE+ +F+ M
Sbjct: 328 YCKCGQMRSATTLFKGMHEKD---IVSWNSLITGFAQNGHGEESLAVFERM 375
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 169/362 (46%), Gaps = 49/362 (13%)
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
T S P +S ++S + + L+ G +H+H +K + F++N LID YSKC
Sbjct: 6 TLSSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSI 65
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
+ VF + K+ SWN +I Y +G EA L D MPK N VS++++ISG
Sbjct: 66 QSAHKVFHVLPVKNTH---SWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLG 122
Query: 428 EHKQFDLVFAVFNEML--LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
H VF ML S + ++ T S++ + AS+ + E + +HG I +G +
Sbjct: 123 HHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSN 182
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMP-------------------------------D 514
+ +G AL D Y K G+ + S +F RMP +
Sbjct: 183 IIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQE 242
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
KN +SWT ++ G A++G E+++LFE+M + I P+ T SVL AC+ L+ +G +
Sbjct: 243 KNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEI 302
Query: 575 FNSMEPIYNIKPNGRHYTC-------VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ I+ Y C ++DM + G++ A M E D +W SL+
Sbjct: 303 HGHI-----IRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGM-HEKDIVSWNSLI 356
Query: 628 SG 629
+G
Sbjct: 357 TG 358
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 156/290 (53%), Gaps = 16/290 (5%)
Query: 63 LIMYLGSRKSLEANEIVKDLNGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMP 114
L+ +GS SL A E+++ ++G ++++ N +I+A + G + + +F MP
Sbjct: 151 LVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMP 210
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
ER+ VSWT++++ + + R+E++ W F + +N +SWTA I GF QNG EAL LF +
Sbjct: 211 ERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQ 270
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA---GFEKHVSVCNSLITLSLK 231
+ E G+ P+ TF+S+ ACA++ G + G I ++ + ++ + N+LI + K
Sbjct: 271 MREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCK 330
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVM 287
G++ A ++F M ++D+VSW ++ F + G E+ +F+ M E N V++ +
Sbjct: 331 CGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGL 390
Query: 288 IARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGM 336
++ +G E R+ M + Y P + ++I++ L L M
Sbjct: 391 LSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAM 440
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 39/285 (13%)
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
V NE L S + P +SS++ + L+ GK LH IK + FL L D Y+
Sbjct: 2 VLNETLSSLD-PAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYS 60
Query: 498 KSGDIESSRRVFDRMPDKNEISWTV-------------------------------MVRG 526
K I+S+ +VF +P KN SW + ++ G
Sbjct: 61 KCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISG 120
Query: 527 LAESGYAKESINLFEEMEK--TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
L G+ KES+N+F+ M K +++ +E T++S++ +C+ G + L+ + I +
Sbjct: 121 LGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLG-APELLRQVHGAAIIIGL 179
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
N ++D + G + + MP E D +W S+++ Y E A
Sbjct: 180 NSNIIIGNALIDAYGKCGEPDISFSIFSRMP-ERDVVSWTSMVAA---YAQASRLEDAHW 235
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
++ E++ + L +A GR +A+++ + M E+G+ S
Sbjct: 236 LFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSA 280
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 210/724 (29%), Positives = 346/724 (47%), Gaps = 104/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L QGR +H + K G E + L+ +YL A + ++ D
Sbjct: 149 VLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCD 208
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PE------------------------- 115
V N +I+ + Q GN E A +F+ M P+
Sbjct: 209 RVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHS 268
Query: 116 ---RNEVSWTALISG-----FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
+ +S +I G ++K G + E++ F+ NV+ W + + Q +
Sbjct: 269 YLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAK 328
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ LF +++ +GV+PNE T+ + + C + LG + L K GFE + V
Sbjct: 329 SFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSG---- 384
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
V++D++ + G L +ARRI + + ++ VSW+ M
Sbjct: 385 ---------------------------VLIDMYSKYGWLDKARRILEVLEAKDVVSWTSM 417
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q + +EA F+ M + P+ + +SA A +KA+R G +H+ V G
Sbjct: 418 IAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGY 477
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV I WN+++ Y G+ +EA L
Sbjct: 478 SADVSI----------------------------------WNALVNLYARCGRSKEAFSL 503
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ + ++ ++W+ ++SG+ + ++ VF +M +G N TF S + ASA++A +
Sbjct: 504 FEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADI 563
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +H +IK G + + AL Y K G IE ++ F M ++N +SW ++
Sbjct: 564 KQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSC 623
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ G+ E+++LF++M++ + PN++T + VL ACSH GLV++GL YF SM + I P
Sbjct: 624 SQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPR 683
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CVVD+L R+G+L A F+ MP ++ W +LLS C+ +KN +I E A K L
Sbjct: 684 PDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLL 743
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L A YVLLSN YA G+W +VRK+M ++G+RK G SW+EV+N VH FF
Sbjct: 744 ELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGD 803
Query: 708 DHNP 711
+P
Sbjct: 804 RLHP 807
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 264/568 (46%), Gaps = 79/568 (13%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
A+ + G+ E + ++ LI + K G V+ + FE+ ++ +SW A + G+ +NG
Sbjct: 65 HAKAITCGLGE-DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
EA+ L+ ++ SGV P SS+ AC + F G V ++K G V N+
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
LI L L+ G + LA V F EMP + V++
Sbjct: 184 LIALYLRFGSLSLAERV-------------------------------FSEMPYCDRVTF 212
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ +I+R+ Q G E A +F +M + P+ + +L+A AS+ L G +H+++LK
Sbjct: 213 NTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLK 272
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
G+ D I +L+DLY KCG + +F S D +VV WN M+ YG
Sbjct: 273 AGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS---GDRTNVVLWNLMLVAYG-------- 321
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+ +D++ K FDL F +M+ +G PN+ T+ +L
Sbjct: 322 --------QISDLA-----------KSFDL----FCQMVAAGVRPNEFTYPCLLRTCTYA 358
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+ G+ +H IK GF D+++ L D Y+K G ++ +RR+ + + K+ +SWT M+
Sbjct: 359 GEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMI 418
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G + + KE++ F++M+ I P+ + + S + AC+ + +G + +S +
Sbjct: 419 AGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG-QQIHSRVYVSGY 477
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + +V++ +R GR EA ++ + D W ++SG + + E A++
Sbjct: 478 SADVSIWNALVNLYARCGRSKEAFSLFEAIEHK-DKITWNGMVSG---FAQSGLYEEALE 533
Query: 645 NLWKLAEEHPAG-----YVLLSNIYASA 667
K+ + AG + +S+I ASA
Sbjct: 534 VFIKM---YQAGVKYNVFTFVSSISASA 558
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/565 (24%), Positives = 241/565 (42%), Gaps = 115/565 (20%)
Query: 7 SLFSINPETSFNSYIETCLC---LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
S I E + + C+ LL S + +G+ LH +L+K G+ + + LL
Sbjct: 227 SALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLL 286
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM----PERNEV 119
+Y+ +EA EI K + ++V+ N M+ A Q +L ++ LF M NE
Sbjct: 287 DLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEF 346
Query: 120 SWTAL------------------------------ISG-----FMKHGRVEESMWYFERN 144
++ L +SG + K+G ++++ E
Sbjct: 347 TYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVL 406
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
++V+SWT+ I G+VQ+ F EAL+ F + G+ P+ + +S ACA I R G
Sbjct: 407 EAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQ 466
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ ++ +G+ VS+ N+L+ L + G A S+F+ +E +D ++W
Sbjct: 467 QIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITW----------- 515
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ M++ + QSG EEA +F +M + K N F +S
Sbjct: 516 --------------------NGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSIS 555
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A+L ++ G +HA V+K G + ++NALI LY KCG +D ++ F + E++ H
Sbjct: 556 ASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERN--H 613
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VSWN++I +G EA +LFD M +
Sbjct: 614 -VSWNTIITSCSQHGWGLEALDLFDQMKQE------------------------------ 642
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSG 500
G PN TF VL A + V +E+G G + + + + D ++G
Sbjct: 643 -GLKPNDVTFIGVLAACSHVGLVEEGL---GYFKSMSSEHGIHPRPDHYACVVDILGRAG 698
Query: 501 DIESSRRVFDRMP-DKNEISWTVMV 524
++ +R+ + MP N + W ++
Sbjct: 699 QLDRARKFVEEMPVSANAMVWRTLL 723
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 146/323 (45%), Gaps = 46/323 (14%)
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVL-SALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
PE+ LF R + F+ L S+K +HA + G+ +D N
Sbjct: 22 PEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGN 81
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
LIDLY+K G ++ A+ +F+ + R+
Sbjct: 82 LLIDLYAK----------------------------------KGLVQRARRVFEQLSARD 107
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
+VSW A++SGY + + ++++M SG +P SSVL A A E+G+ +H
Sbjct: 108 NVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHA 167
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
++ K G + +G AL Y + G + + RVF MP + +++ ++ A+ G +
Sbjct: 168 QVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGES 227
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN-----SMEPIYNIKPNGRH 590
++ +FEEM + TP+ +TI S+L AC+ G ++KG + + M P Y I+ +
Sbjct: 228 ALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGS--- 284
Query: 591 YTCVVDMLSRSGRLSEAEDFINS 613
++D+ + G + EA + S
Sbjct: 285 ---LLDLYVKCGVIVEALEIFKS 304
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLE 468
M +R S + ++G+L H+ + + ++F + F+ L C SV
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALREC-RGSVKHWP 59
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
+H K I G D G L D YAK G ++ +RRVF+++ ++ +SW M+ G A
Sbjct: 60 LVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYA 119
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG----LKYFNSMEPIYNI 584
+G +E++ L+ +M + + P + SVL AC+ + L ++G + + +
Sbjct: 120 RNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV 179
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
N ++ + R G LS AE + MP+
Sbjct: 180 VGNA-----LIALYLRFGSLSLAERVFSEMPY 206
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 186/477 (38%), Positives = 272/477 (57%), Gaps = 29/477 (6%)
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP-NTSCFSIVL 323
DL AR +FDE+P + W+ MI Y S P+E+ LF QM P ++ S+V+
Sbjct: 53 DLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVI 112
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV- 382
A LK +G +H VLKIG+ D+F+ ALI++Y+K G+ + R + D + D+
Sbjct: 113 QACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLV 172
Query: 383 -----------------AH----------VVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
AH +VSWN+MI G+ G + AK+LFD +R+
Sbjct: 173 PYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERD 232
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
+SWS++I+ Y + +Q + +F+EM L+ +P+K T SVL A V +L GK +H
Sbjct: 233 LISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHE 292
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
I + D+ LGT+L D YAK GDI++S RVF+ M +++ +W+ M+ GLA G+ +
Sbjct: 293 CIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGEL 352
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
+++ F +M I PN++T + VL ACSH GLVD+G YF SM +Y++ P HY CVV
Sbjct: 353 ALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVV 412
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
D+L R+GRL EA + I SMPF PD+ W +LL C+ YKN +IAE A NL +L
Sbjct: 413 DILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDG 472
Query: 656 GYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YVLLSNIY+ A W +NVR++M ++K G S +EV N VH F +P+
Sbjct: 473 NYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPE 529
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 194/412 (47%), Gaps = 51/412 (12%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
+ LL++ T N +IQ +H +IKT + ++ +LL +
Sbjct: 7 MSLLQNATKLNQIIQ---IHALIIKTSLDGNNFVLAKLLRRLFACSSA------------ 51
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
+L A+ +FD +P + W +I ++ +ESM F +
Sbjct: 52 ----------------NDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQM 95
Query: 145 PFQNVI-------SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
Q I S CG +++ + + KL ++L+ G+ + +++ + A+
Sbjct: 96 RHQECIPIDSYSLSLVIQACGRLKDPGNGQ--KLHTQVLKIGLGSDLFVETALIEMYAKF 153
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
D + ++ + + N L+ +++GE++LA +FDRM +RD+VSW ++
Sbjct: 154 GDIEIARNILDEMAHPDLVPY----NVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMI 209
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+GD+G A+++FD ER+ +SWS MIA Y ++ EA RLF +M + P+
Sbjct: 210 HGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKV 269
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
VLSA + AL G +H + + IE D+ + +L+D+Y+KCG+ + VF+ +
Sbjct: 270 TMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGM 329
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISG 425
+D V +W++MI G +G E A + F M K NDV++ ++S
Sbjct: 330 NNRD---VFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSA 378
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 204/451 (45%), Gaps = 49/451 (10%)
Query: 8 LFSINPETSFNSYIET--CLCLLKDITSQNLVIQ----------GRALHGHLIKTGIHKE 55
L S NP+ S + + + C+ D S +LVIQ G+ LH ++K G+ +
Sbjct: 80 LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139
Query: 56 RYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE 115
++ T L+ MY A I+ ++ DLV +N ++ ++ G + A LFD MPE
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE 199
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
R+ VSW +I G G V + F+R +++ISW++ I + + S EAL+LF ++
Sbjct: 200 RDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEM 259
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
+ V P++VT S+ AC ++ +G + H + + I + LK+G
Sbjct: 260 QLANVLPDKVTMVSVLSACGDVGALGMGKMI-----------HECIERNRIEIDLKLG-- 306
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
T ++D++ + GD+ + R+F+ M R+ +WS MI G
Sbjct: 307 ------------------TSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHG 348
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI-GIEKDVFIS 354
+ E A F +M KPN F VLSA + + + G + K+ + +
Sbjct: 349 FGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHY 408
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN---M 411
++D+ + G ++ + S+ A + W +++G + +E A+E N +
Sbjct: 409 GCVVDILGRAGRLQEAMELIKSMPFAPDA--IVWRALLGACRIYKNVEIAEEATVNLLEL 466
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
D ++ + + Y + K++D V V M
Sbjct: 467 EPHVDGNYVLLSNIYSQAKEWDKVVNVRRMM 497
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 35/191 (18%)
Query: 473 LHGKIIKLGFPYDVF-LGTALTDTYAKSG--DIESSRRVFDRMPDKNEISWTVMVRGLAE 529
+H IIK + F L L +A S D+ +R VFD +P + W M+R
Sbjct: 22 IHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLN 81
Query: 530 SGYAKESINLFEEMEKTSITPNELTILS-VLFACS-----------HSGLVDKGL----- 572
S +ES++LF +M P + LS V+ AC H+ ++ GL
Sbjct: 82 SQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLF 141
Query: 573 ---------KYFNSMEPIYNI-----KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
F +E NI P+ Y ++ R G ++ A D + MP E
Sbjct: 142 VETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMP-ER 200
Query: 619 DSNAWASLLSG 629
D +W +++ G
Sbjct: 201 DLVSWNTMIHG 211
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 217/700 (31%), Positives = 344/700 (49%), Gaps = 137/700 (19%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
+LRS F N S S + C L +T GR +H +++KTG+ +
Sbjct: 100 NLRSGFRPN-MVSIVSVLPVCAGLEDGVT-------GRQIHCYVVKTGLDSQ-------- 143
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
+ V N +++ + G +++++R+FD + ERN VSW A
Sbjct: 144 -----------------------VTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+I+ S+ Y ERN +AL++F +++ GVKPN
Sbjct: 181 IIT----------SLAYLERNQ---------------------DALEMFRLMIDGGVKPN 209
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
VTFSS+ E+ F G + G + G E + V N+LI + K G RS+
Sbjct: 210 SVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSG-----RSL-- 262
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+A +F+++ E+N VSW+ M+A + Q+ A L
Sbjct: 263 ------------------------QASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDL 298
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
RQM PN+ F+ VL A A + LR G +HA ++ G D+F+SNAL D+Y+K
Sbjct: 299 VRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAK 358
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG R VF + R++VS++ +I
Sbjct: 359 CGCLNLARRVF-----------------------------------KISLRDEVSYNILI 383
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
GY + +F EM + G + ++ V+ A A++A+L++GK++HG ++
Sbjct: 384 IGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLH 443
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+F+ AL D Y K G I+ + +VF ++P ++ SW M+ G G +INLFE M
Sbjct: 444 THLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAM 503
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
++ + + ++ ++VL ACSH GLV++G KYF M+ + NIKP HY C+VD+L R+G
Sbjct: 504 KEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQ-VQNIKPTQMHYACMVDLLGRAGL 562
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
+ EA I S+P EPD+N W +LL C+ + ++A A ++L+KL +H Y +LSN+
Sbjct: 563 IEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNM 622
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA AG+W +A VRKLM +G +K+ GCSWV++ NQVH F
Sbjct: 623 YAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAF 662
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/604 (27%), Positives = 269/604 (44%), Gaps = 131/604 (21%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK V +GR +HG + K G + ++ LL+ Y
Sbjct: 13 VLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFY-------------------- 52
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
NC G L++ +R+FD M ER+ VSW ++I F H
Sbjct: 53 ---GNC--------GGLKDVKRVFDEMLERDVVSWNSVIGVFSVH--------------- 86
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLS 205
GF EA+ LF ++ L SG +PN V+ S+ CA + D G
Sbjct: 87 ----------------GFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQ 130
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + K G + V+V N+L+ + K G V +R VFD + +R+ VSW I+ +
Sbjct: 131 IHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYL-- 188
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
ERN ++A +FR M KPN+ FS +L
Sbjct: 189 ------------ERN-----------------QDALEMFRLMIDGGVKPNSVTFSSMLPV 219
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L LK G +H L+ G+E D+F++NALID+Y+K G + VF+ I EK+ +
Sbjct: 220 LVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKN---I 276
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN+M+ + N LE DLV +M
Sbjct: 277 VSWNAMVANFAQN---------------------------RLELAAVDLV----RQMQAD 305
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
GEIPN TF++VL A A + L GK++H + I+ G D+F+ ALTD YAK G + +
Sbjct: 306 GEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLA 365
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
RRVF ++ ++E+S+ +++ G +++ ES+ LF EM + + ++ + V+ AC++
Sbjct: 366 RRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANL 424
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
+ +G K + + ++ + ++D + GR+ A +P D+ +W S
Sbjct: 425 AALKQG-KEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP-SRDTASWNS 482
Query: 626 LLSG 629
++ G
Sbjct: 483 MILG 486
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 187/398 (46%), Gaps = 74/398 (18%)
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV+ ++ TF + KACA+ + G + G++FK GF+ V V N+L+ G +
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+ VFD M +RDVVSW ++ VF + G+
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVF-------------------------------SVHGFYA 90
Query: 299 EAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EA LF +M R F+PN VL A L+ +G +H +V+K G++ V + NAL
Sbjct: 91 EAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNAL 150
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF----DNMPK 413
+D+Y KCG KD R VFD I E++ VSWN++I + ++A E+F D K
Sbjct: 151 VDVYGKCGYVKDSRRVFDEISERN---GVSWNAIITSLAYLERNQDALEMFRLMIDGGVK 207
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
N V++S+++ +E K FD GK++
Sbjct: 208 PNSVTFSSMLPVLVELKLFDF-----------------------------------GKEI 232
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
HG ++ G D+F+ AL D YAKSG + VF+++ +KN +SW MV A++
Sbjct: 233 HGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLE 292
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+++L +M+ PN +T +VL AC+ G + G
Sbjct: 293 LAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPG 330
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 162/351 (46%), Gaps = 37/351 (10%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
F VL A A +++ G +H V K+G + DVF+ N L+ Y CG KD + VFD ++
Sbjct: 10 FPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEML 69
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
E+D VVSWNS+IG + ++G EA LF M R
Sbjct: 70 ERD---VVSWNSVIGVFSVHGFYAEAIHLFCEMNLR------------------------ 102
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
SG PN + SVL A + G+ +H ++K G V +G AL D Y K
Sbjct: 103 ------SGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGK 156
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G ++ SRRVFD + ++N +SW ++ LA ++++ +F M + PN +T S+
Sbjct: 157 CGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSM 216
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L L D G K + + ++ + ++DM ++SGR +A + N + E
Sbjct: 217 LPVLVELKLFDFG-KEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIG-EK 274
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
+ +W ++++ + E A V+ + A+ V +N+ + R
Sbjct: 275 NIVSWNAMVANFAQNRLELAAVDLVRQMQ--ADGEIPNSVTFTNVLPACAR 323
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 303/591 (51%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TA + + K + ++ F P N+ S+ A I G+ +N F+A KLFL+L ++
Sbjct: 297 TATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFS 356
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+EV+ S A A I GL + GL K+ ++ V N+
Sbjct: 357 FDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANA----------------- 399
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
ILD++ + G L EA +FDEM R+ VSW+ +I Q+ +
Sbjct: 400 --------------ILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
F M R +P+ + VL A A +A +GM VH ++K G+ +F+ +AL+D+Y
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMY 505
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKCG MEEA+++ + ++ VSW+A
Sbjct: 506 SKCG----------------------------------MMEEAEKIHYRLEEQTMVSWNA 531
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IISG+ K+ + F+ ML G P+ T+++VL A++A++ GK +H ++IKL
Sbjct: 532 IISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLE 591
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV++ + L D Y+K G++ S +F + P ++ ++W M+ G A G +E++ LFE
Sbjct: 592 LLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFE 651
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M +I PN T +SVL ACSH G KGL YF M IY ++P HY+C+VD+L RS
Sbjct: 652 HMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRS 711
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G++ EA I MPFE D+ W +LLS CK N ++AE+A +L KL E + Y LLS
Sbjct: 712 GQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLS 771
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYA AG W +R+ M L+K GCSW+EV+++VH F +PK
Sbjct: 772 NIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPK 822
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 155/580 (26%), Positives = 273/580 (47%), Gaps = 82/580 (14%)
Query: 82 LNGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
L+GF + V NC+I ++ LE A ++F+ MP+R+ VSW ++ G GR+E +
Sbjct: 52 LSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQA 111
Query: 140 YFERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
F P +V+SW + I G++QNG +++ +FLK+ + GV + T + K C+ +
Sbjct: 112 VFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLE 171
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
D LG+ + G+ + GF+ DVV+ + ++D
Sbjct: 172 DQVLGIQIHGIAVQMGFD-------------------------------YDVVTGSALVD 200
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
++ + L ++ +F E+P++N +SWS IA Q+ +LF++M R + S
Sbjct: 201 MYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQST 260
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++ V + A L A R G +H H LK DV + A +D+Y+KC D +F +
Sbjct: 261 YASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP 320
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+ ++ S+N+MI GY N Q +A +LF + K S+S
Sbjct: 321 DHNLQ---SYNAMIIGYARNEQGFQAFKLFLQLQKN---SFS------------------ 356
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F+E+ LSG L A+A + +G LHG IK ++ + A+ D Y K
Sbjct: 357 FDEVSLSG----------ALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGK 406
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G + + +FD M ++ +SW ++ ++ ++++ F M ++ + P+E T SV
Sbjct: 407 CGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSV 466
Query: 559 LFACSHSGLVDKGLKYF-NSMEPIYNIKPNGRHY-----TCVVDMLSRSGRLSEAEDFIN 612
L AC+ G + F N ME I +G + +VDM S+ G + EAE I+
Sbjct: 467 LKACA-------GQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEK-IH 518
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
E +W +++SG K + ++R ++ ++ E
Sbjct: 519 YRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVE 558
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 215/452 (47%), Gaps = 37/452 (8%)
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
TFS I + C+ + G + +GF V V N LI + +K ++ A VF+ M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLF 304
+RD+VSW ++ G + A+ +F+ MP + VSW+ +I+ Y Q+G +++ +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
+M + + ++ L + L+ G+ +H +++G + DV +AL+D+Y+KC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
+D VF + +K+ +SW++ I G N Q+ +LF M ++
Sbjct: 206 NSLEDSLDVFSELPDKN---WISWSAAIAGCVQNDQLLRGLKLFKEMQRK---------- 252
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
G ++ST++SV + A +++ G LH +K F
Sbjct: 253 ---------------------GIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGS 291
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
DV +GTA D YAK ++ + ++F +PD N S+ M+ G A + ++ LF +++
Sbjct: 292 DVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQ 351
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
K S + +E+++ L A + +GL+ + + N+ N ++DM + G L
Sbjct: 352 KNSFSFDEVSLSGALSAAAVIKGHSEGLQ-LHGLAIKSNLSSNICVANAILDMYGKCGAL 410
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
EA + M D +W ++++ C+ ++E
Sbjct: 411 VEASGLFDEMEIR-DPVSWNAIITACEQNESE 441
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 166/410 (40%), Gaps = 81/410 (19%)
Query: 28 LKDITSQNLVI--------QGRALH--GHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
++D S N +I +G+ L G ++++ + + + +L G R E
Sbjct: 422 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 481
Query: 78 ----IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
I+K G + V + +++ + G +EEA+++ + E+ VSW A+ISGF +
Sbjct: 482 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 541
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
E+S +F +LE GV+P+ T++++
Sbjct: 542 SEDSQRFFSH-------------------------------MLEMGVEPDNFTYATVLDT 570
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CA + LG + + K V + ++L+ + K G + + +F + KRD V+W
Sbjct: 571 CANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTW 630
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+ MI + G EEA LF M + K
Sbjct: 631 -------------------------------NAMICGFAYHGLGEEALELFEHMLHENIK 659
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDG-R 371
PN + F VL A + + + G+ + I +E + + ++D+ + G+ ++ R
Sbjct: 660 PNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALR 719
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
L+ D E D + W +++ + G +E A++ ++ K + SA
Sbjct: 720 LIQDMPFEAD---AIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSA 766
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 134/311 (43%), Gaps = 54/311 (17%)
Query: 29 KDITSQNLVIQGRALH----------GHLIKTGIHKERYLTTRLL-----IMYLGSRKSL 73
+ + S N +I G +L H+++ G+ + + +L + +G K +
Sbjct: 524 QTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQI 583
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
A I +L D+ + + +++ + GN+ ++ +F P+R+ V+W A+I GF HG
Sbjct: 584 HAQMIKLELLS-DVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGL 642
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
E EAL+LF +L +KPN TF S+ +A
Sbjct: 643 GE-------------------------------EALELFEHMLHENIKPNHATFVSVLRA 671
Query: 194 CAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLA-RSVFDRMEKRDVV 251
C+ + + + GL F + E + + ++ + + G+V+ A R + D + D +
Sbjct: 672 CSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAI 731
Query: 252 SWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
W +L + G++ A + + PE + +++++ Y +G ++ ++ + M
Sbjct: 732 IWRTLLSICKIQGNVEVAEKAASSLLKLDPE-DSSAYTLLSNIYADAGMWQQVSKIRQTM 790
Query: 308 TRYSFKPNTSC 318
++ K C
Sbjct: 791 RSHNLKKEPGC 801
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 291/524 (55%), Gaps = 66/524 (12%)
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
SI +ACA D LG +V G KA + CN+L
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTL----------------------- 39
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
LD++ + G L A +FD M R V+W+ +IA Y + G +EA RLF +M
Sbjct: 40 --------LDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMD 91
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
R P+ + VL A A +L +G VH ++ + ++ ++F+ NAL+D+Y+KC
Sbjct: 92 REGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKC---- 147
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
G ME+A +F MP ++ +SW+ +I GY +
Sbjct: 148 ------------------------------GSMEDANSVFLEMPVKDIISWNTMIGGYSK 177
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ + ++F +M+L + P+ +T + +L A AS+ASL++GK++HG I++ GF D +
Sbjct: 178 NSLPNEALSLFGDMVLEMK-PDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQV 236
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL D Y K G +R +FD +P K+ I+WTVM+ G G+ +I F EM + I
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+E++ +S+L+ACSHSGL+D+G ++FN M+ N+KP HY C+VD+L+RSG+L+ A
Sbjct: 297 EPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAY 356
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
FI SMP EPD+ W +LLSGC+ + + ++AE+ +++++L E+ YVLL+N YA A
Sbjct: 357 KFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAE 416
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+W + +R+ + +GL+K+ GCSW+EV+++VH F +P+
Sbjct: 417 KWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQ 460
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 207/508 (40%), Gaps = 70/508 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVH-NCMINANI 98
GRA+HG +K +H + LL MY L+ +V DL VV +I A
Sbjct: 17 GRAVHGSGVKACVHWKTTFCNTLLDMY-AKCGVLDGAILVFDLMSVRTVVTWTSLIAAYA 75
Query: 99 QWGNLEEAQRLFDGMPERNEVS-------------------------------------- 120
+ G +EA RLF M +R VS
Sbjct: 76 REGLSDEAIRLFHEM-DREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNI 134
Query: 121 --WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
AL+ + K G +E++ F P +++ISW I G+ +N EAL LF ++
Sbjct: 135 FVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE 194
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
+KP+ T + I ACA + G V G I + GF V N+L+ + +K G LA
Sbjct: 195 -MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLA 253
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQS 294
R +FD + +D+++WTV++ + G A F+EM E +EVS+ ++ + S
Sbjct: 254 RLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHS 313
Query: 295 GYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDV 351
G +E +R F M + KP ++ ++ LA RSG A+ + + IE D
Sbjct: 314 GLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLA-----RSGKLAMAYKFIKSMPIEPDA 368
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
I AL+ + K V + + E + + + + Y + EE K+L +
Sbjct: 369 TIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKI 428
Query: 412 PKRN-----DVSWSAI-------ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+R SW + ++G H Q + + L ++ + F
Sbjct: 429 GRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKR--LRSKMKEEGYFPKTRY 486
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVF 487
A + SL+K L G KL + +
Sbjct: 487 ALINADSLQKETALCGHSEKLAMAFGIL 514
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 117/305 (38%), Gaps = 75/305 (24%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C+L S + +G+ +HGH+++ G ++ + L+ MY
Sbjct: 201 TLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMY---------------- 244
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++ G A+ LFD +P ++ ++WT +I+G+ H
Sbjct: 245 ---------------VKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMH----------- 278
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
GF A+ F ++ ++G++P+EV+F SI AC+
Sbjct: 279 --------------------GFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDE 318
Query: 203 GLSVFGLI-----FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVI 256
G F ++ K E + + + L + G++ +A M + D W +
Sbjct: 319 GWRFFNVMQDECNVKPKLEHYACI----VDLLARSGKLAMAYKFIKSMPIEPDATIWGAL 374
Query: 257 LDVFIEMGDLGEARRIFD---EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
L D+ A ++ + E+ N + ++ Y ++ EE +L +++ R K
Sbjct: 375 LSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLK 434
Query: 314 PNTSC 318
N C
Sbjct: 435 KNPGC 439
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 199/609 (32%), Positives = 318/609 (52%), Gaps = 43/609 (7%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
AQ L G+P + T LI + ++ + + ++ P SW + I + +G
Sbjct: 19 HAQTLIHGLPLQ-----THLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGS 73
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
+L L+LK+L S KP+ TF + KAC+ + G + + + GF + VCNS
Sbjct: 74 PQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNS 133
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVS 283
LI + K +D AR+ +D M RD VSW I+ +++ G + +AR +F+EMP RN V
Sbjct: 134 LIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVC 193
Query: 284 WSVMIARYNQSGYPEEAFRLFRQM--TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
W+ MI Y + G E LFRQM + +PN + +LSA ++L G +
Sbjct: 194 WTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVF 253
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+ I + + ALID+YSKCG+ +
Sbjct: 254 IDVNKIPLNTILVTALIDMYSKCGD----------------------------------V 279
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
E+A +FD + +N SW+AII+G ++ + ++ M PN+ T +VL A
Sbjct: 280 EKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSAC 339
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A + +LE G+++H + + G +V L TAL D YAK G I+ + +F + +K+ W
Sbjct: 340 AGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWN 399
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M+ GLA G ++S+ +F +M + + PN++T + VL AC+HSGLV++G F+SM
Sbjct: 400 AMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADK 459
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
+ + P HY C+VD+L R+G L EA + + +M PDS W +LLS C+ ++N ++A++
Sbjct: 460 HGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADK 519
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
+ + + + +LLSNIYAS+GRW D VR+ + EK ++K GCSWVEV VH
Sbjct: 520 ISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVH 579
Query: 702 -FFFQKTDH 709
F + T H
Sbjct: 580 RFVVEDTTH 588
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/546 (27%), Positives = 238/546 (43%), Gaps = 146/546 (26%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK ++ V++G +H H+++ G G D
Sbjct: 99 VLKACSTLGSVLEGEQIHTHVLRLGF-------------------------------GSD 127
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V N +I+ + L+ A+ +D M R+EVSW ++ISG+++ G+VE++ FE P
Sbjct: 128 LFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPM 187
Query: 147 Q-NVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEINDFRLG 203
+ NV+ WTA I G+ + G E L LF ++L S V+PN T + AC+ + ++ +G
Sbjct: 188 RRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVG 247
Query: 204 --LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
LSVF + + ++ L + + T ++D++
Sbjct: 248 RFLSVF----------------------IDVNKIPL-----------NTILVTALIDMYS 274
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ GD+ +A RIFD + +N SW+ +I Q G EEA L+R M S KPN
Sbjct: 275 KCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVN 334
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLSA A L AL G VH ++ + G++ +V ++ AL+D+Y+KCG+ D L+F EKD
Sbjct: 335 VLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKD 394
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
VA WN+MI G +G ++ AVF++
Sbjct: 395 VA---LWNAMILGLAYHGDGRDS-------------------------------LAVFSQ 420
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M+ +G PN TF VL A SG
Sbjct: 421 MVRAGVQPNDVTFIGVLSAC-----------------------------------NHSGL 445
Query: 502 IESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
+E R F M DK+ +S + MV L +G+ KE+ L + M I P+ +
Sbjct: 446 VEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNM---LIPPDSIIWG 502
Query: 557 SVLFAC 562
++L AC
Sbjct: 503 ALLSAC 508
>gi|413917533|gb|AFW57465.1| hypothetical protein ZEAMMB73_932577 [Zea mays]
Length = 677
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/606 (32%), Positives = 323/606 (53%), Gaps = 34/606 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + + G +++AQ+LFD MP R+ +SWTAL++ + + G + F+ P +N +
Sbjct: 43 NALLTSYGRRGRIQDAQQLFDRMPRRDVISWTALLTAYAEGGDFASARLVFDDMPRRNAV 102
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + ++ G A LF K N V++ I A R +V+G +
Sbjct: 103 SWNALLSLYLGAGRPAAAHALFCKTPAK----NAVSYGVIITGLARAGMLREAQAVYGEM 158
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ S N++I L+ GE+D+A VFD M RDV+SW+ ++D + G + EAR
Sbjct: 159 PPRLRDPVGS--NAMILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSEAR 216
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
R+F+ MPERN VSW+ M+ Y + G E LF M R + N S+VL A
Sbjct: 217 RLFEAMPERNVVSWTSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLDGCAQAS 276
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-------- 382
+ G+ VH + ++G D+F+ +LI +YS+ G D R VF + +KD+
Sbjct: 277 LVGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVSWNSLIT 336
Query: 383 ----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
AHV +SW S++ G+ G M E+ ELF+ MP ++D++W+A+
Sbjct: 337 GYVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMPVKDDIAWTAV 396
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
IS ++ + V F +M G PN + FS +L A AS+A L +G H + +G+
Sbjct: 397 ISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQGLQAHAYAVNMGW 456
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+D + +L YAK G + + RVF + + + ++ M+ A+ G A++++ LF
Sbjct: 457 IFDSAVHASLVTMYAKCGRLAEAHRVFSCIRNPSLVAINSMISAFAQHGLAEDALKLFNR 516
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ PN +T L +L AC+ +GLV +G YF SM +Y I+PN HYTC+V++L +G
Sbjct: 517 MQYDGQRPNHVTFLGILTACARAGLVQQGYNYFESMRSVYGIQPNPDHYTCMVNLLGHAG 576
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L EA + INSMP + +AWA+LLS + N +A+ A + L ++ Y +L+N
Sbjct: 577 FLDEALEMINSMPQKDYPDAWAALLSSSSLHSNLDLAKLAAQRLLEIDPYDTTAYRVLTN 636
Query: 663 IYASAG 668
+++SAG
Sbjct: 637 MFSSAG 642
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 228/491 (46%), Gaps = 95/491 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N MI ++ G ++ A R+FD M R+ +SW++++ G K+G V E+ FE P
Sbjct: 164 DPVGSNAMILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSEARRLFEAMP 223
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SWT+ + G+V+ G E L LFL + GV+ N +T S + CA+ + G+
Sbjct: 224 ERNVVSWTSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLDGCAQASLVGEGIQ 283
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V L+ + GF + + SLI + + G + AR VF M+++D+VSW ++ +++
Sbjct: 284 VHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVSWNSLITGYVQNNM 343
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR-------------------- 305
+ +A +F MPER+ +SW+ ++ + G+ E+ LF
Sbjct: 344 IEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMPVKDDIAWTAVISSFIAN 403
Query: 306 -----------QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
QM++ +PNT+ FS +LSALASL L G+ HA+ + +G D +
Sbjct: 404 GNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVH 463
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+ +Y+KCG + VF I +V+ NSMI + +G E+A +LF+ M
Sbjct: 464 ASLVTMYAKCGRLAEAHRVFSCIRNPS---LVAINSMISAFAQHGLAEDALKLFNRM--- 517
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
Q+D G+ PN TF +L A A +++G
Sbjct: 518 ----------------QYD------------GQRPNHVTFLGILTACARAGLVQQG---- 545
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
Y+ F ES R V+ P+ + +T MV L +G+
Sbjct: 546 ---------YNYF---------------ESMRSVYGIQPNPDH--YTCMVNLLGHAGFLD 579
Query: 535 ESINLFEEMEK 545
E++ + M +
Sbjct: 580 EALEMINSMPQ 590
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 161/360 (44%), Gaps = 32/360 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +L +LV +G +H + + G + +L L+IMY ++A + +
Sbjct: 264 TLSVVLDGCAQASLVGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFM 323
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
D+V N +I +Q +E+A LF MPER+ +SWT+++ GF G + ES+ FE
Sbjct: 324 KQKDIVSWNSLITGYVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFE 383
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P ++ I+WTA I F+ NG ++ F ++ + G +PN FS + A A +
Sbjct: 384 QMPVKDDIAWTAVISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQ 443
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
GL G+ +V SL+T+ K G
Sbjct: 444 GLQAHAYAVNMGWIFDSAVHASLVTMYAKCGR---------------------------- 475
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
L EA R+F + + V+ + MI+ + Q G E+A +LF +M +PN F +
Sbjct: 476 ---LAEAHRVFSCIRNPSLVAINSMISAFAQHGLAEDALKLFNRMQYDGQRPNHVTFLGI 532
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L+A A ++ G + + + GI+ + +++L G + + +S+ +KD
Sbjct: 533 LTACARAGLVQQGYNYFESMRSVYGIQPNPDHYTCMVNLLGHAGFLDEALEMINSMPQKD 592
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/592 (34%), Positives = 309/592 (52%), Gaps = 65/592 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF-LKLLESGV 180
TAL++ + K G V ++ F+ +N +SW A + G+ S EA +LF L L + +
Sbjct: 162 TALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPL 221
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ NE +++ A + +G + GL+ K G VSV NSL+T+ K +D
Sbjct: 222 EKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMD---- 277
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
A R+F ERN ++WS MI Y Q+G A
Sbjct: 278 ---------------------------AAMRVFGSSKERNSITWSAMITGYAQNGEANCA 310
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
R+F QM F P F VL+A + + AL G H ++K+G E V++ +AL+D+
Sbjct: 311 ARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDM 370
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG D + F + DV VV W +MI G+ NG+ EEA L+ M K+
Sbjct: 371 YAKCGCIGDAKDGFHQLY--DVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQ------ 422
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
G IP+ T +SVL A A +A+L+ GK LH +I+K
Sbjct: 423 -------------------------GIIPSYLTVTSVLRACACLAALDLGKQLHAQILKC 457
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
F +GTAL+ Y+K G++E S VF RMPD++ ISW ++ ++ G +++++F
Sbjct: 458 RFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMF 517
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EEM+ P+ +T +++L ACSH GLVD+G YF +M YN+ P HY C+VD+LSR
Sbjct: 518 EEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSR 577
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G+L EA+DFI+S+ + + W +L C++ ++ + A + L +L E + Y+LL
Sbjct: 578 AGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILL 637
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SNIYA+ +W D VR LM +G+ K GCSWVE+ N+VH F +P+
Sbjct: 638 SNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGEQQHPE 689
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/613 (32%), Positives = 320/613 (52%), Gaps = 16/613 (2%)
Query: 102 NLEEAQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNP--FQNVISWTAAIC 157
+L A +LFD P R+ + ++++ + G ++ + E P ++ +S+T +
Sbjct: 58 SLASALQLFDETPPPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVT 117
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
F + G + A+ +F +L V PNE T + A A + G + +
Sbjct: 118 SFARAGHAARAVAVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDG 177
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V +L+ + E+ AR++FD M R+ V+W V+L+ +++ + A +F +P
Sbjct: 178 FVIVATNLVHAYAGVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIP 237
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI-VLSALASLKALRSGM 336
ER+EVSW +I Y + +A + + QM + + ++ A A A+ G
Sbjct: 238 ERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQ 297
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H +LK G + F+ L+ Y CG ++ F D +H SWN+++
Sbjct: 298 QLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFR---LSDKSHTASWNALLAALL 354
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
NG + EA+ELFD+MP+R+ VSWS +ISGY++ + D+ +F ML + PN+ T +S
Sbjct: 355 RNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLAS 414
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK- 515
L A A +L++GK +H I+ L + L D YAK G I + + F+R+ DK
Sbjct: 415 ALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFNRVNDKF 474
Query: 516 NEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
+ +S W M+ LA GYA S++LF ++++TSI PN +T + VL AC H+G V KG Y
Sbjct: 475 SSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYY 534
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
F SM Y I+P +HY C+VD+L R+G L EAE ++ MP +PD W S+LS +
Sbjct: 535 FESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILSASRAQG 594
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N + ERA + L KL + H A + LSNIYA AG WI+ VRK + + L + G
Sbjct: 595 NVALGERAAEELAKLDQTHGASKIALSNIYADAGHWINVSVVRKELQDANLERLTG---- 650
Query: 695 EVRNQVHFFFQKT 707
R+ + F F T
Sbjct: 651 --RSGIVFLFSNT 661
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 210/441 (47%), Gaps = 35/441 (7%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ L+GF +V N +++A L A+ LFDGM RN V+W +++G++K ++ +
Sbjct: 173 RALDGFVIVATN-LVHAYAGVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAE 231
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIN 198
F R P ++ +SW I G++ +A+K +++++ E G EV + KACA +
Sbjct: 232 VFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYS 291
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + +I K GF+ H V +L+ G + LA+ F +K SW +L
Sbjct: 292 AVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLA 351
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ G + EAR +FD+MPER+ VSWS MI+ Y Q+G + A +LF M S +PN
Sbjct: 352 ALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVT 411
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ LSA+A L G +H +++ ++ +S+ LID+Y+KCG D F+ +
Sbjct: 412 LASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFNRVN 471
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+K + V WN+MI S I GY H DL
Sbjct: 472 DK-FSSVSPWNAMI--------------------------CSLAIHGY-AHMSLDL---- 499
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYA 497
F+++ + PN TF VL A ++ KGK + + G + + D
Sbjct: 500 FSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLG 559
Query: 498 KSGDIESSRRVFDRMPDKNEI 518
++G +E + ++ MP K ++
Sbjct: 560 RAGYLEEAEQLVSMMPMKPDV 580
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 168/430 (39%), Gaps = 108/430 (25%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
++++ + E N Y + L+K + V +G+ LH ++K G ++ L+
Sbjct: 260 AMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLV 319
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
Y A + + N ++ A ++ G + EA+ LFD MPER+ VSW+
Sbjct: 320 HFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWST 379
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ISG +VQ G S ALKLF +L + ++PN
Sbjct: 380 MISG-------------------------------YVQTGRSDMALKLFYSMLNTSIEPN 408
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
EVT +S A A+ G + I + +T +L G
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDYIMNRPVQ---------LTDNLSSG---------- 449
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-NEVS-WSVMIARYNQSGYPEEAF 301
++D++ + G + +A + F+ + ++ + VS W+ MI GY +
Sbjct: 450 ------------LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSL 497
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF Q+ R S KPN+ F VLSA HA
Sbjct: 498 DLFSQLQRTSIKPNSITFIGVLSAC-----------CHA--------------------- 525
Query: 362 SKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
G G+ F+S+ ++ + H + M+ G G +EEA++L MP + D
Sbjct: 526 ---GTVTKGKYYFESMTREYGIQPTIKH---YGCMVDLLGRAGYLEEAEQLVSMMPMKPD 579
Query: 417 VS-WSAIISG 425
V W +I+S
Sbjct: 580 VVIWGSILSA 589
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 276/468 (58%), Gaps = 20/468 (4%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
E GD+ AR++FD +PE + SW++M Y++ P+ L+ +M + KP+ +
Sbjct: 60 EFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPF 119
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+ AL+ G +H HV+K G++ +VF NALI++YS CG R +FD + D
Sbjct: 120 LFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSD 179
Query: 382 VAHVVSWNSMIGGYGL-----------------NGQMEEAKELFDNMPKRNDVSWSAIIS 424
V V+WN+MI GY GQ++ A++ F MP+R+ VSW+A+I
Sbjct: 180 V---VTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMID 236
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
GYL + +F EM S P++ T SVL A A + +LE G+ + I K
Sbjct: 237 GYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKN 296
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D F+G AL D Y K G++E + +F+ +P +++ +WT MV GLA +G +E++N+F +M
Sbjct: 297 DTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQML 356
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
K S+TP+E+T + VL AC+H+G+VD+G K+F SM + I+PN HY C+VD+L ++G L
Sbjct: 357 KASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHL 416
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
EA + I +MP +P+S W +LL C+ +K+ ++AERA++ + +L + A YVL NIY
Sbjct: 417 KEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIY 476
Query: 665 ASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A+ +W +R++M ++G++K+ GCS +E+ VH F +P+
Sbjct: 477 AACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQ 524
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 194/426 (45%), Gaps = 56/426 (13%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +V SW G+ + + L+L++LE VKP+ T+ + K
Sbjct: 71 FDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVAL 130
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD----------------- 243
+LG + + K G + +V N+LI + G +D+AR +FD
Sbjct: 131 QLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY 190
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
K+DV+SWT I+ F+ G + AR+ F +MPER+ VSW+ MI Y + +EA L
Sbjct: 191 NRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALML 250
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR+M KP+ VL+A A L AL G + ++ K ++ D F+ NALID+Y K
Sbjct: 251 FREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFK 310
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG + +F+++ ++D +W +M+ G +NG EEA
Sbjct: 311 CGNVEMALSIFNTLPQRD---KFTWTAMVVGLAINGCGEEA------------------- 348
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGF 482
+F++ML + P++ T+ VL A +++GK + + G
Sbjct: 349 ------------LNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGI 396
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMV---RGLAESGYAKESIN 538
++ + D K+G ++ + + MP K N I W ++ R ++ A+ +I
Sbjct: 397 EPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIE 456
Query: 539 LFEEME 544
E+E
Sbjct: 457 QILELE 462
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 172/386 (44%), Gaps = 48/386 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L K T + GR LH H++K G+ + L+ MY A I D
Sbjct: 120 LFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSD 179
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V N MI+ R+ +++ +SWTA+++GF+ G+V+ + YF + P
Sbjct: 180 VVTWNAMISG---------YNRI-----KKDVISWTAIVTGFVNTGQVDAARKYFHKMPE 225
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++ +SWTA I G+++ EAL LF ++ S +KP+E T S+ ACA++ LG +
Sbjct: 226 RDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWI 285
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I K + V N+LI + K G V++A S+F+ + +RD
Sbjct: 286 RTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRD----------------- 328
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ +W+ M+ +G EEA +F QM + S P+ + VLSA
Sbjct: 329 --------------KFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSAC 374
Query: 327 ASLKALRSGMHVHAHVL-KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ G A + + GIE ++ ++DL K G K+ + ++ K +
Sbjct: 375 THTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMK--PNS 432
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNM 411
+ W +++G ++ E A+ + +
Sbjct: 433 IVWGALLGACRIHKDAEMAERAIEQI 458
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 328/643 (51%), Gaps = 66/643 (10%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
KSL A VK + + N +N + G L A+ FD E N S+ ++ + K
Sbjct: 28 KSLHA-LYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAK 86
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
++ + F+ NP + +S+ I G+ + A+ LF ++ E G + + T S +
Sbjct: 87 DSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGL 146
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
AC + D L F + GF+ + SV N+ +T K G + A SVF M+
Sbjct: 147 IAACCDRVDLIKQLHCFAV--SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGL-- 202
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
R+EVSW+ MI Y Q +A L+++M
Sbjct: 203 ----------------------------RDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
FK + + VL+AL SL L G H ++K G ++ + + LID YSKCG +DG
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG-GRDG 293
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY-LEH 429
M +++++F + + V W+ +ISGY +
Sbjct: 294 ------------------------------MSDSEKVFQEILSPDLVLWNTMISGYSMNE 323
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-VFL 488
+ + F +M G P+ +F V A ++++S +GK +HG IK P + + +
Sbjct: 324 EHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISV 383
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL Y KSG++ +RRVFDRMP+ N +S+ M++G A+ G+ E++ L++ M + I
Sbjct: 384 NNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGI 443
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
PN +T +++L AC+H G VD+G KYFN+M+ + I+P HY+C++D+L R+G+L EAE
Sbjct: 444 APNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
FI++MP++P S AWA+LL C+ +KN +AERA K L + YV+L+N+YA AG
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAG 563
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+W + +VRK M K +RK GCSW+EV+ + H F + +P
Sbjct: 564 KWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 198/429 (46%), Gaps = 42/429 (9%)
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
K+ AE D G S+ L K+ + N + L K G + AR+ FD E+ +V
Sbjct: 17 KSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVF 75
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
S+ VI+ + + + AR++FDE P+ + VS++ +I+ Y + A LF++M
Sbjct: 76 SYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELG 135
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
F+ + S +++A L +H A + G + ++NA + YSK G ++
Sbjct: 136 FEVDGFTLSGLIAACCDRVDLIKQLHCFA--VSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VF YG++G +E VSW+++I Y +HK+
Sbjct: 194 SVF--------------------YGMDGLRDE-------------VSWNSMIVAYGQHKE 220
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
A++ EM+ G + T +SVL A S+ L G+ HGK+IK GF + +G+
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 492 LTDTYAKSG---DIESSRRVFDRMPDKNEISWTVMVRGLA-ESGYAKESINLFEEMEKTS 547
L D Y+K G + S +VF + + + W M+ G + +++E++ F +M++
Sbjct: 281 LIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIG 340
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-TCVVDMLSRSGRLSE 606
P++ + + V ACS+ +G K + + NI N ++ + +SG L +
Sbjct: 341 HRPDDCSFVCVTSACSNLSSPSQG-KQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLD 399
Query: 607 AEDFINSMP 615
A + MP
Sbjct: 400 ARRVFDRMP 408
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 53/347 (15%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY--LGSRKSLEANE-IV 79
T +L +TS + +I GR HG LIK G H+ ++ + L+ Y G R + +E +
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVF 301
Query: 80 KDLNGFDLVVHNCMINA-NIQWGNLEEAQRLFDGM------------------------P 114
+++ DLV+ N MI+ ++ + EEA + F M P
Sbjct: 302 QEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 115 ER---------------NEVSW-TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ N +S ALIS + K G + ++ F+R P N +S+ I G
Sbjct: 362 SQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKG 421
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI---FKAGF 215
+ Q+G EAL+L+ ++L+SG+ PN +TF +I ACA G F + FK
Sbjct: 422 YAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEP 481
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFD 274
E C +I L + G+++ A D M K V+W +L + ++ A R
Sbjct: 482 EAEHYSC--MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAK 539
Query: 275 EMPERNEVSWS--VMIAR-YNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
E+ ++ + VM+A Y +G EE + + M + C
Sbjct: 540 ELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGC 586
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+F +L S + L GK LH +K +L + Y+K G + +R FD
Sbjct: 10 SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEE 542
+ N S+ V+V+ A+ + LF+E
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDE 99
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/608 (31%), Positives = 333/608 (54%), Gaps = 58/608 (9%)
Query: 101 GNLEEAQRLFD--GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
G L+ A+++FD +P R SW A+++ + + + E++ FE+ P +N +SW I G
Sbjct: 36 GQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISG 95
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
++NG EA ++F + + N V+++S+ + D +F + H
Sbjct: 96 HIKNGMLSEARRVFDTMPDR----NVVSWTSMVRGYVRNGDVAEAERLFWHM------PH 145
Query: 219 VSVCNSLITLS--LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+V + + L L+ G VD AR +FD M ++DVV+ T ++ + E G L EAR +FDEM
Sbjct: 146 KNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEM 205
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
P+RN V+W+ M++ Y ++G + A +LF M
Sbjct: 206 PKRNVVTWTAMVSGYARNGKVDVARKLFEVMP---------------------------- 237
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
E++ A++ Y+ G ++ +FD++ V VV N MI G+G
Sbjct: 238 -----------ERNEVSWTAMLLGYTHSGRMREASSLFDAM---PVKPVVVCNEMIMGFG 283
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLSGEIPNKSTFS 455
LNG++++A+ +F M +R++ +WSA+I Y E K ++L +F M G N +
Sbjct: 284 LNGEVDKARRVFKGMKERDNGTWSAMIKVY-ERKGYELEALGLFRRMQREGLALNFPSLI 342
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
SVL S+ASL+ GK +H ++++ F D+++ + L Y K G++ +++VF+R P K
Sbjct: 343 SVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK 402
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ + W M+ G ++ G +E++N+F +M + + P+++T + VL ACS+SG V +GL+ F
Sbjct: 403 DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELF 462
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
+M+ Y ++P HY C+VD+L R+ +++EA + MP EPD+ W +LL C+T+
Sbjct: 463 ETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMK 522
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+AE AV+ L +L ++ YVLLSN+YA GRW D +R+ + + + K GCSW+E
Sbjct: 523 LDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIE 582
Query: 696 VRNQVHFF 703
V +VH F
Sbjct: 583 VEKKVHMF 590
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 249/539 (46%), Gaps = 86/539 (15%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
++ Y +R+ EA + + + + V N +I+ +I+ G L EA+R+FD MP+RN VSW
Sbjct: 61 MVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSW 120
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+++ G++++G V E+ F P +NV+SWT + G +Q G +A KLF + E V
Sbjct: 121 TSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVV 180
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
C+ +++ R +F +++V ++++ + G+VD+AR +
Sbjct: 181 AVTNMIGGYCEE-GRLDEAR-------ALFDEMPKRNVVTWTAMVSGYARNGKVDVARKL 232
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP------------------------ 277
F+ M +R+ VSWT +L + G + EA +FD MP
Sbjct: 233 FEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKAR 292
Query: 278 -------ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
ER+ +WS MI Y + GY EA LFR+M R N VLS SL
Sbjct: 293 RVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLA 352
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+L G VHA +++ ++D+++++ LI +Y KCG + VF+ KD VV WNS
Sbjct: 353 SLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKD---VVMWNS 409
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
MI GY +G EEA VF++M SG P+
Sbjct: 410 MITGYSQHGLGEEA-------------------------------LNVFHDMCSSGVPPD 438
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGDIESSR 506
TF VL A + +++G +L + Y V G L D ++ + +
Sbjct: 439 DVTFIGVLSACSYSGKVKEGLEL---FETMKCKYQVEPGIEHYACLVDLLGRADQVNEAM 495
Query: 507 RVFDRMP-DKNEISWTVMV---RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ ++MP + + I W ++ R + A+ ++ ++E + P +LS ++A
Sbjct: 496 KLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGP--YVLLSNMYA 552
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 185/401 (46%), Gaps = 67/401 (16%)
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE--MPERNEVSWSVMIAR 290
G L R + ++ + S + + + G L AR++FDE +P R SW+ M+A
Sbjct: 5 GRAILRRCMMLQVRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAA 64
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y ++ P EA LF +M +++
Sbjct: 65 YFEARQPREALLLFEKMP---------------------------------------QRN 85
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
N LI + K G + R VFD++ +++ VVSW SM+ GY NG + EA+ LF +
Sbjct: 86 TVSWNGLISGHIKNGMLSEARRVFDTMPDRN---VVSWTSMVRGYVRNGDVAEAERLFWH 142
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS--TFSSVLCASASVASLE 468
MP +N VSW+ ++ G L+ + D +F+ M P K ++++ L+
Sbjct: 143 MPHKNVVSWTVMLGGLLQEGRVDDARKLFDMM------PEKDVVAVTNMIGGYCEEGRLD 196
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
+ + L ++ K +V TA+ YA++G ++ +R++F+ MP++NE+SWT M+ G
Sbjct: 197 EARALFDEMPK----RNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYT 252
Query: 529 ESGYAKESINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
SG +E+ +LF+ M K + NE+ + +G VDK + F M+ + N
Sbjct: 253 HSGRMREASSLFDAMPVKPVVVCNEM-----IMGFGLNGEVDKARRVFKGMKE----RDN 303
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
G ++ ++ + R G EA M E + + SL+S
Sbjct: 304 GT-WSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLIS 343
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 325/643 (50%), Gaps = 53/643 (8%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F V C ++++ G A L G N AL++ + + + ++ F+
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFIS-NVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLG 203
+V+SW + I + + G AL++F ++ E G +P+ +T ++ CA + LG
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ + +++ V N L+ + K G +D A +VF M +DVVSW ++ + ++
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
G +A R+F++M E + V+WS I+ Y Q G EA + RQM KPN
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIE-------KDVFISNALIDLYSKCGETKDGRL 372
VLS AS+ AL G +H + +K I+ + + N LID+Y+KC
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK------- 421
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM-PKRNDV-SWSAIISGYLEHK 430
+++ A+ +FD++ PK DV +W+ +I GY +H
Sbjct: 422 ---------------------------KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 431 QFDLVFAVFNEMLLSG--EIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVF 487
+ + +EM PN T S L A AS+A+L GK +H ++ +F
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ L D YAK G I +R VFD M KNE++WT ++ G GY +E++ +F+EM +
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ +T+L VL+ACSHSG++D+G++YFN M+ ++ + P HY C+VD+L R+GRL+ A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
I MP EP W + LS C+ + ++ E A + + +LA H Y LLSN+YA+A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVE-VRNQVHFFFQKTDH 709
GRW D +R LM KG++K GCSWVE ++ FF H
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTH 737
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 247/533 (46%), Gaps = 71/533 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQN--VISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
LIS ++ G + ++ R P + V W + I + NG + + L LF +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ TF + KAC EI+ R G S L GF +V V N+L+ + + + AR V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M DVVSW I++ + ++G P+ A
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGK-------------------------------PKVAL 213
Query: 302 RLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+F +MT + +P+ VL ASL G +H + + +++F+ N L+D+
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRND 416
Y+KCG + VF ++ KD VVSWN+M+ GY G+ E+A LF+ M K +
Sbjct: 274 YAKCGMMDEANTVFSNMSVKD---VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
V+WSA ISGY + V +ML SG PN+ T SVL ASV +L GK++H
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 477 IIKLGFPYDV---------FLGTALTDTYAKSGDIESSRRVFDRMPDKNE--ISWTVMVR 525
IK +P D+ + L D YAK ++++R +FD + K ++WTVM+
Sbjct: 391 AIK--YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 526 GLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKG-------LKYFN 576
G ++ G A +++ L EM E PN TI L AC+ + G L+
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ P++ C++DM ++ G +S+A ++M + W SL++G
Sbjct: 509 NAVPLFV-------SNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTG 553
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 231/547 (42%), Gaps = 127/547 (23%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ LH + + + + ++ L+ MY EAN + +++ D+V N M+ Q
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
G E+A RLF+ M E + V+W+A IS
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS----------------------------- 338
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG--LSVFGLIF-- 211
G+ Q G +EAL + ++L SG+KPNEVT S+ CA + G + + + +
Sbjct: 339 --GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 212 ---KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM--EKRDVVSWTVILDVFIEMGDL 266
K G V N LI + K +VD AR++FD + ++RDVV+WTV++ + + GD
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A + EM E + + +PN S L A
Sbjct: 457 NKALELLSEMFEEDCQT-----------------------------RPNAFTISCALVAC 487
Query: 327 ASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
ASL ALR G +HA+ L+ +F+SN LID+Y+KCG D RLVFD+++ K+
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN---E 544
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V+W S++ GYG++G EEA +FD M K + V+ ++ D FN
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M +V + G + + L D ++G
Sbjct: 605 M-------------------KTVFGVSPGPEHYA---------------CLVDLLGRAGR 630
Query: 502 IESSRRVFDRMP-DKNEISWTVM-----VRGLAESG-YAKESINLFEEMEKTSITPNELT 554
+ ++ R+ + MP + + W + G E G YA E I E S T
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKIT-----ELASNHDGSYT 685
Query: 555 ILSVLFA 561
+LS L+A
Sbjct: 686 LLSNLYA 692
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 150/354 (42%), Gaps = 43/354 (12%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+H +L GI + +++ LI Y G + D A V WNS+I YG
Sbjct: 47 IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSD-AGVYHWNSLIRSYGD 104
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
NG + LF M + +SW+ P+ TF V
Sbjct: 105 NGCANKCLYLFGLM---HSLSWT----------------------------PDNYTFPFV 133
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
A ++S+ G+ H + GF +VF+G AL Y++ + +R+VFD M +
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 518 ISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW ++ A+ G K ++ +F M + P+ +T+++VL C+ G G K +
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG-KQLH 252
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
+ N C+VDM ++ G + EA ++M + D +W ++++G Y
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAG---YSQI 308
Query: 637 QIAERAVKNLWKLAEEHPAGYVLLSNI----YASAGRWIDAMNVRKLMTEKGLR 686
E AV+ K+ EE V+ + YA G +A+ V + M G++
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 48/259 (18%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K + A + N L V NC+I+ + G++ +A+ +FD M +NEV+WT+L++G+
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
HG E EAL +F ++ G K + VT +
Sbjct: 557 HGYGE-------------------------------EALGIFDEMRRIGFKLDGVTLLVV 585
Query: 191 CKACAEINDFRLGL-------SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
AC+ G+ +VFG+ G E + L+ L + G ++ A + +
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGV--SPGPEHYA----CLVDLLGRAGRLNAALRLIE 639
Query: 244 RME-KRDVVSWTVILDVFIEMG--DLGE-ARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
M + V W L G +LGE A E+ ++ S++++ Y +G ++
Sbjct: 640 EMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKD 699
Query: 300 AFRLFRQMTRYSFKPNTSC 318
R+ M K C
Sbjct: 700 VTRIRSLMRHKGVKKRPGC 718
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/628 (29%), Positives = 340/628 (54%), Gaps = 35/628 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V +++ ++ G ++ A RLF + E ++++G++K V+ ++ F+ P
Sbjct: 192 DSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP 251
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW + Q+G EAL + + + GV+ + T++S ACA ++ R G
Sbjct: 252 ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQ 311
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ H V +L + D + +++++ + G
Sbjct: 312 L-----------HAQVIRNLPHI--------------------DPYVASALVELYAKSGC 340
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EA+ +F+ + +RN V+W+V+I+ + Q G E+ LF QM + + ++S
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 400
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
S L G +H+ LK G + V +SN+LI +Y+KC + +F + EKD+
Sbjct: 401 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDI--- 457
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW SMI Y G + +A+E FD M ++N ++W+A++ Y++H + ++ ML
Sbjct: 458 VSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE 517
Query: 446 GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ P+ T+ ++ A + + + G + G+ +K+G D + A+ Y+K G I
Sbjct: 518 EYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILE 577
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R+VFD + K+ +SW M+ G ++ G K++I +F+++ K P+ ++ ++VL CSH
Sbjct: 578 ARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSH 637
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +G YF+ M+ +NI P H++C+VD+L R+G L+EA+D I+ MP +P + W
Sbjct: 638 SGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWG 697
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CK + N ++AE A K++++L Y+L++ IYA AG+ D+ +RKLM +KG
Sbjct: 698 ALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKG 757
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K+ G SW+EV N+VH F +P+
Sbjct: 758 IKKNPGYSWMEVDNKVHVFKADDVSHPQ 785
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 282/566 (49%), Gaps = 25/566 (4%)
Query: 89 VHNCMINANIQWGNLEEAQRLF-DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+ N +++A + G L +A+RL + N ++ +++G+ K GR+ +++ F R P +
Sbjct: 61 LQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR 120
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLSV 206
+V SW + G+ Q+ +L+ FL + SG PN T + K+C + L L +
Sbjct: 121 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQL 180
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
++ K + V +L+ + ++ G VDLA +F R+++ + +L +++ +
Sbjct: 181 LAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGV 240
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A +FD MPER+ VSW++M++ +QSG EA + M + +++ ++ L+A
Sbjct: 241 DHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC 300
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L +LR G +HA V++ D ++++AL++LY+K G K+ + VF+S+ +++ V
Sbjct: 301 ARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRN---NV 357
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+W +I G+ G E+ ELF+ M + + + +ISG L + +
Sbjct: 358 AWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLC 417
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L SG+I +S++ A +L+ + I + D+ T++ Y++ G++
Sbjct: 418 LKSGQIQAVVVSNSLISMYAKCDNLQSAE----AIFRFMNEKDIVSWTSMITAYSQVGNV 473
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFA 561
+R FD M +KN I+W M+ + G ++ + +++ M + + P+ +T +++
Sbjct: 474 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 533
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DFINSMPFEP 618
C+ G G + + + + V+ M S+ GR+ EA DF+N
Sbjct: 534 CADLGANKLGDQIIGRTVKV-GLIIDTSVANAVITMYSKCGRILEARKVFDFLNV----K 588
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
D +W ++++G Y + ++A++
Sbjct: 589 DIVSWNAMITG---YSQHGMGKQAIE 611
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 238/492 (48%), Gaps = 51/492 (10%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K L A +++++L D V + ++ + G +EA+ +F+ + +RN V+WT LISGF++
Sbjct: 310 KQLHA-QVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 368
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+G ES ++LF ++ + ++ +++
Sbjct: 369 YGCFTES-------------------------------VELFNQMRAELMTLDQFALATL 397
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
C D LG + L K+G + V V NSLI++ K + A ++F M ++D+
Sbjct: 398 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDI 457
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
VSWT ++ + ++G++ +AR FD M E+N ++W+ M+ Y Q G E+ R+++ M
Sbjct: 458 VSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE 517
Query: 311 SF-KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+ +P+ + + A L A + G + +K+G+ D ++NA+I +YSKCG +
Sbjct: 518 EYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILE 577
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
R VFD + KD +VSWN+MI GY +G ++A E+FD++ KR + +S+ A++SG
Sbjct: 578 ARKVFDFLNVKD---IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 634
Query: 426 YLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
F+ M + I P FS ++ L + KDL I +
Sbjct: 635 CSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDL---IDDMPMKP 691
Query: 485 DVFLGTALTDTYAKSGDIE----SSRRVFD-RMPDKNEISWTVMVRGLAESGYAKESINL 539
+ AL G+ E +++ VF+ PD S+ +M + A++G + +S +
Sbjct: 692 TAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSG--SYMLMAKIYADAGKSDDSAQI 749
Query: 540 FEEMEKTSITPN 551
+ M I N
Sbjct: 750 RKLMRDKGIKKN 761
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 44/331 (13%)
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH--VVSWNSMIGGYG 396
H ++ +G+ VF+ N L+ Y CG D R ++ D+AH V++ N M+ GY
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDAR----RLLLMDIAHPNVITHNVMLNGYA 102
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFS 455
G++ +A ELF MP R+ SW+ ++SGY + +Q+ + F M SG+ PN T +
Sbjct: 103 KLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLA 162
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR-------- 507
+ + ++ L + K D + AL D + + G ++ + R
Sbjct: 163 CAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEP 222
Query: 508 -----------------------VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
+FD MP+++ +SW +MV L++SG +E++++ +M+
Sbjct: 223 TMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQ 282
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY--TCVVDMLSRSG 602
+ + T S L AC+ + G + + I N+ P+ Y + +V++ ++SG
Sbjct: 283 SKGVRLDSTTYTSSLTACARLSSLRWGKQLH--AQVIRNL-PHIDPYVASALVELYAKSG 339
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
EA+ NS+ + ++ AW L+SG Y
Sbjct: 340 CFKEAKGVFNSL-HDRNNVAWTVLISGFLQY 369
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 166/378 (43%), Gaps = 74/378 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH +K+G + ++ L+ MY A I + +N D+V MI A Q
Sbjct: 410 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQ 469
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+ +A+ FDGM E+N ++W A++ +++HG E+ + ++
Sbjct: 470 VGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYK----------------- 512
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ L E V+P+ VT+ ++ K CA++ +LG + G K G
Sbjct: 513 -------------VMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDT 559
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
SV N++IT+ K G + AR VFD + +D+VSW ++ + + G +A IFD++ +R
Sbjct: 560 SVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKR 619
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+ +S+ +++ + SG +E F M R
Sbjct: 620 GAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR-------------------------- 653
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
AH + G+E + ++DL + G + + + D + K A V W +++
Sbjct: 654 ----AHNISPGLEH----FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEV--WGALLSAC 703
Query: 396 GLNGQME----EAKELFD 409
++G E AK +F+
Sbjct: 704 KIHGNNELAELAAKHVFE 721
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/629 (32%), Positives = 324/629 (51%), Gaps = 66/629 (10%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF VV+ C + +++ G A + G +++ + AL+ + K G + + F +
Sbjct: 204 GFSCVVNACTGSRDLEAGRKVHAMVIRTGY-DKDVFTANALVDMYSKLGDIRMAAVVFGK 262
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +V+SW A I G V +G AL+L L++ SG+ PN T SSI KACA F LG
Sbjct: 263 VPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLG 322
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + KA + ++ I L +D++ +
Sbjct: 323 RQIHGFMVKANADS-----DNYIAFGL--------------------------VDMYAKH 351
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G L +A+++FD +P+R+ V W+ +I+ + EA LF +M + F N + + VL
Sbjct: 352 GLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVL 411
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ ASL+A+ VHA K+G D + N LID Y KC VF+ D+
Sbjct: 412 KSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDI- 470
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+++ SMI E+A +LF EML
Sbjct: 471 --IAFTSMITALSQCDHGEDAIKLF-------------------------------MEML 497
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G P+ SS+L A AS+++ E+GK +H +IK F DVF G AL TYAK G IE
Sbjct: 498 RKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIE 557
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ F +P+K +SW+ M+ GLA+ G+ K ++++F M I+PN +T+ SVL AC+
Sbjct: 558 DADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACN 617
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLVD+ +YFNSM+ ++ I+ HY C++D+L R+G+L +A + +NSMPF+ ++ W
Sbjct: 618 HAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVW 677
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL+ + +++ ++ A + L+ L E +VLL+N YASAG W D VRKLM +
Sbjct: 678 GALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDS 737
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K SWVE++++VH F +P+
Sbjct: 738 KVKKEPAMSWVELKDKVHTFIVGDKSHPR 766
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 40/365 (10%)
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
G ARR+FDE+P+ VSWS ++ Y+ + P +A FR M S + N +VL
Sbjct: 54 GSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCA 113
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDVAHV 385
G +HA + G+ D+F++NAL+ +Y G + R+VFD E++
Sbjct: 114 PDAG---FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERN---T 167
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN ++ Y N + A + VF EM+
Sbjct: 168 VSWNGLMSAYVKNDRCSHAVK-------------------------------VFGEMVWG 196
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN+ FS V+ A LE G+ +H +I+ G+ DVF AL D Y+K GDI +
Sbjct: 197 GVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMA 256
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF ++P+ + +SW + G G+ + ++ L +M+ + + PN T+ S+L AC+ S
Sbjct: 257 AVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGS 316
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G + G + M N + +VDM ++ G L +A+ + +P + D W +
Sbjct: 317 GAFNLGRQIHGFMVKA-NADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNA 374
Query: 626 LLSGC 630
L+SGC
Sbjct: 375 LISGC 379
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 69/420 (16%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +SW++ + + N +AL F + V+ NE + K CA D
Sbjct: 60 FDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAP--DA 116
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDV 259
G + L G + V N+L+ + G VD AR VFD +R+ VSW ++
Sbjct: 117 GFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+++ A ++F EM W +PN F
Sbjct: 177 YVKNDRCSHAVKVFGEM------VWG-------------------------GVQPNEFGF 205
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
S V++A + L +G VHA V++ G +KDVF +NAL+D+YSK G+ + +VF + E
Sbjct: 206 SCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPE 265
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
D VVSWN+ I G L+G + A EL M
Sbjct: 266 TD---VVSWNAFISGCVLHGHDQHALELLLQMKS-------------------------- 296
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
SG +PN T SS+L A A + G+ +HG ++K D ++ L D YAK
Sbjct: 297 -----SGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKH 351
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G ++ +++VFD +P ++ + W ++ G + E+++LF M K N T+ +VL
Sbjct: 352 GLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVL 411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 191/500 (38%), Gaps = 129/500 (25%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK GR +HG ++K + Y+ L+ MY
Sbjct: 309 ILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMY-------------------- 348
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G L++A+++FD +P+R+ V W ALISG HG
Sbjct: 349 -----------AKHGLLDDAKKVFDWIPQRDLVLWNALISG-CSHG-------------- 382
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
Q+ EAL LF ++ + G N T +++ K+ A + V
Sbjct: 383 -------------AQHA---EALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQV 426
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
L K GF V N LI K ++ A VF++ D++++T
Sbjct: 427 HALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFT------------ 474
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
MI +Q + E+A +LF +M R P+ S +L+A
Sbjct: 475 -------------------SMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNAC 515
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
ASL A G VHAH++K DVF NAL+ Y+KCG +D L F + EK VV
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKG---VV 572
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SW++MIGG +G + A ++F M EH
Sbjct: 573 SWSAMIGGLAQHGHGKRALDVFHRMVD--------------EHIS--------------- 603
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESS 505
PN T +SVLCA +++ K + ++ G + D ++G ++ +
Sbjct: 604 --PNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDA 661
Query: 506 RRVFDRMP-DKNEISWTVMV 524
+ + MP N W ++
Sbjct: 662 MELVNSMPFQTNAAVWGALL 681
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 135/319 (42%), Gaps = 42/319 (13%)
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+L+ A+ ++L G H+HAH+LK G+ N L+ YSKC R VFD I D
Sbjct: 10 LLTRYAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEI--PD 65
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
H VSW+S++ Y N +A F +M + NE
Sbjct: 66 PCH-VSWSSLVTAYSNNAMPRDALGAFRSMRSCS---------------------VRCNE 103
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+L V+ A A G LH + G D+F+ AL Y G
Sbjct: 104 FVL-----------PVVLKCAPDAGF--GTQLHALAMATGLGGDIFVANALVAMYGGFGF 150
Query: 502 IESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
++ +R VFD ++N +SW ++ ++ ++ +F EM + PNE V+
Sbjct: 151 VDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVN 210
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
AC+ S ++ G K ++M + +VDM S+ G + A +P E D
Sbjct: 211 ACTGSRDLEAGRK-VHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP-ETDV 268
Query: 621 NAWASLLSGCKTYKNEQIA 639
+W + +SGC + ++Q A
Sbjct: 269 VSWNAFISGCVLHGHDQHA 287
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 20/235 (8%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T +L A+ SL +G +H ++K G + VF L+ Y+K S+RRVFD +
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGL-FAVFRNHLLS-FYSKCRLPGSARRVFDEI 63
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
PD +SW+ +V + + ++++ F M S+ NE +L V+ C+ D G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEF-VLPVVLKCA----PDAGF 118
Query: 573 -KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
+++ + + +V M G + EA + E ++ +W L+S
Sbjct: 119 GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMS--- 175
Query: 632 TYKNEQIAERAVK----NLWKLAEEHPAGYVLLSNIYAS-----AGRWIDAMNVR 677
Y AVK +W + + G+ + N AGR + AM +R
Sbjct: 176 AYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIR 230
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/620 (32%), Positives = 301/620 (48%), Gaps = 67/620 (10%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
++ ++QW + Q PE V T LI + G E+ F P ++V++W
Sbjct: 18 IVRNSLQWISNSTLQSNPPFTPEGPSVWATNLIKSYFDKGLTREACNLFNEIPERDVVTW 77
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
TA I GF +A +F ++L S V+PN T SS+ KAC + G L K
Sbjct: 78 TAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATK 137
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI-EMGDLGEARR 271
G ++ V V N+L LD++ + +A
Sbjct: 138 HGIDRSVYVQNAL-------------------------------LDMYAASCATMDDALS 166
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+F+++P + VSW+ +IA + G FRQM PN+ FSI A AS+ +
Sbjct: 167 VFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISS 226
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
G +HA V K G+ D + N+++D+Y +C D
Sbjct: 227 YSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCD---------------------- 264
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
AK F + ++N ++W+ +I+GY E ++F +M G PN
Sbjct: 265 ------------AKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNC 311
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF+S+ A A++A L G+ +HG I++ GF +V L +L D YAK G I S ++F
Sbjct: 312 FTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCD 371
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
MP ++ +SWT M+ G GY KE++ LF+EM ++ I P+ + + VL CSH+GLVDKG
Sbjct: 372 MPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKG 431
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
LKYF SM YNI P+ Y CVVD+L R+GR+ EA + +MPFEPD + W +LL CK
Sbjct: 432 LKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACK 491
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
YK + A + + Y+LLS IYA+ G+W + +RKLM +K G
Sbjct: 492 AYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGK 551
Query: 692 SWVEVRNQVHFFFQKTDHNP 711
SW+E+RN+V+ F P
Sbjct: 552 SWIEIRNEVYSFVVGAKMGP 571
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GFD + + N +I+ + G++ ++ +LF MP R+ VSWT ++ G+ H
Sbjct: 341 GFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAH---------- 390
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
G+ EA+KLF ++++SG++P+ + F + C+
Sbjct: 391 ---------------------GYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVD 429
Query: 202 LGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDV 259
GL F ++ + ++ L + G V+ A + + M + D W +L
Sbjct: 430 KGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGA 489
Query: 260 F--IEMGDLGE--ARRIFDEMP 277
++ +LG A+R+ D P
Sbjct: 490 CKAYKLSNLGNLAAQRVLDRRP 511
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/620 (32%), Positives = 301/620 (48%), Gaps = 67/620 (10%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
++ ++QW + Q PE V T LI + G E+ F P ++V++W
Sbjct: 18 IVRNSLQWISNSTLQSNPPFTPEGPSVWATNLIKSYFDKGLTREACNLFNEIPERDVVTW 77
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
TA I GF +A +F ++L S V+PN T SS+ KAC + G L K
Sbjct: 78 TAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATK 137
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI-EMGDLGEARR 271
G ++ V V N+L LD++ + +A
Sbjct: 138 HGIDRSVYVQNAL-------------------------------LDMYAASCATMDDALS 166
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+F+++P + VSW+ +IA + G FRQM PN+ FSI A AS+ +
Sbjct: 167 VFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISS 226
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
G +HA V K G+ D + N+++D+Y +C D
Sbjct: 227 YSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCD---------------------- 264
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
AK F + ++N ++W+ +I+GY E ++F +M G PN
Sbjct: 265 ------------AKRCFGELTEKNLITWNTLIAGY-ERSDSSESLSLFFQMGSEGYKPNC 311
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF+S+ A A++A L G+ +HG I++ GF +V L +L D YAK G I S ++F
Sbjct: 312 FTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCD 371
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
MP ++ +SWT M+ G GY KE++ LF+EM ++ I P+ + + VL CSH+GLVDKG
Sbjct: 372 MPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKG 431
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
LKYF SM YNI P+ Y CVVD+L R+GR+ EA + +MPFEPD + W +LL CK
Sbjct: 432 LKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACK 491
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
YK + A + + Y+LLS IYA+ G+W + +RKLM +K G
Sbjct: 492 AYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGK 551
Query: 692 SWVEVRNQVHFFFQKTDHNP 711
SW+E+RN+V+ F P
Sbjct: 552 SWIEIRNEVYSFVVGAKMGP 571
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GFD + + N +I+ + G++ ++ +LF MP R+ VSWT ++ G+ H
Sbjct: 341 GFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAH---------- 390
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
G+ EA+KLF ++++SG++P+ + F + C+
Sbjct: 391 ---------------------GYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVD 429
Query: 202 LGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDV 259
GL F ++ + ++ L + G V+ A + + M + D W +L
Sbjct: 430 KGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGA 489
Query: 260 F--IEMGDLGE--ARRIFDEMP 277
++ +LG A+R+ D P
Sbjct: 490 CKAYKLSNLGNLAAQRVLDRRP 511
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/628 (29%), Positives = 340/628 (54%), Gaps = 35/628 (5%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V +++ ++ G ++ A RLF + E ++++G++K V+ ++ F+ P
Sbjct: 172 DSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP 231
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW + Q+G EAL + + + GV+ + T++S ACA ++ R G
Sbjct: 232 ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQ 291
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ H V +L + D + +++++ + G
Sbjct: 292 L-----------HAQVIRNLPHI--------------------DPYVASALVELYAKSGC 320
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
EA+ +F+ + +RN V+W+V+I+ + Q G E+ LF QM + + ++S
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
S L G +H+ LK G + V +SN+LI +Y+KC + +F + EKD+
Sbjct: 381 CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDI--- 437
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW SMI Y G + +A+E FD M ++N ++W+A++ Y++H + ++ ML
Sbjct: 438 VSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE 497
Query: 446 GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ P+ T+ ++ A + + + G + G+ +K+G D + A+ Y+K G I
Sbjct: 498 EYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILE 557
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R+VFD + K+ +SW M+ G ++ G K++I +F+++ K P+ ++ ++VL CSH
Sbjct: 558 ARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSH 617
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +G YF+ M+ +NI P H++C+VD+L R+G L+EA+D I+ MP +P + W
Sbjct: 618 SGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWG 677
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CK + N ++AE A K++++L Y+L++ IYA AG+ D+ +RKLM +KG
Sbjct: 678 ALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKG 737
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K+ G SW+EV N+VH F +P+
Sbjct: 738 IKKNPGYSWMEVDNKVHVFKADDVSHPQ 765
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 282/566 (49%), Gaps = 25/566 (4%)
Query: 89 VHNCMINANIQWGNLEEAQRLF-DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+ N +++A + G L +A+RL + N ++ +++G+ K GR+ +++ F R P +
Sbjct: 41 LQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR 100
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLSV 206
+V SW + G+ Q+ +L+ FL + SG PN T + K+C + L L +
Sbjct: 101 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQL 160
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
++ K + V +L+ + ++ G VDLA +F R+++ + +L +++ +
Sbjct: 161 LAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGV 220
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A +FD MPER+ VSW++M++ +QSG EA + M + +++ ++ L+A
Sbjct: 221 DHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC 280
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L +LR G +HA V++ D ++++AL++LY+K G K+ + VF+S+ +++ V
Sbjct: 281 ARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRN---NV 337
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+W +I G+ G E+ ELF+ M + + + +ISG L + +
Sbjct: 338 AWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLC 397
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L SG+I +S++ A +L+ + I + D+ T++ Y++ G++
Sbjct: 398 LKSGQIQAVVVSNSLISMYAKCDNLQSAE----AIFRFMNEKDIVSWTSMITAYSQVGNV 453
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFA 561
+R FD M +KN I+W M+ + G ++ + +++ M + + P+ +T +++
Sbjct: 454 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 513
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DFINSMPFEP 618
C+ G G + + + + V+ M S+ GR+ EA DF+N
Sbjct: 514 CADLGANKLGDQIIGRTVKV-GLIIDTSVANAVITMYSKCGRILEARKVFDFLNV----K 568
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
D +W ++++G Y + ++A++
Sbjct: 569 DIVSWNAMITG---YSQHGMGKQAIE 591
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 238/492 (48%), Gaps = 51/492 (10%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K L A +++++L D V + ++ + G +EA+ +F+ + +RN V+WT LISGF++
Sbjct: 290 KQLHA-QVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 348
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+G ES ++LF ++ + ++ +++
Sbjct: 349 YGCFTES-------------------------------VELFNQMRAELMTLDQFALATL 377
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
C D LG + L K+G + V V NSLI++ K + A ++F M ++D+
Sbjct: 378 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDI 437
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
VSWT ++ + ++G++ +AR FD M E+N ++W+ M+ Y Q G E+ R+++ M
Sbjct: 438 VSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE 497
Query: 311 SF-KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+ +P+ + + A L A + G + +K+G+ D ++NA+I +YSKCG +
Sbjct: 498 EYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILE 557
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
R VFD + KD +VSWN+MI GY +G ++A E+FD++ KR + +S+ A++SG
Sbjct: 558 ARKVFDFLNVKD---IVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 614
Query: 426 YLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
F+ M + I P FS ++ L + KDL I +
Sbjct: 615 CSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDL---IDDMPMKP 671
Query: 485 DVFLGTALTDTYAKSGDIE----SSRRVFD-RMPDKNEISWTVMVRGLAESGYAKESINL 539
+ AL G+ E +++ VF+ PD S+ +M + A++G + +S +
Sbjct: 672 TAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSG--SYMLMAKIYADAGKSDDSAQI 729
Query: 540 FEEMEKTSITPN 551
+ M I N
Sbjct: 730 RKLMRDKGIKKN 741
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 166/378 (43%), Gaps = 74/378 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH +K+G + ++ L+ MY A I + +N D+V MI A Q
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQ 449
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+ +A+ FDGM E+N ++W A++ +++HG E+ + ++
Sbjct: 450 VGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYK----------------- 492
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ L E V+P+ VT+ ++ K CA++ +LG + G K G
Sbjct: 493 -------------VMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDT 539
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
SV N++IT+ K G + AR VFD + +D+VSW ++ + + G +A IFD++ +R
Sbjct: 540 SVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKR 599
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+ +S+ +++ + SG +E F M R
Sbjct: 600 GAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR-------------------------- 633
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
AH + G+E + ++DL + G + + + D + K A V W +++
Sbjct: 634 ----AHNISPGLEH----FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEV--WGALLSAC 683
Query: 396 GLNGQME----EAKELFD 409
++G E AK +F+
Sbjct: 684 KIHGNNELAELAAKHVFE 701
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 44/331 (13%)
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH--VVSWNSMIGGYG 396
H ++ +G+ VF+ N L+ Y CG D R ++ D+AH V++ N M+ GY
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDAR----RLLLMDIAHPNVITHNVMLNGYA 82
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFS 455
G++ +A ELF MP R+ SW+ ++SGY + +Q+ + F M SG+ PN T +
Sbjct: 83 KLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLA 142
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR-------- 507
+ + ++ L + K D + AL D + + G ++ + R
Sbjct: 143 CAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEP 202
Query: 508 -----------------------VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
+FD MP+++ +SW +MV L++SG +E++++ +M+
Sbjct: 203 TMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQ 262
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY--TCVVDMLSRSG 602
+ + T S L AC+ + G + + I N+ P+ Y + +V++ ++SG
Sbjct: 263 SKGVRLDSTTYTSSLTACARLSSLRWGKQLH--AQVIRNL-PHIDPYVASALVELYAKSG 319
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
EA+ NS+ + ++ AW L+SG Y
Sbjct: 320 CFKEAKGVFNSL-HDRNNVAWTVLISGFLQY 349
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 331/627 (52%), Gaps = 72/627 (11%)
Query: 91 NCMINANIQWGNLEEAQRLFD-----GMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+C++ G + E +R+ G N V +LI+ + K G V+ + F+
Sbjct: 557 SCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVV-NSLIATYFKSGEVDSAHKLFDELG 615
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW + I G V NGFS AL+ F+++L V + T + ACA + LG +
Sbjct: 616 DRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRA 675
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G KA F + V N+L LD++ + G+
Sbjct: 676 LHGQGVKACFSREVMFNNTL-------------------------------LDMYSKCGN 704
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L +A + F++M ++ VSW+ +IA Y + G ++A RLF +M P+ + VL A
Sbjct: 705 LNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHA 764
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A +L G VH ++ K + + +SNAL+D+Y+KCG
Sbjct: 765 CACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCG-------------------- 804
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
MEEA +F +P ++ VSW+ +I GY ++ + +F EM
Sbjct: 805 --------------SMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKE 850
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P+ T + +L A S+A+LE G+ +HG I++ G+ ++ + AL D Y K G + +
Sbjct: 851 SR-PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHA 909
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R +FD +P+K+ I+WTVM+ G G E+I F++M I P+E+T S+L+ACSHS
Sbjct: 910 RLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHS 969
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GL+++G +FNSM N++P HY C+VD+L+R+G LS+A + I +MP +PD+ W +
Sbjct: 970 GLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGA 1029
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL GC+ + + ++AE+ +++++L ++ YVLL+NIYA A +W + +R+ + ++GL
Sbjct: 1030 LLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGL 1089
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+KS GCSW+EV+ + F +P+
Sbjct: 1090 KKSPGCSWIEVQGKFTTFVSADTAHPQ 1116
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/550 (24%), Positives = 232/550 (42%), Gaps = 109/550 (19%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T C+LK + V + + +HG + K G + L+ Y S + A++
Sbjct: 552 NSY--TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHK 609
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF----------DGMPERNEVSWTA---- 123
+ +L D+V N MI+ + G A F D N V+ A
Sbjct: 610 LFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGS 669
Query: 124 -------------------------LISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
L+ + K G + +++ FE+ + V+SWT+ I
Sbjct: 670 LSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAA 729
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+V+ G +A++LF ++ GV P+ + +S+ ACA N G V I K
Sbjct: 730 YVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALC 789
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ V N+L+ + K G ++ A VF ++ +D+VSW
Sbjct: 790 LPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSW------------------------- 824
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+ MI Y+++ P EA +LF +M + S +P+ + +L A SL AL G +
Sbjct: 825 ------NTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGI 877
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H +L+ G ++ ++NALID+Y KCG RL+FD I EKD +++W MI G G++
Sbjct: 878 HGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKD---LITWTVMISGCGMH 934
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G EA A F +M ++G P++ TF+S+L
Sbjct: 935 GLGNEA-------------------------------IATFQKMRIAGIKPDEITFTSIL 963
Query: 459 CASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
A + L +G +I + + + D A++G++ + + + MP K +
Sbjct: 964 YACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPD 1023
Query: 518 IS-WTVMVRG 526
+ W ++ G
Sbjct: 1024 ATIWGALLCG 1033
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 227/494 (45%), Gaps = 63/494 (12%)
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+ ICK C E+ D R + + + K+ E ++ +S++ L + + + V +
Sbjct: 423 TKICKFC-EVGDLRNAVELLRMSQKS--ELDLNAYSSILQLCAEHKCLQEGKMVHSVISS 479
Query: 248 RDV----VSWTVILDVFIEMGDLGEARRIFDEMPERNEV-SWSVMIARYNQSGYPEEAFR 302
+ V ++ +++ G L E RRIFD + N+V W++M++ Y + G E+
Sbjct: 480 NGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF++M + N+ FS +L A+L + +H V K+G
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGS------------- 586
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
++++V NS+I Y +G+++ A +LFD + R+ VSW+++
Sbjct: 587 -----------YNTVV----------NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSM 625
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
ISG + + F +ML+ + +T + + A A+V SL G+ LHG+ +K F
Sbjct: 626 ISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACF 685
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+V L D Y+K G++ + + F++M K +SWT ++ G ++I LF E
Sbjct: 686 SREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYE 745
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME--------PIYNIKPNGRHYTCV 594
ME ++P+ ++ SVL AC+ +DKG N + P+ N +
Sbjct: 746 MESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNA---------L 796
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
+DM ++ G + EA + +P + D +W +++ G Y + A+K ++ +E
Sbjct: 797 MDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGG---YSKNSLPNEALKLFAEMQKESR 852
Query: 655 AGYVLLSNIYASAG 668
+ ++ + + G
Sbjct: 853 PDGITMACLLPACG 866
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 184/438 (42%), Gaps = 72/438 (16%)
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
N I K+ L V N +++ + G++EEA +F +P ++ VSW +I G+ K
Sbjct: 779 NYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSK----- 833
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
N EALKLF ++ + +P+ +T + + AC
Sbjct: 834 --------------------------NSLPNEALKLFAEMQKES-RPDGITMACLLPACG 866
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ +G + G I + G+ + V N+LI + +K G + AR +FD + ++D+++WTV
Sbjct: 867 SLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTV 926
Query: 256 ILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRY 310
++ G EA F +M + +E++++ ++ + SG E + F M +
Sbjct: 927 MISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISEC 986
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+ +P ++ ++ LA L ++ + + I+ D I AL+ CG
Sbjct: 987 NMEPKLEHYACMVDLLARTGNLSKAYNL---IETMPIKPDATIWGALL-----CG----C 1034
Query: 371 RLVFD-SIVEKDVAHVVSWNSMIGGYGL--------NGQMEEAKELFDNMPKRN-----D 416
R+ D + EK HV GY + + EE K+L + + KR
Sbjct: 1035 RIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPG 1094
Query: 417 VSW-------SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
SW + +S H Q +F++ N + + ++ N+ + A + +EK
Sbjct: 1095 CSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRI--KMKNEGHSPKMRYALINAGDMEK 1152
Query: 470 GKDLHGKIIKLGFPYDVF 487
L G KL + +
Sbjct: 1153 EVALCGHSEKLAMAFGIL 1170
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 49/309 (15%)
Query: 28 LKDITSQNLVIQG---RALHGHLIK--TGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
+KDI S N +I G +L +K + KE + L + SL A EI + +
Sbjct: 818 VKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGI 877
Query: 83 NGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+G +L V N +I+ ++ G+L A+ LFD +PE++ ++WT +ISG
Sbjct: 878 HGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISG------- 930
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
CG +G EA+ F K+ +G+KP+E+TF+SI AC
Sbjct: 931 ----------------------CGM--HGLGNEAIATFQKMRIAGIKPDEITFTSILYAC 966
Query: 195 AEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVS 252
+ G F +I + E + ++ L + G + A ++ + M K D
Sbjct: 967 SHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATI 1026
Query: 253 WTVILDVFIEMGDLGEARRIFDEM--PERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTR 309
W +L D+ A ++ + + E + + V++A Y ++ EE +L ++ +
Sbjct: 1027 WGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGK 1086
Query: 310 YSFKPNTSC 318
K + C
Sbjct: 1087 RGLKKSPGC 1095
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 319/628 (50%), Gaps = 66/628 (10%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF VV+ C + NI G A + G E++ + AL+ ++K GRV+ + FE+
Sbjct: 204 GFSCVVNACTGSRNIDAGRQVHAMVVRMGY-EKDVFTANALVDMYVKMGRVDIASVIFEK 262
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +V+SW A I G V NG A++L L++ SG+ PN SSI KACA F LG
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 322
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + KA + + I + L +D++ +
Sbjct: 323 RQIHGFMIKANADS-----DDYIGVGL--------------------------VDMYAKN 351
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
L +A ++FD M R+ + W+ +I+ + G +EAF +F + + N + + VL
Sbjct: 352 HFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 411
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ ASL+A + VHA KIG D + N LID Y KC D VF+ D+
Sbjct: 412 KSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI- 470
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
++ SMI E A +LF EML
Sbjct: 471 --IAVTSMITALSQCDHGEGAIKLF-------------------------------MEML 497
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G P+ SS+L A AS+++ E+GK +H +IK F D F G AL TYAK G IE
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ F +P++ +SW+ M+ GLA+ G+ K ++ LF M I PN +T+ SVL AC+
Sbjct: 558 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN 617
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLVD+ +YFNSM+ ++ I HY+C++D+L R+G+L +A + +NSMPF+ +++ W
Sbjct: 618 HAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVW 677
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL + +K+ ++ + A + L+ L E +VLL+N YAS+G W + VRKLM +
Sbjct: 678 GALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDS 737
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++K SWVEV+++VH F +P
Sbjct: 738 NIKKEPAMSWVEVKDKVHTFIVGDKSHP 765
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 199/437 (45%), Gaps = 69/437 (15%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LIS + K R + F+ P +SW++ + + NG A++ F + GV N
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E + K + D +LG V + GF V V N+L+ + G +D AR VFD
Sbjct: 103 EFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFD 159
Query: 244 RM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+R+ VSW ++ +++ G+A ++F EM WS
Sbjct: 160 EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM------VWS----------------- 196
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+P FS V++A + + +G VHA V+++G EKDVF +NAL+D+Y
Sbjct: 197 --------GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYV 248
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
K G ++F+ + + D VVSWN++I G LNG
Sbjct: 249 KMGRVDIASVIFEKMPDSD---VVSWNALISGCVLNGH---------------------- 283
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+H+ +L+ +M SG +PN SS+L A A + + G+ +HG +IK
Sbjct: 284 -----DHRAIELLL----QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 334
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D ++G L D YAK+ ++ + +VFD M ++ I W ++ G + G E+ ++F
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYG 394
Query: 543 MEKTSITPNELTILSVL 559
+ K + N T+ +VL
Sbjct: 395 LRKEGLGVNRTTLAAVL 411
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 47/349 (13%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L+ A+ +AL G H+HA++LK G + N LI YSKC R VFD I D
Sbjct: 11 LTRYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEI--PDP 66
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
H VSW+S++ Y NG +P+ SAI F+ M
Sbjct: 67 CH-VSWSSLVTAYSNNG-----------LPR------SAI--------------QAFHGM 94
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G N+ VL V + G +H + GF DVF+ AL Y G +
Sbjct: 95 RAEGVCCNEFALPVVL---KCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFM 151
Query: 503 ESSRRVFDRM-PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ +RRVFD ++N +SW ++ ++ ++I +F EM + I P E V+ A
Sbjct: 152 DDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNA 211
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+ S +D G + ++M + + +VDM + GR+ A MP + D
Sbjct: 212 CTGSRNIDAG-RQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVV 269
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEH--PAGYVLLSNIYASAG 668
+W +L+SGC ++ RA++ L ++ P ++L S + A AG
Sbjct: 270 SWNALISGCVLNGHDH---RAIELLLQMKSSGLVPNVFMLSSILKACAG 315
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 115/321 (35%), Gaps = 80/321 (24%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +LK S R +H K G + ++ L+ Y +A + ++
Sbjct: 406 TLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC 465
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER-------------------------- 116
+ D++ MI A Q + E A +LF M +
Sbjct: 466 SSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 525
Query: 117 -------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ + AL+ + K G +E++ F P + V+SW+A I G Q+G
Sbjct: 526 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 585
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
AL+LF ++++ G+ PN +T +S+ AC
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCACNH--------------------------- 618
Query: 224 SLITLSLKMGEVDLARSVFDRMEK-----RDVVSWTVILDVFIEMGDLGEARRIFDEMP- 277
G VD A+ F+ M++ R ++ ++D+ G L +A + + MP
Sbjct: 619 --------AGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 670
Query: 278 ERNEVSWSVMIARYNQSGYPE 298
+ N W ++ PE
Sbjct: 671 QANASVWGALLGASRVHKDPE 691
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 16/233 (6%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T S L A+ +L G LH ++K GF L L Y+K +RRVFD +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEI 63
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
PD +SW+ +V + +G + +I F M + NE + VL + L +
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQ-- 121
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
++M + +V M G + +A + E ++ +W L+S
Sbjct: 122 --VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA--Y 177
Query: 633 YKNEQIAERAV---KNLWKLAEEHPAGYVLLSNIYAS-----AGRWIDAMNVR 677
KN+Q + + +W + G+ + N AGR + AM VR
Sbjct: 178 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVR 230
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 319/628 (50%), Gaps = 66/628 (10%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF VV+ C + NI G A + G E++ + AL+ ++K GRV+ + FE+
Sbjct: 111 GFSCVVNACTGSRNIDAGRQVHAMVVRMGY-EKDVFTANALVDMYVKMGRVDIASVIFEK 169
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +V+SW A I G V NG A++L L++ SG+ PN SSI KACA F LG
Sbjct: 170 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 229
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + KA + + I + L +D++ +
Sbjct: 230 RQIHGFMIKANADS-----DDYIGVGL--------------------------VDMYAKN 258
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
L +A ++FD M R+ + W+ +I+ + G +EAF +F + + N + + VL
Sbjct: 259 HFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 318
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ ASL+A + VHA KIG D + N LID Y KC D VF+ D+
Sbjct: 319 KSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI- 377
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
++ SMI E A +LF EML
Sbjct: 378 --IAVTSMITALSQCDHGEGAIKLF-------------------------------MEML 404
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G P+ SS+L A AS+++ E+GK +H +IK F D F G AL TYAK G IE
Sbjct: 405 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 464
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ F +P++ +SW+ M+ GLA+ G+ K ++ LF M I PN +T+ SVL AC+
Sbjct: 465 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACN 524
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLVD+ +YFNSM+ ++ I HY+C++D+L R+G+L +A + +NSMPF+ +++ W
Sbjct: 525 HAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVW 584
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL + +K+ ++ + A + L+ L E +VLL+N YAS+G W + VRKLM +
Sbjct: 585 GALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDS 644
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++K SWVEV+++VH F +P
Sbjct: 645 NIKKEPAMSWVEVKDKVHTFIVGDKSHP 672
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 175/382 (45%), Gaps = 69/382 (18%)
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV NE + K + D +LG V + GF V V N+L+ + G +D A
Sbjct: 5 GVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDA 61
Query: 239 RSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
R VFD +R+ VSW ++ +++ G+A ++F EM WS
Sbjct: 62 RRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM------VWS------------ 103
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+P FS V++A + + +G VHA V+++G EKDVF +NAL
Sbjct: 104 -------------GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANAL 150
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+Y K G ++F+ + + D VVSWN++I G LNG
Sbjct: 151 VDMYVKMGRVDIASVIFEKMPDSD---VVSWNALISGCVLNGH----------------- 190
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+H+ +L+ +M SG +PN SS+L A A + + G+ +HG +
Sbjct: 191 ----------DHRAIELLL----QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK D ++G L D YAK+ ++ + +VFD M ++ I W ++ G + G E+
Sbjct: 237 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 296
Query: 538 NLFEEMEKTSITPNELTILSVL 559
++F + K + N T+ +VL
Sbjct: 297 SIFYGLRKEGLGVNRTTLAAVL 318
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM-PDKNEISWTV 522
V + G +H + GF DVF+ AL Y G ++ +RRVFD ++N +SW
Sbjct: 20 VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 79
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ ++ ++I +F EM + I P E V+ AC+ S +D G + ++M
Sbjct: 80 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAG-RQVHAMVVRM 138
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ + +VDM + GR+ A MP + D +W +L+SGC ++ RA
Sbjct: 139 GYEKDVFTANALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGHDH---RA 194
Query: 643 VKNLWKLAEEH--PAGYVLLSNIYASAG 668
++ L ++ P ++L S + A AG
Sbjct: 195 IELLLQMKSSGLVPNVFMLSSILKACAG 222
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 115/321 (35%), Gaps = 80/321 (24%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +LK S R +H K G + ++ L+ Y +A + ++
Sbjct: 313 TLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC 372
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER-------------------------- 116
+ D++ MI A Q + E A +LF M +
Sbjct: 373 SSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 432
Query: 117 -------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ + AL+ + K G +E++ F P + V+SW+A I G Q+G
Sbjct: 433 QVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHG 492
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
AL+LF ++++ G+ PN +T +S+ AC
Sbjct: 493 HGKRALELFGRMVDEGINPNHITMTSVLCACNH--------------------------- 525
Query: 224 SLITLSLKMGEVDLARSVFDRMEK-----RDVVSWTVILDVFIEMGDLGEARRIFDEMP- 277
G VD A+ F+ M++ R ++ ++D+ G L +A + + MP
Sbjct: 526 --------AGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 577
Query: 278 ERNEVSWSVMIARYNQSGYPE 298
+ N W ++ PE
Sbjct: 578 QANASVWGALLGASRVHKDPE 598
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 327/600 (54%), Gaps = 32/600 (5%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+E T L+ + ++ E + F+ P +N+ SWTA + +++ GF EA LF +LL
Sbjct: 82 HEFVTTKLLQMYARNCSFENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLL 141
Query: 177 ESGVKP--NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
GV+ + F + K C + LG + G+ K G+
Sbjct: 142 YEGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHD------------------GD 183
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIAR 290
+ A +F R ++ S+ ++ + E G+L +A+ +FD M + ++ +SW+ MI+
Sbjct: 184 MKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISG 243
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y +EA+ LFR + + +P++ VL+ A + ++R G H+ + G++ +
Sbjct: 244 YVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSN 303
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+ AL+++YSKC + ++ FD + E+D+ +WN++I GY Q E+ +EL
Sbjct: 304 SIVGGALVEMYSKCQDIVAAQMAFDGVSERDLP---TWNALISGYARCNQAEKIRELHQK 360
Query: 411 MPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
M + N +W+ II+GY+E+KQ+D +F EM ++ P+ T +L A + +A+
Sbjct: 361 MRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLAT 420
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
+++GK +H I+ G DV +G AL D YAK GD++ RV++ + + N +S M+
Sbjct: 421 IQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTA 480
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
A G+ +E I LF M + + P+ +T L+VL +C H+G ++ G + M YN+ P
Sbjct: 481 YAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVA-YNVMP 539
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+ +HYTC+VD+LSR+G+L EA + I ++P E D+ W +LL GC + + E A + L
Sbjct: 540 SLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKL 599
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
+L +P YV+L+N+YASAG+W R+LM + G++K GCSW+E R+ +H F K
Sbjct: 600 IELEPNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVAK 659
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 203/435 (46%), Gaps = 43/435 (9%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV----ISWTAAI 156
G+++ A +F ++ S+ A+I+G+ ++G + ++ F+R + V ISW + I
Sbjct: 182 GDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMI 241
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+V EA LF LL+ G++P+ T S+ CA++ R G L G +
Sbjct: 242 SGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQ 301
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ V +L+ + K ++ A+ FD + +RD+ +W ++ + + R + +M
Sbjct: 302 SNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKM 361
Query: 277 P----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
E N +W+ +IA Y ++ + A +LF +M + +P+ I+L+A + L +
Sbjct: 362 RRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATI 421
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
+ G VHA+ ++ G + DV I AL+D+Y+KCG+ K V++ I + +VS N+M+
Sbjct: 422 QRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPN---LVSHNAML 478
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
Y ++G EE A+F ML S P+
Sbjct: 479 TAYAMHGHGEEG-------------------------------IALFRRMLASKVRPDHV 507
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
TF +VL + SLE G + ++ + T + D +++G + + + +
Sbjct: 508 TFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNL 567
Query: 513 P-DKNEISWTVMVRG 526
P + + ++W ++ G
Sbjct: 568 PTEADAVTWNALLGG 582
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 147/332 (44%), Gaps = 42/332 (12%)
Query: 70 RKSLEANE--IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
R+ EA+ IV+ L + +V ++ + ++ AQ FDG+ ER+ +W ALISG
Sbjct: 286 RRGKEAHSLAIVRGLQS-NSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISG 344
Query: 128 FMKHGRVE---ESMWYFERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ + + E E R+ F+ NV +W I G+V+N A++LF ++ + ++P+
Sbjct: 345 YARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPD 404
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
T I AC+ + + G V +AG + V + +L+ + K G
Sbjct: 405 IYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCG---------- 454
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
D+ R+++ + N VS + M+ Y G+ EE L
Sbjct: 455 ---------------------DVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIAL 493
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR+M +P+ F VLS+ +L G A ++ + + ++DL S+
Sbjct: 494 FRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSR 553
Query: 364 CGETKDG-RLVFDSIVEKDVAHVVSWNSMIGG 394
G+ + L+ + E D V+WN+++GG
Sbjct: 554 AGQLYEAYELIKNLPTEAD---AVTWNALLGG 582
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 153/351 (43%), Gaps = 59/351 (16%)
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
Y P+++ ++ +L + S G +HAH +K G F++ L+ +Y++
Sbjct: 45 YHEPPSSTTYASILDSCGSPIL---GKQLHAHSIKSGFNAHEFVTTKLLQMYAR------ 95
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
N E A +FD MP RN SW+A++ Y+E
Sbjct: 96 ----------------------------NCSFENACHVFDTMPLRNLHSWTALLRVYIEM 127
Query: 430 KQFDLVFAVFNEMLLSGEIPNKS--TFSSVLCASASVASLEKGKDLHGKIIK----LGFP 483
F+ F +F ++L G F VL + ++E G+ +HG +K +
Sbjct: 128 GFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSA 187
Query: 484 YDVFLG---------TALTDTYAKSGDIESSRRVFDRMP----DKNEISWTVMVRGLAES 530
+++F A+ Y ++G++ ++ +FDRM K+ ISW M+ G +
Sbjct: 188 FEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDG 247
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
E+ +LF ++ K I P+ T+ SVL C+ + +G K +S+ + ++ N
Sbjct: 248 SLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRG-KEAHSLAIVRGLQSNSIV 306
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTYKNEQIAE 640
+V+M S+ + A+ + + E D W +L+SG + + E+I E
Sbjct: 307 GGALVEMYSKCQDIVAAQMAFDGVS-ERDLPTWNALISGYARCNQAEKIRE 356
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
LL E P+ +T++S+L S S GK LH IK GF F+ T L YA++
Sbjct: 43 LLYHEPPSSTTYASIL---DSCGSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSF 99
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLF 560
E++ VFD MP +N SWT ++R E G+ +E+ LFE++ E + + VL
Sbjct: 100 ENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLK 159
Query: 561 ACSHSGLVDKG-------LKYFNSMEPIYNI-----KPNGRHYTCVVDMLSRSGRLSEAE 608
C V+ G LK+ M+ + + + + Y ++ +G L +A+
Sbjct: 160 ICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAK 219
Query: 609 DFINSMPFE---PDSNAWASLLSG 629
+ + M E D +W S++SG
Sbjct: 220 ELFDRMEQEGVQKDRISWNSMISG 243
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 303/573 (52%), Gaps = 36/573 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEIND 199
F++ P N+ +W I + + F++ +FL LL+ PN+ TF + KA +E+
Sbjct: 82 FDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKA 141
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
R+G +V G+ K F + + NSL+
Sbjct: 142 SRVGTAVHGMAIKLSFGMDLYILNSLVRF------------------------------- 170
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ GDL A R+F + ++ VSW+ MI+ + Q PE+A LF +M R + PN+
Sbjct: 171 YGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTM 230
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
VLSA A L G V +++ + GI+ D+ + NA++D+Y+KCG D + +FD + E
Sbjct: 231 VGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPE 290
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+DV SW M+ GY G + A+ +F+ MP + +W+ +IS Y ++ + A+F
Sbjct: 291 RDV---FSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIF 347
Query: 440 NEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
NE+ LS P++ T S L A A + +++ G +H I + G + L ++L D YAK
Sbjct: 348 NELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAK 407
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G +E + VF + +++ W+ M+ GL G K +I+LF EM++ + PN +T +V
Sbjct: 408 CGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNV 467
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSH+GLVD+G +F+ MEP+Y + P +HY C+VD+L R+G L EA + IN M P
Sbjct: 468 LCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTP 527
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
++ W +LL C + N ++ E A L KL + VLLSNIYA GRW +RK
Sbjct: 528 SASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRK 587
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LM + L+K GCS +E VH F + +P
Sbjct: 588 LMRDTELKKEPGCSSIEANGNVHEFLVGDNTHP 620
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 222/481 (46%), Gaps = 99/481 (20%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G DL + N ++ G+L A+RLF G+ ++ VSW ++IS
Sbjct: 158 GMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMIS----------------- 200
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
F Q +AL+LFLK+ V PN VT + ACA+ D G
Sbjct: 201 --------------AFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFG 246
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V I + G + +++CN+++ + K G VD A+ +FD M +RDV SWT++LD + +M
Sbjct: 247 RWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKM 306
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSCFSIV 322
GD AR +F+ MP + +W+V+I+ Y Q+G P+EA +F ++ KP+
Sbjct: 307 GDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVST 366
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LSA A L A+ G +H ++ + GI + + ++L+D+Y+KCG + VF S+ E+D
Sbjct: 367 LSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERD- 425
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
V W++MI G G++G+ + A +L F EM
Sbjct: 426 --VYVWSAMIAGLGMHGRGKAAIDL-------------------------------FFEM 452
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
+ PN TF++VLCA + +++G+ VF
Sbjct: 453 QEAKVKPNSVTFTNVLCACSHAGLVDEGR--------------VFF-------------- 484
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
V+ +P+ + MV L +G+ +E++ L EM S TP+ ++L AC
Sbjct: 485 HEMEPVYGVVPEMKH--YACMVDILGRAGFLEEAMELINEM---STTPSASVWGALLGAC 539
Query: 563 S 563
S
Sbjct: 540 S 540
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 189/370 (51%), Gaps = 15/370 (4%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ-MTRYSFKPNTSCFSIVLS 324
L AR +FD++P+ N +W+ +I Y S P ++F +F + + PN F V+
Sbjct: 75 LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIK 134
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + LKA R G VH +K+ D++I N+L+ Y CG+ +F I KD
Sbjct: 135 AASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKD--- 191
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE--HKQFDLVFA--VFN 440
VVSWNSMI + E+A ELF M + N + S + G L K+ DL F V +
Sbjct: 192 VVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCS 251
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+ G + + +++L S++ + L ++ + DVF T + D YAK G
Sbjct: 252 YIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPE----RDVFSWTIMLDGYAKMG 307
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-PNELTILSVL 559
D +++R VF+ MP K +W V++ ++G KE++ +F E++ + I P+E+T++S L
Sbjct: 308 DYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTL 367
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
AC+ G +D G + + I N + +VDM ++ G L +A + S+ E D
Sbjct: 368 SACAQLGAIDLG-GWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE-ERD 425
Query: 620 SNAWASLLSG 629
W+++++G
Sbjct: 426 VYVWSAMIAG 435
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 153/340 (45%), Gaps = 35/340 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL + N M++ + G++++AQ+LFD MPER+ SWT ++ G+ K G + + F P
Sbjct: 261 DLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMP 320
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFSSICKACAEINDFRLGL 204
+ + +W I + QNG EAL +F +L S + KP+EVT S ACA++ LG
Sbjct: 321 VKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGG 380
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I + G + + +SL+ + K G ++ A VF +E+RDV
Sbjct: 381 WIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDV-------------- 426
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
WS MIA G + A LF +M KPN+ F+ VL
Sbjct: 427 -----------------YVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLC 469
Query: 325 ALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A + + G + H G+ ++ ++D+ + G ++ + + + A
Sbjct: 470 ACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSA 529
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
V W +++G L+ +E + D + K + AI+
Sbjct: 530 SV--WGALLGACSLHMNVELGELASDQLLKLEPRNHGAIV 567
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 141/277 (50%), Gaps = 6/277 (2%)
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE-IPNKSTFSSVLC 459
++ A+ LFD +P+ N +W+ +I Y F +F ++L E +PNK TF V+
Sbjct: 75 LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIK 134
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A++ + + G +HG IKL F D+++ +L Y GD+ + R+F + K+ +S
Sbjct: 135 AASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVS 194
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W M+ A+ ++++ LF +ME+ ++ PN +T++ VL AC+ ++ G ++ S
Sbjct: 195 WNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFG-RWVCSYI 253
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
IK + ++DM ++ G + +A+ + MP E D +W +L G + A
Sbjct: 254 ERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIMLDGYAKMGDYD-A 311
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
R V N + E A + +L + Y G+ +A+ +
Sbjct: 312 ARLVFNAMPVKE--IAAWNVLISAYEQNGKPKEALAI 346
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/600 (32%), Positives = 316/600 (52%), Gaps = 10/600 (1%)
Query: 102 NLEEAQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNP--FQNVISWTAAIC 157
+L A +LFD P R+ + ++++ + G ++ + E P ++ +S+T +
Sbjct: 58 SLASALQLFDETPPPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVT 117
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
F + G + A+ +F +L V PNE T + A A + G + +
Sbjct: 118 SFARAGHAARAVAVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDG 177
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V +L+ + E+ AR++FD M R+ V+W V+L+ +++ + A +F +P
Sbjct: 178 FVIVATNLVHAYAGVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIP 237
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI-VLSALASLKALRSGM 336
ER+EVSW +I Y + +A + + QM + + ++ A A A+ G
Sbjct: 238 ERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQ 297
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H +LK G + F+ L+ Y CG ++ F D +H SWN+++
Sbjct: 298 QLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFR---LSDKSHTASWNALLAALL 354
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
NG + EA+ELFD+MP+R+ VSWS +ISGY++ + D+ +F ML + PN+ T +S
Sbjct: 355 RNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLAS 414
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK- 515
L A A +L++GK +H I+ L + L D YAK G I + + F+R+ DK
Sbjct: 415 ALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFNRVNDKF 474
Query: 516 NEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
+ +S W M+ LA GYA S++LF ++++TSI PN +T + VL AC H+G V KG Y
Sbjct: 475 SSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYY 534
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
F SM Y I+P +HY C+VD+L R+G L EAE ++ MP +PD W S+LS +
Sbjct: 535 FESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILSASRAQG 594
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N + ERA + L KL + H A + LSNIYA AG WI+ VRK + + L + G S +
Sbjct: 595 NVALGERAAEELAKLDQTHGASKIALSNIYADAGHWINVSVVRKELQDANLERLTGRSGI 654
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 210/441 (47%), Gaps = 35/441 (7%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ L+GF +V N +++A L A+ LFDGM RN V+W +++G++K ++ +
Sbjct: 173 RALDGFVIVATN-LVHAYAGVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAE 231
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIN 198
F R P ++ +SW I G++ +A+K +++++ E G EV + KACA +
Sbjct: 232 VFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYS 291
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + +I K GF+ H V +L+ G + LA+ F +K SW +L
Sbjct: 292 AVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLA 351
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ G + EAR +FD+MPER+ VSWS MI+ Y Q+G + A +LF M S +PN
Sbjct: 352 ALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVT 411
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ LSA+A L G +H +++ ++ +S+ LID+Y+KCG D F+ +
Sbjct: 412 LASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFNRVN 471
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+K + V WN+MI S I GY H DL
Sbjct: 472 DK-FSSVSPWNAMI--------------------------CSLAIHGY-AHMSLDL---- 499
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYA 497
F+++ + PN TF VL A ++ KGK + + G + + D
Sbjct: 500 FSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLG 559
Query: 498 KSGDIESSRRVFDRMPDKNEI 518
++G +E + ++ MP K ++
Sbjct: 560 RAGYLEEAEQLVSMMPMKPDV 580
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 168/430 (39%), Gaps = 108/430 (25%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
++++ + E N Y + L+K + V +G+ LH ++K G ++ L+
Sbjct: 260 AMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLV 319
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
Y A + + N ++ A ++ G + EA+ LFD MPER+ VSW+
Sbjct: 320 HFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWST 379
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ISG +VQ G S ALKLF +L + ++PN
Sbjct: 380 MISG-------------------------------YVQTGRSDMALKLFYSMLNTSIEPN 408
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
EVT +S A A+ G + I + +T +L G
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDYIMNRPVQ---------LTDNLSSG---------- 449
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-NEVS-WSVMIARYNQSGYPEEAF 301
++D++ + G + +A + F+ + ++ + VS W+ MI GY +
Sbjct: 450 ------------LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSL 497
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF Q+ R S KPN+ F VLSA HA
Sbjct: 498 DLFSQLQRTSIKPNSITFIGVLSAC-----------CHA--------------------- 525
Query: 362 SKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
G G+ F+S+ ++ + H + M+ G G +EEA++L MP + D
Sbjct: 526 ---GTVTKGKYYFESMTREYGIQPTIKH---YGCMVDLLGRAGYLEEAEQLVSMMPMKPD 579
Query: 417 VS-WSAIISG 425
V W +I+S
Sbjct: 580 VVIWGSILSA 589
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 309/574 (53%), Gaps = 48/574 (8%)
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
S + E +PF W A I F AL LF ++E+ V ++ + S + KAC+
Sbjct: 50 SSYSVEEDPFL----WNAVIKSFSHGVDPRNALLLFCLMIENSVSVDKFSISLVLKACSR 105
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ G+ V G + K G + + N LI L LK G + AR VFDRM +RD VS+ +
Sbjct: 106 LGFVDFGMQVHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSM 165
Query: 257 LDVFIEMGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+D +++ G + AR +FD MP ++N +SW+ MI+ Y QS
Sbjct: 166 IDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYTQS-------------------- 205
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
G++V + + EKD+ N+LID Y K +D + +F
Sbjct: 206 ------------------EDGVNVASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLF 247
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D + KDV V+W +MI GY G + +AK+LFD MP+R+ V+++++++GY+++K
Sbjct: 248 DLMPRKDV---VTWATMIDGYAKLGFVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAE 304
Query: 435 VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+FN+M + P+++T VL A A + L K D+H I+ F LG AL
Sbjct: 305 AIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALI 364
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
DTY+K G I+ S RVF+ + +K+ W M+ GLA G + + ++ ++EK SI P+++
Sbjct: 365 DTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDI 424
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T + VL ACSHSGLV +GL F M + I+P +HY C+VD+LSRSG + A++ I
Sbjct: 425 TFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEE 484
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP EP+ W + L+ C +K + E K+L+ +P+ +VLLSN+YAS G W +
Sbjct: 485 MPIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWKEV 544
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
VR M E+ LRK GCSW+E+ VH FF T
Sbjct: 545 RRVRTTMKERKLRKIPGCSWIELDGNVHEFFVDT 578
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 227/499 (45%), Gaps = 108/499 (21%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V G +HG L KTGI+ D
Sbjct: 99 VLKACSRLGFVDFGMQVHGFLRKTGIYS-------------------------------D 127
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L + NC+I ++ G L A+++FD MP+R+ VS+ ++I G++K G +E + F+ P
Sbjct: 128 LFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPR 187
Query: 147 Q--NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+ N+ISW I G+ Q+ E GV
Sbjct: 188 EKKNLISWNCMISGYTQS--------------EDGV------------------------ 209
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+V +F EK + NSLI +K ++ A+S+FD M ++DVV+W ++D + ++G
Sbjct: 210 NVASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLFDLMPRKDVVTWATMIDGYAKLG 269
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVL 323
+ +A+++FDEMP+R+ V+++ M+A Y Q+ Y EA +F M + S P+ + IVL
Sbjct: 270 FVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVL 329
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA+A L L + +H +++ + ALID YSKCG + VF+ I K +
Sbjct: 330 SAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSID 389
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF-AVFNEM 442
H WN+MIGG ++G E A ++ + KR+ K D+ F V N
Sbjct: 390 H---WNAMIGGLAIHGLGESAFDMLLQIEKRSI-------------KPDDITFIGVLNAC 433
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
SG + +LC + + + K+ G + D ++SG I
Sbjct: 434 SHSGLVKE-----GLLCFEL----MRRKHKIEPKLQHYG---------CMVDILSRSGSI 475
Query: 503 ESSRRVFDRMP-DKNEISW 520
E ++ + + MP + N++ W
Sbjct: 476 ELAKNLIEEMPIEPNDVIW 494
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 172/387 (44%), Gaps = 77/387 (19%)
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A+++ ++ DL+ N +I+ ++ +E+A+ LFD MP ++ V+W +I G+ K G V
Sbjct: 212 ASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLFDLMPRKDVVTWATMIDGYAKLGFV 271
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKA 193
++ F+ P ++V+++ + + G+VQN + EA+ +F + ES + P+E T + A
Sbjct: 272 HQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSA 331
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
A++ RL +V + H+ + ++ L K+G
Sbjct: 332 IAQLG--RLSKAV---------DIHLYIMDNKFRLGGKLG-------------------- 360
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
++D + + G + ++ R+F+E+ ++ W+ MI G E AF + Q+ + S K
Sbjct: 361 VALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIK 420
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F VL+A S G K+G L
Sbjct: 421 PDDITFIGVLNAC-----------------------------------SHSGLVKEGLLC 445
Query: 374 FDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYL 427
F+ + +E + H + M+ +G +E AK L + MP + NDV W ++
Sbjct: 446 FELMRRKHKIEPKLQH---YGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACS 502
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTF 454
HK+F+ V + L G N S+F
Sbjct: 503 NHKEFETGELVAKHLFLQGGY-NPSSF 528
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 324/589 (55%), Gaps = 39/589 (6%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L + F+++ R F++ P + + I + + + EAL+ F+ + ++ V+
Sbjct: 41 LNASFIQYAR-----QVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIV 95
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
T I K+CA + +G V L+ + GF V N+LI K+ ++ A +FD
Sbjct: 96 CFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFD 155
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ +D +++ ++ + G++ AR +FD+M +R+ VSW+ MI+ Y Q+G + + +
Sbjct: 156 GILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWII 215
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F++M +PN + VLS A L L G+ + + ++ +S A++++Y K
Sbjct: 216 FQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVK 275
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG DGRLVF D+M +R+ V+WSA+I
Sbjct: 276 CGAVDDGRLVF----------------------------------DHMARRDVVTWSAMI 301
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+GY ++ + + +F M + PN T SVL A A + S+E G+ + + G
Sbjct: 302 AGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLI 361
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+V++ +AL Y+K G+I +R++FD++P ++ ++W M+ GLA +G+A+++I L+ M
Sbjct: 362 SNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRM 421
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
++ + PN +T + ++ AC+H+G V+ GL++F SM +NI PN H+ C+VD+ RSGR
Sbjct: 422 KEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGR 481
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L +A +FI M EP+ W +LLS + + N ++AE A K L +L ++ YV+LSNI
Sbjct: 482 LIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNI 541
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YASAGRW +A+ VRKLM +K ++K+ SWVEV ++VH F +P+
Sbjct: 542 YASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPR 590
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 39/374 (10%)
Query: 90 HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
N +IN + +L A+ +FDG+ ++ +++ LIS + + G V + F++ +++
Sbjct: 134 QNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSI 193
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+SW A I + QNG + +F ++ + +PNE+T +++ CA++ D +GL + L
Sbjct: 194 VSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKL 253
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
++ V +++ + +K G VD R VFD M +RDVV+W
Sbjct: 254 NDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTW---------------- 297
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
S MIA Y Q+G EA LF M KPN VLSA A L
Sbjct: 298 ---------------SAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQL 342
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
++ +G + ++V G+ +V++++AL+ +YSKCG R +FD + ++D V+WN
Sbjct: 343 GSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRD---NVTWN 399
Query: 390 SMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
SMI G +NG E+A L++ M K N++++ +++ +L F M
Sbjct: 400 SMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSD 459
Query: 446 GEI-PNKSTFSSVL 458
I PN F+ ++
Sbjct: 460 HNISPNIEHFACIV 473
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 139/298 (46%), Gaps = 48/298 (16%)
Query: 73 LEANEIVKDLN-----GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
LE +K LN G +++V M+ ++ G +++ + +FD M R+ V+W+A+I+G
Sbjct: 244 LEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAG 303
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ ++GR S EAL+LF + + +KPN+VT
Sbjct: 304 YAQNGR-------------------------------SNEALELFENMKSAQIKPNDVTL 332
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
S+ ACA++ G + + G +V V ++L+ + K G + AR +FD++ +
Sbjct: 333 VSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQ 392
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRL 303
RD V+W ++ G +A +++ M E N +++ ++ +G+ E
Sbjct: 393 RDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEF 452
Query: 304 FRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALI 358
FR M + ++ PN F+ ++ RSG + A+ + ++ +E +V I L+
Sbjct: 453 FRSMRSDHNISPNIEHFACIVDLFC-----RSGRLIDAYEFICRMEVEPNVVIWGTLL 505
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 194/596 (32%), Positives = 311/596 (52%), Gaps = 65/596 (10%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+ V TA++ + K + ++ F P V + A + G V+ G EAL+LF +
Sbjct: 271 DRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMT 330
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
SG+ + V+ S + ACAE+ + GL V L K+GF+ V V N+
Sbjct: 331 RSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNA------------ 378
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
ILD++ + L EA +F EM +R+ VSW+ +IA Q+
Sbjct: 379 -------------------ILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNEC 419
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E+ +M RY +P+ + VL A A L++L G VH +K G+ D F+S+
Sbjct: 420 YEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSST 479
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
++D+Y KCG + EA++L D + +
Sbjct: 480 VVDMYCKCG----------------------------------MITEAQKLHDRIGGQEL 505
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSW++IISG+ +KQ + F+EML G P+ T+++VL A++A++E GK +HG+
Sbjct: 506 VSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQ 565
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
IIK D ++ + L D YAK G++ S +F++ + +SW M+ G A G E+
Sbjct: 566 IIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEA 625
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ +FE M++ ++ PN T ++VL ACSH GL+D G +YF M Y ++P H+ C+VD
Sbjct: 626 LEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVD 685
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L RS EA FI SMP E D+ W +LLS CK ++ ++AE A N+ +L + +
Sbjct: 686 ILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSV 745
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y+LLSN+YA +G+W+D R+LM + L+K GCSW+EV++++H F +P+
Sbjct: 746 YILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPR 801
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 212/446 (47%), Gaps = 40/446 (8%)
Query: 186 TFSSICKACAEINDFRL--GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
TFS + + CA L G + + +GF V N L+ + + G AR VFD
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M RD VSW +L + GD G A +F MP+ + VSW+ +++ Y Q G ++ L
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
+M R P+ + +++L A L+ L G+ +HA +K G+E DV +AL+D+Y K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C +E+A F M +RN VSW A I
Sbjct: 184 CRS----------------------------------LEDALRFFHGMGERNSVSWGAAI 209
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+G ++++Q+ +F +M G ++ ++SV + A++ L + LH IK F
Sbjct: 210 AGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFS 269
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D +GTA+ D YAK+ + +RR F +P+ + M+ GL +G E++ LF+ M
Sbjct: 270 ADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFM 329
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLK-YFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
++ I + +++ V AC+ +GL+ + +++ +++ R+ ++D+ +
Sbjct: 330 TRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN--AILDLYGKCK 387
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLS 628
L EA M + DS +W ++++
Sbjct: 388 ALVEAYLVFQEME-QRDSVSWNAIIA 412
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/557 (25%), Positives = 242/557 (43%), Gaps = 75/557 (13%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ + G A+ +FD MP R+ VSW +++ + G + F P +
Sbjct: 41 VSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPD 100
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW A + G+ Q G +++ L +++ GV P+ T + + KAC + D LG+ +
Sbjct: 101 VVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHA 160
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ K G E DV + + ++D++ + L +
Sbjct: 161 VAVKTGLEM-------------------------------DVRAGSALVDMYGKCRSLED 189
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A R F M ERN VSW IA Q+ LF QM R + ++ V + A+
Sbjct: 190 ALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAA 249
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ L + +HAH +K D + A++D+Y+K D R F S+ V +
Sbjct: 250 ITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQ---AC 306
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+M+ G G EA +LF M + SG FD+V
Sbjct: 307 NAMMVGLVRTGLGAEALQLFQFMTR----------SGI----GFDVV------------- 339
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ S V A A V +G +H IK GF DV + A+ D Y K + + V
Sbjct: 340 ----SLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLV 395
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F M ++ +SW ++ L ++ +++I EM + + P++ T SVL AC +GL
Sbjct: 396 FQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKAC--AGL- 452
Query: 569 DKGLKYFNSMEPIYNIKP----NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+ L+Y S+ IK + + VVDM + G ++EA+ + + + + +W
Sbjct: 453 -QSLEY-GSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQ-ELVSWN 509
Query: 625 SLLSGCKTYKNEQIAER 641
S++SG K + A++
Sbjct: 510 SIISGFSLNKQSEEAQK 526
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 152/640 (23%), Positives = 249/640 (38%), Gaps = 140/640 (21%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+A H ++ +G +++ LL MY + A + + D V N M+ A
Sbjct: 23 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAH 82
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+ A LF MP+ + VSW AL+SG+ + G +S+
Sbjct: 83 AGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSV--------------------- 121
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
G S E + GV P+ T + + KAC + D LG+ + + K G E V
Sbjct: 122 ---GLSVE-------MARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDV 171
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
++L+ + K ++ A F M +R
Sbjct: 172 RAGSALVDMYGKCRSLEDALRFFHGMGER------------------------------- 200
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N VSW IA Q+ LF QM R + ++ V + A++ L + +H
Sbjct: 201 NSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLH 260
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
AH +K D + A++D+Y+K D R F S+ V + N+M+ G G
Sbjct: 261 AHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQ---ACNAMMVGLVRTG 317
Query: 400 QMEEAKELFDNMPKR----NDVSWSAIIS------GYLEHKQ---------FDL------ 434
EA +LF M + + VS S + S GYL+ Q FD+
Sbjct: 318 LGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN 377
Query: 435 --------------VFAVFNE-------------------------------MLLSGEIP 449
+ VF E ML G P
Sbjct: 378 AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEP 437
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ T+ SVL A A + SLE G +HGK IK G D F+ + + D Y K G I ++++
Sbjct: 438 DDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLH 497
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
DR+ + +SW ++ G + + ++E+ F EM + P+ T +VL C++ ++
Sbjct: 498 DRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIE 557
Query: 570 KGLKYFNSMEPIYNIKPNGRHY--TCVVDMLSRSGRLSEA 607
G + I + G Y + +VDM ++ G + ++
Sbjct: 558 LGKQIHGQ---IIKQEMLGDEYISSTLVDMYAKCGNMPDS 594
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 157/368 (42%), Gaps = 49/368 (13%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA- 96
+QG +H IK+G + + +L +Y + +EA + +++ D V N +I A
Sbjct: 355 LQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAAL 414
Query: 97 ---------------------------------------NIQWGNLEEAQRLFDGMPERN 117
++++G++ + + G+
Sbjct: 415 EQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDA 474
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
VS T ++ + K G + E+ +R Q ++SW + I GF N S EA K F ++L+
Sbjct: 475 FVSST-VVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLD 533
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
GVKP+ T++++ CA + LG + G I K + ++L+ + K G +
Sbjct: 534 IGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPD 593
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV----SWSVMIARYNQ 293
+ +F++ +K D VSW ++ + G EA +F+ M + N V ++ ++ +
Sbjct: 594 SLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSH 653
Query: 294 SGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
G ++ R F MT RY +P F+ ++ L K + + + + +E D
Sbjct: 654 VGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKF---IRSMPLEADAV 710
Query: 353 ISNALIDL 360
I L+ +
Sbjct: 711 IWKTLLSI 718
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 206/702 (29%), Positives = 337/702 (48%), Gaps = 86/702 (12%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
SF+++ + C L Q R LH L+ T H+ +L RL+ +Y
Sbjct: 33 SFHAFFQRCFTLQ----------QARQLHSQLVLTTAHRLPFLAARLIAVY--------- 73
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
++ L A+++FD +P +
Sbjct: 74 ----------------------ARFAFLSHARKVFDAIPLES------------------ 93
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
+++ W + I V +G+ AL+L++++ + G P+ T + +AC+
Sbjct: 94 ----------LHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACS 143
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ L V + GF H+ V N L+ + K+G ++ AR +FD M R +VSW
Sbjct: 144 SLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNT 203
Query: 256 ILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
++ + D A R+F M + N V+W+ +++ + + G +E LF+ M
Sbjct: 204 MVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRG 263
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ ++VLS A + + G +H +V+K G E +F+ NALI Y K D
Sbjct: 264 IEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAH 323
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----------NDVSWSA 421
VF I K++ VSWN++I Y +G +EA F +M K N +SWSA
Sbjct: 324 KVFLEIKNKNL---VSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSA 380
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ISG+ + + +F +M L+ + N T SSVL A +A+L G++LHG I+
Sbjct: 381 VISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNM 440
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
++ +G L + Y K GD + VFD + ++ ISW ++ G G + ++ F
Sbjct: 441 MSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFN 500
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM + + P+ +T +++L ACSH+GLV G F+ M + I+PN HY C+VD+L R+
Sbjct: 501 EMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRA 560
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L EA D + +MP EP+ W +LL+ C+ YK+ I E + L + ++LLS
Sbjct: 561 GLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLS 620
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
NIYA+ GRW D+ VR KGL+K G SW+EVR +V+ F
Sbjct: 621 NIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTF 662
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 117/264 (44%), Gaps = 14/264 (5%)
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
++F +F+ F + L + N S +L++ + LH +++ FL
Sbjct: 7 ERFRSLFSRFQPIFLISHVHNDELIYSFHAFFQRCFTLQQARQLHSQLVLTTAHRLPFLA 66
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDK---NEISWTVMVRGLAESGYAKESINLFEEMEKT 546
L YA+ + +R+VFD +P + + + W ++R GY + ++ L+ EM K
Sbjct: 67 ARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKL 126
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD----MLSRSG 602
P+ T+ V+ ACS G Y + + ++ R++ VV+ M + G
Sbjct: 127 GFLPDGFTLPLVIRACS-----SLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLG 181
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL-WKLAEEHPAGYVLLS 661
R+ +A + M F +W +++SG ++ A R K + + + + + L
Sbjct: 182 RMEDARQLFDGM-FVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLL 240
Query: 662 NIYASAGRWIDAMNVRKLMTEKGL 685
+ +A G + + + + K+M +G+
Sbjct: 241 SSHARCGLYDETLELFKVMRTRGI 264
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 196/600 (32%), Positives = 315/600 (52%), Gaps = 10/600 (1%)
Query: 102 NLEEAQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNP--FQNVISWTAAIC 157
+L A +LFD P R+ + ++++ + G ++ + E P ++ +S+T +
Sbjct: 58 SLASALQLFDETPPPLRDATARNSILAALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVT 117
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
F + G + A+ +F +L V PNE T + A A + G + +
Sbjct: 118 AFARAGHAARAVAVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDG 177
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V +L+ + E+ AR++FD M R+ V+W V+L+ +++ + A +F +P
Sbjct: 178 FVIVATNLVHAYAGVLELCSARALFDGMTHRNTVTWNVMLNGYVKAKMIDMAAEVFWRIP 237
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI-VLSALASLKALRSGM 336
ER+EVSW +I Y + +A + + QM + + ++ A A A+ G
Sbjct: 238 ERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQ 297
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H +LK G + F+ L+ Y CG ++ F D +H SWN+++
Sbjct: 298 QLHTVILKNGFDALAFVQATLVHFYGCCGLIGLAQMTFR---LSDKSHTASWNALLAALL 354
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
NG + EA+ELFD+MP+R+ VSWS +ISGY++ + D+ +F ML + PN+ T +S
Sbjct: 355 RNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLAS 414
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK- 515
L A A +L++GK +H I+ L + L D YAK G I + + F+R+ DK
Sbjct: 415 ALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFNRVNDKF 474
Query: 516 NEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
+ +S W M+ LA GYA S++LF ++++TSI PN +T + VL AC H+G V KG Y
Sbjct: 475 SSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYY 534
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
F SM Y I+P +HY C+VD+L R+G L EAE ++ MP +PD W S+LS +
Sbjct: 535 FESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILSASRAQG 594
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N + ERA + L KL + H A + LSNIYA AG W + VRK + + L + G S +
Sbjct: 595 NVALGERAAEELAKLDQTHGASKIALSNIYADAGHWTNVSVVRKELQDANLERLTGRSGI 654
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 209/441 (47%), Gaps = 35/441 (7%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ L+GF +V N +++A L A+ LFDGM RN V+W +++G++K ++ +
Sbjct: 173 RALDGFVIVATN-LVHAYAGVLELCSARALFDGMTHRNTVTWNVMLNGYVKAKMIDMAAE 231
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIN 198
F R P ++ +SW I G++ +A+K +++++ E G EV + KACA +
Sbjct: 232 VFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYS 291
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + +I K GF+ V +L+ G + LA+ F +K SW +L
Sbjct: 292 AVTEGQQLHTVILKNGFDALAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLA 351
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ G + EAR +FD+MPER+ VSWS MI+ Y Q+G + A +LF M S +PN
Sbjct: 352 ALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVT 411
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ LSA+A L G +H +++ ++ +S+ LID+Y+KCG D F+ +
Sbjct: 412 LASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFNRVN 471
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+K + V WN+MI S I GY H DL
Sbjct: 472 DK-FSSVSPWNAMI--------------------------CSLAIHGY-AHMSLDL---- 499
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYA 497
F+++ + PN TF VL A ++ KGK + + G + + D
Sbjct: 500 FSQLQRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLG 559
Query: 498 KSGDIESSRRVFDRMPDKNEI 518
++G +E + ++ MP K ++
Sbjct: 560 RAGYLEEAEQLVSMMPMKPDV 580
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 168/430 (39%), Gaps = 108/430 (25%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
++++ + E N Y + L+K + V +G+ LH ++K G ++ L+
Sbjct: 260 AMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDALAFVQATLV 319
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
Y A + + N ++ A ++ G + EA+ LFD MPER+ VSW+
Sbjct: 320 HFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWST 379
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ISG +VQ G S ALKLF +L + ++PN
Sbjct: 380 MISG-------------------------------YVQTGRSDMALKLFYSMLNTSIEPN 408
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
EVT +S A A+ G + I + +T +L G
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDYIMNRPVQ---------LTDNLSSG---------- 449
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-NEVS-WSVMIARYNQSGYPEEAF 301
++D++ + G + +A + F+ + ++ + VS W+ MI GY +
Sbjct: 450 ------------LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSL 497
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF Q+ R S KPN+ F VLSA HA
Sbjct: 498 DLFSQLQRTSIKPNSITFIGVLSAC-----------CHA--------------------- 525
Query: 362 SKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
G G+ F+S+ ++ + H + M+ G G +EEA++L MP + D
Sbjct: 526 ---GTVTKGKYYFESMTREYGIQPTIKH---YGCMVDLLGRAGYLEEAEQLVSMMPMKPD 579
Query: 417 VS-WSAIISG 425
V W +I+S
Sbjct: 580 VVIWGSILSA 589
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/633 (31%), Positives = 327/633 (51%), Gaps = 70/633 (11%)
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
D+ F V+ C N+ G + G +V ALI+ ++K G V +
Sbjct: 206 DVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVV-NALITMYVKCGDVNTARLV 264
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F++ P ++ ISW A I G+ +NG E L+LF +++ V P+ +T +S+ AC + D
Sbjct: 265 FDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDD 324
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
RLG + G + + F + S+ NSLI + +G ++ A +VF R E RD+
Sbjct: 325 RLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDL---------- 374
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
VSW+ MI+ Y P++A ++ M P+ +
Sbjct: 375 ---------------------VSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIA 413
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
IVLSA + L L GM++H + G+ ++N+LID+Y+KC
Sbjct: 414 IVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCK--------------- 458
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY-LEHKQFDLVFAVF 439
+++A E+F + ++N VSW++II G + ++ F+ +F F
Sbjct: 459 -------------------CIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALF-FF 498
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
EM+ + PN T VL A A + +L GK++H ++ G +D F+ A+ D Y +
Sbjct: 499 REMIRRLK-PNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRC 557
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G +E + + F + D SW +++ G AE G + LF+ M +++++PNE+T +S+L
Sbjct: 558 GRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISIL 616
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACS SG+V +GL+YFNSM+ Y+I PN +HY CVVD+L RSG+L EA +FI MP +PD
Sbjct: 617 CACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPD 676
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
W +LL+ C+ + + ++ E A +N+++ Y+LLSN+YA G+W VRK+
Sbjct: 677 PAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKM 736
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
M + GL GCSWVEV+ VH F + +P+
Sbjct: 737 MRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQ 769
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 232/507 (45%), Gaps = 69/507 (13%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+S F++ G + ++ + F R +N+ SW + G+ + G EAL L+ ++L GVKP
Sbjct: 146 ALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKP 205
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ TF + + C + + G + + + GFE V V N+LIT+
Sbjct: 206 DVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITM-------------- 251
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+++ GD+ AR +FD+MP R+ +SW+ MI+ Y ++G E R
Sbjct: 252 -----------------YVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLR 294
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF M +Y P+ + V++A L R G +H +VL+ +D I N+LI +YS
Sbjct: 295 LFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYS 354
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
G +EEA+ +F R+ VSW+A+
Sbjct: 355 SVG----------------------------------LIEEAETVFSRTECRDLVSWTAM 380
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
ISGY + M G +P++ T + VL A + + +L+ G +LH + G
Sbjct: 381 ISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGL 440
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+ +L D YAK I+ + +F +KN +SWT ++ GL + E++ F E
Sbjct: 441 VSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFRE 500
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M + + PN +T++ VL AC+ G + G K ++ + +G ++DM R G
Sbjct: 501 MIR-RLKPNSVTLVCVLSACARIGALTCG-KEIHAHALRTGVSFDGFMPNAILDMYVRCG 558
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSG 629
R+ A S+ E S W LL+G
Sbjct: 559 RMEYAWKQFFSVDHEVTS--WNILLTG 583
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 179/380 (47%), Gaps = 44/380 (11%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L +F+ G+L +A +F M +RN SW+V++ Y ++G +EA L+ +M KP+
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPD 206
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
F VL + L G +H HV++ G E DV + NALI +Y KCG+ RLVFD
Sbjct: 207 VYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFD 266
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ +D +SWN+MI GY NG E LF M K
Sbjct: 267 KMPNRD---RISWNAMISGYFENGVCLEGLRLFGMMIK---------------------- 301
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+ V P+ T +SV+ A + G+ +HG +++ F D + +L
Sbjct: 302 YPV---------DPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPM 352
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y+ G IE + VF R ++ +SWT M+ G ++++ ++ ME I P+E+TI
Sbjct: 353 YSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITI 412
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEP----IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
VL ACS +D G+ + Y+I N ++DM ++ + +A +
Sbjct: 413 AIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANS-----LIDMYAKCKCIDKALEIF 467
Query: 612 NSMPFEPDSNAWASLLSGCK 631
+S E + +W S++ G +
Sbjct: 468 HST-LEKNIVSWTSIILGLR 486
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 161/313 (51%), Gaps = 11/313 (3%)
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW--NSMIGGYGLN 398
H L+I +E D ++ ALI L K+G V+ S V ++H+ N+++ +
Sbjct: 98 HELRIPVEDDAYV--ALIRLCEWKRARKEGSRVY-SYVSISMSHLSLQLGNALLSMFVRF 154
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G + +A +F M KRN SW+ ++ GY + FD +++ ML G P+ TF VL
Sbjct: 155 GNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVL 214
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
+ +L +G+++H +I+ GF DV + AL Y K GD+ ++R VFD+MP+++ I
Sbjct: 215 RTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRI 274
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW M+ G E+G E + LF M K + P+ +T+ SV+ AC G D+ + +
Sbjct: 275 SWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG-DDRLGRQIHGY 333
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ + ++ M S G + EAE + D +W +++SG Y+N +
Sbjct: 334 VLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECR-DLVSWTAMISG---YENCLM 389
Query: 639 AERAVKNLWKLAE 651
++A++ +K+ E
Sbjct: 390 PQKALET-YKMME 401
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 98/260 (37%), Gaps = 71/260 (27%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +C+L + G+ +H H ++TG+ + ++ +L MY
Sbjct: 511 TLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMY---------------- 554
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++ G +E A + F + + SW L++G+ + G+ + F+
Sbjct: 555 ---------------VRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQ 598
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
R ++ES V PNEVTF SI AC+
Sbjct: 599 R-------------------------------MVESNVSPNEVTFISILCACSRSGMVAE 627
Query: 203 GLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDV- 259
GL F + +K ++ ++ L + G+++ A +M K D W +L+
Sbjct: 628 GLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSC 687
Query: 260 ----FIEMGDLGEARRIFDE 275
+E+G+L A IF +
Sbjct: 688 RIHHHVELGELA-AENIFQD 706
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 313/581 (53%), Gaps = 41/581 (7%)
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
E M+ + R P ++ + I F + G L LF KL E G+ P+ T+ + KA
Sbjct: 91 EKMFKYIRYPC--LLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIG 148
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ + + GL+ K G E V NSLI + ++ D+ +
Sbjct: 149 YLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMK---------------- 192
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKP 314
+FDEMP+R+ +SW+VMI+ Y + E+A +F +M S P
Sbjct: 193 ---------------MLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMP 237
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + LSA +LK L G +H H ++ ++ I NAL+D+Y KCG R VF
Sbjct: 238 DEATVVSTLSACTALKRLELGKKIH-HYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVF 296
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+ + K+V + W +M+ GY G++EEA+ELF+ P R+ V W+A+I+GY++ +FD
Sbjct: 297 EEMPSKNV---ICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDE 353
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
A+F EM + P+K S+L A ++E+GK +H I + P D +GTAL +
Sbjct: 354 AVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIE 413
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G IE + +F + K+ SWT ++ GLA +G +++ LF +M++ + P+++T
Sbjct: 414 MYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDIT 473
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ VL ACSH GLV++G K+FNSM Y IKP HY C+VD+L R+G L+EAE+ I +
Sbjct: 474 FIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKI 533
Query: 615 PFEPDS---NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
P E + + SLLS C+ Y N ++ ER K L K + + LL+NIYA A RW
Sbjct: 534 PDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWE 593
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
D VR+ M + G++K+ GCS +EV + +H FF +P+
Sbjct: 594 DVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPE 634
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 193/434 (44%), Gaps = 66/434 (15%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
FD V N +I+ Q + + LFD MP+R+ +SW +ISG++K R E+++ F R
Sbjct: 170 FDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCR- 228
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+Q ESG+ P+E T S AC + LG
Sbjct: 229 ---------------MQE--------------ESGLMPDEATVVSTLSACTALKRLELGK 259
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + + + + N+L+ + K G + +AR+VF+ M ++V+ WT ++ + G
Sbjct: 260 KIHHYV-RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCG 318
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+L EAR +F+ P R+ V W+ MI Y Q +EA LFR+M KP+ +L+
Sbjct: 319 ELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLT 378
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A+ G +H + + I D + ALI++Y+KCG + +F + KD A
Sbjct: 379 GCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTA- 437
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
SW S+I G +NG+ +A ELF M +
Sbjct: 438 --SWTSIICGLAMNGKTSKALELFSKMKQ------------------------------- 464
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIE 503
+G P+ TF VL A + +E+G+ + ++ V L D ++G +
Sbjct: 465 AGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLN 524
Query: 504 SSRRVFDRMPDKNE 517
+ + ++PD+N+
Sbjct: 525 EAEELIKKIPDENK 538
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 178/397 (44%), Gaps = 67/397 (16%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G+L A ++F + + ++++I + + G + LF ++ P+ + V
Sbjct: 85 GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A+ L + + V K G+E D ++ N+LID+Y++ T +++FD + ++D
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRD-- 202
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V+SWN MI GY + E+A +F M +
Sbjct: 203 -VISWNVMISGYVKCRRFEDAINVFCRMQEE----------------------------- 232
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
SG +P+++T S L A ++ LE GK +H ++ + +G AL D Y K G +
Sbjct: 233 -SGLMPDEATVVSTLSACTALKRLELGKKIH-HYVRDNVKFTPIIGNALLDMYCKCGCLS 290
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAE--------------------------SGYAK--- 534
+R VF+ MP KN I WT MV G A +GY +
Sbjct: 291 IARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNR 350
Query: 535 --ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
E++ LF EM+ + P++ ++S+L C+ +G +++G K+ + I + T
Sbjct: 351 FDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQG-KWIHEFIDENRIPIDAVVGT 409
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+++M ++ G + +A + + + D+ +W S++ G
Sbjct: 410 ALIEMYAKCGFIEKALEIFYGLRVK-DTASWTSIICG 445
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 5/254 (1%)
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
V+D F ++ N +++ + G L A+ +F+ MP +N + WT ++SG+ G +EE+
Sbjct: 265 VRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEAR 324
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
FE +P ++V+ WTA I G+VQ EA+ LF ++ VKP++ S+ CA+
Sbjct: 325 ELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTG 384
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + I + V +LI + K G ++ A +F + +D SWT I+
Sbjct: 385 AIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIIC 444
Query: 259 VFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFK 313
G +A +F +M + +++++ +++ + G EE + F M Y K
Sbjct: 445 GLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIK 504
Query: 314 PNTSCFSIVLSALA 327
P + ++ L
Sbjct: 505 PKVEHYGCLVDLLG 518
>gi|297823509|ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325476|gb|EFH55896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 322/601 (53%), Gaps = 11/601 (1%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V T+ I+ K GR+ + F+ ++ ++W + + G EA+ LF +L S
Sbjct: 5 VRLTSKIASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRFS 64
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
KP++ +F++I C + + RLG + L+ ++GF V NSLI + K + A
Sbjct: 65 DSKPDDYSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTLSA 124
Query: 239 RSVFDRM--EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
VF M R+ V+W +L ++ A +F EMP+R +W++MI+ + Q G
Sbjct: 125 NKVFRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVPFAWNIMISGHAQCGK 184
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E RLF++M F+P+ FS +++A A + G VHA +++ G V N+
Sbjct: 185 IESCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHAVMVRNGWYSAVEAKNS 244
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
++ Y+K G D +SI +V VSWNS+I G+ ++A E+F P++N
Sbjct: 245 VLSFYAKLGCKDDVMRELESI---EVLTQVSWNSIIDACVKVGETDKALEVFRLAPEKNI 301
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
V+W+ +I+GY + + F EM+ SG + + +VL A + +A L GK +HG
Sbjct: 302 VTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 361
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+I GF ++G AL + YAK GDI+ S R F + +K+ +SW M+ G A ++
Sbjct: 362 LIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFGDIANKDLVSWNTMLFAFGVHGLADQA 421
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ L++ M + I P+ +T + +L CSHSGLV+KG F SM Y I H TC++D
Sbjct: 422 LELYDNMIASGIKPDNVTFIGLLTTCSHSGLVEKGCAIFESMVKDYGIPLEVDHVTCMID 481
Query: 597 MLSRSGRLSEAEDFI---NSMPFEPDSN-AWASLLSGCKTYKNEQIAERAVKNLWKLAE- 651
M R G L+EA+D NS+ +N +W +LL C T+ + ++ R V + K+AE
Sbjct: 482 MFGRGGHLAEAKDLATTYNSLVINASNNSSWEALLGACSTHWHTELG-REVSKVLKIAEP 540
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+VLLSN+Y S+GRW +A VR+ M E+G+RK+ GCSW+EV N+V F +P
Sbjct: 541 SEELSFVLLSNLYCSSGRWKEAEEVRREMVERGMRKTPGCSWIEVGNRVSTFVVGGSSHP 600
Query: 712 K 712
+
Sbjct: 601 R 601
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 225/492 (45%), Gaps = 71/492 (14%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
SF + + TC S V GR + +I++G + L+ MY +L A
Sbjct: 72 SFTAILSTC-------GSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTLSA 124
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
N++ +D+ H+ RNEV+W +L+ +M + E
Sbjct: 125 NKVFRDM-----CCHS------------------------RNEVTWCSLLFAYMNAEQFE 155
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
++ F P + +W I G Q G L+LF ++LES +P+ TFSS+ ACA
Sbjct: 156 AALDVFVEMPKRVPFAWNIMISGHAQCGKIESCLRLFKEMLESEFEPDCFTFSSLMNACA 215
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ ++ G V ++ + G+ V NS+++ K+G D + +E VSW
Sbjct: 216 DSSNVVYGWMVHAVMVRNGWYSAVEAKNSVLSFYAKLGCKDDVMRELESIEVLTQVSWNS 275
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
I+D +++G+ +A +F PE+N V+W+ MIA Y ++G E+A R F +M + +
Sbjct: 276 IIDACVKVGETDKALEVFRLAPEKNIVTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDSD 335
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ VL A + L L G +H ++ G + ++ NAL++LY+KCG+ K+ F
Sbjct: 336 HFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFG 395
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
I KD +VSWN+M+ +G++G ++A EL+DN
Sbjct: 396 DIANKD---LVSWNTMLFAFGVHGLADQALELYDN------------------------- 427
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTD 494
M+ SG P+ TF +L + +EKG + ++K G P +V T + D
Sbjct: 428 ------MIASGIKPDNVTFIGLLTTCSHSGLVEKGCAIFESMVKDYGIPLEVDHVTCMID 481
Query: 495 TYAKSGDIESSR 506
+ + G + ++
Sbjct: 482 MFGRGGHLAEAK 493
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+V S I +G++ A+++FD M R+ V+W+ +++ Y A+F ++
Sbjct: 4 LVRLTSKIASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRF 63
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
S P+ +F+++L S+ ++ G+ + +I+ GF + +L D Y K D S
Sbjct: 64 SDSKPDDYSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTLS 123
Query: 505 SRRVFD---------------------------------RMPDKNEISWTVMVRGLAESG 531
+ +VF MP + +W +M+ G A+ G
Sbjct: 124 ANKVFRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVPFAWNIMISGHAQCG 183
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+ + LF+EM ++ P+ T S++ AC+ S V G
Sbjct: 184 KIESCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYG 223
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/464 (37%), Positives = 277/464 (59%), Gaps = 11/464 (2%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPE-RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++ +I +L AR +FD+ P + W++MI Y+++ +E+ LF QM + +P
Sbjct: 93 LIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RP 151
Query: 315 NTS---CFSIVLSALASLKALRS-GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
++ F+ V +A + LR G +VH V+K G E D+F+ N+L+++YS D
Sbjct: 152 TSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDA 211
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+ VFD + ++DV ++W S++ GY + G++ A+ELFD MP RNDVSW+ +++GY+ H+
Sbjct: 212 KRVFDEMPQRDV---ITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHR 268
Query: 431 QFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
++ FN+ML E+ PN++ S+L A A + +L++GK +H I K +
Sbjct: 269 FYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNIS 328
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
TAL D YAK G I+ +RRVFD + ++ ++WT M+ GL+ G E + F EM
Sbjct: 329 TALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFK 388
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+++T+L VL CSHSGLV++GL F+ M P++ I P HY C++D+L R+GRL A +
Sbjct: 389 PDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFE 448
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EHPAGYVLLSNIYASAG 668
I SMP EPD AW +LLS C+ + + + ER + ++ +L H GYVLLSN+YAS G
Sbjct: 449 AIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMG 508
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+W VRK M+++G GCSW+E+ VH F +P+
Sbjct: 509 QWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPR 552
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 188/384 (48%), Gaps = 16/384 (4%)
Query: 141 FERNP-FQNVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEI 197
F++ P I W I + + S E+L LF ++L G ++ TF+ + AC+
Sbjct: 110 FDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRH 169
Query: 198 NDFR-LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
R G +V G++ K G+E + V NSL+ + + A+ VFD M +RDV++WT +
Sbjct: 170 PTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSV 229
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPN 315
+ + G+L AR +FD MP RN+VSW+VM+A Y + EA + F M + KPN
Sbjct: 230 VKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPN 289
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ +LSA A L AL G +H ++ K I IS ALID+Y+KCG R VFD
Sbjct: 290 EAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFD 349
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQ 431
+ ++D +++W SMI G ++G E F M K +D++ +++G
Sbjct: 350 GLHKRD---LLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGL 406
Query: 432 FDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+ ++F++M+ L G +P + ++ LE + I + DV
Sbjct: 407 VEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFE---AIKSMPMEPDVVAWR 463
Query: 491 ALTDTYAKSGDIESSRRVFDRMPD 514
AL GD++ R+ + + +
Sbjct: 464 ALLSACRIHGDVDLGERIINHIAE 487
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 157/351 (44%), Gaps = 22/351 (6%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+VKD D+ V N ++N + + +A+R+FD MP+R+ ++WT+++ G+ G + +
Sbjct: 183 VVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRA 242
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAE 196
F+ P +N +SW + G+V + F EAL+ F +L VKPNE SI ACA
Sbjct: 243 RELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAH 302
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ G + I K ++ +LI + K G +D AR VFD + KRD+++WT +
Sbjct: 303 LGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSM 362
Query: 257 LDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YS 311
+ G E F EM + ++++ ++ + SG EE +F M +
Sbjct: 363 ISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWG 422
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
P + ++ L L S + + +E DV AL+ G+ G
Sbjct: 423 IVPKLEHYGCLIDLLGRAGRLESAFEA---IKSMPMEPDVVAWRALLSACRIHGDVDLGE 479
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGL-------NGQMEEAKELFDNMPKRN 415
+ + I E + S GGY L GQ E ++ M +R
Sbjct: 480 RIINHIAE------LCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRG 524
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 147/349 (42%), Gaps = 69/349 (19%)
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ S F +L SL ++ +HA V+ G+ ++ + LI Y C R+V
Sbjct: 53 PSHSTFVQLLKKRPSLTQIK---QIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FD + + WN MI Y +E+ LF M L H +
Sbjct: 110 FDQF--PSLPPTIIWNLMIQAYSKTPSSQESLYLFHQM---------------LAHGR-- 150
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK-GKDLHGKIIKLGFPYDVFLGTAL 492
+K TF+ V A + +L G+++HG ++K G+ D+F+G +L
Sbjct: 151 ------------PTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSL 198
Query: 493 TDT-------------------------------YAKSGDIESSRRVFDRMPDKNEISWT 521
+ YA G++ +R +FD MP +N++SW
Sbjct: 199 VNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWA 258
Query: 522 VMVRGLAESGYAKESINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
VMV G + E++ F +M + PNE ++S+L AC+H G +D+G K+ +
Sbjct: 259 VMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQG-KWIHVYID 317
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
I + T ++DM ++ GR+ A + + + D W S++SG
Sbjct: 318 KNRILLSSNISTALIDMYAKCGRIDCARRVFDGL-HKRDLLTWTSMISG 365
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 192/548 (35%), Positives = 292/548 (53%), Gaps = 34/548 (6%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W I G+ + EA++++ + G+ N +T+ + KACA + D G ++ +
Sbjct: 45 WNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVL 104
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K GFE H+ V N+LI + + G LG A++
Sbjct: 105 KLGFESHLYVSNALINM-------------------------------YGSCGHLGLAQK 133
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FDEMPER+ VSW+ ++ Y Q E +F M K + V+ A SL
Sbjct: 134 VFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGE 193
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
+ ++ + +E DV++ N LID+Y + G R VFD + +++ VSWN+M
Sbjct: 194 WGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNL---VSWNAM 250
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GYG G + A+ELFD M +R+ +SW+ +I+ Y + QF +F EM+ S P++
Sbjct: 251 IMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDE 310
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
T +SVL A A SL+ G+ H I K D+++G AL D Y K G +E + VF
Sbjct: 311 ITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKE 370
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
M K+ +SWT ++ GLA +G+A +++ F M + + P+ + +L AC+H+GLVDKG
Sbjct: 371 MRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKG 430
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
L+YF SME +Y +KP +HY CVVD+LSRSG L A +FI MP PD W LLS +
Sbjct: 431 LEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQ 490
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
+ N +AE A K L +L + YVL SN YA + RW DA+ +R+LM + ++K G
Sbjct: 491 VHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGS 550
Query: 692 SWVEVRNQ 699
S +E+ Q
Sbjct: 551 SCIEMELQ 558
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 210/445 (47%), Gaps = 69/445 (15%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GF+ L V N +IN G+L AQ++FD MPER+
Sbjct: 107 GFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERD------------------------ 142
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
++SW + +CG+ Q E L +F + +GVK + VT + AC + ++
Sbjct: 143 -------LVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWG 195
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+ ++ I + E V + N+LI + + G V LAR VFD+M+ R++VSW ++ +
Sbjct: 196 VADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYG 255
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G+L AR +FD M +R+ +SW+ MI Y+Q+G EA RLF++M KP+ +
Sbjct: 256 KAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVAS 315
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLSA A +L G H ++ K ++ D+++ NALID+Y KCG + VF + +KD
Sbjct: 316 VLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKD 375
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
VSW S+I G +NG + A + F M + E Q
Sbjct: 376 ---SVSWTSIISGLAVNGFADSALDYFSRMLR--------------EVVQ---------- 408
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSG 500
P+ F +L A A ++KG + + K+ G ++ + D ++SG
Sbjct: 409 -------PSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSG 461
Query: 501 DIESSRRVFDRMP-DKNEISWTVMV 524
+++ + MP + + W +++
Sbjct: 462 NLQRAFEFIKEMPVTPDVVIWRILL 486
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 182/393 (46%), Gaps = 67/393 (17%)
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A +F ++ W++MI ++ S P EA R++ M R N + + A A
Sbjct: 29 KAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACA 88
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+ + G +HA VLK+G E +++SNALI++Y CG + VFD + E+D +VS
Sbjct: 89 RVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERD---LVS 145
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WNS++ GYG + K+F V VF M ++G
Sbjct: 146 WNSLVCGYG-------------------------------QCKRFREVLGVFEAMRVAGV 174
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT------------ 495
+ T V+ A S+ + I + DV+LG L D
Sbjct: 175 KGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARG 234
Query: 496 -------------------YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
Y K+G++ ++R +FD M ++ ISWT M+ +++G E+
Sbjct: 235 VFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEA 294
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ LF+EM ++ + P+E+T+ SVL AC+H+G +D G + ++ Y++K + ++D
Sbjct: 295 LRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQK-YDVKADIYVGNALID 353
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
M + G + +A + M + DS +W S++SG
Sbjct: 354 MYCKCGVVEKALEVFKEMR-KKDSVSWTSIISG 385
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 150/323 (46%), Gaps = 36/323 (11%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D+ + N +I+ + G + A+ +FD M RN VSW A+I G+ K G + + F+
Sbjct: 211 IDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAM 270
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
++VISWT I + Q G EAL+LF +++ES VKP+E+T +S+ ACA +G
Sbjct: 271 SQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGE 330
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I K + + V N+LI + K G V+ A VF M K+D VSWT I
Sbjct: 331 AAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSI-------- 382
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
I+ +G+ + A F +M R +P+ F +L
Sbjct: 383 -----------------------ISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILL 419
Query: 325 ALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A A + G+ + K+ G++ ++ ++DL S+ G + F+ I E V
Sbjct: 420 ACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRA---FEFIKEMPVT 476
Query: 384 -HVVSWNSMIGGYGLNGQMEEAK 405
VV W ++ ++G + A+
Sbjct: 477 PDVVIWRILLSASQVHGNIPLAE 499
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 153/334 (45%), Gaps = 23/334 (6%)
Query: 390 SMIGGYGLN-GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++I Y L+ + +A LF + + W+ +I G+ Q + ++N M G +
Sbjct: 15 NLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLL 74
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
N T+ + A A V + G +H +++KLGF +++ AL + Y G + +++V
Sbjct: 75 GNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKV 134
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS---HS 565
FD MP+++ +SW +V G + +E + +FE M + + +T++ V+ AC+
Sbjct: 135 FDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEW 194
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G+ D + Y N++ + ++DM R G + A + M + + +W +
Sbjct: 195 GVADAMVDYIEE----NNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWR-NLVSWNA 249
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
++ G N +A R + + +++ + + Y+ AG++ +A+ + K M E +
Sbjct: 250 MIMGYGKAGN-LVAARELFD--AMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKV 306
Query: 686 RKS--------GGCSW---VEVRNQVHFFFQKTD 708
+ C+ ++V H + QK D
Sbjct: 307 KPDEITVASVLSACAHTGSLDVGEAAHDYIQKYD 340
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 191/621 (30%), Positives = 327/621 (52%), Gaps = 54/621 (8%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
NCM++ I+ L EA+++FD MP RN VSW AL++G+ + GRV E+ F R P +NV+
Sbjct: 69 NCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVV 128
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + G+ +NG A +LF + ++V++ ++ + R +
Sbjct: 129 SWNAMVSGYARNGMVKRARELFDMMPWR----DDVSWLTMISGYIKRKHVREARE----L 180
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
F + SVCN+L++ +++G + A +F +M+ R+ VSW V++ + G +G A+
Sbjct: 181 FDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQ 240
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
R+FDEMPE++ +S + ++ Y Q+G + A+++F+ M
Sbjct: 241 RLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMP---------------------- 278
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+D N ++D + + D +F + ++D +SWN+
Sbjct: 279 -----------------HRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQ---ISWNA 318
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
++ GY G M+ A F P ++ +SW+ +ISGY + L+ +EM+ G P+
Sbjct: 319 ILQGYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKDEGALSLL----SEMIRGGLKPD 374
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
++T S V+ AS+ SL GK +H IK GF +D + ++L Y+K G I + +VF+
Sbjct: 375 QATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFE 434
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+ ++ ++W M+ A G A E++ +F+ M K P+ T LS+L AC+H G + +
Sbjct: 435 LILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYE 494
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G +F SM+ +N+ P HY+C+VD+L RSG + +A DF +P + + AW +L S C
Sbjct: 495 GCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFSVC 554
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
++ Q+ E +N+ K Y LLSNIYA+ W A +VR M E+GL+K G
Sbjct: 555 NSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETG 614
Query: 691 CSWVEVRNQVHFFFQKTDHNP 711
CSW+E++ +V F ++P
Sbjct: 615 CSWIELKGEVVTFSSNDSNHP 635
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 187/379 (49%), Gaps = 38/379 (10%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL Y + EA E+ + ++V N M++ + G ++ A+ LFD MP R++VSW
Sbjct: 102 LLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSW 161
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ISG++K V E+ F+ P A + G+V+ G+ A LF ++
Sbjct: 162 LTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTR--- 218
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N V+++ + A + + +F EK V +++ L+ G VD A V
Sbjct: 219 -NPVSWNVMITGYARAGS----MGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKV 273
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ-------- 293
F M RD V+W ++D F+ L +A ++F EMP+R+++SW+ ++ Y Q
Sbjct: 274 FKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSAN 333
Query: 294 ------------------SGYPEE-AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
SGY +E A L +M R KP+ + S+V+S ASL +L
Sbjct: 334 AWFRRAPNKDAISWNTLISGYKDEGALSLLSEMIRGGLKPDQATLSVVISICASLVSLGC 393
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VH +K G E D + ++LI +YSKCG + VF+ I+++D V+WN+MI
Sbjct: 394 GKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRD---TVTWNAMIAT 450
Query: 395 YGLNGQMEEAKELFDNMPK 413
Y +G +EA ++FD M K
Sbjct: 451 YAYHGLADEALKVFDMMTK 469
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 189/396 (47%), Gaps = 31/396 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHK-------ERYLTTRLLIM--YLGSRKSLEANEIV 79
++ S N++I G A G + GI + E+ + +R IM YL + A ++
Sbjct: 218 RNPVSWNVMITGYARAGSM---GIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVF 274
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
KD+ D V N M++ ++ L++A +LF MP+R+++SW A++ G+++ G ++ +
Sbjct: 275 KDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANA 334
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
+F R P ++ ISW I G+ G AL L +++ G+KP++ T S + CA +
Sbjct: 335 WFRRAPNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVS 390
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G V K GFE V +SLI++ K G + A VF+ + +RD V+W ++
Sbjct: 391 LGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIAT 450
Query: 260 FIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKP 314
+ G EA ++FD M + + ++ +++ GY E FR M ++ P
Sbjct: 451 YAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVP 510
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ +S ++ L RSG A+ I D + A L+S C G +
Sbjct: 511 RSDHYSCMVDLLG-----RSGFIHQAYDFTRRIPSD-HRTTAWETLFSVC--NSHGEIQL 562
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
I+ ++V + + S G Y L + AKE++ +
Sbjct: 563 GEIIARNV--LKARPSDGGMYTLLSNIYAAKEMWSS 596
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 328/623 (52%), Gaps = 58/623 (9%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
NCM++ I+ L EA+++FD MP RN VSW AL++G+ + GRV E+ F R P +NV+
Sbjct: 69 NCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVV 128
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKP--NEVTFSSICKACAEINDFRLGLSVFG 208
SW A + G+ +NG A +LF + P ++V++ ++ + R
Sbjct: 129 SWNAMVSGYARNGMVKRARELF------DMMPWRDDVSWLTMISGYIKRKHVREARE--- 179
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+F + SVCN+L++ +++G + A +F +M+ R+ VSW V++ + G +G
Sbjct: 180 -LFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGI 238
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A+R+FDEMPE++ +S + ++ Y Q+G + A+++F+ M
Sbjct: 239 AQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMP-------------------- 278
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+D N ++D + + D +F + ++D +SW
Sbjct: 279 -------------------HRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQ---ISW 316
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+++ GY G M+ A F P ++ +SW+ +ISGY + L+ +EM+ G
Sbjct: 317 NAILQGYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKDEGALSLL----SEMIRGGLK 372
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+++T S V+ AS+ SL GK +H IK GF +D + ++L Y+K G I + +V
Sbjct: 373 PDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQV 432
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+ + ++ ++W M+ A G A E++ +F+ M K P+ T LS+L AC+H G +
Sbjct: 433 FELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYL 492
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+G +F SM+ +N+ P HY+C+VD+L RSG + +A DF +P + + AW +L S
Sbjct: 493 YEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFS 552
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C ++ Q+ E +N+ K Y LLSNIYA+ W A +VR M E+GL+K
Sbjct: 553 VCNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKE 612
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
GCSW+E++ +V F ++P
Sbjct: 613 TGCSWIELKGEVVTFSSNDSNHP 635
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 187/379 (49%), Gaps = 38/379 (10%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL Y + EA E+ + ++V N M++ + G ++ A+ LFD MP R++VSW
Sbjct: 102 LLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSW 161
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ISG++K V E+ F+ P A + G+V+ G+ A LF ++
Sbjct: 162 LTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTR--- 218
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N V+++ + A + + +F EK V +++ L+ G VD A V
Sbjct: 219 -NPVSWNVMITGYARAG----SMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKV 273
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ-------- 293
F M RD V+W ++D F+ L +A ++F EMP+R+++SW+ ++ Y Q
Sbjct: 274 FKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSAN 333
Query: 294 ------------------SGYPEE-AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
SGY +E A L +M R KP+ + S+V+S ASL +L
Sbjct: 334 AWFRRAPNKDAISWNTLISGYKDEGALSLLSEMIRGGLKPDQATLSVVISICASLVSLGC 393
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VH +K G E D + ++LI +YSKCG + VF+ I+++D V+WN+MI
Sbjct: 394 GKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRD---TVTWNAMIAT 450
Query: 395 YGLNGQMEEAKELFDNMPK 413
Y +G +EA ++FD M K
Sbjct: 451 YAYHGLADEALKVFDMMTK 469
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 186/394 (47%), Gaps = 31/394 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHK-------ERYLTTRLLIM--YLGSRKSLEANEIV 79
++ S N++I G A G + GI + E+ + +R IM YL + A ++
Sbjct: 218 RNPVSWNVMITGYARAGSM---GIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVF 274
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
KD+ D V N M++ ++ L++A +LF MP+R+++SW A++ G+++ G ++ +
Sbjct: 275 KDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWNAILQGYVQQGDMDSANA 334
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
+F R P ++ ISW I G+ G AL L +++ G+KP++ T S + CA +
Sbjct: 335 WFRRAPNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVS 390
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G V K GFE V +SLI++ K G + A VF+ + +RD V+W ++
Sbjct: 391 LGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIAT 450
Query: 260 FIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKP 314
+ G EA ++FD M + + ++ +++ GY E FR M ++ P
Sbjct: 451 YAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVP 510
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ +S ++ L RSG A+ I D + A L+S C G +
Sbjct: 511 RSDHYSCMVDLLG-----RSGFIHQAYDFTRRIPSD-HRTTAWETLFSVC--NSHGEIQL 562
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
I+ ++V + G Y L + AKE++
Sbjct: 563 GEIIARNVLKARPSDG--GMYTLLSNIYAAKEMW 594
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 205/586 (34%), Positives = 309/586 (52%), Gaps = 39/586 (6%)
Query: 132 GRVEESMWYFERNPFQ---NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
G + ++ FE N NV W + I G+ + +L LF ++L GV+PN TF
Sbjct: 76 GDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFP 135
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
+ K+C + G + K + V S+I + +GE+D AR VFD+ R
Sbjct: 136 FLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLR 195
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D VS+T ++ ++ G L +ARR+FDE+P ++ VSW+ MI+ Y QSG EEA F +M
Sbjct: 196 DAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQ 255
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+ PN S +VLSA ++ G + + V G ++ ++NALID+Y KCGET
Sbjct: 256 EANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGET- 314
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+ A+ELFD + +++ +SW+ +I GY
Sbjct: 315 ---------------------------------DIARELFDGIEEKDVISWNTMIGGYSY 341
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVF 487
++ A+F ML S PN TF +L A A + +L+ GK +H I K L +
Sbjct: 342 LSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNAS 401
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKT 546
L T+L D YAK G IE++ RVF M +N SW M+ G A G+A+ ++ LF EM K
Sbjct: 402 LWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKG 461
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
P+++T + VL AC+ +GLVD G +YF SM Y I P +HY C++D+L+R+ + E
Sbjct: 462 LFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEE 521
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE + +M EPD W SLLS CK + + E + L++L E+ +VLLSNIYA
Sbjct: 522 AEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAG 581
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
AGRW D +R + +KG++K GC+ +E+ VH F +P+
Sbjct: 582 AGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPE 627
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 231/528 (43%), Gaps = 105/528 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L K T +G+ LH H +K +H F+
Sbjct: 137 LFKSCTKAKATHEGKQLHAHALKLALH-------------------------------FN 165
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
VH +I+ G ++ A+ +FD R+ VS+TALI+G++ G ++++ F+ P
Sbjct: 166 PHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPV 225
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW A I G+VQ+G EA+ F ++ E+ V PN+ T + AC LG +
Sbjct: 226 KDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWI 285
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ GF ++ + N+LI + K GE D+AR +FD +E++DV+SW
Sbjct: 286 GSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISW------------- 332
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ MI Y+ EEA LF M R + KPN F +L A
Sbjct: 333 ------------------NTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHAC 374
Query: 327 ASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L AL G VHA++ K + + + +LID+Y+KCG + VF S+ +++A
Sbjct: 375 ACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLA-- 432
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKR-----NDVSWSAIISGYLEHKQFDLVFAVFN 440
SWN+M+ G+ ++G E A LF M + +D+++ ++S + DL F
Sbjct: 433 -SWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFR 491
Query: 441 EMLLSGEI---------------------------------PNKSTFSSVLCASASVASL 467
M+ I P+ + + S+L A + +
Sbjct: 492 SMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRV 551
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
E G+ + ++ +L P + L++ YA +G + R+ R+ DK
Sbjct: 552 EFGEYVAERLFQLE-PENAGAFVLLSNIYAGAGRWDDVARIRTRLNDK 598
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 163/415 (39%), Gaps = 90/415 (21%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD-SIVEKD 381
L+ L K + + +H+ ++K G+ VF+ + LI C + G L + S+ E++
Sbjct: 32 LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHF---CAVSPSGDLSYALSLFEEN 88
Query: 382 VAH----VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
H V WNS+I GY L+ +
Sbjct: 89 QQHHKHNVFIWNSLIRGYSLSSSPLSSL-------------------------------H 117
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY------------- 484
+F+ ML G PN TF + + + +GK LH +KL +
Sbjct: 118 LFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYA 177
Query: 485 ------------------DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
D TAL Y G ++ +RR+FD +P K+ +SW M+ G
Sbjct: 178 SVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISG 237
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
+SG +E+I F EM++ ++ PN+ T++ VL AC H+ + G K+ S
Sbjct: 238 YVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG-KWIGSWVRDNGFGS 296
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
N + ++DM + G A + + + E D +W +++ G Y + E A+
Sbjct: 297 NLQLTNALIDMYCKCGETDIARELFDGIE-EKDVISWNTMIGG---YSYLSLYEEALALF 352
Query: 647 WKLAEEH--PAGYVLLSNIYASA-------GRWIDAMNVRKLMTEKGLRKSGGCS 692
+ + P L ++A A G+W+ A +K LR S S
Sbjct: 353 EVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHA------YIDKNLRNSSNAS 401
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 13/259 (5%)
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
R +++ N++ F ++H C + G A + N WT+LI +
Sbjct: 357 RSNVKPNDVT-----FLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYA 411
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFS 188
K G +E + F +N+ SW A + GF +G + AL LF +++ G+ +P+++TF
Sbjct: 412 KCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFV 471
Query: 189 SICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME- 246
+ AC + LG F +I G + +I L + + + A + ME
Sbjct: 472 GVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEM 531
Query: 247 KRDVVSWTVILDVFIEMG--DLGE--ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ D W +L G + GE A R+F PE N ++ ++ Y +G ++ R
Sbjct: 532 EPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPE-NAGAFVLLSNIYAGAGRWDDVAR 590
Query: 303 LFRQMTRYSFKPNTSCFSI 321
+ ++ K C SI
Sbjct: 591 IRTRLNDKGMKKVPGCTSI 609
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 200/587 (34%), Positives = 307/587 (52%), Gaps = 73/587 (12%)
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
SG + + R+ F + P + + I G+ +A+ + ++ G+ P+
Sbjct: 87 SGSLPYARL-----VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRF 141
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
TF S+ K+C + + G + K GF + N+L
Sbjct: 142 TFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTL-------------------- 178
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
++++ G L AR++FD+M ++ VSW+ MI Y Q P EA +LFR
Sbjct: 179 -----------MNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFR 227
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
+M S KPN VL+A A + L + VH ++ + GI +++AL+D+Y KCG
Sbjct: 228 RMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCG 287
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
Y L A++LF+ MP++N W+ +I+G
Sbjct: 288 ----------------------------CYPL------ARDLFNKMPEKNLFCWNIMING 313
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
++E ++ ++FNEM LSG +K T +S+L A + +LE GK LH I K D
Sbjct: 314 HVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVD 373
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
V LGTAL D YAK G IES+ RVF MP+K+ ++WT ++ GLA G +++ LF EM+
Sbjct: 374 VALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQM 433
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ + P+ +T + VL ACSH+GLV++G+ YFNSM Y I+P+ HY C+VDML R+GR++
Sbjct: 434 SEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIA 493
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EAED I +MP PD LLS C+ + N +AERA + L +L ++ YVLLSNIY+
Sbjct: 494 EAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYS 553
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
S W A +R+LM E+ ++K GCS +EV VH F + +P+
Sbjct: 554 SMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQ 600
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 201/490 (41%), Gaps = 83/490 (16%)
Query: 33 SQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNC 92
S ++ +G+ LH H K G + Y+ L+ MY + A ++ + +V
Sbjct: 149 SCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWAT 208
Query: 93 MINANIQWGNLEEAQRLFDGMP----ERNEVSW--------------------------- 121
MI A QW EA +LF M + NE++
Sbjct: 209 MIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETG 268
Query: 122 --------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFL 173
+AL+ + K G + F + P +N+ W I G V++ EAL LF
Sbjct: 269 IGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFN 328
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
++ SGVK ++VT +S+ AC + LG + I K E V++ +L+ + K G
Sbjct: 329 EMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG 388
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIA 289
++ A VF M ++DV++WT ++ G +A +F EM + + +++ ++A
Sbjct: 389 SIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLA 448
Query: 290 RYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIG 346
+ +G E F M +Y +P+ + ++ L R+G A L +
Sbjct: 449 ACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLG-----RAGRIAEAEDLIQNMP 503
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG--------YGLN 398
+ D F+ L+ L S C G LV + E+ ++ + GG Y
Sbjct: 504 MAPDYFV---LVGLLSAC--RIHGNLV---VAERAAQQLIELDPKNGGTYVLLSNIYSSM 555
Query: 399 GQMEEAKELFDNMPKRN---DVSWSAI---------ISGYLEHKQFDLVFAVFNEMLL-- 444
E AK++ + M +RN SAI + G + H Q ++ ++M+
Sbjct: 556 KNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRL 615
Query: 445 --SGEIPNKS 452
+G +P+KS
Sbjct: 616 KSAGYVPDKS 625
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA--KSGDIESSRRVFDRMPDKNEISWTVM 523
++ + K +H ++++ D F + + A SG + +R VF+++P+ + +
Sbjct: 52 TMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSI 111
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+RG +++I ++ M + P+ T S+ +C G++ +G K +
Sbjct: 112 IRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEG-KQLHCHSTKLG 167
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ +++M S G L A + M +WA+++ Y + A+
Sbjct: 168 FASDAYIQNTLMNMYSNCGCLVSARKVFDKM-VNKSVVSWATMIGA---YAQWDLPHEAI 223
Query: 644 KNLWKL--AEEHPAGYVLLSNIYASAGRWID---AMNVRKLMTEKGL 685
K ++ A P + L N+ + R D A V K + E G+
Sbjct: 224 KLFRRMEIASVKP-NEITLVNVLTACARSRDLETAKQVHKYIDETGI 269
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 218/723 (30%), Positives = 343/723 (47%), Gaps = 106/723 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+++ T +V +G LHG ++++G ++ Y+ T L+ Y + EA + L+
Sbjct: 135 VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKT 194
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS-------------------------- 120
V +I + G + LF M E N V
Sbjct: 195 AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 254
Query: 121 -------------WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
LI + K RV+ F++ +N+ISWT I G++QN F +E
Sbjct: 255 YVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWE 314
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
A+KLF ++ G KP+ +S+ +C G V KA E V N LI
Sbjct: 315 AMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI- 373
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
D++ + L +A+++FD M E+N +S++ M
Sbjct: 374 ------------------------------DMYAKSNLLIDAKKVFDVMAEQNVISYNAM 403
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I Y+ EA LF +M F P+ F +L ASL AL +H ++K G+
Sbjct: 404 IEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGV 463
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D+F +ALID+YSKC KD R HV
Sbjct: 464 SLDLFAGSALIDVYSKCSYVKDAR------------HV---------------------- 489
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ M +++ V W+A+ GY +H + + +++ + S + PN+ TF++++ A++++ASL
Sbjct: 490 FEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASL 549
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
G+ H +++K+G + F+ AL D YAK G IE +R++F+ ++ + W M+
Sbjct: 550 RHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTH 609
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A+ G A+E++ +F EM K I PN +T ++VL ACSH+G V+ GL +FNSM P + IKP
Sbjct: 610 AQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPG 668
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CVV +L RSG+L EA++FI MP EP + W SLLS C+ N ++ + A +
Sbjct: 669 TEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAI 728
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK- 706
+ Y+LLSNI+AS G W D VR M + K G SW+EV N+V+ F +
Sbjct: 729 STDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARD 788
Query: 707 TDH 709
T H
Sbjct: 789 TTH 791
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/642 (25%), Positives = 276/642 (42%), Gaps = 131/642 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL+ S+N +I + +HG +I +G+ + +L
Sbjct: 33 LLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLA--------------------------- 65
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
N +IN + ++ A+ +FD MP +N ++W++++S +
Sbjct: 66 ----NILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYS----------------- 104
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLS 205
Q G+S EAL +F+ L +SG PNE +S+ +AC ++ G
Sbjct: 105 --------------QQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQ 150
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + ++GF++ V V SLI K G ++ AR VFD++ ++ V+WT I
Sbjct: 151 LHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI--------- 201
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
IA Y + G + LF QM + P+ S VLSA
Sbjct: 202 ----------------------IAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSA 239
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L+ L G +HA+VL+ G E DV + N LID Y+KC K GR +FD +V V ++
Sbjct: 240 CSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV---VKNI 296
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+SW +MI GY N EA +LF M N + W
Sbjct: 297 ISWTTMISGYMQNSFDWEAMKLFGEM---NRLGWK------------------------- 328
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P+ +SVL + S +LE+G+ +H IK D F+ L D YAKS + +
Sbjct: 329 ---PDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDA 385
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
++VFD M ++N IS+ M+ G + E++ LF EM P+ LT +S+L S S
Sbjct: 386 KKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL-GVSAS 444
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
+ K + + + + + + ++D+ S+ + +A M E D W +
Sbjct: 445 LFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNA 503
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
+ G + + A + L + + + P + + I A++
Sbjct: 504 MFFGYTQHLENEEALKLYSTL-QFSRQKPNEFTFAALITAAS 544
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 205/455 (45%), Gaps = 76/455 (16%)
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
++P F+++ + N + G I +G + + N LI + K VD AR
Sbjct: 23 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 82
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
VFD+M +++++W S M++ Y+Q GY EE
Sbjct: 83 VVFDKMPHKNLITW-------------------------------SSMVSMYSQQGYSEE 111
Query: 300 AFRLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A +F + R S + PN + V+ A L + G +H V++ G ++DV++ +LI
Sbjct: 112 ALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLI 171
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D YSK G ++ RLVFD + EK V+W ++I GY G+ + ELF M + N V
Sbjct: 172 DFYSKNGNIEEARLVFDQLSEKT---AVTWTTIIAGYTKCGRSAVSLELFAQMRETNVV- 227
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
P++ SSVL A + + LE GK +H ++
Sbjct: 228 ------------------------------PDRYVVSSVLSACSMLEFLEGGKQIHAYVL 257
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ G DV + L D Y K +++ R++FD+M KN ISWT M+ G ++ + E++
Sbjct: 258 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 317
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV---- 594
LF EM + P+ SVL +C +++G + Y IK N V
Sbjct: 318 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVH-----AYTIKANLESDEFVKNGL 372
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+DM ++S L +A+ + M E + ++ +++ G
Sbjct: 373 IDMYAKSNLLIDAKKVFDVMA-EQNVISYNAMIEG 406
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 181/434 (41%), Gaps = 50/434 (11%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
C +L S+ + QGR +H + IK + + ++ L+ MY S ++A ++ +
Sbjct: 333 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 392
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER-------------------------- 116
+++ +N MI L EA LF M R
Sbjct: 393 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSK 452
Query: 117 -------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ + +ALI + K V+++ FE ++++ W A G+ Q+
Sbjct: 453 QIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHL 512
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ EALKL+ L S KPNE TF+++ A + + R G + K G + V N
Sbjct: 513 ENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN 572
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER---- 279
+L+ + K G ++ AR +F+ RDVV W ++ + G+ EA +F EM +
Sbjct: 573 ALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP 632
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N V++ +++ + +G E+ F M + KP T ++ V+S L RSG
Sbjct: 633 NYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLG-----RSGKLFE 687
Query: 340 AH--VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
A + K+ IE + +L+ G + G+ + + D S+ + +
Sbjct: 688 AKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFAS 747
Query: 398 NGQMEEAKELFDNM 411
G + K++ D M
Sbjct: 748 KGMWADVKKVRDRM 761
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 316/597 (52%), Gaps = 68/597 (11%)
Query: 114 PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFL 173
P+++ + T LI + + G VEE+ F+ P ++V++WTA I G+ + ++ A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
++++ G PNE T SS+ K+C + G V G++ K G E + V N+++ +
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNM----- 155
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+ +V ++ A IF ++ +N+V+W+ +I +
Sbjct: 156 ----------------YATCSVTMEA---------ACLIFRDIKVKNDVTWTTLITGFTH 190
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G ++++QM + + C +I + A AS+ ++ +G +HA V+K G + ++ +
Sbjct: 191 LGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPV 250
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
N+++DLY +CG + EAK F M
Sbjct: 251 MNSILDLYCRCG----------------------------------YLSEAKHYFHEMED 276
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
++ ++W+ +IS LE +F G +PN TF+S++ A A++A+L G+ L
Sbjct: 277 KDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL 335
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRGLAESGY 532
HG+I + GF +V L AL D YAK G+I S+RVF + D+ N +SWT M+ G GY
Sbjct: 336 HGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGY 395
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
E++ LF++M + I P+ + ++VL AC H+GLV+KGLKYFN ME Y I P+ Y
Sbjct: 396 GAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYN 455
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK-NEQIAERAVKNLWKLAE 651
CVVD+L R+G++ EA + + MPF+PD + W ++L CK +K N I+ A + + +L
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKP 515
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
+ YV+LS IYA+ G+W+D VRK+M G +K G SW+ V NQV F F +D
Sbjct: 516 KMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQV-FSFAVSD 571
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 215/507 (42%), Gaps = 142/507 (28%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
+I + + G +EEA+ LFD MP+R+ V+WTA+I+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMIT-------------------------- 84
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
G+ + ++ A + F ++++ G PNE T SS+ K+C + G V G++ K
Sbjct: 85 -----GYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK 139
Query: 213 AGFEKHVSVCNSLI----TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
G E + V N+++ T S+ M + A +F ++ ++ V+WT ++ F +GD
Sbjct: 140 LGMEGSLYVDNAMMNMYATCSVTM---EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIG 196
Query: 269 ARRIFDEM-PERNEVS-WSVMIA------------------------------------- 289
+++ +M E EV+ + + IA
Sbjct: 197 GLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILD 256
Query: 290 RYNQSGYPEEAFRLFRQM---------------------------TRY---SFKPNTSCF 319
Y + GY EA F +M R+ F PN F
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTF 316
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ +++A A++ AL G +H + + G K+V ++NALID+Y+KCG D + VF IV+
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ ++VSW SM+ GYG +G EA ELFD
Sbjct: 377 RR--NLVSWTSMMIGYGSHGYGAEAVELFD------------------------------ 404
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+M+ SG P++ F +VL A +EKG K + + G D + + D +
Sbjct: 405 -KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 499 SGDIESSRRVFDRMPDK-NEISWTVMV 524
+G I + + +RMP K +E +W ++
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 176/452 (38%), Gaps = 109/452 (24%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV-KDLNGF 85
+LK + ++ G +HG ++K G+ Y+ ++ MY ++EA ++ +D+
Sbjct: 117 VLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVK 176
Query: 86 DLVVHNCMINANIQWGN------------LEEAQRL-------------FDGMPERNEVS 120
+ V +I G+ LE A+ D + ++
Sbjct: 177 NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIH 236
Query: 121 WTALISGFMKH--------------GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
+ + GF + G + E+ YF +++I+W I ++ S
Sbjct: 237 ASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSS 295
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EAL +F + G PN TF+S+ ACA I G + G IF+ GF K+V + N+LI
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 227 TLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+ K G + ++ VF + ++R++VSWT S
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVDRRNLVSWT------------------------------S 385
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM-HVHAHVLK 344
+MI Y GY EA LF +M +P+ F VLSA + G+ + + +
Sbjct: 386 MMIG-YGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
GI D I N ++DL G G++ EA
Sbjct: 445 YGINPDRDIYNCVVDL----------------------------------LGRAGKIGEA 470
Query: 405 KELFDNMP-KRNDVSWSAIISGYLEHKQFDLV 435
EL + MP K ++ +W AI+ HK L+
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKHNGLI 502
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 182/617 (29%), Positives = 325/617 (52%), Gaps = 66/617 (10%)
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
A ++WG + R+ + E + TAL+ + K G ++ FE+ +++I+W
Sbjct: 241 AALKWGKAVHS-RILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 299
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I G + G+ EA +++ ++ GV PN++T+ + AC G + + KAGF
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF 359
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ V N+LI++ + G + +AR +FD+
Sbjct: 360 TSDIGVQNALISM-------------------------------YSRCGSIKDARLVFDK 388
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
M ++ +SW+ MI +SG+ EA ++++M + +PN ++ +L+A +S AL G
Sbjct: 389 MVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWG 448
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H V++ G+ D + N L+++ Y
Sbjct: 449 RRIHQQVVEAGLATDAHVGNTLVNM----------------------------------Y 474
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+ G +++A+++FD M +R+ V+++A+I GY H +F+ + G P+K T+
Sbjct: 475 SMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYI 534
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
++L A A+ SLE +++H + K GF D +G AL TYAK G + VF++M +
Sbjct: 535 NMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKR 594
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
N ISW ++ G A+ G ++++ LFE M+ + P+ +T +S+L ACSH+GL+++G +YF
Sbjct: 595 NVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYF 654
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
SM + I P HY C+VD+L R+G+L EAE I +MPF+ ++ W +LL C+ + N
Sbjct: 655 CSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGN 714
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+AERA ++ KL ++ YV LS++YA+AG W A +RKLM ++G+ K G SW++
Sbjct: 715 VPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQ 774
Query: 696 VRNQVHFFFQKTDHNPK 712
V +++H+F + +P+
Sbjct: 775 VGDKLHYFVAEDRSHPQ 791
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 184/679 (27%), Positives = 307/679 (45%), Gaps = 141/679 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK ++ GR +H H+I+ ++Y L+ MY+ EA ++ K L+ +
Sbjct: 29 MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYME 88
Query: 87 LVVH--NCMINANIQWGNLEEAQRLFDGM------PERN-------------------EV 119
VH N M+ IQ+G +E+A +L M P+R E+
Sbjct: 89 RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148
Query: 120 SWTALISGFM--------------KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
+ A+ +G + K G +EE+ F++ ++V+SWT I G+ G S
Sbjct: 149 HFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRS 208
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
A ++F K+ + GV PN +T+ S+ A + + G +V I AG E +V +L
Sbjct: 209 ETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTAL 268
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+ + K G R VF+++ RD+++W +
Sbjct: 269 VKMYAKCGSYKDCRQVFEKLVNRDLIAW-------------------------------N 297
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
MI + GY EEA ++ QM R PN + I+L+A + AL G +H+ V K
Sbjct: 298 TMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKA 357
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G D+ + NALI +YS+CG KD RLVFD +V KD V+SW +MIGG +G EA
Sbjct: 358 GFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKD---VISWTAMIGGLAKSGFGAEA- 413
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
V+ EM +G PN+ T++S+L A +S A
Sbjct: 414 ------------------------------LTVYQEMQQAGVEPNRVTYTSILNACSSPA 443
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+LE G+ +H ++++ G D +G L + Y+ G ++ +R+VFDRM ++ +++ M+
Sbjct: 444 ALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIG 503
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG----------LVDKGLKYF 575
G A KE++ LF+ +++ + P+++T +++L AC++SG LV KG +F
Sbjct: 504 GYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG-GFF 562
Query: 576 ------NSMEPIYN---------------IKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
N++ Y K N + ++ ++ GR +A M
Sbjct: 563 SDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERM 622
Query: 615 PFE---PDSNAWASLLSGC 630
E PD + SLLS C
Sbjct: 623 KMEGVKPDIVTFVSLLSAC 641
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 170/583 (29%), Positives = 282/583 (48%), Gaps = 86/583 (14%)
Query: 113 MPERNEVSWTALISGFMKHGRVEES--MW----YFERNPFQNVISWTAAICGFVQNGFSF 166
+P++ V+ ALI+ +++ G +EE+ +W Y ER V SW A + G++Q G+
Sbjct: 55 VPDQYTVN--ALINMYIQCGSIEEARQVWKKLSYMERT----VHSWNAMVVGYIQYGYIE 108
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+ALKL ++ + G+ P+ T S +C G + +AG V V N ++
Sbjct: 109 KALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCIL 168
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ K G ++ AR VFD+MEK+ VVSWT+
Sbjct: 169 NMYAKCGSIEEAREVFDKMEKKSVVSWTIT------------------------------ 198
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
I Y G E AF +F++M + PN + VL+A +S AL+ G VH+ +L G
Sbjct: 199 -IGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAG 257
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
E D + AL+ +Y+KCG KD R VF+ +V +D +++WN+MIGG G EEA E
Sbjct: 258 HESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRD---LIAWNTMIGGLAEGGYWEEASE 314
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
V+N+M G +PNK T+ +L A + A+
Sbjct: 315 -------------------------------VYNQMQREGVMPNKITYVILLNACVNSAA 343
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L GK++H ++ K GF D+ + AL Y++ G I+ +R VFD+M K+ ISWT M+ G
Sbjct: 344 LHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGG 403
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
LA+SG+ E++ +++EM++ + PN +T S+L ACS ++ G + + +
Sbjct: 404 LAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLAT 462
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+ +V+M S G + +A + M + D A+ +++ G Y + + A+K
Sbjct: 463 DAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGG---YAAHNLGKEALKLF 518
Query: 647 WKLAEE----HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+L EE Y+ + N A++G A + L+ + G
Sbjct: 519 DRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGF 561
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 147/622 (23%), Positives = 260/622 (41%), Gaps = 117/622 (18%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L +S + G+A+H ++ G + + T L+ MY + ++ + L
Sbjct: 229 TYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL 288
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWT---------------- 122
DL+ N MI + G EEA +++ M N++++
Sbjct: 289 VNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGK 348
Query: 123 -------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
ALIS + + G ++++ F++ ++VISWTA I G ++G
Sbjct: 349 EIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSG 408
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
F EAL ++ ++ ++GV+PN VT++SI AC+ G + + +AG V N
Sbjct: 409 FGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGN 468
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L+ + G V AR VFDRM +RD+V +
Sbjct: 469 TLVNMYSMCGSVKDARQVFDRMIQRDIV-------------------------------A 497
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
++ MI Y +EA +LF ++ KP+ + +L+A A+ +L +H V
Sbjct: 498 YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVR 557
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K G D + NAL+ Y+KCG D +VF+ + +++ V+SWN++IGG +G+ ++
Sbjct: 558 KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRN---VISWNAIIGGSAQHGRGQD 614
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A +LF+ M + G P+ TF S+L A +
Sbjct: 615 ALQLFERMK-------------------------------MEGVKPDIVTFVSLLSACSH 643
Query: 464 VASLEKGKDLHGKIIK--LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISW 520
LE+G+ + + P G + D ++G ++ + + MP N W
Sbjct: 644 AGLLEEGRRYFCSMSQDFAIIPTIEHYG-CMVDLLGRAGQLDEAEALIKTMPFQANTRIW 702
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH----SGLVDKGLKYFN 576
++ G ++ + E ++S+ +L V A SH +G+ D K
Sbjct: 703 GALLGACRIHG----NVPVAERAAESSLKL-DLDNAVVYVALSHMYAAAGMWDSAAKLRK 757
Query: 577 SMEPIYNIKPNGRHYTCVVDML 598
ME K GR + V D L
Sbjct: 758 LMEQRGVTKEPGRSWIQVGDKL 779
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 159/338 (47%), Gaps = 50/338 (14%)
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A + + + + + N+S + +L +K L +G VH H+++ D + NALI+
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP--KRNDV 417
+Y +C G +EEA++++ + +R
Sbjct: 67 MYIQC----------------------------------GSIEEARQVWKKLSYMERTVH 92
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW+A++ GY+++ + + +M G P+++T S L + S +LE G+++H +
Sbjct: 93 SWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQA 152
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
++ G +DV + + + YAK G IE +R VFD+M K+ +SWT+ + G A+ G ++ +
Sbjct: 153 MQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAF 212
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY------ 591
+F++ME+ + PN +T +SVL A S + G + +++ N H
Sbjct: 213 EIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG-------KAVHSRILNAGHESDTAVG 265
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T +V M ++ G + + D AW +++ G
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGG 302
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 210/730 (28%), Positives = 367/730 (50%), Gaps = 111/730 (15%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F+S ++ C ++KD+ G+ +HG ++ +G + ++ L++MY + L
Sbjct: 157 EFTFSSVLKAC-SIVKDLRI------GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFL 209
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWT------- 122
++ + ++ ++V N + + +Q EA LF M + NE S +
Sbjct: 210 DSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT 269
Query: 123 ----------------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
AL+ + K G + +++ FE+ +++SW A
Sbjct: 270 GLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNA 329
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I G V + +AL+L ++ SG+ PN T SS KACA + LG + + K
Sbjct: 330 VIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMD 389
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
E + V L+ D++ + L +AR F+
Sbjct: 390 MESDLFVSVGLV-------------------------------DMYSKCDLLEDARMAFN 418
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+PE++ ++W+ +I+ Y+Q EA LF +M + N + S +L + A L+ +
Sbjct: 419 LLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHV 478
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
VH +K G D+++ N+LID Y KC +D +F+ E + +VS+ SMI
Sbjct: 479 CRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFE---ECTIGDLVSFTSMITA 535
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y GQ EEA +L +LE + +L P++
Sbjct: 536 YAQYGQGEEALKL------------------FLEMQDMELK-------------PDRFVC 564
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
SS+L A A++++ E+GK LH I+K GF D+F G +L + YAK G I+ + R F + +
Sbjct: 565 SSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE 624
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
+ +SW+ M+ GLA+ G+ ++++ LF +M K ++PN +T++SVL AC+H+GLV + Y
Sbjct: 625 RGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLY 684
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
F SME ++ KP HY C++D+L R+G+++EA + +N MPFE +++ W +LL + +K
Sbjct: 685 FESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHK 744
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+ ++ RA + L+ L E +VLL+NIYASAG+W + VR+LM + ++K G SW+
Sbjct: 745 DVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWI 804
Query: 695 EVRNQVHFFF 704
EV+++V+ F
Sbjct: 805 EVKDKVYTFL 814
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 224/489 (45%), Gaps = 70/489 (14%)
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
PF+ + F Q+ + L L K P V++S + C R GL
Sbjct: 20 PFKPAPKLIQTVPQFSQDPQTTAILNLIDK---GNFTPTSVSYSKLLSQCCTTKSLRPGL 76
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I K+G S+ N LI L + +
Sbjct: 77 QIHAHITKSGLSDDPSIRNHLINL-------------------------------YSKCR 105
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ G AR++ DE E + VSWS +I+ Y Q+G A F +M K N FS VL
Sbjct: 106 NFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + +K LR G VH V+ G E DVF++N L+ +Y+KC E D
Sbjct: 166 ACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLD--------------- 210
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+K LFD +P+RN VSW+A+ S Y++ +F EM+L
Sbjct: 211 -------------------SKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVL 251
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
SG PN+ + SS++ A + +GK +HG +IKLG+ +D F AL D YAK GD+
Sbjct: 252 SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLAD 311
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ VF+++ + +SW ++ G + ++++ L +M+++ I PN T+ S L AC+
Sbjct: 312 AISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAG 371
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
GL + G + +S+ + +++ + +VDM S+ L +A N +P E D AW
Sbjct: 372 MGLKELGRQLHSSLMKM-DMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWN 429
Query: 625 SLLSGCKTY 633
+++SG Y
Sbjct: 430 AIISGYSQY 438
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 181/363 (49%), Gaps = 47/363 (12%)
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+F P + +S +LS + K+LR G+ +HAH+ K G+ D I N LI+LYSKC
Sbjct: 51 NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNF--- 107
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
GY A++L D + + VSWSA+ISGY ++
Sbjct: 108 -----------------------GY--------ARKLVDESSEPDLVSWSALISGYAQNG 136
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
F+EM L G N+ TFSSVL A + V L GK +HG ++ GF DVF+
Sbjct: 137 LGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVAN 196
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
L YAK + S+R+FD +P++N +SW + + + E++ LF EM + I P
Sbjct: 197 TLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKP 256
Query: 551 NELTILSVLFACSHSGLVDKG---LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
NE ++ S++ AC +GL D + + ++ Y+ P +VDM ++ G L++A
Sbjct: 257 NEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSA--NALVDMYAKVGDLADA 312
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH--PAGYVLLSNIYA 665
+ +PD +W ++++GC +++ E+A++ L ++ P + L S + A
Sbjct: 313 ISVFEKIK-QPDIVSWNAVIAGCVLHEHH---EQALELLGQMKRSGICPNIFTLSSALKA 368
Query: 666 SAG 668
AG
Sbjct: 369 CAG 371
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 322/593 (54%), Gaps = 42/593 (7%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
+S+T ++ +K+ R++++ F++ P N+ +T I G+ +N +ALKLF ++
Sbjct: 13 LSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR 72
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
V V+++S+ K C + + LG++ +F EK+V +++ LK G V+LA
Sbjct: 73 DV----VSWNSMIKGCLDCGN--LGMAT--RLFDEMPEKNVISWTTMVNGYLKFGRVELA 124
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+ +F M +DV +W ++ + E G + E R+F+EMP R+ +SW+ MI + +G E
Sbjct: 125 QRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSE 184
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EA +F++M R +P S F+ VLSA A+ G+ VH HV+K+G FIS +LI
Sbjct: 185 EALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLI 244
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
Y+ C ++E A ++F+ +N V
Sbjct: 245 TFYANCM----------------------------------KIEHAHKIFNETLTKNVVK 270
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+A+++ Y+ + + VF +M G +PN+STFS L A + +L+KGK++H I
Sbjct: 271 WTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAI 330
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
KLG DVF+G +L Y + G++ S+ VF + +K+ +SW ++ G A+ G+ ++
Sbjct: 331 KLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALI 390
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
F +M + + PNE+T +L ACS SG++ KG +F + + +HY C+VD+L
Sbjct: 391 FFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDIL 450
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
R G+L EAE+ + MP + +S W +LLS C+ + N ++AERA K++ L + YV
Sbjct: 451 GRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYV 510
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LLSNIYASAGRW D +R M + GL K G SWV +R + H F +P
Sbjct: 511 LLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHP 563
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 231/503 (45%), Gaps = 102/503 (20%)
Query: 57 YLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
+L T+++ Y + + +A ++ ++ D+V N MI + GNL A RLFD MPE+
Sbjct: 44 HLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEK 103
Query: 117 NEVSWTALISGFMK-------------------------------HGRVEESMWYFERNP 145
N +SWT +++G++K +GRVEE + FE P
Sbjct: 104 NVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMP 163
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++VISWT+ I G NG S EAL +F K+L SGV+P TF+ + ACA +F LG+
Sbjct: 164 VRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQ 223
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V G + K G H + SLIT +++ A +F+ ++VV WT +L ++
Sbjct: 224 VHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYV---- 279
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
W + ++A R+F MT+ PN S FSI L A
Sbjct: 280 ------------------W---------NNKHQDALRVFGDMTKMGALPNQSTFSITLKA 312
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L+AL G +H +K+G+E DVF+ N+L+ +Y++CG VF +I EKD +
Sbjct: 313 CCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKD---I 369
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWNS+I G +G + L+F FN+M+
Sbjct: 370 VSWNSIIVGSAQHG-----------------------------FGLWALIF--FNQMIRR 398
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG---TALTDTYAKSGDI 502
G PN+ TF+ +L A + L KG+ I + + +V + D + G +
Sbjct: 399 GVDPNEITFTGLLSACSRSGMLLKGRCFFEYISR--YKSNVLRPQHYACMVDILGRCGKL 456
Query: 503 ESSRRVFDRMPDK-NEISWTVMV 524
+ + + MP K N + W ++
Sbjct: 457 DEAEELVRYMPVKANSMIWLALL 479
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 192/420 (45%), Gaps = 52/420 (12%)
Query: 218 HVSVCNSLITLS--------LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
H++ ITLS LK +D AR +FD++ ++ +T ++ + L +A
Sbjct: 3 HITRYTRTITLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDA 62
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
++FD M R+ VSW+ MI G A RLF +M
Sbjct: 63 LKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP--------------------- 101
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
EK+V +++ Y K G + + +F + KDVA +WN
Sbjct: 102 ------------------EKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVA---AWN 140
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+M+ GY NG++EE LF+ MP R+ +SW+++I G + + + VF +ML SG P
Sbjct: 141 AMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEP 200
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
STF+ VL A A+ G +HG ++KLG + F+ +L YA IE + ++F
Sbjct: 201 TWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIF 260
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+ KN + WT ++ + ++++ +F +M K PN+ T L AC +D
Sbjct: 261 NETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALD 320
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
KG K ++M ++ + +V M + G ++ A ++ E D +W S++ G
Sbjct: 321 KG-KEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDIVSWNSIIVG 378
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 148/398 (37%), Gaps = 131/398 (32%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +HGH++K G +++ L+ Y NCM
Sbjct: 221 GVQVHGHVVKLGCFFHEFISVSLITFYA-----------------------NCM------ 251
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+E A ++F+ +N V WTAL++ +
Sbjct: 252 --KIEHAHKIFNETLTKNVVKWTALLT-------------------------------AY 278
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
V N +AL++F + + G PN+ TFS KAC + G + + K G E V
Sbjct: 279 VWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDV 338
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V NSL+ + + G V+ A +VF + ++D+VSW I+ +G A
Sbjct: 339 FVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSII--------VGSA---------- 380
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
Q G+ A F QM R PN F+ +LSA + RSGM
Sbjct: 381 -------------QHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACS-----RSGM--- 419
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI--VEKDVAHVVSWNSMIGGYGL 397
+LK GR F+ I + +V + M+ G
Sbjct: 420 --LLK-------------------------GRCFFEYISRYKSNVLRPQHYACMVDILGR 452
Query: 398 NGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
G+++EA+EL MP K N + W A++S H ++
Sbjct: 453 CGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEV 490
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 184/552 (33%), Positives = 305/552 (55%), Gaps = 9/552 (1%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+++F +L G+ P+ ++ K CA ++ + G + +G V +SL+
Sbjct: 57 HVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLL 116
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF----DEMPERNEV 282
+ ++ + AR+VFD++ + VV+ + ++ F G + E + +F D E N V
Sbjct: 117 HMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLV 176
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ MI+ +N+SG +A +F+ M KP+ + S VL A+ L G+ +H +V
Sbjct: 177 SWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYV 236
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+K G+ D F+ +ALID+Y KC + VF+ + E DV + N+++ G NG ++
Sbjct: 237 IKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVG---ACNALVTGLSRNGLVD 293
Query: 403 EAKELFDNMPKR--NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
A E+F N VSW+++I+ ++ + +F EM + G PN T +L A
Sbjct: 294 NALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPA 353
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
++A+L GK H ++ G DV++G+AL D YAK G + +SR FD MP++N +SW
Sbjct: 354 CGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSW 413
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
++ G A G E+IN+FE M++ P+ ++ VL AC+ GL ++G YF+SM
Sbjct: 414 NSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSR 473
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+ ++ HY+C+V +L RSGRL EA I MPFEPDS W +LLS C+ + + E
Sbjct: 474 NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGE 533
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
A K +++L +P Y+LLSNIYAS W++ VR +M +GL+K+ G SW+E++N+V
Sbjct: 534 IAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKV 593
Query: 701 HFFFQKTDHNPK 712
H +P+
Sbjct: 594 HMLLAGDSSHPQ 605
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 199/369 (53%), Gaps = 14/369 (3%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
L + K + +V L G D VV + +++ +Q+ +L++A+ +FD +P+ V+ +ALIS
Sbjct: 90 LQTGKQMHCFALVSGL-GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALIS 148
Query: 127 GFMKHGRVEES--MWYFERNPFQ--NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
F + GRV+E+ ++Y R+ N++SW I GF ++G +A+ +F + G+KP
Sbjct: 149 RFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKP 208
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ + SS+ A +++ +G+ + + K G V ++LI + K VF
Sbjct: 209 DGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVF 268
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEA 300
+ M++ DV + ++ G + A +F + + N VSW+ MIA +Q+G EA
Sbjct: 269 NEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEA 328
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LFR+M KPN+ +L A ++ AL G H L+ GI DV++ +ALID+
Sbjct: 329 LELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDM 388
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRND 416
Y+KCG RL FD + ++ +VSWNS++ GY ++G+ EA +F+ M K +
Sbjct: 389 YAKCGRMLASRLCFDMMPNRN---LVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDH 445
Query: 417 VSWSAIISG 425
VS++ ++S
Sbjct: 446 VSFTCVLSA 454
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 158/343 (46%), Gaps = 49/343 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L + ++ + G +H ++IK G+ ++++ + L+ MY K A+E+
Sbjct: 216 VLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMY---GKCACASEM-------- 264
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+F+ M E + + AL++G ++G V+ ++ F++ F
Sbjct: 265 --------------------SGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQ--F 302
Query: 147 Q----NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ NV+SWT+ I QNG EAL+LF ++ GVKPN VT + AC I
Sbjct: 303 KGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLH 362
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + G V V ++LI + K G + +R FD M R++VSW ++ +
Sbjct: 363 GKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAM 422
Query: 263 MGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTS 317
G EA IF+ M + + VS++ +++ Q G EE + F M+R + +
Sbjct: 423 HGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARME 482
Query: 318 CFSIVLSALASLKALRSGM--HVHAHVLKIGIEKDVFISNALI 358
+S +++ L RSG +A + ++ E D + AL+
Sbjct: 483 HYSCMVTLLG-----RSGRLEEAYAMIKQMPFEPDSCVWGALL 520
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
+ +S I + + F V VF+ ML G +P+ +V+ A++++L+ GK +
Sbjct: 37 KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQM 96
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H + G D + ++L Y + ++ +R VFD++P ++ + ++ A G
Sbjct: 97 HCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRV 156
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
KE+ LF + + N ++ ++ + SG + F +M + +KP+G +
Sbjct: 157 KETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMH-LEGLKPDGTSVSS 215
Query: 594 VV 595
V+
Sbjct: 216 VL 217
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 107/265 (40%), Gaps = 71/265 (26%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T CLL + ++ G+A H ++ GI + Y+ + L+ MY
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMY---------------- 389
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G + ++ FD MP RN VSW +L++G+ HG+
Sbjct: 390 ---------------AKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGK--------- 425
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+FEA+ +F + G KP+ V+F+ + AC +
Sbjct: 426 ----------------------TFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEE 463
Query: 203 GLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF 260
G F + + G E + + ++TL + G ++ A ++ +M + D W +L
Sbjct: 464 GWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSC 523
Query: 261 -----IEMGDLGEARRIFDEMPERN 280
+++G++ A+R+F E+ RN
Sbjct: 524 RVHNRVDLGEIA-AKRVF-ELEPRN 546
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 332/618 (53%), Gaps = 18/618 (2%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
++HNC +++ A+ L + +E L+ + + G + + F+
Sbjct: 8 IIHNCKTLKSLK---SIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N WT+ I G+V+N EA LF+++ + T SS+ KA A + F+ G +V+
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + K GF + V NS++ L ++ +VD AR FD M ++D+VSW +++ + +
Sbjct: 125 GFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVD 184
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
AR+ FD MPERN VSW+ MI Y ++G EA LF M + + +++++S
Sbjct: 185 IARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMP----VKDLASWNVMVSGYM 240
Query: 328 SLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ G V+A ++ K+ I D N +I + K GE + + FD + K+V
Sbjct: 241 DI-----GDCVNARIIFGKMPIH-DTGSWNIMISGFCKAGELESAKDFFDRMPNKNV--- 291
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+SW M+ GY NG A+ LFD MP +N V+WS +I GY + Q +F
Sbjct: 292 ISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQ 351
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P+++ ++ A + + ++ + + + D+ + T+L D YAK G IE +
Sbjct: 352 DIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKA 411
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
++F+ K+ + ++ M+ LA G +++I LF++M++ +I P+ +T L VL AC+H
Sbjct: 412 LQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHG 471
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLVD+G KYF M + I+P+ +HY CVVD+L R G L EA + I +MP P S W +
Sbjct: 472 GLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGA 531
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL+ C+ + N Q+AE A L+K+ ++ Y+LLSNIYA+AGRW VR + E +
Sbjct: 532 LLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRV 591
Query: 686 RKSGGCSWVEVRNQVHFF 703
RK+ G SW+E+ + VH F
Sbjct: 592 RKNRGSSWIELSHVVHEF 609
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 183/376 (48%), Gaps = 42/376 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+A++G ++K G + + +L +++ RK A + ++ D+V N MI+
Sbjct: 120 GQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGN 179
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
++ A++ FD MPERN VSWT++I G++K G + E+ F+ P +++ SW + G+
Sbjct: 180 NDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGY 239
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ G A +F K+ + S CKA
Sbjct: 240 MDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKA-------------------------- 273
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
GE++ A+ FDRM ++V+SW ++LD +I+ GD AR +FD+MP +
Sbjct: 274 -------------GELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMK 320
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N V+WS MI Y ++G P +A LF + KP+ + ++SA + L + + +
Sbjct: 321 NLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESII 380
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ + + D+ + +LID+Y+KCG + +F+ KD ++ +++MI +G
Sbjct: 381 HNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKD---LLCYSTMIAALANHG 437
Query: 400 QMEEAKELFDNMPKRN 415
+A LFD M + N
Sbjct: 438 LGRDAIFLFDKMQRAN 453
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 217/714 (30%), Positives = 345/714 (48%), Gaps = 145/714 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR HG IK G+ Y+ LL MY R C
Sbjct: 156 GRRCHGISIKIGLDNNIYVGNALLGMYAKCR---------------------C------- 187
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+ +A + F +PE NEVS+TA++ G +V
Sbjct: 188 ---IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVN------------------------ 220
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE--INDFRL------------GLS 205
EA +LF +L + + + V+ SS+ C+ +F L G
Sbjct: 221 -------EAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQ 273
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF----- 260
V L K GFE + + NSL+ + K G +D A +F M + VVSW V++ +
Sbjct: 274 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 333
Query: 261 ------------------------------IEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
I+ GD+ R++FD M + SW+ +++
Sbjct: 334 SSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSG 393
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y+Q+ +EA +LFR+M S P+ + +I+LS+LA + L G VHA K D
Sbjct: 394 YSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTD 453
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+++++ LI +YSKCG ++E AK +FD
Sbjct: 454 IYLASGLIGMYSKCG----------------------------------KVEMAKRIFDR 479
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
+ + + V W+++++G + F F +M G P++ ++++VL A ++SL +G
Sbjct: 480 IAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQG 539
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ +H +I + G+ D F+G+AL D Y+K GD++++R VFD M KN ++W M+ G A++
Sbjct: 540 RQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQN 599
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G E++ L+E+M + P+ +T ++VL ACSHSGLVD G+K FNSM+ + ++P H
Sbjct: 600 GCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDH 659
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
YTC++D L R+GRL EAE I+ MP + D W LLS C+ Y + +A RA + L+ L
Sbjct: 660 YTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLD 719
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
++ A YVLL+NIY+S GRW DA VR+LM+ + K G SW+E +N + F
Sbjct: 720 PQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFM 773
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 158/668 (23%), Positives = 293/668 (43%), Gaps = 123/668 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL+ + + G+ +H H++++ + + +L+ RL+ Y
Sbjct: 11 LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFY-------------------- 50
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ ++ ++RLFD MP+R+ +W A++ + K +E++ F P
Sbjct: 51 -----------AKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPE 99
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N++SW I +NGF +AL ++ ++ G P T +S+ AC + D G
Sbjct: 100 RNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRC 159
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G+ K G + ++ V N+L+ + K R +
Sbjct: 160 HGISIKIGLDNNIYVGNALLGMYAK------CRCI------------------------- 188
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
G+A + F ++PE NEVS++ M+ S EAFRLFR M R ++ S VL
Sbjct: 189 GDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVC 248
Query: 327 ASLKALRSGMH--------------VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+ G+H VH +K G E D+ ++N+L+D+Y+K G +
Sbjct: 249 SRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEM 308
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGL----------------------------------- 397
+F ++ E VVSWN MI GYG
Sbjct: 309 IFVNMPE---VSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIK 365
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+G +E +++FD M + SW+ I+SGY +++ +F EM P+++T + +
Sbjct: 366 SGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAII 425
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L + A + LE G+ +H K F D++L + L Y+K G +E ++R+FDR+ + +
Sbjct: 426 LSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDI 485
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
+ W M+ GL+ + KE+ F++M + + P++ + +VL C+ + +G + +
Sbjct: 486 VCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQ 545
Query: 578 M--EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
+ E N G + ++DM S+ G + +A ++ M ++ W ++ G Y
Sbjct: 546 IAREGYMNDAFVG---SALIDMYSKCGDV-DAARWVFDMMLGKNTVTWNEMIHG---YAQ 598
Query: 636 EQIAERAV 643
+ AV
Sbjct: 599 NGCGDEAV 606
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 217/449 (48%), Gaps = 36/449 (8%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+S+ + C + G + + ++ + N LI K +D +R +FD+M
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
KRD+ +W IL + + +L +A +F EMPERN VSW+ +I+ ++G+ ++A ++ +
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M+R F P + VLSA +L + G H +KIG++ ++++ NAL+ +Y+KC
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 187
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAI 422
D F + E + VS+ +M+GG + Q+ EA LF M + + VS S++
Sbjct: 188 IGDAIQAFGDVPEPN---EVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSV 244
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+ + N++L +S G+ +H IK GF
Sbjct: 245 LGVCSRGGCGEFGLHDSNDVL---------------------SSDVHGQQVHCLTIKHGF 283
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+ L +L D YAK+G+++S+ +F MP+ + +SW VM+ G + + ++I +
Sbjct: 284 ESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQR 343
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ P+E+T +++L AC SG ++ G + F+ M P+ + ++ S++
Sbjct: 344 MQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSLSSWNTILSGYSQNE 398
Query: 603 RLSEAEDFINSMPF---EPDSNAWASLLS 628
EA M F PD A +LS
Sbjct: 399 NHKEAVKLFREMQFRSVHPDRTTLAIILS 427
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 179/354 (50%), Gaps = 26/354 (7%)
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ T+ + +L KA +G +HAH+L+ + D F+SN LI+ Y+KC R
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+FD + ++D+ +WN+++G Y ++E+A LF MP+RN VSW+ +IS +
Sbjct: 61 RLFDQMPKRDI---YTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGF 117
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
V+ M G +P T +SVL A ++ +E G+ HG IK+G ++++G A
Sbjct: 118 EQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNA 177
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L YAK I + + F +P+ NE+S+T M+ GLA+S E+ LF M + I +
Sbjct: 178 LLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVD 237
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC----------------VV 595
+++ SVL CS G + GL N + + +G+ C ++
Sbjct: 238 SVSLSSVLGVCSRGGCGEFGLHDSND---VLSSDVHGQQVHCLTIKHGFESDLHLNNSLL 294
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
DM +++G + AE +MP E +W +++G Y + + +A++ L ++
Sbjct: 295 DMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAG---YGQKSQSSKAIEYLQRM 344
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 217/493 (44%), Gaps = 71/493 (14%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ G+ +H IK G + +L LL MY + A I ++ +V N MI
Sbjct: 269 VHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGY 328
Query: 98 IQWGN----LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWT 153
Q +E QR+ E +E+++ ++ +K G +E F+ ++ SW
Sbjct: 329 GQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWN 388
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
+ G+ QN EA+KLF ++ V P+ T + I + A + G V + KA
Sbjct: 389 TILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKA 448
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF 273
F + + + LI + K G+V++A+ +FDR+ + D+
Sbjct: 449 VFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDI----------------------- 485
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
V W+ M+A + + +EAF F++M P+ ++ VLS A L +L
Sbjct: 486 --------VCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLS 537
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G VH+ + + G D F+ +ALID+YSKCG+ R VFD ++ K+ V+WN MI
Sbjct: 538 QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKN---TVTWNEMIH 594
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
GY NG +EA L++ +M+ SGE P+ T
Sbjct: 595 GYAQNGCGDEAVLLYE-------------------------------DMIGSGEKPDGIT 623
Query: 454 FSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
F +VL A + ++ G + + + G V T + D+ ++G + + + D+M
Sbjct: 624 FVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKM 683
Query: 513 PDK-NEISWTVMV 524
P K + I W V++
Sbjct: 684 PCKYDPIIWEVLL 696
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 145/347 (41%), Gaps = 53/347 (15%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
S++P+ + T +L + L+ GR +H K + YL + L+ MY
Sbjct: 414 SVHPDRT------TLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKC 467
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLE-EAQRLFDGMPER----NEVSW--- 121
K A I + D+V N M+ A + +L+ EA F M E+ ++ S+
Sbjct: 468 GKVEMAKRIFDRIAELDIVCWNSMM-AGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATV 526
Query: 122 --------------------------------TALISGFMKHGRVEESMWYFERNPFQNV 149
+ALI + K G V+ + W F+ +N
Sbjct: 527 LSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNT 586
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
++W I G+ QNG EA+ L+ ++ SG KP+ +TF ++ AC+ G+ +F
Sbjct: 587 VTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNS 646
Query: 210 IFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLG 267
+ + G E V +I + G + A + D+M K D + W V+L D+
Sbjct: 647 MQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVS 706
Query: 268 EARRIFDE---MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
ARR +E + +N + ++ Y+ G ++A + R++ Y+
Sbjct: 707 LARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDA-KAVRELMSYN 752
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 227/742 (30%), Positives = 348/742 (46%), Gaps = 109/742 (14%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY------- 66
+T FN+ T C++K T G +HG +IK G+ + ++ L+ MY
Sbjct: 24 DTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVD 83
Query: 67 --------LGSRKSLEANEIVKDL--NGF-----DLVVHN-------------------- 91
+ R + N I+ NGF D++V
Sbjct: 84 AAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPV 143
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
C ++Q G + G+ E V+ +L+ + K G + E+ F++N +N +S
Sbjct: 144 CAREVDVQMGIRIHGLAVKLGLSEDVRVN-NSLVDMYSKCGYLTEAQMLFDKNNRKNAVS 202
Query: 152 WTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
W I G G+ FEA LF ++ ++ ++ NEVT +I AC EI+ R + G
Sbjct: 203 WNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYS 262
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ GF+ V N + K G + A VF ME + V S
Sbjct: 263 IRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS------------------ 304
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
W+ +I Q+G P +A L+ QMT P+ +L A A LK
Sbjct: 305 -------------WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLK 351
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+LR G VH VL+ G+E D FI +L+ LY CGE+ RL
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARL------------------ 393
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
LFD M +++ VSW+A+ISGY ++ + +F +++ G P+
Sbjct: 394 ----------------LFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPS 437
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
SVL A + ++L GK+ H +K DVF+ + D YAKSG I+ SR VFD
Sbjct: 438 DIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFD 497
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+ +K+ SW ++ G +ESI LFE M K P+ T + +L CSH+GLV++
Sbjct: 498 GLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEE 557
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
GLKYFN M+ + I+P HY CV+DML R+GRL +A ++ MP +PDS W+SLLS C
Sbjct: 558 GLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFC 617
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
+ + +I + + L +L ++ YV LSN+YA +GRW D VR+++ + GL+K G
Sbjct: 618 RNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAG 677
Query: 691 CSWVEVRNQVHFFFQKTDHNPK 712
CSW+E+ +VH F + P+
Sbjct: 678 CSWIELGGKVHSFVAGDNLLPQ 699
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 230/515 (44%), Gaps = 80/515 (15%)
Query: 161 QNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+N +A+ +F+KL+ ++ + TF + KAC D LG + G++ K G V
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N+LI + K G VD A VF M R++VSW I
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSI----------------------- 103
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMT--RYSFKPNTSCFSIVLSALASLKALRSGMH 337
I+ ++++G+ ++ F + +M P+ + VL A ++ G+
Sbjct: 104 --------ISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIR 155
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+H +K+G+ +DV ++N+L+D+YSKCG + +++FD K+ VSWN+MIGG
Sbjct: 156 IHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKN---AVSWNTMIGGLCT 212
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
G + EA LF M + D+ N+ T ++
Sbjct: 213 KGYIFEAFNLFREMQMQEDIE------------------------------VNEVTVLNI 242
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L A ++ L K+LHG I+ GF YD + YAK G + + RVF M K
Sbjct: 243 LPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTV 302
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
SW ++ G A++G ++++NL+ +M + + P+ TI S+L A +H K L+Y
Sbjct: 303 NSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHL----KSLRYGKE 358
Query: 578 MEPI---YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
+ + ++ + ++ + G S A + M E S +W +++SG Y
Sbjct: 359 VHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGME-EKSSVSWNAMISG---YS 414
Query: 635 NEQIAERAVKNLWKLAEE--HPAGYVLLSNIYASA 667
+ E A+ KL + P+ ++S + A +
Sbjct: 415 QNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACS 449
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 41/347 (11%)
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
+A + Y + + +T F + F V+ A G +H V+K+G+
Sbjct: 3 VAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGL 62
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DVF+ NALI +Y K G VF + V ++VSWNS+I G+ NG +K+
Sbjct: 63 LLDVFVGNALIAMYGKFGFVDAAVKVFHYM---PVRNLVSWNSIISGFSENGF---SKDC 116
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE---IPNKSTFSSVLCASASV 464
FD + + +++GE +P+ +T +VL A
Sbjct: 117 FDMLVE-----------------------------MMAGEEGLLPDIATLVTVLPVCARE 147
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
++ G +HG +KLG DV + +L D Y+K G + ++ +FD+ KN +SW M+
Sbjct: 148 VDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMI 207
Query: 525 RGLAESGYAKESINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
GL GY E+ NLF EM+ + I NE+T+L++L AC + + LK + +
Sbjct: 208 GGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQL-RSLKELHGYSIRHG 266
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
+ + V ++ G L AE SM + N+W +L+ GC
Sbjct: 267 FQYDELVANGFVAAYAKCGMLICAERVFYSMETKT-VNSWNALIGGC 312
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 111/256 (43%), Gaps = 27/256 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-- 143
D+ V I+ + G ++E++ +FDG+ ++ SW A+I+ + HG EES+ FER
Sbjct: 472 DVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMR 531
Query: 144 --NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDF 200
+ ++ + G E LK F ++ G++P ++ +
Sbjct: 532 KVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRL 591
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM---EKRDVVSWTVIL 257
L L+ + + V +SL++ GE+++ + V +++ E ++V ++ +
Sbjct: 592 DDALR---LVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLS 648
Query: 258 DVFIEMGDLGEARRIFD-----EMPERNEVSWSVMIARYN----------QSGYPEEAFR 302
+++ G + RR+ + + SW + + + QS +R
Sbjct: 649 NLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWR 708
Query: 303 -LFRQMTRYSFKPNTS 317
L ++M + +KPNTS
Sbjct: 709 KLEKKMCKIGYKPNTS 724
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/698 (30%), Positives = 346/698 (49%), Gaps = 112/698 (16%)
Query: 29 KDITSQNLVIQGR----------ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI 78
+D+ S N+++ G L+ ++ GI + Y +L G+ + E+
Sbjct: 98 RDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREV 157
Query: 79 VKDLNGFD----LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ FD + V N +I ++ G++ A+ LFD MP R+ +SW A+ISG
Sbjct: 158 HAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISG------- 210
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
YFE N E L+LF ++ E + P+ +T +S+ AC
Sbjct: 211 -----YFE-------------------NDECLEGLELFFRMRELSIDPDLMTMTSVISAC 246
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ D RLG + + + ++ ++SV NSLI + L +G A SVF ME RDVVSWT
Sbjct: 247 ELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWT 306
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
I+ ++ + P++A ++ M P
Sbjct: 307 TIISGCVD-------------------------------NLLPDKALETYKTMEITGTMP 335
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + VLSA ASL L GM +H + G V ++N+LID+YSKC + +F
Sbjct: 336 DEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIF 395
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
I +KD V+SW S+I G +N + EA L
Sbjct: 396 HQIPDKD---VISWTSVINGLRINNRCFEA-----------------------------L 423
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F F +M+L + PN T S L A A V +L GK++H +K G +D FL A+ D
Sbjct: 424 IF--FRKMILKSK-PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILD 480
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y + G + ++ F+ + +K+ +W +++ G A+ G + LF+ M ++ I P+++T
Sbjct: 481 LYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVT 539
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+S+L ACS SG+V +GL+YF M+ Y+I PN +HY CVVD+L R+G+L+EA +FI M
Sbjct: 540 FISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERM 599
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P +PD W +LL+ C+ +++ + E A ++++K E Y+LL N+YA +G+W +
Sbjct: 600 PIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVA 659
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VR+ M E+GL GCSWVEV+ +VH F + +P+
Sbjct: 660 KVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQ 697
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 237/507 (46%), Gaps = 69/507 (13%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+S F++ G V + F R +++ SW + G+ + GF EAL L+ ++L +G++P
Sbjct: 74 ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ TF S+ ++CA D G V + + F+ V V N+LIT+ +K G+V AR +F
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D+M RD +SW + MI+ Y ++ E
Sbjct: 194 DKMPTRDRISW-------------------------------NAMISGYFENDECLEGLE 222
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF +M S P+ + V+SA L R G +H++V++ + ++ + N+LI +Y
Sbjct: 223 LFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYL 282
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
G K+ VF + +D VVSW + I
Sbjct: 283 SVGHWKEAESVFSGMECRD---VVSWTT-------------------------------I 308
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
ISG +++ D + M ++G +P++ T +SVL A AS+ L+ G LH + G
Sbjct: 309 ISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
V + +L D Y+K IE + +F ++PDK+ ISWT ++ GL + E++ F +
Sbjct: 369 ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M S PN +T++S L AC+ G + G K ++ + +G ++D+ R G
Sbjct: 429 MILKS-KPNSVTLISALSACARVGALMCG-KEIHAHALKAGMGFDGFLPNAILDLYVRCG 486
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSG 629
R+ A + N E D AW LL+G
Sbjct: 487 RMRTALNQFNLN--EKDVGAWNILLTG 511
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 225/506 (44%), Gaps = 78/506 (15%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK-HVSVCNSL 225
+ALK + E + E F ++ + C + G V+ + + V + N+L
Sbjct: 16 QALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNAL 75
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+++ ++ G+V A +VF RM +RD+ SW +
Sbjct: 76 LSMFVRFGDVGNAWNVFGRMGERDLFSW-------------------------------N 104
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
V++ Y ++G+ +EA L+ ++ +P+ F VL + A L G VHAHV++
Sbjct: 105 VLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRF 164
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
+ DV + NALI +Y KCG+ R++FD + +D +SWN+MI GY N + E
Sbjct: 165 DFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRD---RISWNAMISGYFENDECLEGL 221
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
ELF M E+ + P+ T +SV+ A +
Sbjct: 222 ELFFRM----------------------------RELSID---PDLMTMTSVISACELLG 250
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
G LH +++ + ++ + +L Y G + + VF M ++ +SWT ++
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP----I 581
G ++ +++ ++ ME T P+E+TI SVL AC+ G +D G+K E +
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
Y + N ++DM S+ R+ +A + + +P + D +W S+++G + N + E
Sbjct: 371 YVVVANS-----LIDMYSKCKRIEKALEIFHQIP-DKDVISWTSVINGLRI--NNRCFEA 422
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASA 667
+ + + P L+S + A A
Sbjct: 423 LIFFRKMILKSKPNSVTLISALSACA 448
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 328/623 (52%), Gaps = 58/623 (9%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
NCM++ I+ L EA+++FD MP RN VSW AL++G+ + GRV E+ F R P +NV+
Sbjct: 69 NCMVSGLIRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVV 128
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKP--NEVTFSSICKACAEINDFRLGLSVFG 208
SW A + G+ +NG A +LF + P ++V++ ++ + R
Sbjct: 129 SWNAMVSGYARNGMVKRARELF------DMMPWRDDVSWLTMISGYIKRKHVREARE--- 179
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+F + SVCN+L++ +++G + A +F +M+ R+ VSW V++ + G +G
Sbjct: 180 -LFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGI 238
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A+R+FDEMPE++ +S + ++ Y Q+G + A+++F+ M
Sbjct: 239 AQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVFKDMP-------------------- 278
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+D N ++D + + D +F + ++D +SW
Sbjct: 279 -------------------HRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQ---ISW 316
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++++ GY G M+ A F P ++ +SW+ +ISGY + L+ +EM+ G
Sbjct: 317 HAILQGYVQQGDMDSANVWFPRAPNKDAISWNTLISGYKDEGALSLL----SEMIRGGLK 372
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+++T S V+ AS+ SL GK +H IK GF +D + ++L Y+K G I + +V
Sbjct: 373 PDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQV 432
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+ + ++ ++W M+ A G A E++ +F+ M K P+ T LS+L AC+H G +
Sbjct: 433 FELILQRDTVTWNAMIATYAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYL 492
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+G +F SM+ +N+ P HY+C+VD+L RSG + +A DF +P + + AW +L S
Sbjct: 493 YEGCYHFRSMQEDWNLVPRSDHYSCMVDLLGRSGFIHQAYDFTRRIPSDHRTTAWETLFS 552
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C ++ Q+ E +N+ K Y LLSNIYA+ W A +VR M E+GL+K
Sbjct: 553 ACNSHGEIQLGEIIARNVLKARPSDGGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKE 612
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
GCSW+E++ +V F ++P
Sbjct: 613 TGCSWIELKGEVVTFSSNDSNHP 635
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 186/379 (49%), Gaps = 38/379 (10%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL Y + EA E+ + ++V N M++ + G ++ A+ LFD MP R++VSW
Sbjct: 102 LLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARELFDMMPWRDDVSW 161
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ISG++K V E+ F+ P A + G+V+ G+ A LF ++
Sbjct: 162 LTMISGYIKRKHVREARELFDSMPSPPTSVCNALLSGYVELGYMRAAEVLFGQMQTR--- 218
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N V+++ + A + + +F EK V +++ L+ G VD A V
Sbjct: 219 -NPVSWNVMITGYARAG----SMGIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKV 273
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ-------- 293
F M RD V+W ++D F+ L +A ++F EMP+R+++SW ++ Y Q
Sbjct: 274 FKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWHAILQGYVQQGDMDSAN 333
Query: 294 ------------------SGYPEE-AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
SGY +E A L +M R KP+ + S+V+S ASL +L
Sbjct: 334 VWFPRAPNKDAISWNTLISGYKDEGALSLLSEMIRGGLKPDQATLSVVISICASLVSLGC 393
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VH +K G E D + ++LI +YSKCG + VF+ I+++D V+WN+MI
Sbjct: 394 GKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRD---TVTWNAMIAT 450
Query: 395 YGLNGQMEEAKELFDNMPK 413
Y +G +EA ++FD M K
Sbjct: 451 YAYHGLADEALKVFDMMTK 469
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 186/394 (47%), Gaps = 31/394 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHK-------ERYLTTRLLIM--YLGSRKSLEANEIV 79
++ S N++I G A G + GI + E+ + +R IM YL + A ++
Sbjct: 218 RNPVSWNVMITGYARAGSM---GIAQRLFDEMPEKDVLSRTAIMRGYLQNGSVDAAWKVF 274
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
KD+ D V N M++ ++ L++A +LF MP+R+++SW A++ G+++ G ++ +
Sbjct: 275 KDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQISWHAILQGYVQQGDMDSANV 334
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
+F R P ++ ISW I G+ G AL L +++ G+KP++ T S + CA +
Sbjct: 335 WFPRAPNKDAISWNTLISGYKDEG----ALSLLSEMIRGGLKPDQATLSVVISICASLVS 390
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G V K GFE V +SLI++ K G + A VF+ + +RD V+W ++
Sbjct: 391 LGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIAT 450
Query: 260 FIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKP 314
+ G EA ++FD M + + ++ +++ GY E FR M ++ P
Sbjct: 451 YAYHGLADEALKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVP 510
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ +S ++ L RSG A+ I D + A L+S C G +
Sbjct: 511 RSDHYSCMVDLLG-----RSGFIHQAYDFTRRIPSD-HRTTAWETLFSAC--NSHGEIQL 562
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
I+ ++V + G Y L + AKE++
Sbjct: 563 GEIIARNVLKARPSDG--GMYTLLSNIYAAKEMW 594
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/737 (28%), Positives = 362/737 (49%), Gaps = 93/737 (12%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F ++ C CL +D + G +HG +++ G + + LL MY ++ +E+
Sbjct: 140 TFAIILKVCSCL-EDTS------LGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVES 192
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE----------------- 118
+ + + + V + +I +Q L A + F M + N
Sbjct: 193 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 252
Query: 119 ----------------------VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ TA + + K ++++ F+++ N S+ A I
Sbjct: 253 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMI 312
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+ Q F+AL LF +L+ SG+ +E++ S + +ACA + GL ++ L K+
Sbjct: 313 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLS 372
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
V V N+ I D++ + L EA R+FDEM
Sbjct: 373 LDVCVANAAI-------------------------------DMYGKCQALAEAFRVFDEM 401
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
R+ VSW+ +IA + Q+G E LF M R +P+ F VL A +L GM
Sbjct: 402 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGM 460
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H+ ++K G+ + + +LID+YSKCG ++ + ++
Sbjct: 461 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRT--------------N 506
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
++G MEE +++ + + VSW++IISGY+ +Q + +F M+ G P+K T+++
Sbjct: 507 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 566
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL A++AS GK +H ++IK DV++ + L D Y+K GD+ SR +F++ ++
Sbjct: 567 VLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRD 626
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
++W M+ G A G +E+I LFE M +I PN +T +S+L AC+H GL+DKGL+YF
Sbjct: 627 FVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFY 686
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
M+ Y + P HY+ +VD+L +SG++ A + I MPFE D W +LL C ++N
Sbjct: 687 MMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNN 746
Query: 637 -QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
++AE A L +L + + Y LLSN+YA AG W ++R+ M L+K GCSWVE
Sbjct: 747 VEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 806
Query: 696 VRNQVHFFFQKTDHNPK 712
+++++H F +P+
Sbjct: 807 LKDELHVFLVGDKAHPR 823
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 256/529 (48%), Gaps = 69/529 (13%)
Query: 82 LNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
L+GF V NC++ + A +FD MP R+ VSW +I+G+ K + ++ +
Sbjct: 34 LSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMINGYAKSNNMVKASF 93
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
+F P ++V+SW + + G++QNG + +++++F+ + +G + + TF+ I K C+ + D
Sbjct: 94 FFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLED 153
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG+ + G++ + G C++ DVV+ + +LD+
Sbjct: 154 TSLGMQIHGVVVRVG-------CDT------------------------DVVAASALLDM 182
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + E+ R+F +PE+N VSWS +IA Q+ A + F++M + + + S +
Sbjct: 183 YAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 242
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ VL + A+L LR G +HAH LK D + A +D+Y+KC +D +++FD
Sbjct: 243 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDK--- 299
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
LN Q S++A+I+GY + + +F
Sbjct: 300 --------------SENLNRQ-----------------SYNAMITGYSQEEHGFKALLLF 328
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+ ++ SG ++ + S V A A V L +G ++ IK DV + A D Y K
Sbjct: 329 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKC 388
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
+ + RVFD M ++ +SW ++ ++G E++ LF M ++ I P+E T SVL
Sbjct: 389 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVL 448
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
AC+ G + G++ +S+ + N ++DM S+ G + EAE
Sbjct: 449 KACT-GGSLGYGMEIHSSIVK-SGMASNSSVGCSLIDMYSKCGMIEEAE 495
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 210/440 (47%), Gaps = 44/440 (10%)
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CA+ LG + +GF V N L+ + + A VFDRM RDVVSW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+++ + + ++ +A F+ MP R+ VSW+ M++ Y Q+G ++ +F M R +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
+ F+I+L + L+ GM +H V+++G + DV ++AL+D+Y+K + V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F I EK+ VSW+++I G N + A + F M K N A +S
Sbjct: 196 FQGIPEKN---SVSWSAIIAGCVQNNLLSLALKFFKEMQKVN-----AGVS--------- 238
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+S ++SVL + A+++ L G LH +K F D + TA
Sbjct: 239 -----------------QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 281
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK +++ ++ +FD+ + N S+ M+ G ++ + +++ LF + + + +E+
Sbjct: 282 DMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 341
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEAED 609
++ V AC+ + +GL+ ++ IK + CV +DM + L+EA
Sbjct: 342 SLSGVFRACALVKGLSEGLQIYD-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFR 396
Query: 610 FINSMPFEPDSNAWASLLSG 629
+ M D+ +W ++++
Sbjct: 397 VFDEMR-RRDAVSWNAIIAA 415
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 39/249 (15%)
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A +LE GK H +I GF F+ L Y S D S+ VFDRMP ++ +SW
Sbjct: 17 AKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWN 76
Query: 522 VMVRGLAES--------------------------GYAK-----ESINLFEEMEKTSITP 550
M+ G A+S GY + +SI +F +M +
Sbjct: 77 KMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEF 136
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+ T +L CS G++ + + + + ++DM ++ R E+
Sbjct: 137 DGRTFAIILKVCSCLEDTSLGMQIHGVVVRV-GCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
+P E +S +W+++++GC +A + K + K+ AG + +IYAS R
Sbjct: 196 FQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV----NAG--VSQSIYASVLRS 248
Query: 671 IDAMNVRKL 679
A++ +L
Sbjct: 249 CAALSELRL 257
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 324/599 (54%), Gaps = 66/599 (11%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E N + +L+ + K + + F+ ++ +++ + + G+ G + EA++LFL+
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L SG+KP++ TF+++ A ++D + G V G + K F +V V N+L+ K +
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
VD E ++F EMPE + +S++V+I Y +
Sbjct: 292 VD-------------------------------EVGKLFXEMPELDGISYNVVITSYAWN 320
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G +E+F LFR++ F F+ +LS S LR G +H + +G + +
Sbjct: 321 GQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE 380
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NAL+D+Y+KC NG +EA+++FDN+ +
Sbjct: 381 NALVDMYAKC---------------------------------NGD-KEAQKIFDNIACK 406
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ V W+A+IS Y++ + + VF++M +G +++TF+S+L A A++AS+ G+ LH
Sbjct: 407 STVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLH 466
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
+I+ GF +V+ G+AL DTYAK G + + + F MP++N +SW ++ A++G
Sbjct: 467 SLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVD 526
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
++N F++M ++ P+ ++ LSVL ACSH G V++ L +FNSM IY + P HYT +
Sbjct: 527 GTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSM 586
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EH 653
VD+L R+GR EAE + MPFEP W+S+L+ C+ +KN ++A++A L+ + +
Sbjct: 587 VDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRD 646
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A Y+ +SNIYA AG+W + V+K M ++G+RK SWVE+++Q H F +P+
Sbjct: 647 AAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPE 705
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 128/241 (53%), Gaps = 3/241 (1%)
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ ++ A +L S + AH++K G + SN ++ + + G+ VFD + K
Sbjct: 13 VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ +S N MI G+ G++ +A+ELFD M +R VSW+ +I GYL+ Q F ++
Sbjct: 73 N---TISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYA 129
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+M G P+ T ++L + + +H +IKLG+ Y++ + +L D Y K+
Sbjct: 130 DMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTH 189
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+ + ++F M +K+ +++ ++ G + G +E+I LF E+ + I P++ T ++L
Sbjct: 190 CLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLS 249
Query: 561 A 561
A
Sbjct: 250 A 250
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 142/331 (42%), Gaps = 44/331 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG ++KT ++ LL Y + E ++ ++ D + +N +I +
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW 319
Query: 100 WGNLEEAQRLFDGMP----ERNEVSWTALIS---------------------GFMKHGRV 134
G +E+ LF + +R + + L+S G RV
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379
Query: 135 E--------------ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
E E+ F+ ++ + WTA I +VQ G E + +F + +GV
Sbjct: 380 ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGV 439
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
++ TF+SI +ACA + LG + L+ ++GF +V ++L+ K G + A
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGY 296
F M +R+ VSW ++ + + G++ F +M + + VS+ +++ + G+
Sbjct: 500 SFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGF 559
Query: 297 PEEAFRLFRQMTR-YSFKPNTSCFSIVLSAL 326
EEA F MT+ Y P ++ ++ L
Sbjct: 560 VEEALWHFNSMTQIYEVTPKREHYTSMVDVL 590
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 117/302 (38%), Gaps = 70/302 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL TS + GR +H I G + E + L+ MY EA +I ++
Sbjct: 348 LLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKS 407
Query: 87 LVVHNCMINANIQWGNLEEAQRLFD-----GMPE-------------------------- 115
V MI+A +Q G EE +F G+P
Sbjct: 408 TVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHS 467
Query: 116 --------RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
N S +AL+ + K G + +++ F P +N +SW A I + QNG
Sbjct: 468 LLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDG 527
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
L F ++++SG KP+ V+F S+ AC+ L F NS+
Sbjct: 528 TLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHF---------------NSMT- 571
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSV 286
+++ KR+ +T ++DV G EA ++ EMP E +E+ WS
Sbjct: 572 ------------QIYEVTPKRE--HYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617
Query: 287 MI 288
++
Sbjct: 618 VL 619
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 281/482 (58%), Gaps = 9/482 (1%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
C +L L + + A ++FD V + + ++ + I L A ++F ++ N
Sbjct: 25 CTTLSHLKIIHAHLIRAHTIFD------VFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
++ I ++ S P+++F + Q R P+ + ++ A +L G+ H
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+++ G + DV++ N+L+ +YS G+ K VF I DV VSW SM+ GY +G +
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDV---VSWTSMVAGYIKSGDV 195
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
A++LFD MP++N V+WS +ISGY ++ FD ++ + G N++ SV+ +
Sbjct: 196 TSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASC 255
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A + +LE G+ H I++ ++ LGTAL D YA+ G I+ + VFD++P ++ +SWT
Sbjct: 256 AHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWT 315
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ G A GYA++++ F MEK +TP E+T +VL ACSH GLV++GL+ F SM+
Sbjct: 316 TLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRD 375
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
Y I+P HY C+VD+L R+G+L+EAE F+N MP +P++ W +LL C+ +KN +IAER
Sbjct: 376 YRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAER 435
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A K L +L EH YVLLSNIYA +W + N+R++M E+G+ K G + E+ +VH
Sbjct: 436 AGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVH 495
Query: 702 FF 703
F
Sbjct: 496 KF 497
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 196/391 (50%), Gaps = 40/391 (10%)
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
++Y +NP N+ + + I GF + ++ +++ +G+ P+ +T+ + KAC +
Sbjct: 68 QVFYQIQNP--NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQ 125
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+G+ G I + GF+ V V NSL+T+ +G++ A VF R+ DVVSWT +
Sbjct: 126 KGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSM 185
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ +I+ GD+ AR++FD+MPE+N V+WSVMI+ Y ++ + ++A L+ + N
Sbjct: 186 VAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANE 245
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ V+++ A L AL G H ++L+ + ++ + AL+D+Y++CG VFD
Sbjct: 246 TVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQ 305
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ +D +SW ++I G+ ++G E+A E F M K
Sbjct: 306 LPGRD---ALSWTTLIAGFAMHGYAEKALEYFSRMEK----------------------- 339
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTD 494
+G P + TF++VL A + +E+G +L + +K + + L + D
Sbjct: 340 --------AGLTPREITFTAVLSACSHGGLVERGLELF-ESMKRDYRIEPRLEHYGCMVD 390
Query: 495 TYAKSGDIESSRRVFDRMPDK-NEISWTVMV 524
++G + + + + MP K N W ++
Sbjct: 391 LLGRAGKLAEAEKFVNEMPMKPNAPIWGALL 421
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 47/334 (14%)
Query: 10 SINPETSFNSYIE-----------TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL 58
S +P+ SF+ Y++ T L+K T + + G HG +I+ G + Y+
Sbjct: 91 SKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYV 150
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
L+ MY G+++ A +F + +
Sbjct: 151 QNSLVTMY-------------------------------STLGDIKSASYVFRRISCLDV 179
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
VSWT++++G++K G V + F++ P +N+++W+ I G+ +N F +A++L+ L
Sbjct: 180 VSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSE 239
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV NE S+ +CA + LG I + ++ + +L+ + + G +D A
Sbjct: 240 GVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKA 299
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQS 294
VFD++ RD +SWT ++ F G +A F M + E++++ +++ +
Sbjct: 300 IWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHG 359
Query: 295 GYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
G E LF M R Y +P + ++ L
Sbjct: 360 GLVERGLELFESMKRDYRIEPRLEHYGCMVDLLG 393
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 69/339 (20%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LS L S L +HAH+++ DVF ++ LI
Sbjct: 19 LSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLIS----------------------- 55
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+S N + Y A ++F + N +++ I G+ K D F + +
Sbjct: 56 ---ISINKNLLDY--------AAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQS 104
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA----- 497
+G +P+ T+ ++ A SL+ G HG+II+ GF DV++ +L Y+
Sbjct: 105 KRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDI 164
Query: 498 --------------------------KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
KSGD+ S+R++FD+MP+KN ++W+VM+ G A++
Sbjct: 165 KSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNS 224
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN-IKPNGRH 590
+ ++I L+ ++ + NE ++SV+ +C+H G ++ G + + + + N + N
Sbjct: 225 FFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYI--LRNKMTVNLIL 282
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T +VDM +R G + +A + +P D+ +W +L++G
Sbjct: 283 GTALVDMYARCGSIDKAIWVFDQLPGR-DALSWTTLIAG 320
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 64/248 (25%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+++ +L++ +++ + G++++A +FD +P R+ +SWT LI+GF HG E++
Sbjct: 271 ILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKA 330
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+ YF R + ++G+ P E+TF+++ AC+
Sbjct: 331 LEYFSR-------------------------------MEKAGLTPREITFTAVLSACSHG 359
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
GL +F S+K R+E R + + ++
Sbjct: 360 GLVERGLELFE--------------------SMKRDY---------RIEPR-LEHYGCMV 389
Query: 258 DVFIEMGDLGEARRIFDEMPER-NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
D+ G L EA + +EMP + N W ++ E A R + T KP
Sbjct: 390 DLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGK--TLIELKPEH 447
Query: 317 SCFSIVLS 324
S + ++LS
Sbjct: 448 SGYYVLLS 455
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 38/238 (15%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
S +L K +H +I+ +DVF + L ++ + +VF ++ + N +
Sbjct: 24 SCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNS 83
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF------- 575
+RG + S +S + + + ++ + P+ LT ++ AC+ G +D G++
Sbjct: 84 FIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHG 143
Query: 576 --------NSMEPIY----NIKPNG---RHYTCVVDMLS---------RSGRLSEAEDFI 611
NS+ +Y +IK R +C +D++S +SG ++ A
Sbjct: 144 FDSDVYVQNSLVTMYSTLGDIKSASYVFRRISC-LDVVSWTSMVAGYIKSGDVTSARKLF 202
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLSNIYASA 667
+ MP E + W+ ++SG Y ++A++ + L E H V++S I + A
Sbjct: 203 DKMP-EKNLVTWSVMISG---YAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCA 256
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 219/724 (30%), Positives = 345/724 (47%), Gaps = 108/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD-LNGF 85
+++ T +V +G LHG ++++G ++ Y+ T L+ Y +E +V D L
Sbjct: 43 VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFY-SKNGBIEVARLVFDQLLEK 101
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS------------------------- 120
V +I + G + LF M E N V
Sbjct: 102 TAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 161
Query: 121 --------------WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
LI + K RV+ F++ +N+ISWT I G++QN F +
Sbjct: 162 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 221
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA+KLF ++ G KP+ +S+ +C + G V KA E + V N LI
Sbjct: 222 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLI 281
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
D++ + L +A+++FD M E+N +S++
Sbjct: 282 -------------------------------DMYAKSNLLXDAKKVFDVMAEQNVISYNA 310
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MI Y+ EA LF +M F P+ F +L ASL AL +H ++K G
Sbjct: 311 MIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXG 370
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ D+F +ALID+YSKC KD R HV
Sbjct: 371 VSLDLFAGSALIDVYSKCSYVKDAR------------HV--------------------- 397
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
F+ M +++ V W+A+ GY +H + + +++ + S + PN+ TF++++ A++++AS
Sbjct: 398 -FEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLAS 456
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L G+ H +++K+G + F+ AL D YAK G IE +R++F+ ++ + W M+
Sbjct: 457 LRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIST 516
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
A+ G A+E++ +F EM K I PN +T ++VL ACSH+G V+ GL +FNSM P + IKP
Sbjct: 517 HAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSM-PGFGIKP 575
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
HY CVV +L RSG+L EA++FI MP EP + W SLLS C+ N ++ + A +
Sbjct: 576 GTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMA 635
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
+ Y+LLSNI+AS G W D VR M + K G SW+EV N+V+ F +
Sbjct: 636 ISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIAR 695
Query: 707 -TDH 709
T H
Sbjct: 696 XTTH 699
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 192/398 (48%), Gaps = 66/398 (16%)
Query: 163 GFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
G+S EAL +F+ L +SG PNE +S+ +AC ++ G + G + ++GF++ V V
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
SLI D + + GB+ AR +FD++ E+
Sbjct: 75 GTSLI-------------------------------DFYSKNGBIEVARLVFDQLLEKTA 103
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
V+W+ +IA Y + G + LF QM + P+ S VLSA + L+ L G +HA+
Sbjct: 104 VTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAY 163
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
VL+ G E DV + N LID Y+KC K GR +FD +V V +++SW +MI GY N
Sbjct: 164 VLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV---VKNIISWTTMISGYMQNSFD 220
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EA +LF M N + W P+ +SVL +
Sbjct: 221 WEAMKLFGEM---NRLGWK----------------------------PDGFACTSVLTSC 249
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
S+ +LE+G+ +H IK + F+ L D YAKS + +++VFD M ++N IS+
Sbjct: 250 GSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYN 309
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
M+ G + E++ LF EM P+ LT +S+L
Sbjct: 310 AMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 347
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 201/493 (40%), Gaps = 66/493 (13%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
C +L S + QGR +H + IK + ++ L+ MY S +A ++ +
Sbjct: 241 ACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVM 300
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER-------------------------- 116
+++ +N MI L EA LF M R
Sbjct: 301 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSK 360
Query: 117 -------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ + +ALI + K V+++ FE ++++ W A G+ Q+
Sbjct: 361 QIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHL 420
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ EALKL+ L S KPNE TF+++ A + + R G + K G + V N
Sbjct: 421 ENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN 480
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER---- 279
+L+ + K G ++ AR +F+ RDVV W ++ + G+ EA +F EM +
Sbjct: 481 ALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP 540
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N V++ +++ + +G E+ F M + KP T ++ V+S L RSG
Sbjct: 541 NYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLG-----RSGKLFE 595
Query: 340 AH--VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
A + K+ IE + +L+ G + G+ + + D S+ + +
Sbjct: 596 AKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFAS 655
Query: 398 NGQMEEAKELFDNMPKRNDV-----SW-------SAIISGYLEHKQFDLVFAVFNEMLL- 444
G + K++ D M V SW + I+ H++ D++ +V + ++
Sbjct: 656 KGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQH 715
Query: 445 ---SGEIPNKSTF 454
+G +P+ +
Sbjct: 716 IKGAGYVPDATAL 728
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
SGE PN+ +SV+ A + +EKG LHG +++ GF DV++GT+L D Y+K+GBIE
Sbjct: 31 SGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEV 90
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R VFD++ +K ++WT ++ G + G + S+ LF +M +T++ P+ + SVL ACS
Sbjct: 91 ARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSM 150
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
++ G K ++ + + ++D ++ R+ + M + + +W
Sbjct: 151 LEFLEGG-KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK-NIISWT 208
Query: 625 SLLSG 629
+++SG
Sbjct: 209 TMISG 213
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 525 RGLAESGYAKESINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ + + GY++E++ +F +++ K+ PNE + SV+ AC+ G+V+KG + +
Sbjct: 9 KDMEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQ-LHGFVVRSG 67
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ T ++D S++G + A + + E + W ++++G
Sbjct: 68 FDQDVYVGTSLIDFYSKNGBIEVARLVFDQL-LEKTAVTWTTIIAG 112
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/442 (38%), Positives = 273/442 (61%), Gaps = 10/442 (2%)
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FDEMPE + +S + +I R+ + EEA LF +M + KPN F+ V+ + LK
Sbjct: 55 LFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLKN 114
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
+ G +HA +K+G+ VF+ +A++D Y+K ++ R F+ I + +V VS+ ++
Sbjct: 115 IYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNV---VSYTTL 171
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GY G++++A +LF MP+RN VSW+A++ G+ + + ++F EML G +PN+
Sbjct: 172 IHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQ 231
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
STF + ++A++ASL GK H +K DVF+ +L YAK G +E S VF+
Sbjct: 232 STFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNE 291
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+PD+N +SW ++ G A++G ++++ FE M + PN +T+L +L AC+H+GLV+KG
Sbjct: 292 LPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKG 351
Query: 572 LKYFNSM---EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
YFN M EP +KP HY C+VD+LSR GRL EA F++ +PF+P + W +LL
Sbjct: 352 YMYFNQMRQEEPGI-LKP--EHYACMVDLLSRFGRLKEAAKFLHDLPFDPGTGFWKALLG 408
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
GC + N ++++ A + + L E + YV+LSN Y++AGRW +R+ M EKGL++
Sbjct: 409 GCHIHSNAELSDLAAQKILALDPEDVSSYVMLSNAYSAAGRWQQVSTIRREMKEKGLKRI 468
Query: 689 GGCSWVEVRNQVHFFFQKTDHN 710
GCSW+EVR+++H F +D N
Sbjct: 469 PGCSWIEVRSKIHVFLN-SDKN 489
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 182/379 (48%), Gaps = 69/379 (18%)
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
C +NI+ + LFD MPE + +S T LI F + R EE
Sbjct: 42 CRSKSNIRM----DVDELFDEMPELDVLSVTTLIGRFARQHRYEE--------------- 82
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
A+ LF ++L +KPNE TF+++ + + + LG +
Sbjct: 83 ----------------AMCLFSRMLLLNIKPNEFTFATVIHSSTGLKNIYLGKQLHARTM 126
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K G V V ++++ K+ + AR+ F+ ++K +VVS+T ++ +++ G + +A +
Sbjct: 127 KMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKGKIDDALQ 186
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+F EMPERN VSW+ M+ ++Q G+ EEA LF +M R F PN S F +++ A++ +
Sbjct: 187 LFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMAS 246
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G HA +K DVF+ N+L+ Y+KCG +D LVF+ + +++ VSWN++
Sbjct: 247 LGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRN---TVSWNAV 303
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I G+ NG+ E+A ++F F M +G PN
Sbjct: 304 ICGFAQNGRGEDA-----------------------------VIF--FERMRAAGLRPNS 332
Query: 452 STFSSVLCASASVASLEKG 470
T +LCA +EKG
Sbjct: 333 VTLLGLLCACNHAGLVEKG 351
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 11/287 (3%)
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
+T L +YLG K L A + LN + V + M++ + + EEA+ F+ + + N
Sbjct: 109 STGLKNIYLG--KQLHARTMKMGLNTI-VFVGSAMLDFYAKLCSFEEARNAFEDIQKPNV 165
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
VS+T LI G++K G++++++ F+ P +NV+SW A + GF Q G + EA+ LF+++L
Sbjct: 166 VSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLRE 225
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G PN+ TF + A + +G S K+ V VCNSL++ K G ++ +
Sbjct: 226 GFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDS 285
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQS 294
VF+ + R+ VSW ++ F + G +A F+ M N V+ ++ N +
Sbjct: 286 LLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHA 345
Query: 295 GYPEEAFRLFRQMTRYS---FKP-NTSCFSIVLSALASLKALRSGMH 337
G E+ + F QM + KP + +C +LS LK +H
Sbjct: 346 GLVEKGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKEAAKFLH 392
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 143/340 (42%), Gaps = 72/340 (21%)
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
+ ELFD MP+ + +S + +I + +++ +F+ MLL PN+ TF++V+ +S
Sbjct: 51 DVDELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSST 110
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA------------------------- 497
+ ++ GK LH + +K+G VF+G+A+ D YA
Sbjct: 111 GLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTT 170
Query: 498 ------KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
K G I+ + ++F MP++N +SW MV G ++ G+ +E+++LF EM + PN
Sbjct: 171 LIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPN 230
Query: 552 ELTILSVL---------------FACSHSGLVDKGLKYFNSMEPIY-------------N 583
+ T + AC+ L + NS+ Y N
Sbjct: 231 QSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFN 290
Query: 584 IKP--NGRHYTCVVDMLSRSGRLSEAEDFINSM---PFEPDSNAWASLLSGCKTYKNEQI 638
P N + V+ +++GR +A F M P+S LL C + +
Sbjct: 291 ELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCAC---NHAGL 347
Query: 639 AERAVKNLWKLAEEHPA-----GYVLLSNIYASAGRWIDA 673
E+ ++ +E P Y + ++ + GR +A
Sbjct: 348 VEKGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKEA 387
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/458 (37%), Positives = 277/458 (60%), Gaps = 5/458 (1%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-SFKP 314
+++++ + G + +A +F+++P R+ +SW+ ++ NQ+ P +F M + +P
Sbjct: 44 LINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQP 103
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ F+ ++ A A L A++ G VHA + + D + ++L+D+Y+KCG GR+VF
Sbjct: 104 DHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVF 163
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
DSI K+ +SW +MI GY +G+ +A +LF MP +N +SW+A+ISG ++ +
Sbjct: 164 DSISSKNS---ISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVD 220
Query: 435 VFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F +F EM G +I + SS++ ASA++A L GK +H +I LG+ +F+ AL
Sbjct: 221 SFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALV 280
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK D+ +++++F RM ++ +SWT ++ G A+ G A+E+++L+ M T + PNE+
Sbjct: 281 DMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEV 340
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T + +++ACSH GLV KG +FNSM Y I P+ +HYTC++D+LSRSG L EAE+ I +
Sbjct: 341 TFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKA 400
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MPF+PD WA+LLS C ++N I R +L L E P+ Y+LLSNIYASA W
Sbjct: 401 MPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESV 460
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
VR+LM ++K G S + + + F +P
Sbjct: 461 SKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHP 498
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 197/405 (48%), Gaps = 38/405 (9%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKP 182
LI+ + K G +++++ F + P ++ ISW + + Q L +F + + G++P
Sbjct: 44 LINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQP 103
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ F+ + KACA + + G V + V +SL+ + K G D+ R VF
Sbjct: 104 DHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVF 163
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D + ++ +SWT ++ + + G +A ++F +MP +N +SW+ +I+ QSG ++F
Sbjct: 164 DSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFY 223
Query: 303 LFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF +M + S ++ A A+L L G +H V+ +G E +F+SNAL+D+Y
Sbjct: 224 LFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMY 283
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KC + + +F +V++D +VSW S+I G +G EEA
Sbjct: 284 AKCSDVLAAKKIFGRMVQRD---IVSWTSIIVGTAQHGLAEEA----------------- 323
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-L 480
+++N ML +G PN+ TF ++ A + V + KG+ +IK
Sbjct: 324 --------------LSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDY 369
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMV 524
G + T L D ++SG +E + + MP K +E +W ++
Sbjct: 370 GINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALL 414
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 81/434 (18%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K + A IV ++ D VV + +++ + G + + +FD + +N +SWTA+ISG+ +
Sbjct: 125 KQVHATFIVSPVSDDD-VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQ 183
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSS 189
GR +++ F++ P +N++SWTA I G VQ+G ++ LF+++ G+ + SS
Sbjct: 184 SGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSS 243
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
I A A + LG + L+ G+E + V N+L+ + K +V A+ +F RM +RD
Sbjct: 244 IIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRD 303
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+VSWT I+ +G A Q G EEA L+ +M
Sbjct: 304 IVSWTSII--------VGTA-----------------------QHGLAEEALSLYNRMLS 332
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETK 368
KPN F ++ A + + + G + ++K GI + L+DL S+
Sbjct: 333 TGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSR----- 387
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYL 427
+G +EEA+ L MP K ++ +W+A++S
Sbjct: 388 -----------------------------SGHLEEAENLIKAMPFKPDEATWAALLSACN 418
Query: 428 EHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASAS-----------VASLEKGKDLHG 475
H+ + V + +L L E P+ S + ASA+ +A++E K+
Sbjct: 419 HHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGY 478
Query: 476 KIIKLGFPYDVFLG 489
I LG VFL
Sbjct: 479 SCIVLGKESQVFLA 492
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 35/222 (15%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A A ++ G +H H++K GI++ +SN LI++Y KCG +D
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQD------------- 56
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
A LF+ +P R+ +SW++I++ + L ++F M
Sbjct: 57 ---------------------ALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAM 95
Query: 443 L-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
G P+ F+ ++ A A + ++++GK +H I D + ++L D YAK G
Sbjct: 96 FKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGL 155
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+ R VFD + KN ISWT M+ G A+SG ++I LF++M
Sbjct: 156 PDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKM 197
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 104/229 (45%), Gaps = 6/229 (2%)
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L A A S GK LH IIK G L L + Y K G I+ + +F+++P ++
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 518 ISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
ISW ++ ++ ++++F M ++ + P+ ++ AC+ G + +G K +
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQG-KQVH 128
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
+ + + + + +VDM ++ G +S+ +S +W +++SG Y
Sbjct: 129 ATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSIS-SKNSISWTAMISG---YAQS 184
Query: 637 QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
A++ K+ ++ + L + +G W+D+ + M KG+
Sbjct: 185 GRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGI 233
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 18/188 (9%)
Query: 32 TSQNLVIQG--RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVV 89
S NL + G + +H +I G +++ L+ MY L A +I + D+V
Sbjct: 247 ASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVS 306
Query: 90 HNCMINANIQWGNLEEAQRLFDGM----PERNEVSWTALISGFMKHGRVEESMWYFER-- 143
+I Q G EEA L++ M + NEV++ LI G V + ++F
Sbjct: 307 WTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMI 366
Query: 144 -----NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
NP ++ +T + ++G EA L + KP+E T++++ AC
Sbjct: 367 KDYGINP--SLQHYTCLLDLLSRSGHLEEAENLIKAM---PFKPDEATWAALLSACNHHR 421
Query: 199 DFRLGLSV 206
+ +G+ V
Sbjct: 422 NTLIGIRV 429
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 207/713 (29%), Positives = 352/713 (49%), Gaps = 86/713 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +HG +++ G + + LL MY ++ +E+ + + + + V + +I +Q
Sbjct: 199 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 258
Query: 100 WGNLEEAQRLFDGMPERNE---------------------------------------VS 120
L A + F M + N +
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TA + + K ++++ F+ + N S+ A I G+ Q F+AL LF +L+ SG+
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 378
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+E++ S + +ACA + GL ++GL K+ V V N+ I
Sbjct: 379 GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI-------------- 424
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
D++ + L EA R+FDEM R+ VSW+ +IA + Q+G E
Sbjct: 425 -----------------DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF M R +P+ F +L A +L GM +H+ ++K G+ + + +LID+
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG ++ + ++ ++G MEE +++ + + VSW+
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRA--------------NVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+IISGY+ +Q + +F M+ G P+K T+++VL A++AS GK +H ++IK
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 632
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
DV++ + L D Y+K GD+ SR +F++ ++ ++W M+ G A G +E+I LF
Sbjct: 633 ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLF 692
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
E M +I PN +T +S+L AC+H GL+DKGL+YF M+ Y + P HY+ +VD+L +
Sbjct: 693 ERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGK 752
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE-QIAERAVKNLWKLAEEHPAGYVL 659
SG++ A + I MPFE D W +LL C ++N ++AE A L +L + + Y L
Sbjct: 753 SGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTL 812
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
LSN+YA AG W ++R+ M L+K GCSWVE+++++H F +P+
Sbjct: 813 LSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPR 865
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/582 (25%), Positives = 268/582 (46%), Gaps = 98/582 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+ K+ Q + G+ H H+I +G ++ LL +Y SR D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSR---------------D 98
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V A +FD MP R+ VSW +I+G+ K + ++ +F P
Sbjct: 99 FV----------------SASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW + + G++QNG S +++++F+ + G++ + TF+ I K C+ + D LG+ +
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G++ + G C++ DVV+ + +LD++ +
Sbjct: 203 HGIVVRVG-------CDT------------------------DVVAASALLDMYAKGKRF 231
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
E+ R+F +PE+N VSWS +IA Q+ A + F++M + + + S ++ VL +
Sbjct: 232 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A+L LR G +HAH LK D + A +D+Y+KC +D +++F
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF------------ 339
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
DN N S++A+I+GY + + +F+ ++ SG
Sbjct: 340 ----------------------DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
++ + S V A A V L +G ++G IK DV + A D Y K + +
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
RVFD M ++ +SW ++ ++G E++ LF M ++ I P+E T S+L AC+ G
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GG 496
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+ G++ +S+ + N ++DM S+ G + EAE
Sbjct: 497 SLGYGMEIHSSIVK-SGMASNSSVGCSLIDMYSKCGMIEEAE 537
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 219/469 (46%), Gaps = 47/469 (10%)
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
SF FL + S N FS + K CA+ LG + +GF V N
Sbjct: 32 SFSYFTDFLNQVNSVSTTN---FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNC 88
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ + + A VFD+M RDVVSW +++ + + D+ +A F+ MP R+ VSW
Sbjct: 89 LLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSW 148
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ M++ Y Q+G ++ +F M R + + F+I+L + L+ GM +H V++
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+G + DV ++AL+D+Y+K + VF I EK+ VSW+++I G N + A
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN---SVSWSAIIAGCVQNNLLSLA 265
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+ F M K N A +S +S ++SVL + A++
Sbjct: 266 LKFFKEMQKVN-----AGVS--------------------------QSIYASVLRSCAAL 294
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+ L G LH +K F D + TA D YAK +++ ++ +FD + N S+ M+
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G ++ + +++ LF + + + +E+++ V AC+ + +GL+ + I
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG-----LAI 409
Query: 585 KPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
K + CV +DM + L+EA + M D+ +W ++++
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F+ F + L + + FS V A +LE GK H +I GF F+ L
Sbjct: 33 FSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQV 92
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES------------------------- 530
Y S D S+ VFD+MP ++ +SW M+ G ++S
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 531 -GYAK-----ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
GY + +SI +F +M + I + T +L CS G++ + +
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-GC 211
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + ++DM ++ R E+ +P E +S +W+++++GC +A + K
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ K+ AG + +IYAS R A++ +L
Sbjct: 271 EMQKV----NAG--VSQSIYASVLRSCAALSELRL 299
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 215/681 (31%), Positives = 332/681 (48%), Gaps = 94/681 (13%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+++ N I + G LEEA+ LFD MP R SW +ISG+ GR
Sbjct: 40 NVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYP---------- 89
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
EAL L + S V NEV+FS++ ACA F LG
Sbjct: 90 ---------------------EALTLVSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQ 128
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V L+ K+G+E+ V ++L+ + + A VF+ + + V W+++L +++
Sbjct: 129 VHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDM 188
Query: 266 LGEARRIFDEMPERNEVSWSVMIARY-NQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVL 323
+ +A +F++MP R+ V+W+ +I+ Y + E A LF M R S PN V+
Sbjct: 189 MDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVV 248
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A L LR+G VH +K G++ D I A+ + Y C D + V++S+ +
Sbjct: 249 RVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASL 308
Query: 384 HV-----------------------------VSWNSMIGGYGLNGQMEEAKELFDNMP-- 412
+V VS+N MI GY ++GQ E++K LF+ M
Sbjct: 309 NVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPE 368
Query: 413 ------------------------------KRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+RN VSW++++SGY+ + ++ ++ M
Sbjct: 369 NLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAM 428
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
++STFS + A + + S +G+ LH +IK F +V++GTAL D Y+K G +
Sbjct: 429 RRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHL 488
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
++R F + N +WT ++ G A G E+I LF M I PN T + VL AC
Sbjct: 489 AEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSAC 548
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+H+GLV +GL+ F+SM+ Y + P HYTCVVD+L RSG L EAE+FI MP E D
Sbjct: 549 NHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGII 608
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LL+ +K+ ++ ERA + L+ L +V+LSN+YA GRW +RK +
Sbjct: 609 WGALLNASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQS 668
Query: 683 KGLRKSGGCSWVEVRNQVHFF 703
LRK GCSW+E+ N++H F
Sbjct: 669 LELRKDPGCSWIELNNKIHLF 689
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 245/587 (41%), Gaps = 141/587 (24%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
RS ++N E SF++ + C + G+ +H L+K+G ER+ ++
Sbjct: 100 RSCVALN-EVSFSAVLSAC-------ARSGSFLLGKQVHSLLLKSGY--ERFGLVGSALL 149
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y VH C I EA+ +F+ + + N+V W+ ++
Sbjct: 150 YF--------------------CVHCCGI---------REAEVVFEELRDGNQVLWSLML 180
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE-ALKLFLKLLESG-VKPN 183
+G++K ++++M FE+ P ++V++WT I G+ + E AL LF + S V PN
Sbjct: 181 AGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPN 240
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGF---------------------------- 215
E T + + CA + R G V GL K G
Sbjct: 241 EFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYE 300
Query: 216 ----EKHVSVCNSLITLSLKMGEVDLA-------------------------------RS 240
+ ++V NSLI + G ++ A +
Sbjct: 301 SMGGQASLNVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKR 360
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEE 299
+F++M ++ S ++ V+ + G+L EA ++FD+ ERN VSW+ M++ Y +G +E
Sbjct: 361 LFEKMSPENLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKE 420
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A L+ M R S + S FS++ A + L + R G +HAH++K + +V++ AL+D
Sbjct: 421 ALNLYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVD 480
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
YSKCG + + F SI +VA +W ++I GY +G EA
Sbjct: 481 FYSKCGHLAEAQRSFISIFSPNVA---AWTALINGYAYHGLGSEA--------------- 522
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKII 478
+F ML G +PN +TF VL A + +G + H
Sbjct: 523 ----------------ILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQR 566
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
G + T + D +SG ++ + +MP + + I W ++
Sbjct: 567 CYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALL 613
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 45/374 (12%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG- 84
C+++ ++ G+ +HG IK G+ + + + Y G +A + + + G
Sbjct: 246 CVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQ 305
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
L V N +I + G +EEA+ +F + E N VS+ +I G+ G+ E+S FE+
Sbjct: 306 ASLNVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKM 365
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKL-----------LESG-------------- 179
+N+ S I + +NG EA+KLF K + SG
Sbjct: 366 SPENLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLY 425
Query: 180 -------VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
V + TFS + +AC+ + FR G + + K F+ +V V +L+ K
Sbjct: 426 VAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKC 485
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMI 288
G + A+ F + +V +WT +++ + G EA +F M + N ++ ++
Sbjct: 486 GHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVL 545
Query: 289 ARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKI 345
+ N +G E R+F M R Y P ++ V+ L RSG A ++K+
Sbjct: 546 SACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLG-----RSGHLKEAEEFIIKM 600
Query: 346 GIEKDVFISNALID 359
IE D I AL++
Sbjct: 601 PIEADGIIWGALLN 614
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 152/345 (44%), Gaps = 47/345 (13%)
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
E V +V+S N I G++EEA+ LFD MP R SW+ +ISGY ++ +
Sbjct: 35 EPHVGNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTL 94
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ M S N+ +FS+VL A A S GK +H ++K G+ +G+AL
Sbjct: 95 VSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVH 154
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAE--------------------------SGY 532
I + VF+ + D N++ W++M+ G + SGY
Sbjct: 155 CCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGY 214
Query: 533 AK------ESINLFEEMEKTS-ITPNELTILSVLFACS-----HSGLVDKGLKYFNSMEP 580
AK +++LF M ++S + PNE T+ V+ C+ +G V GL ++
Sbjct: 215 AKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDF 274
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+I + C + + + R+ E SM + N SL+ G + + AE
Sbjct: 275 DNSIGGAVTEFYCGCEAIDDAKRVYE------SMGGQASLNVANSLIGGLVSKGRIEEAE 328
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
++L E +P Y L+ YA +G++ + + + M+ + L
Sbjct: 329 LV---FYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPENL 370
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 13/292 (4%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F ++ C + + G L A L + N TAL+ + K G + E+ F
Sbjct: 440 FSVLFRACSCLCSFRQGQLLHAH-LIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISI 498
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
NV +WTA I G+ +G EA+ LF +L G+ PN TF + AC GL
Sbjct: 499 FSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGL 558
Query: 205 SVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDV--F 260
+F + + G + ++ L + G + A +M + D + W +L+ F
Sbjct: 559 RIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLNASWF 618
Query: 261 IEMGDLGE--ARRIFDEMPERNEV-SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ ++GE A ++F P N + ++ V+ Y G + +L +++ + +
Sbjct: 619 WKDMEVGERAAEKLFSLDP--NPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELRKDPG 676
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID---LYSKCGE 366
C I L+ L ++ H+++ V+ +E N++I LYS GE
Sbjct: 677 CSWIELNNKIHLFSVEDKTHLYSDVIYATVEHITATINSIIPSNYLYSSHGE 728
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 207/713 (29%), Positives = 352/713 (49%), Gaps = 86/713 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +HG +++ G + + LL MY ++ +E+ + + + + V + +I +Q
Sbjct: 157 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 216
Query: 100 WGNLEEAQRLFDGMPERNE---------------------------------------VS 120
L A + F M + N +
Sbjct: 217 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 276
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TA + + K ++++ F+ + N S+ A I G+ Q F+AL LF +L+ SG+
Sbjct: 277 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 336
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+E++ S + +ACA + GL ++GL K+ V V N+ I
Sbjct: 337 GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI-------------- 382
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
D++ + L EA R+FDEM R+ VSW+ +IA + Q+G E
Sbjct: 383 -----------------DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 425
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF M R +P+ F +L A +L GM +H+ ++K G+ + + +LID+
Sbjct: 426 LFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 484
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG ++ + ++ ++G MEE +++ + + VSW+
Sbjct: 485 YSKCGMIEEAEKIHSRFFQR--------------ANVSGTMEELEKMHNKRLQEMCVSWN 530
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+IISGY+ +Q + +F M+ G P+K T+++VL A++AS GK +H ++IK
Sbjct: 531 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 590
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
DV++ + L D Y+K GD+ SR +F++ ++ ++W M+ G A G +E+I LF
Sbjct: 591 ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLF 650
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
E M +I PN +T +S+L AC+H GL+DKGL+YF M+ Y + P HY+ +VD+L +
Sbjct: 651 ERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGK 710
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE-QIAERAVKNLWKLAEEHPAGYVL 659
SG++ A + I MPFE D W +LL C ++N ++AE A L +L + + Y L
Sbjct: 711 SGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTL 770
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
LSN+YA AG W ++R+ M L+K GCSWVE+++++H F +P+
Sbjct: 771 LSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPR 823
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 251/520 (48%), Gaps = 67/520 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC++ + A +FD MP R+ VSW +I+G+ K + ++ +F P ++
Sbjct: 43 VLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRD 102
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW + + G++QNG S +++++F+ + G++ + TF+ I K C+ + D LG+ + G
Sbjct: 103 VVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG 162
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
++ + G C++ DVV+ + +LD++ + E
Sbjct: 163 IVVRVG-------CDT------------------------DVVAASALLDMYAKGKRFVE 191
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
+ R+F +PE+N VSWS +IA Q+ A + F++M + + + S ++ VL + A+
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L LR G +HAH LK D + A +D+Y+KC +D +++F
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF-------------- 297
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
DN N S++A+I+GY + + +F+ ++ SG
Sbjct: 298 --------------------DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 337
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
++ + S V A A V L +G ++G IK DV + A D Y K + + RV
Sbjct: 338 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 397
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M ++ +SW ++ ++G E++ LF M ++ I P+E T S+L AC+ G +
Sbjct: 398 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSL 456
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
G++ +S+ + N ++DM S+ G + EAE
Sbjct: 457 GYGMEIHSSIVK-SGMASNSSVGCSLIDMYSKCGMIEEAE 495
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 208/440 (47%), Gaps = 44/440 (10%)
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CA+ LG + +GF V N L+ + + A VFD+M RDVVSW
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+++ + + D+ +A F+ MP R+ VSW+ M++ Y Q+G ++ +F M R +
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
+ F+I+L + L+ GM +H V+++G + DV ++AL+D+Y+K + V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F I EK+ VSW+++I G N + A + F M K N A +S
Sbjct: 196 FQGIPEKN---SVSWSAIIAGCVQNNLLSLALKFFKEMQKVN-----AGVS--------- 238
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+S ++SVL + A+++ L G LH +K F D + TA
Sbjct: 239 -----------------QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 281
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK +++ ++ +FD + N S+ M+ G ++ + +++ LF + + + +E+
Sbjct: 282 DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 341
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEAED 609
++ V AC+ + +GL+ + IK + CV +DM + L+EA
Sbjct: 342 SLSGVFRACALVKGLSEGLQIYG-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFR 396
Query: 610 FINSMPFEPDSNAWASLLSG 629
+ M D+ +W ++++
Sbjct: 397 VFDEMR-RRDAVSWNAIIAA 415
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 41/255 (16%)
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
SV CA +LE GK H +I GF F+ L Y S D S+ VFD+MP +
Sbjct: 13 SVECAKQ--GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR 70
Query: 516 NEISWTVMVRGLAES--------------------------GYAK-----ESINLFEEME 544
+ +SW M+ G ++S GY + +SI +F +M
Sbjct: 71 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ I + T +L CS G++ + + + + ++DM ++ R
Sbjct: 131 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-GCDTDVVAASALLDMYAKGKRF 189
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
E+ +P E +S +W+++++GC +A + K + K+ AG + +IY
Sbjct: 190 VESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV----NAG--VSQSIY 242
Query: 665 ASAGRWIDAMNVRKL 679
AS R A++ +L
Sbjct: 243 ASVLRSCAALSELRL 257
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/440 (39%), Positives = 265/440 (60%), Gaps = 5/440 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLS 324
L + R +FDE P R+ +S ++A + S PE L R+M + + +P+ + + S
Sbjct: 54 LPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRPDHFVLASIAS 113
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A L++L G +H H + D + ++LID+Y KCG D R VFDSIV K+
Sbjct: 114 ATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNS-- 171
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
V W ++I GY LNG+ +EA ELF +MP R +W+A+ISG++ + +F +M
Sbjct: 172 -VMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRR 230
Query: 445 SG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G I + SS + +A +A+ G+ LH ++LGF + +G A+ D Y+K DI
Sbjct: 231 DGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIH 290
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
S+R VF+ + ++ ISWT M+ G A+ G A+E+ +L++ M + PNE+T + +++ACS
Sbjct: 291 SAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACS 350
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV KG + F+SM+ Y I P +HYTC +D+LSRSG L+EAE+ I +MP+ PD W
Sbjct: 351 HAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATW 410
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
ASLLS CK Y N +++ R NL +L ++P+ YVLLSN+YA G+W VRKLM +
Sbjct: 411 ASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADM 470
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
+RK G SW+EV + F
Sbjct: 471 EIRKEPGYSWIEVGREFRLF 490
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 201/443 (45%), Gaps = 39/443 (8%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKP 182
L+S + K + ++ F+ P +++ +++ + + L L ++L + ++P
Sbjct: 44 LVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRP 103
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +SI A A + LG + G + + V +SLI + K G D AR VF
Sbjct: 104 DHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVF 163
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D + ++ V WT ++ ++ G EA +F MP R +W+ +I+ + +SG A +
Sbjct: 164 DSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVK 223
Query: 303 LFRQMTRYSFKPNTS-CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF M R + + S + A L A G +H+ +++G + + NA++D+Y
Sbjct: 224 LFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMY 283
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKC + R VF+ I +D ++SW +M+ G +G+ EEA
Sbjct: 284 SKCSDIHSAREVFEEITGRD---IISWTTMLVGEAQHGRAEEA----------------- 323
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KL 480
F++++ M+L+G PN+ TF ++ A + ++KG+ L + +
Sbjct: 324 --------------FSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEY 369
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINL 539
G + T D ++SG + + + MP +E +W ++ + A+ SI +
Sbjct: 370 GINPRLQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRV 429
Query: 540 FEE-MEKTSITPNELTILSVLFA 561
+ +E P+ +LS ++A
Sbjct: 430 ADNLLELRPKYPSTYVLLSNVYA 452
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 194/403 (48%), Gaps = 33/403 (8%)
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
T RL + LG K L + + + D VV + +I+ + G ++A+++FD + +N
Sbjct: 115 TARLRSLCLG--KQLHGHFVASPYSSDD-VVKSSLIDMYCKCGVPDDARKVFDSIVAKNS 171
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V WTALISG++ +GR +E++ F P + + +WTA I GFV++G S A+KLF+ +
Sbjct: 172 VMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRD 231
Query: 179 GVKPNEV-TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
GV ++ SS A++ LG + L + GF + V N+++ + K ++
Sbjct: 232 GVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHS 291
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQ 293
AR VF+ + RD++SWT +L + G EA ++D M + NEV++ +I +
Sbjct: 292 AREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSH 351
Query: 294 SGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+G ++ +LF M Y P ++ L L+ RSG A L I V
Sbjct: 352 AGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLS-----RSGHLAEAEEL-ITTMPYVP 405
Query: 353 ISNALIDLYSKCGETKDGRL---VFDSIVEKDVAHVVSWNSMIGGYGLNGQ---MEEAKE 406
L S C + + + V D+++E + ++ + Y +NG+ ++ ++
Sbjct: 406 DEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRK 465
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
L +M R + +S I G ++F L A GE+P
Sbjct: 466 LMADMEIRKEPGYSWIEVG----REFRLFHA--------GEVP 496
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 121/293 (41%), Gaps = 36/293 (12%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ GR LH ++ G + ++ MY A E+ +++ G D++ M+
Sbjct: 255 VLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGE 314
Query: 98 IQWGNLEEAQRLFDGM----PERNEVSWTALISGFMKHGRVEESMWYFER-------NPF 146
Q G EEA L+D M + NEV++ LI G V++ F+ NP
Sbjct: 315 AQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINP- 373
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ +T + ++G EA +L + P+E T++S+ AC + N+ + + V
Sbjct: 374 -RLQHYTCYLDLLSRSGHLAEAEELITTM---PYVPDEATWASLLSACKKYNNAEMSIRV 429
Query: 207 FG--LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
L + + + +++ ++ K VD R + ME R ++ I
Sbjct: 430 ADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWI-------- 481
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
++G R+F EV + R G+ EE L +M + + P+TS
Sbjct: 482 EVGREFRLF----HAGEVPIDL---REEILGFLEE---LVSEMRQRGYVPDTS 524
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 295/590 (50%), Gaps = 66/590 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A ++ +MK VE +F+ +N+ S + GF + ++ ++LL G +P
Sbjct: 130 AFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEP 189
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N TF SI K CA D G ++ G + K+G
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSGINP------------------------- 224
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D W +++V+ + G A ++F E+PER+ VSW+ +I + GY R
Sbjct: 225 ------DSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLR 277
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F QM F PN F +L + +SL + G VHA ++K ++ + F+ AL+D+Y+
Sbjct: 278 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 337
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
K N +E+A+ +F+ + KR+ +W+ I
Sbjct: 338 K----------------------------------NRFLEDAETIFNRLIKRDLFAWTVI 363
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
++GY + Q + F +M G PN+ T +S L + +A+L+ G+ LH IK G
Sbjct: 364 VAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ 423
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+F+ +AL D YAK G +E + VFD + ++ +SW ++ G ++ G +++ FE
Sbjct: 424 SGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEA 483
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M P+E+T + VL ACSH GL+++G K+FNS+ IY I P HY C+VD+L R+G
Sbjct: 484 MLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAG 543
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
+ E E FI M + W ++L CK + N + ERA L++L E + Y+LLSN
Sbjct: 544 KFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSN 603
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++A+ G W D NVR LM+ +G++K GCSWVEV QVH F +PK
Sbjct: 604 MFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPK 653
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 235/568 (41%), Gaps = 166/568 (29%)
Query: 17 FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEAN 76
F + T + +LK S+ + +G+A+HG +IK+GI+ + +L
Sbjct: 187 FEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLW----------------- 229
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
N ++N + G+ A ++F +PER+ VSWTALI+GF+ G
Sbjct: 230 --------------NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGY--- 272
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
L++F ++L G PN TF SI ++C+
Sbjct: 273 -----------------------------GSGLRIFNQMLAEGFNPNMYTFISILRSCSS 303
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
++D LG V I K + + V +L+ + K ++ A ++F+R+ KRD+ +WTVI
Sbjct: 304 LSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVI 363
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+A Y Q G E+A + F QM R KPN
Sbjct: 364 -------------------------------VAGYAQDGQGEKAVKCFIQMQREGVKPNE 392
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ LS + + L SG +H+ +K G D+F+++AL+D+Y+KCG +D +VFD
Sbjct: 393 FTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDG 452
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+V +D VSWN++I GY +GQ +A
Sbjct: 453 LVSRD---TVSWNTIICGYSQHGQGGKA-------------------------------L 478
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
F ML G +P++ TF VL A + + +E+GK +L+ Y
Sbjct: 479 KAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHF---------------NSLSKIY 523
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
+ IE + MV L +G E + EEM+ TS N L
Sbjct: 524 GITPTIE---------------HYACMVDILGRAGKFHEVESFIEEMKLTS---NVLIWE 565
Query: 557 SVLFACSHSGLVDKG----LKYFNSMEP 580
+VL AC G ++ G +K F +EP
Sbjct: 566 TVLGACKMHGNIEFGERAAMKLF-ELEP 592
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 209/435 (48%), Gaps = 51/435 (11%)
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP-EEAFRLFRQMTRYS 311
W+ +++V+++ L AR++ +EMP ++ W+ ++ N S YP +EA +LF M
Sbjct: 27 WSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSAN-SPYPLQEAVQLFYLMRHTR 85
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ N F+ ++SA ASL G +HA V K G E D+ ISNA + +Y K ++G
Sbjct: 86 IRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGW 145
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
F ++ + +N+ RN+ ++SG+ + +
Sbjct: 146 QFFKAM-----------------------------MIENLASRNN-----LLSGFCDTET 171
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
D + ++L+ G PN TF S+L AS L +GK +HG++IK G D L +
Sbjct: 172 CDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS 231
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L + YAK G + +VF +P+++ +SWT ++ G GY + +F +M PN
Sbjct: 232 LVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPN 290
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
T +S+L +CS VD G K ++ ++ N T +VDM +++ L +AE
Sbjct: 291 MYTFISILRSCSSLSDVDLG-KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIF 349
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLSNIYA---- 665
N + + D AW +++G Y + E+AVK ++ E P + L S++
Sbjct: 350 NRL-IKRDLFAWTVIVAG---YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRI 405
Query: 666 ---SAGRWIDAMNVR 677
+GR + +M ++
Sbjct: 406 ATLDSGRQLHSMAIK 420
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
++IK G D L ++L + Y K ++ +R+V + MP ++ W + +E
Sbjct: 14 RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQE 73
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSG 566
++ LF M T I N+ S++ A + G
Sbjct: 74 AVQLFYLMRHTRIRLNQFIFASLISAAASLG 104
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/599 (31%), Positives = 324/599 (54%), Gaps = 66/599 (11%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E N + +L+ + K + + F+ ++ +++ + + G+ G + EA++LFL+
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L SG+KP++ TF+++ A ++D + G V G + K F +V V N+L+ K +
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQ 291
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
VD E ++F EMPE + +S++V+I Y +
Sbjct: 292 VD-------------------------------EVGKLFYEMPELDGISYNVVITSYAWN 320
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G +E+F LFR++ F F+ +LS S LR G +H + +G + +
Sbjct: 321 GQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE 380
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NAL+D+Y+KC NG +EA+++FDN+ +
Sbjct: 381 NALVDMYAKC---------------------------------NGD-KEAQKIFDNIACK 406
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ V W+A+IS Y++ + + VF++M +G +++TF+S+L A A++AS+ G+ LH
Sbjct: 407 STVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLH 466
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
+I+ GF +V+ G+AL DTYAK G + + + F MP++N +SW ++ A++G
Sbjct: 467 SLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVD 526
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
++N F++M ++ P+ ++ LSVL ACSH G V++ L +FNSM IY + P HYT +
Sbjct: 527 GTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSM 586
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EH 653
VD+L R+GR EAE + MPFEP W+S+L+ C+ +KN ++A++A L+ + +
Sbjct: 587 VDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRD 646
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A Y+ +SNIYA AG+W + V+K M ++G+RK SWVE+++Q H F +P+
Sbjct: 647 AAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPE 705
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 128/241 (53%), Gaps = 3/241 (1%)
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ ++ A +L S + AH++K G + SN ++ + + G+ VFD + K
Sbjct: 13 VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ +S N MI G+ G++ +A+ELFD M +R VSW+ +I GYL+ Q F ++
Sbjct: 73 N---TISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYA 129
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+M G P+ T ++L + + +H +IKLG+ Y++ + +L D Y K+
Sbjct: 130 DMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTH 189
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+ + ++F M +K+ +++ ++ G + G +E+I LF E+ + I P++ T ++L
Sbjct: 190 CLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLS 249
Query: 561 A 561
A
Sbjct: 250 A 250
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 142/331 (42%), Gaps = 44/331 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG ++KT ++ LL Y + E ++ ++ D + +N +I +
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW 319
Query: 100 WGNLEEAQRLFDGMP----ERNEVSWTALIS---------------------GFMKHGRV 134
G +E+ LF + +R + + L+S G RV
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379
Query: 135 E--------------ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
E E+ F+ ++ + WTA I +VQ G E + +F + +GV
Sbjct: 380 ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGV 439
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
++ TF+SI +ACA + LG + L+ ++GF +V ++L+ K G + A
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGY 296
F M +R+ VSW ++ + + G++ F +M + + VS+ +++ + G+
Sbjct: 500 SFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGF 559
Query: 297 PEEAFRLFRQMTR-YSFKPNTSCFSIVLSAL 326
EEA F MT+ Y P ++ ++ L
Sbjct: 560 VEEALWHFNSMTQIYEVTPKREHYTSMVDVL 590
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 117/302 (38%), Gaps = 70/302 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL TS + GR +H I G + E + L+ MY EA +I ++
Sbjct: 348 LLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKS 407
Query: 87 LVVHNCMINANIQWGNLEEAQRLFD-----GMPE-------------------------- 115
V MI+A +Q G EE +F G+P
Sbjct: 408 TVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHS 467
Query: 116 --------RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
N S +AL+ + K G + +++ F P +N +SW A I + QNG
Sbjct: 468 LLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDG 527
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
L F ++++SG KP+ V+F S+ AC+ L F NS+
Sbjct: 528 TLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHF---------------NSMT- 571
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSV 286
+++ KR+ +T ++DV G EA ++ EMP E +E+ WS
Sbjct: 572 ------------QIYEVTPKRE--HYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617
Query: 287 MI 288
++
Sbjct: 618 VL 619
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 207/664 (31%), Positives = 317/664 (47%), Gaps = 108/664 (16%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL--ESGV 180
ALI+ + K G VEE++ FE P +N++SW + ICGF +NGF E+ F ++L E
Sbjct: 141 ALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESF 200
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFK---------------------------- 212
P+ T ++ CA D G++V GL K
Sbjct: 201 VPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQL 260
Query: 213 -----------------AGFEKHVSVCNSLITLS----------------LKMGEVDLAR 239
G+ + VC + L L + V L R
Sbjct: 261 LFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLER 320
Query: 240 SVFDRMEKRDVVSW-------TVILDVFI----EMGDLGEARRIFDEMPERNEVSWSVMI 288
S +++ SW ++ + FI G L + R+FD M + SW+ ++
Sbjct: 321 SELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALL 380
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
Y Q+ P +A L+ QMT P+ +L A + +K+L G +H L+ G+
Sbjct: 381 CGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLA 440
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D FI +L+ LY CG+ A+ LF
Sbjct: 441 VDPFIGISLLSLYICCGKPF----------------------------------AAQVLF 466
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
D M R+ VSW+ +I+GY ++ D +F +ML G P + V A + +++L
Sbjct: 467 DGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR 526
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
GK+LH +K D+F+ +++ D YAK G I S+R+FDR+ +K+ SW V++ G
Sbjct: 527 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG 586
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G KE++ LFE+M + + P++ T +L ACSH+GLV+ GL+YFN M ++NI+P
Sbjct: 587 IHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL 646
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HYTCVVDML R+GR+ +A I MP +PDS W+SLLS C+ + N + E+ L +
Sbjct: 647 EHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLE 706
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
L E P YVL+SN++A +G+W D VR M + GL+K GCSW+EV +VH F +
Sbjct: 707 LEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDE 766
Query: 709 HNPK 712
P+
Sbjct: 767 MLPE 770
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 181/386 (46%), Gaps = 41/386 (10%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D V T I+ ++ G ++R +FD++ +N W+ +++ Y ++ E+A +F ++
Sbjct: 33 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 92
Query: 309 RYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
+ KP+ V+ A A L L G +H K+ + DVF+ NALI +Y KCG
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLV 152
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
++ VF+ + E++ +VSWNS+I G+ NG ++E+
Sbjct: 153 EEAVKVFEHMPERN---LVSWNSIICGFSENGFLQES----------------------- 186
Query: 428 EHKQFDLVFAVFNEMLLSGE--IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
F F EML+ E +P+ +T +VL A +EKG +HG +KLG +
Sbjct: 187 --------FNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-- 543
+ + +L D Y+K + ++ +FD+ KN +SW M+ G A + L ++M
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQT 298
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
E + +E TIL+VL C + + LK + + ++ N + +R G
Sbjct: 299 EDAKMKADEFTILNVLPVCLERSEL-QSLKELHGYSWRHGLQSNELVANAFIAAYTRCGA 357
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSG 629
L +E + M + S +W +LL G
Sbjct: 358 LCSSERVFDLMDTKTVS-SWNALLCG 382
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 152/301 (50%), Gaps = 13/301 (4%)
Query: 360 LYSKCGETKD---GRLVFD--SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
L CG+ KD GR + + S + V +I Y + G +++ +FD + ++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLEKGKDL 473
N W+AI+S Y ++ F+ ++F+E++ ++ P+ T V+ A A + L G+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
HG K+ DVF+G AL Y K G +E + +VF+ MP++N +SW ++ G +E+G+
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 534 KESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ES N F EM + S P+ T+++VL C+ ++KG+ + + +
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA-VHGLAVKLGLNEELMVN 242
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
++DM S+ LSEA+ + + + +W S++ G Y E+ R L K+
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSMIGG---YAREEDVCRTFYLLQKMQT 298
Query: 652 E 652
E
Sbjct: 299 E 299
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 264/444 (59%), Gaps = 3/444 (0%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A RIF ++ N ++ MI ++ S P++AF + Q R P+ F ++ +
Sbjct: 72 ASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTK 131
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L + G H H++K G EKDV++ N+L+ +Y+ G+T+ L+F + DV VSW
Sbjct: 132 LHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDV---VSW 188
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
SMI G+ G +E A++LFD MP++N V+WS +ISGY ++ FD +F + G
Sbjct: 189 TSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVR 248
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
N++ SV+ + A + +LE G+ H ++K G ++ LGTAL D YA+ G I+ + V
Sbjct: 249 ANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWV 308
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+ +P+++ +SWT ++ GLA GY++ S+ F M + +TP ++T +VL ACSH GLV
Sbjct: 309 FEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLV 368
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G + F SM+ + ++P HY C+VD+L R+G+L EAE F+ MP +P++ W +LL
Sbjct: 369 ERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLG 428
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ +KN +I ER K L +L +H YVLLSNIYA+A W +R++M KGL+K
Sbjct: 429 ACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKP 488
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
G S +E+ +VH F +P+
Sbjct: 489 PGHSLIELDGRVHKFTIGDSSHPE 512
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 165/304 (54%), Gaps = 9/304 (2%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+NP N+ + A I G + +A +++ G+ P+ +TF + K+C +++ +
Sbjct: 80 QNP--NLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISM 137
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G G I K GFEK V V NSL+ + G+ + A +F RM DVVSWT ++ F +
Sbjct: 138 GSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNK 197
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GD+ AR++FD+MPE+N V+WS MI+ Y Q+ + ++A LF+ + + N + V
Sbjct: 198 CGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSV 257
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+S+ A L AL G H +V+K G+ ++ + AL+D+Y++CG VF+ + E+D
Sbjct: 258 ISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERD- 316
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN----DVSWSAIISGYLEHKQFDLVFAV 438
+SW ++I G ++G E + + F M + D++++A++S + F +
Sbjct: 317 --TLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQI 374
Query: 439 FNEM 442
F M
Sbjct: 375 FESM 378
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 162/365 (44%), Gaps = 50/365 (13%)
Query: 10 SINPETSFNSYIE-----------TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL 58
S NP+ +F+ Y++ T L+K T + + G HGH+IK G K+ Y+
Sbjct: 97 SKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYV 156
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
L+ MY +G+ E A +F M +
Sbjct: 157 QNSLVHMY-------------------------------ATFGDTEAATLIFQRMYYVDV 185
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
VSWT++I GF K G VE + F++ P +N+++W+ I G+ QN +A++LF L
Sbjct: 186 VSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQ 245
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV+ NE S+ +CA + LG + K G ++ + +L+ + + G +D A
Sbjct: 246 GVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKA 305
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQS 294
VF+ + +RD +SWT ++ G + + F M E +++++ +++ +
Sbjct: 306 VWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHG 365
Query: 295 GYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G E F++F M R + +P + ++ L L VLK+ ++ + +
Sbjct: 366 GLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERF---VLKMPVKPNAPV 422
Query: 354 SNALI 358
AL+
Sbjct: 423 WGALL 427
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 151/350 (43%), Gaps = 76/350 (21%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA++++ I DVF ++ LI C + G + D
Sbjct: 36 IHAYMIRTHIICDVFAASRLIAF---CVDPSSGTSLIDY--------------------- 71
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
A +F + N ++A+I G+ K D F + + G +P+ TF +
Sbjct: 72 ------ASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFL 125
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
+ + + + G HG IIK GF DV++ +L YA GD E++ +F RM +
Sbjct: 126 VKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDV 185
Query: 518 ISWTVMVRGLAE--------------------------SGYAK-----ESINLFEEMEKT 546
+SWT M+RG + SGYA+ +++ LF+ ++
Sbjct: 186 VSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQ 245
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-----TCVVDMLSRS 601
+ NE ++SV+ +C+H G ++ G + + Y +K NG T +VDM +R
Sbjct: 246 GVRANETVMVSVISSCAHLGALELGERAHD-----YVVK-NGMTLNLILGTALVDMYARC 299
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
G + +A +P E D+ +W +L++G + +ER++K + E
Sbjct: 300 GSIDKAVWVFEDLP-ERDTLSWTALIAGLAMHG---YSERSLKYFATMVE 345
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 313/627 (49%), Gaps = 66/627 (10%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V C+ ++++ L A R+FDG P R+ +WT++ISG + GR + M
Sbjct: 60 VRGCVPSSSVIARGLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGM---------- 109
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLE--SGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ F ++L+ PN + + + CA + D G +
Sbjct: 110 ---------------------RAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRI 148
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G I ++G V +CN+++ + K G+ AR F M ++D SW +++ ++ GDL
Sbjct: 149 HGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDL 208
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A ++FDE R+ SW+ +++ + G+ EA +QM R + +S+V AL
Sbjct: 209 VGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVF-AL 267
Query: 327 ASLKALRS-GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L + R G +H V+ +E+D F+ +L+D+Y KCGE + +FD +
Sbjct: 268 AGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQ 327
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+W++M+ GY NG+ EEA E F ML
Sbjct: 328 FAWSTMVAGYVQNGREEEALEF-------------------------------FRRMLRE 356
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + +SV A A+ +E+G+ +HG + KLG +D L +A+ D Y+KSG +E +
Sbjct: 357 GVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDA 416
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R+F KN WT M+ A G + ++ +F M+ I PNE+T+++VL ACSHS
Sbjct: 417 CRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHS 476
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV G YFN M+ Y I PN HY C+VD+ R+G L +A++FI ++ W +
Sbjct: 477 GLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKT 536
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LLS C+ +K+ + A+ A + L +L + YVL+SN+YA+ +W+D +R M E+ +
Sbjct: 537 LLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRV 596
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
RK G SW+ ++N VH F +P+
Sbjct: 597 RKQPGQSWIHLKNVVHRFVALDTSHPR 623
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 180/393 (45%), Gaps = 36/393 (9%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V+ N +++ + G+ A+R F M +++ SW +I ++ G + + F+ +
Sbjct: 160 DVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESS 219
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V SW + G +++G + EAL +++ +GV + T+S + ++ LG
Sbjct: 220 LRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQ 279
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + A E+ V SL+ + K GE++ A S+FDR W+
Sbjct: 280 LHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDR--------WS----------- 320
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ E + +WS M+A Y Q+G EEA FR+M R + V SA
Sbjct: 321 ---------DFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASA 371
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+ + G VH V K+G D +++A++D+YSK G +D +F S K+VA
Sbjct: 372 CANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVA-- 429
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNE 441
W +M+ Y +GQ A E+F M N+++ A++S + FN
Sbjct: 430 -LWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNL 488
Query: 442 MLLS-GEIPNKSTFSSVLCASASVASLEKGKDL 473
M G +PN ++ ++ L+K K+
Sbjct: 489 MQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNF 521
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 161/429 (37%), Gaps = 108/429 (25%)
Query: 15 TSFNSYIETCL--------------CLLKDITSQNLVIQGRALHGH----------LIKT 50
TS+N I CL L+D++S N ++ G HGH +++
Sbjct: 193 TSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRA 252
Query: 51 GIHKERYLTTRLLIM--YLGSR---KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEE 105
G+ Y + + + L SR + L +V L D V +++ + G +E
Sbjct: 253 GVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEE-DAFVGCSLMDMYCKCGEMES 311
Query: 106 AQRLFD---GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
A +FD E + +W+ +++G++++GR E
Sbjct: 312 ALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREE--------------------------- 344
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
EAL+ F ++L GV + +S+ ACA G V G + K G +
Sbjct: 345 ----EALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLA 400
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER--- 279
++++ + K G ++ A +F + ++V WT +L + G A IF M
Sbjct: 401 SAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIM 460
Query: 280 -NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMH 337
NE++ +++ + SG + + F M Y PNT +
Sbjct: 461 PNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHY------------------ 502
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH-VVSWNSMIGGYG 396
N ++DLY + G + + I E ++H V W +++
Sbjct: 503 -----------------NCMVDLYGRAGLLDKAK---NFIEENKISHEAVVWKTLLSACR 542
Query: 397 LNGQMEEAK 405
L+ +E A+
Sbjct: 543 LHKHIEYAQ 551
>gi|15228064|ref|NP_181235.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206293|sp|Q9SJK9.1|PP189_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g36980, mitochondrial; Flags: Precursor
gi|4883614|gb|AAD31583.1| hypothetical protein [Arabidopsis thaliana]
gi|330254236|gb|AEC09330.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 625
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 324/602 (53%), Gaps = 12/602 (1%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V T+ I+ K GR+ + F+ P + ++W + + + G EA+ LF +L S
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
KP++ +F++I CA + + + G + L+ ++GF + V NSLI + K + A
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 239 RSVFDRM--EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
VF M + R+ V+W +L ++ A +F EMP+R +W++MI+ + G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA-LRSGMHVHAHVLKIGIEKDVFISN 355
E LF++M FKP+ FS +++A ++ + + G VHA +LK G V N
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+++ Y+K G D +SI +V VSWNS+I G+ E+A E+F P++N
Sbjct: 245 SVLSFYTKLGSRDDAMRELESI---EVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
V+W+ +I+GY + + F EM+ SG + + +VL A + +A L GK +HG
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
+I GF ++G AL + YAK GDI+ + R F + +K+ +SW M+ G A +
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
++ L++ M + I P+ +T + +L CSHSGLV++G F SM Y I H TC++
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 596 DMLSRSGRLSEAEDFINS----MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
DM R G L+EA+D + + ++++W +LL C T+ + ++ R V + K+AE
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELG-REVSKVLKIAE 540
Query: 652 -EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+VLLSN+Y S GRW + +VR+ M E+G++K+ GCSW+EV NQV F +
Sbjct: 541 PSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSH 600
Query: 711 PK 712
P+
Sbjct: 601 PR 602
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 221/493 (44%), Gaps = 72/493 (14%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
SF + + TC S V GR + +I++G + L+ MY +L A
Sbjct: 72 SFTAILSTC-------ASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
N++ +D+ C RNEV+W +L+ +M + E
Sbjct: 125 NKVFRDM---------CC--------------------DSRNEVTWCSLLFAYMNAEQFE 155
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC- 194
++ F P + +W I G G L LF ++LES KP+ TFSS+ AC
Sbjct: 156 AALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A+ ++ G V ++ K G+ V NS+++ K+G D A + +E VSW
Sbjct: 216 ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWN 275
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
I+D +++G+ +A +F PE+N V+W+ MI Y ++G E+A R F +M +
Sbjct: 276 SIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS 335
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + VL A + L L G +H ++ G + ++ NAL++LY+KCG+ K+ F
Sbjct: 336 DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF 395
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
I KD +VSWN+M+ +G++G ++A +L+DN
Sbjct: 396 GDIANKD---LVSWNTMLFAFGVHGLADQALKLYDN------------------------ 428
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALT 493
M+ SG P+ TF +L + +E+G + ++K P +V T +
Sbjct: 429 -------MIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 494 DTYAKSGDIESSR 506
D + + G + ++
Sbjct: 482 DMFGRGGHLAEAK 494
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+V S I +G++ A+++FD MP+ + V+W+ +++ Y A+F ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
S P+ +F+++L AS+ +++ G+ + +I+ GF + + +L D Y K D S
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 505 SRRVFD---------------------------------RMPDKNEISWTVMVRGLAESG 531
+ +VF MP + +W +M+ G A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ ++LF+EM ++ P+ T S++ ACS
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 186/461 (40%), Positives = 266/461 (57%), Gaps = 6/461 (1%)
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T +LD +G + A +F ++ N +++ +I Y + + A +F QM +S
Sbjct: 46 TKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTN 105
Query: 314 ---PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P+ F V+ + + R GM VH V K G + NALID+Y+K G+ +
Sbjct: 106 SVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNA 165
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
VF+ + +DV +SWNS+I GY GQM A+ELFD+MP R VSW+ +I+GY
Sbjct: 166 CKVFEEMSHRDV---ISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMG 222
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+ VF EM + G P++ + +VL A A + +LE GK +H K GF +
Sbjct: 223 CYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICN 282
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL + YAK G I+ + +FD++ +K+ ISW+ M+ GLA G E+I LFEEM K + P
Sbjct: 283 ALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAP 342
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
NE+T L VL ACSH+GL D+GLKYF+ M Y+I+P HY C++D+L RSG L +A D
Sbjct: 343 NEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDT 402
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
I+ MP +PDS W SLLS C+ ++N QIA AVK L +L E YVLL+N+YA G+W
Sbjct: 403 ISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKW 462
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
D N+RKL+ K ++K+ G S +EV N V F D P
Sbjct: 463 EDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKP 503
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 159/285 (55%), Gaps = 6/285 (2%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE---SGVKPNEVTFS 188
G V + F++ N+ ++ A I + N A+ +F+++L + V P++ TF
Sbjct: 56 GHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFP 115
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
+ K+C I RLG+ V GL++K G + H N+LI + K G++ A VF+ M R
Sbjct: 116 FVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHR 175
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
DV+SW ++ ++++G + AR +FD+MP R VSW+ MI Y + G +A +FR+M
Sbjct: 176 DVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQ 235
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+P+ VL A A L AL G +H + K G + I NALI++Y+KCG
Sbjct: 236 MVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCID 295
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+ +FD +VEKD V+SW++MIGG +G+ EA +LF+ M K
Sbjct: 296 EAWNLFDQLVEKD---VISWSTMIGGLANHGKGYEAIQLFEEMCK 337
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 150/279 (53%), Gaps = 8/279 (2%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + N +I+ ++G+L A ++F+ M R+ +SW +LI G++K G++ + F+
Sbjct: 144 FHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDM 203
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P + ++SWT I G+ + G +AL +F ++ G++P+E++ ++ ACA++ +G
Sbjct: 204 PVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGK 263
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ K GF + +CN+LI + K G +D A ++FD++ ++DV+SW+ ++ G
Sbjct: 264 WIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHG 323
Query: 265 DLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCF 319
EA ++F+EM + NE+++ ++ + +G +E + F M+ Y +P +
Sbjct: 324 KGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHY 383
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
++ L L + + K+ I+ D I N+L+
Sbjct: 384 GCLIDLLGRSGCLGQALDT---ISKMPIKPDSRIWNSLL 419
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 221/748 (29%), Positives = 355/748 (47%), Gaps = 115/748 (15%)
Query: 5 LRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
LR S +S + ++ C CL I G+ +H IK G ++ + T L+
Sbjct: 83 LRRSGSPTDGSSLSCVLKVCGCLFDRIV-------GKQVHCQCIKCGFVEDVSVGTSLVD 135
Query: 65 MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVS 120
MY+ + + + ++ ++V ++ Q G E+A +LF M + N +
Sbjct: 136 MYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFT 195
Query: 121 WTALISGFMKHGRVEESMWY-----------------------------------FERNP 145
+ A++ G G VE+ + F+
Sbjct: 196 FAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME 255
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N +SW + I GFV NG EA +LF ++ GVK + F+++ K CA I +
Sbjct: 256 NRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQ 315
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + K G + +++ +L+ K E+D A +F M
Sbjct: 316 LHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV----------------- 358
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+N VSW+ +I+ Y Q+G + A LF QM R +PN +S +L+A
Sbjct: 359 -------------QNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA 405
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A++ S +HA V+K E + AL D YSK G+
Sbjct: 406 NAAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDAN----------------- 444
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
EA ++F+ + +++ V+WSA++SGY + + +F ++
Sbjct: 445 -----------------EAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKE 487
Query: 446 GEIPNKSTFSSVLCASAS-VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G PN+ TFSSVL A A+ AS+E+GK H IK GF + + +AL YAK G+IES
Sbjct: 488 GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIES 547
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ VF R D++ +SW M+ G A+ G K+S+ +FEEM ++ + +T + V+ AC+H
Sbjct: 548 ANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTH 607
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+GLV++G +YF+ M Y+I P HY+C+VD+ SR+G L +A D IN MPF + W
Sbjct: 608 AGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 667
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL+ C+ + N Q+ E A + L L + A YVLLSNIYA+AG W + VRKLM K
Sbjct: 668 TLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKK 727
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K G SW+EV+N+ F +P+
Sbjct: 728 VKKEAGYSWIEVKNKTFSFMAGDLSHPQ 755
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 151/517 (29%), Positives = 238/517 (46%), Gaps = 75/517 (14%)
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
S F+ P Q + + F +N + EAL LFL L SG + + S + K C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ D +G V K GF + VSV SL+ + +K V+ VFD M ++VVSWT +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
L A Y Q+G E+A +LF QM KPN
Sbjct: 165 L-------------------------------AGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F+ VL LA+ A+ G+ VH V+K G++ +F+ N+++++YSK D + VFDS
Sbjct: 194 FTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDS 253
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ ++ VSWNSMI G+ NG EA F
Sbjct: 254 MENRN---AVSWNSMIAGFVTNGLDLEA-------------------------------F 279
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F M L G ++ F++V+ A++ + K LH ++IK G +D+ + TAL Y
Sbjct: 280 ELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAY 339
Query: 497 AKSGDIESSRRVFDRMPD-KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
+K +I+ + ++F M +N +SWT ++ G ++G ++NLF +M + + PN T
Sbjct: 340 SKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTY 399
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
++L A + V + ++ Y P+ T + D S+ G +EA I +
Sbjct: 400 STILTA---NAAVSPSQIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAK-IFELI 453
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
E D AW+++LSG Y E AVK +LA+E
Sbjct: 454 DEKDIVAWSAMLSG---YAQMGDIEGAVKIFLQLAKE 487
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 198/480 (41%), Gaps = 84/480 (17%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
++++FDE P++ + ++ ++++ +EA LF + R + S S VL
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L G VH +K G +DV + +L+D+Y K +DG VFD E V +VVSW
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFD---EMRVKNVVSW 161
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
S++ GY NG E+A +L F++M L G
Sbjct: 162 TSLLAGYRQNGLNEQALKL-------------------------------FSQMQLEGIK 190
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN TF++VL A+ ++EKG +H +IK G +F+G ++ + Y+KS + ++ V
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC------ 562
FD M ++N +SW M+ G +G E+ LF M + + +V+ C
Sbjct: 251 FDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEM 310
Query: 563 -----------------------------SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
S +D K F M + N+ +T
Sbjct: 311 SFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVS----WTA 366
Query: 594 VVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
++ ++GR A + M E P+ ++++L+ QI VK +
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNY--- 423
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK-----SGGCSWVEVRNQVHFFFQ 705
E P+ LS+ Y+ G +A + +L+ EK + SG ++ V F Q
Sbjct: 424 ENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQ 483
>gi|357139571|ref|XP_003571354.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 204/606 (33%), Positives = 322/606 (53%), Gaps = 34/606 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + + G L +AQ+LFD MP R+ +SWTAL++ + +G + F+ P +N
Sbjct: 46 NALLTSYGRRGMLRDAQQLFDRMPRRDVISWTALLTAYADNGDPASARLVFDDMPRRNAA 105
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + +++ G A LF K+ N V++ ++ A R +VF +
Sbjct: 106 SWNALLSLYLRAGQPAAAHALFSKMPAR----NAVSYGAMISGLARAGMLREAEAVFAEM 161
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ V N+LI ++ GE+ LA VF+ M RDV+SWT ++D + G + EAR
Sbjct: 162 -PWRWRDPVG-SNALIAAYVRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNGSVLEAR 219
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
++F+ MPERN VSW+ MI Y + G + LF+ M R + NT+ S+ L A A
Sbjct: 220 KVFEAMPERNVVSWTSMILGYVKLGRRRDGLLLFQNMRREGVQVNTTTLSVALDACAESS 279
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-------- 382
+R G+ +H ++ +G E DVF+ ++LI LYS+ G D R VF + KDV
Sbjct: 280 LVREGIQIHGLIIAMGFEMDVFLGDSLITLYSRFGWMVDARRVFAYMTWKDVVSWNSLIT 339
Query: 383 ----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
AHV VSW SM+ G+ G + EA ELF+ MP +++V+W+A+
Sbjct: 340 GYVQHNMVEEAHVLFKLMPEKDAVSWTSMVVGFANRGWITEAIELFEQMPGKDEVAWTAV 399
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
IS + + + F M G PN FS +L A AS+ L +G H I +G+
Sbjct: 400 ISSLVTNGDYLSAVRWFCRMAQEGCKPNTIAFSCLLSALASLTMLNQGMQAHAYAINMGW 459
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+D + T+L YAK G + + VF + + + I+ M+ + +++ LF +
Sbjct: 460 IFDSSIHTSLVSMYAKCGRLAEAYHVFSSISNPSLIATNSMITAFVQHDLVEDAFKLFTK 519
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ PN +T L +L C+ +GLV +G YF SM+ +Y I+PN HYTC+VD+L R+G
Sbjct: 520 MQNDGHKPNHVTFLGILTGCARAGLVQQGYNYFGSMKSVYGIEPNPDHYTCMVDLLGRAG 579
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L+EA + INSMP +S+AWA+LLS + + A+ A + L ++ Y +LSN
Sbjct: 580 LLAEALEMINSMPQNDNSDAWAALLSASSLHSSLTFAKIAAQKLLEMDPYDATAYTVLSN 639
Query: 663 IYASAG 668
+++SAG
Sbjct: 640 MFSSAG 645
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 217/463 (46%), Gaps = 66/463 (14%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N +I A ++ G L A R+F+GM R+ +SWTA++ G K+G V E+ FE P
Sbjct: 167 DPVGSNALIAAYVRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNGSVLEARKVFEAMP 226
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SWT+ I G+V+ G + L LF + GV+ N T S ACAE + R G+
Sbjct: 227 ERNVVSWTSMILGYVKLGRRRDGLLLFQNMRREGVQVNTTTLSVALDACAESSLVREGIQ 286
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ GLI GFE V + +SLITL + G + AR VF M +DVVSW ++ +++
Sbjct: 287 IHGLIIAMGFEMDVFLGDSLITLYSRFGWMVDARRVFAYMTWKDVVSWNSLITGYVQHNM 346
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ------------------- 306
+ EA +F MPE++ VSW+ M+ + G+ EA LF Q
Sbjct: 347 VEEAHVLFKLMPEKDAVSWTSMVVGFANRGWITEAIELFEQMPGKDEVAWTAVISSLVTN 406
Query: 307 ------------MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
M + KPNT FS +LSALASL L GM HA+ + +G D I
Sbjct: 407 GDYLSAVRWFCRMAQEGCKPNTIAFSCLLSALASLTMLNQGMQAHAYAINMGWIFDSSIH 466
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+ +Y+KCG + VF SI +++ NSM
Sbjct: 467 TSLVSMYAKCGRLAEAYHVFSSISNPS---LIATNSM----------------------- 500
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
I+ +++H + F +F +M G PN TF +L A +++G +
Sbjct: 501 --------ITAFVQHDLVEDAFKLFTKMQNDGHKPNHVTFLGILTGCARAGLVQQGYNYF 552
Query: 475 GKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
G + + G + T + D ++G + + + + MP +
Sbjct: 553 GSMKSVYGIEPNPDHYTCMVDLLGRAGLLAEALEMINSMPQND 595
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 163/361 (45%), Gaps = 33/361 (9%)
Query: 23 TCLCLLKDITSQN-LVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
T L + D +++ LV +G +HG +I G + +L L+ +Y ++A +
Sbjct: 266 TTLSVALDACAESSLVREGIQIHGLIIAMGFEMDVFLGDSLITLYSRFGWMVDARRVFAY 325
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+ D+V N +I +Q +EEA LF MPE++ VSWT+++ GF G + E++ F
Sbjct: 326 MTWKDVVSWNSLITGYVQHNMVEEAHVLFKLMPEKDAVSWTSMVVGFANRGWITEAIELF 385
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
E+ P ++ ++WTA I V NG A++ F ++ + G KPN + FS + A A +
Sbjct: 386 EQMPGKDEVAWTAVISSLVTNGDYLSAVRWFCRMAQEGCKPNTIAFSCLLSALASLTMLN 445
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G+ G+ S+ SL+++ +
Sbjct: 446 QGMQAHAYAINMGWIFDSSIHTSLVSM-------------------------------YA 474
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L EA +F + + ++ + MI + Q E+AF+LF +M KPN F
Sbjct: 475 KCGRLAEAYHVFSSISNPSLIATNSMITAFVQHDLVEDAFKLFTKMQNDGHKPNHVTFLG 534
Query: 322 VLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+L+ A ++ G + + + GIE + ++DL + G + + +S+ +
Sbjct: 535 ILTGCARAGLVQQGYNYFGSMKSVYGIEPNPDHYTCMVDLLGRAGLLAEALEMINSMPQN 594
Query: 381 D 381
D
Sbjct: 595 D 595
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 314/611 (51%), Gaps = 55/611 (9%)
Query: 123 ALISGFMKHGRVEESMWYFE---RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
A++S + K G + + F+ Q+++SW + + ++ + AL LF K+
Sbjct: 299 AVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRH 358
Query: 180 V-KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
+ P+ ++ +I ACA + G V G ++G V V N+++ + K G+++ A
Sbjct: 359 LMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEA 418
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQS 294
VF RM+ +DVVSW ++ + + G L A +F+ M E N V+W+ +I Y Q
Sbjct: 419 NKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQR 478
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE------ 348
G EA +FRQM +PN +LSA S+ AL G H + +K +
Sbjct: 479 GQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDP 538
Query: 349 --KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
D+ + N LID+Y+KC T E A++
Sbjct: 539 GADDLKVINGLIDMYAKCQST----------------------------------EVARK 564
Query: 407 LFDNM-PKRNDV-SWSAIISGYLEHKQFDLVFAVFNEML-LSGEI-PNKSTFSSVLCASA 462
+FD++ PK DV +W+ +I GY +H + +F+ M + I PN T S L A A
Sbjct: 565 MFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACA 624
Query: 463 SVASLEKGKDLHGKIIKLGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+A+L G+ +H +++ + +F+ L D Y+KSGD+++++ VFD MP +N +SWT
Sbjct: 625 RLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWT 684
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ G G ++++ +F+EM K + P+ +T L VL+ACSHSG+VD G+ +FN M
Sbjct: 685 SLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKD 744
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
+ + P HY C+VD+ R+GRL EA IN MP EP W +LLS C+ + N ++ E
Sbjct: 745 FGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEF 804
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A L +L + Y LLSNIYA+A RW D +R M G++K GCSW++ R V
Sbjct: 805 AANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVA 864
Query: 702 FFFQKTDHNPK 712
F+ +P+
Sbjct: 865 TFYVGDRSHPQ 875
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/576 (28%), Positives = 272/576 (47%), Gaps = 74/576 (12%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQ--NVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
T LI ++ ++ ER P +V W I + G + L+ ++ G
Sbjct: 195 TNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLG 254
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
P+ TF + KACA ++ LG S+ + ++GF +V VCN+++++ K G + A
Sbjct: 255 WTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAH 314
Query: 240 SVFDRMEKR---DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
++FD + R D+VSW ++ ++ D A +F +M
Sbjct: 315 NMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKM-------------------- 354
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
TR+ P+ +L A ASL A G VH ++ G+ DVF+ NA
Sbjct: 355 ----------TTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNA 404
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN- 415
++D+Y+KCG+ ++ VF + KD VVSWN+M+ GY G++E A LF+ M + N
Sbjct: 405 VVDMYAKCGKMEEANKVFQRMKFKD---VVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461
Query: 416 ---DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
V+W+A+I+GY + Q VF +M G PN T S+L A SV +L GK+
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521
Query: 473 LHGKIIK----LGFP----YDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKNEISWTV 522
H IK L P D+ + L D YAK E +R++FD + D++ ++WTV
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581
Query: 523 MVRGLAESGYAKESINLFEEMEK--TSITPNELTILSVLFACSHSGLVDKGLK------- 573
M+ G A+ G A ++ LF M K SI PN+ T+ L AC+ + G +
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641
Query: 574 --YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
Y + M + N C++DM S+SG + A+ ++MP + ++ +W SL++G
Sbjct: 642 NFYGSVMLFVAN---------CLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYG 691
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
+ + A R + K+ P G L +YA +
Sbjct: 692 MHGRGEDALRVFDEMRKVPLV-PDGITFLVVLYACS 726
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 191/374 (51%), Gaps = 55/374 (14%)
Query: 63 LIMYLGSRKSLEANEIVKDLNGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMP 114
L+ L + SL A+ + ++GF D+ V N +++ + G +EEA ++F M
Sbjct: 367 LVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMK 426
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQN----VISWTAAICGFVQNGFSFEALK 170
++ VSW A+++G+ + GR+E ++ FER +N V++WTA I G+ Q G EAL
Sbjct: 427 FKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALD 486
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLG--LSVFGLIFKAGFE------KHVSVC 222
+F ++ + G +PN VT S+ AC + G + + F + + V
Sbjct: 487 VFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVI 546
Query: 223 NSLITLSLKMGEVDLARSVFDRM--EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
N LI + K ++AR +FD + + RDVV+WTV++ + + GD A ++F M + +
Sbjct: 547 NGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMD 606
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
+ S KPN S L A A L ALR G VHA
Sbjct: 607 K-----------------------------SIKPNDFTLSCALVACARLAALRFGRQVHA 637
Query: 341 HVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+VL+ +F++N LID+YSK G+ ++VFD++ +++ VSW S++ GYG++G
Sbjct: 638 YVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRN---AVSWTSLMTGYGMHG 694
Query: 400 QMEEAKELFDNMPK 413
+ E+A +FD M K
Sbjct: 695 RGEDALRVFDEMRK 708
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 174/478 (36%), Positives = 273/478 (57%), Gaps = 39/478 (8%)
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+V+ + VFD + DV S + LG R++F+ MP+R+ VSW+ +I+ Q
Sbjct: 119 QVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMPKRDIVSWNTVISGNAQ 173
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
+G E+A + R+M +P++ S VL A L G +H + ++ G + DVFI
Sbjct: 174 NGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFI 233
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
++LID+Y+KC D + +F +P+
Sbjct: 234 GSSLIDMYAKCTRVDD----------------------------------SCRVFYMLPQ 259
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
+ +SW++II+G +++ FD F +ML++ PN +FSS++ A A + +L GK L
Sbjct: 260 HDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQL 319
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
HG II+ F +VF+ +AL D YAK G+I ++R +FD+M + +SWT M+ G A G+A
Sbjct: 320 HGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHA 379
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
++I+LF+ ME + PN + ++VL ACSH+GLVD+ KYFNSM Y I P HY
Sbjct: 380 YDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAA 439
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
V D+L R GRL EA +FI+ M EP + W++LL+ C+ +KN ++AE+ K L+ + ++
Sbjct: 440 VADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQN 499
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
YVLLSNIY++AGRW DA +R M +KG++K CSW+E++N+VH F +P
Sbjct: 500 IGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHP 557
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 214/495 (43%), Gaps = 83/495 (16%)
Query: 17 FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY---------- 66
F S +++C L+KD+ G ++HG +I+ G+ + Y L+ MY
Sbjct: 13 FPSVLKSC-TLMKDLRF------GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGG 65
Query: 67 ---LGSRKSL----EANEIVKDLNGFDLVVHNCMINANI----QWGNLEEAQRLFDGMPE 115
K L E EI K N DL C ++ + Q G+L + + +
Sbjct: 66 VQRFCDSKMLGGIPEPREIGKCSNSHDL---PCELDERVAGIDQNGDLNQMSNILYQVNT 122
Query: 116 RNEVSWTALISGFMKHGRVEESMWY-------FERNPFQNVISWTAAICGFVQNGFSFEA 168
+V S + + E+ +Y FE P ++++SW I G QNG +A
Sbjct: 123 YKKVFDEGKTSDV--YSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDA 180
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L + ++ + ++P+ T SS+ AE + G + G + G++ V + +SLI +
Sbjct: 181 LMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDM 240
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K VD + VF + + D +SW I I
Sbjct: 241 YAKCTRVDDSCRVFYMLPQHDGISWNSI-------------------------------I 269
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
A Q+G +E + F+QM KPN FS ++ A A L L G +H ++++ +
Sbjct: 270 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 329
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
+VFI++AL+D+Y+KCG + R +FD + ++ +VSW +MI GY L+G +A LF
Sbjct: 330 GNVFIASALVDMYAKCGNIRTARWIFDKM---ELYDMVSWTAMIMGYALHGHAYDAISLF 386
Query: 409 DNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE-IPNKSTFSSVLCASAS 463
M K N V++ A+++ D + FN M IP +++V
Sbjct: 387 KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 446
Query: 464 VASLEKG----KDLH 474
V LE+ D+H
Sbjct: 447 VGRLEEAYEFISDMH 461
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 120/228 (52%), Gaps = 11/228 (4%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
++LI + K RV++S F P + ISW + I G VQNG E LK F ++L + +K
Sbjct: 235 SSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIK 294
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN V+FSSI ACA + LG + G I ++ F+ +V + ++L+ + K G + AR +
Sbjct: 295 PNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWI 354
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYP 297
FD+ME D+VSWT ++ + G +A +F M + N V++ ++ + +G
Sbjct: 355 FDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLV 414
Query: 298 EEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALR------SGMHV 338
+EA++ F MT+ Y P ++ V L + L S MH+
Sbjct: 415 DEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 462
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 70/187 (37%)
Query: 11 INP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
I P SF+S + C +T+ +L G+ LHG++I++ ++ + L+ MY
Sbjct: 293 IKPNHVSFSSIMPAC----AHLTTLHL---GKQLHGYIIRSRFDGNVFIASALVDMY--- 342
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+ GN+ A+ +FD M + VSWTA+I G+
Sbjct: 343 ----------------------------AKCGNIRTARWIFDKMELYDMVSWTAMIMGYA 374
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
HG +++A+ LF ++ GVKPN V F +
Sbjct: 375 LHGH-------------------------------AYDAISLFKRMEVEGVKPNYVAFMA 403
Query: 190 ICKACAE 196
+ AC+
Sbjct: 404 VLTACSH 410
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 195/646 (30%), Positives = 330/646 (51%), Gaps = 71/646 (10%)
Query: 106 AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
A +LFD MP+R++++W ++ ++ G E+
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEK----------------------------- 72
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
A++LF ++ SG K + T + + C+ F G + G + + G E +VS+CNSL
Sbjct: 73 --AVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNE 281
I + + G+++L+R VF+ M+ R++ SW IL + ++G + +A + DEM + +
Sbjct: 131 IVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI 190
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
V+W+ +++ Y G ++A + ++M KP+TS S +L A+A L+ G +H +
Sbjct: 191 VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY 250
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA------------------ 383
+L+ + DV++ LID+Y K G R+VFD + K++
Sbjct: 251 ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA 310
Query: 384 --------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
++WNS+ GY G+ E+A ++ M ++ N VSW+AI SG
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
++ F VF +M G PN +T S++L ++ L GK++HG ++ D
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICD 430
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
++ TAL D Y KSGD++S+ +F + +K+ SW M+ G A G +E I F M +
Sbjct: 431 AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P+ +T SVL C +SGLV +G KYF+ M Y I P H +C+VD+L RSG L
Sbjct: 491 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD 550
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EA DFI +M +PD+ W + LS CK +++ ++AE A K L L + A Y+++ N+Y+
Sbjct: 551 EAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYS 610
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ RW D +R LM +R SW+++ VH F+ + +P
Sbjct: 611 NLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHP 656
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 200/374 (53%), Gaps = 13/374 (3%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
LG A ++FDEMP+R++++W+ ++ +SG E+A LFR+M K S +L
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++ + G +H +VL++G+E +V + N+LI +YS+ G+ + R VF+S+ +++++
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS-- 156
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
SWNS++ Y G +++A L D M K + V+W++++SGY AV
Sbjct: 157 -SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M ++G P+ S+ SS+L A A L+ GK +HG I++ YDV++ T L D Y K+G
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ +R VFD M KN ++W +V GL+ + K++ L MEK I P+ +T S+
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG 335
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---P 618
+ G +K L M+ + PN +T + S++G A M E P
Sbjct: 336 YATLGKPEKALDVIGKMKE-KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 619 DSNAWASLLS--GC 630
++ ++LL GC
Sbjct: 395 NAATMSTLLKILGC 408
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 147/647 (22%), Positives = 266/647 (41%), Gaps = 159/647 (24%)
Query: 19 SYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI 78
+Y T + LL+ +++ +GR +HG++++ G+ + L++MY SR
Sbjct: 87 AYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMY--SRN------- 137
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
G LE ++++F+ M +RN SW +++S + K G V++++
Sbjct: 138 ----------------------GKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAI 175
Query: 139 WYFERNPF----QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ ++++W + + G+ G S +A+ + ++ +G+KP+ + SS+ +A
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
AE +LG ++ G I + V V +LI + +K G + AR VFD M+ +++V+W
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWN 295
Query: 255 VILD-------------VFIEM-------------------GDLGEARRIFD---EMPER 279
++ + I M LG+ + D +M E+
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
N VSW+ + + +++G A ++F +M PN + S +L L L L SG
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG 415
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
VH L+ + D +++ AL+D+Y K G+ + +F I K +A SWN M+ GY
Sbjct: 416 KEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA---SWNCMLMGY 472
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+ G+ EE A F+ ML +G P+ TF+
Sbjct: 473 AMFGRGEEG-------------------------------IAAFSVMLEAGMEPDAITFT 501
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
SVL + SG ++ + FD M +
Sbjct: 502 SVLSVCKN-----------------------------------SGLVQEGWKYFDLMRSR 526
Query: 516 NEISWTV-----MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS-HSG--L 567
I T+ MV L SGY E+ + + M S+ P+ + L +C H L
Sbjct: 527 YGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAFLSSCKIHRDLEL 583
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ K +EP N +Y ++++ S R + E N M
Sbjct: 584 AEIAWKRLQVLEP-----HNSANYMMMINLYSNLNRWEDVERIRNLM 625
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 4/245 (1%)
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y G T G L+ + D VVS + +G YG + A +LFD MPKR+D++W
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDT-RVVS--ASMGFYGRCVSLGFANKLFDEMPKRDDLAW 57
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+ I+ L ++ +F EM SG ST +L ++ +G+ +HG +++
Sbjct: 58 NEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR 117
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG +V + +L Y+++G +E SR+VF+ M D+N SW ++ + GY ++I L
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
+EME + P+ +T S+L + GL + M+ I +KP+ + ++ ++
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLKPSTSSISSLLQAVA 236
Query: 600 RSGRL 604
G L
Sbjct: 237 EPGHL 241
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 307/588 (52%), Gaps = 36/588 (6%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVT 186
+++ R ++ F+ P + WT I G + G + ++ F ++L G PN
Sbjct: 55 WVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFV 114
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+++ + CA + D G V G + + G V +CN+++ + K G+ + AR VF M
Sbjct: 115 LAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMA 174
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+RD VSW + + I+ GD+ + ++FDE P R+ SW+ +I+ +SG+ +A R+
Sbjct: 175 ERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRR 234
Query: 307 MTRYS--FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
M + F T + VL+ + L L G +H VL +E D F+ ++L+D+Y KC
Sbjct: 235 MAQAGVVFNHYTYSTAFVLAGMLLLPDL--GRQLHGRVLIAALEGDAFVRSSLMDMYCKC 292
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G + VFD W+ + + + +WS +++
Sbjct: 293 GLLEAAASVFDH-----------WSPLT--------------------RDMNFAWSTMVA 321
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
GY+++ + + +F ML G ++ T +SV A A+V +E+G+ +HG + KL +
Sbjct: 322 GYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKL 381
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D L +A+ D YAK G++E +R +FDR KN WT M+ A G + +I LFE M
Sbjct: 382 DAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMT 441
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+TPNE+T++ VL ACSH GLV +G YF M+ Y I P+ HY C+VD+ RSG L
Sbjct: 442 AEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLL 501
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
+A++FI ++ W +LLS C+ +++ + A+ A + L +L + YV+LSNIY
Sbjct: 502 DKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIY 561
Query: 665 ASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A+ +W D +R M E+ +RK G SW+ ++N VH F +P+
Sbjct: 562 ATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQ 609
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 193/388 (49%), Gaps = 9/388 (2%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKP 314
+L ++ +AR +FDE P R W++ I+ + G + R F +M P
Sbjct: 51 VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N + V+ A + + SG VH +L+ G+ DV + NA++D+Y+KCG+ + R VF
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
++ E+D VSWN IG +G + + +LFD P R+ SW+ IISG +
Sbjct: 171 GAMAERD---AVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAAD 227
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+ M +G + N T+S+ + + + G+ LHG+++ D F+ ++L D
Sbjct: 228 ALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMD 287
Query: 495 TYAKSGDIESSRRVFDR---MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
Y K G +E++ VFD + +W+ MV G ++G +E+++LF M + + +
Sbjct: 288 MYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAAD 347
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
T+ SV AC++ G+V++G + +E ++ K + + +VDM ++ G L +A
Sbjct: 348 RFTLTSVAAACANVGMVEQGRQVHGCVEKLW-YKLDAPLASAIVDMYAKCGNLEDARSIF 406
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIA 639
+ + W S+L ++ +IA
Sbjct: 407 DR-ACTKNIAVWTSMLCSYASHGQGRIA 433
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 35/345 (10%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D+V+ N +++ + G E A+R+F M ER+ VSW I ++ G + SM F+ +
Sbjct: 145 LDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDES 204
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++ SW I G +++G + +AL ++ ++GV N T+S+ + LG
Sbjct: 205 PLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGR 264
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ G + A E V +SL+ + K G ++ A SVFD W+
Sbjct: 265 QLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDH--------WS---------- 306
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ +WS M+A Y Q+G EEA LFR+M R + + V +
Sbjct: 307 ----------PLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAA 356
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A++ + G VH V K+ + D +++A++D+Y+KCG +D R +FD K++A
Sbjct: 357 ACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIA- 415
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
W SM+ Y +GQ A ELF+ M N+++ ++S
Sbjct: 416 --VWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSA 458
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 151/397 (38%), Gaps = 84/397 (21%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERY-----------------LTTRLLIMYLGSR 70
L+D TS N +I G GH H R L LL+ LG
Sbjct: 206 LRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLG-- 263
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ L ++ L G D V + +++ + G LE A +FD W+ L
Sbjct: 264 RQLHGRVLIAALEG-DAFVRSSLMDMYCKCGLLEAAASVFD--------HWSPLTRDMN- 313
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+W+ + G+VQNG EAL LF ++L GV + T +S+
Sbjct: 314 -------------------FAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSV 354
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
ACA + G V G + K ++ + ++++ + K G ++ ARS+FDR +++
Sbjct: 355 AAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNI 414
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
WT M+ Y G A LF +MT
Sbjct: 415 AVWT-------------------------------SMLCSYASHGQGRIAIELFERMTAE 443
Query: 311 SFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
PN VLSA + + + G ++ + GI + N ++DLY + G
Sbjct: 444 KMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDK 503
Query: 370 GRLVFDSIVEKDVAH-VVSWNSMIGGYGLNGQMEEAK 405
+ + I E ++ H + W +++ L+ E AK
Sbjct: 504 AK---NFIEENNINHEAIVWKTLLSACRLHQHNEYAK 537
>gi|18481717|gb|AAL73539.1|AF466200_18 hypothetical protein S250_18C08.29 [Sorghum bicolor]
Length = 679
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 328/632 (51%), Gaps = 34/632 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + + G +++AQ+LFD MP R+ +SWTAL++ + G + + + F+ P +N
Sbjct: 45 NALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAA 104
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + +++ G A LF K N V++ +I A R +V+ +
Sbjct: 105 SWNALVSLYLRAGRPAAAHALFCK----APAKNAVSYGAIITGLARAGMLREAQAVYWEM 160
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ S N++I L+ GE+ +A VFD M RDV+SW+ ++D + G + EAR
Sbjct: 161 PPRWRDPVGS--NAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEAR 218
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
R+F+ MPERN VSW+ MI Y + G + LF M R + N S+VL A
Sbjct: 219 RLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQAS 278
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-------- 382
+ G VH ++++G +D+F+ ++LI +YS+ G D R +F + +KD+
Sbjct: 279 LVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLIT 338
Query: 383 ----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
AHV +SW SM+ G+ G M E+ ELF+ MP +++++W+A+
Sbjct: 339 GYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAV 398
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+S + + + F +M G PN FS +L A AS+A L +G H + +G+
Sbjct: 399 MSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGW 458
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+D + +L YAK G + + RVF + + I+ M+ A+ G A+++ LF
Sbjct: 459 IFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNR 518
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ PN +T L +L AC+ +GLV G YF SM +Y I+PN HYTC+VD+L R+G
Sbjct: 519 MQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGRAG 578
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L+EA + NSMP + +AW +LLS + N +A+ A + L ++ Y +LSN
Sbjct: 579 FLNEALEMTNSMPQKDYPDAWKALLSSSSLHSNLDLAKLAAQRLLEIDPYDATAYTVLSN 638
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+++SAG D V+ KS G S +
Sbjct: 639 MFSSAGMKEDEEMVKVAQLSNMASKSPGYSLI 670
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 225/491 (45%), Gaps = 95/491 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N MI ++ G L A R+FDGM R+ +SW+A++ G K+G V E+ FE P
Sbjct: 166 DPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAMP 225
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SWT+ I G+V++G + L LFL + GV+ N +T S + CA+ + G
Sbjct: 226 ERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQ 285
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V L+ + GF + + + +SLI + + G + ARS+F M ++D+VSW ++ +++
Sbjct: 286 VHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDM 345
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE-------------------------- 299
+ +A +F MPE++ +SW+ M+ + G+ E
Sbjct: 346 IEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVAN 405
Query: 300 -----AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
A R F QM++ +PNT FS +LSALASL L G+ HA+ + +G D +
Sbjct: 406 GNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVH 465
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+ +Y+KCG + VF I +++ NSMI + +G E+A
Sbjct: 466 ASLVTMYAKCGRLAEAHRVFSCISHPS---LIATNSMITAFAQHGLAEDA---------- 512
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
F +FN M G+ PN TF +L A A ++ G
Sbjct: 513 ---------------------FKLFNRMQYDGQRPNHVTFLGILTACARAGLVQHG---- 547
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
Y+ F ES R V+ P+ + +T MV L +G+
Sbjct: 548 ---------YNYF---------------ESMRSVYGIQPNPDH--YTCMVDLLGRAGFLN 581
Query: 535 ESINLFEEMEK 545
E++ + M +
Sbjct: 582 EALEMTNSMPQ 592
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 164/360 (45%), Gaps = 32/360 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +L +LV +G +H +I+ G ++ +L L+IMY +A + +
Sbjct: 266 TLSVVLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFM 325
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
N D+V N +I +Q +E+A LF MPE++ +SWT+++ GF G + ES+ FE
Sbjct: 326 NQKDIVSWNSLITGYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFE 385
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P ++ I+W A + V NG A++ F ++ + G +PN V FS + A A +
Sbjct: 386 QMPVKDEIAWAAVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQ 445
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
GL G+ +V SL+T+ K G
Sbjct: 446 GLQAHAYAVNMGWIFDSAVHASLVTMYAKCGR---------------------------- 477
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
L EA R+F + + ++ + MI + Q G E+AF+LF +M +PN F +
Sbjct: 478 ---LAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDGQRPNHVTFLGI 534
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L+A A ++ G + + + GI+ + ++DL + G + + +S+ +KD
Sbjct: 535 LTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGRAGFLNEALEMTNSMPQKD 594
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 211/727 (29%), Positives = 354/727 (48%), Gaps = 106/727 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL T Q + +G+A+H L++TG YLT L+ +Y ++A + + + D
Sbjct: 16 LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75
Query: 87 LVVHNCMINANIQWGN------LEEAQRL-----------FDGM-------PER------ 116
+V NC+IN Q G +E QR+ F G+ PE
Sbjct: 76 VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135
Query: 117 -----------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
+ ++LI+ + K G + ++ F+ P +N +SW I G+ +
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
FEA +LF + ++ ++S+ A + G + L K G SV N+L
Sbjct: 196 FEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+T+ K G +D +A + F+ ++++++WS
Sbjct: 256 VTMYGKCGCLD-------------------------------DALKTFELSGDKDDITWS 284
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
MI Y Q+G EA LF M KP+ F V++A + + AL G +H + LK
Sbjct: 285 AMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKA 344
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G E ++ AL+D+Y+KCG D A+
Sbjct: 345 GYECQIYFMTALVDMYAKCGSLVD----------------------------------AR 370
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
+ FD + + + V W+++ISGY ++ + + ++ M + +P++ T +SVL A +S+A
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+LE+GK +H + IK GF +V +G+AL+ YAK G +E VF RMP ++ ++W M+
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
GL+++G +++ LFEE+ + P+ +T ++VL ACSH GLV++G YF M + I
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
P HY C+VD+LSR+G+L E ++FI S + W LL C+ Y+N ++ A +
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
L +L + + Y+LLS+IY + GR D VR+LM +G+ K GCSW+E+++QVH F
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 670
Query: 706 KTDHNPK 712
+P+
Sbjct: 671 GDQIHPQ 677
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 204/451 (45%), Gaps = 67/451 (14%)
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ P +F + C D + G ++ + + G V + NSL+ L K G + A+
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
VF+ + +DVVSW +++ + + G +G +S ++
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVG----------------YSFVM----------- 98
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
LF++M + PN FS V +A +S G+ HA +K DVF+ ++LI+
Sbjct: 99 --ELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLIN 156
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y K G D R VFD+I E++ VSW ++I GY + EA ELF M +
Sbjct: 157 MYCKIGCMLDARKVFDTIPERN---TVSWATIISGYAMERMAFEAWELFXLMRREEGA-- 211
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
H +F ++SVL A + GK +H +K
Sbjct: 212 ---------HDKF--------------------IYTSVLSALTVPDLVHYGKQIHCLALK 242
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
G +G AL Y K G ++ + + F+ DK++I+W+ M+ G A++G + E++NL
Sbjct: 243 NGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNL 302
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN-SMEPIYNIKPNGRHYTCVVDML 598
F M P+E T + V+ ACS G +++G + S++ Y + T +VDM
Sbjct: 303 FYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQI--YFMTALVDMY 360
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ G L +A + + EPD W S++SG
Sbjct: 361 AKCGSLVDARKGFDYLK-EPDIVLWTSMISG 390
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 48/330 (14%)
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M Y P F +L K L+ G +HA +L+ G V+++N+L++LY+KCG
Sbjct: 1 MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCG- 59
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
SIV+ AK +F+++ ++ VSW+ +I+GY
Sbjct: 60 ---------SIVK------------------------AKLVFESITNKDVVSWNCLINGY 86
Query: 427 LEHKQ--FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
+ + V +F M +PN TFS V A++S G H IK Y
Sbjct: 87 SQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFY 146
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
DVF+G++L + Y K G + +R+VFD +P++N +SW ++ G A A E+ LF M
Sbjct: 147 DVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMR 206
Query: 545 KTSITPNELTILSVLFACSHSGLVDKG-----LKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
+ ++ SVL A + LV G L N + I ++ +V M
Sbjct: 207 REEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG------NALVTMYG 260
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ G L +A + + D W+++++G
Sbjct: 261 KCGCLDDALKTFE-LSGDKDDITWSAMITG 289
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P +F +L L+KGK +H ++++ G V+L +L + YAK G I ++ V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKES--INLFEEMEKTSITPNELTILSVLFACSHSG 566
F+ + +K+ +SW ++ G ++ G S + LF+ M + PN T V A S S
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 567 LVDKGLKYFN---SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
GL+ Y++ + +++M + G + +A +++P E ++ +W
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVG----SSLINMYCKIGCMLDARKVFDTIP-ERNTVSW 182
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKL 649
A+++SG Y E++A A W+L
Sbjct: 183 ATIISG---YAMERMAFEA----WEL 201
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 184/459 (40%), Positives = 277/459 (60%), Gaps = 7/459 (1%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKP 314
+LD + + L +A +FDEMP+R+ VSW+ ++ YNQ+ P + +F M T +P
Sbjct: 43 LLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQP 102
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAH-VLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
+ ++ +L A ASL +LR G VHA VL ++ DV + ++L+D+Y+KCG R V
Sbjct: 103 DHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDV-VKSSLVDMYAKCGLPSIARSV 161
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FDSI+ K VSW +M+ GY +G +EA ELF P RN SW+A+ISG ++
Sbjct: 162 FDSILVKTS---VSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCI 218
Query: 434 LVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+F EM G +I + SSV+ A A++A L GK +HG +I G+ +F+ AL
Sbjct: 219 DGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNAL 278
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK DI ++R VF+RM ++ +SWT ++ G A+ G AKE+++L+++M I PNE
Sbjct: 279 VDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNE 338
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+T + +++ACSH+GLV KG K F +M Y I P+ + +TC +D+LSRSG L+EAED I
Sbjct: 339 VTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIK 398
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
+MP +PD WA+LLS CK + N ++ R L L P+ YVLLSN+YA AG+W
Sbjct: 399 TMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQ 458
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
VRKLMT+ +++ G S +++ + F +P
Sbjct: 459 MSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHP 497
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 209/443 (47%), Gaps = 39/443 (8%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKP 182
L+ + K ++++ + F+ P ++ +SW + + + Q + L +F + + ++P
Sbjct: 43 LLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQP 102
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ ++++ KACA + RLG V + F V +SL+ + K G +ARSVF
Sbjct: 103 DHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVF 162
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D + + VSWT +L + G EA +F P RN SW+ +I+ QSGY +
Sbjct: 163 DSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCY 222
Query: 303 LFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F +M R + S V+ A A+L L G +H V+ G E +FISNAL+D+Y
Sbjct: 223 MFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMY 282
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KC + R VF+ ++ +D VVSW S+I G +G+ +EA +L+D
Sbjct: 283 AKCSDILAARNVFNRMLHRD---VVSWTSIIVGAAQHGRAKEALDLYD------------ 327
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-L 480
+M+L+ PN+ TF ++ A + + KG+ L +I+
Sbjct: 328 -------------------QMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDY 368
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRGLAESGYAKESINL 539
+ L T D ++SG + + + MP K +E +W ++ G + + +
Sbjct: 369 RISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRI 428
Query: 540 FEEMEKTSI-TPNELTILSVLFA 561
+ + ++ P+ +LS ++A
Sbjct: 429 ADRLLSLNMHEPSTYVLLSNVYA 451
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 191/391 (48%), Gaps = 29/391 (7%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D VV + +++ + G A+ +FD + + VSWTA++SG+ + G +E+M F R P
Sbjct: 138 DDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTP 197
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGL 204
+N+ SWTA I G VQ+G+ + +F+++ GV + + SS+ ACA + LG
Sbjct: 198 VRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGK 257
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ GL+ +G+E + + N+L+ + K ++ AR+VF+RM RDVVSWT I+ + G
Sbjct: 258 QIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHG 317
Query: 265 DLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
EA ++D+M + NEV++ +I + +G + +LF+ M Y P+ F
Sbjct: 318 RAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLF 377
Query: 320 SIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ L L+ RSG A L + + D AL+ G T+ G + D +
Sbjct: 378 TCFLDLLS-----RSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRL 432
Query: 378 VEKDVAHVVSW---NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI---------ISG 425
+ ++ ++ +++ G G QM ++L +M + +S+I +G
Sbjct: 433 LSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAG 492
Query: 426 YLEHKQFDLVFAVFN----EMLLSGEIPNKS 452
H D +F + EM G IP+ S
Sbjct: 493 ETCHPMKDEIFGLLKELDAEMRKRGYIPDTS 523
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 48/318 (15%)
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+++ YG +++A LFD MP+R+ VSW++I++ Y + K + ++F+ M + +
Sbjct: 41 NTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRL 100
Query: 449 -PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ ++++L A AS+ SL GK +H + + F D + ++L D YAK G +R
Sbjct: 101 QPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARS 160
Query: 508 VFD-------------------------------RMPDKNEISWTVMVRGLAESGYAKES 536
VFD R P +N SWT ++ GL +SGY +
Sbjct: 161 VFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDG 220
Query: 537 INLFEEMEKTSI-TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC-- 593
+F EM + + + L + SV+ AC++ ++ G + I+ + + +C
Sbjct: 221 CYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLG-------KQIHGLVIGSGYESCLF 273
Query: 594 ----VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
+VDM ++ + A + N M D +W S++ G + + A + L
Sbjct: 274 ISNALVDMYAKCSDILAARNVFNRM-LHRDVVSWTSIIVGAAQHGRAKEALDLYDQM-VL 331
Query: 650 AEEHPAGYVLLSNIYASA 667
AE P + IYA +
Sbjct: 332 AEIKPNEVTFVGLIYACS 349
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
K +H +I+K G L L D Y K ++ + +FD MP ++ +SW ++ +
Sbjct: 21 AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80
Query: 530 SGYAKESINLFEEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP-- 586
+ +++++F M T + P+ ++L AC+ L+ + + + P
Sbjct: 81 AKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLC----SLRLGKQVHARFVLSPFV 136
Query: 587 -NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + +VDM ++ G S A +S+ + S +W ++LSG
Sbjct: 137 DDDVVKSSLVDMYAKCGLPSIARSVFDSILVK-TSVSWTAMLSG 179
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 106/279 (37%), Gaps = 94/279 (33%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG +I +G +++ L+ MY +
Sbjct: 256 GKQIHGLVIGSGYESCLFISNALVDMY-------------------------------AK 284
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
++ A+ +F+ M R+ VSWT++I G +HGR +
Sbjct: 285 CSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAK------------------------ 320
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
EAL L+ +++ + +KPNEVTF + AC+ G +FKA E +
Sbjct: 321 -------EALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRK----LFKAMIEDY- 368
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
I+ SL++ +T LD+ G L EA + MP +
Sbjct: 369 -----RISPSLQL--------------------FTCFLDLLSRSGHLNEAEDLIKTMPHK 403
Query: 280 -NEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNT 316
+E +W+ +++ G E R+ R ++ +P+T
Sbjct: 404 PDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPST 442
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 315/627 (50%), Gaps = 95/627 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++ V ++N + G + +A+R+FDGMP+RN SW+ +++G+ EE
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEE--------- 202
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+F+ +L L+ E + +E +++ A + +G
Sbjct: 203 -------------------AFDLFRLMLE--ECPSEKSEFVATAVLSAVSVPLGLLMGEQ 241
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ GLI K G VSV NSL+T+ K G + A VF+ +R+ ++W
Sbjct: 242 MHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITW------------ 289
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
S MI Y Q+G + A +F QM F P F VL+A
Sbjct: 290 -------------------SAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNA 330
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L AL G H ++K+G E +++ +AL+D+Y+KCG D + FD + E D +
Sbjct: 331 SSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD---I 387
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V W +M+ G+ NG+ EEA L+ M K
Sbjct: 388 VLWTAMVSGHVQNGEHEEALTLYARMDKE------------------------------- 416
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G IP+KST +S L A A +A+LE GK LH +I+K G +G+AL+ Y+K G++E
Sbjct: 417 GIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDG 476
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF R+PD++ I+W ++ G +++G +++LFEEM+ P+ +T +++L ACSH
Sbjct: 477 MSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHM 536
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLVD+G +YF+ M Y + P HY C+VD+LSR+G L EA+DFI S+ + + W
Sbjct: 537 GLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRI 596
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+L C++ ++ + A + L +L + Y+LLSNIYAS +W D VR LM +G+
Sbjct: 597 VLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGV 656
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
K GCSWVE+ ++VH F +P+
Sbjct: 657 NKDPGCSWVELNSRVHVFVVGEQQHPE 683
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 180/372 (48%), Gaps = 48/372 (12%)
Query: 266 LGEARRIFDEMPE--RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIV 322
L A +FD++P R+ SW+ ++ ++ P +A FR M + + P+ F+
Sbjct: 65 LAAAFAVFDDIPPAARDVASWNSLLNPLSRH-RPLDALSRFRSMLSSSTVLPSPHSFAAA 123
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+A A + +G HA KI +V++ +L+++Y K G D
Sbjct: 124 FTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSD------------ 171
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
A+ +FD MP+RN SWS +++GY K + F +F
Sbjct: 172 ----------------------ARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 209
Query: 442 MLLSGEIPN-KSTF--SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
ML E P+ KS F ++VL A + L G+ +HG I+K G V + +L YAK
Sbjct: 210 ML--EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAK 267
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
+G + ++ VF+ ++N I+W+ M+ G A++G A ++++F +M TP E T + V
Sbjct: 268 AGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGV 327
Query: 559 LFACSHSGLVDKGLKYFNSMEPI-YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
L A S G + G + M + + ++ + + +VDM ++ G +++A++ + + +E
Sbjct: 328 LNASSDLGALAVGKQAHGLMVKLGFEVQIYVK--SALVDMYAKCGCIADAKEGFDQL-YE 384
Query: 618 PDSNAWASLLSG 629
D W +++SG
Sbjct: 385 VDIVLWTAMVSG 396
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 132/332 (39%), Gaps = 70/332 (21%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
S+FS F T + +L + + G+ HG ++K G + Y+ + L+ MY
Sbjct: 307 SMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMY 366
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
+ G + +A+ FD + E + V WTA++S
Sbjct: 367 -------------------------------AKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G +++G E EAL L+ ++ + G+ P++ T
Sbjct: 396 GHVQNGEHE-------------------------------EALTLYARMDKEGIIPSKST 424
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+S +ACA I G + I K G V ++L T+ K G ++ SVF R+
Sbjct: 425 IASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP 484
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV----MIARYNQSGYPEEAFR 302
RDV++W I+ F + G A +F+EM + ++ ++ + G + +
Sbjct: 485 DRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWE 544
Query: 303 LFRQMTR-YSFKP---NTSCFSIVLSALASLK 330
F MT+ Y P + +C +LS LK
Sbjct: 545 YFSLMTKDYGLTPRLDHYACMVDILSRAGMLK 576
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 144/342 (42%), Gaps = 68/342 (19%)
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
R G +HA LK G ++N+LI+ YS
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRP------------------------- 63
Query: 393 GGYGLNGQMEEAKELFDNMPK--RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-P 449
+ A +FD++P R+ SW+++++ H+ D + F ML S + P
Sbjct: 64 -------LLAAAFAVFDDIPPAARDVASWNSLLNPLSRHRPLD-ALSRFRSMLSSSTVLP 115
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY-DVFLGTALTDTYAKSGDIESSRRV 508
+ +F++ A+A AS G H K+ +V++ T+L + Y K G + +RR+
Sbjct: 116 SPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRM 175
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACS---- 563
FD MP +N SW+ MV G A ++E+ +LF M E+ +E +VL A S
Sbjct: 176 FDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLG 235
Query: 564 -------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
H +V GL F S+E +V M +++G + A S
Sbjct: 236 LLMGEQMHGLIVKDGLLDFVSVE------------NSLVTMYAKAGCMGAAFHVFES-SR 282
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
E +S W+++++G Y A+ AV ++ H AG+
Sbjct: 283 ERNSITWSAMITG---YAQNGEADSAVS---MFSQMHAAGFT 318
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 308/592 (52%), Gaps = 66/592 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF-LKLLESGV 180
T+L++ + K G V ++ F+ P +N SW+ + G+ S EA LF L L E
Sbjct: 51 TSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPS 110
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ +E +++ A + +G + GLI K G VSV NSL+T+
Sbjct: 111 EKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM------------ 158
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ + G +G A +F+ ERN ++WS MI Y Q+G + A
Sbjct: 159 -------------------YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSA 199
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+F QM F P F VL+A + L AL G H ++K+G E +++ +AL+D+
Sbjct: 200 VSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDM 259
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG D AKE FD + + + V W+
Sbjct: 260 YAKCGCIAD----------------------------------AKEGFDQLYEVDIVLWT 285
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A++SG++++ + + ++ M G IP+KST +S L A A +A+LE GK LH +I+K
Sbjct: 286 AMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKY 345
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G +G+AL+ Y+K G++E VF R+PD++ I+W ++ G +++G +++LF
Sbjct: 346 GLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLF 405
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EEM+ P+ +T +++L ACSH GLVD+G +YF+ M Y + P HY C+VD+LSR
Sbjct: 406 EEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSR 465
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G L EA+DFI S+ + + W +L C++ ++ + A + L +L + Y+LL
Sbjct: 466 AGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILL 525
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SNIYAS +W D VR LM +G+ K GCSWVE+ ++VH F +P+
Sbjct: 526 SNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPE 577
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 191/413 (46%), Gaps = 68/413 (16%)
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+V VC SL+ + K+G V AR VFD M +
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQ------------------------------ 75
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS-CFSIVLSALASLKALRSGM 336
RN SWS M+A Y EEAF LFR M + + VLSA++ L G
Sbjct: 76 -RNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGE 134
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H ++K G+ V + N+L+ +Y+K G VF+S E++ ++W++MI GY
Sbjct: 135 QMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN---SITWSAMITGYA 191
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
NG+ + A ++F++M +G P + TF
Sbjct: 192 QNGEADSA-------------------------------VSMFSQMHAAGFTPTEFTFVG 220
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL AS+ + +L GK HG ++KLGF +++ +AL D YAK G I ++ FD++ + +
Sbjct: 221 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 280
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+ WT MV G ++G +E++ L+ M+K I P++ TI S L AC+ ++ G K +
Sbjct: 281 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPG-KQLH 339
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ Y + + + M S+ G L + +P + D AW S++SG
Sbjct: 340 TQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIISG 391
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 140/256 (54%), Gaps = 9/256 (3%)
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ V++V S++ Y G + +A+ +FD MP+RN SWS +++GY K + F
Sbjct: 40 IPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFD 99
Query: 438 VFNEMLLSGEIPN-KSTF--SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F ML E P+ KS F ++VL A + L G+ +HG I+K G V + +L
Sbjct: 100 LFRLML--EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVT 157
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK+G + ++ VF+ ++N I+W+ M+ G A++G A ++++F +M TP E T
Sbjct: 158 MYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFT 217
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPI-YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
+ VL A S G + G + M + + ++ + + +VDM ++ G +++A++ +
Sbjct: 218 FVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK--SALVDMYAKCGCIADAKEGFDQ 275
Query: 614 MPFEPDSNAWASLLSG 629
+ +E D W +++SG
Sbjct: 276 L-YEVDIVLWTAMVSG 290
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 132/332 (39%), Gaps = 70/332 (21%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
S+FS F T + +L + + G+ HG ++K G + Y+ + L+ MY
Sbjct: 201 SMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMY 260
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
+ G + +A+ FD + E + V WTA++S
Sbjct: 261 -------------------------------AKCGCIADAKEGFDQLYEVDIVLWTAMVS 289
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G +++G E EAL L+ ++ + G+ P++ T
Sbjct: 290 GHVQNGEHE-------------------------------EALTLYARMDKEGIIPSKST 318
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+S +ACA I G + I K G V ++L T+ K G ++ SVF R+
Sbjct: 319 IASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP 378
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV----MIARYNQSGYPEEAFR 302
RDV++W I+ F + G A +F+EM + ++ ++ + G + +
Sbjct: 379 DRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWE 438
Query: 303 LFRQMTR-YSFKP---NTSCFSIVLSALASLK 330
F MT+ Y P + +C +LS LK
Sbjct: 439 YFSLMTKDYGLTPRLDHYACMVDILSRAGMLK 470
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM- 543
+V++ T+L + Y K G + +RRVFD MP +N SW+ MV G A ++E+ +LF M
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 544 EKTSITPNELTILSVLFACS-----------HSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
E+ +E +VL A S H +V GL F S+E
Sbjct: 106 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE------------N 153
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
+V M +++G + A S E +S W+++++G Y A+ AV ++
Sbjct: 154 SLVTMYAKAGCMGAAFHVFES-SRERNSITWSAMITG---YAQNGEADSAVS---MFSQM 206
Query: 653 HPAGYV 658
H AG+
Sbjct: 207 HAAGFT 212
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 184/480 (38%), Positives = 266/480 (55%), Gaps = 34/480 (7%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G + A ++F + E + W+ MI QS P A L+ QM +P+ F VL
Sbjct: 61 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 120
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A L ++ G VH V ++G E + F+ N LI ++ CG+ R +FD ++DV
Sbjct: 121 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 180
Query: 384 ----------------------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+VSWN MI GY G+ME A++LFD +PKR+
Sbjct: 181 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 240
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
V+W+A+I+GY+ +F EM GE+P++ T S+L A + L+ G+ +H
Sbjct: 241 VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC 300
Query: 476 KIIKLGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
I ++GF V LG AL D YAK G I + VF M +K+ +W ++ GLA G+A+
Sbjct: 301 CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAE 360
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
+SI+LF EM K I P+E+T + VL ACSH+G V++G +YF+ M YNI+PN RHY C+
Sbjct: 361 KSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCM 420
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L R+G L+EA DFI++M EP++ W +LL C+ + N ++ RA L K+ +
Sbjct: 421 VDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDES 480
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ--VHFFFQKTDHNPK 712
YVLLSNIYAS G W VRKLM + G+RK GCS +E N+ +HF F D PK
Sbjct: 481 GDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFLF---DSKPK 537
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 196/459 (42%), Gaps = 109/459 (23%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W I G Q+ A+ L+ ++ V+P++ TF + KAC + ++G V G +F
Sbjct: 81 WNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVF 140
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ GFE + V N+LI G++ +AR++FD KRDVV+W+ + + G+LG AR+
Sbjct: 141 RLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQ 200
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPE-------------------------------EA 300
+FDEMP ++ VSW+VMI Y + G E +A
Sbjct: 201 LFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQA 260
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNALID 359
+F +M P+ +LSA L L +G +H + ++G V + NALID
Sbjct: 261 LEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALID 320
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG VF + EKDV+ +WNS++GG +G E++ LF M K
Sbjct: 321 MYAKCGSIVRALEVFQGMREKDVS---TWNSVLGGLAFHGHAEKSIHLFTEMRK------ 371
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
L+ + P++ TF VL A + +E+G
Sbjct: 372 -------LKIR------------------PDEITFVGVLVACSHAGRVEEG--------- 397
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAK 534
R+ FD M D+ I + MV L +G
Sbjct: 398 --------------------------RQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLN 431
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
E+ + + M+ I PN + ++L AC G V+ G +
Sbjct: 432 EAFDFIDTMK---IEPNAIVWRTLLGACRIHGNVELGRR 467
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK T V G +HG + + G ++ L+ + A + D
Sbjct: 119 VLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRD 178
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + + + G L A++LFD MP ++ VSW +I+G+ K G +E + F+ P
Sbjct: 179 VVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPK 238
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V++W A I G+V G + +AL++F ++ G P+EVT S+ AC ++ D G +
Sbjct: 239 RDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRI 298
Query: 207 FGLIFKAGFEK-HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
I + GF V + N+LI + K G + A VF M ++DV +W +L G
Sbjct: 299 HCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGH 358
Query: 266 LGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFS 320
++ +F EM + +E+++ ++ + +G EE + F M Y+ +PN +
Sbjct: 359 AEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYG 418
Query: 321 IVLSALA 327
++ L
Sbjct: 419 CMVDLLG 425
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 303/545 (55%), Gaps = 39/545 (7%)
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I FV++G A+ LF +L E GV P+ T+ + K I + R G V + K G
Sbjct: 80 IKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGL 139
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
E VCNS +D++ E+G + ++F+E
Sbjct: 140 EFDPYVCNSF-------------------------------MDMYAELGLVEGFTQVFEE 168
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRS 334
MP+R+ VSW++MI+ Y + EEA ++R+M T + KPN + LSA A L+ L
Sbjct: 169 MPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLEL 228
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +H ++ ++ + NAL+D+Y KCG R +FD++ K+V W SM+ G
Sbjct: 229 GKEIHDYIAS-ELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVN---CWTSMVTG 284
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y + GQ+++A+ LF+ P R+ V W+A+I+GY++ +F+ A+F EM + G P+K
Sbjct: 285 YVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIV 344
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
++L A +LE+GK +H I + D +GTAL + YAK G IE S +F+ + +
Sbjct: 345 VTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKE 404
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
K+ SWT ++ GLA +G E++ LF+ M+ + P+++T ++VL ACSH+GLV++G K
Sbjct: 405 KDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKL 464
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS---NAWASLLSGCK 631
F+SM +Y+I+PN HY C +D+L R+G L EAE+ + +P + + + +LLS C+
Sbjct: 465 FHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACR 524
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
TY N + ER L K+ + + LL++IYASA RW D VR M + G++K G
Sbjct: 525 TYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGY 584
Query: 692 SWVEV 696
S +EV
Sbjct: 585 SAIEV 589
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 255/576 (44%), Gaps = 94/576 (16%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE----ANEI 78
T + LLK S + Q + + H+ G+ ++R +L+ + S SL AN I
Sbjct: 10 TYISLLKSCKSMS---QLKQIQAHIFCVGLQQDRDTLNKLMAFSMDS--SLGDFNYANRI 64
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISG------- 127
++ L ++N MI A ++ G+ A LF + E + ++ ++ G
Sbjct: 65 FNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEV 124
Query: 128 ----------------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+ + G VE FE P ++ +SW I G+
Sbjct: 125 REGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGY 184
Query: 160 VQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
V+ EA+ ++ ++ ES KPNE T S ACA + + LG + I + +
Sbjct: 185 VRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYI-ASELDLT 243
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ N+L+ + K G V +AR +FD M ++V WT ++ ++ G L +AR +F+ P
Sbjct: 244 TIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPS 303
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
R+ V W+ MI Y Q EE LF +M KP+ +L+ A AL G +
Sbjct: 304 RDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWI 363
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H ++ + I+ D + ALI++Y+KCG + +F+ + EKD SW S+I G +N
Sbjct: 364 HNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKD---TTSWTSIICGLAMN 420
Query: 399 GQMEEAKELFDNMP----KRNDVSWSAIIS-----GYLE-------------HKQFDLV- 435
G+ EA ELF M K +D+++ A++S G +E H + +L
Sbjct: 421 GKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEH 480
Query: 436 FAVFNEML-----------LSGEIPNKST------FSSVLCASASVASLEKGKDLHGKII 478
+ F ++L L ++P ++ + ++L A + +++ G+ L +
Sbjct: 481 YGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALA 540
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
K+ D L T L YA + E R+V ++M D
Sbjct: 541 KVK-SSDSSLHTLLASIYASADRWEDVRKVRNKMKD 575
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 193/415 (46%), Gaps = 67/415 (16%)
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
+ RD ++ + + +GD A RIF+ + + + +++MI + +SG A LF+
Sbjct: 38 QDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQ 97
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
Q+ + P+ + VL + + +R G VHA V+K G+E D ++ N+ +D+Y++ G
Sbjct: 98 QLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELG 157
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ VF+ + ++D VSWN MI GY + EEA +++ M W+
Sbjct: 158 LVEGFTQVFEEMPDRD---AVSWNIMISGYVRCKRFEEAVDVYRRM-------WTE---- 203
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
S E PN++T S L A A + +LE GK++H I
Sbjct: 204 -------------------SNEKPNEATVVSTLSACAVLRNLELGKEIHDYIAS-ELDLT 243
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRM-------------------------------PD 514
+G AL D Y K G + +R +FD M P
Sbjct: 244 TIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPS 303
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ + WT M+ G + +E+I LF EM+ + P++ ++++L C+ SG +++G K+
Sbjct: 304 RDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQG-KW 362
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ IK + T +++M ++ G + ++ + N + E D+ +W S++ G
Sbjct: 363 IHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLK-EKDTTSWTSIICG 416
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 309/573 (53%), Gaps = 41/573 (7%)
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
+F+ F + A +C G EA + FL E +P FS++ +AC +
Sbjct: 32 HFQNGRFSDGNEQFATLCS---KGHIREAFESFLS--EIWAEPR--LFSNLLQACIPLKS 84
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG + LIF +G + N L+ L K GE+ A ++FDRM +R+++S +++
Sbjct: 85 VSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKA 144
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
++ MG+L A+ +FDEMP+RN +W+ M+ + EEA LF +M SF P+
Sbjct: 145 YLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSL 204
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
VL A L AL +G VHA+V+K G E ++ + +L +Y K G DG
Sbjct: 205 GSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGE-------- 256
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
V++W MP + V+W+ ++SG + F+ V +
Sbjct: 257 ----RVINW----------------------MPDCSLVAWNTLMSGKAQKGYFEGVLDQY 290
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M ++G P+K TF SV+ + + +A L +GK +H + +K G +V + ++L Y++
Sbjct: 291 CMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRC 350
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G ++ S + F +++ + W+ M+ G +E+I LF EME+ ++ NE+T LS+L
Sbjct: 351 GCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLL 410
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
+ACSH GL DKGL F+ M Y +K +HYTC+VD+L RSG L EAE I SMP + D
Sbjct: 411 YACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKAD 470
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ W +LLS CK +KN +IA R + ++ + A YVLL+NIY+SA RW + VR+
Sbjct: 471 AIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRA 530
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
M +K ++K G SWVEV+NQVH F + +PK
Sbjct: 531 MKDKMVKKEPGISWVEVKNQVHQFHMGDECHPK 563
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 198/441 (44%), Gaps = 67/441 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D + N ++N ++G L+ A LFD MP RN +S +I ++ G +E + F+ P
Sbjct: 103 DKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMP 162
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV +W A + G + + EAL LF ++ E P+E + S+ + CA + G
Sbjct: 163 DRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQ 222
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V + K GFE CN ++ SL ++++ G
Sbjct: 223 VHAYVMKCGFE-----CNLVVGCSLA--------------------------HMYMKAGS 251
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ + R+ + MP+ + V+W+ +++ Q GY E + M F+P+ F V+S+
Sbjct: 252 MHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISS 311
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L L G +HA +K G +V + ++L+ +YS+CG +D F E+D V
Sbjct: 312 CSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERD---V 368
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V W+SMI YG +GQ EEA +LF+ M + N L
Sbjct: 369 VLWSSMIAAYGFHGQGEEAIKLFNEMEQEN----------------------------LP 400
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIES 504
G N+ TF S+L A + +KG L ++ K G + T L D +SG +E
Sbjct: 401 G---NEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEE 457
Query: 505 SRRVFDRMPDK-NEISWTVMV 524
+ + MP K + I W ++
Sbjct: 458 AEAMIRSMPVKADAIIWKTLL 478
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 137/317 (43%), Gaps = 17/317 (5%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E N V +L +MK G + + P ++++W + G Q G+ L +
Sbjct: 233 ECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCM 292
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ +G +P+++TF S+ +C+E+ G + KAG VSV +SL+++ + G
Sbjct: 293 MKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGC 352
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIAR 290
+ + F ++RDVV W+ ++ + G EA ++F+EM + NE+++ ++
Sbjct: 353 LQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYA 412
Query: 291 YNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGM--HVHAHVLKIGI 347
+ G ++ LF M +Y K ++ ++ L RSG A + + +
Sbjct: 413 CSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLG-----RSGCLEEAEAMIRSMPV 467
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE- 406
+ D I L+ + R V D ++ D S+ + Y + + E
Sbjct: 468 KADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEV 527
Query: 407 ---LFDNMPKRND-VSW 419
+ D M K+ +SW
Sbjct: 528 RRAMKDKMVKKEPGISW 544
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 197/590 (33%), Positives = 309/590 (52%), Gaps = 79/590 (13%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
W A I +V GF F+AL++F ++ SG P++ TF + KAC+ ++ +G+ + G
Sbjct: 151 WNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRA 210
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+GF ++ V NSL+ + + G+V G AR
Sbjct: 211 LVSGFSSNMFVQNSLLAMYMNCGKV-------------------------------GLAR 239
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
++F+ M +R+ VSW+ MI+ + Q+G PEEA +F M +P+++ L + LK
Sbjct: 240 QVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLK 299
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
L G+ VH V K +++ + + NAL+D+YS+CG + LVF EKDV ++W S
Sbjct: 300 ELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDV---ITWTS 356
Query: 391 MIGGYGLNGQMEEAKEL------------------------------------------F 408
MI GY +NG + A L F
Sbjct: 357 MINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQVF 416
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
K+ V W+A++SG + ++ +F ML+ N +TF+SV+ A A +A L+
Sbjct: 417 AKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLK 476
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE--ISWTVMVRG 526
+ +LH +++ GF + + T L D Y+K G ++ + ++FD +P+K + I W+V++ G
Sbjct: 477 QVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAG 536
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
G+ + ++ LF +M + + PNE+T SVL ACSH GLVD GL F M Y P
Sbjct: 537 YGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSP 596
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
HYTCVVD+L R+GRL EA D I SMPF+ + + W +LL C ++N ++ E A + L
Sbjct: 597 LPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERL 656
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEV 696
++L E Y+LL+NIYA+ GRW DA NVR +M++ GLRK+ S V V
Sbjct: 657 FELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSVGV 706
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 136/603 (22%), Positives = 253/603 (41%), Gaps = 121/603 (20%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGI-HKERY--LTTRLLIMY 66
+++ S + + C LL+ + + + + LHGH I +G+ H + L + L + Y
Sbjct: 68 ALSKSKSLIANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSY 127
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM-------PERNE- 118
A ++ DL+ L + N +I + G +A R+FD M P++
Sbjct: 128 AFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTF 187
Query: 119 ------------------VSWTALISGF--------------MKHGRVEESMWYFERNPF 146
+ AL+SGF M G+V + F
Sbjct: 188 PLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLK 247
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW I G+ QNG EAL +F ++++ V+P+ T S +C + + LG+ V
Sbjct: 248 RSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKV 307
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
L+ K ++ + V N+L+ + + G +D A VF +++DV++WT +++ +I G+
Sbjct: 308 HKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNA 367
Query: 267 GEAR------------------------------------------RIFDEMPERNEVSW 284
A ++F + ++ V W
Sbjct: 368 KSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQVFAKTSKKRTVPW 427
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ +++ + EA LF+ M + N + F+ V+ A A L L+ M++H+++++
Sbjct: 428 NALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVR 487
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
G + + LID+YSKCG +FD I K+ ++ W+ +I GYG++G E A
Sbjct: 488 SGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKE-KDIIVWSVLIAGYGMHGHGETA 546
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
L FN+M+ SG PN+ TF+SVL A +
Sbjct: 547 VLL-------------------------------FNQMVHSGMQPNEITFTSVLHACSHR 575
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESSRRVFDRMP-DKNEISWT 521
++ G L +I+ +P T + D ++G ++ + + MP +N W
Sbjct: 576 GLVDDGLTLFKYMIE-NYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWG 634
Query: 522 VMV 524
++
Sbjct: 635 ALL 637
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 144/296 (48%), Gaps = 35/296 (11%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALA 327
AR++FD++ + + W+ +I Y G+ +A R+F M F P+ F +V+ A +
Sbjct: 136 ARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACS 195
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+ L G+ +H L G ++F+ N+L+ +Y CG+ R VF+ ++++ VVS
Sbjct: 196 VMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRS---VVS 252
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN+MI G+ NG+ EEA AVFN M+ +
Sbjct: 253 WNTMISGWFQNGRPEEA-------------------------------LAVFNSMMDARV 281
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ +T S L + + LE G +H + K + + AL D Y++ G I+ +
Sbjct: 282 EPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASL 341
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
VF +K+ I+WT M+ G +G AK ++ L M+ + PN +T+ S+L AC+
Sbjct: 342 VFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACA 397
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK-QFDLVFAVFNEMLLSGEI-PNKS 452
Y G + A++LFD++ + W+AII Y++ FD VF+ M+ SG+ P+K
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFD-ALRVFDSMICSGKFWPDKY 185
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
TF V+ A + ++ L G +HG+ + GF ++F+ +L Y G + +R+VF+ M
Sbjct: 186 TFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVM 245
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
++ +SW M+ G ++G +E++ +F M + P+ TI+S L +C + ++ G+
Sbjct: 246 LKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGI 305
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
K ++ +++ +VDM SR G + EA + + E D W S+++G
Sbjct: 306 KVHKLVQK-NHLQEKIEVRNALVDMYSRCGGIDEAS-LVFAETKEKDVITWTSMING 360
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 96/238 (40%), Gaps = 37/238 (15%)
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF---PYDVFLGTALTDTYAKSGDIES 504
I N S+L A+ SL K K LHG I G P + L + L +YA G +
Sbjct: 76 IANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPL 135
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACS 563
+R++FD + D + W +++ + G+ +++ +F+ M + P++ T V+ ACS
Sbjct: 136 ARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACS 195
Query: 564 HSGLVDKGLKYF---------------NSMEPIY-NIKPNGRHYTCVVDMLSRS------ 601
+++ G+ NS+ +Y N G ML RS
Sbjct: 196 VMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNT 255
Query: 602 --------GRLSEAEDFINSM---PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
GR EA NSM EPDS S L C K ++ + K + K
Sbjct: 256 MISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQK 313
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 299/583 (51%), Gaps = 66/583 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T LI + G EE+ F+ P ++VI+WT+ I G+ A +F +L GVK
Sbjct: 45 TDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVK 104
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE-KHVSVCNSLITLSLKMGEVDLARS 240
PN T S++ KAC + G V GL K G + + V N+L+ D+ +
Sbjct: 105 PNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALM---------DMYAT 155
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
D M+ AR +F+++ +N VSW+ +I Y
Sbjct: 156 CCDSMDN---------------------ARLVFEDIGTKNAVSWTTLITGYTHRRDAFGG 194
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
R+FRQM + + FSI +SA AS+ + G VHA V+ G E ++ + NA++D+
Sbjct: 195 LRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDM 254
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y +C EAK+LF M +++ ++W+
Sbjct: 255 YCRCRCA----------------------------------SEAKQLFGEMTQKDTITWN 280
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+I+G+ ++ +F++M+ G PN TF+SV+ A A++A L G+ LHG II
Sbjct: 281 TLIAGFETLDSYE-SLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR 339
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G ++ L AL D YAK G++ S ++F M N +SWT M+ G G+ KE+++LF
Sbjct: 340 GLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLF 399
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EM + I P+++ ++VL ACSH+GLVD+GL+YF M YN+ P+ Y CVVD+LSR
Sbjct: 400 NEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSR 459
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+GR+ EA + I +MPF+PD + W +LL CK YK I + A + ++ YVLL
Sbjct: 460 AGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLL 519
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
SN A+ G W D ++RKLM +K G SW+E++NQV F
Sbjct: 520 SNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSF 562
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 132/552 (23%), Positives = 221/552 (40%), Gaps = 156/552 (28%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK---HGRVEE 136
KDL G +I + G+ EEA LFD MP R+ ++WT++I+G+ H R
Sbjct: 38 KDLTGLTTD----LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSR--- 90
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
A +F +L GVKPN T S++ KAC
Sbjct: 91 -------------------------------AWNVFTNMLRDGVKPNAFTVSAVLKACKS 119
Query: 197 INDFRLGLSVFGLIFKAGFE-KHVSVCNSLITLSLKMGE-VDLARSVFDRMEKRDVVSWT 254
+ G V GL K G + + V N+L+ + + +D AR VF+ + ++ VSWT
Sbjct: 120 LKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWT 179
Query: 255 VILDVFIE----MGDLGEARRIFDEMPERNEVSWSVMIAR-------------------- 290
++ + G L R++F E E + S+S+ ++
Sbjct: 180 TLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINH 239
Query: 291 ---------------YNQSGYPEEAFRLFRQMTRY------------------------- 310
Y + EA +LF +MT+
Sbjct: 240 GFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSYESLCIFS 299
Query: 311 -----SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
F PN F+ V++A A+L L G +H ++ G++ ++ +SNALID+Y+KCG
Sbjct: 300 QMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCG 359
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
D +F + + +VSW SM+ GYG +G +EA +L
Sbjct: 360 NVADSHKIFSGMRHTN---LVSWTSMMIGYGAHGHGKEAVDL------------------ 398
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY- 484
FNEM+ SG P+K F +VL A + +++G + +L Y
Sbjct: 399 -------------FNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGL----RYFRLMTSYY 441
Query: 485 ----DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D + + D +++G ++ + + + MP K + S V + G + Y + SI
Sbjct: 442 NVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKK-YKQPSIQKL 500
Query: 541 EEMEKTSITPNE 552
++ + PN+
Sbjct: 501 AALKVLEMKPNK 512
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
L T L +Y G E + +FD MP ++ I+WT M+ G + + N+F M +
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 548 ITPNELTILSVLFAC 562
+ PN T+ +VL AC
Sbjct: 103 VKPNAFTVSAVLKAC 117
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 206/724 (28%), Positives = 351/724 (48%), Gaps = 104/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
++K + + GR +H G+ + ++ + L+ MY +A ++ + D
Sbjct: 152 VVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERD 211
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERN------------EVSWT------------ 122
V+ N M++ ++ G++ A LF M VS T
Sbjct: 212 CVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT 271
Query: 123 ---------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
L+S + K +++ F P ++++W I G VQNGF +
Sbjct: 272 LAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQ 331
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL LF + +SG++P+ VT S+ A ++N F G + G I + V + ++L+
Sbjct: 332 ALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVD 391
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K V +A+SV+D + DVV +G S M
Sbjct: 392 IYFKCRAVRMAQSVYDSSKAIDVV--------------IG-----------------STM 420
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y +G +EA ++FR + +PN + VL A AS+ A++ G +H++ LK
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E ++ +AL+D+Y+KCG D++H +
Sbjct: 481 EGRCYVESALMDMYAKCGRL-------------DLSHYI--------------------- 506
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F + +++V+W+++IS + ++ + + +F EM + G + T SSVL A AS+ ++
Sbjct: 507 FSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAI 566
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
GK++HG +IK D+F +AL D Y K G++E + RVF+ MP+KNE+SW ++
Sbjct: 567 YYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASY 626
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
G KES++L M++ + +T L+++ AC+H+G V +GL+ F M Y I P
Sbjct: 627 GAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPR 686
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
H+ C+VD+ SR+G+L +A + I MPF+PD+ W +LL C+ ++N ++AE A + L+
Sbjct: 687 MEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELF 746
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
KL + YVL+SNI A AGRW VR+LM + ++K G SWV+V N H F
Sbjct: 747 KLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAAD 806
Query: 708 DHNP 711
+P
Sbjct: 807 KSHP 810
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 225/514 (43%), Gaps = 81/514 (15%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C L +++ + G LH +K G+ E + L+ MY + + ++ +
Sbjct: 249 TLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLM 308
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE--------------------------- 115
DLV N MI+ +Q G +++A LF M +
Sbjct: 309 PRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGK 368
Query: 116 -------RNEVSW-----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
RN V +AL+ + K V + ++ + +V+ + I G+V NG
Sbjct: 369 ELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNG 428
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
S EA+K+F LLE G++PN V +S+ ACA + +LG + K +E V +
Sbjct: 429 MSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L+ + K G +DL+ +F ++ +D V+W ++ F + G+
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGE------------------ 530
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
PEEA LFR+M K + S VLSA ASL A+ G +H V+
Sbjct: 531 -------------PEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVI 577
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K I D+F +ALID+Y KCG + VF+S+ EK+ VSWNS+I YG G ++E
Sbjct: 578 KGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKN---EVSWNSIIASYGAYGLVKE 634
Query: 404 AKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+ L +M K + V++ A++S Q +F M +I P F+ ++
Sbjct: 635 SVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMV 694
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+ L+K +L I+ + F D + AL
Sbjct: 695 DLYSRAGKLDKAMEL---IVDMPFKPDAGIWGAL 725
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/550 (25%), Positives = 237/550 (43%), Gaps = 80/550 (14%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE---RN 144
V+ C+ +++ G + + G+ + T L+ ++ R +++ F R
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLL--ESGVKPNEVTFSSICKACAEINDFRL 202
+ W I G G AL +LK+ S P+ TF + K+CA + L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V G + + V ++LI + G + AR VFD M +RD V W V++D +++
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + A +F +M SG +PN + +
Sbjct: 225 AGSVSSAVELFGDM---------------RASG----------------CEPNFATLACF 253
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LS A+ L G+ +H +K G+E +V ++N L+ +Y+KC DG +F + D
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDD- 312
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+V+WN MI G NG +++A LF +M K
Sbjct: 313 --LVTWNGMISGCVQNGFVDQALLLFCDMQK----------------------------- 341
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
SG P+ T S+L A + +GK+LHG I++ DVFL +AL D Y K +
Sbjct: 342 --SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
++ V+D + + + M+ G +G ++E++ +F + + I PN + I SVL AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKP--NGRHY--TCVVDMLSRSGRLSEAEDFINSMPFEP 618
+ + G + + Y +K GR Y + ++DM ++ GRL + +I S
Sbjct: 460 ASMAAMKLGQELHS-----YALKNAYEGRCYVESALMDMYAKCGRL-DLSHYIFSKISAK 513
Query: 619 DSNAWASLLS 628
D W S++S
Sbjct: 514 DEVTWNSMIS 523
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 129/310 (41%), Gaps = 32/310 (10%)
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VL S L G+ VH + G+ D + L+ +Y +D VF S+
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
A + WN +I G + G A + M W+ H
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKM-------WA--------HP---------- 139
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
S +P+ TF V+ + A++ ++ G+ +H LG D+F+G+AL YA G
Sbjct: 140 ----SAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGG 195
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+ +R+VFD M +++ + W VM+ G ++G ++ LF +M + PN T+ L
Sbjct: 196 LLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLS 255
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
+ + G++ +++ Y ++ +V M ++ L + MP + D
Sbjct: 256 VSATESDLFFGVQ-LHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DL 313
Query: 621 NAWASLLSGC 630
W ++SGC
Sbjct: 314 VTWNGMISGC 323
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/622 (31%), Positives = 313/622 (50%), Gaps = 69/622 (11%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
++ A + G+ AQ+LFD +P+ + + + LIS F
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAF------------------------ 107
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
G EA++L+ L G+KP+ F ++ KAC D V +
Sbjct: 108 -------TTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIR 160
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
G + N+LI K V+ ARR+
Sbjct: 161 CGMMSDAFLGNALIHAYGKCKCVE-------------------------------GARRV 189
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
FD++ ++ VSW+ M + Y G P +F +M KPN+ S +L A + LK L
Sbjct: 190 FDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDL 249
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
+SG +H ++ G+ ++VF+ +AL+ LY++C K RLVFD + +DV VSWN ++
Sbjct: 250 KSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDV---VSWNGVL 306
Query: 393 GGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
Y N + ++ LF M + ++ +W+A+I G +E+ Q + + +M G
Sbjct: 307 TAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFK 366
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN+ T SS L A + + SL GK++H + + D+ TAL YAK GD+ SR V
Sbjct: 367 PNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNV 426
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD + K+ ++W M+ A G +E + LFE M ++ I PN +T VL CSHS LV
Sbjct: 427 FDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLV 486
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++GL+ FNSM + ++P+ HY C+VD+ SR+GRL EA +FI MP EP ++AW +LL
Sbjct: 487 EEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLG 546
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ YKN ++A+ + L+++ +P YV L NI +A W +A R LM E+G+ K+
Sbjct: 547 ACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKT 606
Query: 689 GGCSWVEVRNQVHFFFQKTDHN 710
GCSW++V ++VH F +N
Sbjct: 607 PGCSWLQVGDRVHTFVVGDKNN 628
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 210/432 (48%), Gaps = 46/432 (10%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGI--HKERYLTTRLLIMYLG--SRKSLEANEI 78
TC L+ T++ L + L+ L GI H +LT G SR ++
Sbjct: 99 TCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDA 158
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
++ D + N +I+A + +E A+R+FD + ++ VSWT++ S ++
Sbjct: 159 IRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVN-------- 210
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
CG + G L +F ++ +GVKPN VT SSI AC+E+
Sbjct: 211 ------------------CGLPRLG-----LAVFCEMGWNGVKPNSVTLSSILPACSELK 247
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
D + G ++ G + G ++V VC++L++L + V AR VFD M RDVVSW +L
Sbjct: 248 DLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLT 307
Query: 259 VFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+ + + +F +M E +E +W+ +I ++G E+A + R+M FKP
Sbjct: 308 AYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKP 367
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N S L A + L++LR G VH +V + + D+ AL+ +Y+KCG+ R VF
Sbjct: 368 NQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVF 427
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHK 430
D I KD VV+WN+MI ++G E LF++M K N V+++ ++SG +
Sbjct: 428 DMICRKD---VVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSR 484
Query: 431 QFDLVFAVFNEM 442
+ +FN M
Sbjct: 485 LVEEGLQIFNSM 496
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%)
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
LG L GD ++++FD +P + + + ++ G E+I L+ +
Sbjct: 68 LGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG 127
Query: 548 ITPNELTILSVLFACSHSG 566
I P+ L+V AC SG
Sbjct: 128 IKPHNSVFLTVAKACGASG 146
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 214/745 (28%), Positives = 365/745 (48%), Gaps = 117/745 (15%)
Query: 11 INPE--TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKER-YLTTRLLIMYL 67
++P+ +SFNS ++ T Q + +GRALH +IK YL L+ Y
Sbjct: 3 LHPQNLSSFNSLVQ--------FTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYA 54
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN------LEEAQRL-----------F 110
+A + ++ D++ NC+IN Q G +E QR+ F
Sbjct: 55 KCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTF 114
Query: 111 DGM-------------PERNEVS-----------WTALISGFMKHGRVEESMWYFERNPF 146
G+ + + V+ ++L++ + K G + E+ F+R P
Sbjct: 115 SGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPE 174
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N ++W I G+ + EA ++F + NE F+S+ A A G +
Sbjct: 175 RNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQI 234
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
L K G +S+ N+L+T+ K G +D
Sbjct: 235 HCLAVKTGLLVFLSILNALVTMYAKCGSLD------------------------------ 264
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
++ ++F+ ++N ++WS MI Y QSG +A +LF +M P+ VL+A
Sbjct: 265 -DSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNAC 323
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ A+ G VH ++LK+G E ++I AL+D+Y+K G T+D
Sbjct: 324 SDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTED----------------- 366
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
A++ F+ + + + V W+++I+GY+++ + + +++ M + G
Sbjct: 367 -----------------ARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEG 409
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
+PN+ T +SVL A +++A+ ++G+ +H + IK G +V +G+AL+ YAK G++E
Sbjct: 410 ILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGN 469
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
VF RMP+++ ISW M+ GL+++GY KE++ LFEEM + P+++T ++VL ACSH G
Sbjct: 470 IVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMG 529
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LVD G YF M + + P HY C+VD+LSR+G+L EA++FI S + W L
Sbjct: 530 LVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRIL 589
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L C+ Y+N ++ A + L +L + + YVLLS IY + GR D VR +M +G+
Sbjct: 590 LGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVS 649
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNP 711
K GCSW+E+++ VH F +P
Sbjct: 650 KEPGCSWIELKSNVHVFVVGDQMHP 674
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 315/627 (50%), Gaps = 95/627 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++ V ++N + G + +A+R+FDGMP+RN SW+ +++G+ EE
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEE--------- 202
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+F+ +L L+ E + +E +++ A + +G
Sbjct: 203 -------------------AFDLFRLMLE--ECPSEKSEFVATAVLSAVSVPLGLLMGEQ 241
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ GLI K G VSV NSL+T+ K G + A VF+ +R+ ++W
Sbjct: 242 MHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITW------------ 289
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
S MI Y Q+G + A +F QM F P F VL+A
Sbjct: 290 -------------------SAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNA 330
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L AL G H ++K+G E +++ +AL+D+Y+KCG D + FD + E D +
Sbjct: 331 SSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD---I 387
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V W +M+ G+ NG+ EEA L+ M K
Sbjct: 388 VLWTAMVSGHVQNGEHEEALTLYARMDKE------------------------------- 416
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G IP+KST +S L A A +A+LE GK LH +I+K G +G+AL+ Y+K G++E
Sbjct: 417 GIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDG 476
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF R+PD++ I+W ++ G +++G +++LFEEM+ P+ +T +++L ACSH
Sbjct: 477 MSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHM 536
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLVD+G +YF+ M Y + P HY C+VD+LSR+G L EA+DFI S+ + + W
Sbjct: 537 GLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRI 596
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+L C++ ++ + A + L +L + Y+LLSNIYAS +W D VR LM +G+
Sbjct: 597 VLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGV 656
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
K GCSWVE+ ++VH F +P+
Sbjct: 657 NKDPGCSWVELNSRVHVFVVGEQQHPE 683
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 180/373 (48%), Gaps = 50/373 (13%)
Query: 266 LGEARRIFDEMPE--RNEVSWSVMIARYNQSGY-PEEAFRLFRQM-TRYSFKPNTSCFSI 321
L A +FD++P R+ SW+ ++ SG+ P +A FR M + + P+ F+
Sbjct: 65 LAAAFAVFDDIPPAARDVTSWNSLLNPL--SGHRPLDALSRFRSMLSSSTVLPSPHSFAA 122
Query: 322 VLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+A A + +G HA KI +V++ +L+++Y K G D R V
Sbjct: 123 AFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRV------- 175
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
FD MP+RN SWS +++GY K + F +F
Sbjct: 176 ---------------------------FDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 441 EMLLSGEIPN-KSTF--SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
ML E P+ KS F ++VL A + L G+ +HG I+K G V + +L YA
Sbjct: 209 LML--EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYA 266
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K+G + ++ VF+ ++N I+W+ M+ G A++G A ++++F +M TP E T +
Sbjct: 267 KAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVG 326
Query: 558 VLFACSHSGLVDKGLKYFNSMEPI-YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
VL A S G + G + M + + ++ + + +VDM ++ G +++A++ + + +
Sbjct: 327 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK--SALVDMYAKCGCIADAKEGFDQL-Y 383
Query: 617 EPDSNAWASLLSG 629
E D W +++SG
Sbjct: 384 EVDIVLWTAMVSG 396
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 132/332 (39%), Gaps = 70/332 (21%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
S+FS F T + +L + + G+ HG ++K G + Y+ + L+ MY
Sbjct: 307 SMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMY 366
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
+ G + +A+ FD + E + V WTA++S
Sbjct: 367 -------------------------------AKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G +++G E EAL L+ ++ + G+ P++ T
Sbjct: 396 GHVQNGEHE-------------------------------EALTLYARMDKEGIIPSKST 424
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+S +ACA I G + I K G V ++L T+ K G ++ SVF R+
Sbjct: 425 IASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP 484
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV----MIARYNQSGYPEEAFR 302
RDV++W I+ F + G A +F+EM + ++ ++ + G + +
Sbjct: 485 DRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWE 544
Query: 303 LFRQMTR-YSFKP---NTSCFSIVLSALASLK 330
F MT+ Y P + +C +LS LK
Sbjct: 545 YFSLMTKDYGLTPRLDHYACMVDILSRAGMLK 576
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 144/342 (42%), Gaps = 68/342 (19%)
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
R G +HA LK G ++N+LI+ YS
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRP------------------------- 63
Query: 393 GGYGLNGQMEEAKELFDNMPK--RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-P 449
+ A +FD++P R+ SW+++++ H+ D + F ML S + P
Sbjct: 64 -------LLAAAFAVFDDIPPAARDVTSWNSLLNPLSGHRPLD-ALSRFRSMLSSSTVLP 115
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY-DVFLGTALTDTYAKSGDIESSRRV 508
+ +F++ A+A AS G H K+ +V++ T+L + Y K G + +RRV
Sbjct: 116 SPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRV 175
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACS---- 563
FD MP +N SW+ MV G A ++E+ +LF M E+ +E +VL A S
Sbjct: 176 FDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLG 235
Query: 564 -------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
H +V GL F S+E +V M +++G + A S
Sbjct: 236 LLMGEQMHGLIVKDGLLDFVSVE------------NSLVTMYAKAGCMGAAFHVFES-SR 282
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
E +S W+++++G Y A+ AV ++ H AG+
Sbjct: 283 ERNSITWSAMITG---YAQNGEADSAVS---MFSQMHAAGFT 318
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 212/714 (29%), Positives = 345/714 (48%), Gaps = 104/714 (14%)
Query: 24 CLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN 83
C +L T G+ LHG ++K G E Y+ L+ +Y S A +I ++
Sbjct: 254 CQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMS 313
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGM----PERNEVSWTALIS-----GFMKHGRV 134
D V +N +I+ Q G + A LF M + + V+ +L+S G + +G+
Sbjct: 314 QRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ 373
Query: 135 EESMWYFERNPFQNVISWTAAI-----CGFVQNGFSF-----------EALKLFLKLLES 178
S + + +++ + + C ++ F ++ ++F ++
Sbjct: 374 FHS-YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIE 432
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G+ PN+ T+ SI K C + LG + + K GF+ +V V
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS---------------- 476
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+V++D++ + G L A +IF + E + VSW+ MIA Y Q
Sbjct: 477 ---------------SVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFT 521
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EA LF++M K + F+ +SA A ++AL G +HA G D+ I NAL+
Sbjct: 522 EALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALV 581
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
LY++CG+ + EA FD + +++VS
Sbjct: 582 SLYARCGKVR----------------------------------EAYAAFDQIYAKDNVS 607
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W++++SG+ + F+ +F +M +G N TF S + A+A++A++ GK +HG I
Sbjct: 608 WNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIR 667
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
K G+ + + AL YAK G I+ +ISW M+ G ++ G E++
Sbjct: 668 KTGYDSETEVSNALITLYAKCGTID-------------DISWNSMITGYSQHGCGFEALK 714
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LFE+M++ + PN +T + VL ACSH GLVD+G+ YF SM +N+ P HY CVVD+L
Sbjct: 715 LFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLL 774
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
RSG LS A+ F+ MP +PD+ W +LLS C +KN I E A +L +L + A YV
Sbjct: 775 GRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYV 834
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
L+SN+YA +G+W R++M ++G++K G SWVEV N VH FF ++P+
Sbjct: 835 LVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPR 888
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 218/535 (40%), Gaps = 118/535 (22%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE----- 77
T LL S + G+ H + IK G+ + + LL +Y+ A+E
Sbjct: 354 TVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCY 413
Query: 78 --------------------IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
IV + + ++ C G Q L G
Sbjct: 414 GQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV 473
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
VS + LI + KHG+++ ++ F R +V+SWTA I G+ Q+ EAL LF ++ +
Sbjct: 474 YVS-SVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQD 532
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
G+K + + F+S ACA I G + +G+ +S+ N+L++L + G+V
Sbjct: 533 QGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVRE 592
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A + FD++ +D VSW ++ F + SGY
Sbjct: 593 AYAAFDQIYAKDNVSWNSLVSGFAQ-------------------------------SGYF 621
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEA +F QM + + N+ F +SA A++ +R G +H + K G + + +SNAL
Sbjct: 622 EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNAL 681
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
I LY+KCG D +SWNSMI GY +G EA +LF++M
Sbjct: 682 ITLYAKCGTIDD----------------ISWNSMITGYSQHGCGFEALKLFEDM------ 719
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG------- 470
KQ D+ +PN TF VL A + V +++G
Sbjct: 720 ------------KQLDV-------------LPNHVTFVGVLSACSHVGLVDEGISYFRSM 754
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ H + K P + D +SG + ++R + MP + + W ++
Sbjct: 755 SEAHNLVPK---PEHY---ACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLL 803
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 213/489 (43%), Gaps = 82/489 (16%)
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
E+H NS L L G ++ +RS +D ++ ++D ++ GDL A +FDE
Sbjct: 73 EQHGVRANSQTFLWLLEGCLN-SRSFYDGLK---------LIDFYLAFGDLNCAVNVFDE 122
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA-SLKALRS 334
MP R+ W+ + + LFR+M + + + F++VL + + + R
Sbjct: 123 MPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRF 182
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+HA + G E FI N LIDLY K
Sbjct: 183 VEQIHAKTITSGFESSTFICNPLIDLYFK------------------------------- 211
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
NG + AK++F+N+ R+ VSW A+ISG ++ + +F +++LS
Sbjct: 212 ---NGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLS--------- 259
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
A V E GK LHG ++K GF + ++ AL Y++SG++ S+ ++F M
Sbjct: 260 -----ACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQ 314
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ +S+ ++ GLA+ GY ++ LF++M P+ +T+ S+L AC+ G + G K
Sbjct: 315 RDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG-KQ 373
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF----------------INSMPFE- 617
F+S + + ++D+ + + A +F M E
Sbjct: 374 FHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEG 433
Query: 618 --PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV--LLSNIYASAGRWIDA 673
P+ + S+L C T + E+ + K + YV +L ++YA G+ A
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV-YVSSVLIDMYAKHGKLDHA 492
Query: 674 MNVRKLMTE 682
+ + + + E
Sbjct: 493 LKIFRRLKE 501
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 312/597 (52%), Gaps = 68/597 (11%)
Query: 114 PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFL 173
P+++ + T LI + + G VEE+ F+ P ++V++WTA I G+ + ++ A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFH 100
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
++ + G PNE T SS+ K+C + G V G++ K G E + V N+L+ +
Sbjct: 101 EMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNM----- 155
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+ +V ++ A IF ++ +N+V+W+ +I +
Sbjct: 156 ----------------YATCSVTMEA---------AFLIFRDIKVKNDVTWTTLITGFTH 190
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G ++++QM + C +I + A AS+ ++ +G +HA V+K G + ++ +
Sbjct: 191 LGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPV 250
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
N+++D Y +CG + EAK F M
Sbjct: 251 MNSILDFYCRCG----------------------------------YLSEAKRYFHEMED 276
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
++ ++W+ +IS LE +F G +PN TF+S++ A A++A+L G+ L
Sbjct: 277 KDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL 335
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRGLAESGY 532
HG+I + GF +V L AL D YAK GDI S RVF + ++ N +SWT M+ G GY
Sbjct: 336 HGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGY 395
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
E++ LF++M + I P+ + ++VL AC H+GLV+KGLKYFN ME Y I P+ Y
Sbjct: 396 GAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYN 455
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER-AVKNLWKLAE 651
CVVD+L R+G++ EA + + MPF+PD + W ++L CK +K+ + R A K + +L
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKP 515
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
YV+LS IYA+ G+W++ VRK+M G +K G SW+EV NQV F F +D
Sbjct: 516 RMVGTYVMLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQV-FSFAVSD 571
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 210/507 (41%), Gaps = 142/507 (28%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
+I + + G +EEA+ LFD MPER+ V+WTA+I+G+ N +W
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSN--------------YNSCAW 96
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
+ F ++ + G PNE T SS+ K+C + G V G++ K
Sbjct: 97 -----------------ECFHEMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK 139
Query: 213 AGFEKHVSVCNSLI----TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
G E + V N+L+ T S+ M + A +F ++ ++ V+WT ++ F +GD
Sbjct: 140 LGMEGSLYVDNALMNMYATCSVTM---EAAFLIFRDIKVKNDVTWTTLITGFTHLGDGIG 196
Query: 269 ARRIFDEMPERNE--VSWSVMIAR------------------------------------ 290
+++ +M N + + IA
Sbjct: 197 GLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILD 256
Query: 291 -YNQSGYPEEAFRLFRQM---------------------------TRY---SFKPNTSCF 319
Y + GY EA R F +M R+ F PN F
Sbjct: 257 FYCRCGYLSEAKRYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTF 316
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ +++A A++ AL G +H + + G K+V ++NALID+Y+KCG+ D VF I E
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEE 376
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ ++VSW SM+ GYG +G EA ELFD
Sbjct: 377 RR--NLVSWTSMMIGYGSHGYGAEAVELFD------------------------------ 404
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+M+ SG P++ F +VL A +EKG K + + G D + + D +
Sbjct: 405 -KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 499 SGDIESSRRVFDRMPDK-NEISWTVMV 524
+G I + + +RMP K +E +W ++
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 175/452 (38%), Gaps = 109/452 (24%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA----------- 75
+LK + ++ G +HG ++K G+ Y+ L+ MY ++EA
Sbjct: 117 VLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVK 176
Query: 76 NEIV------------KDLNGFDLVVHNCMINANIQWGNLEEAQRL---FDGMPERNEVS 120
N++ + G + + NA++ + A R D + ++
Sbjct: 177 NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIH 236
Query: 121 WTALISGFMKH--------------GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
+ + GF + G + E+ YF +++I+W I ++ S
Sbjct: 237 ASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISE-LERSDSS 295
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EAL +F + G PN TF+S+ ACA I G + G I++ GF K+V + N+LI
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALI 355
Query: 227 TLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+ K G++ + VF + E+R++VSWT S
Sbjct: 356 DMYAKCGDIPDSERVFGEIEERRNLVSWT------------------------------S 385
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM-HVHAHVLK 344
+MI Y GY EA LF +M +P+ F VLSA + G+ + + +
Sbjct: 386 MMIG-YGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
GI D I N ++DL G G++ EA
Sbjct: 445 YGINPDRDIYNCVVDL----------------------------------LGRAGKIGEA 470
Query: 405 KELFDNMP-KRNDVSWSAIISGYLEHKQFDLV 435
EL + MP K ++ +W AI+ HK L+
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKHTGLI 502
>gi|224080303|ref|XP_002306089.1| predicted protein [Populus trichocarpa]
gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 347/640 (54%), Gaps = 27/640 (4%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
L +N++V L +C+IN EAQ+LFD MP+RN SW +IS +K
Sbjct: 24 LTSNQLVH------LYSKHCLIN---------EAQKLFDEMPQRNTYSWNTIISAHIKSQ 68
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQ-NGFSFEALKLFLKL--LESGVKPNEVTFSS 189
+ ++ F+ ++++++ + + G+V +G+ AL+LF+++ + + ++ +++T +S
Sbjct: 69 NLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSIRNEIEIDDLTITS 128
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR- 248
+ +++ + G + + K G ++ V +SLI + K G A VF E+
Sbjct: 129 MVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEACQVFKGCEREG 188
Query: 249 --DVVSWTVILDVFIEMGDLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFR 305
D+VS ++ + GD+ A R+F E N+ VSW+ +I+ Y Q+GYP EA +LF
Sbjct: 189 GFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGYPVEALKLFV 248
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M K N F VLSA A L+ L+ G +HA +LK G+ F+ + ++D+Y KCG
Sbjct: 249 CMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCG 308
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
K + ++ + V S SMI G+ G M EA LFD++ ++N + W+A+ SG
Sbjct: 309 NMKYAESL---LLTRGVRSSFSITSMIVGFSSQGNMVEACRLFDSLEEKNSIVWAALFSG 365
Query: 426 YLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
Y++ KQ + F + E + IP+ S A A+L GK +HG + ++G
Sbjct: 366 YVKLKQCEAFFELLREYIAKEAAIPDALILISAFNVCAFQAALGPGKQIHGYVFRMGIEM 425
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D+ TA+ D Y+K G I + ++F ++ +++ + + VM+ G A G+ ++INLF+EM
Sbjct: 426 DMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVLYNVMLAGYAHHGHEIKAINLFQEML 485
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + P+ +T +++L AC H GLVD G K F SM Y+I P HY C++D+ R+ +L
Sbjct: 486 ERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLYGRASQL 545
Query: 605 SEAEDFINSMPFE-PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
+ F+ +P E D+ + + C+ N ++A+ A + L + + A YV L+N+
Sbjct: 546 EKMVLFMQRIPMEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSGARYVQLANV 605
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA+ G W + +R+ M K +K GCSWV + N+VH F
Sbjct: 606 YAAEGNWAEMGRIRREMRGKEAKKFAGCSWVYLDNEVHSF 645
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 216/461 (46%), Gaps = 38/461 (8%)
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K+GF + N L+ L K ++ A+ +FD M +R+ SW I+ I+ +L +A+
Sbjct: 16 KSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIISAHIKSQNLAQAKS 75
Query: 272 IFDEMPERNEVSWSVMIARY-NQSGYPEEAFRLFRQMT--RYSFKPNTSCFSIVLSALAS 328
IFD R+ V+++ M++ Y + GY A LF +M R + + + +++ +
Sbjct: 76 IFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSIRNEIEIDDLTITSMVNLFSK 135
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L G +H++++K G ++ F+ ++LID+YSKCG K+ VF + +VS
Sbjct: 136 LCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEACQVFKGCEREGGFDLVSK 195
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
N+M+ Y G ME A LF + ND VSW+ +ISGY+++ +F M +G
Sbjct: 196 NAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGYPVEALKLFVCMGENGV 255
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR- 506
N+ TF SVL A A + +L+ GK++H I+K G F+ + + D Y K G+++ +
Sbjct: 256 KWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMKYAES 315
Query: 507 ------------------------------RVFDRMPDKNEISWTVMVRGLAESGYAKES 536
R+FD + +KN I W + G + +
Sbjct: 316 LLLTRGVRSSFSITSMIVGFSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVKLKQCEAF 375
Query: 537 INLFEE-MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
L E + K + P+ L ++S C+ + G K + I+ + + T ++
Sbjct: 376 FELLREYIAKEAAIPDALILISAFNVCAFQAALGPG-KQIHGYVFRMGIEMDMKTTTAMI 434
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
DM S+ G + AE + E D + +L+G + +E
Sbjct: 435 DMYSKCGSIPYAEKLFLKV-IERDLVLYNVMLAGYAHHGHE 474
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 165/370 (44%), Gaps = 74/370 (20%)
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+++L+ G+ H +K G + SN L+ LYSK + + +FD + +++ SW
Sbjct: 1 MRSLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRN---TYSW 57
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEML-LSG 446
N++I + + + +AK +FD+ R+ V++++++SGY+ ++ +F EM +
Sbjct: 58 NTIISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSIRN 117
Query: 447 EIP-NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK------- 498
EI + T +S++ + + + G+ LH ++K G F+ ++L D Y+K
Sbjct: 118 EIEIDDLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEA 177
Query: 499 ---------------------------SGDIESSRRVFDRMPDKNE-ISWTVMVRGLAES 530
GD+E + R+F R + N+ +SW ++ G ++
Sbjct: 178 CQVFKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQN 237
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACS--------------------------H 564
GY E++ LF M + + NE T SVL AC+
Sbjct: 238 GYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVE 297
Query: 565 SGLVD-----KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
SG+VD +KY S+ ++ + + +V S G + EA +S+ E +
Sbjct: 298 SGIVDVYCKCGNMKYAESLLLTRGVRSSFSITSMIVG-FSSQGNMVEACRLFDSLE-EKN 355
Query: 620 SNAWASLLSG 629
S WA+L SG
Sbjct: 356 SIVWAALFSG 365
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 139/318 (43%), Gaps = 48/318 (15%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL--GSRK 71
E +F S + C L +NL I G+ +H ++K G+ ++ + ++ +Y G+ K
Sbjct: 259 EHTFGSVLSACADL------RNLKI-GKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMK 311
Query: 72 SLEANEIVKDL-NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
E+ + + + + F + MI GN+ EA RLFD + E+N + W AL SG++K
Sbjct: 312 YAESLLLTRGVRSSFSIT---SMIVGFSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVK 368
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+ E +FE + I+ AAI P+ + S
Sbjct: 369 LKQCEA---FFE--LLREYIAKEAAI-------------------------PDALILISA 398
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
CA G + G +F+ G E + ++I + K G + A +F ++ +RD+
Sbjct: 399 FNVCAFQAALGPGKQIHGYVFRMGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDL 458
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQ 306
V + V+L + G +A +F EM ER + V++ +++ G + + F
Sbjct: 459 VLYNVMLAGYAHHGHEIKAINLFQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYS 518
Query: 307 MTR-YSFKPNTSCFSIVL 323
MT Y P T ++ ++
Sbjct: 519 MTEDYHILPETDHYACMI 536
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 37/256 (14%)
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV- 524
SL+ G H + IK GF + L Y+K I ++++FD MP +N SW ++
Sbjct: 3 SLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIIS 62
Query: 525 -----RGLAES--------------------------GYAKESINLFEEME--KTSITPN 551
+ LA++ GY + ++ LF EM+ + I +
Sbjct: 63 AHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSIRNEIEID 122
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+LTI S++ S G + + M N + +G + ++DM S+ G EA
Sbjct: 123 DLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDR-SGFVVSSLIDMYSKCGCFKEACQVF 181
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EHPAGYVLLSNIYASAGRW 670
E + S + Y E E A++ W+ +E + L + Y G
Sbjct: 182 KGCEREGGFD-LVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGYP 240
Query: 671 IDAMNVRKLMTEKGLR 686
++A+ + M E G++
Sbjct: 241 VEALKLFVCMGENGVK 256
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 273/459 (59%), Gaps = 6/459 (1%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ +++E +G A ++F +M + VS+++MI Y + G+ EA + +M KP+
Sbjct: 168 LMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPD 227
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK--DVFISNALIDLYSKCGETKDGRLV 373
+L L + G VHA + + G+ K ++ ++NAL+D+Y KC E + + +
Sbjct: 228 EFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSI 287
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F+ IV KD +SWN+MI GY G +E A F++MP R+ VSW++II+GY +
Sbjct: 288 FNVIVRKDT---ISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCL 344
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+V +F M+ P+ T +++ A+A + +L G+ +HG ++++ D FLG+A
Sbjct: 345 MVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFI 404
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D Y K G I+ + VF + +K+ WT M+ G A GY +++ LF EM++ + PN++
Sbjct: 405 DMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQEY-VMPNQV 463
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T ++VL ACSHSG V +GL+ FNSM+ Y I+P HY C+VD+L RSGR SE +D I
Sbjct: 464 TFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEM 523
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP +P + W ++LS C+ Y N +IAE A K L KL E GYVLLSNIYA++GRW +
Sbjct: 524 MPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHS 583
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R++M +G++K+ GCS V V +H F +P+
Sbjct: 584 DKIREIMESRGVKKTAGCSSVVVDGIIHEFVAADKRHPR 622
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 183/378 (48%), Gaps = 38/378 (10%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F++ + +S+ I G+ + G + EALK +++ G+KP+E T + C + D
Sbjct: 185 FQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDA 244
Query: 201 RLGLSVFGLIFKAGFEKHVSVC--NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+LG SV I + G K ++ N+L+ + +K E+ +A+S+F+ + ++D +SW ++
Sbjct: 245 QLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIA 304
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ ++G+L A F++MP R+ VSW+ +IA Y Q G RLF M + P+
Sbjct: 305 GYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVT 364
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++SA A + AL G +H V+++ ++ D F+ +A ID+Y KCG K +VF +
Sbjct: 365 IINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVT 424
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
EKDV W +MI G+ +G +A +LF M + Y+
Sbjct: 425 EKDVT---VWTTMITGFAFHGYGSKALQLFYEMQE------------YV----------- 458
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYA 497
+PN+ TF +VL A + + +G + + + G V L D
Sbjct: 459 ---------MPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLG 509
Query: 498 KSGDIESSRRVFDRMPDK 515
+SG + V + MP K
Sbjct: 510 RSGRFSEVKDVIEMMPMK 527
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 152/321 (47%), Gaps = 26/321 (8%)
Query: 30 DITSQNLVIQGRALHGH----------LIKTGIHKERYLTTRLLIM--YLGSRKS----- 72
D S N++I G A GH ++ G+ + + LLI LG +
Sbjct: 192 DAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVH 251
Query: 73 --LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+E ++K N L+++N +++ ++ L AQ +F+ + ++ +SW +I+G+ K
Sbjct: 252 AWIERRGLIKSSN---LILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAK 308
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G +E + +FE P ++++SW + I G+ Q G +LF ++ + P+ VT ++
Sbjct: 309 VGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINL 368
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
A AEI G + G + + + + ++ I + K G + A VF + ++DV
Sbjct: 369 VSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDV 428
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPER---NEVSWSVMIARYNQSGYPEEAFRLFRQM 307
WT ++ F G +A ++F EM E N+V++ ++ + SG+ + R+F M
Sbjct: 429 TVWTTMITGFAFHGYGSKALQLFYEMQEYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSM 488
Query: 308 T-RYSFKPNTSCFSIVLSALA 327
RY +P + ++ L
Sbjct: 489 KERYGIEPGVEHYGCLVDLLG 509
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 46/285 (16%)
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
FA +N +L S PN+STF +L AS ++ + + +H I G Y +L L
Sbjct: 115 FAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQ---IHCHAIITGSFYYGYLQNTLMKI 171
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y ++ + + +VF +M + +S+ +M+ G A+ G+ E++ EM + P+E T+
Sbjct: 172 YLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTM 231
Query: 556 LSVLFACS-----------HSGLVDKGL-------------------KYFNSMEPIYN-- 583
L +L C H+ + +GL K + I+N
Sbjct: 232 LGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVI 291
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
++ + + ++ ++ G L A +F MP D +W S+++G + + +R
Sbjct: 292 VRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCR-DLVSWNSIIAGYAQKGDCLMVQRLF 350
Query: 644 KNLWKLAEEHPAGYVLLSNIYASA--------GRWIDAMNVRKLM 680
+N+ +AE +V + N+ ++A GRWI VR M
Sbjct: 351 ENM--VAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQM 393
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 147/386 (38%), Gaps = 74/386 (19%)
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
P N ++ MI+ + S ++F + + PN S F +L A K L M
Sbjct: 93 PHPNLYIYNTMISALSLS--LNQSFAFYNSLLSSCIYPNRSTFLFLLQAS---KFLSQVM 147
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H H + G ++ N L+ +Y +
Sbjct: 148 QIHCHAIITGSFYYGYLQNTLMKIYLE--------------------------------- 174
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
N +M A ++F M + VS++ +I GY + +EM+ G P++ T
Sbjct: 175 -NEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLG 233
Query: 457 VLCASASVASLEKGKDLHGKIIKLGF--PYDVFLGTALTDT------------------- 495
+L + + GK +H I + G ++ L AL D
Sbjct: 234 LLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVR 293
Query: 496 ------------YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
YAK G++E + F+ MP ++ +SW ++ G A+ G LFE M
Sbjct: 294 KDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENM 353
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+I P+ +TI++++ A + G + G ++ + +K + + +DM + G
Sbjct: 354 VAENIWPDFVTIINLVSAAAEIGALHHG-RWIHGWVVRMQMKIDAFLGSAFIDMYWKCGS 412
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSG 629
+ A + E D W ++++G
Sbjct: 413 IKRACMVFREVT-EKDVTVWTTMITG 437
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 301/549 (54%), Gaps = 39/549 (7%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ I FV+ G A+ LF +L E GV P+ T+ + K I + R G + +
Sbjct: 76 YNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAFVV 135
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K G E VCNSL +D++ E+G + +
Sbjct: 136 KTGLEFDPYVCNSL-------------------------------MDMYAELGLVEGFTQ 164
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSCFSIVLSALASLK 330
+F+EMPER+ VSW++MI+ Y + EEA ++R+M S KPN + LSA A L+
Sbjct: 165 VFEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLR 224
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
L G +H ++ ++ + NAL+D+Y KCG R +FD+++ K+V W S
Sbjct: 225 NLELGKEIHDYIAN-ELDLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVN---CWTS 280
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
M+ GY + GQ+++A+ LF+ P R+ V W+A+I+GY++ F+ A+F EM + G P+
Sbjct: 281 MVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPD 340
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K ++L A + +LE+GK +H I + D + TAL + YAK G IE S +F+
Sbjct: 341 KFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFN 400
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+ D + SWT ++ GLA +G E++ LFE M+ + P+++T ++VL AC H+GLV++
Sbjct: 401 GLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEE 460
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS---NAWASLL 627
G K F+SM IY+I+PN HY C +D+L R+G L EAE+ + +P + + + +LL
Sbjct: 461 GRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALL 520
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
S C+TY N + ER L K+ + + LL++IYASA RW D VR M + G++K
Sbjct: 521 SACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKK 580
Query: 688 SGGCSWVEV 696
G S +EV
Sbjct: 581 VPGYSAIEV 589
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 260/576 (45%), Gaps = 94/576 (16%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL----EANEI 78
T + LLK S + Q + + H+ G+ ++R + +L+ + S SL AN I
Sbjct: 10 TYISLLKSCKSMS---QLKQIQAHIFCFGLQQDRDILNKLMAFSMDS--SLGDFNYANRI 64
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER---------------------- 116
++ L ++N MI A ++ G+L A LF + ER
Sbjct: 65 FNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEV 124
Query: 117 -----------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+ +L+ + + G VE FE P ++ +SW I G+
Sbjct: 125 REGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGY 184
Query: 160 VQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
V+ EA+ ++ ++ +ES KPNE T S ACA + + LG + I +
Sbjct: 185 VRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANE-LDLT 243
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ N+L+ + K G V +AR +FD M ++V WT ++ ++ G L +AR +F+ P
Sbjct: 244 PIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPS 303
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
R+ V W+ MI Y Q + E+A LF +M +P+ +L+ A L AL G +
Sbjct: 304 RDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWI 363
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H ++ + I+ D +S ALI++Y+KCG + +F+ + + D SW S+I G +N
Sbjct: 364 HNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTT---SWTSIICGLAMN 420
Query: 399 GQMEEAKELFDNMP----KRNDVSWSAIIS-----GYLE-------------HKQFDLV- 435
G+ EA ELF+ M K +D+++ A++S G +E H + +L
Sbjct: 421 GKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEH 480
Query: 436 FAVFNEML-----------LSGEIPNKST------FSSVLCASASVASLEKGKDLHGKII 478
+ F ++L L ++P+++ + ++L A + +++ G+ L +
Sbjct: 481 YGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALA 540
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
K+ D L T L YA + E R+V +M D
Sbjct: 541 KVK-SSDSSLHTLLASIYASADRWEDVRKVRSKMKD 575
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 192/419 (45%), Gaps = 67/419 (15%)
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F + RD+++ + + +GD A RIF+ + + +++MI + + G A
Sbjct: 34 FGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAI 93
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF+Q+ P+ + VL + + +R G +HA V+K G+E D ++ N+L+D+Y
Sbjct: 94 SLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMY 153
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
++ G + VF+ + E+D VSWN MI GY + EEA +++ M
Sbjct: 154 AELGLVEGFTQVFEEMPERD---AVSWNIMISGYVRCKRFEEAVDVYRRM---------- 200
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ S E PN++T S L A A + +LE GK++H I
Sbjct: 201 --------------------QMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIAN-E 239
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRM----------------------------- 512
+G AL D Y K G + +R +FD M
Sbjct: 240 LDLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFE 299
Query: 513 --PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
P ++ + WT M+ G + + +++I LF EM+ + P++ ++++L C+ G +++
Sbjct: 300 RSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQ 359
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
G K+ ++ IK + T +++M ++ G + ++ + N + + D+ +W S++ G
Sbjct: 360 G-KWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLK-DMDTTSWTSIICG 416
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 315/578 (54%), Gaps = 56/578 (9%)
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ NPF W A I F EA +F +LE+GV ++ +FS + KAC+ + +
Sbjct: 84 QDNPFL----WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIK 139
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G+ + GL+ + V + N L+ L L+ G + +AR +FDRM KRD VS+ ++D ++
Sbjct: 140 EGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYV 199
Query: 262 EMGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEAFR----LFRQMTRYSFKPN 315
+ G + AR +FD MP ++N +SW+ MI+ Y +S EE R LF +M +
Sbjct: 200 KHGMVKSARELFDVMPMEQKNLISWNSMISGYARS---EEGLRVAWELFEEMPK------ 250
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+D+ N++ID KCG+ ++ +F+
Sbjct: 251 ---------------------------------RDLISWNSMIDGCVKCGKMENAHHLFN 277
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ ++DV VSW +M+ GY G+++ A+ LFD MP+R+ +S +A+++GY+++
Sbjct: 278 QMPKRDV---VSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEA 334
Query: 436 FAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F++ML E+ P+ +T L A A + ++G LH I GF LG AL D
Sbjct: 335 LNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALID 394
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G I+++ VF+ + DK+ W ++ GLA G + + LF EMEK + P+++T
Sbjct: 395 MYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDIT 454
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ VL AC+H+GLV +GL F M ++ ++P +HY C+VD+L R+G + EA+ F+ M
Sbjct: 455 FIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKM 514
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P EP+ W +LLS C+ ++N I E K+L + +P+ YVLLSNIYA G W D
Sbjct: 515 PIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVY 574
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R +M ++ L+K GCS +E+ VH FF + +P+
Sbjct: 575 RIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQ 612
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 237/490 (48%), Gaps = 90/490 (18%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G D+ + NC++ ++ G L A++LFD M +R+ VS+ ++I G++KHG V+ + F+
Sbjct: 154 GSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDV 213
Query: 144 NPFQ--NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
P + N+ISW + I G+ + S E L++ +L E K + ++++S+ C
Sbjct: 214 MPMEQKNLISWNSMISGYAR---SEEGLRVAWELFEEMPKRDLISWNSMIDGC------- 263
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+K G+++ A +F++M KRDVVSW ++D +
Sbjct: 264 ----------------------------VKCGKMENAHHLFNQMPKRDVVSWANMVDGYA 295
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFS 320
++G++ AR +FDEMPER+ +S + M+A Y Q+G+ EA F M +R P+ +
Sbjct: 296 KLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLL 355
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
I LSA+A L G+ +H ++ G + ALID+Y+KCG + VF+ I +K
Sbjct: 356 ITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDK 415
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ H WN++IGG ++G E A ELF M K +F
Sbjct: 416 SIDH---WNAIIGGLAIHGLGEVAFELFMEMEK---------------------LFVK-- 449
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGK---DLHGKIIKLGFPYDVFLGTALTDTYA 497
P+ TF VL A +++G +L ++ K+ P G + D
Sbjct: 450 --------PDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVE-PKLQHYG-CMVDILG 499
Query: 498 KSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-----PN 551
++G +E +++ ++MP + N++ W R L + E+ + E + K I+ P+
Sbjct: 500 RAGHVEEAKKFVEKMPIEPNDVVW----RTLLSACRNHENFTIGEPVAKHLISVDSYNPS 555
Query: 552 ELTILSVLFA 561
+LS ++A
Sbjct: 556 SYVLLSNIYA 565
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 152/362 (41%), Gaps = 70/362 (19%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
E+ +++ DL+ N MI+ ++ G +E A LF+ MP+R+ VSW ++ G+ K G ++
Sbjct: 243 ELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDI 302
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACA 195
+ F+ P ++VIS A + G+VQNG EAL F +L + P+ T A A
Sbjct: 303 ARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIA 362
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
++ F G+++ I GF + +LI + K G +D A SVF+ ++ + + W
Sbjct: 363 QLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNA 422
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
I I G E AF LF +M + KP+
Sbjct: 423 I-------------------------------IGGLAIHGLGEVAFELFMEMEKLFVKPD 451
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
F VL+A + G K+G + F+
Sbjct: 452 DITFIGVLNAC-----------------------------------NHAGLVKEGLMCFE 476
Query: 376 SI--VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQF 432
+ V K + + M+ G G +EEAK+ + MP + NDV W ++S H+ F
Sbjct: 477 LMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENF 536
Query: 433 DL 434
+
Sbjct: 537 TI 538
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 206/724 (28%), Positives = 351/724 (48%), Gaps = 104/724 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
++K + + GR +H G+ + ++ + L+ MY +A ++ + D
Sbjct: 152 VVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERD 211
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERN------------EVSWT------------ 122
V+ N M++ ++ G++ A LF M VS T
Sbjct: 212 CVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT 271
Query: 123 ---------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
L+S + K +++ F P ++++W I G VQNGF +
Sbjct: 272 LAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQ 331
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL LF + +SG++P+ VT S+ A ++N F G + G I + V + ++L+
Sbjct: 332 ALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVD 391
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K V +A+SV+D + DVV +G S M
Sbjct: 392 IYFKCRAVRMAQSVYDSSKAIDVV--------------IG-----------------STM 420
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y +G +EA ++FR + +PN + VL A AS+ A++ G +H++ LK
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E ++ +AL+D+Y+KCG D++H +
Sbjct: 481 EGRCYVESALMDMYAKCGRL-------------DLSHYI--------------------- 506
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F + +++V+W+++IS + ++ + + +F EM + G + T SSVL A AS+ ++
Sbjct: 507 FSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAI 566
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
GK++HG +IK D+F +AL D Y K G++E + RVF+ MP+KNE+SW ++
Sbjct: 567 YYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASY 626
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
G KES++L M++ + +T L+++ AC+H+G V +GL+ F M Y I P
Sbjct: 627 GAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPR 686
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
H+ C+VD+ SR+G+L +A + I MPF+PD+ W +LL C+ ++N ++AE A + L+
Sbjct: 687 MEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELF 746
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
KL + YVL+SNI A AGRW VR+LM + ++K G SWV+V N H F
Sbjct: 747 KLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAAD 806
Query: 708 DHNP 711
+P
Sbjct: 807 KSHP 810
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 225/514 (43%), Gaps = 81/514 (15%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C L +++ + G LH +K G+ E + L+ MY + + ++ +
Sbjct: 249 TLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLM 308
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE--------------------------- 115
DLV N MI+ +Q G +++A LF M +
Sbjct: 309 PRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGK 368
Query: 116 -------RNEVSW-----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
RN V +AL+ + K V + ++ + +V+ + I G+V NG
Sbjct: 369 ELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNG 428
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
S EA+K+F LLE G++PN V +S+ ACA + +LG + K +E V +
Sbjct: 429 MSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L+ + K G +DL+ +F ++ +D V+W ++ F + G+
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGE------------------ 530
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
PEEA LFR+M K + S VLSA ASL A+ G +H V+
Sbjct: 531 -------------PEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVI 577
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K I D+F +ALID+Y KCG + VF+S+ EK+ VSWNS+I YG G ++E
Sbjct: 578 KGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKN---EVSWNSIIASYGAYGLVKE 634
Query: 404 AKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+ L +M K + V++ A++S Q +F M +I P F+ ++
Sbjct: 635 SVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMV 694
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+ L+K +L I+ + F D + AL
Sbjct: 695 DLYSRAGKLDKAMEL---IVDMPFKPDAGIWGAL 725
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 139/550 (25%), Positives = 237/550 (43%), Gaps = 80/550 (14%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE---RN 144
V+ C+ +++ G + + G+ + T L+ ++ R +++ F R
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLL--ESGVKPNEVTFSSICKACAEINDFRL 202
+ W I G G AL +LK+ S P+ TF + K+CA + L
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V G + + V ++LI + G + AR VFD M +RD V W V++D +++
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + A +F +M SG +PN + +
Sbjct: 225 AGSVSSAVELFGDM---------------RASG----------------CEPNFATLACF 253
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
LS A+ L G+ +H +K G+E +V ++N L+ +Y+KC DG +F + D
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDD- 312
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+V+WN MI G NG +++A LF +M K
Sbjct: 313 --LVTWNGMISGCVQNGFVDQALLLFCDMQK----------------------------- 341
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
SG P+ T S+L A + +GK+LHG I++ DVFL +AL D Y K +
Sbjct: 342 --SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
++ V+D + + + M+ G +G ++E++ +F + + I PN + I SVL AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKP--NGRHY--TCVVDMLSRSGRLSEAEDFINSMPFEP 618
+ + G + + Y +K GR Y + ++DM ++ GRL + +I S
Sbjct: 460 ASMAAMKLGQELHS-----YALKNAYEGRCYVESALMDMYAKCGRL-DLSHYIFSKISAK 513
Query: 619 DSNAWASLLS 628
D W S++S
Sbjct: 514 DEVTWNSMIS 523
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 129/310 (41%), Gaps = 32/310 (10%)
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VL S L G+ VH + G+ D + L+ +Y +D VF S+
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
A + WN +I G + G A + M W+ H
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKM-------WA--------HP---------- 139
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
S +P+ TF V+ + A++ ++ G+ +H LG D+F+G+AL YA G
Sbjct: 140 ----SAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGG 195
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+ +R+VFD M +++ + W VM+ G ++G ++ LF +M + PN T+ L
Sbjct: 196 LLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLS 255
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
+ + G++ +++ Y ++ +V M ++ L + MP + D
Sbjct: 256 VSATESDLFFGVQ-LHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DL 313
Query: 621 NAWASLLSGC 630
W ++SGC
Sbjct: 314 VTWNGMISGC 323
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/472 (38%), Positives = 263/472 (55%), Gaps = 31/472 (6%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G + A ++F + E + W+ MI QS P A L+ QM +P+ F VL
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 85
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A L ++ G VH V ++G E + F+ N LI ++ CG+ R +FD ++DV
Sbjct: 86 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 145
Query: 384 ----------------------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+VSWN MI GY G+ME A++LFD +PKR+
Sbjct: 146 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 205
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
V+W+A+I+GY+ +F EM GE+P++ T S+L A + L+ G+ +H
Sbjct: 206 VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC 265
Query: 476 KIIKLGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
I ++GF V LG AL D YAK G I + VF M +K+ +W ++ GLA G+A+
Sbjct: 266 CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAE 325
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
+SI+LF EM K I P+E+T + VL ACSH+G V++G +YF+ M YNI+PN RHY C+
Sbjct: 326 KSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCM 385
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L R+G L+EA DFI++M EP++ W +LL C+ + N ++ RA L K+ +
Sbjct: 386 VDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDES 445
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ--VHFFF 704
YVLLSNIYAS G W VRKLM + G+RK GCS +E N+ +HF F
Sbjct: 446 GDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFLF 497
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 196/459 (42%), Gaps = 109/459 (23%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W I G Q+ A+ L+ ++ V+P++ TF + KAC + ++G V G +F
Sbjct: 46 WNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVF 105
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ GFE + V N+LI G++ +AR++FD KRDVV+W+ + + G+LG AR+
Sbjct: 106 RLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQ 165
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPE-------------------------------EA 300
+FDEMP ++ VSW+VMI Y + G E +A
Sbjct: 166 LFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQA 225
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNALID 359
+F +M P+ +LSA L L +G +H + ++G V + NALID
Sbjct: 226 LEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALID 285
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG VF + EKDV+ +WNS++GG +G E++ LF M K
Sbjct: 286 MYAKCGSIVRALEVFQGMREKDVS---TWNSVLGGLAFHGHAEKSIHLFTEMRK------ 336
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
L+ + P++ TF VL A + +E+G
Sbjct: 337 -------LKIR------------------PDEITFVGVLVACSHAGRVEEG--------- 362
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAK 534
R+ FD M D+ I + MV L +G
Sbjct: 363 --------------------------RQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLN 396
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
E+ + + M+ I PN + ++L AC G V+ G +
Sbjct: 397 EAFDFIDTMK---IEPNAIVWRTLLGACRIHGNVELGRR 432
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK T V G +HG + + G ++ L+ + A + D
Sbjct: 84 VLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRD 143
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + + + G L A++LFD MP ++ VSW +I+G+ K G +E + F+ P
Sbjct: 144 VVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPK 203
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V++W A I G+V G + +AL++F ++ G P+EVT S+ AC ++ D G +
Sbjct: 204 RDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRI 263
Query: 207 FGLIFKAGFEK-HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
I + GF V + N+LI + K G + A VF M ++DV +W +L G
Sbjct: 264 HCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGH 323
Query: 266 LGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFS 320
++ +F EM + +E+++ ++ + +G EE + F M Y+ +PN +
Sbjct: 324 AEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYG 383
Query: 321 IVLSALA 327
++ L
Sbjct: 384 CMVDLLG 390
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 293/577 (50%), Gaps = 43/577 (7%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F R N W I G+ A F+ + + V+ + +F KAC +
Sbjct: 214 FNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETV 273
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G SV+ +++K GF+ + V N LI +
Sbjct: 274 FEGESVYCVVWKMGFDCELLVRNGLIHF-------------------------------Y 302
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
E G L AR++FDE +++ V+W+ MI Y EEA +F M +PN
Sbjct: 303 AERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLI 362
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+SA + + L G VH V + + + + NAL+D+Y KC D R +FD + K
Sbjct: 363 AVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK 422
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
DV SW SM+ GY G +E A+ FD P++N V WSA+I+GY ++ + +F+
Sbjct: 423 DV---YSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 479
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH-----GKIIKLGFPYDVFLGTALTDT 495
EM+ G +P + T SVL A + L G +H GKII P V L A+ D
Sbjct: 480 EMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKII----PLSVTLENAIVDM 535
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
YAK G I+++ VF MP++N ISW M+ G A +G AK++IN+F++M PN +T
Sbjct: 536 YAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITF 595
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+S+L ACSH GL+ +G +YF++ME Y IKP HY C+VD+L R+G L EA I +MP
Sbjct: 596 VSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMP 655
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
+P AW +LL+ C+ + N ++A + NL +L E YVLL+N A+ +W D
Sbjct: 656 MQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRR 715
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VR LM +KG++K G S +E+ F + +P+
Sbjct: 716 VRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQ 752
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 214/453 (47%), Gaps = 70/453 (15%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GFD L+V N +I+ + G L+ A+++FD +++ V+WT +I G+ H EE+M F
Sbjct: 287 GFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVF 346
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
E +L S V+PNEVT ++ AC+++ +
Sbjct: 347 EL-------------------------------MLLSHVEPNEVTLIAVVSACSDMGNLE 375
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G V + + +S+ N+L+ + +K + AR +FDRM +DV SWT +++ +
Sbjct: 376 MGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYA 435
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ GDL ARR FD+ P +N V WS MIA Y+Q+ P+E+ +LF +M P
Sbjct: 436 KCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVS 495
Query: 322 VLSALASLKALRSGMHVHAH-VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VLSA L L G +H + V+ I V + NA++D+Y+KCG VF ++ E+
Sbjct: 496 VLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPER 555
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ ++SWN+MI GY NG+ ++A +FD M RN
Sbjct: 556 N---LISWNTMIAGYAANGRAKQAINVFDQM--RN------------------------- 585
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKS 499
G PN TF S+L A + + +G++ + K G + + D ++
Sbjct: 586 ----MGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRT 641
Query: 500 GDIESSRRVFDRMP-DKNEISWTVMVRGLAESG 531
G +E + ++ MP E +W ++ G
Sbjct: 642 GLLEEAYKLIANMPMQPCEAAWGALLNACRMHG 674
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 191/388 (49%), Gaps = 22/388 (5%)
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
VS + GDL A IF+ + + N W+ MI Y + P AF F M +
Sbjct: 192 VSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQL 251
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+ ++ F L A + + G V+ V K+G + ++ + N LI Y++ G K+
Sbjct: 252 RVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNA 311
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGY 426
R VFD +KD VV+W +MI GY + EEA E+F+ M + N+V+ A++S
Sbjct: 312 RQVFDESSDKD---VVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSAC 368
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+ ++ V ++ + S +++L L ++L ++ DV
Sbjct: 369 SDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMAT----KDV 424
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ T++ + YAK GD+ES+RR FD+ P KN + W+ M+ G +++ KES+ LF EM +
Sbjct: 425 YSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMER 484
Query: 547 SITPNELTILSVLFACSHSGLVDKG---LKYF--NSMEPIYNIKPNGRHYTCVVDMLSRS 601
+ P E T++SVL AC ++ G +YF + P+ N +VDM ++
Sbjct: 485 GVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENA-----IVDMYAKC 539
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSG 629
G + A + ++MP E + +W ++++G
Sbjct: 540 GSIDAATEVFSTMP-ERNLISWNTMIAG 566
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 85/229 (37%), Gaps = 72/229 (31%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+V + + + N +++ + G+++ A +F MPERN +SW +I+G+ +GR +
Sbjct: 517 VVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAK-- 574
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+A+ +F ++ G +PN +TF S+ AC+
Sbjct: 575 -----------------------------QAINVFDQMRNMGFEPNNITFVSLLTACSH- 604
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS----- 252
G + R FD ME++ +
Sbjct: 605 ----------------------------------GGLISEGREYFDNMERKYGIKPERGH 630
Query: 253 WTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEEA 300
+ ++D+ G L EA ++ MP + E +W ++ G E A
Sbjct: 631 YACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELA 679
>gi|302776320|ref|XP_002971335.1| hypothetical protein SELMODRAFT_94945 [Selaginella moellendorffii]
gi|300161317|gb|EFJ27933.1| hypothetical protein SELMODRAFT_94945 [Selaginella moellendorffii]
Length = 614
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 320/613 (52%), Gaps = 62/613 (10%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK--HGR- 133
EI +D G D + N ++ A + G++ +A+ +FD + RN SWT ++ + HGR
Sbjct: 37 EIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGRE 96
Query: 134 -----------VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+EE+ F +N +SW A + + QNG EA++L+ + G+KP
Sbjct: 97 ALGLMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKP 156
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ TF S+ + G + + ++GF + ++ N+L+++ G VD
Sbjct: 157 DATTFVSVLDGWK--GEGEHGRRIHDQVVESGFGSNTTLANALVSMYGSGGRVD------ 208
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+AR +FD + E+ VSW+ M+ Y Q+G EA
Sbjct: 209 -------------------------DARYVFDGIAEKTVVSWNAMLTAYAQNGRYGEAVD 243
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF +M P+T F VL A ++ G VH H+ G V +S +L+++Y
Sbjct: 244 LFWKM---DVAPDTVSFVNVLGACMDIE---EGRLVHEHIKASGFPVGVLVSTSLVNMYG 297
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
+ ++ + F+ E+D V WNSM+G Y NG MEEAK +FD + ++ V W+A+
Sbjct: 298 RFLRLEEAKQCFEQARERDR---VCWNSMVGAYAQNGCMEEAKAVFDRVASKDIVLWTAL 354
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
++ Y ++ V+ M L G N+ TFSS++ A +L +G+ +H + +G+
Sbjct: 355 LTAYSRNEDAKGALLVYRNMDLEGMEKNRFTFSSIVSVCADAEALAEGQKVHLHTVSVGY 414
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
DV +GT L D Y+K D++++R VFD + K+ ++W VM+ G +G+ +E++ L+++
Sbjct: 415 DKDVIVGTTLVDFYSKCHDVDTARSVFDGIEGKDIVTWNVMITGFVRNGHGREAVRLYQK 474
Query: 543 ME------KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
M+ I P+ELT LSVLFACSH G + +GL F S Y I N +HY CVVD
Sbjct: 475 MDLPPDSLTMGIMPDELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVD 534
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L R GRL EA++ +N MPF+ + AW +LL C+ +++ + RA + +L ++ A
Sbjct: 535 ILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAP 594
Query: 657 YVLLSNIYASAGR 669
Y LLS ++++AGR
Sbjct: 595 YALLSTMFSAAGR 607
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 177/377 (46%), Gaps = 56/377 (14%)
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+ +SI + CA D I + GF + N L+ K G V AR VFDR+
Sbjct: 14 SHASILRDCASTRDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRI 73
Query: 246 EKRDVVSWTVILDVFIE--------------MGDLGEARRIFDEMPERNEVSWSVMIARY 291
++R++ SWT++L + + G L EA+ +F + ERN VSW+ M+A Y
Sbjct: 74 QRRNIFSWTIMLGAYADNGHGREALGLMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAY 133
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q+G+ EEA RL+R M KP+ + F VL G +H V++ G +
Sbjct: 134 AQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEG--EHGRRIHDQVVESGFGSNT 191
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
++NAL+ +Y G D R VFD I EK VVSWN+M+ Y NG+ EA +LF M
Sbjct: 192 TLANALVSMYGSGGRVDDARYVFDGIAEKT---VVSWNAMLTAYAQNGRYGEAVDLFWKM 248
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
DV+ P+ +F +VL A + E+G+
Sbjct: 249 ----DVA------------------------------PDTVSFVNVLGACMDI---EEGR 271
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H I GFP V + T+L + Y + +E +++ F++ +++ + W MV A++G
Sbjct: 272 LVHEHIKASGFPVGVLVSTSLVNMYGRFLRLEEAKQCFEQARERDRVCWNSMVGAYAQNG 331
Query: 532 YAKESINLFEEMEKTSI 548
+E+ +F+ + I
Sbjct: 332 CMEEAKAVFDRVASKDI 348
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 178/389 (45%), Gaps = 36/389 (9%)
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
S + +L AS + L + + + G D ++ N L+ Y KCG +D R VFD
Sbjct: 13 SSHASILRDCASTRDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDR 72
Query: 377 IVEKDVAHVVSWNSMIGGYGLN--------------GQMEEAKELFDNMPKRNDVSWSAI 422
I ++ + SW M+G Y N G +EEAK +F + +RN VSW+A+
Sbjct: 73 IQRRN---IFSWTIMLGAYADNGHGREALGLMYGKCGHLEEAKAVFATLVERNRVSWNAM 129
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
++ Y ++ + ++ M G P+ +TF SVL E G+ +H ++++ GF
Sbjct: 130 LAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVL--DGWKGEGEHGRRIHDQVVESGF 187
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+ L AL Y G ++ +R VFD + +K +SW M+ A++G E+++LF +
Sbjct: 188 GSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGEAVDLFWK 247
Query: 543 MEKTSITPNELTILSVLFAC---SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
M+ + P+ ++ ++VL AC LV + +K S P+ + T +V+M
Sbjct: 248 MD---VAPDTVSFVNVLGACMDIEEGRLVHEHIK--ASGFPVGVLVS-----TSLVNMYG 297
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R RL EA+ E D W S++ Y E A ++A + +
Sbjct: 298 RFLRLEEAKQCFEQAR-ERDRVCWNSMVG---AYAQNGCMEEAKAVFDRVASKDIVLWTA 353
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
L Y+ A+ V + M +G+ K+
Sbjct: 354 LLTAYSRNEDAKGALLVYRNMDLEGMEKN 382
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 174/373 (46%), Gaps = 64/373 (17%)
Query: 67 LGSRKSLEANEIVKD---LNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LG+ +E +V + +GF ++V ++N ++ LEEA++ F+ ER+ V W
Sbjct: 261 LGACMDIEEGRLVHEHIKASGFPVGVLVSTSLVNMYGRFLRLEEAKQCFEQARERDRVCW 320
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+++ + ++G +EE+ F+R ++++ WTA + + +N + AL ++ + G++
Sbjct: 321 NSMVGAYAQNGCMEEAKAVFDRVASKDIVLWTALLTAYSRNEDAKGALLVYRNMDLEGME 380
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N TFSSI CA+ G V G++K V V +L+ K +VD ARSV
Sbjct: 381 KNRFTFSSIVSVCADAEALAEGQKVHLHTVSVGYDKDVIVGTTLVDFYSKCHDVDTARSV 440
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD +E +D+V+W V++ F+ ++G+ EA
Sbjct: 441 FDGIEGKDIVTWNVMITGFV-------------------------------RNGHGREAV 469
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
RL+++M P++ I+ L L L + H ++ G+ D+F+S A +D Y
Sbjct: 470 RLYQKM---DLPPDSLTMGIMPDELTFLSVLFA--CSHGGSIQQGL--DLFLS-AGVD-Y 520
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWS 420
TK V D + G G++EEA+E+ + MP + NDV+W
Sbjct: 521 GIATNTKHYVCVVDIL------------------GRVGRLEEAQEVLNRMPFQANDVAWM 562
Query: 421 AIISGYLEHKQFD 433
++ H+ F+
Sbjct: 563 TLLGACRIHRDFE 575
>gi|242080473|ref|XP_002445005.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
gi|241941355|gb|EES14500.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
Length = 679
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 327/632 (51%), Gaps = 34/632 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ + + G +++AQ+LFD MP R+ +SWTAL++ + G + + + F+ P +N
Sbjct: 45 NALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAA 104
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW A + +++ G A LF K N V++ +I A R +V+ +
Sbjct: 105 SWNALVSLYLRAGRPAAAHALFCK----APAKNAVSYGAIITGLARAGMLREAQAVYWEM 160
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ S N++I L+ GE+ +A VFD M RDV+SW+ ++D + G + EAR
Sbjct: 161 PPRWRDPVGS--NAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEAR 218
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
R+F+ MPERN VSW+ MI Y + G + LF M R + N S+VL A
Sbjct: 219 RLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQAS 278
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-------- 382
+ G VH ++++G +D+F+ ++LI +YS+ G D R +F + +KD+
Sbjct: 279 LVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLIT 338
Query: 383 ----------AHV----------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
AHV +SW SM+ G+ G M E+ ELF+ MP +++++W+A+
Sbjct: 339 GYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAV 398
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+S + + + F +M G PN FS +L A AS+A L +G H + +G+
Sbjct: 399 MSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGW 458
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+D + +L YAK G + + RVF + + I+ M+ A+ G A+++ LF
Sbjct: 459 IFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNR 518
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ PN +T L +L AC+ +GLV G YF SM +Y I+PN HYTC+VD+L R+G
Sbjct: 519 MQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGRAG 578
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L+EA + NSMP + +AW LLS + N +A+ A + L ++ Y +LSN
Sbjct: 579 FLNEALEMTNSMPQKDYPDAWKVLLSSSSLHSNLDLAKLAAQRLLEIDPYDATAYTVLSN 638
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+++SAG D V+ KS G S +
Sbjct: 639 MFSSAGMKEDEEMVKVAQLSNMASKSPGYSLI 670
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 225/491 (45%), Gaps = 95/491 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N MI ++ G L A R+FDGM R+ +SW+A++ G K+G V E+ FE P
Sbjct: 166 DPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAMP 225
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SWT+ I G+V++G + L LFL + GV+ N +T S + CA+ + G
Sbjct: 226 ERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQ 285
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V L+ + GF + + + +SLI + + G + ARS+F M ++D+VSW ++ +++
Sbjct: 286 VHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDM 345
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE-------------------------- 299
+ +A +F MPE++ +SW+ M+ + G+ E
Sbjct: 346 IEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVAN 405
Query: 300 -----AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
A R F QM++ +PNT FS +LSALASL L G+ HA+ + +G D +
Sbjct: 406 GNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVH 465
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+L+ +Y+KCG + VF I +++ NSMI + +G E+A
Sbjct: 466 ASLVTMYAKCGRLAEAHRVFSCISHPS---LIATNSMITAFAQHGLAEDA---------- 512
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
F +FN M G+ PN TF +L A A ++ G
Sbjct: 513 ---------------------FKLFNRMQYDGQRPNHVTFLGILTACARAGLVQHG---- 547
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
Y+ F ES R V+ P+ + +T MV L +G+
Sbjct: 548 ---------YNYF---------------ESMRSVYGIQPNPDH--YTCMVDLLGRAGFLN 581
Query: 535 ESINLFEEMEK 545
E++ + M +
Sbjct: 582 EALEMTNSMPQ 592
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 164/360 (45%), Gaps = 32/360 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +L +LV +G +H +I+ G ++ +L L+IMY +A + +
Sbjct: 266 TLSVVLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFM 325
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
N D+V N +I +Q +E+A LF MPE++ +SWT+++ GF G + ES+ FE
Sbjct: 326 NQKDIVSWNSLITGYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFE 385
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P ++ I+W A + V NG A++ F ++ + G +PN V FS + A A +
Sbjct: 386 QMPVKDEIAWAAVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQ 445
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
GL G+ +V SL+T+ K G
Sbjct: 446 GLQAHAYAVNMGWIFDSAVHASLVTMYAKCGR---------------------------- 477
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
L EA R+F + + ++ + MI + Q G E+AF+LF +M +PN F +
Sbjct: 478 ---LAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDGQRPNHVTFLGI 534
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L+A A ++ G + + + GI+ + ++DL + G + + +S+ +KD
Sbjct: 535 LTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGRAGFLNEALEMTNSMPQKD 594
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 209/653 (32%), Positives = 330/653 (50%), Gaps = 69/653 (10%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
I+ K G++ E+ F+ P + V SW I G+ Q G EAL L + S VK NE
Sbjct: 44 IAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNE 103
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
V+FS+ AC LG + L+FK+G+++ V ++L+ ++ + A VF+
Sbjct: 104 VSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEE 163
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY-NQSGYPEEAFRL 303
+ + V W+++L +++ +G+A IF++MP R+ V+W+ +I+ Y + E A L
Sbjct: 164 LRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDL 223
Query: 304 FRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F M R S PN VL A L+ L G VH +K G + D +S+AL + Y
Sbjct: 224 FGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYC 283
Query: 363 KCGETKDGRLVFDSIVEKDVAHV-----------------------------VSWNSMIG 393
D + V++S+V + ++V +S N MI
Sbjct: 284 VSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIK 343
Query: 394 GYGLNGQMEEAKELFDNMP--------------------------------KRNDVSWSA 421
GY ++GQ +++K+LF+ M +RN V+W++
Sbjct: 344 GYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNS 403
Query: 422 IISGYL---EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
++SGY+ EH + ++ L+ ++STFS + A A + S ++G+ LH +
Sbjct: 404 MMSGYIHNGEHSEALKLYVTMRRFLVE---YSRSTFSVLFRACAYLCSFQQGQLLHAHLA 460
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
K + +V++GTAL D Y+K G + ++R F + N +WT ++ G A G E+I+
Sbjct: 461 KTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAIS 520
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
F M + PN T ++VL ACSH+GLVD+GLK+F+SM+ Y I P HYTCVVD+L
Sbjct: 521 RFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLL 580
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
RSGR+ EAE+FI MP + D W +LL+ + N ++ ERA L+ L + V
Sbjct: 581 GRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLFSLDPNSVSALV 640
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LSN+YA GRW +RK + LRK G SW+E+ N VH F + +P
Sbjct: 641 TLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVEDTTHP 693
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/589 (24%), Positives = 262/589 (44%), Gaps = 92/589 (15%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E SF++ + C T + G+ +H L K+G + + + LL Y+
Sbjct: 103 EVSFSACLSAC-------TRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH-G 132
EA + ++L + V+ + M+ +Q + +A +F+ MP R+ V+WT LISG+ K
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED 215
Query: 133 RVEESMWYF-------ERNPFQNVISWTAAICG--------------FVQNGFSFE---- 167
E ++ F E P + + +C +++GF F+
Sbjct: 216 GCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVS 275
Query: 168 -ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV-------FGLIFKAGFEKHV 219
AL F + ++ V S + +AC+ + D +G V G+IF G
Sbjct: 276 SALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFY-GLRDKT 334
Query: 220 SVCNSLITLSLKM-GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP- 277
+ N+L+ M G+ ++ +F++M + + S ++ V+ + G+L EA ++FD+
Sbjct: 335 LISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKG 394
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
ERN V+W+ M++ Y +G EA +L+ M R+ + + S FS++ A A L + + G
Sbjct: 395 ERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQL 454
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HAH+ K +++V++ AL+D YSKCG D + F SI +VA +W ++I GY
Sbjct: 455 LHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVA---AWTALINGYAY 511
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+G EA + F ML G +PN +TF +V
Sbjct: 512 HGCGSEA-------------------------------ISRFRSMLDQGVVPNAATFVAV 540
Query: 458 LCASASVASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
L A + +++G K H I + T + D +SG ++ + +MP K
Sbjct: 541 LSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKA 600
Query: 517 E-ISWTVMVRGLA-----ESGYAKESINLFEEMEKTSITPNELTILSVL 559
+ + W ++ E G + ++ LF S+ PN ++ L L
Sbjct: 601 DGVIWGALLNASCFWNNVELG-ERAAVKLF------SLDPNSVSALVTL 642
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 187/385 (48%), Gaps = 19/385 (4%)
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
V+S + + + G L EAR +FDEMP R SW+ MI+ Y+Q G EA L M
Sbjct: 37 VISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHS 96
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
K N FS LSA +L G +H+ + K G ++ + +AL+ Y +C ++
Sbjct: 97 SCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIRE 156
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+VF+ + +D HV+ W+ M+ GY + +A E+F+ MP R+ V+W+ +ISGY +
Sbjct: 157 AEMVFEEL--RDENHVL-WSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKR 213
Query: 430 KQ-FDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+ + +F M S E+ PN+ T VL A + L GK +HG IK GF +D
Sbjct: 214 EDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNS 273
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV---MVRGLAESGYAKESINLFEEME 544
+ +AL + Y S ++ ++RV++ M E V ++ GL G KE+ +F +
Sbjct: 274 VSSALAEFYCVSDAVDDAKRVYESMV--GEACSNVADSLIGGLVSMGRVKEAGMIFYGLR 331
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
++ N L I + SG K K F M + N ++ + S++G L
Sbjct: 332 DKTLISNNLMIKGY----AMSGQFKKSKKLFEKMSLKHLTSLN-----TMITVYSKNGEL 382
Query: 605 SEAEDFINSMPFEPDSNAWASLLSG 629
EA + E + W S++SG
Sbjct: 383 DEAVKLFDKTKGERNCVTWNSMMSG 407
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 44/284 (15%)
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
HV+S N I + G++ EA+ +FD MP R SW+ +ISGY + ++ + + M
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH 95
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
S N+ +FS+ L A SL GK +H + K G+ +G+AL Y + I
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAE--------------------------SGYAK--- 534
+ VF+ + D+N + W++M+ G + SGYAK
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED 215
Query: 535 ---ESINLFEEMEKTS-ITPNELTILSVLFACS-----HSGLVDKGLKYFNSMEPIYNIK 585
+++LF M ++S + PNE T+ VL C+ + G V GL + + ++
Sbjct: 216 GCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVS 275
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ CV D + + R+ E SM E SN SL+ G
Sbjct: 276 SALAEFYCVSDAVDDAKRVYE------SMVGEACSNVADSLIGG 313
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 192/444 (43%), Gaps = 56/444 (12%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+L+ ++ G+ +HG IK G + +++ L Y S +A + + + G
Sbjct: 242 CVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGE 301
Query: 86 DLV-VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
V + +I + G ++EA +F G+ ++ +S +I G+ G+ ++S FE+
Sbjct: 302 ACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKM 361
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKL-----------LESG-------------- 179
+++ S I + +NG EA+KLF K + SG
Sbjct: 362 SLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLY 421
Query: 180 -------VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
V+ + TFS + +ACA + F+ G + + K ++++V V +L+ K
Sbjct: 422 VTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKC 481
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA----RRIFDEMPERNEVSWSVMI 288
G + A+ F + +V +WT +++ + G EA R + D+ N ++ ++
Sbjct: 482 GHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVL 541
Query: 289 ARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKI 345
+ + +G +E + F M Y P ++ V+ L RSG A ++++
Sbjct: 542 SACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLG-----RSGRVKEAEEFIIQM 596
Query: 346 GIEKDVFISNALIDLYSKC-------GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
I+ D I AL++ + C GE +L S+ V+ +V+ ++M G
Sbjct: 597 PIKADGVIWGALLN--ASCFWNNVELGERAAVKLF--SLDPNSVSALVTLSNMYARRGRW 652
Query: 399 GQMEEAKELFDNMPKRNDVSWSAI 422
G+ + ++ ++ R D +S I
Sbjct: 653 GKKTKIRKRLQSLELRKDQGFSWI 676
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 152/375 (40%), Gaps = 26/375 (6%)
Query: 2 KASLRSLFSINPETSF---NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL 58
K SL+ L S+N + N ++ + L + + ++ I G H E
Sbjct: 360 KMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEA-- 417
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
L +Y+ R+ L + + F ++ C + Q G L A L + N
Sbjct: 418 ----LKLYVTMRRFL----VEYSRSTFSVLFRACAYLCSFQQGQLLHAH-LAKTPYQENV 468
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
TAL+ + K G + ++ F NV +WTA I G+ +G EA+ F +L+
Sbjct: 469 YVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQ 528
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
GV PN TF ++ AC+ GL F + + ++ L + G V
Sbjct: 529 GVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKE 588
Query: 238 ARSVFDRME-KRDVVSWTVILDV--FIEMGDLGE--ARRIFDEMPERNEVSWSVMIAR-Y 291
A +M K D V W +L+ F +LGE A ++F P N VS V ++ Y
Sbjct: 589 AEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLFSLDP--NSVSALVTLSNMY 646
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
+ G + ++ +++ + + I L+ L ++ H ++ V+ +E
Sbjct: 647 ARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVEDTTHPYSDVIYKTVEHIT 706
Query: 352 FISNALID---LYSK 363
N+++ LYSK
Sbjct: 707 ATINSIVPFNYLYSK 721
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 317/602 (52%), Gaps = 48/602 (7%)
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
++ + TA + + K ++++ F+ + N+ S+ A I G+ Q F AL LF KL
Sbjct: 315 KDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKL 374
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
+S + +E++ S +ACA + GL + GL K+ F +++ V N+ I
Sbjct: 375 SKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFI--------- 425
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
D++ + L EA R+FDEM ++ VSW+ +IA + Q+
Sbjct: 426 ----------------------DMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNE 463
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
+ + M R +P+ F VL A A +L GM +H ++K+G+ + +I +
Sbjct: 464 ERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGS 522
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ----MEEAKELFDNM 411
+L+D+YSKCG + + + I IG + +EE K + D
Sbjct: 523 SLVDMYSKCGMIDEAEKIHNKIFIG-----------IGDSNTYSEHPETIEEPKGIQDRR 571
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
+ VSW+AIISGY+ KQ + FN M+ G P+K T+S+VL A++AS+ GK
Sbjct: 572 VQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGK 631
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H +IK YDV++ + L D Y+K G++ SR +F++ P ++ ++W M+ G A G
Sbjct: 632 QIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHG 691
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+E+I LFE M +I PN T +S+L AC+H GLV++GL YF+ M+ Y + P HY
Sbjct: 692 MGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHY 751
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK-NEQIAERAVKNLWKLA 650
+ +VD+L +SG + +A + I MPFE D W +LLS CK + N + AE A L +L
Sbjct: 752 SNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLD 811
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+ + Y+LLSNIYA AG W A +R M L+K GCSWVE+R++ H F +
Sbjct: 812 PQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAH 871
Query: 711 PK 712
P+
Sbjct: 872 PR 873
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 269/546 (49%), Gaps = 70/546 (12%)
Query: 82 LNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
++GF + V NC++ I GNL A +LFDGMP R+ VSW A+I G+ + +
Sbjct: 77 ISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASL 136
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
FE P ++V+SW + + GF+Q G + E++K+F+++ SGV+ + +FS I K C+ + +
Sbjct: 137 CFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILEN 196
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
++LG + G+ + G++ DVVS + +LD+
Sbjct: 197 YKLGTQIHGIALRMGYDT-------------------------------DVVSGSALLDM 225
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + L E+ +F MP++N +SWS +IA Q+ + + ++F++M + + S +
Sbjct: 226 YAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIY 285
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ VL + A+L LR G +HAH LK KD + A +D+Y+KC +D + +FD
Sbjct: 286 ASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDM--- 342
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ ++ S+N+MI GY A LF + K + F
Sbjct: 343 SENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSS---------------------LGF 381
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+E+ LSG L A A+V L +G LHG K F ++ + A D Y K
Sbjct: 382 DEISLSG----------ALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKC 431
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
++ + RVFD M K+ +SW ++ ++ +++N+ M ++ + P+E T SVL
Sbjct: 432 EALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVL 491
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE-P 618
AC+ L + G++ ++ + + N + +VDM S+ G + EAE N +
Sbjct: 492 KACAGDSL-NHGMEIHTTIVKL-GMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIG 549
Query: 619 DSNAWA 624
DSN ++
Sbjct: 550 DSNTYS 555
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 221/456 (48%), Gaps = 41/456 (8%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
FS + K CA+ LG + +GF V V N L+ L + G + A +FD M
Sbjct: 52 FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
RDVVSW ++ + D+ A F+ MP R+ VSW+ M++ + Q+G E+ ++F +
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R + + FS++L + L+ + G +H L++G + DV +AL+D+Y+KC
Sbjct: 172 MGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK- 230
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+++E+ +F MP++N +SWSAII+G
Sbjct: 231 ---------------------------------RLDESFTVFYAMPQKNWISWSAIIAGC 257
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+++ D +F EM G ++S ++SVL + A++ L G LH +K F D
Sbjct: 258 VQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDG 317
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ TA D YAK +++ ++R+FD + N S+ M+ G ++ ++ LF ++ K+
Sbjct: 318 IVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKS 377
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
S+ +E+++ L AC+ + +GL+ + + N N +DM + L E
Sbjct: 378 SLGFDEISLSGALRACATVKGLSEGLQ-LHGLATKSNFSRNICVANAFIDMYGKCEALDE 436
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
A + M D+ +W ++++ +EQ ER+
Sbjct: 437 ACRVFDEMG-RKDAVSWNAIIAA-----HEQNEERS 466
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 228/536 (42%), Gaps = 100/536 (18%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LH H +K+ K+ + T L MY +A + +L +N MI Q
Sbjct: 301 GTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQ 360
Query: 100 WGNLEEAQRLF-------------------------DGMPE--------------RNEVS 120
N A LF G+ E RN
Sbjct: 361 KDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICV 420
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
A I + K ++E+ F+ ++ +SW A I QN + L + + +L SG+
Sbjct: 421 ANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGM 480
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P+E TF S+ KACA + G+ + I K G + + +SL+ + K G +D A
Sbjct: 481 EPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEK 539
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGD----------LGEARRIFDEMPERNEVSWSVMIAR 290
+ ++ +FI +GD + E + I D + VSW+ +I+
Sbjct: 540 IHNK--------------IFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISG 585
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
Y E+A R F +M P+ +S VL A+L ++ G +HAHV+K ++ D
Sbjct: 586 YVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYD 645
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
V+I + L+D+YSKCG D RL+F+ +D V+WN+MI GY +G EEA +LF++
Sbjct: 646 VYICSTLVDMYSKCGNLHDSRLMFEKAPIRD---FVTWNAMICGYAHHGMGEEAIKLFES 702
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
M+L +PN +TF S+L A A + +E+G
Sbjct: 703 -------------------------------MVLMNIMPNHATFVSLLRACAHMGLVERG 731
Query: 471 KD-LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
D H + G + + + D KSG++E + + MP + +++ W ++
Sbjct: 732 LDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLL 787
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 49/244 (20%)
Query: 31 ITSQNLVIQGRALH----------GHLIKTGIHKERYLTTRLL-----IMYLGSRKSLEA 75
I S N +I G + +++ GI +++ + +L + +G K + A
Sbjct: 576 IVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHA 635
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
+ I K+L +D+ + + +++ + GNL +++ +F+ P R+ V+W A+I G+ HG E
Sbjct: 636 HVIKKELQ-YDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGE 694
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
EA+KLF ++ + PN TF S+ +ACA
Sbjct: 695 -------------------------------EAIKLFESMVLMNIMPNHATFVSLLRACA 723
Query: 196 EINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSW 253
+ GL F ++ K G + + ++++ + K GEV+ A + M + D V W
Sbjct: 724 HMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIW 783
Query: 254 TVIL 257
+L
Sbjct: 784 RTLL 787
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 45/216 (20%)
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
+ FS V A + E GK H +I GF VF+ L Y G++ + ++FD
Sbjct: 50 ANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDG 109
Query: 512 MPDKNEISWTVMVRGLA-------------------------------ESGYAKESINLF 540
MP ++ +SW M+ G A ++G ES+ +F
Sbjct: 110 MPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVF 169
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV----- 595
EM ++ + + + +L CS L+ + I+ I + T VV
Sbjct: 170 IEMGRSGVEFDNKSFSVILKVCSI-------LENYKLGTQIHGIALRMGYDTDVVSGSAL 222
Query: 596 -DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
DM ++ RL E+ +MP + + +W+++++GC
Sbjct: 223 LDMYAKCKRLDESFTVFYAMP-QKNWISWSAIIAGC 257
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 210/630 (33%), Positives = 316/630 (50%), Gaps = 102/630 (16%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G D+ V +I+ + G+L AQR+FDG+ ER V WT LI+ +
Sbjct: 177 GTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRY--------------- 221
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
VQ G + + ++LFL +L+ G +P+ + SS+ AC E+ RLG
Sbjct: 222 ----------------VQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLG 265
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ + + G V L+ + K+ +ME+
Sbjct: 266 QQLHSVALRLGLVSDSCVSCGLVDMYAKL-----------KMER---------------- 298
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE-AFRLFRQMTRYSFKPNTSCFSIV 322
+ AR++F MP N +SW+ +I+ Y QSG E LFR+M S +PN +S +
Sbjct: 299 -SMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNL 357
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A A+L SG +HAHVLK I
Sbjct: 358 LKACANLSDQDSGRQIHAHVLKTSI----------------------------------- 382
Query: 383 AHV-VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
AHV V N+++ Y +G MEEA++ FD + + N +S S + E ++ + + E
Sbjct: 383 AHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDV----ETERNNASCSSKIE 438
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+ G + TF+S+L A+ASV L KG+ LH +K GF D + +L YA+ G
Sbjct: 439 GMDDG--VSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGY 496
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+E + R FD M D N ISWT ++ GLA+ GYAK+++++F +M + PN++T ++VL A
Sbjct: 497 LEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSA 556
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH GLV +G ++F SM+ + + P HY C+VD+L+RSG + EA FIN MP + D+
Sbjct: 557 CSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADAL 616
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LLS C+TY N +I E A ++ L PA YVLLSN+YA AG W + +R LM
Sbjct: 617 VWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMR 676
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+K L K G SW++V N +H F +P
Sbjct: 677 DKNLSKETGLSWMDVGNTIHEFRAGDTSHP 706
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 312/592 (52%), Gaps = 25/592 (4%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+ I K GR+ + F+ P ++ ++W A + + Q G +AL LF + + +
Sbjct: 9 TSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSR 68
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ TF++ ACA + + R G+ + + +G + + V NSLI + K AR V
Sbjct: 69 PDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+ M + VSW +L + G AR +FD MP++ E++W++MI+ Y Q G E
Sbjct: 129 FEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCL 188
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF++M S +P+ FS +++AL L+ G +H ++K G +
Sbjct: 189 GLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWD------------- 235
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
D VF+SI + VSWN+MI + G EA +F P++N VSW++
Sbjct: 236 -------DVMKVFESI---GILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTS 285
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY + + + F +M+ + P+ TF +VL A +S+A+L GK +HG II G
Sbjct: 286 MITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYG 345
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F V +G L + YAK GDI+ S F + K+ +SW M+ GL G+A +++ L+E
Sbjct: 346 FHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYE 405
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM + + P+++T + +L CSHSGL++KG F SM +Y + H C+VD+L R
Sbjct: 406 EMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRG 465
Query: 602 GRLSEAEDFIN--SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
G L++A + ++ S +++ +LL C + ++ + L + YVL
Sbjct: 466 GYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVL 525
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LSN+Y +G+W +A VRK MT+ G++K GCSW+EVRN+V F +P
Sbjct: 526 LSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHP 577
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 180/365 (49%), Gaps = 45/365 (12%)
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
H+ S I K+G + AR +FD M +D V+W
Sbjct: 4 HLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAW------------------------ 39
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+ M+A Y+Q G ++A LF M + +P+ F+ LSA A L LR GM
Sbjct: 40 -------NAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATLSACAGLGELRRGMK 92
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA V+ G + + + N+LID+Y KC R VF+ E + + VSW S++ Y
Sbjct: 93 IHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFE---EMSIMNEVSWCSLLFAYTS 149
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+G + A+ +FD MPK+ +++W+ +ISGY + +L +F +M P++ TFS++
Sbjct: 150 SGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSAL 209
Query: 458 LCASASVASLEKGKDLHGKIIKLGFP--YDVF--LG-------TALTDTYAKSGDIESSR 506
+ A + G +HG IIK G+ VF +G A+ D + K GD +
Sbjct: 210 VNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAF 269
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
VF P+KN +SWT M+ G A +G+ +++++ F +M + I P++ T +VL ACS
Sbjct: 270 LVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLA 329
Query: 567 LVDKG 571
+ G
Sbjct: 330 TLGHG 334
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 196/425 (46%), Gaps = 55/425 (12%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V N +I+ + + A+R+F+ M NEVSW +L+ + G + + F+ P
Sbjct: 106 LPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPK 165
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ I+W I G+ Q G L LF K+ E ++P++ TFS++ A E+ + G +
Sbjct: 166 KVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMM 225
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G I K+G+ D VF+ + VSW ++D +++GD
Sbjct: 226 HGFIIKSGW--------------------DDVMKVFESIGILTQVSWNAMIDAHMKIGDT 265
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EA +F PE+N VSW+ MI Y ++G+ E+A F +M +P+ F VL A
Sbjct: 266 HEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHAC 325
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+SL L G +H ++ G V + N L+++Y+KCG+ + F I+ KD +V
Sbjct: 326 SSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKD---LV 382
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWN+M+ G G++G +A EL++ EM+ SG
Sbjct: 383 SWNAMLFGLGMHGHATQALELYE-------------------------------EMVASG 411
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESS 505
P+K TF +L + +EKG+ L ++ + G + + D + G + +
Sbjct: 412 MKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQA 471
Query: 506 RRVFD 510
R + D
Sbjct: 472 RELVD 476
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 55/317 (17%)
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+H+ S I G++ A+ LFD MP ++ V+W+A+++ Y + +F+ M
Sbjct: 3 SHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHM 62
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK---- 498
++ P++ TF++ L A A + L +G +H +++ G + +G +L D Y K
Sbjct: 63 RIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSA 122
Query: 499 ---------------------------SGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
SG + +R VFD MP K EI+W +M+ G + G
Sbjct: 123 TSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCG 182
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGLVDKG----LKYFN 576
+ + LF++M + S+ P++ T +++ A H ++ G +K F
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFE 242
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
S+ + + N ++D + G EA P E + +W S+++G Y
Sbjct: 243 SIGILTQVSWNA-----MIDAHMKIGDTHEAFLVFQLAP-EKNVVSWTSMITG---YARN 293
Query: 637 QIAERAVKNLWKLAEEH 653
E+A+ K+ E H
Sbjct: 294 GHGEQALSFFVKMMENH 310
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/526 (33%), Positives = 299/526 (56%), Gaps = 11/526 (2%)
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C + R+G+S+ + K + + N LI + K ++ A+ FD + R++ SW
Sbjct: 21 CIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIRNIHSW 80
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY--S 311
IL + G +AR++FDEMP N VS++ +I+ + G E+ +FRQM +
Sbjct: 81 NTILASYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDL 140
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ + A L AL VH + IG+E ++ + NA++D Y KCG+
Sbjct: 141 LALDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASY 200
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+F + E+DV V+W SM+ Y ++++A +F MP +N +W+A+I+ +++K
Sbjct: 201 SIFSRMKERDV---VTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALINALVKNKY 257
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK----LGFPYDVF 487
+ +F +ML PN TF VL A A +A + KGK++HG II+ L FP +V+
Sbjct: 258 SNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFP-NVY 316
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ AL D Y+KSGD++S+R +F+ + +K+ +SW ++ G A++G +E++ F +M +
Sbjct: 317 VCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVG 376
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
I PN++T L+VL ACSH+GL +GL ME Y+I+P+ HY ++DM R RL+EA
Sbjct: 377 IRPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDIEPSLEHYAVMIDMFGRENRLAEA 436
Query: 608 EDFINSMP-FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
D I+ P W ++L C+ ++N +A RA + L+++ ++ YV+LSN++A+
Sbjct: 437 LDLISRAPNGSKHVGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAGRYVMLSNVFAA 496
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A RW+DA NVRKLM E+G +K S +E+RN H F + + + +
Sbjct: 497 ASRWMDAHNVRKLMEERGFKKEVAYSCIEIRNIRHKFVARDNSHSQ 542
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 199/395 (50%), Gaps = 43/395 (10%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +LH HLIKT + FDL + N +I+ +
Sbjct: 30 GMSLHSHLIKTAL-------------------------------SFDLFLANRLIDMYSK 58
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
++E AQ+ FD +P RN SW +++ + + G ++ F+ P N++S+ I F
Sbjct: 59 CNSMENAQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMPHPNIVSYNTLISSF 118
Query: 160 VQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+G E++ +F ++ + + +E+T SI CA + V G G E
Sbjct: 119 THHGLYVESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEF 178
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
++ VCN+++ K G+ D + S+F RM++RDVV+WT ++ + + L +A R+F MP
Sbjct: 179 NMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMP 238
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+N +W+ +I ++ Y EA LF+QM PN F VLSA A L + G
Sbjct: 239 VKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKE 298
Query: 338 VHAHVLKIGIE---KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+H +++ E +V++ NALIDLYSK G+ K R++F+ I+EKD VVSWNS+I G
Sbjct: 299 IHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLILEKD---VVSWNSLITG 355
Query: 395 YGLNGQMEEAKELFDNMP----KRNDVSWSAIISG 425
+ NG EA F M + N V++ A++S
Sbjct: 356 FAQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSA 390
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI + K G V+ + F ++V+SW + I GF QNG EAL F K+ E G++P
Sbjct: 320 ALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRP 379
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
N+VTF ++ AC+ GLS GL EK + SL
Sbjct: 380 NKVTFLAVLSACSHT-----GLSSEGLCILELMEKFYDIEPSL 417
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 195/618 (31%), Positives = 344/618 (55%), Gaps = 8/618 (1%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +I + G L +AQ+LFD MPERN SW A+I+ ++K + ++ F+ ++++
Sbjct: 450 NQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNLRQARALFDSAVCKDLV 509
Query: 151 SWTAAICGFVQ-NGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEINDFRLGLSVF 207
++ + + G+ + +G+ +AL F+++ + ++ +E T ++ A++ G +
Sbjct: 510 TYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLH 569
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLA-RSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K + V +SLI + K G A R + E D VS ++ G++
Sbjct: 570 SFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCREGEI 629
Query: 267 GEARRIF-DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
A +F E+ + + V+W+ MI+ + Q+GY EE+ +LF +M N F+ VLSA
Sbjct: 630 DVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSA 689
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++L++L+ G VHA+VLK + + FI + L+D+Y KC + V E + +V
Sbjct: 690 CSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAESVNS---ELRMQNV 746
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
S SMI GY G M EA++LFD++ ++N V W+A+ GY++ +Q + VF + +E
Sbjct: 747 YSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCEAVFELLSEYRKE 806
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
++P+ S++ A A A+L GK +H +++ G D L ++L D Y+K G I +
Sbjct: 807 AKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYA 866
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R+F + DK+ I + +M+ G A G+ E++ LF+EM K P+ +T +++L AC H
Sbjct: 867 ERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRHG 926
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV+ G +F+SM YNI P HY C++D+ R+ +L +A +F+ +P + D+ W +
Sbjct: 927 GLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLDAVIWGA 986
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
L+ C+ N ++A +A L + E+ + YV L+N+YA+ G W + +RK M K +
Sbjct: 987 FLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMGRIRKKMKGKEV 1046
Query: 686 RKSGGCSWVEVRNQVHFF 703
+K+ GCSWV V ++ H F
Sbjct: 1047 KKNAGCSWVFVESKFHVF 1064
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 236/488 (48%), Gaps = 39/488 (7%)
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
E+ + GL K+GF + + N LIT K G ++ A+ +FD M +R+V SW
Sbjct: 423 EMKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNA 482
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS-GYPEEAFRLFRQMTRYSFKP 314
I+ +++ +L +AR +FD ++ V+++ M++ Y +S GY +A F +M
Sbjct: 483 IIAAYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMI 542
Query: 315 NTSCFSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
F+++ L+ A L + G +H+ +LK + VF +++LID+YSKCG K+
Sbjct: 543 RIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACR 602
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQ 431
V+ E V VS N+M+ G+++ A +LF ++ND V+W+ +ISG++++
Sbjct: 603 VYYGCGE--VVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGY 660
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+ +F M N+ TF+SVL A +++ SL+ GK++H ++K + F+ +
Sbjct: 661 EEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSG 720
Query: 492 LTDTYAK-------------------------------SGDIESSRRVFDRMPDKNEISW 520
L D Y K G++ +R++FD + +KN + W
Sbjct: 721 LVDVYCKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVW 780
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T + G + + L E K + P+ L ++S++ AC+ + G K +S
Sbjct: 781 TALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPG-KQIHSYML 839
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
IK + + + +VDM S+ G + AE + + DS + +++G + E A
Sbjct: 840 RAGIKLDTKLTSSLVDMYSKCGSIIYAERIFREVT-DKDSIIYNIMIAGYAHHGWENEAV 898
Query: 641 RAVKNLWK 648
+ K + K
Sbjct: 899 QLFKEMVK 906
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 228/500 (45%), Gaps = 47/500 (9%)
Query: 22 ETCLCLLKDITSQNLVIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
E L + ++T++ VI G+ LH ++KT + + L+ MY EA +
Sbjct: 546 EFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYY 605
Query: 81 DLNG-FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE-VSWTALISGFMKHGRVEESM 138
D V N M+ A + G ++ A LF E+N+ V+W +ISGF+++G EES
Sbjct: 606 GCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEES- 664
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
LKLF+++ + V NE TF+S+ AC+ +
Sbjct: 665 ------------------------------LKLFVRMADEKVGWNEHTFASVLSACSNLR 694
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+LG V + K + +C+ L+ + K + A SV + ++V S T ++
Sbjct: 695 SLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAESVNSELRMQNVYSITSMIV 754
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ G++ EAR++FD + E+N V W+ + Y + E F L + + + P+
Sbjct: 755 GYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLI 814
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++ A A AL G +H+++L+ GI+ D ++++L+D+YSKCG +F +
Sbjct: 815 LISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAERIFREVT 874
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDL 434
+KD + +N MI GY +G EA +LF M K + +++ A++S +L
Sbjct: 875 DKD---SIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRHGGLVEL 931
Query: 435 VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTAL 492
F+ M I P ++ ++ L+K + KI I+L D + A
Sbjct: 932 GEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQL----DAVIWGAF 987
Query: 493 TDTYAKSGDIESSRRVFDRM 512
+ +G+ E +R+ D +
Sbjct: 988 LNACRINGNAELARKAEDEL 1007
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 164/401 (40%), Gaps = 76/401 (18%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F S + C ++ S L G+ +H +++K + ++ + L+ +Y
Sbjct: 680 EHTFASVLSAC----SNLRSLKL---GKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMR 732
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
A + +L ++ MI GN+ EA++LFD + E+N V WTAL G++K +
Sbjct: 733 YAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQ 792
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
E FE L + K E+ V P+ + SI A
Sbjct: 793 CEA----------------------------VFELLSEYRK--EAKV-PDVLILISIIGA 821
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CA G + + +AG + + +SL+ + K G + A
Sbjct: 822 CAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYA--------------- 866
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
RIF E+ +++ + +++MIA Y G+ EA +LF++M ++ FK
Sbjct: 867 ----------------ERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFK 910
Query: 314 PNTSCFSIVLSALASLKALRSGMHVH---AHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P+ F +LSA + G H ++ I E D + +IDLY + + D
Sbjct: 911 PDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYA--CMIDLYGRANQL-DK 967
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
L F + + V+ W + + +NG E A++ D +
Sbjct: 968 ALEFMRKIPIQLDAVI-WGAFLNACRINGNAELARKAEDEL 1007
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 307/578 (53%), Gaps = 68/578 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALIS +M G V + F + V+SW A I G V+NG++ AL++F ++ GV
Sbjct: 148 ALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGI 207
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T S+ ACA+ D G +V L+ G +V+V N+LI
Sbjct: 208 DRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALI---------------- 251
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEEAF 301
D++ + L +ARR+FD +++ VSW+ MI Y + EA
Sbjct: 252 ---------------DMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAI 296
Query: 302 RLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
L QM PN +LSA AS+ + + HA +++G++ D+ + ALID
Sbjct: 297 SLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDA 356
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y++CG+ K RL E+ +WN+ + GY ++G+ ++A EL
Sbjct: 357 YARCGKMKLMRLTL----ERGSWRAETWNAALSGYTVSGREKKAIEL------------- 399
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
F M+ P+ +T +S+L A A A L++GK++H ++ L
Sbjct: 400 ------------------FKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTL 441
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF + T L D Y+K+GD++++ +F +P+K+ ++WT ++ G + G+A+ +I L+
Sbjct: 442 GFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLY 501
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ M ++ PN +TI ++L+ACSH+G++D+G+K F M ++ + PNG HY+C+VDML R
Sbjct: 502 DRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGR 561
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+GR+ EA I MPFEP ++ W +LL C +KN + E A K L++L E+ YVLL
Sbjct: 562 AGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLL 621
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
NIYA+A RW D +VR++M E+GL K G S VE R+
Sbjct: 622 GNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARS 659
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 199/458 (43%), Gaps = 68/458 (14%)
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +TF KACA + R G +V AGF V N+LI++
Sbjct: 107 DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISM-------------- 152
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
++ GD+G A +F M R VSW+ +IA ++GY E A
Sbjct: 153 -----------------YMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALE 195
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F +M + + VL A A K L +G VH V G+ V + NALID+Y
Sbjct: 196 VFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYG 255
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC +D R VFD K VVSW +MIG Y LN + EA
Sbjct: 256 KCRSLEDARRVFDHC--KHDKDVVSWTAMIGAYVLNDRAFEA------------------ 295
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
++ +ML+SG PN T +L A AS+ S + K H I+LG
Sbjct: 296 -------------ISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLG 342
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D+ + TAL D YA+ G ++ R +R + E +W + G SG K++I LF+
Sbjct: 343 LKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFK 401
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M S+ P+ T+ S+L A + S + +G K + + T ++D+ S++
Sbjct: 402 RMIAESVRPDSATMASILPAYAESADLKEG-KNIHCFLLTLGFLRSTEIATGLIDVYSKA 460
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
G L A +P E D AW ++++G + + + A
Sbjct: 461 GDLDAAWALFQWLP-EKDVVAWTTIIAGYSIHGHARTA 497
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 151/349 (43%), Gaps = 42/349 (12%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYSFKPNTS 317
V+ G A + +MP+ VS+S + R Y G EA ++ M + +
Sbjct: 54 VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF----DHL 109
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
F A A L+ R G VH L G D ++ NALI +Y CG+
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGD----------- 158
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ A+ +F M R VSW+A+I+G +++ +
Sbjct: 159 -----------------------VGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALE 195
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
VF EM G +++T SVL A A L G+ +H + G V + AL D Y
Sbjct: 196 VFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYG 255
Query: 498 KSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-PNELTI 555
K +E +RRVFD DK+ +SWT M+ + A E+I+L +M + PN +T+
Sbjct: 256 KCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTM 315
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ +L AC+ S K K +++ +K + T ++D +R G++
Sbjct: 316 VYLLSACA-SMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKM 363
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 41/298 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI + + G+++ ER ++ +W AA+ G+ +G +A++LF +++ V+
Sbjct: 351 TALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVR 409
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T +SI A AE D + G ++ + GF + + LI + K G++D A ++
Sbjct: 410 PDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWAL 469
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F + ++DVV+WT I IA Y+ G+ A
Sbjct: 470 FQWLPEKDVVAWTTI-------------------------------IAGYSIHGHARTAI 498
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDL 360
L+ +M KPNT + +L A + + G+ V + + G+ + + L+D+
Sbjct: 499 LLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDM 558
Query: 361 YSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPK 413
+ G ++ RL+ D E + W +++G L+ +E AK LF P+
Sbjct: 559 LGRAGRIEEAHRLIQDMPFEPSTS---VWGALLGACVLHKNVEFGEVAAKRLFQLDPE 613
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 12/237 (5%)
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWS-AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
Y G+ A L MP+ VS+S +++ Y AV++ M + T
Sbjct: 55 YCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFDHL----T 110
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
F A A + G+ +H + + GF D ++ AL Y GD+ ++ VF M
Sbjct: 111 FPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMR 170
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++ +SW ++ G ++GYA+ ++ +F EM + + T++SVL AC+ + K L
Sbjct: 171 NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQA----KDLN 226
Query: 574 YFNSMEPIYNIKPNGRHYT---CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
++ + K G + ++DM + L +A + + D +W +++
Sbjct: 227 TGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMI 283
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 39/193 (20%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
+I+ + G+L+ A LF +PE++ V+WT +I+G+ HG ++ ++R
Sbjct: 453 LIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDR--------- 503
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
++ESG KPN VT +++ AC+ G+ VF +
Sbjct: 504 ----------------------MVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRN 541
Query: 213 A-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-WTVILDVF-----IEMGD 265
G + + L+ + + G ++ A + M S W +L +E G+
Sbjct: 542 VHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGE 601
Query: 266 LGEARRIFDEMPE 278
+ A+R+F PE
Sbjct: 602 VA-AKRLFQLDPE 613
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYL--------TTRLLIMYLGSRKSL--EANEI 78
KD+ + +I G ++HGH + +R + T ++Y S + E ++
Sbjct: 476 KDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV 535
Query: 79 VKDLNGFDLVVHN-----CMINANIQWGNLEEAQRLFDGMP-ERNEVSWTALISGFMKHG 132
KD+ ++ N C+++ + G +EEA RL MP E + W AL+ + H
Sbjct: 536 FKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHK 595
Query: 133 RVE 135
VE
Sbjct: 596 NVE 598
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 210/721 (29%), Positives = 353/721 (48%), Gaps = 112/721 (15%)
Query: 70 RKSLEANEIVKDLNGFDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNE----VSWTA 123
R++L+A +I + + L V + +INA +LE +++ M N +
Sbjct: 79 REALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNH 138
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
++S + K G ++E+ F+ P +NV+SWT+ I G+ + G A+ L++++L SG P+
Sbjct: 139 ILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
TF SI K+C+ ++DF+L + + K+ F + N+LI++ K ++ A +VF
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
R+ +D++SW MIA ++Q GY EA
Sbjct: 259 RIIIKDLISW-------------------------------GSMIAGFSQLGYELEALCH 287
Query: 304 FRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
FR+M S ++PN F SA + L G +H +K G+ D+F +L D+Y+
Sbjct: 288 FREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYA 347
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVS 418
KCG + R VF I + D +V+WN++I G+ +E+ F M NDV+
Sbjct: 348 KCGFLESARTVFYHIEKPD---LVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVT 404
Query: 419 WSAIISG---------------YLEHKQFDLVFAVFNEML-------------------- 443
+++ Y+ F+L V N +L
Sbjct: 405 VLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIG 464
Query: 444 -------------------LSGEI-------------PNKSTFSSVLCASASVASLEKGK 471
+GE+ P+ T ++VL +S +AS E G
Sbjct: 465 NKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGS 524
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H I+K G D+ + AL + Y K G +E +R++FD + + + ISW+ ++ G A++G
Sbjct: 525 QIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAG 584
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
KE+ LF M + PNE+T + +L ACSH G+V++GLK + +M+ Y I P H
Sbjct: 585 CGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHC 644
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+C+VD+L+R+G L AEDFI MPF PD W +LL+ CK + N ++ +RA +N+ K+
Sbjct: 645 SCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDP 704
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ A V+L NI+AS+G W D +R M + K G SW+E++++VH F + + +P
Sbjct: 705 SNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHP 764
Query: 712 K 712
+
Sbjct: 765 E 765
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 303/585 (51%), Gaps = 40/585 (6%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
R+P N + + ++ GF L+ + + P+ T + ACA D R
Sbjct: 70 RSP--NAFTCNTLLKAALRQGFPHLCFPLYASMPAA---PDTYTHPLLAAACAARGDVRE 124
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
GL V K GF ++ + N+L+ + G V AR VFD D VSW IL ++
Sbjct: 125 GLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYVR 184
Query: 263 MGDLGEARRIFDEMPE-------------------------------RNEVSWSVMIARY 291
GD+ +A ++F MPE R+ +W+ M++ +
Sbjct: 185 DGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSCF 244
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
++ EA +F M + + + V++A A +++G H V++ G+ V
Sbjct: 245 ERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRV 304
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ N LI +YS C + R +FD+ D H SWNSMI GY NG++E+AK LFD M
Sbjct: 305 NVQNVLIHMYSSCQDVVAARRLFDNGESLD--H-FSWNSMISGYLKNGRVEDAKALFDVM 361
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
P +++VSWSA+I+G + + Q VF+ M P+ T SV+ A +++++LE+GK
Sbjct: 362 PDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGK 421
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H I K + + LGT+L D Y K G +E++ VFD + +K W ++ GLA +G
Sbjct: 422 LVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNG 481
Query: 532 YAKESINLFEEMEKT-SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
S+++F EME T + PNE+T VL AC H GLV++G ++F M+ Y I PN RH
Sbjct: 482 LVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIRH 541
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
Y C+VD+L R+G + EAED I SMP PD AW +LL C + + ++ ER K L KL
Sbjct: 542 YGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKKLVKLD 601
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+H +LSNIYAS G W ++R M ++ + K GCS VE
Sbjct: 602 PDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVAGCSMVE 646
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 161/619 (26%), Positives = 266/619 (42%), Gaps = 94/619 (15%)
Query: 1 MKASLRSLFSINPETSFNSYIE--------TCLCLLKDITSQNLVIQGRALHGHLIKTGI 52
+KA+LR F P F Y T L ++ V +G +H H +K G
Sbjct: 81 LKAALRQGF---PHLCFPLYASMPAAPDTYTHPLLAAACAARGDVREGLQVHSHSVKHGF 137
Query: 53 HKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG 112
YL L+ MY A + +D V N ++ ++ G++E+A ++F
Sbjct: 138 SDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVKVFTR 197
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
MPER+ + +A+++ F + G VEE+ F+ ++ +WTA + F +N EAL +F
Sbjct: 198 MPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVF 257
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
+ E G +E S+ ACA+ + G GL+ +AG V+V N LI +
Sbjct: 258 SDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSC 317
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
+V AR +FD E D SW ++ +++ G + +A+ +FD MP+++ VSWS MIA
Sbjct: 318 QDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCV 377
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+ EA +F M + KP+ V+SA ++L AL G VH ++ K +
Sbjct: 378 HNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIV 437
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
+ +LID+Y KCG + VFD + EK WN++I G +NG
Sbjct: 438 LGTSLIDMYMKCGCMEAALEVFDMLEEKGTP---CWNAVIVGLAMNG------------- 481
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGK 471
L + D+ F+EM +G +PN+ TF+ VL A
Sbjct: 482 --------------LVTRSLDM----FSEMEATGTAVPNEITFTGVLSACR--------- 514
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-----SWTVMVRG 526
HG G +E R+ F M +K +I + MV
Sbjct: 515 --HG------------------------GLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDL 548
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP------ 580
L +GY +E+ ++ + M + P +L + S + ++ K ++P
Sbjct: 549 LGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQ 608
Query: 581 --IYNIKPNGRHYTCVVDM 597
+ NI + + CV D+
Sbjct: 609 TMLSNIYASEGMWQCVKDL 627
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 167/386 (43%), Gaps = 41/386 (10%)
Query: 37 VIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
VIQ G HG +++ G+ + L+ MY + + A + + D N MI+
Sbjct: 284 VIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMIS 343
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
++ G +E+A+ LFD MP+++ VSW+A+I+
Sbjct: 344 GYLKNGRVEDAKALFDVMPDKDNVSWSAMIA----------------------------- 374
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
G V N S EAL +F + +KP++VT S+ AC+ ++ G V I K +
Sbjct: 375 --GCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQY 432
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ + SLI + +K G ++ A VFD +E++ W ++ G + + +F E
Sbjct: 433 NITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSE 492
Query: 276 MPER-----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASL 329
M NE++++ +++ G EE + F+ M +Y PN + ++ L
Sbjct: 493 MEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRA 552
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+R + + + + DV AL+ K G+++ G V +V+ D H
Sbjct: 553 GYVREAEDM---IQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQT 609
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRN 415
+ Y G + K+L +M +++
Sbjct: 610 MLSNIYASEGMWQCVKDLRGSMKQQH 635
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 210/721 (29%), Positives = 353/721 (48%), Gaps = 112/721 (15%)
Query: 70 RKSLEANEIVKDLNGFDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNE----VSWTA 123
R++L+A +I + + L V + +INA +LE +++ M N +
Sbjct: 79 REALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNH 138
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
++S + K G ++E+ F+ P +NV+SWT+ I G+ + G A+ L++++L SG P+
Sbjct: 139 ILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
TF SI K+C+ ++DF+L + + K+ F + N+LI++ K ++ A +VF
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
R+ +D++SW MIA ++Q GY EA
Sbjct: 259 RIIIKDLISW-------------------------------GSMIAGFSQLGYELEALCH 287
Query: 304 FRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
FR+M S ++PN F SA + L G +H +K G+ D+F +L D+Y+
Sbjct: 288 FREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYA 347
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVS 418
KCG + R VF I + D +V+WN++I G+ +E+ F M NDV+
Sbjct: 348 KCGFLESARTVFYHIEKPD---LVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVT 404
Query: 419 WSAIISG---------------YLEHKQFDLVFAVFNEML-------------------- 443
+++ Y+ F+L V N +L
Sbjct: 405 VLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIG 464
Query: 444 -------------------LSGEI-------------PNKSTFSSVLCASASVASLEKGK 471
+GE+ P+ T ++VL +S +AS E G
Sbjct: 465 NKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGS 524
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H I+K G D+ + AL + Y K G +E +R++FD + + + ISW+ ++ G A++G
Sbjct: 525 QIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAG 584
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
KE+ LF M + PNE+T + +L ACSH G+V++GLK + +M+ Y I P H
Sbjct: 585 CGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHC 644
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+C+VD+L+R+G L AEDFI MPF PD W +LL+ CK + N ++ +RA +N+ K+
Sbjct: 645 SCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDP 704
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ A V+L NI+AS+G W D +R M + K G SW+E++++VH F + + +P
Sbjct: 705 SNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHP 764
Query: 712 K 712
+
Sbjct: 765 E 765
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/506 (35%), Positives = 274/506 (54%), Gaps = 11/506 (2%)
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL----GEA 269
G + V +SL+ L+ G ARSV D M R VV W+ ++ GD G
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R+ + E N ++W+ +++ N+SG +A +M F P+ + S LSA+ +
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ G +H +V+K G D ++ ALID+Y KCG + VFD DVA S N
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVA---SCN 226
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+++ G N Q+ EA LF R N VSW++I++ +++ + +F EM
Sbjct: 227 ALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSE 286
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN T VL A A++A+L G+ H ++ GF +D+++G+AL D YAK G + +
Sbjct: 287 GIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDA 346
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R +F+ MP +N +SW M+ G A G A+ ++ LF M+ + P+ +T VL ACS +
Sbjct: 347 RMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQA 406
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G ++G YFN M+ + I P HY C+V +L R+G+L +A D IN MPFEPD W S
Sbjct: 407 GWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGS 466
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL C+ + N +AE A +NL++L E+ YVLLSNIYAS W +R +M GL
Sbjct: 467 LLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGL 526
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNP 711
+K GCSW+E++N+VH +P
Sbjct: 527 KKEKGCSWIEIKNKVHMLLAGDSSHP 552
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 204/437 (46%), Gaps = 43/437 (9%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-- 143
D V + +++A +++G +A+ + DGMP R V W+ALI+ HG E + ER
Sbjct: 54 DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113
Query: 144 --NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
NVI+W + G ++G + +A+ +++ G P+ S A ++ D
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVA 173
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + G + KAG V +LI + K G D VFD DV S ++
Sbjct: 174 VGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLS 233
Query: 262 EMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ EA R+F E R N VSW+ ++A Q+G EA LFR+M +PN+
Sbjct: 234 RNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSV 293
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
VL A A++ AL G H L+ G D+++ +AL+D+Y+KCG +D R++F+++
Sbjct: 294 TIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM 353
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
++ VVSWN+MIGGY ++G+ E A LF +M
Sbjct: 354 PYRN---VVSWNAMIGGYAMHGEAENAVRLFRSMQS------------------------ 386
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTY 496
S E P+ TF+ VL A + E+G+ ++ K G + +
Sbjct: 387 -------SKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLL 439
Query: 497 AKSGDIESSRRVFDRMP 513
++G ++ + + ++MP
Sbjct: 440 GRAGKLDDAYDIINQMP 456
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 176/402 (43%), Gaps = 52/402 (12%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C L + V G LHG+++K G + + T L+ MY K A+EIV
Sbjct: 161 CALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMY---GKCGRADEIV------ 211
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE--- 142
R+FD + S AL++G ++ +V E++ F
Sbjct: 212 ----------------------RVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFV 249
Query: 143 -RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
R NV+SWT+ + VQNG EA+ LF ++ G++PN VT + A A I
Sbjct: 250 GRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALM 309
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G S + GF + V ++L+ + K G V AR +F+ M R+VVSW ++ +
Sbjct: 310 HGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYA 369
Query: 262 EMGDLGEARRIFDEMPERNE----VSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNT 316
G+ A R+F M E V+++ ++ +Q+G+ EE F +M ++ P
Sbjct: 370 MHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRM 429
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK-DGRLVFD 375
++ +++ L L + + ++ E D I +L+ G + G +V
Sbjct: 430 EHYACMVTLLGRAGKLDDAYDI---INQMPFEPDGCIWGSLL------GSCRVHGNVVLA 480
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+ +++ + N+ G Y L + +K+++D + + D+
Sbjct: 481 EVAAENLFQLEPENA--GNYVLLSNIYASKKMWDGVNRLRDM 520
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C+L + ++ GR+ H ++ G H + Y+ + L+ MY + +A I + +
Sbjct: 294 TIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM 353
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE----VSWTALISGFMKHGRVEESM 138
++V N MI G E A RLF M E V++T ++ + G EE
Sbjct: 354 PYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGR 413
Query: 139 WYFERNPFQNVIS 151
YF ++ IS
Sbjct: 414 SYFNEMQHKHGIS 426
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 210/691 (30%), Positives = 335/691 (48%), Gaps = 117/691 (16%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKE--RYLTTRLLIMYLGSRKSLEANEIVKDLN 83
CL + N I + + LI + HK + + RLL++ L +
Sbjct: 6 CLASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGL-------------QFS 52
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF + +I+A+ +G++ A+++FD +P W A+I G Y
Sbjct: 53 GFLITK---LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG------------YSRN 97
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
N FQ +AL ++ + + V P+ TF + KAC+ ++ ++G
Sbjct: 98 NHFQ-------------------DALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V +F+ GF+ V V N LI L K + AR+VF+ +
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----------------- 181
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
+PER VSW+ +++ Y Q+G P EA +F QM + KP+ VL
Sbjct: 182 ------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 324 SALASLKALRSGMHVHAHVLKIG--IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+A L+ L+ G +HA V+K+G IE D+ IS L +Y+KCG
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCG---------------- 271
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
Q+ AK LFD M N + W+A+ISGY ++ +F+E
Sbjct: 272 ------------------QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M+ P+ + +S + A A V SLE+ + ++ + + + DVF+ +AL D +AK G
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+E +R VFDR D++ + W+ M+ G G A+E+I+L+ ME+ + PN++T L +L A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+HSG+V +G +FN M + I P +HY CV+D+L R+G L +A + I MP +P
Sbjct: 434 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LLS CK +++ ++ E A + L+ + + YV LSN+YA+A W VR M
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
EKGL K GCSWVEVR ++ F +P+
Sbjct: 553 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/568 (33%), Positives = 312/568 (54%), Gaps = 52/568 (9%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W A I + EA+ L +LE+G ++ T S + KAC+ + + G+ + GL+
Sbjct: 95 WNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGLLK 154
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K F + + N LI+ +K G + A VFDRM KRD VS+ ++D +++ G + AR
Sbjct: 155 KLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARV 214
Query: 272 IFDEMP--ERNEVSWSVMIARYNQSGYPEE----AFRLFRQMTRYSFKPNTSCFSIVLSA 325
+FD +P ERN +SW+ +I Y QS E+ A++LF +M
Sbjct: 215 VFDCIPLEERNLISWNSLIRGYAQS---EDGILVAWQLFAKMP----------------- 254
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
E+D+ N++ID KCG +D + +FD + +D+
Sbjct: 255 ----------------------ERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDI--- 289
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW +MI GY NG+++ A+ LFD MP+R+ V+++A++ GY+++ +F M
Sbjct: 290 VSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSD 349
Query: 446 GE-IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G + + +T L A A + ++KG +H I ++GF D LG AL D Y+K G IE+
Sbjct: 350 GNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIEN 409
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ VF+ + +K+ W ++ GLA G + + + EME+ + P+++T + +L AC H
Sbjct: 410 AMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGH 469
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+GLV +G+ F M ++ ++P +HY C+VD+L R+G + EA++F+ MPFEP+ W
Sbjct: 470 AGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWR 529
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
SLLS CKT+++ + + +NL +L P+ YVL SN+YA G+W D VR +M +K
Sbjct: 530 SLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKN 589
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
L+K GCSW+E+ V+ FF + +P+
Sbjct: 590 LKKIPGCSWIELEGHVYAFFVQDKSHPQ 617
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 239/505 (47%), Gaps = 91/505 (18%)
Query: 70 RKSLEANEIVKDLN-GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
++ ++ + ++K L G DL + NC+I+ ++ G L A ++FD MP+R+ VS+ ++I G+
Sbjct: 144 KEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGY 203
Query: 129 MKHGRVEESMWYFERNPFQ--NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
+K GR++ + F+ P + N+ISW + I G+ Q+
Sbjct: 204 VKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQS------------------------ 239
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
G+ V +F E+ + NS+I +K G ++ A+ +FDRM
Sbjct: 240 --------------EDGILVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMP 285
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
RD+VSW ++D + + G + AR +FDEMPER+ V+++ M+ Y Q+GY EA +F
Sbjct: 286 NRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYG 345
Query: 307 M-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M + +F + + I LSA+A L + G+ +H + +IG D + ALID+YSKCG
Sbjct: 346 MQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCG 405
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
++ +VF++I EK V H WN++IGG ++G E
Sbjct: 406 SIENAMMVFENIKEKSVDH---WNAIIGGLAIHGLGE----------------------- 439
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK---DLHGKIIKLGF 482
L F EM P+ TF +L A +++G +L ++ K+
Sbjct: 440 --------LAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEP 491
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFE 541
+ + D ++G IE ++ + MP + N++ W R L + ES N+ +
Sbjct: 492 KLQHY--GCMVDILGRAGHIEEAKNFVEEMPFEPNDVIW----RSLLSACKTHESFNVGQ 545
Query: 542 E-----MEKTSITPNELTILSVLFA 561
M S +P+ + S ++A
Sbjct: 546 PVAENLMRLDSPSPSSYVLASNMYA 570
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 169/392 (43%), Gaps = 74/392 (18%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL+ N MI+ ++ G +E+AQ LFD MP R+ VSW +I G+ K+GRV+ + F+ P
Sbjct: 257 DLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMP 316
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGL 204
++V+++ A + G+VQNG+ EAL +F + G + T A A++ G+
Sbjct: 317 ERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGV 376
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++ I + GF + +LI + K G ++ A VF+ ++++ V W I
Sbjct: 377 AIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAI-------- 428
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
I G E AF +M R +P+ F +L+
Sbjct: 429 -----------------------IGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLN 465
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI--VEKDV 382
A HA G K+G + F+ + V K
Sbjct: 466 ACG-----------HA------------------------GLVKEGMMCFELMRRVHKVE 490
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+ + M+ G G +EEAK + MP + NDV W +++S H+ F++ V E
Sbjct: 491 PKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQPV-AE 549
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
L+ + P+ S++ + AS A L K D+
Sbjct: 550 NLMRLDSPSPSSY---VLASNMYAGLGKWNDV 578
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 295/564 (52%), Gaps = 65/564 (11%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N+ W I G V N +A++ + + G PN TF + KACA + D +LG+ +
Sbjct: 76 NIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIH 135
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
L+ K GF+ V V SL+ L K G ++
Sbjct: 136 TLVVKGGFDCDVFVKTSLVCLYAKCGYLE------------------------------- 164
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A ++FD++P++N VSW+ +I+ Y G EA +FR++ + P++ VLSA
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L L SG +H ++++G+ ++VF+ +L+D+Y+KCG
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCG---------------------- 262
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
ME+A+ +FD MP+++ VSW A+I GY + +F +M
Sbjct: 263 ------------NMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENV 310
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ T VL A A + +LE G+ + G + + F Y+ LGTAL D YAK G + +
Sbjct: 311 KPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWE 370
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF M +K+ + W ++ GLA +GY K S LF ++EK I P+ T + +L C+H+GL
Sbjct: 371 VFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGL 430
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
VD+G +YFNSM +++ P+ HY C+VD+L R+G L EA I +MP E ++ W +LL
Sbjct: 431 VDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
C+ +++ Q+AE A+K L +L + YVLLSNIY++ +W +A VR M EK ++K
Sbjct: 491 GACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQK 550
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNP 711
GCSW+EV VH F ++P
Sbjct: 551 PPGCSWIEVDGIVHEFLVGDKYHP 574
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 190/385 (49%), Gaps = 56/385 (14%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+IL + D R +F ++ + N W+ MI + ++A + M F P
Sbjct: 51 MILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLP 110
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N F VL A A L L+ G+ +H V+K G + DVF+ +L+ LY+KCG +D VF
Sbjct: 111 NNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVF 170
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D I +K+ VVSW ++I GY G+ EA ++F + + N
Sbjct: 171 DDIPDKN---VVSWTAIISGYIGVGKFREAIDMFRRLLEMNLA----------------- 210
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
P+ T VL A + L G+ +H I+++G +VF+GT+L D
Sbjct: 211 --------------PDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVD 256
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G++E +R VFD MP+K+ +SW M++G A +G KE+I+LF +M++ ++ P+ T
Sbjct: 257 MYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYT 316
Query: 555 ILSVLFACSH----------SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
++ VL AC+ SGLVD+ +N P+ T ++D+ ++ G +
Sbjct: 317 VVGVLSACARLGALELGEWVSGLVDRNEFLYN---PVLG--------TALIDLYAKCGSM 365
Query: 605 SEAEDFINSMPFEPDSNAWASLLSG 629
S A + M E D W +++SG
Sbjct: 366 SRAWEVFKGMK-EKDRVVWNAIISG 389
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 178/405 (43%), Gaps = 67/405 (16%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+L+ + K G +E++ F+ P +NV+SWTA I G++ G EA+ +F +LLE +
Sbjct: 151 TSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLA 210
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T + AC ++ D G + I + G ++V V SL+ + K G ++ ARSV
Sbjct: 211 PDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSV 270
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M ++D+VSW MI Y +G P+EA
Sbjct: 271 FDGMPEKDIVSW-------------------------------GAMIQGYALNGLPKEAI 299
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF QM R + KP+ VLSA A L AL G V V + + + ALIDLY
Sbjct: 300 DLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLY 359
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG VF + EKD V WN++I G +NG ++
Sbjct: 360 AKCGSMSRAWEVFKGMKEKD---RVVWNAIISGLAMNGYVK------------------- 397
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-L 480
+ F +F ++ G P+ +TF +LC +++G+ + +
Sbjct: 398 ------------ISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFF 445
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ + D ++G ++ + ++ MP + N I W ++
Sbjct: 446 SLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 140/280 (50%), Gaps = 20/280 (7%)
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
LF + + N W+ +I G + + FD + M G +PN TF VL A A +
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L+ G +H ++K GF DVF+ T+L YAK G +E + +VFD +PDKN +SWT ++ G
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG---LKYFNSMEPIYN 583
G +E+I++F + + ++ P+ TI+ VL AC+ G ++ G K M + N
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ T +VDM ++ G + +A + MP E D +W +++ G Y + + A+
Sbjct: 248 VFVG----TSLVDMYAKCGNMEKARSVFDGMP-EKDIVSWGAMIQG---YALNGLPKEAI 299
Query: 644 KNLWKLAEEH--PAGYVLLSNIYASA-------GRWIDAM 674
++ E+ P Y ++ + A A G W+ +
Sbjct: 300 DLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGL 339
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 177/423 (41%), Gaps = 64/423 (15%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +H ++K G + ++ T L+ +Y +A+++ D+ ++V +I+ I
Sbjct: 131 GVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIG 190
Query: 100 WGNLEEAQRLFDGMPE---------------------------------------RNEVS 120
G EA +F + E RN
Sbjct: 191 VGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFV 250
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
T+L+ + K G +E++ F+ P ++++SW A I G+ NG EA+ LFL++ V
Sbjct: 251 GTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENV 310
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP+ T + ACA + LG V GL+ + F + + +LI L K G + A
Sbjct: 311 KPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWE 370
Query: 241 VFDRMEKRDVVSWTVILD-------VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
VF M+++D V W I+ V I G G+ ++ + P+ N ++ ++
Sbjct: 371 VFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIK-PDGN--TFIGLLCGCTH 427
Query: 294 SGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKD 350
+G +E R F M R +S P+ + ++ L R+G+ AH L + +E +
Sbjct: 428 AGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLG-----RAGLLDEAHQLIRNMPMEAN 482
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+ AL+ C +D +L + K + + WNS G Y L + A +D
Sbjct: 483 AIVWGALL---GACRIHRDTQLA--ELALKQLIELEPWNS--GNYVLLSNIYSANLKWDE 535
Query: 411 MPK 413
K
Sbjct: 536 AAK 538
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ G +D +L + D +R +F ++ N W M+RGL + ++I
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
+ M PN T VL AC+ + G+K +++ + T +V +
Sbjct: 99 FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVK-IHTLVVKGGFDCDVFVKTSLVCLY 157
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ G L +A + +P + + +W +++SG
Sbjct: 158 AKCGYLEDAHKVFDDIP-DKNVVSWTAIISG 187
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 203/748 (27%), Positives = 349/748 (46%), Gaps = 110/748 (14%)
Query: 5 LRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
L+ L P+ Y++ LL+ + G+ +H H+++ G+ Y+T LL
Sbjct: 16 LQYLHRKGPQVDSYDYVK----LLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLK 71
Query: 65 MYLGSRKSLEANEIVKDLN----------------------GFDL--------------- 87
+Y EA ++ + F+L
Sbjct: 72 LYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFT 131
Query: 88 ---VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
++ C A + WG + + G+ V ALIS + K G V ++ F+
Sbjct: 132 FVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVG-NALISMYAKCGSVRDARRVFDAM 190
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
++ +SWT + ++G+ E+LK + +L+ V+P+ +T+ ++ AC + G
Sbjct: 191 ASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGK 250
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I ++ + V V +L + +++ G
Sbjct: 251 QIHAHIVESEYHSDVRVSTALTKM-------------------------------YMKCG 279
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+AR +F+ + R+ ++W+ MI + SG EEA F +M P+ + ++ VLS
Sbjct: 280 AFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLS 339
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A L G +HA K G+ DV NALI++YSK G
Sbjct: 340 ACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAG------------------- 380
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
M++A+++FD MPKR+ VSW+ ++ Y + Q F F +ML
Sbjct: 381 ---------------SMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ 425
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G NK T+ VL A ++ +L+ GK++H +++K G D+ + AL Y K G +E
Sbjct: 426 QGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVED 485
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ RVF+ M ++ ++W ++ GL ++G E++ +E M+ + PN T ++VL AC
Sbjct: 486 AIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRV 545
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
LV++G + F M Y I P +HY C+VD+L+R+G L EAED I ++P +P + W
Sbjct: 546 CNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWG 605
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL+ C+ + N +I ERA ++ KL ++ YV LS IYA+AG W D +RK M E+G
Sbjct: 606 ALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERG 665
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K G SW+E+ +VH F + +P+
Sbjct: 666 VKKEPGRSWIEIAGEVHSFVARDQSHPR 693
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 197/621 (31%), Positives = 338/621 (54%), Gaps = 12/621 (1%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +I+ G L+EA +LFD MP N SW A+I ++K + ++ F+ ++++
Sbjct: 22 NQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNLTQARALFDSASHRDLV 81
Query: 151 SWTAAICGFV-QNGFSFEALKLFLKLLES--GVKPNEVTFSSICKACAEINDFRLGLSVF 207
S+ + + +V +G+ EAL LF ++ + + +E+T +++ A++ G +
Sbjct: 82 SYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNMLNLAAKLRVLCYGKQMH 141
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDL 266
+ K + +SLI + K G A ++F E D+VS ++ G +
Sbjct: 142 SYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVDLVSKNAMVAACCREGKM 201
Query: 267 GEARRIFDEMPE-RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
A +F + PE ++ VSW+ +IA Y+Q+GY E++ F +M N + VL+A
Sbjct: 202 DMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIENGIDFNEHTLASVLNA 261
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++LK + G VHA VLK G + FIS+ ++D YSKCG + LV+ I K V
Sbjct: 262 CSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNIRYAELVYAKIGIKSPFAV 321
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
S +I Y G M EA+ LFD++ +RN V W+A+ SGY++ +Q + VF +F E
Sbjct: 322 AS---LIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQQCEAVFKLFREFRTK 378
Query: 446 -GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+P+ S+L A A A L GK +H I+++ F D L ++L D Y+K G++
Sbjct: 379 EALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDKKLLSSLVDMYSKCGNVAY 438
Query: 505 SRRVFDRMPD--KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ ++F + D ++ I + V++ G A G+ ++I LF+EM S+ P+ +T +++L AC
Sbjct: 439 AEKLFRLVTDSDRDAILYNVIIAGYAHHGFENKAIELFQEMLNKSVKPDAVTFVALLSAC 498
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
H GLV+ G ++F SME YN+ P HY C+VDM R+ +L +A +F+ +P + D+
Sbjct: 499 RHRGLVELGEQFFMSMEH-YNVLPEIYHYACMVDMYGRANQLEKAVEFMRKIPIKIDATI 557
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W + L+ C+ + + ++A + L K+ ++ + YV L+N YA+ G+W + +RK M
Sbjct: 558 WGAFLNACQMSSDAALVKQAEEELLKVEADNGSRYVQLANAYAAKGKWDEMGRIRKKMRG 617
Query: 683 KGLRKSGGCSWVEVRNQVHFF 703
+K GCSW+ V N +H F
Sbjct: 618 HEAKKLAGCSWIYVENGIHVF 638
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 214/433 (49%), Gaps = 39/433 (9%)
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K+G + CN LI L G + A +FD M +V SW I+ +I+ +L +AR
Sbjct: 11 KSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNLTQARA 70
Query: 272 IFDEMPERNEVSWSVMIARYNQS-GYPEEAFRLFRQM--TRYSFKPNTSCFSIVLSALAS 328
+FD R+ VS++ +++ Y S GY EA LF +M R + + + +L+ A
Sbjct: 71 LFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNMLNLAAK 130
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L+ L G +H++++K + F ++LID+YSKCG ++ +F S E + +VS
Sbjct: 131 LRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDE--MVDLVSK 188
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
N+M+ G+M+ A +F P+ D VSW+ +I+GY ++ + F EM+ +G
Sbjct: 189 NAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIENGI 248
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE---- 503
N+ T +SVL A +++ + GK +H ++K G+ + F+ + + D Y+K G+I
Sbjct: 249 DFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNIRYAEL 308
Query: 504 ---------------------------SSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
++R+FD + ++N + WT + G +S +
Sbjct: 309 VYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQQCEAV 368
Query: 537 INLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
LF E K ++ P+ + I+S+L AC+ + G K ++ K + + + +V
Sbjct: 369 FKLFREFRTKEALVPDAMIIVSILGACAIQADLSLG-KQIHAYILRMRFKVDKKLLSSLV 427
Query: 596 DMLSRSGRLSEAE 608
DM S+ G ++ AE
Sbjct: 428 DMYSKCGNVAYAE 440
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 217/461 (47%), Gaps = 38/461 (8%)
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
L +L ++ G + + DL+ F L + +I+ + G +EA LF E
Sbjct: 127 LAAKLRVLCYGKQMHSYMVKTANDLSKFAL---SSLIDMYSKCGCFQEACNLFGSCDEMV 183
Query: 118 E-VSWTALISGFMKHGRVEESMWYFERNP-FQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+ VS A+++ + G+++ ++ F +NP ++ +SW I G+ QNG+ ++L F+++
Sbjct: 184 DLVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEM 243
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
+E+G+ NE T +S+ AC+ + +LG SV + K G+ + + + ++ K G +
Sbjct: 244 IENGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNI 303
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
A V+ ++ + + ++ + G++ EA+R+FD + ERN V W+ + + Y +S
Sbjct: 304 RYAELVYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQ 363
Query: 296 YPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
E F+LFR+ T+ + P+ +L A A L G +HA++L++ + D +
Sbjct: 364 QCEAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDKKLL 423
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
++L+D+YSKCG +F + + D ++ +N +I GY +G +A EL
Sbjct: 424 SSLVDMYSKCGNVAYAEKLFRLVTDSDRDAIL-YNVIIAGYAHHGFENKAIEL------- 475
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
F EML P+ TF ++L A +E G+
Sbjct: 476 ------------------------FQEMLNKSVKPDAVTFVALLSACRHRGLVELGEQFF 511
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+ +++ + D Y ++ +E + ++P K
Sbjct: 512 MSMEHYNVLPEIYHYACMVDMYGRANQLEKAVEFMRKIPIK 552
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 158/357 (44%), Gaps = 70/357 (19%)
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H +K G+ +F N LI LYS G ++ +FD + + V SWN++I Y
Sbjct: 6 HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPN---VFSWNAIIMAYIKA 62
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLSGEI--PNKSTFS 455
+ +A+ LFD+ R+ VS+++++S Y+ ++ +F M + + ++ T +
Sbjct: 63 HNLTQARALFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLT 122
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF---DRM 512
++L +A + L GK +H ++K F ++L D Y+K G + + +F D M
Sbjct: 123 NMLNLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEM 182
Query: 513 PD------------------------------KNEISWTVMVRGLAESGYAKESINLFEE 542
D K+ +SW ++ G +++GY ++S+ F E
Sbjct: 183 VDLVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVE 242
Query: 543 MEKTSITPNELTILSVLFACS-----------HSGLVDKGL---KYFNS-MEPIYNIKPN 587
M + I NE T+ SVL ACS H+ ++ KG ++ +S + Y+ N
Sbjct: 243 MIENGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGN 302
Query: 588 GRHYTCV---------------VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
R+ V + S G ++EA+ +S+ E +S W +L SG
Sbjct: 303 IRYAELVYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSL-LERNSVVWTALCSG 358
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/626 (31%), Positives = 326/626 (52%), Gaps = 74/626 (11%)
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
V + A I F Q G A++L +S ++ T+SS+ + CA + F G V
Sbjct: 64 HQVTDYNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDGKKV 121
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+I ++ L++ G++ R VFD MEK++V W ++ + ++GD
Sbjct: 122 HSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDF 181
Query: 267 GE--------------------ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
E A +FD++ +R+ +SW+ MI+ Y +G E +++Q
Sbjct: 182 KESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQ 241
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M + + VL A+ L G VH+ +K E+ + SN L+D+YSKCG+
Sbjct: 242 MMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGD 301
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR------------ 414
VF+ + E++V VSW SMI GY +G+ + A +L M K
Sbjct: 302 LDGALRVFEKMGERNV---VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSI 358
Query: 415 ---------------------------NDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-- 445
N +A++ Y + + +VF+ M++
Sbjct: 359 LHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI 418
Query: 446 -------GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
GE+ P+ T + VL A AS+++LE+GK++HG I++ G+ D + AL D Y
Sbjct: 419 ISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G + +R +FD +P K+ +SWTVM+ G GY E+I F EM I P+E++ +S
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
+L+ACSHSGL+++G ++F M+ +NI+P HY C+VD+LSR+G LS+A +FI ++P
Sbjct: 539 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIA 598
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
PD+ W +LL GC+ Y + ++AE+ + +++L E+ YVLL+NIYA A +W + +R
Sbjct: 599 PDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLR 658
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFF 703
+ + ++GLRK+ GCSW+E++ +V+ F
Sbjct: 659 EKIGKQGLRKNPGCSWIEIKGKVNLF 684
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 210/484 (43%), Gaps = 106/484 (21%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE---------RNP------ 145
G+L+E +R+FD M ++N W ++S + K G +ES+ F+ + P
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFEL 207
Query: 146 -----FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
++VISW + I G+V NG + L ++ +++ G+ + T S+ CA
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG +V L K+ FE+ ++ N+L+ + K G++D A VF++M +R+VVSWT ++ +
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 261 IEMGDLGEARRIFDEMP---------------------------------------ERNE 281
G A ++ +M E N
Sbjct: 328 TRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNL 387
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYS----------FKPNTSCFSIVLSALASLKA 331
+ ++ Y + G E A +F M KP++ + VL A ASL A
Sbjct: 388 FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSA 447
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G +H ++L+ G D ++NAL+DLY KCG RL+FD I KD +VSW M
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD---LVSWTVM 504
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GYG++G EA A FNEM +G P++
Sbjct: 505 IAGYGMHGYGNEA-------------------------------IATFNEMRDAGIEPDE 533
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESSRRVF 509
+F S+L A + LE+G I+K F + L + D +++G++ +
Sbjct: 534 VSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFI 592
Query: 510 DRMP 513
+ +P
Sbjct: 593 ETLP 596
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 208/541 (38%), Gaps = 146/541 (26%)
Query: 13 PETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLG---- 68
PE++F + + C +D+ S N +I G +G ER L +MYLG
Sbjct: 201 PESAFELFDKLCD---RDVISWNSMISGYVSNGL-------TERGLGIYKQMMYLGIDVD 250
Query: 69 ------------SRKSLEANEIVKDL---NGFDLVVH--NCMINANIQWGNLEEAQRLFD 111
+ +L + V L + F+ ++ N +++ + G+L+ A R+F+
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
M ERN VSWT++I+G+ + GR S A+KL
Sbjct: 311 KMGERNVVSWTSMIAGYTRDGR-------------------------------SDGAIKL 339
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
++ + GVK + V +SI ACA G V I E ++ VCN+L+ + K
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVIL---------------------------------- 257
G ++ A SVF M +D++SW ++
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 258 ---------------DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D++++ G LG AR +FD +P ++ VSW+VMIA Y GY EA
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F +M +P+ F +L A + H+ +L+ G + N
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACS-----------HSGLLEQGWRFFYIMKN------- 561
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSA 421
D +E + H + M+ G + +A E + +P D + W A
Sbjct: 562 ------------DFNIEPKLEH---YACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
++ G + +L V E + E N + + A E+ K L KI K G
Sbjct: 607 LLCGCRNYHDIELAEKV-AERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQG 665
Query: 482 F 482
Sbjct: 666 L 666
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 31/307 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY-----LGSRKSLEANEIVKDLNGFDLVVHN-- 91
G+ +H ++ + ++ L+ MY + + S+ + +VKD+ ++ ++
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELK 429
Query: 92 -------CMINANIQWGNLEEAQRLFDGMPERNEVS-----WTALISGFMKHGRVEESMW 139
C++ A LE + + G RN S AL+ ++K G + +
Sbjct: 430 PDSRTMACVLPACASLSALERGKEIH-GYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ P ++++SWT I G+ +G+ EA+ F ++ ++G++P+EV+F SI AC+
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 200 FRLGLSVFGLIFKAGF--EKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVI 256
G F I K F E + ++ L + G + A + + D W +
Sbjct: 549 LEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGAL 607
Query: 257 LDVFIEMGD--LGE--ARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYS 311
L D L E A R+F+ PE + + V++A Y ++ EE RL ++ +
Sbjct: 608 LCGCRNYHDIELAEKVAERVFELEPENS--GYYVLLANIYAEAEKWEEVKRLREKIGKQG 665
Query: 312 FKPNTSC 318
+ N C
Sbjct: 666 LRKNPGC 672
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 286/512 (55%), Gaps = 39/512 (7%)
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME----KRDVVSWTVILDV 259
L V LI E ++ + ++ + ++ R++ ++ + D+V IL++
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + G L EA+ +FD+MP ++ VSW+V+I+ Y+QSG EA LF +M F+PN
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
S +L A + + G +HA LK G + +V + ++L+D+Y++ ++ +++F+S+
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
K+ VVSWN++I G+ G+ E V +F
Sbjct: 270 KN---VVSWNALIAGHARKGEGEH-------------------------------VMRLF 295
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+ML G P T+SSV A AS SLE+GK +H +IK G ++G L D YAKS
Sbjct: 296 LQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 355
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G I+ +++VF R+ ++ +SW ++ G A+ G E++ LFE+M K + PNE+T LSVL
Sbjct: 356 GSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVL 415
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSHSGL+D+G YF M+ + I+ H+ VVD+L R+GRL+EA FI MP +P
Sbjct: 416 TACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPT 474
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ W +LL C+ +KN + A + +++L +VLLSNIYASAGR DA VRK+
Sbjct: 475 AAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKM 534
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
M E G++K CSWVE+ N+VH F D +P
Sbjct: 535 MKESGVKKEPACSWVEIENEVHVFVANDDSHP 566
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 184/392 (46%), Gaps = 65/392 (16%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+++ + K G +EE+ F++ P ++++SWT I G+ Q+G + EAL LF K+L G +PN
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPN 205
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E T SS+ KA G + K G++ +V V +SL+ + + + A+ +F+
Sbjct: 206 EFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ ++VVSW + +IA + + G E RL
Sbjct: 266 SLAAKNVVSW-------------------------------NALIAGHARKGEGEHVMRL 294
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F QM R F+P +S V +A AS +L G VHAHV+K G + +I N LID+Y+K
Sbjct: 295 FLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAK 354
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G KD + VF +V++D +VSWNS+I GY +G EA +LF+
Sbjct: 355 SGSIKDAKKVFRRLVKQD---IVSWNSIISGYAQHGLGAEALQLFE-------------- 397
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+ML + PN+ TF SVL A + L++G+ + K
Sbjct: 398 -----------------QMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIE 440
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
V + D ++G + + + + MP K
Sbjct: 441 AQVAHHVTVVDLLGRAGRLNEANKFIEEMPIK 472
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 178/447 (39%), Gaps = 84/447 (18%)
Query: 10 SINPE-TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLG 68
S+ PE T ++ + C L K + QGRA+H H+ + + L +L MY
Sbjct: 100 SLEPERTLYSKMLNKCTYLRK-------LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAK 152
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTAL 124
EA ++ + D+V +I+ Q G EA LF M + NE + ++L
Sbjct: 153 CGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSL 212
Query: 125 ISGFM-----KHGR------------------------------VEESMWYFERNPFQNV 149
+ HGR + E+ F +NV
Sbjct: 213 LKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNV 272
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+SW A I G + G ++LFL++L G +P T+SS+ ACA G V
Sbjct: 273 VSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAH 332
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ K+G + + N+LI + K G + A+ VF R+ K+D+VSW I+ + + G EA
Sbjct: 333 VIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEA 392
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
++F+ QM + +PN F VL+A +
Sbjct: 393 LQLFE-------------------------------QMLKAKVQPNEITFLSVLTACSHS 421
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G + + K IE V ++DL + G + + + K A V W
Sbjct: 422 GLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV--WG 479
Query: 390 SMIGGYGLNGQME----EAKELFDNMP 412
+++G ++ M+ A+++F+ P
Sbjct: 480 ALLGSCRMHKNMDLGVYAAEQIFELDP 506
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 134/325 (41%), Gaps = 47/325 (14%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
GR LH +K G ++ + LL MY EA I L ++V N +I +
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHA 283
Query: 99 QWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWY-------------- 140
+ G E RLF M E +++++ + G +E+ W
Sbjct: 284 RKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAY 343
Query: 141 ---------------------FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
F R Q+++SW + I G+ Q+G EAL+LF ++L++
Sbjct: 344 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 403
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V+PNE+TF S+ AC+ G F L+ K E V+ +++ L + G ++ A
Sbjct: 404 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEAN 463
Query: 240 SVFDRME-KRDVVSWTVILDV--FIEMGDLG--EARRIFDEMPERNEVSWSVMIAR-YNQ 293
+ M K W +L + DLG A +IF+ P ++ V+++ Y
Sbjct: 464 KFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDP--HDSGPHVLLSNIYAS 521
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSC 318
+G +A ++ + M K +C
Sbjct: 522 AGRLSDAAKVRKMMKESGVKKEPAC 546
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/526 (34%), Positives = 288/526 (54%), Gaps = 34/526 (6%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
FS + ++C N LG + LI +G + N L+ L K G++D A ++F M
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+++++S ++++ + GD AR++FDEMPERN +W+ M+A Q + EE LF +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M F P+ VL A L+AL +G VH +V K G E ++ + ++L +Y KCG
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCG- 233
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ E + L MP +N V+W+ +I+G
Sbjct: 234 ---------------------------------SLGEGERLIRAMPSQNVVAWNTLIAGR 260
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
++ + V +N M ++G P+K TF SV+ + + +A+L +G+ +H ++IK G V
Sbjct: 261 AQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIV 320
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ ++L Y++ G +E S +VF + + + W+ M+ G E+I+LF +ME+
Sbjct: 321 SVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQE 380
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ N++T LS+L+ACSH GL +KG+K+F+ M Y +KP HYTC+VD+L R G + E
Sbjct: 381 KLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEE 440
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE I SMP + D W +LLS CK +K ++A R + +++L P YVLLSNI+AS
Sbjct: 441 AEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHAS 500
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
RW D +VRK M ++ L+K G SW+EV+NQ+H F +PK
Sbjct: 501 DKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPK 546
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 212/500 (42%), Gaps = 98/500 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL+ S+N + G+ LH +I +G +++++ LL +Y
Sbjct: 58 LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLY-------------------- 97
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G L+ A LF MP +N +S LI+G+ + G + F+ P
Sbjct: 98 -----------SKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPE 146
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NV +W A + G +Q F+ E L LF ++ E G P+E S+ + CA + G V
Sbjct: 147 RNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQV 206
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + K GFE ++ V +SL + +K G + + M ++V
Sbjct: 207 HGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNV---------------- 250
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
V+W+ +IA Q+GYPEE + M F+P+ F V+S+
Sbjct: 251 ---------------VAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSC 295
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ L L G +HA V+K G V + ++LI +YS+CG + VF +E + VV
Sbjct: 296 SELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVF---LECENGDVV 352
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
W+SMI YG +G+ EA +LF+ M E ++ +
Sbjct: 353 CWSSMIAAYGFHGRGVEAIDLFNQM----------------EQEKLE------------- 383
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESS 505
N TF S+L A + EKG ++ K G + T + D + G +E +
Sbjct: 384 --ANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEA 441
Query: 506 RRVFDRMPDKNE-ISWTVMV 524
+ MP K + I+W ++
Sbjct: 442 EALIRSMPVKADVITWKTLL 461
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 144/255 (56%), Gaps = 3/255 (1%)
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
S FS +L + S +L G +H+ ++ G D FISN L++LYSKCG+ +F
Sbjct: 53 SLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGV 112
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ K+ ++S N +I GY +G A+++FD MP+RN +W+A+++G ++ + +
Sbjct: 113 MPRKN---IMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGL 169
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F+ M G +P++ SVL A + +L G+ +HG + K GF +++ + ++L Y
Sbjct: 170 GLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMY 229
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K G + R+ MP +N ++W ++ G A++GY +E ++ + M+ P+++T +
Sbjct: 230 MKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFV 289
Query: 557 SVLFACSHSGLVDKG 571
SV+ +CS + +G
Sbjct: 290 SVISSCSELATLGQG 304
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 150/362 (41%), Gaps = 68/362 (18%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F+LVV + + + ++ G+L E +RL MP +N V+W LI+
Sbjct: 217 FNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIA------------------ 258
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
G QNG+ E L + + +G +P+++TF S+ +C+E+ G
Sbjct: 259 -------------GRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQ 305
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + KAG VSV +SLI++ + G ++ + VF E DVV W
Sbjct: 306 QIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW----------- 354
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
S MIA Y G EA LF QM + + N F +L
Sbjct: 355 --------------------SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLY 394
Query: 325 ALASLKALRSGMH-VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A + G+ V K G++ + ++DL + G ++ + S+ K A
Sbjct: 395 ACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVK--A 452
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFD---NMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
V++W +++ ++ + E A+ + + + R+ V + + + + K++D V V
Sbjct: 453 DVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRK 512
Query: 441 EM 442
M
Sbjct: 513 AM 514
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 123/291 (42%), Gaps = 41/291 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ ++ GR +HG++ K G + + L MY+ E +++ + +
Sbjct: 190 VLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQN 249
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PER----------NEVSW--------- 121
+V N +I Q G EE ++ M P++ +E++
Sbjct: 250 VVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHA 309
Query: 122 --------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
++LIS + + G +E S+ F +V+ W++ I + +G E
Sbjct: 310 EVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVE 369
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF-KAGFEKHVSVCNSLI 226
A+ LF ++ + ++ N+VTF S+ AC+ G+ F L+ K G + + ++
Sbjct: 370 AIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMV 429
Query: 227 TLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
L + G V+ A ++ M K DV++W +L ARRI +E+
Sbjct: 430 DLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEV 480
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 306/578 (52%), Gaps = 68/578 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALIS +M G V + F + V+SW A I G V+NG++ AL++F ++ GV
Sbjct: 148 ALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGI 207
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T S+ ACA+ D G +V L+ G +V+V N+LI
Sbjct: 208 DRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALI---------------- 251
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEEAF 301
D++ + L +ARR+FD +++ VSW+ MI Y + EA
Sbjct: 252 ---------------DMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAI 296
Query: 302 RLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
L QM PN +LSA AS+ + + HA +++G++ D+ + ALID
Sbjct: 297 SLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDA 356
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y++CG+ K RL E+ +WN+ + GY ++G+ ++A EL
Sbjct: 357 YARCGKMKLMRLTL----ERGSWRAETWNAALSGYTVSGREKKAIEL------------- 399
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
F M+ P+ +T +S+L A A A L++GK++H ++ L
Sbjct: 400 ------------------FKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTL 441
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF + T L D Y+K+GD++++ +F +P+K+ ++WT ++ G G+A+ +I L+
Sbjct: 442 GFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLY 501
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ M ++ PN +TI ++L+ACSH+G++D+G+K F M ++ + PNG HY+C+VDML R
Sbjct: 502 DRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGR 561
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+GR+ EA I MPFEP ++ W +LL C +KN + E A K L++L E+ YVLL
Sbjct: 562 AGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLL 621
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
NIYA+A RW D +VR++M E+GL K G S VE R+
Sbjct: 622 GNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARS 659
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 199/458 (43%), Gaps = 68/458 (14%)
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +TF KACA + R G +V AGF V N+LI++
Sbjct: 107 DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISM-------------- 152
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
++ GD+G A +F M R VSW+ +IA ++GY E A
Sbjct: 153 -----------------YMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALE 195
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F +M + + VL A A K L +G VH V G+ V + NALID+Y
Sbjct: 196 VFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYG 255
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC +D R VFD K VVSW +MIG Y LN + EA
Sbjct: 256 KCRSLEDARRVFDHC--KHDKDVVSWTAMIGAYVLNDRAFEA------------------ 295
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
++ +ML+SG PN T +L A AS+ S + K H I+LG
Sbjct: 296 -------------ISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLG 342
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D+ + TAL D YA+ G ++ R +R + E +W + G SG K++I LF+
Sbjct: 343 LKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTVSGREKKAIELFK 401
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M S+ P+ T+ S+L A + S + +G K + + T ++D+ S++
Sbjct: 402 RMIAESVRPDSATMASILPAYAESADLKEG-KNIHCFLLTLGFLRSTEIATGLIDVYSKA 460
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
G L A +P E D AW ++++G + + + A
Sbjct: 461 GDLDAAWALFQWLP-EKDVVAWTTIIAGYGIHGHARTA 497
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 151/349 (43%), Gaps = 42/349 (12%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYSFKPNTS 317
V+ G A + +MP+ VS+S + R Y G EA ++ M + +
Sbjct: 54 VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF----DHL 109
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
F A A L+ R G VH L G D ++ NALI +Y CG+
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGD----------- 158
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ A+ +F M R VSW+A+I+G +++ +
Sbjct: 159 -----------------------VGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALE 195
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
VF EM G +++T SVL A A L G+ +H + G V + AL D Y
Sbjct: 196 VFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYG 255
Query: 498 KSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-PNELTI 555
K +E +RRVFD DK+ +SWT M+ + A E+I+L +M + PN +T+
Sbjct: 256 KCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTM 315
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ +L AC+ S K K +++ +K + T ++D +R G++
Sbjct: 316 VYLLSACA-SMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKM 363
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI + + G+++ ER ++ +W AA+ G+ +G +A++LF +++ V+
Sbjct: 351 TALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVR 409
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T +SI A AE D + G ++ + GF + + LI + K G++D A ++
Sbjct: 410 PDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWAL 469
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F + ++DVV+WT I IA Y G+ A
Sbjct: 470 FQWLPEKDVVAWTTI-------------------------------IAGYGIHGHARTAI 498
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDL 360
L+ +M KPNT + +L A + + G+ V + + G+ + + L+D+
Sbjct: 499 LLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDM 558
Query: 361 YSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPK 413
+ G ++ RL+ D E + W +++G L+ +E AK LF P+
Sbjct: 559 LGRAGRIEEAHRLIQDMPFEPSTS---VWGALLGACVLHKNVEFGEVAAKRLFQLDPE 613
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 12/237 (5%)
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWS-AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
Y G+ A L MP+ VS+S +++ Y AV++ M + T
Sbjct: 55 YCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFDHL----T 110
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
F A A + G+ +H + + GF D ++ AL Y GD+ ++ VF M
Sbjct: 111 FPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMR 170
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++ +SW ++ G ++GYA+ ++ +F EM + + T++SVL AC+ + K L
Sbjct: 171 NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQA----KDLN 226
Query: 574 YFNSMEPIYNIKPNGRHYT---CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
++ + K G + ++DM + L +A + + D +W +++
Sbjct: 227 TGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMI 283
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 39/193 (20%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
+I+ + G+L+ A LF +PE++ V+WT +I+G+ HG ++ ++R
Sbjct: 453 LIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDR--------- 503
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
++ESG KPN VT +++ AC+ G+ VF +
Sbjct: 504 ----------------------MVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRN 541
Query: 213 A-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-WTVILDVF-----IEMGD 265
G + + L+ + + G ++ A + M S W +L +E G+
Sbjct: 542 VHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGE 601
Query: 266 LGEARRIFDEMPE 278
+ A+R+F PE
Sbjct: 602 VA-AKRLFQLDPE 613
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 298/580 (51%), Gaps = 65/580 (11%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G S ++ N+ + I G V N E+++++ + + G+ P+ TF +
Sbjct: 56 GNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVL 115
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
KACA + D LG+ + L+ KAG E V SLI L K G +D
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFID--------------- 160
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
A ++FD++P++N SW+ I+ Y G EA +FR++
Sbjct: 161 ----------------NAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMG 204
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+P++ VLSA LRSG + ++ + G+ ++VF++ AL+D Y KCG + R
Sbjct: 205 LRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERAR 264
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD ++EK+ +VSW+SMI GY NG +EA
Sbjct: 265 SVFDGMLEKN---IVSWSSMIQGYASNGLPKEA--------------------------- 294
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
DL F + NE G P+ VLC+ A + +LE G I F + LGTA
Sbjct: 295 LDLFFKMLNE----GLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTA 350
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D YAK G ++ + VF M K+ + W + GLA SG+ K+++ LF +MEK+ I P+
Sbjct: 351 LIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPD 410
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
T + +L AC+H+GLV++G +YFNSME ++ + P HY C+VD+L R+G L EA I
Sbjct: 411 RNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLI 470
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
SMP E ++ W +LL GC+ +++ Q+ E +K L L H YVLLSNIYA++ +W
Sbjct: 471 KSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWE 530
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+A +R +M+E+G++K G SW+EV VH F +P
Sbjct: 531 EAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHP 570
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 175/374 (46%), Gaps = 36/374 (9%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L G+ + RI D+ E N ++ MI + +E+ ++ M + P+
Sbjct: 48 VLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPD 107
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ F VL A A + G+ +H+ V+K G E D F+ +LI+LY+KCG + VFD
Sbjct: 108 SFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFD 167
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
I +K+ A SW + I GY G+ EA ++
Sbjct: 168 DIPDKNFA---SWTATISGYVGVGKCREAIDM---------------------------- 196
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F +L G P+ + VL A L G+ + I + G +VF+ TAL D
Sbjct: 197 ---FRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDF 253
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G++E +R VFD M +KN +SW+ M++G A +G KE+++LF +M + P+ +
Sbjct: 254 YGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAM 313
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+ VL +C+ G ++ G + +++ N T ++DM ++ GR+ A + M
Sbjct: 314 VGVLCSCARLGALELG-DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR 372
Query: 616 FEPDSNAWASLLSG 629
+ D W + +SG
Sbjct: 373 -KKDRVVWNAAISG 385
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 174/406 (42%), Gaps = 67/406 (16%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI+ + K G ++ + F+ P +N SWTA I G+V G EA+ +F +LLE G++P
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ + + AC D R G + I + G ++V V +L+ K G ++ ARSVF
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVF 267
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D M ++++VS WS MI Y +G P+EA
Sbjct: 268 DGMLEKNIVS-------------------------------WSSMIQGYASNGLPKEALD 296
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF +M KP+ VL + A L AL G + + + ALID+Y+
Sbjct: 297 LFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYA 356
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG VF + +KD V WN+ I G ++G +++A LF M K
Sbjct: 357 KCGRMDRAWEVFRGMRKKD---RVVWNAAISGLAMSGHVKDALGLFGQMEK--------- 404
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLG 481
SG P+++TF +LCA +E+G+ +
Sbjct: 405 ----------------------SGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFT 442
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRG 526
++ + D ++G ++ + ++ MP + N I W ++ G
Sbjct: 443 LTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGG 488
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 159/348 (45%), Gaps = 44/348 (12%)
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
++ + LK L+ H+HA +L++G+++D ++ N ++ G T + D E +
Sbjct: 16 LIQGFSCLKHLK---HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPN 72
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+ +N+MI G LN +E+ E++ +M K
Sbjct: 73 ---IFLFNTMIRGLVLNDCFQESIEIYHSMRKE--------------------------- 102
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
G P+ TF VL A A V E G +H ++K G D F+ +L + Y K G
Sbjct: 103 ----GLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGF 158
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
I+++ +VFD +PDKN SWT + G G +E+I++F + + + P+ +++ VL A
Sbjct: 159 IDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSA 218
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C +G + G ++ + + N T +VD + G + A + M E +
Sbjct: 219 CKRTGDLRSG-EWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGM-LEKNIV 276
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLSNIYASA 667
+W+S++ G Y + + + A+ +K+ E P Y ++ + + A
Sbjct: 277 SWSSMIQG---YASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCA 321
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 164/372 (44%), Gaps = 36/372 (9%)
Query: 66 YLGSRKSLEANEIVKDL-------NGFDLV--VHNCMINANIQWGNLEEAQRLFDGMPER 116
Y+G K EA ++ + L + F LV + C +++ G + +GM R
Sbjct: 184 YVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMV-R 242
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N TAL+ + K G +E + F+ +N++SW++ I G+ NG EAL LF K+L
Sbjct: 243 NVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKML 302
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
G+KP+ + +CA + LG LI F + + +LI + K G +D
Sbjct: 303 NEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMD 362
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM------PERNEVSWSVMIAR 290
A VF M K+D V W + G + +A +F +M P+RN ++ ++
Sbjct: 363 RAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRN--TFVGLLCA 420
Query: 291 YNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGI 347
+G EE R F M ++ P + ++ L R+G AH L + +
Sbjct: 421 CTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLG-----RAGCLDEAHQLIKSMPM 475
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS-----MIGGYGLNGQME 402
E + + AL+ C +D +LV +V K + + W+S + Y + + E
Sbjct: 476 EANAIVWGALL---GGCRLHRDTQLV--EVVLKKLIALEPWHSGNYVLLSNIYAASHKWE 530
Query: 403 EAKELFDNMPKR 414
EA ++ M +R
Sbjct: 531 EAAKIRSIMSER 542
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 103/233 (44%), Gaps = 19/233 (8%)
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+ L+ K +H +++LG D +L + G+ S R+ D+ + N + M+
Sbjct: 21 SCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMI 80
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
RGL + +ESI ++ M K ++P+ T VL AC+ + G+K +S+
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVK-MHSLVVKAGC 139
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + ++++ ++ G + A + +P + + +W + +SG Y A+
Sbjct: 140 EADAFVKISLINLYTKCGFIDNAFKVFDDIP-DKNFASWTATISG---YVGVGKCREAID 195
Query: 645 NLWKLAEE--HPAGYVLLSNIYAS-------AGRWIDAMNVRKLMTEKGLRKS 688
+L E P + L+ + A +G WID + +TE G+ ++
Sbjct: 196 MFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWID-----EYITENGMVRN 243
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 207/660 (31%), Positives = 336/660 (50%), Gaps = 104/660 (15%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T L+S F ++G V+E+ FE + + + + GF + +AL+ F+++ V+
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P F+ + K C + + R+G + GL+ K+GF
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS------------------------- 167
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
D+ + T + +++ + + EAR++FD MPER+ VSW+ ++A Y+Q+G A
Sbjct: 168 ------LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+ + M + KP+ VL A+++L+ + G +H + ++ G + V IS AL+D+Y
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDV 417
+KCG + R +FD ++E++ VVSWNSMI Y N +EA +F M K DV
Sbjct: 282 AKCGSLETARQLFDGMLERN---VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 418 S-----------------------------------WSAIISGYLEHKQFDLVFAVF--- 439
S +++IS Y + K+ D ++F
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 440 --------NEMLL----SGEI----------------PNKSTFSSVLCASASVASLEKGK 471
N M+L +G P+ T+ SV+ A A ++ K
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+HG +++ +VF+ TAL D YAK G I +R +FD M +++ +W M+ G G
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ K ++ LFEEM+K +I PN +T LSV+ ACSHSGLV+ GLK F M+ Y+I+ + HY
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+VD+L R+GRL+EA DFI MP +P N + ++L C+ +KN AE+A + L++L
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 638
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ +VLL+NIY +A W VR M +GLRK+ GCS VE++N+VH FF + +P
Sbjct: 639 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHP 698
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 203/429 (47%), Gaps = 77/429 (17%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG L+K+G + + T L MY R+ EA ++ + DLV N ++ Q
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 100 WGNLEEAQRLFDGMPERN-------------------------EVSWTALISGF------ 128
G A + M E N E+ A+ SGF
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 129 --------MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
K G +E + F+ +NV+SW + I +VQN EA+ +F K+L+ GV
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP +V+ ACA++ D G + L + G +++VSV NSLI++ K EVD A S
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+F +++ R +VSW + MI + Q+G P +A
Sbjct: 394 MFGKLQSRTLVSW-------------------------------NAMILGFAQNGRPIDA 422
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F QM + KP+T + V++A+A L +H V++ ++K+VF++ AL+D+
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRND 416
Y+KCG RL+FD + E+ HV +WN+MI GYG +G + A ELF+ M K N
Sbjct: 483 YAKCGAIMIARLIFDMMSER---HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 417 VSWSAIISG 425
V++ ++IS
Sbjct: 540 VTFLSVISA 548
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 188/436 (43%), Gaps = 81/436 (18%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L +++ L+ G+ +HG+ +++G ++T L+ MY A ++ +
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------P---------------------- 114
++V N MI+A +Q N +EA +F M P
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 115 -----------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+RN +LIS + K V+ + F + + ++SW A I GF QNG
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNG 417
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+AL F ++ VKP+ T+ S+ A AE++ + G++ ++ +K+V V
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L+ + K G + +AR +FD M +R V +W ++D
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID------------------------- 512
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
Y G+ + A LF +M + + KPN F V+SA + + +G+ +++
Sbjct: 513 ------GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMM 565
Query: 344 K--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS-WNSMIGGYGLNGQ 400
K IE + A++DL + G + +D I++ V V+ + +M+G ++
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEA---WDFIMQMPVKPAVNVYGAMLGACQIHKN 622
Query: 401 M----EEAKELFDNMP 412
+ + A+ LF+ P
Sbjct: 623 VNFAEKAAERLFELNP 638
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 197/630 (31%), Positives = 325/630 (51%), Gaps = 74/630 (11%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
R + V + A I F Q G A++L +S ++ T+SS+ + CA
Sbjct: 60 RTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTD 117
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V +I + L++L G++ R VFD MEK++V W ++ + +
Sbjct: 118 GKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177
Query: 263 MGDLGE--------------------ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+GD E A +FD++ +R+ +SW+ MI+ Y +G E
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLE 237
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+++QM + + VL A+ L G VH+ +K E+ + SN L+D+YS
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYS 297
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR-------- 414
KCG+ VF+ + E++V VSW SMI GY +G+ + A L M K
Sbjct: 298 KCGDLDGALRVFEKMGERNV---VSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVA 354
Query: 415 -------------------------------NDVSWSAIISGYLEHKQFDLVFAVFNEML 443
N +A++ Y + D +VF+ M+
Sbjct: 355 TTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV 414
Query: 444 LS---------GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+ GE+ P+ T + +L A AS+++LE+GK++HG I++ G+ D + AL
Sbjct: 415 VKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D Y K G + +R +FD +P K+ +SWTVM+ G GY E+I F EM I P+E+
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEV 534
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
+ +S+L+ACSHSGL+++G ++F M+ +NI+P HY C+VD+LSR+G LS+A +FI +
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIET 594
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
+P PD+ W +LL GC+ Y + ++AE+ + +++L E+ YVLL+NIYA A +W +
Sbjct: 595 LPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEV 654
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+R+ + +KGLRK+ GCSW+E++ +V+ F
Sbjct: 655 KRMREKIGKKGLRKNPGCSWIEIKGKVNLF 684
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 211/484 (43%), Gaps = 106/484 (21%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE---------RNPF----- 146
G+L+E +R+FD M ++N W ++S + K G +ES+ F+ + P
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL 207
Query: 147 ------QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
++VISW + I G+V NG + L+++ +++ G+ + T S+ CA
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG +V L K+ FE+ ++ N+L+ + K G++D A VF++M +R+VVSWT ++ +
Sbjct: 268 SLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 261 IEMGDLGEARRIFDEMP---------------------------------------ERNE 281
G A R+ +M E N
Sbjct: 328 TRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNL 387
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYS----------FKPNTSCFSIVLSALASLKA 331
+ ++ Y + G + A +F M KP++ + +L A ASL A
Sbjct: 388 FVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSA 447
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G +H ++L+ G D ++NAL+DLY KCG RL+FD I KD +VSW M
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD---LVSWTVM 504
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GYG++G EA A FNEM +G P++
Sbjct: 505 ISGYGMHGYGNEA-------------------------------IATFNEMRDAGIEPDE 533
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESSRRVF 509
+F S+L A + LE+G I+K F + L + D +++G++ +
Sbjct: 534 VSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFI 592
Query: 510 DRMP 513
+ +P
Sbjct: 593 ETLP 596
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 188/446 (42%), Gaps = 74/446 (16%)
Query: 13 PETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKS 72
PE++ + + C +D+ S N +I G +G ER L +MYLG
Sbjct: 201 PESASELFDKLCD---RDVISWNSMISGYVSNGL-------TERGLEIYKQMMYLG---- 246
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
I DL V+ C + + G + + R S T L+ + K G
Sbjct: 247 -----IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNT-LLDMYSKCG 300
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
++ ++ FE+ +NV+SWT+ I G+ ++G S A++L ++ + GVK + V +SI
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
ACA G V I E ++ VCN+L+ + K G +D A SVF M +D++S
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIIS 420
Query: 253 WTVIL-------------------------------------------------DVFIEM 263
W ++ D++++
Sbjct: 421 WNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G LG AR +FD +P ++ VSW+VMI+ Y GY EA F +M +P+ F +L
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540
Query: 324 SALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
A + L G +++K IE + ++DL S+ G +++
Sbjct: 541 YACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAP 599
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKEL 407
A + W +++ G + +E A+++
Sbjct: 600 DATI--WGALLCGCRIYHDIELAEKV 623
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 137/308 (44%), Gaps = 33/308 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY-----LGSRKSLEANEIVKDLNGFDLVVHN-- 91
G+ +H ++ + ++ L+ MY + S+ + +VKD+ ++ ++
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELK 429
Query: 92 -------CMINANIQWGNLEEAQRLFDGMPERNEVS-----WTALISGFMKHGRVEESMW 139
C++ A LE + + G RN S AL+ ++K G + +
Sbjct: 430 PDSRTMACILPACASLSALERGKEIH-GYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ P ++++SWT I G+ +G+ EA+ F ++ ++G++P+EV+F SI AC+
Sbjct: 489 LFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 200 FRLGLSVFGLIFKAGF--EKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVI 256
G F I K F E + ++ L + G + A + + D W +
Sbjct: 549 LEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGAL 607
Query: 257 L---DVFIEMGDLGE--ARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRY 310
L ++ ++ +L E A R+F+ PE + V++A Y ++ EE R+ ++ +
Sbjct: 608 LCGCRIYHDI-ELAEKVAERVFELEPE--NTGYYVLLANIYAEAEKWEEVKRMREKIGKK 664
Query: 311 SFKPNTSC 318
+ N C
Sbjct: 665 GLRKNPGC 672
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 222/742 (29%), Positives = 340/742 (45%), Gaps = 166/742 (22%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG ++K G E Y+ L+ +Y SR
Sbjct: 290 GEQLHGLVLKQGFSLETYVCNALVTLY--SR----------------------------- 318
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN A+++F+ M +R+EVS+ +LISG
Sbjct: 319 LGNFIPAEQVFNAMLQRDEVSYNSLISGLS------------------------------ 348
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
Q G+S +AL+LF K+ +KP+ VT +S+ AC+ + +G KAG +
Sbjct: 349 -QQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDI 407
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-- 277
+ +L+ L +K ++ A F E +VV W V+L + + +L E+ +IF +M
Sbjct: 408 ILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQME 467
Query: 278 --ERNEVSW-----------------------------------SVMIARYNQSGYPEEA 300
E N+ ++ SV+I Y + G + A
Sbjct: 468 GIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHA 527
Query: 301 FRLFR-------------------------------QMTRYSFKPNTSCFSIVLSALASL 329
++FR +M + F+ +SA A +
Sbjct: 528 LKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGI 587
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+AL G +HA G D+ + NAL+ LY++CG+ +D FD I KD +SWN
Sbjct: 588 QALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKD---NISWN 644
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
S+I G+ +G EEA LF M K +G+
Sbjct: 645 SLISGFAQSGHCEEALSLFSQMSK-------------------------------AGQEI 673
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
N TF + A+A+VA+++ GK +H IIK G + + L YAK G+I+ + R F
Sbjct: 674 NSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQF 733
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
MP+KNEISW M+ G ++ G+ ++++LFE+M++ + PN +T + VL ACSH GLVD
Sbjct: 734 FEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVD 793
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+G+KYF SM ++ + P HY CVVD+L RSG LS A F+ MP +PD+ +LLS
Sbjct: 794 EGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSA 853
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C +KN I E A +L +L + A YVLLSN+YA G+W R++M ++G++K
Sbjct: 854 CIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEP 913
Query: 690 GCSWVEVRNQVHFFFQKTDHNP 711
G SW+EV N VH FF +P
Sbjct: 914 GRSWIEVNNSVHAFFAGDQKHP 935
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 261/543 (48%), Gaps = 98/543 (18%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V N +I+ + G L A+++FDG+ +R+ VSW A++SG
Sbjct: 205 LFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLS----------------- 247
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
Q+G EA+ LF ++ SGV P FSS+ AC ++ +++G +
Sbjct: 248 --------------QSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQL 293
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
GL+ K GF VCN+L+TL ++G A VF+ M +RD
Sbjct: 294 HGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRD----------------- 336
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EVS++ +I+ +Q GY ++A LF++M KP+ + +LSA
Sbjct: 337 --------------EVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSAC 382
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+S+ AL G H++ +K G+ D+ + AL+DLY KC + K F + + +VV
Sbjct: 383 SSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF---LSTETENVV 439
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
WN M+ YGL + E+ F +F +M + G
Sbjct: 440 LWNVMLVAYGLLDNLNES-------------------------------FKIFTQMQMEG 468
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN+ T+ S+L +S+ +++ G+ +H +++K GF ++V++ + L D YAK G ++ +
Sbjct: 469 IEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHAL 528
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
++F R+ +K+ +SWT M+ G A+ E++NLF+EM+ I + + S + AC+
Sbjct: 529 KIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQ 588
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+++G + ++ + + +V + +R G++ +A F F D+ +W SL
Sbjct: 589 ALNQG-QQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAY-FAFDKIFSKDNISWNSL 646
Query: 627 LSG 629
+SG
Sbjct: 647 ISG 649
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 244/556 (43%), Gaps = 77/556 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ ++ G ++ ++ F+ P + + W + FV + L LF ++L+ VKP+
Sbjct: 109 LMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPD 168
Query: 184 EVTFSSICKACAEIN-DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
E T++ + + C + F + G+E + VCN LI L K G ++ A+ VF
Sbjct: 169 ERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVF 228
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D ++KRD VSW M++ +QSG EEA
Sbjct: 229 DGLQKRDSVSWV-------------------------------AMLSGLSQSGCEEEAVL 257
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF QM P FS VLSA ++ + G +H VLK G + ++ NAL+ LYS
Sbjct: 258 LFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYS 317
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
+ G VF++++++D VS+NS+I G G ++A EL
Sbjct: 318 RLGNFIPAEQVFNAMLQRD---EVSYNSLISGLSQQGYSDKALEL--------------- 359
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
F +M L P+ T +S+L A +SV +L GK H IK G
Sbjct: 360 ----------------FKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGM 403
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+ L AL D Y K DI+++ F +N + W VM+ ES +F +
Sbjct: 404 SSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQ 463
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ I PN+ T S+L CS VD G + + + N + ++DM ++ G
Sbjct: 464 MQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLG 522
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE---HPAGYVL 659
+L A + E D +W ++++G ++E+ AE NL+K ++ H
Sbjct: 523 KLDHALKIFRRLK-EKDVVSWTAMIAG--YAQHEKFAE--ALNLFKEMQDQGIHSDNIGF 577
Query: 660 LSNIYASAGRWIDAMN 675
S I A AG I A+N
Sbjct: 578 ASAISACAG--IQALN 591
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/550 (24%), Positives = 225/550 (40%), Gaps = 105/550 (19%)
Query: 172 FLKLLES-GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL 230
FL L+E GV+ N T+ + C F G + G I K GF V +C L
Sbjct: 55 FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERL----- 109
Query: 231 KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+D++I GDL A +FDEMP R W+ ++ R
Sbjct: 110 --------------------------MDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHR 143
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA-LRSGMHVHAHVLKIGIEK 349
+ LFR+M + KP+ ++ VL +HA + G E
Sbjct: 144 FVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYEN 203
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
+F+ N LIDLY K G + VFD + ++D VSW +M+ G +G EEA L
Sbjct: 204 SLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRD---SVSWVAMLSGLSQSGCEEEAVLL-- 258
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
F +M SG P FSSVL A V +
Sbjct: 259 -----------------------------FCQMHTSGVYPTPYIFSSVLSACTKVEFYKV 289
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
G+ LHG ++K GF + ++ AL Y++ G+ + +VF+ M ++E+S+ ++ GL++
Sbjct: 290 GEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQ 349
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
GY+ +++ LF++M + P+ +T+ S+L ACS G + G K F+S + +
Sbjct: 350 QGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVG-KQFHSYAIKAGMSSDII 408
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMP---------------------------------- 615
++D+ + + A +F S
Sbjct: 409 LEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEG 468
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV--LLSNIYASAGRWIDA 673
EP+ + S+L C + + + E+ + K + YV +L ++YA G+ A
Sbjct: 469 IEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNV-YVSSVLIDMYAKLGKLDHA 527
Query: 674 MNVRKLMTEK 683
+ + + + EK
Sbjct: 528 LKIFRRLKEK 537
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 201/477 (42%), Gaps = 69/477 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ +S V G +H ++KTG Y+++ L+ MY K A +I + L D
Sbjct: 479 ILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKD 538
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER-------------------------NEVSW 121
+V MI Q EA LF M ++ ++
Sbjct: 539 VVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHA 598
Query: 122 TALISGF--------------MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
A +SG+ + G+V ++ + F++ ++ ISW + I GF Q+G E
Sbjct: 599 QACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEE 658
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL LF ++ ++G + N TF A A + + +LG + +I K G + V N LIT
Sbjct: 659 ALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLIT 718
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVS 283
L K G +D A F M +++ +SW +L + + G +A +F++M + N V+
Sbjct: 719 LYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVT 778
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH- 341
+ +++ + G +E + F+ M + P ++ V+ L RSG+ A
Sbjct: 779 FVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLG-----RSGLLSRARR 833
Query: 342 -VLKIGIEKDVFISNALIDLYSKCGETKD---GRLVFDSIVE---KDVAHVVSWNSMIGG 394
V ++ I+ D + L+ S C K+ G ++E KD A V ++M
Sbjct: 834 FVEEMPIQPDAMVCRTLL---SACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAV 890
Query: 395 YGLNGQMEEAKELFDN--MPKRNDVSW-------SAIISGYLEHKQFDLVFAVFNEM 442
G G + +++ + + K SW A +G +H D ++ ++
Sbjct: 891 TGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDL 947
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 344/618 (55%), Gaps = 8/618 (1%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +I + G L +AQ+LFD MPERN SW A+I+ ++K + ++ F+ ++++
Sbjct: 450 NQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSHNLRQARALFDSAVCKDLV 509
Query: 151 SWTAAICGFVQ-NGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEINDFRLGLSVF 207
++ + + G+ + +G+ +AL F+++ + ++ +E T ++ A++ G +
Sbjct: 510 TYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLH 569
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLA-RSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K + V +SLI + K G A R + E D VS ++ G++
Sbjct: 570 SFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCREGEI 629
Query: 267 GEARRIF-DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
A +F E+ + + V+W+ MI+ + Q+GY EE+ +LF +M N F+ VLSA
Sbjct: 630 DVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSA 689
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++L++L+ G VHA+VLK + + FI + L+D+Y KC + + V E + +V
Sbjct: 690 CSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAKSVNS---ELRMQNV 746
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
S SMI GY G M EA++LFD++ ++N W+A+ GY++ +Q + VF + +E
Sbjct: 747 YSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVFELLSEYRKE 806
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
++P+ S++ A A A+L GK +H +++ G D L ++L D Y+K G I +
Sbjct: 807 AKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYA 866
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R+F + DK+ I + +M+ G A G+ E++ LF+EM K P+ +T +++L AC H
Sbjct: 867 ERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRHG 926
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV+ G +F+SM YNI P HY C++D+ R+ +L +A +F+ +P + D+ W +
Sbjct: 927 GLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLDAVIWGA 986
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
L+ C+ N ++A +A L + E+ + YV L+N+YA+ G W + +RK M K +
Sbjct: 987 FLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMGRIRKKMKGKEV 1046
Query: 686 RKSGGCSWVEVRNQVHFF 703
+K+ GCSWV V ++ H F
Sbjct: 1047 KKNAGCSWVFVESKFHVF 1064
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 235/488 (48%), Gaps = 39/488 (7%)
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
E+ + GL K+GF + + N LIT K G ++ A+ +FD M +R+V SW
Sbjct: 423 EMKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNA 482
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS-GYPEEAFRLFRQMTRYSFKP 314
I+ +++ +L +AR +FD ++ V+++ M++ Y +S GY +A F +M
Sbjct: 483 IIAAYVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMI 542
Query: 315 NTSCFSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
F+++ L+ A L + G +H+ +LK + VF +++LID+YSKCG K+
Sbjct: 543 RIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACR 602
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQ 431
V+ E V VS N+M+ G+++ A +LF ++ND V+W+ +ISG++++
Sbjct: 603 VYYGCGE--VVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGY 660
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+ +F M N+ TF+SVL A +++ SL+ GK++H ++K + F+ +
Sbjct: 661 EEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSG 720
Query: 492 LTDTYAK-------------------------------SGDIESSRRVFDRMPDKNEISW 520
L D Y K G++ +R++FD + +KN W
Sbjct: 721 LVDVYCKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVW 780
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T + G + + L E K + P+ L ++S++ AC+ + G K +S
Sbjct: 781 TALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPG-KQIHSYML 839
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
IK + + + +VDM S+ G + AE + + DS + +++G + E A
Sbjct: 840 RAGIKLDTKLTSSLVDMYSKCGSIIYAERIFREVT-DKDSIIYNIMIAGYAHHGWENEAV 898
Query: 641 RAVKNLWK 648
+ K + K
Sbjct: 899 QLFKEMVK 906
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 228/500 (45%), Gaps = 47/500 (9%)
Query: 22 ETCLCLLKDITSQNLVIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
E L + ++T++ VI G+ LH ++KT + + L+ MY EA +
Sbjct: 546 EFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYY 605
Query: 81 DLNG-FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE-VSWTALISGFMKHGRVEESM 138
D V N M+ A + G ++ A LF E+N+ V+W +ISGF+++G EES
Sbjct: 606 GCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEES- 664
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
LKLF+++ + V NE TF+S+ AC+ +
Sbjct: 665 ------------------------------LKLFVRMADEKVGWNEHTFASVLSACSNLR 694
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+LG V + K + +C+ L+ + K + A+SV + ++V S T ++
Sbjct: 695 SLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAKSVNSELRMQNVYSITSMIV 754
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ G++ EAR++FD + E+N W+ + Y + E F L + + + P+
Sbjct: 755 GYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLI 814
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++ A A AL G +H+++L+ GI+ D ++++L+D+YSKCG +F +
Sbjct: 815 LISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAERIFREVT 874
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDL 434
+KD + +N MI GY +G EA +LF M K + +++ A++S +L
Sbjct: 875 DKD---SIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRHGGLVEL 931
Query: 435 VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTAL 492
F+ M I P ++ ++ L+K + KI I+L D + A
Sbjct: 932 GEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQL----DAVIWGAF 987
Query: 493 TDTYAKSGDIESSRRVFDRM 512
+ +G+ E +R+ D +
Sbjct: 988 LNACRINGNAELARKAEDEL 1007
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 163/401 (40%), Gaps = 76/401 (18%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F S + C ++ S L G+ +H +++K + ++ + L+ +Y
Sbjct: 680 EHTFASVLSAC----SNLRSLKL---GKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMR 732
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
A + +L ++ MI GN+ EA++LFD + E+N WTAL G++K +
Sbjct: 733 YAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQ 792
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
E FE L + K E+ V P+ + SI A
Sbjct: 793 CEA----------------------------VFELLSEYRK--EAKV-PDVLILISIIGA 821
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CA G + + +AG + + +SL+ + K G + A
Sbjct: 822 CAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYA--------------- 866
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
RIF E+ +++ + +++MIA Y G+ EA +LF++M ++ FK
Sbjct: 867 ----------------ERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFK 910
Query: 314 PNTSCFSIVLSALASLKALRSGMHVH---AHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P+ F +LSA + G H ++ I E D + +IDLY + + D
Sbjct: 911 PDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYA--CMIDLYGRANQL-DK 967
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
L F + + V+ W + + +NG E A++ D +
Sbjct: 968 ALEFMRKIPIQLDAVI-WGAFLNACRINGNAELARKAEDEL 1007
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 191/543 (35%), Positives = 293/543 (53%), Gaps = 37/543 (6%)
Query: 167 EALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
L L+ LL S +P+ +TF + KACA + G +V G + K GF V V N+
Sbjct: 103 HCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAG 162
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+ W+V G + ARR+FDE P R+ VSW+
Sbjct: 163 VHF------------------------WSV-------SGSMVLARRLFDESPARDVVSWN 191
Query: 286 VMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+I Y +SG P EA LF ++ + +P+ +S A + L G +H V
Sbjct: 192 TLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVD 251
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
G+ V + NA++D+Y KCG + + VF+ I K V VSW +MI G+ G ME+
Sbjct: 252 SKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTV---VSWTTMIVGHARLGMMED 308
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A+ LFD MP+R+ W+A+++GY+++KQ A+F+EM S PN+ T ++L A +
Sbjct: 309 ARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQ 368
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
+ +LE G +H I + V LGT+L D YAK G+I+ + +F +PDKN ++WT M
Sbjct: 369 LGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAM 428
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ GLA G+A E+I F+ M + P+E+T + VL AC H+GLV +G ++F+ M Y+
Sbjct: 429 ICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYH 488
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
++ +HY+C++D+L R+G L EAE +N+MP +PD+ W +L C+ + N + E+A
Sbjct: 489 LERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAA 548
Query: 644 KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L +L YVLL+N+YA A A VR +M G+ K GCS +E+ VH F
Sbjct: 549 MKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEF 608
Query: 704 FQK 706
K
Sbjct: 609 IVK 611
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 195/387 (50%), Gaps = 38/387 (9%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEIN 198
F+ +P ++V+SW I G+V++G EAL+LF +L+E G V+P+EVT CA++
Sbjct: 179 FDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMG 238
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
D LG + + G V + N+++ + +K G ++LA+SVF+R++ + VVSWT ++
Sbjct: 239 DLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIV 298
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+G + +AR +FDEMPER+ W+ ++A Y Q+ +EA LF +M PN
Sbjct: 299 GHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEIT 358
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+LSA + L AL GM VH ++ + + V + +L+D+Y+KCG K +F I
Sbjct: 359 MVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIP 418
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+K+ ++W +MI G +G +EA E F M DL
Sbjct: 419 DKN---ALTWTAMICGLANHGHADEAIEYFQRM--------------------IDL---- 451
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYA 497
G P++ TF VL A +++G+ + K + + + D
Sbjct: 452 -------GLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLG 504
Query: 498 KSGDIESSRRVFDRMP-DKNEISWTVM 523
++G ++ + ++ + MP D + + W +
Sbjct: 505 RAGHLDEAEQLVNTMPMDPDAVVWGAL 531
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 148/350 (42%), Gaps = 75/350 (21%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ ++ G+LE A+ +F+ + + VSWT +I G + G +E++ F+ P ++V
Sbjct: 263 NAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVF 322
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
W A + G+VQN EA+ LF ++ ES V PNE+T ++ AC+++ +G+ V I
Sbjct: 323 PWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYI 382
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ V++ SL+ + K G + A +F + ++ ++WT
Sbjct: 383 DRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWT---------------- 426
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
MI G+ +EA F++M +P+ F VLSA
Sbjct: 427 ---------------AMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACC--- 468
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDVAHV 385
HA G K+GR F + +E+ + H
Sbjct: 469 --------HA------------------------GLVKEGRQFFSLMHEKYHLERKMKH- 495
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDL 434
++ MI G G ++EA++L + MP D V W A+ H L
Sbjct: 496 --YSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITL 543
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 25/150 (16%)
Query: 21 IETCLCLLKDITSQNLV-----IQGRALHGHLIKTGIHKERYLTTRLL---IMYLGSRKS 72
I+ +C+ K+I +N + I G A HGH + + +R + L I ++G +
Sbjct: 407 IKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 73 LEANEIVKDLNGFDLVVH------------NCMINANIQWGNLEEAQRLFDGMP-ERNEV 119
+VK+ F ++H +CMI+ + G+L+EA++L + MP + + V
Sbjct: 467 CCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAV 526
Query: 120 SWTALISGFMKHGRV----EESMWYFERNP 145
W AL HG + + +M E +P
Sbjct: 527 VWGALFFACRMHGNITLGEKAAMKLVELDP 556
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 231/820 (28%), Positives = 392/820 (47%), Gaps = 155/820 (18%)
Query: 34 QNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD--LNGFDLVVHN 91
QNL + GRA+H +IK+G+ + L+ +Y A I V
Sbjct: 61 QNLHL-GRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWT 119
Query: 92 CMINANIQWGNLEEAQRLFDGMPER---NEVSWTALISGFMKHGRVEESMWYFERN--PF 146
+I+ +Q G EA +FD M ++V+ +++ ++ G+++++ F++ P
Sbjct: 120 ALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPI 179
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NV++W I G + EAL F ++ + GVK + T +S+ A A + GL V
Sbjct: 180 RNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLV 239
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
K GFE + V +SLI + K D AR VFD + +++++ W +L V+ + G L
Sbjct: 240 HAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFL 299
Query: 267 GEARRIFDEM----PERNEVSWS-----------------------------------VM 287
+F +M +E +++ +
Sbjct: 300 SNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNAL 359
Query: 288 IARYNQSGYPEEAFRLFRQMTRY-------------------------------SFKPNT 316
I Y ++G +EA + F MT P+
Sbjct: 360 IDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDE 419
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ +LSA ++K L +G H +K+G+E ++F ++LID+YSKCG+ KD + S
Sbjct: 420 VSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSS 479
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIIS-------- 424
+ E+ VVS N++I GY L +E+ L M K ++++++++I
Sbjct: 480 MPERS---VVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKV 535
Query: 425 -------------GYLEHKQF------------------DLVFAVFNEM--------LLS 445
G L +F +++F+ F+ + L+S
Sbjct: 536 ILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALIS 595
Query: 446 GEI---------------------PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
G I P+++TF +VL A A ++SL G+++H I GF
Sbjct: 596 GHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDL 655
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAESGYAKESINLFEEM 543
D +AL D YAK GD++SS +VF+ + K + ISW M+ G A++GYAK ++ +F+EM
Sbjct: 656 DELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEM 715
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
++ ITP+++T L VL ACSH+G V +G + F+ M Y I+P HY C+VD+L R G
Sbjct: 716 TQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGF 775
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L EAE+FI+ + EP++ WA+LL C+ + +E+ +RA K L +L + + YVLLSN+
Sbjct: 776 LKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNM 835
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA++G W +A ++R+ M +K ++K GCSW+ V + + F
Sbjct: 836 YAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLF 875
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 242/486 (49%), Gaps = 75/486 (15%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L+ + + SG P++ TF+ ACA++ + LG +V + K+G E +LI L
Sbjct: 32 LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHL 91
Query: 229 SLKMGEVDLARSVF---------------------------------DRMEKR---DVVS 252
K + AR++F D+M D V+
Sbjct: 92 YAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVA 151
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPE--RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+L+ +I +G L +A ++F +MP RN V+W+VMI+ + ++ + EEA F QM+++
Sbjct: 152 LVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKH 211
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
K + S + VLSA+ASL AL G+ VHAH +K G E ++++++LI++Y KC
Sbjct: 212 GVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKC------ 265
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM-EEAKELFDNMPKRNDVSWSAIISGYLEH 429
QM ++A+++FD + ++N + W+A++ Y ++
Sbjct: 266 -----------------------------QMPDDARQVFDAISQKNMIVWNAMLGVYSQN 296
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
V +F +M+ G P++ T++S+L A LE G+ LH IIK F ++F+
Sbjct: 297 GFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVN 356
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
AL D YAK+G ++ + + F+ M ++ ISW ++ G + + +LF M I
Sbjct: 357 NALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIV 416
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+E+++ S+L AC + +++ G + F+ + ++ N + ++DM S+ G + +A
Sbjct: 417 PDEVSLASILSACGNIKVLEAG-QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHK 475
Query: 610 FINSMP 615
+SMP
Sbjct: 476 TYSSMP 481
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 158/331 (47%), Gaps = 22/331 (6%)
Query: 122 TALISGFMKHGRVEESMWYF-ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
T+L+ +M R+ ++ F E + ++++ WTA I G +QN S AL L+ ++ ++ +
Sbjct: 559 TSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNI 618
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
P++ TF ++ +ACA ++ G + LIF GF+ ++L+ + K G+V +
Sbjct: 619 SPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQ 678
Query: 241 VFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSG 295
VF+ + K+DV+SW ++ F + G A ++FDEM + ++V++ ++ + +G
Sbjct: 679 VFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAG 738
Query: 296 YPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
+ E ++F M Y +P ++ ++ L L+ + K+ +E + I
Sbjct: 739 WVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEA---EEFIDKLEVEPNAMIW 795
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
L+ G+ K G+ ++E + + + Y +G +EA+ L M K+
Sbjct: 796 ANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKK 855
Query: 415 N-----DVSWSAI-------ISGYLEHKQFD 433
+ SW + ++G + H +D
Sbjct: 856 DIQKIPGCSWIVVGQETNLFVAGDISHSSYD 886
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 19/246 (7%)
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+H + V + + SG P++ TF+ L A A + +L G+ +H +IK G F
Sbjct: 24 KHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSF 83
Query: 488 LGTALTDTYAKSGDIESSRRVFDR--MPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
AL YAK + +R +F P + +SWT ++ G ++G E++++F++M
Sbjct: 84 CQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRN 143
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSME-PIYNIKPNGRHYTCVVDMLSRSGRL 604
+++ P+++ +++VL A G +D + F M PI N+ + ++ +++
Sbjct: 144 SAV-PDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVA----WNVMISGHAKTAHY 198
Query: 605 SEAEDFINSMP---FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
EA F + M + + AS+LS IA A N L H S
Sbjct: 199 EEALAFFHQMSKHGVKSSRSTLASVLSA--------IASLAALNHGLLVHAHAIKQGFES 250
Query: 662 NIYASA 667
+IY ++
Sbjct: 251 SIYVAS 256
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 221/732 (30%), Positives = 357/732 (48%), Gaps = 107/732 (14%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDG-MPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
++ C+ + G A+ L +G +NE T L+ + K E ++ F R
Sbjct: 85 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 144
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NV SW A + + GFS +AL F+++ E+GV P+ ++ KAC + LG V
Sbjct: 145 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 204
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + K GF V V +SL+ + K G ++ AR VFD M +++VV+W ++ +++ G
Sbjct: 205 HGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLN 264
Query: 267 GEARRIFDEM------PERNEVS---------------------------------WSVM 287
EA +F +M P R V+ S +
Sbjct: 265 QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 324
Query: 288 IARYNQSGYPEEAFRLFRQM------------TRY-------------------SFKPNT 316
I Y++ G E+A +F +M + Y + + ++
Sbjct: 325 INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDS 384
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
S +LSA A ++ G H + ++ +E DV ++N++ID+Y+KC D R VFDS
Sbjct: 385 VTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDS 444
Query: 377 IVEKDVA--------------------------------HVVSWNSMIGGYGLNGQMEEA 404
E+D+ +V+SWNS+I G+ NGQ+ EA
Sbjct: 445 TTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEA 504
Query: 405 KELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
K++F M + N ++W+ +ISG + F +M +G P+ ++ +SVL A
Sbjct: 505 KDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLA 564
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ SL G+ +HG I + F V + T+L D YAK G I+ +++VF M K +
Sbjct: 565 CTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIY 624
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ A G A E++ LF+ ++K I P+ +T S+L ACSH+GLV++GL F M
Sbjct: 625 NAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVS 684
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+N+ P HY CVV +LSR G L EA I +MPF+PD++ SLL+ C+ + ++ E
Sbjct: 685 KHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGE 744
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
K+L+KL + YV LSN YA+AGRW++ N+R LM +GLRK+ GCSW++ ++
Sbjct: 745 YLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKL 804
Query: 701 HFFFQKTDHNPK 712
+ F +PK
Sbjct: 805 NVFVAGDGSHPK 816
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 212/453 (46%), Gaps = 35/453 (7%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ H + I+ + + + ++ MY + +A ++ DLV+ N ++ A Q
Sbjct: 403 GKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQ 462
Query: 100 WGNLEEAQRL-----FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP---FQ-NVI 150
G EA +L FD +P N +SW ++I GF+++G+V E+ F + FQ N+I
Sbjct: 463 VGLSGEALKLFYQMQFDSVPP-NVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLI 521
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+WT I G Q+GF +EA+ F K+ E+G++P+ + +S+ AC +I G ++ G I
Sbjct: 522 TWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFI 581
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ F V V SL+ + K G +D A+ VF M +++ + ++ + G EA
Sbjct: 582 TRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEAL 641
Query: 271 RIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSA 325
+F + E + ++++ +++ + +G E LF M ++++ P + V+S
Sbjct: 642 ALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSL 701
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L+ L + + +L + + D I +L+ + E + G + + + + ++
Sbjct: 702 LSRCGNLDEALRL---ILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNS 758
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSW-------SAIISGYLEHKQFD 433
++ ++ Y G+ E + D M R SW + ++G H + +
Sbjct: 759 GNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTE 818
Query: 434 LVFA----VFNEMLLSGEIPNKSTFSSVLCASA 462
++A + +EM G +P S + LC+ A
Sbjct: 819 EIYAMLAMLLSEMRFMGYVPIASNEEN-LCSRA 850
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 38/343 (11%)
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG- 346
I+ + G+ +E+ L +M F+ + +L +AL +G +HA +LK G
Sbjct: 51 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110
Query: 347 -IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
K+ ++ L+ Y+KC D V A
Sbjct: 111 FFAKNEYVETKLVVFYAKC----------------DFPEV------------------AV 136
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
LF + RN SW+AI+ + F EM +G P+ +VL A S+
Sbjct: 137 RLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQ 196
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+ GK +HG ++K+GF VF+ ++L D Y K G +E +R+VFD M +KN ++W M+
Sbjct: 197 LIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIV 256
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
G ++G +E+I++F +M I P +T+ S L A ++ + +G K +++ + ++
Sbjct: 257 GYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEG-KQGHAIAILNSLD 315
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ + +++ S+ G + +AE + M E D W L+S
Sbjct: 316 LDNILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLIS 357
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 225/737 (30%), Positives = 343/737 (46%), Gaps = 119/737 (16%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHK--ERYLTT------RLLIMYLGSRKS 72
+E C LL+ + +G+ +H HL+K +H+ E LT +L+ +Y+ +
Sbjct: 9 LEYCTVLLESCIQSKSLFRGKLIHQHLLKC-LHRTHETNLTNFDVPFEKLVDLYIACSEL 67
Query: 73 LEANEIVKDL--NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PER-------- 116
A + + ++V+ N +I A G EEA L+ M P R
Sbjct: 68 KIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLK 127
Query: 117 -------------------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
N TAL+ + K G ++++ F++ ++V++
Sbjct: 128 ACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVA 187
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W + I GF + S++ + L +++ V PN T + A A++N R G + G
Sbjct: 188 WNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCV 247
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ GF DVV T ILDV+ + + ARR
Sbjct: 248 RRGFVG-------------------------------DVVVGTGILDVYGKCQCIDYARR 276
Query: 272 IFDEMP-ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS---FKPNTSCFSIVLSALA 327
IFD M +NEV+WS M+ Y + EA LF Q+ + + V+ A
Sbjct: 277 IFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCA 336
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+L L +G +H + +K G D+ + N L+ +Y+KCG
Sbjct: 337 NLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGI--------------------- 375
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+NG M F+ M R+ VS++AIISGY+++ + +F EM LSG
Sbjct: 376 ---------INGAMR----FFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI 422
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P K+T +SVL A A +A L G H I GF D + AL D YAK G I+++R+
Sbjct: 423 NPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARK 482
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VFDRM + +SW M+ G E++ LF+ M+ + P+++T + ++ ACSHSGL
Sbjct: 483 VFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGL 542
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
V +G +FN+M + I P HY C+VD+LSR+G E FI MP EPD W +LL
Sbjct: 543 VAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALL 602
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
S C+ YKN ++ E K + KL E +VLLSN+Y++ GRW DA VR E+G K
Sbjct: 603 SACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEK 662
Query: 688 SGGCSWVEVRNQVHFFF 704
S GCSW+E+ VH F
Sbjct: 663 SPGCSWIEISGVVHTFL 679
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 205/637 (32%), Positives = 330/637 (51%), Gaps = 73/637 (11%)
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
R + A+ + +++ N I A+++ G + +A+RLF M R+ ++ A++ G+
Sbjct: 18 RPAAPADACITGKPDAEVIRRNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYA 77
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+GR+ ++ +F P + FS+ L L GV SS
Sbjct: 78 ANGRLTLALSFFRSIP--------------RPDSFSYNTL-----LHALGVS------SS 112
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ A A ++ + SV N +I+ G V LAR FD ++D
Sbjct: 113 LADARALFDEMPVKDSV--------------SYNVMISSHANHGLVSLARHYFDLAPEKD 158
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
VSW +L +I G + EAR +FD E + +SW+ ++A Y Q EEA ++F +M
Sbjct: 159 AVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQCSQIEEAQKMFNRM-- 216
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
P S + + S A R M + + +DVF A++ Y++ G ++
Sbjct: 217 ----PQRDVVS--WNTMVSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSGYAQNGMLEE 270
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+ VFD++ EK+ VSWN+M+ Y MEEAKELFD MP RN SW+ +++GY +
Sbjct: 271 AKRVFDAMPEKNA---VSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQA 327
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD---V 486
D A+F+ M P K S +A +A+ +G GF + +
Sbjct: 328 GMLDEARAIFDMM------PQKDAVSW----AAMLAAYSQG----------GFSEETLQL 367
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F Y K G++E + F+ M +++ +SW M+ G A G+ KE++ +F+ M KT
Sbjct: 368 FKEMGRCAMYFKCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEALEVFDTMRKT 427
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
S P+++T++ VL ACSHSGLV+KG+ YF SM + + HYTC++D+L R+GRL E
Sbjct: 428 STKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDE 487
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A + + MPFEPDS W +LL + ++N ++ A + +++L E+ YVLLSNIYAS
Sbjct: 488 AVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYAS 547
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+G+W D +R +M E+G++K G SW+EV+N+VH F
Sbjct: 548 SGKWRDVDKMRLMMHERGVKKVPGFSWIEVQNKVHTF 584
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 203/436 (46%), Gaps = 70/436 (16%)
Query: 28 LKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
+KD S N++I A HG H K+ +L Y+ + + EA ++
Sbjct: 125 VKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDS 184
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+D + N ++ +Q +EEAQ++F+ MP+R+ VSW ++SG + G + E+ F
Sbjct: 185 RTEWDAISWNALMAGYVQCSQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLF 244
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ P ++V +WTA + G+ QNG EA ++F + E N V+++++ A + R
Sbjct: 245 DVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAMPEK----NAVSWNAMMAAYVQ----R 296
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI----- 256
+ +F A ++V+ N+++T + G +D AR++FD M ++D VSW +
Sbjct: 297 RMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDAVSWAAMLAAYS 356
Query: 257 --------LDVFIEM---------GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
L +F EM G++ EA F+EM ER+ VSW+ MIA Y + G+ +E
Sbjct: 357 QGGFSEETLQLFKEMGRCAMYFKCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKE 416
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A +F M + S KP+ VL+A + H+ +++ GI +
Sbjct: 417 ALEVFDTMRKTSTKPDDITLVGVLAACS-----------HSGLVEKGI-------SYFYS 458
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS- 418
++ G T A + MI G G+++EA L +MP D +
Sbjct: 459 MHRDFGVT---------------AKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTM 503
Query: 419 WSAIISGYLEHKQFDL 434
W A++ H+ +L
Sbjct: 504 WGALLGASRIHRNSEL 519
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 132/551 (23%), Positives = 243/551 (44%), Gaps = 129/551 (23%)
Query: 29 KDITSQNLVIQGRALHGHLIKT-----GIHKERYLTTRLLIMYLGSRKSL-EANEIVKDL 82
+ ++ N ++ G A +G L I + + L+ LG SL +A + ++
Sbjct: 64 RSTSTYNAMLGGYAANGRLTLALSFFRSIPRPDSFSYNTLLHALGVSSSLADARALFDEM 123
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
D V +N MI+++ G + A+ FD PE++ VSW +++ ++++GR++E+ F+
Sbjct: 124 PVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFD 183
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ ISW A + G+VQ EA K+F ++ + V V+++++ A D
Sbjct: 184 SRTEWDAISWNALMAGYVQCSQIEEAQKMFNRMPQRDV----VSWNTMVSGHARRGDMAE 239
Query: 203 GLSVFGL---------------------------IFKAGFEKHVSVCNSLITLSLKMGEV 235
+F + +F A EK+ N+++ ++ +
Sbjct: 240 ARRLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMM 299
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
+ A+ +FD M R+V SW +L + + G L EAR IFD MP+++ VSW+ M+A Y+Q G
Sbjct: 300 EEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDAVSWAAMLAAYSQGG 359
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
+ EE +LF++M R +
Sbjct: 360 FSEETLQLFKEMGRCA-------------------------------------------- 375
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM---- 411
+Y KCG ++ F+ + E+D +VSWN+MI GY +G +EA E+FD M
Sbjct: 376 ----MYFKCGNMEEAHSAFEEMEERD---IVSWNTMIAGYARHGFGKEALEVFDTMRKTS 428
Query: 412 PKRNDVSWSAII-----SGYLE---------HKQFDLV-----FAVFNEML-LSGEI--- 448
K +D++ ++ SG +E H+ F + + ++L +G +
Sbjct: 429 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDEA 488
Query: 449 ----------PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
P+ + + ++L AS + E G++ KI +L P + + L++ YA
Sbjct: 489 VNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELE-PENAGMYVLLSNIYAS 547
Query: 499 SG---DIESSR 506
SG D++ R
Sbjct: 548 SGKWRDVDKMR 558
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 287/538 (53%), Gaps = 34/538 (6%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+ L ++ ++ G+ + +F + KA + + GL + GL K GF+
Sbjct: 105 KTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDS--------- 155
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
D T ++ ++ G + EAR +FD+M R+ V+WS+
Sbjct: 156 ----------------------DPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSI 193
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MI Y QSG +A LF +M Y+ +P+ S VLSA L G +H +++
Sbjct: 194 MIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENN 253
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
I D + +AL+ +Y+ CG +F+ + K++ V+ +M+ GY GQ+E A+
Sbjct: 254 IVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNL---VASTAMVTGYSKLGQIENARS 310
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
+F+ M K++ V WSA+ISGY E +FNEM G P++ T SV+ A A + +
Sbjct: 311 VFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGA 370
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L++ K +H + K GF + + AL + YAK G +E +RR+FD+MP KN ISWT M+
Sbjct: 371 LDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISA 430
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
A G A ++ F +ME +I PN +T + VL+ACSH+GLV++G K F SM +NI P
Sbjct: 431 FAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITP 490
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
HY C+VD+ R+ L EA + + +MP P+ W SL++ C+ + ++ E A K L
Sbjct: 491 KHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRL 550
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+L +H +V LSNIYA A RW D VRKLM KG+ K GCS E+ N++H F
Sbjct: 551 LELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFL 608
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 193/402 (48%), Gaps = 38/402 (9%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T L+ + GR+ E+ F++ ++V++W+ I G+ Q+G +AL LF ++ V+
Sbjct: 161 TGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVE 220
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+E+ S++ AC + G + I + + ++L+T+ G +DLA ++
Sbjct: 221 PDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNL 280
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F++M +++V+ T ++ + ++G + AR +F++M +++ V WS MI+ Y +S P+EA
Sbjct: 281 FEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEAL 340
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF +M KP+ V++A A L AL +H V K G + I+NALI++Y
Sbjct: 341 NLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMY 400
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG + R +FD + K+ V+SW MI + ++G A F M N
Sbjct: 401 AKCGSLERARRIFDKMPRKN---VISWTCMISAFAMHGDAGSALRFFHQMEDEN------ 451
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+E PN TF VL A + +E+G+ + +I
Sbjct: 452 -----IE--------------------PNGITFVGVLYACSHAGLVEEGRKIFYSMINEH 486
Query: 482 --FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISW 520
P V G + D + ++ + + + + MP N I W
Sbjct: 487 NITPKHVHYG-CMVDLFGRANLLREALELVEAMPLAPNVIIW 527
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 206/421 (48%), Gaps = 44/421 (10%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A +F+ +P+ + + ++S PE+ ++ +M + F +L A
Sbjct: 72 LDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKA 131
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L+ +K+L G+ +H K+G + D F+ L+ +Y+ CG + RL+FD + +D V
Sbjct: 132 LSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRD---V 188
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRN----DVSWSAIIS-----GYLEHKQFDLVF 436
V+W+ MI GY +G +A LF+ M N ++ S ++S G L + + F
Sbjct: 189 VTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDF 248
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+ N +++ + S+++ AS S++ +L K+ P ++ TA+ Y
Sbjct: 249 IMENNIVVDPHLQ-----SALVTMYASCGSMDLALNLFEKMT----PKNLVASTAMVTGY 299
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
+K G IE++R VF++M K+ + W+ M+ G AES +E++NLF EM+ I P+++T+L
Sbjct: 300 SKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTML 359
Query: 557 SVLFACSHSGLVDKG--------LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
SV+ AC+H G +D+ F PI N +++M ++ G L A
Sbjct: 360 SVITACAHLGALDQAKWIHLFVDKNGFGGALPINN---------ALIEMYAKCGSLERAR 410
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH--PAGYVLLSNIYAS 666
+ MP + +W ++S + + A A++ ++ +E+ P G + +YA
Sbjct: 411 RIFDKMP-RKNVISWTCMISAFAMHGD---AGSALRFFHQMEDENIEPNGITFVGVLYAC 466
Query: 667 A 667
+
Sbjct: 467 S 467
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 152/304 (50%), Gaps = 8/304 (2%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D + + ++ G+++ A LF+ M +N V+ TA+++G+ K G++E + F +
Sbjct: 257 DPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMV 316
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++++ W+A I G+ ++ EAL LF ++ G+KP++VT S+ ACA +
Sbjct: 317 KKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKW 376
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + K GF + + N+LI + K G ++ AR +FD+M +++V+SWT ++ F GD
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGD 436
Query: 266 LGEARRIF----DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFS 320
G A R F DE E N +++ ++ + +G EE ++F M ++ P +
Sbjct: 437 AGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYG 496
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ LR + + V + + +V I +L+ GE + G ++E
Sbjct: 497 CMVDLFGRANLLREALEL---VEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLEL 553
Query: 381 DVAH 384
D H
Sbjct: 554 DPDH 557
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 10/191 (5%)
Query: 66 YLGSRKSLEANEIVKDLNGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
+LG+ + + D NGF L ++N +I + G+LE A+R+FD MP +N +SWT
Sbjct: 367 HLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTC 426
Query: 124 LISGFMKHGRVEESMWYFERNPFQNV----ISWTAAICGFVQNGFSFEALKLFLKLL-ES 178
+IS F HG ++ +F + +N+ I++ + G E K+F ++ E
Sbjct: 427 MISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEH 486
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
+ P V + + N R L L+ +V + SL+ GE++L
Sbjct: 487 NITPKHVHYGCMVDLFGRANLLREALE---LVEAMPLAPNVIIWGSLMAACRVHGEIELG 543
Query: 239 RSVFDRMEKRD 249
R+ + D
Sbjct: 544 EFAAKRLLELD 554
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 340/692 (49%), Gaps = 71/692 (10%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI----VKDL 82
L++ S L + L ++ +GI ++Y L SR +I VK
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
DL V N +++ + G L+ A+++FD M ERN
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN------------------------- 199
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFR 201
V+SWT+ ICG+ + F+ +A+ LF +++ + V PN VT + ACA++ D
Sbjct: 200 ------VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE 253
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V+ I +G E + + ++L+ + +K +D+A+
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK---------------------- 291
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
R+FDE N + M + Y + G EA +F M +P+
Sbjct: 292 ---------RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+S+ + L+ + G H +VL+ G E I NALID+Y KC +FD + K
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V V+WNS++ GY NG+++ A E F+ MP++N VSW+ IISG ++ F+ VF
Sbjct: 403 V---VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 442 ML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M G + T S+ A + +L+ K ++ I K G DV LGT L D +++ G
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
D ES+ +F+ + +++ +WT + +A +G A+ +I LF++M + + P+ + + L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSH GLV +G + F SM ++ + P HY C+VD+L R+G L EA I MP EP+
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W SLL+ C+ N ++A A + + LA E YVLLSN+YASAGRW D VR M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
EKGLRK G S +++R + H F + +P+
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 245/573 (42%), Gaps = 121/573 (21%)
Query: 141 FERNPFQNVISW------TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
F + F+N S+ + I G+ +G EA+ LFL+++ SG+ P++ TF AC
Sbjct: 85 FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC 144
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A+ G+ + GLI K G+ K + V NSL+ + GE+D AR VFD M +R+VVSWT
Sbjct: 145 AKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFK 313
MI Y + + ++A LF +M R
Sbjct: 205 -------------------------------SMICGYARRDFAKDAVDLFFRMVRDEEVT 233
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
PN+ V+SA A L+ L +G V+A + GIE + + +AL+D+Y KC
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC--------- 284
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
++ AK LFD N +A+ S Y+
Sbjct: 285 -------------------------NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
VFN M+ SG P++ + S + + + + ++ GK HG +++ GF + AL
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 494 DTYAKSGDIESSRRVFDR-------------------------------MPDKNEISWTV 522
D Y K +++ R+FDR MP+KN +SW
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 523 MVRGLAESGYAKESINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ GL + +E+I +F M+ + + + +T++S+ AC H G +D +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY------ 493
Query: 582 YNIKPNG-----RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
Y I+ NG R T +VDM SR G A NS+ D +AW + + N
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGN- 551
Query: 637 QIAERAVKNLWKLAEE--HPAGYVLLSNIYASA 667
AERA++ + E+ P G + + A +
Sbjct: 552 --AERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 123/233 (52%), Gaps = 3/233 (1%)
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLEHKQFDLVF 436
++ DV+ + + G + AKE+F+N ++++I GY +
Sbjct: 60 LDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F M+ SG P+K TF L A A + G +HG I+K+G+ D+F+ +L Y
Sbjct: 120 LLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY 179
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTI 555
A+ G+++S+R+VFD M ++N +SWT M+ G A +AK++++LF M + +TPN +T+
Sbjct: 180 AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+ V+ AC+ ++ G K + + I+ N + +VDM + + A+
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRN-SGIEVNDLMVSALVDMYMKCNAIDVAK 291
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 179/428 (41%), Gaps = 53/428 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +C++ + G ++ + +GI + + L+ MY+ A + +
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PERNEV----------------- 119
+L + N M + ++ G EA +F+ M P+R +
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 120 ------------SW----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
SW ALI +MK R + + F+R + V++W + + G+V+NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVC 222
A + F E+ + N V++++I + + F + VF + + G
Sbjct: 418 EVDAAWETF----ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
S+ + +G +DLA+ ++ +EK DV T ++D+F GD A IF+ +
Sbjct: 474 MSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
R+ +W+ I +G E A LF M KP+ F L+A + ++ G +
Sbjct: 534 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 339 HAHVLKI-GIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYG 396
+LK+ G+ + ++DL + G ++ +L+ D +E + V WNS++
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN---DVIWNSLLAACR 650
Query: 397 LNGQMEEA 404
+ G +E A
Sbjct: 651 VQGNVEMA 658
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 309/581 (53%), Gaps = 34/581 (5%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI + G+V+ F+ +NV+SWT+ I G+ + EA+ LF +++E GV+P
Sbjct: 162 SLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEP 221
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N VT ACA++ D LG V L+ + G + + V N+L
Sbjct: 222 NPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL----------------- 264
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
LD++++ GD+ R IFDE ++N V ++ +++ Y Q G E
Sbjct: 265 --------------LDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLV 310
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+ +M + +P+ ++A A L L G HA+V + G+E+ ISNA+ID+Y
Sbjct: 311 VLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYM 370
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ + VFDS+ K V V+WNS+I G +G++E A +F MP+ N VSW+ +
Sbjct: 371 KCGKREAACKVFDSMSNKTV---VTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTM 427
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I ++ F+ + EM G ++ T + A + +L+ K ++ I K
Sbjct: 428 IGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDI 487
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+ LGTAL D +++ GD ++ RVF+ M ++ +WT +R A G AK +I LF+E
Sbjct: 488 HIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDE 547
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M K + ++ +++L A SH G VD+G + F +ME I+ + P HY C+VD+L R+G
Sbjct: 548 MLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAG 607
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L EA D + SMP +P+ W S L+ C+ +KN + A A + + +LA E +VLLSN
Sbjct: 608 LLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSN 667
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
IYASAG+W D VR M EKG +K G S +EV + F
Sbjct: 668 IYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREF 708
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/565 (25%), Positives = 241/565 (42%), Gaps = 108/565 (19%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ-------NVISWTA 154
L E ++L M ++ + LI+ ++ G ES+ Y N F+ ++ +
Sbjct: 34 TLIELKQLHCNMLKKGVFNINKLIAACVQMG-THESLNY-ALNAFKEDEGTKCSLYTCNT 91
Query: 155 AICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
I G+ +G EA+ ++L ++ G+ P+ TF + AC++I F G+ V G++ K
Sbjct: 92 LIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKM 151
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF 273
G K + V NSLI G+VDL R ++F
Sbjct: 152 GLVKDLFVANSLIHFYAACGKVDLGR-------------------------------KVF 180
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
DEM ERN VSW+ +I Y+ +EA LF +M +PN +SA A LK L
Sbjct: 181 DEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLE 240
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G V + ++G++ + + NAL+D+Y KCG+ R +FD +K
Sbjct: 241 LGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDK------------- 287
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
N V ++ I+S Y++H V V +EML G+ P+K T
Sbjct: 288 ---------------------NLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVT 326
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD--- 510
S + A A + L GK H + + G + A+ D Y K G E++ +VFD
Sbjct: 327 MLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS 386
Query: 511 ----------------------------RMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
MP+ N +SW M+ + ++ +E+I+L E
Sbjct: 387 NKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLRE 446
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ I + +T++ + AC + G +D + +E +I + + T +VDM SR G
Sbjct: 447 MQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEK-NDIHIDMQLGTALVDMFSRCG 505
Query: 603 RLSEAEDFINSMPFEPDSNAWASLL 627
A +M + D +AW + +
Sbjct: 506 DPLNAMRVFENME-KRDVSAWTAAI 529
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 213/431 (49%), Gaps = 46/431 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY-------LGSR---KSLEANEI--VKDLNGFD 86
+G +HG ++K G+ K+ ++ L+ Y LG + + LE N + +NG+
Sbjct: 140 EGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYS 199
Query: 87 LV-----------------------VHNCMINANIQWGNLEEAQRLFDGMPE----RNEV 119
+V C I+A + +LE +++ + M E N +
Sbjct: 200 VVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTL 259
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
AL+ +MK G + F+ +N++ + + +VQ+G + E L + ++L+ G
Sbjct: 260 VVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKG 319
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+P++VT S ACA++ D +G S +F+ G E+ ++ N++I + +K G+ + A
Sbjct: 320 QRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAAC 379
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
VFD M + VV+W ++ + G+L A RIF EMPE N VSW+ MI Q+ EE
Sbjct: 380 KVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEE 439
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A L R+M K + + SA L AL ++ ++ K I D+ + AL+D
Sbjct: 440 AIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVD 499
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----N 415
++S+CG+ + VF+++ ++DV+ +W + I + G + A ELFD M K+ +
Sbjct: 500 MFSRCGDPLNAMRVFENMEKRDVS---AWTAAIRVKAVEGNAKGAIELFDEMLKQDVKAD 556
Query: 416 DVSWSAIISGY 426
D + A+++ +
Sbjct: 557 DFVFVALLTAF 567
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 207/453 (45%), Gaps = 55/453 (12%)
Query: 245 MEKRDVVSWTVILDVFIEMG---DLGEARRIF--DEMPERNEVSWSVMIARYNQSGYPEE 299
M K+ V + ++ ++MG L A F DE + + + + +I Y SG +E
Sbjct: 45 MLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKE 104
Query: 300 AFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A ++ M P+ F +LSA + + A G+ VH V+K+G+ KD+F++N+LI
Sbjct: 105 AIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLI 164
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
Y+ C G+++ +++FD M +RN VS
Sbjct: 165 HFYAAC----------------------------------GKVDLGRKVFDEMLERNVVS 190
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+++I+GY +F EM+ G PN T + A A + LE GK + +
Sbjct: 191 WTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMT 250
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+LG + + AL D Y K GD+ + R +FD DKN + + ++ + G A E +
Sbjct: 251 ELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLV 310
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-----YFNSMEPIYNIKPNGRHYTC 593
+ +EM + P+++T+LS + AC+ G + G + N +E + NI
Sbjct: 311 VLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNIS------NA 364
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
++DM + G+ A +SM W SL++G ++ ++ E A++ ++ E +
Sbjct: 365 IIDMYMKCGKREAACKVFDSMS-NKTVVTWNSLIAG--LVRDGEL-ELALRIFGEMPESN 420
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
+ + A + +A+++ + M +G++
Sbjct: 421 LVSWNTMIGAMVQASMFEEAIDLLREMQNQGIK 453
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ N +I+ ++ G E A ++FD M + V+W +LI+G ++ G +E ++ F P N
Sbjct: 361 ISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESN 420
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
++SW I VQ EA+ L ++ G+K + VT I AC + L ++
Sbjct: 421 LVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYT 480
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I K + + +L+ + + G+ A VF+ MEKRDV +WT + V G+
Sbjct: 481 YIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKG 540
Query: 269 ARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
A +FDEM ++ ++ + ++ ++ GY ++ +LF M +
Sbjct: 541 AIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEK 585
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 206/645 (31%), Positives = 327/645 (50%), Gaps = 70/645 (10%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
KSL A VK + + N +N + G L A+ F E N S+ ++ + K
Sbjct: 28 KSLHA-LYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
++ + F+ P + +S+ I G+ +F A+ LF ++ + G + + T S +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
AC + D L F + GF+ + SV N+ +T K G + A SVF M
Sbjct: 147 IAACCDRVDLIKQLHCFSV--SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM----- 199
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
DE+ R+EVSW+ MI Y Q +A L+++M
Sbjct: 200 -----------------------DEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK-- 368
FK + + VL+AL SL L G H ++K G ++ + + LID YSKCG
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGM 294
Query: 369 -DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
D VF I+ D+ V WN+MI GY +N ++ E A+ S
Sbjct: 295 YDSEKVFQEILSPDL---VVWNTMISGYSMNEELSE----------------EAVKS--- 332
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-V 486
F +M G P+ +F V A ++++S + K +HG IK P + +
Sbjct: 333 -----------FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ AL Y KSG+++ +R VFDRMP+ N +S+ M++G A+ G+ E++ L++ M +
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PN++T ++VL AC+H G VD+G +YFN+M+ + I+P HY+C++D+L R+G+L E
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE FI++MP++P S AWA+LL C+ +KN +AERA L + YV+L+N+YA
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYAD 561
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A +W + +VRK M K +RK GCSW+EV+ + H F + +P
Sbjct: 562 ARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 194/433 (44%), Gaps = 50/433 (11%)
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
K+ AE D G S+ L K+ + N + L K G + AR+ F E+ +V
Sbjct: 17 KSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVF 75
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
S+ VI+ + + + AR++FDE+P+ + VS++ +I+ Y + A LF++M +
Sbjct: 76 SYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
F+ + S +++A L +H + + G + ++NA + YSK G ++
Sbjct: 136 FEVDGFTLSGLIAACCDRVDLIKQLHCFS--VSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VF + E + VSWNSMI YG +HK+
Sbjct: 194 SVFYGMDE--LRDEVSWNSMIVAYG-------------------------------QHKE 220
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
A++ EM+ G + T +SVL A S+ L G+ HGK+IK GF + +G+
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 492 LTDTYAKSGDIES---SRRVFDRMPDKNEISWTVMVRGLA-ESGYAKESINLFEEMEKTS 547
L D Y+K G + S +VF + + + W M+ G + ++E++ F +M++
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIG 340
Query: 548 ITPNELTILSVLFACSHSGLVDK-----GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
P++ + + V ACS+ + GL S P I N ++ + +SG
Sbjct: 341 HRPDDCSFVCVTSACSNLSSPSQCKQIHGLA-IKSHIPSNRISVN----NALISLYYKSG 395
Query: 603 RLSEAEDFINSMP 615
L +A + MP
Sbjct: 396 NLQDARWVFDRMP 408
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 50/302 (16%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL---GSRKSLEANEIV 79
T +L +TS + +I GR HG LIK G H+ ++ + L+ Y G ++ ++
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 80 KDLNGFDLVVHNCMINANIQWGNL-EEAQRLFDGM------------------------P 114
+++ DLVV N MI+ L EEA + F M P
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 115 ER---------------NEVSW-TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ N +S ALIS + K G ++++ W F+R P N +S+ I G
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI---FKAGF 215
+ Q+G EAL L+ ++L+SG+ PN++TF ++ ACA G F + FK
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFD 274
E C +I L + G+++ A D M K V+W +L + ++ A R +
Sbjct: 482 EAEHYSC--MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
Query: 275 EM 276
E+
Sbjct: 540 EL 541
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 42/210 (20%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIK----------------------LGFPYDVFLGT 490
TF +L S + L GK LH +K L + F T
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 491 ---------ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ YAK I +R++FD +P + +S+ ++ G A++ ++ LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDM 597
M K + T+ ++ AC + K L F ++ Y+ V V
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCF-------SVSGGFDSYSSVNNAFVTY 182
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
S+ G L EA M D +W S++
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMI 212
>gi|18398422|ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 343/646 (53%), Gaps = 53/646 (8%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G L+EA+ LF+ MPERN V+ A+++G++K R+ E+ F P +NV+SWT +
Sbjct: 91 GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALC 149
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+G S +A++LF ++ E V V+++++ D V F A + V
Sbjct: 150 DDGRSEDAVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQV----FDAMPSRDVV 201
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
N++I ++ ++ A+ +F M +++VV+WT ++ + GD+ EA R+F EMPERN
Sbjct: 202 SWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFSIVLSALASLKA--LRSGM 336
VSW+ MI+ + + EA LF +M + + PN + A L R G
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 321
Query: 337 HVHAHVLKIGIEK--------------------------------DVFISNALIDLYSKC 364
+HA V+ G E D+ N +I+ Y K
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G+ + +F+ + K + VSW SMI GY G + A LF + ++ V+W+ +IS
Sbjct: 382 GDLERAETLFERV--KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMIS 439
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
G ++++ F ++ ++M+ G P ST+S +L ++ + ++L++GK +H I K Y
Sbjct: 440 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACY 499
Query: 485 --DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+ L +L YAK G IE + +F +M K+ +SW M+ GL+ G A +++NLF+E
Sbjct: 500 DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKE 559
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M + PN +T L VL ACSHSGL+ +GL+ F +M+ Y+I+P HY ++D+L R+G
Sbjct: 560 MLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAG 619
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGC----KTYKNEQIAERAVKNLWKLAEEHPAGYV 658
+L EAE+FI+++PF PD + +LL C + E IAERA L +L + G+V
Sbjct: 620 KLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHV 679
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L N+YA GR +RK M KG++K+ GCSWV V + + F
Sbjct: 680 ALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFL 725
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 229/484 (47%), Gaps = 82/484 (16%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+A ++ + D+V N MI I+ +EEA+ LF M E+N V+WT+++ G+ ++G
Sbjct: 187 KAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGD 246
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--SGVKPNEVTFSSIC 191
V E+ F P +N++SWTA I GF N EAL LFL++ + V PN T S+
Sbjct: 247 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLA 306
Query: 192 KACAEIN-DF-RLGLSVFGLIFKAGFEK-------------------------------- 217
AC + +F RLG + + G+E
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF 366
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ CN +I LK G+++ A ++F+R++ D VSWT ++D ++E GD+ A +F ++
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
+++ V+W+VMI+ Q+ EA L M R KP S +S++LS+ + L G
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 337 HVHAHVLKIGI--EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
H+H + K + D+ + N+L+ +Y+KCG +D +F +V+KD VSWNSMI G
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD---TVSWNSMIMG 543
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
+G ++A L F EML SG+ PN TF
Sbjct: 544 LSHHGLADKALNL-------------------------------FKEMLDSGKKPNSVTF 572
Query: 455 SSVLCASASVASLEKGKDLHGKI-----IKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
VL A + + +G +L + I+ G + + ++ D ++G ++ +
Sbjct: 573 LGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI----SMIDLLGRAGKLKEAEEFI 628
Query: 510 DRMP 513
+P
Sbjct: 629 SALP 632
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 447 EIPNKSTF-------SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+IPN ++ +++ S L + L KI + G V T+L YAK+
Sbjct: 31 KIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKT 90
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G ++ +R +F+ MP++N ++ M+ G + E+ LF EM K N ++ +L
Sbjct: 91 GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVML 145
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
A G + ++ F+ M P N+ + +V L R+G + +A+ ++MP D
Sbjct: 146 TALCDDGRSEDAVELFDEM-PERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMP-SRD 199
Query: 620 SNAWASLLSG 629
+W +++ G
Sbjct: 200 VVSWNAMIKG 209
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 181/459 (39%), Positives = 266/459 (57%), Gaps = 4/459 (0%)
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSF 312
T +LD+ + + A IF ++ N S++ +I Y + A +F QM T S
Sbjct: 43 TKMLDLCDNLSHVDYATMIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSA 102
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
P+ F V+ + A L R G VHAHV K G + NALID+Y+KCG+
Sbjct: 103 SPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQ 162
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
V++ + E+D VSWNS+I G+ GQM+ A+E+FD MP R VSW+ +I+GY +
Sbjct: 163 VYEEMTERDA---VSWNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCY 219
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+F EM + G P++ + SVL A A + +LE GK +H K GF + + AL
Sbjct: 220 ADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNAL 279
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
+ YAK G I+ + +F++M +K+ ISW+ M+ GLA G +I +FE+M+K +TPN
Sbjct: 280 VEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNG 339
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+T + VL AC+H+GL ++GL+YF+ M Y+++P HY C+VD+L RSG++ +A D I
Sbjct: 340 VTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTIL 399
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
MP +PDS W SLLS C+ + N +IA A++ L KL E YVLL+NIYA +W
Sbjct: 400 KMPMQPDSRTWNSLLSSCRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEG 459
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
NVRKL+ K ++K+ GCS +EV N V F D P
Sbjct: 460 VSNVRKLIRSKRIKKTPGCSLIEVNNLVQEFVSGDDSKP 498
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 183/385 (47%), Gaps = 40/385 (10%)
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSIC 191
V+ + F++ NV S+ A I + N A+ +F ++L + P++ TF +
Sbjct: 54 HVDYATMIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVI 113
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
K+CA + RLG V + K G + H N+LI + K G++ A V++ M +RD V
Sbjct: 114 KSCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAV 173
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW ++ + +G + AR +FDEMP R VSW+ MI Y + G +A +FR+M
Sbjct: 174 SWNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVG 233
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+P+ VL A A L AL G +H + K G K+ + NAL+++Y+KCG +
Sbjct: 234 IEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAW 293
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+F+ ++EKD V+SW++MIGG +G+ A +F++M K
Sbjct: 294 GLFNQMIEKD---VISWSTMIGGLANHGKGYAAIRVFEDMQK------------------ 332
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF---PYDVFL 488
+G PN TF VL A A +G + ++++ + P
Sbjct: 333 -------------AGVTPNGVTFVGVLSACAHAGLWNEGLR-YFDVMRVDYHLEPQIEHY 378
Query: 489 GTALTDTYAKSGDIESSRRVFDRMP 513
G L D +SG +E + +MP
Sbjct: 379 G-CLVDLLGRSGQVEQALDTILKMP 402
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 148/278 (53%), Gaps = 12/278 (4%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+ N +I+ + G++ A ++++ M ER+ VSW +LISG ++ G+++ + F+ P +
Sbjct: 142 ITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDEMPCR 201
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
++SWT I G+ + G +AL +F ++ G++P+E++ S+ ACA++ +G +
Sbjct: 202 TIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIH 261
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
K+GF K+ V N+L+ + K G +D A +F++M ++DV+SW+ ++ G
Sbjct: 262 KYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHGKGY 321
Query: 268 EARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIV 322
A R+F++M + N V++ +++ +G E R F M Y +P + +
Sbjct: 322 AAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYGCL 381
Query: 323 LSALASLKALRSGMHVHA--HVLKIGIEKDVFISNALI 358
+ L RSG A +LK+ ++ D N+L+
Sbjct: 382 VDLLG-----RSGQVEQALDTILKMPMQPDSRTWNSLL 414
>gi|8920616|gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 343/646 (53%), Gaps = 53/646 (8%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G L+EA+ LF+ MPERN V+ A+++G++K R+ E+ F P +NV+SWT +
Sbjct: 194 GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALC 252
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+G S +A++LF ++ E N V+++++ D V F A + V
Sbjct: 253 DDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQV----FDAMPSRDVV 304
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
N++I ++ ++ A+ +F M +++VV+WT ++ + GD+ EA R+F EMPERN
Sbjct: 305 SWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 364
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFSIVLSALASLKA--LRSGM 336
VSW+ MI+ + + EA LF +M + + PN + A L R G
Sbjct: 365 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 424
Query: 337 HVHAHVLKIGIEK--------------------------------DVFISNALIDLYSKC 364
+HA V+ G E D+ N +I+ Y K
Sbjct: 425 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 484
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G+ + +F+ + K + VSW SMI GY G + A LF + ++ V+W+ +IS
Sbjct: 485 GDLERAETLFERV--KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMIS 542
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
G ++++ F ++ ++M+ G P ST+S +L ++ + ++L++GK +H I K Y
Sbjct: 543 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACY 602
Query: 485 --DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+ L +L YAK G IE + +F +M K+ +SW M+ GL+ G A +++NLF+E
Sbjct: 603 DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKE 662
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M + PN +T L VL ACSHSGL+ +GL+ F +M+ Y+I+P HY ++D+L R+G
Sbjct: 663 MLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAG 722
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGC----KTYKNEQIAERAVKNLWKLAEEHPAGYV 658
+L EAE+FI+++PF PD + +LL C + E IAERA L +L + G+V
Sbjct: 723 KLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHV 782
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L N+YA GR +RK M KG++K+ GCSWV V + + F
Sbjct: 783 ALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFL 828
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 229/484 (47%), Gaps = 82/484 (16%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+A ++ + D+V N MI I+ +EEA+ LF M E+N V+WT+++ G+ ++G
Sbjct: 290 KAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGD 349
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--SGVKPNEVTFSSIC 191
V E+ F P +N++SWTA I GF N EAL LFL++ + V PN T S+
Sbjct: 350 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLA 409
Query: 192 KACAEIN-DF-RLGLSVFGLIFKAGFEK-------------------------------- 217
AC + +F RLG + + G+E
Sbjct: 410 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF 469
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ CN +I LK G+++ A ++F+R++ D VSWT ++D ++E GD+ A +F ++
Sbjct: 470 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 529
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
+++ V+W+VMI+ Q+ EA L M R KP S +S++LS+ + L G
Sbjct: 530 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 589
Query: 337 HVHAHVLKIGI--EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
H+H + K + D+ + N+L+ +Y+KCG +D +F +V+KD VSWNSMI G
Sbjct: 590 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD---TVSWNSMIMG 646
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
+G ++A L F EML SG+ PN TF
Sbjct: 647 LSHHGLADKALNL-------------------------------FKEMLDSGKKPNSVTF 675
Query: 455 SSVLCASASVASLEKGKDLHGKI-----IKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
VL A + + +G +L + I+ G + + ++ D ++G ++ +
Sbjct: 676 LGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI----SMIDLLGRAGKLKEAEEFI 731
Query: 510 DRMP 513
+P
Sbjct: 732 SALP 735
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 18/192 (9%)
Query: 445 SGEIPNKSTF-------SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+ +IPN ++ +++ S L + L KI + G V T+L YA
Sbjct: 132 ANKIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYA 191
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K+G ++ +R +F+ MP++N ++ M+ G + E+ LF EM K N ++
Sbjct: 192 KTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTV 246
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
+L A G + ++ F+ M P N+ + +V L R+G + +A+ ++MP
Sbjct: 247 MLTALCDDGRSEDAVELFDEM-PERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMP-S 300
Query: 618 PDSNAWASLLSG 629
D +W +++ G
Sbjct: 301 RDVVSWNAMIKG 312
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/491 (36%), Positives = 276/491 (56%), Gaps = 2/491 (0%)
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V N LI + MG D AR FD + +D V W ++ + G L EARR+ + PERN
Sbjct: 142 VANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERN 201
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ +IA Y+++G P +A F M P+ LSA + LK L G +H
Sbjct: 202 VVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHL 261
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
V + I + ALID+Y+KCG+ + VFD++ WN++I GY G
Sbjct: 262 LVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPE--PWNAIIDGYCKLGH 319
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
++ A+ LFD M R+ ++++++I+GY+ + +F +M G + T S+L A
Sbjct: 320 VDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTA 379
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
AS+ +L G+ LH I + DV+LGTAL D Y K G ++ + VF RM +++ +W
Sbjct: 380 CASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTW 439
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T M+ GLA +G K+++ F +M++ P +T ++VL ACSHS L+D+G +FN M
Sbjct: 440 TAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRS 499
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
++ + P HY C++D+L+RSG L EA + +MP +P++ W S+LS C+ +KN +A
Sbjct: 500 LHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLAR 559
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
A ++L KLA E A YV L NIY + +W DA VR LM E+G++K+ G S + V QV
Sbjct: 560 HAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQV 619
Query: 701 HFFFQKTDHNP 711
H F +P
Sbjct: 620 HKFVANDQSHP 630
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 192/360 (53%), Gaps = 8/360 (2%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+V N +I+ G ++A+R FD +P ++ V W +I G ++ G ++E+ + P +
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 200
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV+SWT+ I G+ + G +A+ F +L GV P+EV AC+++ + LG +
Sbjct: 201 NVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLH 260
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDL 266
L+ + ++ +LI + K G++ A++VFD + + + W I+D + ++G +
Sbjct: 261 LLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHV 320
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR +FD+M R+ ++++ MI Y SG +A +LF QM R+ + + +L+A
Sbjct: 321 DVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTAC 380
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
ASL AL G +HA + + +E+DV++ AL+D+Y KCG + VF + E+DV
Sbjct: 381 ASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVH--- 437
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+W +MI G NG ++A E F M + V++ A+++ D FNEM
Sbjct: 438 TWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEM 497
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 314/589 (53%), Gaps = 18/589 (3%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L++ + K + + F+ P +N +WT I GF + G S LF ++ G PN
Sbjct: 330 LLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPN 389
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ T SS+ K C+ N+ +LG V + + G + V + NS++ L LK + A +F+
Sbjct: 390 QYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFE 449
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M + DVVSW +++ ++ GD+ ++ +F +P ++ VSW+ ++ Q GY A
Sbjct: 450 LMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQ 509
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
M + + FSI L +SL + G +H VLK G + D FI ++L+++Y K
Sbjct: 510 LYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCK 569
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG R+ SI+ +DV L+ + + PK VSW +++
Sbjct: 570 CG-----RMDKASIILRDVP-------------LDVLRKGNARVSYKEPKAGIVSWGSMV 611
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
SGY+ + +++ F M+ + + T ++++ A A+ LE G+ +H + K+G
Sbjct: 612 SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHR 671
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D ++G++L D Y+KSG ++ + VF + + N + WT M+ G A G +I LFEEM
Sbjct: 672 IDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEM 731
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
I PNE+T L VL ACSH+GL+++G +YF M+ Y I P H T +VD+ R+G
Sbjct: 732 LNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGH 791
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L++ ++FI ++ W S LS C+ +KN ++ + + L ++A P YVLLSN+
Sbjct: 792 LTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNM 851
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
AS RW +A VR LM ++G++K G SW+++++Q+H F +P+
Sbjct: 852 CASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQ 900
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 210/423 (49%), Gaps = 52/423 (12%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V+ N +++ ++ E A+RLF+ M E + VSW +I +++ G VE+S+ F R P
Sbjct: 424 DVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLP 483
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+++V+SW + G +Q G+ AL+ ++E G + + VTFS + ++ LG
Sbjct: 484 YKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQ 543
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G++ K GF+ + +SL+ + K G RM+K ++ V LDV +
Sbjct: 544 LHGMVLKFGFDSDGFIRSSLVEMYCKCG----------RMDKASIILRDVPLDVLRK--- 590
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
G AR + E P+ VSW M++ Y +G E+ + FR M R + + ++SA
Sbjct: 591 -GNARVSYKE-PKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISA 648
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+ L G HVHA+V KIG D ++ ++LID+YSK G D +VF + + ++
Sbjct: 649 CANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFR---QSNEPNI 705
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V W SMI GY L+GQ A LF+ EML
Sbjct: 706 VMWTSMISGYALHGQGMHAIGLFE-------------------------------EMLNQ 734
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD--VFLGTALTDTYAKSGDIE 503
G IPN+ TF VL A + +E+G + +++K + + V T++ D Y ++G +
Sbjct: 735 GIIPNEVTFLGVLNACSHAGLIEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLT 793
Query: 504 SSR 506
++
Sbjct: 794 KTK 796
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 210/441 (47%), Gaps = 52/441 (11%)
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++ L K G + ++ N L+TL K + A+ +FD + +R+ +WT
Sbjct: 310 TLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWT---------- 359
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
++I+ + ++G E F LFR+M PN S VL
Sbjct: 360 ---------------------ILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLK 398
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ L+ G VHA +L+ GI+ DV + N+++DLY KC + +F+ + E D
Sbjct: 399 CCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGD--- 455
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VVSWN MIG Y G +E++ ++F +P ++ VSW+ I+ G L+ M+
Sbjct: 456 VVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVE 515
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G + TFS L ++S++ +E G+ LHG ++K GF D F+ ++L + Y K G ++
Sbjct: 516 CGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDK 575
Query: 505 SR----------------RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+ RV + P +SW MV G +G ++ + F M + +
Sbjct: 576 ASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELV 635
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+ T+ +++ AC+++G+++ G ++ I + + + + ++DM S+SG L +A
Sbjct: 636 VVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH-RIDAYVGSSLIDMYSKSGSLDDAW 694
Query: 609 DFINSMPFEPDSNAWASLLSG 629
+ EP+ W S++SG
Sbjct: 695 -MVFRQSNEPNIVMWTSMISG 714
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 319/586 (54%), Gaps = 70/586 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + K R++ + FE + + +SW + I G+ + G E LKL +K+ +G++ N
Sbjct: 151 LIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLN 210
Query: 184 EVTFSSICKAC-AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
T S K+C +N+ VS +L ++K G +DL
Sbjct: 211 AFTLGSALKSCYLNLNNM------------------VSYGKTLHGYTVKQG-LDL----- 246
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE---- 298
D+V T +LD++ + G LG+A ++F P +N V ++ MIA + Q+ +
Sbjct: 247 ------DIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECA 300
Query: 299 -EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EA +LF QM R KP+ FS ++ ++A G +HAH+ K I+ D FI + L
Sbjct: 301 YEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTL 360
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
I+LYS G T E+ + F++ PK + V
Sbjct: 361 IELYSLLGST----------------------------------EDQLKCFNSTPKLDIV 386
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW+ +I+GY ++ QF+ A+F E+L SG+ P++ +++L A A VA+ G+ +HG
Sbjct: 387 SWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYA 446
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+K G + + YAKSG+++S++ F+ + + + +SW+VM+ A+ G+AK++I
Sbjct: 447 VKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAI 506
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
NLFE M+ I PN++T L VL ACSH GLV++GL+Y+ SM+ Y++K N +H TC+VD+
Sbjct: 507 NLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDL 566
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
LSR+GRL +A++FI + F W +LLSGC+ YK+ + + L +L + + Y
Sbjct: 567 LSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSY 626
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
VLL NIY AG + A +R+LM ++G+RK G SW+EV N+VH F
Sbjct: 627 VLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSF 672
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 195/413 (47%), Gaps = 48/413 (11%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G++G A+++FD M ER+ +S++++I+ Y G+ +A LF + K + ++ VL
Sbjct: 58 GEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVL 117
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA +K G +H + G+ + VF++N LID+Y KC RL+F+S E D
Sbjct: 118 SACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELD-- 175
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSWNS+I GY G EE +L M H L
Sbjct: 176 -NVSWNSLITGYARVGAYEEMLKLLVKM----------------HHTGLRL--------- 209
Query: 444 LSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
N T S L C + GK LHG +K G D+ +GTAL D YAK+G
Sbjct: 210 ------NAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGY 263
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAES-----GYAKESINLFEEMEKTSITPNELTIL 556
+ + ++F P++N + + M+ G ++ A E++ LF +M++ I P++ T
Sbjct: 264 LGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFS 323
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
S++ C+H + G K ++ +NI+ + + ++++ S G + NS P
Sbjct: 324 SIIKICNHIEAFEYG-KQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTP- 381
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL--AEEHPAGYVLLSNIYASA 667
+ D +W ++++G Y E A+ ++L + + P +++ + + A A
Sbjct: 382 KLDIVSWTTMIAG---YAQNGQFESALALFYELLASGKKPDEFIITTMLSACA 431
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 176/418 (42%), Gaps = 80/418 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG I G+ ++ +LT L+ MY + A + + + D V N +I +
Sbjct: 129 GKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYAR 188
Query: 100 WGNLEEAQRLFDGMPE---------------------RNEVSW----------------- 121
G EE +L M N VS+
Sbjct: 189 VGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDI 248
Query: 122 ---TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN-----GFSFEALKLFL 173
TAL+ + K G + +++ F +P QNV+ + A I GF+Q ++EALKLF
Sbjct: 249 VVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFS 308
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
++ G+KP++ TFSSI K C I F G + I K + + ++LI L +G
Sbjct: 309 QMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLG 368
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+ F+ K D+VSWT MIA Y Q
Sbjct: 369 STEDQLKCFNSTPKLDIVSWT-------------------------------TMIAGYAQ 397
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
+G E A LF ++ KP+ + +LSA A + A RSG VH + +K GI +
Sbjct: 398 NGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIV 457
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
N+ I +Y+K G ++ F+ I D VVSW+ MI +G ++A LF+ M
Sbjct: 458 QNSQISMYAKSGNLDSAKITFEEIKNPD---VVSWSVMICSNAQHGHAKDAINLFELM 512
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 169/406 (41%), Gaps = 80/406 (19%)
Query: 35 NLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMI 94
N+V G+ LHG+ +K G+ + + T LL MY + +A ++ + ++V++N MI
Sbjct: 227 NMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMI 286
Query: 95 NANIQWGNLE-----EAQRLFDGMP----------------------------------- 114
IQ +++ EA +LF M
Sbjct: 287 AGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHIC 346
Query: 115 ----ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALK 170
+ +E + LI + G E+ + F P +++SWT I G+ QNG AL
Sbjct: 347 KHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALA 406
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL 230
LF +LL SG KP+E +++ ACA++ R G V G K G V NS I++
Sbjct: 407 LFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYA 466
Query: 231 KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
K G +D A+ F+ ++ DVVSW SVMI
Sbjct: 467 KSGNLDSAKITFEEIKNPDVVSW-------------------------------SVMICS 495
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEK 349
Q G+ ++A LF M Y PN F VL+A + + G+ + + K ++
Sbjct: 496 NAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKI 555
Query: 350 DVFISNALIDLYSKCGETKDGR-LVFDSIVEKDVAHVVSWNSMIGG 394
+V ++DL S+ G D + + +S H V W +++ G
Sbjct: 556 NVKHCTCIVDLLSRAGRLLDAKNFILNSGFGD---HPVMWRTLLSG 598
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 110/236 (46%), Gaps = 14/236 (5%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
++ ++ S+ S GK H +IK F +FL + Y+K G++ +++++FDRM
Sbjct: 11 AYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRM 70
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
+++ IS+ +++ G G+ ++I LF E + ++ + VL AC + D L
Sbjct: 71 SERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ--IKDFAL 128
Query: 573 -KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-C 630
K + + + + ++DM + R+ A S E D+ +W SL++G
Sbjct: 129 GKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSD-ELDNVSWNSLITGYA 187
Query: 631 KTYKNEQIAERAVK--------NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
+ E++ + VK N + L + Y+ L+N+ S G+ + V++
Sbjct: 188 RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNM-VSYGKTLHGYTVKQ 242
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 309/535 (57%), Gaps = 38/535 (7%)
Query: 197 INDFRLG-LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
IND+R +S+ F + +V+ CN +IT K G + AR +FD M + DV++WT
Sbjct: 46 INDYRTAKISIPRKDFTV--DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTT 103
Query: 256 ILDVFIEMGDLGEARRIFDEM-PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++ +I+ G + EARR+FD + ++N V+W+ M+ Y +S +A +LF +M
Sbjct: 104 VISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP----NK 159
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N ++ ++ A + S M++ + E++V N ++ + ++CG ++ R +F
Sbjct: 160 NVVSWNTMIDGYAQNGRIDSAMYLFEKM----PERNVVSWNTVMSMLAQCGRIEEARRLF 215
Query: 375 DSIVEKDVA-----------------------HVVSWNSMIGGYGLNGQMEEAKELFDNM 411
D + E+DV + SWN+MI G NG + A++LF+ M
Sbjct: 216 DRMPERDVISWTAMIAGLLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEM 275
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLEKG 470
PK+N +SW+ +I+G ++ + + +F+ ML +G PN+ TF SVL A +++A L +G
Sbjct: 276 PKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEG 335
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR--MPDKNEISWTVMVRGLA 528
+ +H I K + F+ +AL + Y+K G++ ++R++FD ++ +SW ++ A
Sbjct: 336 QQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYA 395
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
GY KE+IN F+EM K+ P+++T + +L ACSH+GLV++GLKYF+ + +I
Sbjct: 396 HHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVRE 455
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY C+VD+ R+GRL EA FI + +P + W +LL+GC + N +I ++A K L +
Sbjct: 456 DHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLE 515
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+ E+ Y+LLSNIYAS G+W +A VR M +KGL+K GCSW+EV N+VH F
Sbjct: 516 VEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVF 570
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 231/482 (47%), Gaps = 54/482 (11%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM-PERNEVSWTALISGFMKH 131
+EA + ++ D++ +I+ I+ G +EEA+RLFD + ++N V+WTA++ G+++
Sbjct: 84 MEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRS 143
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
++ ++ F P +NV+SW I G+ QNG A+ LF K+ E V S +
Sbjct: 144 NKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLA 203
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
+ C I + R +F E+ V ++I G +D A +F+RM +RD+
Sbjct: 204 Q-CGRIEEAR-------RLFDRMPERDVISWTAMIA-----GLLDEALDLFERMPERDLP 250
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRY 310
SW ++ I+ GDL AR++F+EMP++N +SW+ MI Q G EEA ++F R ++
Sbjct: 251 SWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTN 310
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
KPN F VL A ++L L G VH + K + F+ +ALI++YSKCGE
Sbjct: 311 GAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTA 370
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGY 426
R +FD + +VSWN +I Y +G +EA F M K +DV++ ++S
Sbjct: 371 RKMFDDGMTSQ-RDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSAC 429
Query: 427 LEHKQFDLVFAVFNEMLLSGEI---------------------------------PNKST 453
+ F+E++ I P+
Sbjct: 430 SHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARV 489
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ ++L A+++ GK K++++ P + L++ YA +G + RV +M
Sbjct: 490 WGALLAGCNVHANVKIGKQAAKKLLEVE-PENAGTYLLLSNIYASTGKWREAARVRLKMK 548
Query: 514 DK 515
DK
Sbjct: 549 DK 550
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 178/415 (42%), Gaps = 102/415 (24%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y+ S K +A ++ ++ ++V N MI+ Q G ++ A LF+ MPERN VSW ++
Sbjct: 140 YIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVM 199
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAIC--------------------------GF 159
S + GR+EE+ F+R P ++VISWTA I G
Sbjct: 200 SMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDLFERMPERDLPSWNTMITGL 259
Query: 160 VQNGF-------------------------------SFEALKLFLKLLES-GVKPNEVTF 187
+QNG S EALK+F ++L + G KPN+ TF
Sbjct: 260 IQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTF 319
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR--M 245
S+ AC+ + G V +I K ++ V ++LI + K GE+ AR +FD
Sbjct: 320 VSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMT 379
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
+RD+VSW I IA Y GY +EA F+
Sbjct: 380 SQRDLVSWNGI-------------------------------IAAYAHHGYGKEAINFFK 408
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK---IGIEKDVFISNALIDLYS 362
+M + FKP+ + +LSA + + G+ ++K I + +D + L+DL
Sbjct: 409 EMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYA--CLVDLCG 466
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM----EEAKELFDNMPK 413
+ G K+ + + K A V W +++ G ++ + + AK+L + P+
Sbjct: 467 RAGRLKEAFGFIERLETKPSARV--WGALLAGCNVHANVKIGKQAAKKLLEVEPE 519
>gi|359491917|ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 767
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 222/758 (29%), Positives = 364/758 (48%), Gaps = 113/758 (14%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
+K+ S + R LH LI G+ +L LL MY
Sbjct: 1 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMY--------------------- 39
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
NC G + +A R+F G+ N SW +ISGF G++ E+ FE+ P +
Sbjct: 40 --SNC--------GLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPER 89
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ +SW + + G+ NG +K+F+ ++ + P+ +FS + KA + +L L +
Sbjct: 90 DSVSWNSMMSGYFHNGELEATIKVFVSMVRDCCCVPDPFSFSCVMKASGSLGYLKLALQL 149
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G K F V S++ + +K G +D A+ VF R + W ++ + + G +
Sbjct: 150 HGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSV 209
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A +F +MPER+ VSW+ MI+ +Q G+ E F +M F+PN+ ++ VLSA
Sbjct: 210 KKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSAC 269
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
S+ L G H+HA ++++ DV+ LID+Y+KCG + R VFD + E + V
Sbjct: 270 TSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHN---AV 326
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNM---PKRND-VSWSAIISGYLEHKQFDLVFAVFNEM 442
SW S+IGG G EEA LF+ M P +D + + ++ L K + E
Sbjct: 327 SWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISI-----GEQ 381
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDL--HGKIIKLGFPYDVFLGTALTDTYAKSG 500
L + I + SSV A+A V K D+ +L D+ TA+ ++++G
Sbjct: 382 LHAHTI-TRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAG 440
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
D+E +R FD+MP++N ISW M+ + GY +E + ++ +M + + + +T + +
Sbjct: 441 DVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSIS 500
Query: 561 AC-----------------------------------SHSGLVDKGLKYFNSM------- 578
AC S G +++ K F+S+
Sbjct: 501 ACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVS 560
Query: 579 ---------------------EPIYNIK--PNGRHYTCVV-DMLSRSGRLSEAEDFINSM 614
E + NI P+ Y V+ D+L R+G+L +A++ IN M
Sbjct: 561 WNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSDLLGRAGQLEQAKNLINQM 620
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
PF+P++ W +LL+ C+ + N ++AE AVKNL +L E P Y LL+NIY+ +G+
Sbjct: 621 PFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVT 680
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NVRKLM +KG+RK+ GCSW+EV N+VH F ++P+
Sbjct: 681 NVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQ 718
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 185/630 (29%), Positives = 338/630 (53%), Gaps = 36/630 (5%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G + V+ N +I+ I+ + A+++F + + + SW +I G+ K + ++ F +
Sbjct: 25 GNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSWNCMIYGYSKLHEMGRAIDTFRQ 84
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P ++ +SW I F +G ++L F+++ G +PN +T++S+ ACA I DF+ G
Sbjct: 85 MPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYDFQWG 144
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIE 262
KH+ AR V R+E DV+ ++D++ +
Sbjct: 145 -------------KHLH-----------------ARIV--RVEPFLDVLVGNGLVDMYAK 172
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + ++R+F+ + E N V+W+ +I+ G EE + +F QM + + + +
Sbjct: 173 CGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATI 232
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L + G +H +K G+ V + NA + +Y+KCG+ + L F+++ DV
Sbjct: 233 LGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDV 292
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+SW +MI + +G +E A++ F+ MP+RN +SW+A++ Y ++ ++ ++ M
Sbjct: 293 ---ISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILM 349
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L P+ TF +++ A + +A + G + + +K+G DV + + Y++ G I
Sbjct: 350 LRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRI 409
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
E ++ +FD + +KN ISW ++ G A++G + I +F+ M P+ +T +++L C
Sbjct: 410 EEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGC 469
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SHSGLV + +FNSM + I H+ C+VD+ R+G L A D I+ MPF+P+++
Sbjct: 470 SHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASI 529
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LLS C+ + + ++AE A+KNL +L E+ Y+LL+N Y+S GR VR++M E
Sbjct: 530 WGALLSACRIHHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKE 589
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
K ++K GCSW+EV N+VH F +P+
Sbjct: 590 KRVQKDPGCSWIEVCNRVHVFTANDTSHPQ 619
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 227/441 (51%), Gaps = 13/441 (2%)
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
AC+ + R+ + GL K GF + + NS+I + +K + A VF R+EK + S
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W ++ + ++ ++G A F +MPER+ VSW+ +I+ ++ G ++ F +M
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+PN+ ++ VLSA A++ + G H+HA ++++ DV + N L+D+Y+KCG +
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
VF+++ E + VV+W S+I G G EE ++F M K + + I++ L +
Sbjct: 182 VFNTLREHN---VVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEG 238
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF----PYDVFL 488
+ ++ + L G SSV +A+++ K D L F +DV
Sbjct: 239 ETNISIGEQ--LHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKA--SLAFETMAAHDVIS 294
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
T + +++ SG++E +R F+RMP++N ISW M+ ++ + +E + L+ M + +
Sbjct: 295 WTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEV 354
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+ +T ++++ ACS + G + + + + + + + SR GR+ EA+
Sbjct: 355 RPDWITFVTMIGACSELAISKLGTQILSQAVKV-GLGSDVSVVNSAITLYSRCGRIEEAQ 413
Query: 609 DFINSMPFEPDSNAWASLLSG 629
+ +S+ E + +W S++ G
Sbjct: 414 NLFDSIQ-EKNLISWNSIMGG 433
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 35/274 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG +KTG++ + L MY +A+ + + D++ MI +
Sbjct: 245 GEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSH 304
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+E A+ F+ MPERN +SW A++ +
Sbjct: 305 SGNVERARDYFNRMPERNVISWNAMLG-------------------------------AY 333
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QN F E LKL++ +L V+P+ +TF ++ AC+E+ +LG + K G V
Sbjct: 334 CQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDV 393
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM--- 276
SV NS ITL + G ++ A+++FD +++++++SW I+ + + G+ + IF M
Sbjct: 394 SVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMA 453
Query: 277 -PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+ + +++ +++ + SG +EA F MT+
Sbjct: 454 GCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTK 487
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 287/512 (56%), Gaps = 40/512 (7%)
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME----KRDVVSWTVILDV 259
L V LI E ++ + ++ + ++ R++ ++ + D+V IL++
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + G L EA+ +FD+MP ++ VSW+V+I+ Y+QSG EA LF +M F+PN
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
S +L A + + G +HA LK G + +V + ++L+D+Y++ ++ +++F+S+
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
K+ VVSWN++I G+ G+ E V +F
Sbjct: 270 KN---VVSWNALIAGHARKGEGEH-------------------------------VMRLF 295
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+ML G P T+SSVL A AS SLE+GK +H +IK G ++G L D YAKS
Sbjct: 296 XQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 354
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G I+ +++VF R+ ++ +SW ++ G A+ G E++ LFE+M K + PNE+T LSVL
Sbjct: 355 GSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVL 414
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSHSGL+D+G YF M+ + I+ H+ VVD+L R+GRL+EA FI MP +P
Sbjct: 415 TACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPT 473
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ W +LL C+ +KN + A + +++L +VLLSNIYASAGR DA VRK+
Sbjct: 474 AAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKM 533
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
M E G++K CSWVE+ N+VH F D +P
Sbjct: 534 MKESGVKKEPACSWVEIENEVHVFVANDDSHP 565
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 213/507 (42%), Gaps = 136/507 (26%)
Query: 10 SINPE-TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLG 68
S+ PE T ++ + C L K + QGRA+H H+ +
Sbjct: 100 SLEPERTLYSKMLNKCTYLRK-------LKQGRAIHAHIQSSTFED-------------- 138
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
DLV+ N ++N + G+LEEAQ LFD MP ++ VSWT LISG
Sbjct: 139 -----------------DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG- 180
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
+ Q+G + EAL LF K+L G +PNE T S
Sbjct: 181 ------------------------------YSQSGQASEALALFPKMLHLGFQPNEFTLS 210
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
S+ KA G + K G++ +V V +SL+ + + + A+ +F+ + +
Sbjct: 211 SLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK 270
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
+VVSW + +IA + + G E RLF QM
Sbjct: 271 NVVSW-------------------------------NALIAGHARKGEGEHVMRLFXQML 299
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
R F+P +S VL A AS +L G VHAHV+K G + +I N LID+Y+K G K
Sbjct: 300 RQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 358
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
D + VF +V++D +VSWNS+I GY +G EA +LF+
Sbjct: 359 DAKKVFRRLVKQD---IVSWNSIISGYAQHGLGAEALQLFE------------------- 396
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ML + PN+ TF SVL A + L++G+ + K V
Sbjct: 397 ------------QMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAH 444
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDK 515
+ D ++G + + + + MP K
Sbjct: 445 HVTVVDLLGRAGRLNEANKFIEEMPIK 471
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 32/285 (11%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ +H H+IK+G Y+ L+ MY S +A ++ + L D+V N +I+
Sbjct: 324 QGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYA 383
Query: 99 QWGNLEEAQRLFDGM----PERNEVSWTALISGFMKHGRVEESMWYFE---RNPFQNVIS 151
Q G EA +LF+ M + NE+++ ++++ G ++E +YFE ++ + ++
Sbjct: 384 QHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVA 443
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ + F++ E +KP + ++ AC + LG+ IF
Sbjct: 444 HHVTVVDLLGRAGRLNEANKFIE--EMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIF 501
Query: 212 KAGFEKHVSVCNSLIT-LSLKMGEVDLARSVFDRM-----EKRDVVSWTVI---LDVFIE 262
+ + H S + L++ + G + A V M +K SW I + VF+
Sbjct: 502 E--LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVA 559
Query: 263 MGDLGEARRIFDEMPERNEVS--WSVMIARYNQSGY-PEEAFRLF 304
D P R E+ W + + + GY P+ + LF
Sbjct: 560 ND---------DSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLF 595
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 340/692 (49%), Gaps = 71/692 (10%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI----VKDL 82
L++ S L + L ++ +GI ++Y L SR +I VK
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
DL V N +++ + G L+ A+++FD M ERN
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN------------------------- 199
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFR 201
V+SWT+ ICG+ + F+ +A+ LF +++ + V PN VT + ACA++ D
Sbjct: 200 ------VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE 253
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V+ I +G E + + ++L+ + +K +D+A+
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK---------------------- 291
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
R+FDE N + M + Y + G EA +F M +P+
Sbjct: 292 ---------RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+S+ + L+ + G H +VL+ G E I NALID+Y KC +FD + K
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V V+WNS++ GY NG+++ A E F+ MP++N VSW+ IISG ++ F+ VF
Sbjct: 403 V---VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 442 ML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M G + T S+ A + +L+ K ++ I K G DV LGT L D +++ G
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
D ES+ +F+ + +++ +WT + +A +G A+ +I LF++M + + P+ + + L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSH GLV +G + F SM ++ + P HY C+VD+L R+G L EA I MP EP+
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W SLL+ C+ N ++A A + + LA E YVLLSN+YASAGRW D VR M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
EKGLRK G S +++R + H F + +P+
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 245/573 (42%), Gaps = 121/573 (21%)
Query: 141 FERNPFQNVISW------TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
F + F+N S+ + I G+ +G EA+ LFL+++ SG+ P++ TF AC
Sbjct: 85 FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC 144
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A+ G+ + GLI K G+ K + V NSL+ + GE+D AR VFD M +R+VVSWT
Sbjct: 145 AKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFK 313
MI Y + + ++A LF +M R
Sbjct: 205 -------------------------------SMICGYARRDFAKDAVDLFFRMVRDEEVT 233
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
PN+ V+SA A L+ L +G V+A + GIE + + +AL+D+Y KC
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC--------- 284
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
++ AK LFD N +A+ S Y+
Sbjct: 285 -------------------------NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
VFN M+ SG P++ + S + + + + ++ GK HG +++ GF + AL
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 494 DTYAKSGDIESSRRVFDR-------------------------------MPDKNEISWTV 522
D Y K +++ R+FDR MP+KN +SW
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 523 MVRGLAESGYAKESINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ GL + +E+I +F M+ + + + +T++S+ AC H G +D +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY------ 493
Query: 582 YNIKPNG-----RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
Y I+ NG R T +VDM SR G A NS+ D +AW + + N
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGN- 551
Query: 637 QIAERAVKNLWKLAEE--HPAGYVLLSNIYASA 667
AERA++ + E+ P G + + A +
Sbjct: 552 --AERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 110/200 (55%), Gaps = 2/200 (1%)
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLEHKQFDLVF 436
++ DV+ + + G + AKE+F+N ++++I GY +
Sbjct: 60 LDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F M+ SG P+K TF L A A + G +HG I+K+G+ D+F+ +L Y
Sbjct: 120 LLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY 179
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTI 555
A+ G+++S+R+VFD M ++N +SWT M+ G A +AK++++LF M + +TPN +T+
Sbjct: 180 AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 556 LSVLFACSHSGLVDKGLKYF 575
+ V+ AC+ ++ G K +
Sbjct: 240 VCVISACAKLEDLETGEKVY 259
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 179/428 (41%), Gaps = 53/428 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +C++ + G ++ + +GI + + L+ MY+ A + +
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PERNEV----------------- 119
+L + N M + ++ G EA +F+ M P+R +
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 120 ------------SW----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
SW ALI +MK R + + F+R + V++W + + G+V+NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVC 222
A + F E+ + N V++++I + + F + VF + + G
Sbjct: 418 EVDAAWETF----ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
S+ + +G +DLA+ ++ +EK DV T ++D+F GD A IF+ +
Sbjct: 474 MSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
R+ +W+ I +G E A LF M KP+ F L+A + ++ G +
Sbjct: 534 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 339 HAHVLKI-GIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYG 396
+LK+ G+ + ++DL + G ++ +L+ D +E + V WNS++
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN---DVIWNSLLAACR 650
Query: 397 LNGQMEEA 404
+ G +E A
Sbjct: 651 VQGNVEMA 658
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 203/688 (29%), Positives = 321/688 (46%), Gaps = 138/688 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL++ +NL + R +HGH++KTG H+ D
Sbjct: 70 LLQECIDRNLATEARMIHGHIVKTGFHE-------------------------------D 98
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V ++N + G +E A ++FD + P
Sbjct: 99 LFVMTFLVNVYSKCGVMESAHKVFDNL-------------------------------PR 127
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NV +WT + G+VQN AL+LF+K+LE+G P+ T + AC+ + G V
Sbjct: 128 RNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQV 187
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K + S+ NSL + K ++ A F ++++DV+S
Sbjct: 188 HAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVIS-------------- 233
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
W+ +I+ +G + F M KPN + VLSA
Sbjct: 234 -----------------WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSAC 276
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ L G +H+ +K+G + I N+++ LY KCG
Sbjct: 277 CVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCG--------------------- 315
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE-----------HKQFDLV 435
W + EA++LF+ M N V+W+A+I+G+ + HK
Sbjct: 316 -W------------LIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 362
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
A+F ++ SG P+ TFSSVL +++ +LE+G+ +HG+IIK G DV +GTAL
Sbjct: 363 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSM 422
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G I+ + + F MP + ISWT M+ G A G +++++ LFE+M I PN++T
Sbjct: 423 YNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTF 482
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+ VL ACSH+GL D+ L YF M+ YNIKP H+ C++DM R GR+ EA D ++ M
Sbjct: 483 VGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN 542
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
FEP+ W+ L++GC+++ + A + L KL + YV L N++ SAGRW D
Sbjct: 543 FEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSK 602
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
VRKLM E+ + K SW+ ++ +V+ F
Sbjct: 603 VRKLMKEEKVGKLKDWSWISIKEKVYSF 630
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 196/462 (42%), Gaps = 78/462 (16%)
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G + + + + C + N + G I K GF + + V L+ + K G ++ A
Sbjct: 59 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VFD + +R+V +WT +L Y Q+ +P
Sbjct: 119 HKVFDNLPRRNVNAWTTLL-------------------------------TGYVQNSHPL 147
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A +LF +M P+ IVL+A +SL+++ G VHA+++K I+ D I N+L
Sbjct: 148 LALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLS 207
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
YSK + F I EKD V+SW S+I NGQ +
Sbjct: 208 SFYSKFRRLEFAIKAFKIIKEKD---VISWTSVISSCCDNGQAARS-------------- 250
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
+ F +ML G PN+ T +SVL A + +L+ G +H I
Sbjct: 251 -----------------LSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSI 293
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG------LAESGY 532
KLG+ + + ++ Y K G + ++++F+ M N ++W M+ G LAE
Sbjct: 294 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 353
Query: 533 AKE-----SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A ++ +F+++ ++ + P+ T SVL CS+ +++G + + + +
Sbjct: 354 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIK-SGVLAD 412
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T +V M ++ G + +A MP +W S+++G
Sbjct: 413 VVVGTALVSMYNKCGSIDKASKAFLEMP-SRTMISWTSMITG 453
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 267/466 (57%), Gaps = 35/466 (7%)
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ D+V +L+++ + G L EAR++F++MP+R+ V+W+ +I+ Y+Q P +A F Q
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R+ + PN S V+ A A+ + G +H +K G + +V + +AL+DLY++
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR--- 208
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
YGL M++A+ +FD + RNDVSW+A+I+G+
Sbjct: 209 ----------------------------YGL---MDDAQLVFDALESRNDVSWNALIAGH 237
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+ +F ML G P+ +++S+ A +S LE+GK +H +IK G
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F G L D YAKSG I +R++FDR+ ++ +SW ++ A+ G+ KE++ FEEM +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PNE++ LSVL ACSHSGL+D+G Y+ M+ I P HY VVD+L R+G L+
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A FI MP EP + W +LL+ C+ +KN ++ A +++++L + P +V+L NIYAS
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
GRW DA VRK M E G++K CSWVE+ N +H F + +P+
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQ 522
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 201/445 (45%), Gaps = 66/445 (14%)
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
S LE + I D ++ ++ C + + G + A + + + V L++ +
Sbjct: 47 SSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTLLNMY 105
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
K G +EE+ FE+ P ++ ++WT I G+ Q+ +AL F ++L G PNE T S
Sbjct: 106 AKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLS 165
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
S+ KA A G + G K GF+ +V V ++L+ L + G +D A+ VFD +E R
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
N+VSW+ +IA + + E+A LF+ M
Sbjct: 226 -------------------------------NDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
R F+P+ ++ + A +S L G VHA+++K G + F N L+D+Y+K G
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
D R +FD + ++D VVSWNS++ Y +G +EA V W
Sbjct: 315 DARKIFDRLAKRD---VVSWNSLLTAYAQHGFGKEA------------VWW--------- 350
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
F EM G PN+ +F SVL A + L++G + + K G + +
Sbjct: 351 ----------FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 489 GTALTDTYAKSGDIESSRRVFDRMP 513
+ D ++GD+ + R + MP
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMP 425
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE-KGKDLHGKIIKLGFPYDVFLGTA 491
DL+ + L IP F + L +V L +G+ +H I++ F +D+ +G
Sbjct: 41 DLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNT 100
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L + YAK G +E +R+VF++MP ++ ++WT ++ G ++ +++ F +M + +PN
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 552 ELTILSVLFACS--HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
E T+ SV+ A + G L F N + ++D+ +R G + +A+
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVK---CGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 610 FINSMPFEPDSNAWASLLSG 629
+++ D +W +L++G
Sbjct: 218 VFDALESRNDV-SWNALIAG 236
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 130/324 (40%), Gaps = 47/324 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG +K G ++ + LL +Y +A + L + V N +I + +
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALI-----SGFMKHGR----------------- 133
E+A LF GM + S+ +L +GF++ G+
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 134 -------------VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+ ++ F+R ++V+SW + + + Q+GF EA+ F ++ G+
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+PNE++F S+ AC+ G + L+ K G +++ L + G+++ A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 241 VFDRMEKRDVVS-WTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ M + W +L+ E+G A +F+ P+ + ++ Y
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYA-AEHVFELDPD-DPGPHVILYNIYASG 477
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSC 318
G +A R+ ++M K +C
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPAC 501
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 203/688 (29%), Positives = 321/688 (46%), Gaps = 138/688 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL++ +NL + R +HGH++KTG H+ D
Sbjct: 64 LLQECIDRNLATEARMIHGHIVKTGFHE-------------------------------D 92
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V ++N + G +E A ++FD + P
Sbjct: 93 LFVMTFLVNVYSKCGVMESAHKVFDNL-------------------------------PR 121
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NV +WT + G+VQN AL+LF+K+LE+G P+ T + AC+ + G V
Sbjct: 122 RNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQV 181
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K + S+ NSL + K ++ A F ++++DV+S
Sbjct: 182 HAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVIS-------------- 227
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
W+ +I+ +G + F M KPN + VLSA
Sbjct: 228 -----------------WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSAC 270
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ L G +H+ +K+G + I N+++ LY KCG
Sbjct: 271 CVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCG--------------------- 309
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE-----------HKQFDLV 435
W + EA++LF+ M N V+W+A+I+G+ + HK
Sbjct: 310 -W------------LIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 356
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
A+F ++ SG P+ TFSSVL +++ +LE+G+ +HG+IIK G DV +GTAL
Sbjct: 357 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSM 416
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G I+ + + F MP + ISWT M+ G A G +++++ LFE+M I PN++T
Sbjct: 417 YNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTF 476
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+ VL ACSH+GL D+ L YF M+ YNIKP H+ C++DM R GR+ EA D ++ M
Sbjct: 477 VGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN 536
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
FEP+ W+ L++GC+++ + A + L KL + YV L N++ SAGRW D
Sbjct: 537 FEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSK 596
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
VRKLM E+ + K SW+ ++ +V+ F
Sbjct: 597 VRKLMKEEKVGKLKDWSWISIKEKVYSF 624
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 196/462 (42%), Gaps = 78/462 (16%)
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G + + + + C + N + G I K GF + + V L+ + K G ++ A
Sbjct: 53 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VFD + +R+V +WT +L Y Q+ +P
Sbjct: 113 HKVFDNLPRRNVNAWTTLL-------------------------------TGYVQNSHPL 141
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A +LF +M P+ IVL+A +SL+++ G VHA+++K I+ D I N+L
Sbjct: 142 LALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLS 201
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
YSK + F I EKD V+SW S+I NGQ +
Sbjct: 202 SFYSKFRRLEFAIKAFKIIKEKD---VISWTSVISSCCDNGQAARS-------------- 244
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
+ F +ML G PN+ T +SVL A + +L+ G +H I
Sbjct: 245 -----------------LSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSI 287
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG------LAESGY 532
KLG+ + + ++ Y K G + ++++F+ M N ++W M+ G LAE
Sbjct: 288 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 347
Query: 533 AKE-----SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A ++ +F+++ ++ + P+ T SVL CS+ +++G + + + +
Sbjct: 348 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIK-SGVLAD 406
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T +V M ++ G + +A MP +W S+++G
Sbjct: 407 VVVGTALVSMYNKCGSIDKASKAFLEMP-SRTMISWTSMITG 447
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 203/653 (31%), Positives = 334/653 (51%), Gaps = 81/653 (12%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM-PERNEVSWTAL 124
Y+ S + +A + + GFD N MI A + L++A+ LF GM R+ VSW L
Sbjct: 83 YVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAIL 142
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
++G+ +H R+EE+ F R P + ++ T+ + G+ NG EA +LF ++ +G
Sbjct: 143 VAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAG----- 197
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
++ + CN++I K VDLA +F +
Sbjct: 198 -------------------------------DRDATACNAMIAAYGKNARVDLAEGLFAQ 226
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
++ R+ SW+++L + + G L A++ FD MP+R+ ++++ M A + G R
Sbjct: 227 IKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQG----ELRGA 282
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
R+M RY LSA+ DV NAL++ YS+
Sbjct: 283 REMLRY------------LSAV-----------------------DVIAWNALLEGYSRT 307
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G+ + R +F ++ + VA V +++ YG G++++A+ + D MP R VSW+A+I+
Sbjct: 308 GDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIA 367
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FP 483
Y ++ +F M L G P+ T SV+ + A + +L GK +H +I F
Sbjct: 368 AYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFS 427
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKNEISWTVMVRGLAESGYAKESINLFE 541
+ L A+ Y K G++E +R VF+ +P ++ ++WT M+R A++G +E+I LF+
Sbjct: 428 QSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQ 487
Query: 542 EMEKTSIT-PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EM T PN +T LSVL ACSH G +++ ++F SM P + + P G HY C+VD+L R
Sbjct: 488 EMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGR 547
Query: 601 SGRLSEAED-FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
+GRL EAE + FE D W + LS C+ + + ++RA K + +L E+ AG VL
Sbjct: 548 AGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVL 607
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
LSN+YA+ GR D +R M G++K G SW+E+ N+VH F +P+
Sbjct: 608 LSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPR 660
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
F + A A L + K LH +I + + L L D + K GD +++R VF+R+
Sbjct: 10 FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
NE SW+ +++ S ++ LF+ M + T ++ A + +D +
Sbjct: 70 LPNEYSWSCIIQAYVSSSRIHDARALFDSMPGF----DAFTWNIMIAAYARINRLDDARE 125
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
F+ M ++ + +V +R RL EA MP D+ S+L G
Sbjct: 126 LFHGMISGRDVVS----WAILVAGYARHDRLEEASALFRRMPLW-DTVTCTSVLQG 176
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 249/437 (56%), Gaps = 4/437 (0%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A IF +P N W+ +I Y S PE A +F QM S P+ F+ L + S
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ G +H HVLK G+ D+FI N LI LY+ CG +D R + D ++E+DV VSW
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDV---VSW 177
Query: 389 NSMIGGYGLNGQMEEA-KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
N+++ Y G ME A + +F P +N VSW+A+I+GY +F V +F +M +G
Sbjct: 178 NALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGV 237
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ T SVL A A V +L +G+ +H I K G D F+ TAL D Y+K G IE +
Sbjct: 238 KPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALE 297
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF+ K+ +W ++ GL+ G + ++ +F EM PNE+T + VL ACS +GL
Sbjct: 298 VFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGL 357
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+D+G + FN M ++ I+P HY C+VD+L R G L EAE+ + MP + S W SLL
Sbjct: 358 LDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLL 417
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
C+ + N ++AER + L +L+ + + +V LSN+YAS GRW D M VR+ M +G+RK
Sbjct: 418 GACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRK 477
Query: 688 SGGCSWVEVRNQVHFFF 704
GCS +EV V+ F
Sbjct: 478 DPGCSMIEVDGTVYEFL 494
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 181/377 (48%), Gaps = 36/377 (9%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F R P N W I + + AL +F ++L + V P++ TF+ K+C +
Sbjct: 65 FSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGV 124
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + G + K G + + N+LI L G ++ AR + DRM +RDVVSW +L +
Sbjct: 125 EEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAY 184
Query: 261 IEMGDLGEA-RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
E G + A RR+F E P +N VSW+ MI Y+ +G E LF M KP+
Sbjct: 185 AERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTL 244
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
VLSA A + AL G VHA++ K GI D F++ AL+D+YSKCG + VF+S +
Sbjct: 245 VSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLR 304
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
KD++ +WNS+I G +G + A +F
Sbjct: 305 KDIS---TWNSIISGLSTHGSGQHA-------------------------------LQIF 330
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAK 498
+EML+ G PN+ TF VL A + L++G+++ ++ + G + + D +
Sbjct: 331 SEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGR 390
Query: 499 SGDIESSRRVFDRMPDK 515
G +E + + +MP K
Sbjct: 391 VGLLEEAEELVQKMPQK 407
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 166/390 (42%), Gaps = 74/390 (18%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
LK S + V +GR +HGH++KTG+ G DL
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGL-------------------------------GDDL 143
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE-ESMWYFERNPF 146
+ N +I+ G +E+A+ L D M ER+ VSW AL+S + + G +E S F P
Sbjct: 144 FIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPV 203
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NV+SW A I G+ G E L LF + +GVKP+ T S+ ACA + G V
Sbjct: 204 KNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWV 263
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I K G V +L+ + K G ++ A VF+ ++D+ +W I
Sbjct: 264 HAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSI---------- 313
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
I+ + G + A ++F +M FKPN F VLSA
Sbjct: 314 ---------------------ISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSAC 352
Query: 327 ASLKALRSG-----MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+ L G + VH H GI+ + ++DL + G ++ + + +K+
Sbjct: 353 SRAGLLDEGREMFNLMVHVH----GIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKE 408
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ V W S++G +G +E A+ + +
Sbjct: 409 AS--VVWESLLGACRNHGNVELAERVAQKL 436
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 147/333 (44%), Gaps = 65/333 (19%)
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HAH+LK G+ F ++ LI S+ A + +
Sbjct: 27 HAHILKSGLIHSTFAASRLI----------------ASVSTNSHAQAIPY---------- 60
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
A +F +P N W+ II Y + +F++ML + +P+K TF+ L
Sbjct: 61 -----AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFAL 115
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM------ 512
+ S + +E+G+ +HG ++K G D+F+ L YA G IE +R + DRM
Sbjct: 116 KSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVV 175
Query: 513 --------------------------PDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
P KN +SW M+ G + +G E + LFE+M+
Sbjct: 176 SWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHA 235
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ P+ T++SVL AC+H G + +G ++ ++ I +G T +VDM S+ G + +
Sbjct: 236 GVKPDNCTLVSVLSACAHVGALSQG-EWVHAYIDKNGISIDGFVATALVDMYSKCGSIEK 294
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
A + NS D + W S++SG T+ + Q A
Sbjct: 295 ALEVFNSC-LRKDISTWNSIISGLSTHGSGQHA 326
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 110/249 (44%), Gaps = 20/249 (8%)
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL-----TDTYAKSGDIESSRRVFDR 511
+L + S+ + H I+K G + F + L T+++A++ I + +F R
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQA--IPYAHSIFSR 67
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+P+ N W ++R A S + ++ +F +M S+ P++ T L +C V++G
Sbjct: 68 IPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
+ + + + ++ + + G + +A ++ M E D +W +LLS
Sbjct: 128 RQIHGHVLKT-GLGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWNALLSA-- 183
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI----YASAGRWIDAMNVRKLMTEKGLRK 687
Y + E A + ++ E P V+ N Y+ AGR+ + + + + M G+ K
Sbjct: 184 -YAERGLMELASRRVFG---ETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGV-K 238
Query: 688 SGGCSWVEV 696
C+ V V
Sbjct: 239 PDNCTLVSV 247
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 36/136 (26%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL------------IMYLGSRKSL 73
CL KDI++ N +I G + HG +G H + + L+ ++ SR L
Sbjct: 302 CLRKDISTWNSIISGLSTHG----SGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGL 357
Query: 74 --EANEIVKDLNGFDLVVH-----------NCMINANIQWGNLEEAQRLFDGMPERN-EV 119
E E+ F+L+VH CM++ + G LEEA+ L MP++ V
Sbjct: 358 LDEGREM------FNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASV 411
Query: 120 SWTALISGFMKHGRVE 135
W +L+ HG VE
Sbjct: 412 VWESLLGACRNHGNVE 427
>gi|357132191|ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Brachypodium distachyon]
Length = 656
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 313/595 (52%), Gaps = 10/595 (1%)
Query: 106 AQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
A LFD +P R+ + L++ + G ++ + P ++ +S+T + + G
Sbjct: 64 AHHLFDEIPLALRDAAAHNTLLAALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAG 123
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACA-EINDFRLGLSVFGLIFKAGFEKHVSVC 222
+ +A+ +F +L V PNEVT + + A A + LG+ V G+ + G + V V
Sbjct: 124 HAEDAMAVFRGMLAQDVPPNEVTLAGVITALARDWAPAPLGM-VHGVSVQRGLDGFVIVA 182
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
+L+ +V AR+VF+ M ++ V+W +L+ +++ G + A +F+ +PER+ V
Sbjct: 183 TNLVHAYAAAAQVGFARAVFEWMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERIPERDVV 242
Query: 283 SWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
SW VMI Y ++ EA R + M + N + A A A+ G +H
Sbjct: 243 SWLVMIDGYIRADCISEALRTYVAMMAEVDTRGNVALLVDFQKACARHAAVLEGQQLHTV 302
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+LK G + +F+ LI Y C ++ F D +H+ SWN+ + G M
Sbjct: 303 ILKDGFDTHLFVQATLIHFYGSCDLLDLAKMQFKL---SDKSHIASWNAFMAGIVRKNLM 359
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EA++LFDNMP+++ +SWS ++SGY++ D+ +F ML +G PN T +S L A
Sbjct: 360 HEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLMLGAGVKPNHITLASTLSAV 419
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEIS- 519
A+ +LE+G+ +H II L L D YAK G + + +F+ + +K + +S
Sbjct: 420 ANSGTLEQGRWIHDYIISKSIHLTDNLIAGLIDMYAKCGSVADAVLLFNHVKEKLSSLSP 479
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W M+ LA G+A S+ LF +++ ++I PN +T + VL AC H+G+V +G +F SM
Sbjct: 480 WNAMICSLAIHGHAHMSLELFSQLQSSNIKPNSITYIGVLNACCHAGMVTEGKHHFESMR 539
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y I P +HY C+VD+L R+G L EAE I +MP + D W S+L+ +++ N +
Sbjct: 540 REYGIPPTIKHYGCMVDLLGRAGYLEEAERLIKTMPVKSDVVIWGSILAAARSHGNVALG 599
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
E+A + L KL H A V L NIYA AGRW + VRK + + L + G S V
Sbjct: 600 EKAAEELAKLDPNHGASKVALCNIYADAGRWNNVSVVRKELRYENLERLSGSSGV 654
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 225/479 (46%), Gaps = 40/479 (8%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+ + L+GF +V N +++A + A+ +F+ MP++N V+W A+++G++K G ++ +
Sbjct: 171 VQRGLDGFVIVATN-LVHAYAAAAQVGFARAVFEWMPDKNTVTWNAMLNGYVKAGAIDMA 229
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAE 196
FER P ++V+SW I G+++ EAL+ ++ ++ E + N KACA
Sbjct: 230 AEMFERIPERDVVSWLVMIDGYIRADCISEALRTYVAMMAEVDTRGNVALLVDFQKACAR 289
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
G + +I K GF+ H+ V +LI +DLA+ F +K + SW
Sbjct: 290 HAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYGSCDLLDLAKMQFKLSDKSHIASWNAF 349
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + + EAR++FD MPE++ +SWS +++ Y QSG+ + A +LF M KPN
Sbjct: 350 MAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLMLGAGVKPNH 409
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ LSA+A+ L G +H +++ I + LID+Y+KCG D L+F+
Sbjct: 410 ITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTDNLIAGLIDMYAKCGSVADAVLLFNH 469
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ EK ++ + WN+MI ++G + ELF + N
Sbjct: 470 VKEK-LSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSNIK------------------- 509
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK--LGFPYDVFLGTALTD 494
PN T+ VL A + +GK H + ++ G P + + D
Sbjct: 510 ------------PNSITYIGVLNACCHAGMVTEGKH-HFESMRREYGIPPTIKHYGCMVD 556
Query: 495 TYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
++G +E + R+ MP K+++ W ++ G EE+ K + PN
Sbjct: 557 LLGRAGYLEEAERLIKTMPVKSDVVIWGSILAAARSHGNVALGEKAAEELAK--LDPNH 613
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 165/375 (44%), Gaps = 47/375 (12%)
Query: 78 IVKDLNGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
I+KD GFD L V +I+ L+ A+ F + + SW A ++G ++ +
Sbjct: 303 ILKD--GFDTHLFVQATLIHFYGSCDLLDLAKMQFKLSDKSHIASWNAFMAGIVRKNLMH 360
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
E+ F+ P ++ ISW+ + G+VQ+G S AL+LF +L +GVKPN +T +S A A
Sbjct: 361 EARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLMLGAGVKPNHITLASTLSAVA 420
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
G + I K + + ++LI
Sbjct: 421 NSGTLEQGRWIHDYI----ISKSIHLTDNLI---------------------------AG 449
Query: 256 ILDVFIEMGDLGEARRIFDEMPER--NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
++D++ + G + +A +F+ + E+ + W+ MI G+ + LF Q+ + K
Sbjct: 450 LIDMYAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSNIK 509
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDG- 370
PN+ + VL+A + G H H ++ GI + ++DL + G ++
Sbjct: 510 PNSITYIGVLNACCHAGMVTEGKH-HFESMRREYGIPPTIKHYGCMVDLLGRAGYLEEAE 568
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM---EEAKELFDNMPKRNDVSWSAIISGYL 427
RL+ V+ D VV W S++ +G + E+A E + + S A+ + Y
Sbjct: 569 RLIKTMPVKSD---VVIWGSILAAARSHGNVALGEKAAEELAKLDPNHGASKVALCNIYA 625
Query: 428 EHKQFDLVFAVFNEM 442
+ +++ V V E+
Sbjct: 626 DAGRWNNVSVVRKEL 640
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 267/466 (57%), Gaps = 35/466 (7%)
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ D+V +L+++ + G L EAR++F++MP+R+ V+W+ +I+ Y+Q P +A F Q
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R+ + PN S V+ A A+ + G +H +K G + +V + +AL+DLY++
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR--- 208
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
YGL M++A+ +FD + RNDVSW+A+I+G+
Sbjct: 209 ----------------------------YGL---MDDAQLVFDALESRNDVSWNALIAGH 237
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+ +F ML G P+ +++S+ A +S LE+GK +H +IK G
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F G L D YAKSG I +R++FDR+ ++ +SW ++ A+ G+ KE++ FEEM +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PNE++ LSVL ACSHSGL+D+G Y+ M+ I P HY VVD+L R+G L+
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A FI MP EP + W +LL+ C+ +KN ++ A +++++L + P +V+L NIYAS
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
GRW DA VRK M E G++K CSWVE+ N +H F + +P+
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQ 522
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 201/445 (45%), Gaps = 66/445 (14%)
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
S LE + I D ++ ++ C + + G + A + + + V L++ +
Sbjct: 47 SSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTLLNMY 105
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
K G +EE+ FE+ P ++ ++WT I G+ Q+ +AL F ++L G PNE T S
Sbjct: 106 AKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLS 165
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
S+ KA A G + G K GF+ +V V ++L+ L + G +D A+ VFD +E R
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
N+VSW+ +IA + + E+A LF+ M
Sbjct: 226 -------------------------------NDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
R F+P+ ++ + A +S L G VHA+++K G + F N L+D+Y+K G
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
D R +FD + ++D VVSWNS++ Y +G +EA V W
Sbjct: 315 DARKIFDRLAKRD---VVSWNSLLTAYAQHGFGKEA------------VWW--------- 350
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
F EM G PN+ +F SVL A + L++G + + K G + +
Sbjct: 351 ----------FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 489 GTALTDTYAKSGDIESSRRVFDRMP 513
+ D ++GD+ + R + MP
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMP 425
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE-KGKDLHGKIIKLGFPYDVFLGTA 491
DL+ + L IP F + L +V L +G+ +H I++ F +D+ +G
Sbjct: 41 DLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNT 100
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L + YAK G +E +R+VF++MP ++ ++WT ++ G ++ +++ F +M + +PN
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 552 ELTILSVLFACS--HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
E T+ SV+ A + G L F N + ++D+ +R G + +A+
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVK---CGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 610 FINSMPFEPDSNAWASLLSG 629
+++ D +W +L++G
Sbjct: 218 VFDALESRNDV-SWNALIAG 236
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 130/324 (40%), Gaps = 47/324 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG +K G ++ + LL +Y +A + L + V N +I + +
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALI-----SGFMKHGR----------------- 133
E+A LF GM + S+ +L +GF++ G+
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 134 -------------VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+ ++ F+R ++V+SW + + + Q+GF EA+ F ++ G+
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+PNE++F S+ AC+ G + L+ K G +++ L + G+++ A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 241 VFDRMEKRDVVS-WTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ M + W +L+ E+G A +F+ P+ + ++ Y
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYA-AEHVFELDPD-DPGPHVILYNIYASG 477
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSC 318
G +A R+ ++M K +C
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPAC 501
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 291/569 (51%), Gaps = 80/569 (14%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
N N++SW+A I GF QNG+ EAL+L ++ +G +PN T +S+ ACA + + LG
Sbjct: 6 NSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLG 65
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + + GF + V N L+ DV+
Sbjct: 66 KEIHGYVTRHGFMSNPFVVNGLV-------------------------------DVYRRC 94
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
D+G A +IF +N VS++ MI Y ++G E+A LF QM
Sbjct: 95 ADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMEL-------------- 140
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS----KCGETKDGRLVFDSIVE 379
+ KD N++I Y+ KC + K +L FD + E
Sbjct: 141 -----------------------VGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTE 177
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLV 435
+D A +WN +I GY Q+E + L M + N +W+ IISG++E+ +L
Sbjct: 178 RDTA---TWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELA 234
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F EM S P+ T +L A A +A++ +GK +H I+ G+ DV +G AL D
Sbjct: 235 LRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDM 294
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
YAK G I+ + +V++R+ + N +S M+ A G+ E I LF M P+ +T
Sbjct: 295 YAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTF 354
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
LSVL +C H+G V+ G ++F+ M YN+ P+ +HYTC+VD+LSR+GRL EA + + +P
Sbjct: 355 LSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIP 413
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
+PDS W +LL GC + N ++ E A ++L +L + YVLL+N+YA AGRW D
Sbjct: 414 RKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDR 473
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
R+++ ++G+ KS GCSW+E R +H F
Sbjct: 474 TRQMIKDRGMHKSPGCSWIEDREDIHVFL 502
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 169/346 (48%), Gaps = 45/346 (13%)
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
E + N VSWS +I + Q+GY +EA L +M F+PN + VL A A L+ L
Sbjct: 5 ENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNL 64
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +H +V + G + F+ N L+D+Y +C + +F V +VVS+N+MI G
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGF---SVKNVVSYNTMIVG 121
Query: 395 YGLNGQMEEAKELFDNMP--KRNDVSWSAIISGYLEH--KQFDLVFAVFNEMLLSGEIP- 449
Y NG +E+AKELFD M ++ +SW+++ISGY ++ K DL A ++ G
Sbjct: 122 YCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAA---QLAFDGVTER 178
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ +T++ ++ A LE ++L K+ GF +V+
Sbjct: 179 DTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVY---------------------- 216
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+W ++ G E+G+ + ++ LF EM+ +S+ P+ T+ +L AC+ +
Sbjct: 217 ---------TWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIA 267
Query: 570 KGLK-YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+G + + +S+ Y + + +VDM ++ G + A N +
Sbjct: 268 RGKQVHAHSIRQGYELDVHIG--AALVDMYAKCGSIKHAMQVYNRI 311
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 81/413 (19%)
Query: 34 QNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF---DLVVH 90
QNL + G+ +HG++ + G ++ L+ +Y R+ + +K +GF ++V +
Sbjct: 60 QNLNL-GKEIHGYVTRHGFMSNPFVVNGLVDVY---RRCADMGSALKIFSGFSVKNVVSY 115
Query: 91 NCMINANIQWGNLEEAQRL-------------------------------------FDGM 113
N MI + GN+E+A+ L FDG+
Sbjct: 116 NTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGV 175
Query: 114 PERNEVSWTALISGFMKHGRVEESMWYFER---NPFQ-NVISWTAAICGFVQNGFSFEAL 169
ER+ +W LISG+ ++E ++ + F+ NV +W I G V+NG + AL
Sbjct: 176 TERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELAL 235
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
+LF ++ S ++P+ T I ACA + G V + G+E V + +L+ +
Sbjct: 236 RLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMY 295
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
K G + A V++R+ ++ VS + M+
Sbjct: 296 AKCGSIKHAMQVYNRISNPNL-------------------------------VSQNAMLT 324
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y G+ +E LFR M F+P+ F VLS+ A+ +G + +
Sbjct: 325 AYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTP 384
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+ ++DL S+ G + + I K + V W +++GG + G +E
Sbjct: 385 SLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDS--VMWGALLGGCVIWGNVE 435
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 11/204 (5%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF+ +S I T +L + +G+ +H H I+ G + ++ L+ MY
Sbjct: 237 LFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYA 296
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTA 123
A ++ ++ +LV N M+ A G+ +E LF M + V++ +
Sbjct: 297 KCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLS 356
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVIS----WTAAICGFVQNGFSFEALKLFLKLLESG 179
++S + G VE +F+ + NV +T + + G EA +L K+
Sbjct: 357 VLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPR-- 414
Query: 180 VKPNEVTFSSICKACAEINDFRLG 203
KP+ V + ++ C + LG
Sbjct: 415 -KPDSVMWGALLGGCVIWGNVELG 437
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 322/591 (54%), Gaps = 21/591 (3%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE-ALKLFLKLLESGVKP 182
L++ ++K ++ + F+ +N +WT I GF + S E LF ++ G P
Sbjct: 73 LLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACP 132
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N+ T SS+ K C+ N+ + G + I + G V + NS++ L LK E + A S F
Sbjct: 133 NQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFF 192
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ M ++DVVSW +++ ++ GD+ ++ +F P ++ VSW+ +I Q GY A
Sbjct: 193 ELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALE 252
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
M + + + FSI L ++SL + G +H VL G+ D +I ++L+++Y
Sbjct: 253 QLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYG 312
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSM-IGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG R+ S + KDV N + G +G+ KE PK VSWS+
Sbjct: 313 KCG-----RMDKASTILKDVP----LNFLRKGNFGVT-----CKE-----PKARMVSWSS 353
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
++SGY+ + +++ F M+ + + T ++++ A A+ LE GK +H I K+G
Sbjct: 354 MVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIG 413
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D ++G++L D Y+KSG ++ + +F+++ + N + WT M+ G A G KE+I+LFE
Sbjct: 414 LRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFE 473
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M I PNE+T + VL ACSH GL+++G +YF M+ Y+I P HYT +V++ R+
Sbjct: 474 GMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRA 533
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L EA++FI ++ W S LS C+ +KN + + + L + A P Y+LLS
Sbjct: 534 GHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLS 593
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+ +S +W +A VR LM ++G++K G SWV++++Q+H F +P+
Sbjct: 594 NMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQ 644
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 49/393 (12%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+++ G D+V+ N +++ ++ E A+ F+ M E++ VSW +I +++ G VE+S
Sbjct: 160 ILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKS 219
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+ F P ++V+SW I G +Q G+ AL+ ++ G + + VTFS + +
Sbjct: 220 LEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSL 279
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+ +G + G + G + +SL+ + K G RM+K + V L
Sbjct: 280 SLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCG----------RMDKASTILKDVPL 329
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ F+ G+ G + + P+ VSWS M++ Y +G E+ + FR M +
Sbjct: 330 N-FLRKGNFG----VTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR 384
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ ++SA A+ L G +HA++ KIG+ D ++ ++LID+YSK G D ++F+ I
Sbjct: 385 TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQI 444
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
E + VV W SMI G L+GQ +EA LF+
Sbjct: 445 KEPN---VVLWTSMISGCALHGQGKEAISLFEG--------------------------- 474
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
ML G IPN+ TF VL A + V +E+G
Sbjct: 475 ----MLNLGIIPNEVTFVGVLNACSHVGLIEEG 503
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 48/290 (16%)
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK-QFDLVFAVFNEMLLS 445
S N ++ Y + ++ A +LFD + +N +W+ +ISG+ +LVF++F EM
Sbjct: 69 SANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQAD 128
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK------- 498
G PN+ T SSVL + +++ GK +H I++ G DV L ++ D Y K
Sbjct: 129 GACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYA 188
Query: 499 ------------------------SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
GD+E S +F P+K+ +SW ++ GL + GY +
Sbjct: 189 ESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYER 248
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
++ M + +T L S LV+ G + + + + +G + +
Sbjct: 249 LALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVG-RQLHGRVLTFGLNSDGYIRSSL 307
Query: 595 VDMLSRSGRLSEAEDFINSMPF-------------EPDSN--AWASLLSG 629
V+M + GR+ +A + +P EP + +W+S++SG
Sbjct: 308 VEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSG 357
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 51/295 (17%)
Query: 31 ITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVH 90
++S +LV GR LHG ++ G++ + Y+ + L+ MY + +A+ I+KD V
Sbjct: 276 VSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKD------VPL 329
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N + N E R+ VSW++++SG++ +G+ E+ M F
Sbjct: 330 NFLRKGNFGVTCKEPKARM---------VSWSSMVSGYVWNGKYEDGMKTFR-------- 372
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+ +C +L+ ++ T ++I ACA G + I
Sbjct: 373 ---SMVC----------------ELIVVDIR----TVATIISACANAGILEFGKQIHAYI 409
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K G V +SLI + K G +D A +F+++++ +VV WT ++ G EA
Sbjct: 410 QKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAI 469
Query: 271 RIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFS 320
+F+ M NEV++ ++ + G EE R FR M Y P ++
Sbjct: 470 SLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYT 524
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
S L ++ S+ S + LHG K G + L Y KS +++ + ++FD + K
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96
Query: 516 NEISWTVMVRGLAESGYAKESI-NLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
N +WT+++ G A + + E + +LF EM+ PN+ T+ SVL CS + G
Sbjct: 97 NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFG 153
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 342/629 (54%), Gaps = 35/629 (5%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
DL N I+ I+ G + EA+ LFD MP+RN V+W ++I+G+++ + ++ F+
Sbjct: 65 LDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEM 124
Query: 145 PFQNVISWTAAICGFV--QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
P ++V+SW I G+V Q + E LF ++ E V+++++
Sbjct: 125 PDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDC----VSWNTMISGYTRSGRMDE 180
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
L +F + E++V N+++T L+ G+V+ A F RM +RD S + ++ I+
Sbjct: 181 ALQ----LFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQ 236
Query: 263 MGDLGEARRIFDEMPERNEV------SWSVMIARYNQSGYPEEAFRLFRQMTRYS----- 311
G+L EA+RI +++ ++++++A Y Q+G ++A +LF Q+ Y
Sbjct: 237 NGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKD 296
Query: 312 ---FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGET 367
F+ N ++ ++ + + S A VL + E+D N +I Y + +
Sbjct: 297 GGRFERNVVSWNSMIMCYVKARDIFS-----ARVLFDQMKERDTISWNTMISGYVRMSDM 351
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
++ ++F + D ++WNSMI G+ G +E A+ LF +P++N VSW+++I+GY
Sbjct: 352 EEAWMLFQEMPNPDT---LTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYE 408
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+ + ++ +MLL GE P++ T SSVL + A+L G +H +I K P D+
Sbjct: 409 NNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIP-DIP 467
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ +L Y++ G I +R +FD + + E ISW M+ G A G+A +++ LFE M++
Sbjct: 468 INNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRL 527
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ P +T +SVL AC+H+G V +G +F SM + I+P H+ +VD++ R G+L E
Sbjct: 528 KVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEE 587
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A D INSMPFEPD W +LL C+ + N ++A A + L KL E A YVLL N+YA
Sbjct: 588 AMDLINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYAD 647
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
G+W +A +R +M +RK G SWV+
Sbjct: 648 VGQWDNATEMRMMMERNNIRKQPGYSWVD 676
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 243/511 (47%), Gaps = 67/511 (13%)
Query: 29 KDITSQNLVIQGR-ALHGHLIKTGIHKERYLTTR-------LLIMYLGSRKSLEANEIVK 80
+D+ S NL+I G + G ++ G H + R ++ Y S + EA ++
Sbjct: 127 RDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFD 186
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
+ ++V N M+ +Q G++E A F MPER+ S +AL++G +++G ++E+
Sbjct: 187 SMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRI 246
Query: 141 FERNPFQN------VISWTAAICGFVQNGFSFEALKLF--LKLLESGVKP------NEVT 186
+ Q+ V ++ + G+ QNG +A +LF + + G K N V+
Sbjct: 247 LLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVS 306
Query: 187 FSSICKACAEINDFRLGLSVFG--LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
++S+ + D +F ++F E+ N++I+ ++M +++ A +F
Sbjct: 307 WNSMIMCYVKARD------IFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQE 360
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M D ++W ++ F + G+L AR +F +P++N VSW+ MIA Y +G + A L+
Sbjct: 361 MPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELY 420
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
RQM KP+ S VLS + AL GM +H + K I D+ I+N+LI +YS+C
Sbjct: 421 RQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVI-PDIPINNSLITMYSRC 479
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G + R +FD + K V+SWN+MIGGY +G +A ELF+ M KR V
Sbjct: 480 GAIVEARTIFDEV--KLQKEVISWNAMIGGYAFHGFAADALELFELM-KRLKVR------ 530
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
P TF SVL A A +++G+ +H K + F
Sbjct: 531 ------------------------PTYITFISVLNACAHAGFVKEGR-MHFKSMACEFGI 565
Query: 485 DVFLG--TALTDTYAKSGDIESSRRVFDRMP 513
+ + +L D + G +E + + + MP
Sbjct: 566 EPRIEHFASLVDIVGRHGQLEEAMDLINSMP 596
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 164/347 (47%), Gaps = 38/347 (10%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
+++ Y+ +R A + + D + N MI+ ++ ++EEA LF MP + ++W
Sbjct: 310 MIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTW 369
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
++ISGF + G +E + F P +N++SW + I G+ NG A +L+ ++L G K
Sbjct: 370 NSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEK 429
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ T SS+ C+ LG+ + I K + + NSLIT+ + G + AR++
Sbjct: 430 PDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPD-IPINNSLITMYSRCGAIVEARTI 488
Query: 242 FDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
FD ++ +++V+S W+ MI Y G+ +A
Sbjct: 489 FDEVKLQKEVIS-------------------------------WNAMIGGYAFHGFAADA 517
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALID 359
LF M R +P F VL+A A ++ G MH + + GIE + +L+D
Sbjct: 518 LELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVD 577
Query: 360 LYSKCGETKDGRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
+ + G+ ++ + +S+ E D A W +++G ++ +E A+
Sbjct: 578 IVGRHGQLEEAMDLINSMPFEPDKA---VWGALLGACRVHNNVELAR 621
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 330/627 (52%), Gaps = 45/627 (7%)
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
C ++ G AQ + G+ ++N + + L++ + + ++ + E + + +
Sbjct: 91 CTHFKSLSQGKQLHAQVISLGL-DQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLH 149
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W I +V+NGF EAL ++ +L ++P+E T+ S+ KAC E DF GL V I
Sbjct: 150 WNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIE 209
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ E + V N+L+++ + G++++AR +FD M +RD VSW I+ + G EA +
Sbjct: 210 ASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQ 269
Query: 272 IFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+F M E N + W+ + SG A +L QM R S + + L+A +
Sbjct: 270 LFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQM-RTSIHLDAIAMVVGLNACS 328
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVF--ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ A++ G +H H ++ DVF + NALI +YS+C +D+ H
Sbjct: 329 HIGAIKLGKEIHGHAVRTCF--DVFDNVKNALITMYSRC---------------RDLGH- 370
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
A LF ++ ++W+A++SGY +++ V +F EML
Sbjct: 371 ------------------AFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQE 412
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIES 504
G PN T +SVL A +A+L+ GK+ H I+K F + L AL D Y++SG +
Sbjct: 413 GMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLE 472
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R+VFD + ++E+++T M+ G G + ++ LFEEM K I P+ +T+++VL ACSH
Sbjct: 473 ARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSH 532
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +G F M ++ I P HY C+ D+ R+G L++A++FI MP++P S WA
Sbjct: 533 SGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWA 592
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL C+ + N ++ E A L ++ +H YVL++N+YA+AG W VR M G
Sbjct: 593 TLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRTYMRNLG 652
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+RK+ GC+WV+V ++ F NP
Sbjct: 653 VRKAPGCAWVDVGSEFSPFLVGDSSNP 679
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 194/437 (44%), Gaps = 72/437 (16%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF--- 141
+ L VHN +++ ++G LE A+ LFD MP R+ VSW +IS + G +E+ F
Sbjct: 215 WSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSM 274
Query: 142 -ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
E NVI W G + +G AL+L + + + + + + AC+ I
Sbjct: 275 QEEGVEMNVIIWNTIAGGCLHSGNFRGALQL-ISQMRTSIHLDAIAMVVGLNACSHIGAI 333
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+LG + G + F+ +V N+LIT+ + ++ A +F R E++ +++W +L +
Sbjct: 334 KLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGY 393
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
M RY EE LFR+M + +PN +
Sbjct: 394 AHMD-------------------------RY------EEVTFLFREMLQEGMEPNYVTIA 422
Query: 321 IVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
VL A + L+ G H +++K E+ + + NAL+D+YS+ G + R VFDS+ +
Sbjct: 423 SVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTK 482
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+D V++ SMI GYG+ G+ E +LF+ M K LE K
Sbjct: 483 RD---EVTYTSMILGYGMKGEGETTLKLFEEMCK-------------LEIK--------- 517
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAK 498
P+ T +VL A + + +G+ L ++I + G + + D + +
Sbjct: 518 ---------PDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGR 568
Query: 499 SGDIESSRRVFDRMPDK 515
+G + ++ MP K
Sbjct: 569 AGLLNKAKEFITGMPYK 585
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 5/212 (2%)
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
S+L A SL +GK LH ++I LG + L + L + Y + ++ V +
Sbjct: 86 SLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTL 145
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ + W +++ +G+ E++ +++ M I P+E T SVL AC S + GL+
Sbjct: 146 DPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVH 205
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
S+E +++ + + +V M R G+L A ++MP DS +W +++S Y +
Sbjct: 206 RSIEA-SSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMP-RRDSVSWNTIIS---CYAS 260
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
I + A + + EE V++ N A
Sbjct: 261 RGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGG 292
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 299/573 (52%), Gaps = 36/573 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEIND 199
F + P N+ W I G+ + ++ +FL +L S + PN+ TF + KA + +
Sbjct: 129 FNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKV 188
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG + G++ KA + + NSLI G DLA
Sbjct: 189 LHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAH-------------------- 228
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
R+F MP ++ VSW+ MI + G P++A LF++M KPN
Sbjct: 229 -----------RVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITM 277
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
VLSA A L G + +++ G + + ++NA++D+Y KCG D + +F+ + E
Sbjct: 278 VSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSE 337
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
KD+ VSW +M+ G+ G +EA +FD MP + +W+A+IS Y ++ + + ++F
Sbjct: 338 KDI---VSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLF 394
Query: 440 NEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+EM LS + P++ T LCASA + +++ G +H I K + L T+L D YAK
Sbjct: 395 HEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAK 454
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G++ + VF + K+ W+ M+ LA G K +++LF M + I PN +T ++
Sbjct: 455 CGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNI 514
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L AC+H+GLV++G + F MEP+Y I P +HY CVVD+ R+G L +A FI MP P
Sbjct: 515 LCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPP 574
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
+ W +LL C + N ++AE A +NL +L + +VLLSNIYA AG W N+RK
Sbjct: 575 TAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRK 634
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LM + ++K CS ++V VH F + +P
Sbjct: 635 LMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHP 667
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 214/457 (46%), Gaps = 70/457 (15%)
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
+RL +++LGS + ++K DL + N +IN G + A R+F MP ++
Sbjct: 183 ASRLKVLHLGS---VLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDV 239
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
VSW A+I+ F G +AL LF ++
Sbjct: 240 VSWNAMIN-------------------------------AFALGGLPDKALLLFQEMEMK 268
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
VKPN +T S+ ACA+ D G + I GF +H+ + N+++ + +K G ++ A
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDA 328
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+ +F++M ++D+VSWT +LD ++G+ EA IFD MP + +W+ +I+ Y Q+G P
Sbjct: 329 KDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPR 388
Query: 299 EAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
A LF +M KP+ L A A L A+ G +H ++ K I + ++ +L
Sbjct: 389 VALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSL 448
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+Y+KCG VF ++ KD V W++MIG + GQ + A +LF
Sbjct: 449 LDMYAKCGNLNKAMEVFHAVERKD---VYVWSAMIGALAMYGQGKAALDLF--------- 496
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
S+++ Y++ PN TF+++LCA + +G+ L ++
Sbjct: 497 --SSMLEAYIK--------------------PNAVTFTNILCACNHAGLVNEGEQLFEQM 534
Query: 478 IKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
L G + + D + ++G +E + ++MP
Sbjct: 535 EPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMP 571
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 121/232 (52%), Gaps = 13/232 (5%)
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASA 462
AK +F+ +P+ N W+ +I GY F +F ML S E PNK TF + A++
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
+ L G LHG +IK D+F+ +L + Y SG + + RVF MP K+ +SW
Sbjct: 185 RLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNA 244
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M+ A G +++ LF+EME + PN +T++SVL AC+ ++ G ++ S
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFG-RWICSY---- 299
Query: 583 NIKPNG--RHY---TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
I+ NG H ++DM + G +++A+D N M E D +W ++L G
Sbjct: 300 -IENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMS-EKDIVSWTTMLDG 349
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 146/312 (46%), Gaps = 25/312 (8%)
Query: 83 NGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NGF L+++N M++ ++ G + +A+ LF+ M E++ VSWT ++ G K G +E+
Sbjct: 303 NGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCI 362
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEIND 199
F+ P + +W A I + QNG AL LF ++ L KP+EVT IC CA
Sbjct: 363 FDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTL--ICALCASA-- 418
Query: 200 FRLGLSVFGLIFKAGFEKH-----VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+LG FG +KH + SL+ + K G ++ A VF +E++DV W+
Sbjct: 419 -QLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWS 477
Query: 255 VILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TR 309
++ G A +F M E N V+++ ++ N +G E +LF QM
Sbjct: 478 AMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPL 537
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGM--HVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
Y P + V+ R+G+ + + K+ I + AL+ S+ G
Sbjct: 538 YGIVPQIQHYVCVVDIFG-----RAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNV 592
Query: 368 KDGRLVFDSIVE 379
+ L + +++E
Sbjct: 593 ELAELAYQNLLE 604
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 209/617 (33%), Positives = 328/617 (53%), Gaps = 55/617 (8%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE-ANEIVKDLN 83
LC + I++ +L IQ HL + TR I LG +E A + ++
Sbjct: 18 LCTFRCISTLSLPIQ-ETPQTHLFQC--------NTR--IQELGRLGRVEEARRVFNEMI 66
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
D+V N MIN Q G ++EA+ LFD +N +WT L++G+ K GR+EE+ FE
Sbjct: 67 QRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFES 126
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+NV+SW A I G+VQNG A KLF ++ E V + C C +++ R
Sbjct: 127 MTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCH-CYRMSEARE- 184
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIE 262
+F E++ +I+ + + + A VF +M R+ SWT ++ F +
Sbjct: 185 ------LFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTRNEYSWTTMIAAFAQ 238
Query: 263 MGDLGEARRIFDEMPER-NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
G L +A ++++ +PE+ N SW+ MIA + Q+ EA L ++ R P+ S F+
Sbjct: 239 CGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTS 298
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
LSA A++ + G +H+ +K G + + ++ N LI +Y+KCG +DG VF +I
Sbjct: 299 ALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTI---- 354
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
MPKR+ VSW+AIIS Y++ ++ +F +
Sbjct: 355 ----------------------------RMPKRDVVSWTAIISAYVQAGHGEVALDLFLD 386
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
ML G PN+ T +S+L A ++ +++ G+ H I KLGF +F+G +L Y K G
Sbjct: 387 MLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG- 445
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
E VF+ MP+ + I+W ++ G A++G KE+I +FE+ME I P++++ L VL A
Sbjct: 446 YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCA 505
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH+GLVD+G +FNSM Y I P HYTC+VD+L R+G LSEAE I +MP +PDS
Sbjct: 506 CSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSV 565
Query: 622 AWASLLSGCKTYKNEQI 638
W +LL C+ ++N ++
Sbjct: 566 IWEALLGACRIHRNNEL 582
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 164/431 (38%), Gaps = 139/431 (32%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
S+ ++SF S + C +I + GR +H IKTG Y+ L+ MY
Sbjct: 289 SVPSDSSFTSALSAC----ANIGDVEI---GRVIHSLAIKTGCQFNSYVMNGLISMY--- 338
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG--MPERNEVSWTALISG 127
+ GN+E+ +F MP+R+ VSWTA+IS
Sbjct: 339 ----------------------------AKCGNVEDGSHVFRTIRMPKRDVVSWTAIIS- 369
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+VQ G AL LFL +L G+KPN++T
Sbjct: 370 ------------------------------AYVQAGHGEVALDLFLDMLARGIKPNQLTV 399
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+S+ AC + +LG LIFK GF+ + V NSLIT+ K G D VF+ M +
Sbjct: 400 TSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFCVFEEMPE 458
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
D+++W +L +G A Q+G +EA ++F QM
Sbjct: 459 HDLITWNAVL--------VGCA-----------------------QNGLGKEAIKIFEQM 487
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
P+ F VL A + + G H ++ K GI V+ ++DL
Sbjct: 488 EVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDL------ 541
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISG 425
G G + EA+ L +NMP + D V W A++
Sbjct: 542 ----------------------------LGRAGYLSEAEALIENMPVKPDSVIWEALLGA 573
Query: 426 YLEHKQFDLVF 436
H+ +L++
Sbjct: 574 CRIHRNNELLY 584
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 190/565 (33%), Positives = 294/565 (52%), Gaps = 55/565 (9%)
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLES----GVKPNEVTFSSICKACAEINDFRLGLSV 206
SW I G A+ LFL++ S + K+CA + LG S+
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
L ++G N+L+ L K+ S M+ VV L
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKL---PAPPSHSPEMDGSAVV--------------L 123
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
R++FDEMPE++ VSW+ ++ +SG EA L R+M R KP++ S VL
Sbjct: 124 ESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIF 183
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A +R GM +H + G DVF+ ++LID+Y+ C T
Sbjct: 184 AEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRT------------------- 224
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+ + ++FDN+P R+ + W+++++G ++ D +F ML SG
Sbjct: 225 ---------------DYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSG 269
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P TFSS++ A ++ASL GK LH +I+ GF +VF+ ++L D Y K G++ +R
Sbjct: 270 IKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIAR 329
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
R+FDR+ + +SWT M+ G A G A+E++ LF+ ME ++ PN +T L+VL ACSH+G
Sbjct: 330 RIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAG 389
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LVDKG KYFNSM Y I P+ H+ + D L R G+L EA +FI+ M +P ++ W++L
Sbjct: 390 LVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTL 449
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L CK +KN +AE K ++ L +++LSN Y+S+GRW +A ++RK M +KG++
Sbjct: 450 LRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQ 509
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNP 711
K CSW+EV+N+ H F +P
Sbjct: 510 KEPACSWIEVKNKQHVFVAHDKSHP 534
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 206/517 (39%), Gaps = 115/517 (22%)
Query: 12 NPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRK 71
+P + +S + + LK + L G +LH +++G +R+ LL +Y K
Sbjct: 49 DPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYC---K 105
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
+++G +V LE +++FD MPE++
Sbjct: 106 LPAPPSHSPEMDGSAVV--------------LESVRKVFDEMPEKD-------------- 137
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
V+SW + G ++G EAL L ++ G KP+ T SS+
Sbjct: 138 -----------------VVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVL 180
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
AE D R G+ + G + GF V V +SLI + D + VFD + RD +
Sbjct: 181 PIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAI 240
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
W + M+A Q+G +EA LFR+M
Sbjct: 241 LW-------------------------------NSMLAGCAQNGSVDEALGLFRRMLHSG 269
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
KP FS ++ A +L +L G +HA+V++ G + +VFIS++LID+Y KCG R
Sbjct: 270 IKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIAR 329
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+FD I D +VSW +MI G+ L+G EA LFD M
Sbjct: 330 RIFDRIQSPD---IVSWTAMIMGHALHGPAREALVLFDRME------------------- 367
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDVFLGT 490
L PN TF +VL A + ++KG K + G +
Sbjct: 368 ------------LGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHA 415
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRG 526
AL DT + G +E + M K S W+ ++R
Sbjct: 416 ALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRA 452
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 89/321 (27%)
Query: 11 INP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
I P +F+S I C L ++ G+ LH ++I+ G ++++ L+ MY
Sbjct: 270 IKPMPVTFSSLIPACGNLAS-------LLLGKQLHAYVIRGGFDGNVFISSSLIDMY--- 319
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+ GN+ A+R+FD + + VSWTA+I G
Sbjct: 320 ----------------------------CKCGNVSIARRIFDRIQSPDIVSWTAMIMGHA 351
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
HG E++ F+R N +KPN +TF +
Sbjct: 352 LHGPAREALVLFDRMELGN-------------------------------LKPNHITFLA 380
Query: 190 ICKACAEINDFRLGLSVF-------GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ AC+ G F G++ E H ++ ++L + G+++ A +
Sbjct: 381 VLTACSHAGLVDKGWKYFNSMSDHYGIV--PSLEHHAALADTL----GRPGKLEEAYNFI 434
Query: 243 DRMEKRDVVS-WTVILDVFIEMGD--LGE--ARRIFDEMPERNEVSWSVMIARYNQSGYP 297
M+ + S W+ +L + L E A++IFD P R+ S ++ Y+ SG
Sbjct: 435 SGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEP-RSMGSHIILSNTYSSSGRW 493
Query: 298 EEAFRLFRQMTRYSFKPNTSC 318
EA L + M + + +C
Sbjct: 494 NEAAHLRKSMRKKGMQKEPAC 514
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/630 (30%), Positives = 326/630 (51%), Gaps = 74/630 (11%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
R V + A I F Q G A++L +S ++ T+ S+ + CA + F
Sbjct: 60 RTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTD 117
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V +I ++ L++ G++ R VFD MEK++V W ++ + +
Sbjct: 118 GKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177
Query: 263 MGDLGE--------------------ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+GD E A +FD++ +R+ +SW+ MI+ Y +G E
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+++QM + + VL A+ L G VH+ +K E+ + SN L+D+YS
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYS 297
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR-------- 414
KCG+ VF+ + E++V VSW SMI GY +G+ + A +L M K
Sbjct: 298 KCGDLDGALRVFEKMGERNV---VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354
Query: 415 -------------------------------NDVSWSAIISGYLEHKQFDLVFAVFNEML 443
N +A++ Y + + +VF+ M+
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 444 LS---------GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+ GE+ P+ T + VL A AS+++LE+GK++HG I++ G+ D + AL
Sbjct: 415 VKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D Y K G + +R +FD +P K+ +SWTVM+ G GY E+I F EM I P+E+
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
+ +S+L+ACSHSGL+++G ++F M+ +NI+P HY C+VD+LSR+G LS+A +F+ +
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMET 594
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
+P PD+ W +LL GC+ Y + ++AE+ + +++L E+ YVLL+NIYA A +W +
Sbjct: 595 LPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEV 654
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+R+ + ++GLRK+ GCSW+E++ +V+ F
Sbjct: 655 KRLREKIGKQGLRKNPGCSWIEIKGKVNLF 684
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 210/484 (43%), Gaps = 106/484 (21%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE---------RNP------ 145
G+L+E +R+FD M ++N W ++S + K G +ES+ F+ + P
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFEL 207
Query: 146 -----FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
++VISW + I G+V NG + L ++ +++ G+ + T S+ CA
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG +V L K+ FE+ ++ N+L+ + K G++D A VF++M +R+VVSWT ++ +
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 261 IEMGDLGEARRIFDEMP---------------------------------------ERNE 281
G A ++ +M E N
Sbjct: 328 TRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNL 387
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYS----------FKPNTSCFSIVLSALASLKA 331
+ ++ Y + G E A +F M KP++ + VL A ASL A
Sbjct: 388 FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSA 447
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G +H ++L+ G D ++NAL+DLY KCG RL+FD I KD +VSW M
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD---LVSWTVM 504
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GYG++G EA A FNEM +G P++
Sbjct: 505 IAGYGMHGYGNEA-------------------------------IATFNEMRDAGIEPDE 533
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESSRRVF 509
+F S+L A + LE+G I+K F + L + D +++G++ +
Sbjct: 534 VSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFM 592
Query: 510 DRMP 513
+ +P
Sbjct: 593 ETLP 596
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 128/543 (23%), Positives = 212/543 (39%), Gaps = 150/543 (27%)
Query: 13 PETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLG---- 68
PE++F + + C +D+ S N +I G +G ER L +MYLG
Sbjct: 201 PESAFELFDKLCD---RDVISWNSMISGYVSNGL-------TERGLGIYKQMMYLGIDVD 250
Query: 69 ------------SRKSLEANEIVKDL---NGFDLVVH--NCMINANIQWGNLEEAQRLFD 111
+ +L + V L + F+ ++ N +++ + G+L+ A R+F+
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
M ERN VSWT++I+G+ + GR S A+KL
Sbjct: 311 KMGERNVVSWTSMIAGYTRDGR-------------------------------SDGAIKL 339
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
++ + GVK + V +SI ACA G V I E ++ VCN+L+ + K
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVIL---------------------------------- 257
G ++ A SVF M +D++SW ++
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 258 ---------------DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D++++ G LG AR +FD +P ++ VSW+VMIA Y GY EA
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIA 519
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F +M +P+ F +L A + H+ +L+ G + N
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACS-----------HSGLLEQGWRFFYIMKN------- 561
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSA 421
D +E + H + M+ G + +A E + +P D + W A
Sbjct: 562 ------------DFNIEPKLEH---YACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGA 606
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS--ASVASLEKGKDLHGKIIK 479
++ G + +L V + E+ ++T VL A+ A E+ K L KI K
Sbjct: 607 LLCGCRNYHDIELAEKVAERVF---ELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGK 663
Query: 480 LGF 482
G
Sbjct: 664 QGL 666
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 31/307 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY-----LGSRKSLEANEIVKDLNGFDLVVHN-- 91
G+ +H ++ + ++ L+ MY + + S+ + +VKD+ ++ ++
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELK 429
Query: 92 -------CMINANIQWGNLEEAQRLFDGMPERNEVS-----WTALISGFMKHGRVEESMW 139
C++ A LE + + G RN S AL+ ++K G + +
Sbjct: 430 PDSRTMACVLPACASLSALERGKEIH-GYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ P ++++SWT I G+ +G+ EA+ F ++ ++G++P+EV+F SI AC+
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 200 FRLGLSVFGLIFKAGF--EKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVI 256
G F I K F E + ++ L + G + A + + D W +
Sbjct: 549 LEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGAL 607
Query: 257 LDVFIEMGD--LGE--ARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYS 311
L D L E A R+F+ PE + V++A Y ++ EE RL ++ +
Sbjct: 608 LCGCRNYHDIELAEKVAERVFELEPE--NTGYYVLLANIYAEAEKWEEVKRLREKIGKQG 665
Query: 312 FKPNTSC 318
+ N C
Sbjct: 666 LRKNPGC 672
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 283/479 (59%), Gaps = 47/479 (9%)
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
+I+ L+ + DLAR +FD+M +RD+ SW V+L ++ DL AR +F+ MPER+ VSW
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ M++ Y Q+G+ +EA +F +M LK
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMP----------------------------------LK 86
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
GI N L+ Y + G +D + +F+S ++ + VSWN ++GG+ + +
Sbjct: 87 NGIS-----WNGLLAAYVQNGRIEDAKRLFESKMDWTL---VSWNCLMGGF-----VRKR 133
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+ LFDNMP+R+ +SWSA+I+GY ++ + F EM E N+S+F+ L +++
Sbjct: 134 RNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNI 193
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
A+LE G+ LH +++K G+ ++G AL Y K G I+ +R F + +K+ +SW M+
Sbjct: 194 AALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMI 253
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G A G+ +E++ +FE M+ T I P++ T++SVL ACSH+GLVD+G +YF SM Y I
Sbjct: 254 HGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGI 313
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
HYTC+VD+L R+G+L EA++ + +MPFEPD+ W +LL + + N ++ E+A +
Sbjct: 314 TAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQ 373
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
++++ + Y+LLS +YA++GRW DA +R M KG++K G SW+EV+N++H F
Sbjct: 374 IIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTF 432
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 223/479 (46%), Gaps = 91/479 (18%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
MI+ ++ + A+ LFD MPER+ SW +++G++++ ++ + FER P ++++SW
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 153 TAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
A + G+ QNGF EA ++F K+ L++G+
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGIS------------------------------ 90
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
N L+ ++ G ++ A+ +F+ +VSW ++ F+ + R
Sbjct: 91 ----------WNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVR-----KRRN 135
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FD MP+R+ +SWS MIA Y+Q+G EEA F +M R + N S F+ LS +++ A
Sbjct: 136 LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAA 195
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G +H ++K G + ++ NAL+ +Y KCG + R F I+EKD VVSWN+M
Sbjct: 196 LELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKD---VVSWNTM 252
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GY +G EEA VF M +G P+
Sbjct: 253 IHGYARHGFGEEA-------------------------------LTVFELMKTTGIRPDD 281
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
+T SVL A + +++G + + + G + T + D ++G +E ++ +
Sbjct: 282 ATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMK 341
Query: 511 RMP-DKNEISWTVM-----VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
MP + + +W + + G E G +++ + EME + +LS L+A S
Sbjct: 342 NMPFEPDAATWGALLGASRIHGNTELG--EKAAQIIFEMEPHN--SGMYILLSKLYAAS 396
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 166/369 (44%), Gaps = 62/369 (16%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
+L Y+ +R A + + + D+V N M++ Q G ++EA+ +F MP +N +SW
Sbjct: 32 MLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPLKNGISW 91
Query: 122 TALISGFMKHGRVEESMWYFE---------------------RNPFQNV-----ISWTAA 155
L++ ++++GR+E++ FE RN F N+ ISW+A
Sbjct: 92 NGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAM 151
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I G+ QNG S EAL F+++ + N +F+ C+ I LG + + KAG+
Sbjct: 152 IAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGY 211
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ V N+L+ + K G +D AR F + ++DVVSW
Sbjct: 212 QTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSW---------------------- 249
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+ MI Y + G+ EEA +F M +P+ + VL+A + + G
Sbjct: 250 ---------NTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQG 300
Query: 336 M-HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR-LVFDSIVEKDVAHVVSWNSMIG 393
+ ++ GI + ++DL + G+ ++ + L+ + E D A +W +++G
Sbjct: 301 SEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAA---TWGALLG 357
Query: 394 GYGLNGQME 402
++G E
Sbjct: 358 ASRIHGNTE 366
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 144/383 (37%), Gaps = 85/383 (22%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
+SF + TC +I + L GR LH L+K G Y+ LL MY
Sbjct: 181 SSFTCALSTC----SNIAALEL---GRQLHCRLVKAGYQTGWYVGNALLAMY-------- 225
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ G+++EA+ F + E++ VSW +I G+ +H
Sbjct: 226 -----------------------CKCGSIDEARDAFQEILEKDVVSWNTMIHGYARH--- 259
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
GF EAL +F + +G++P++ T S+ AC
Sbjct: 260 ----------------------------GFGEEALTVFELMKTTGIRPDDATMVSVLAAC 291
Query: 195 AEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVS 252
+ G F + G + ++ L + G+++ A+++ M + D +
Sbjct: 292 SHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAAT 351
Query: 253 WTVILDVFIEMG--DLGE-ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
W +L G +LGE A +I EM N + ++ Y SG +A ++ +M
Sbjct: 352 WGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRN 411
Query: 310 YSFK--PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
K P S L + + G H H KI F+ + L + G
Sbjct: 412 KGVKKVPGYSW----LEVQNKIHTFKVGDTSHPHTDKI----YTFLEEMDLKLKQE-GYI 462
Query: 368 KDGRLVFDSIVEKDVAHVVSWNS 390
LVF + E++ H++ ++S
Sbjct: 463 SSTNLVFHDVEEEEKVHMLKYHS 485
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 209/691 (30%), Positives = 334/691 (48%), Gaps = 117/691 (16%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKE--RYLTTRLLIMYLGSRKSLEANEIVKDLN 83
CL + N I + + LI + HK + + RLL++ L +
Sbjct: 6 CLASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGL-------------QFS 52
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF + +I+A+ +G++ A+++FD +P W A+I G Y
Sbjct: 53 GFLITK---LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG------------YSRN 97
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
N FQ +AL ++ + + V P+ TF + KAC+ ++ ++G
Sbjct: 98 NHFQ-------------------DALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V +F+ GF+ V V N LI L K + AR+VF+ +
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----------------- 181
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
+PER VSW+ +++ Y Q+G P EA +F M + KP+ VL
Sbjct: 182 ------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVL 229
Query: 324 SALASLKALRSGMHVHAHVLKIG--IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+A L+ L+ G +HA V+K+G IE D+ IS L +Y+KCG
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCG---------------- 271
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
Q+ AK LFD M N + W+A+ISGY ++ +F+E
Sbjct: 272 ------------------QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M+ P+ + +S + A A V SLE+ + ++ + + + DVF+ +AL D +AK G
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+E +R VFDR D++ + W+ M+ G G A+E+I+L+ ME+ + PN++T L +L A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+HSG+V +G +FN M + I P +HY CV+D+L R+G L +A + I MP +P
Sbjct: 434 CNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LLS CK +++ ++ E A + L+ + + YV LSN+YA+A W VR M
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
EKGL K GCSWVEVR ++ F +P+
Sbjct: 553 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 55/300 (18%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
TCL LK QGR++H ++K G+ E L L MY + A + +
Sbjct: 233 TCLQDLK---------QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 83 NGFDLVVHNCMIN-----------------------------------ANIQWGNLEEAQ 107
+L++ N MI+ A Q G+LE+A+
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 108 RLFDGMPE---RNEVSWT-ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+++ + R++V + ALI F K G VE + F+R ++V+ W+A I G+ +G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ EA+ L+ + GV PN+VTF + AC R G F L+
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYA 463
Query: 224 SLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDV-----FIEMGDLGEARRIFDEMP 277
+I L + G +D A V M + V W +L +E+G+ A+++F P
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA-AQQLFSIDP 522
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 311/578 (53%), Gaps = 58/578 (10%)
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
HG VE+ PF W A I AL F +LE+GV ++ + S +
Sbjct: 55 HGEVED--------PFL----WNAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLV 102
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
KAC+ + + G+ + G + K G + + N LI L LK G + AR +FDRM +RD
Sbjct: 103 LKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDS 162
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPE--RNEVSWSVMIARYNQ-SGYPEEAFRLFRQM 307
VS+ ++D +++ G +G AR +FD MP+ +N +SW+ MI+ Y Q S A +LF +M
Sbjct: 163 VSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEM 222
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
EKD+ N+LID Y K G
Sbjct: 223 P---------------------------------------EKDLISWNSLIDGYVKHGRM 243
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
+D + +F + +DV V+W +MI GY G + +AK LFD MP R+ V+++++++GY+
Sbjct: 244 EDAKDLFYVMPRRDV---VTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYV 300
Query: 428 EHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
++K +F++M + P+++T VL A A + L K D+H I++ F
Sbjct: 301 QNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGG 360
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
LG AL D Y+K G I+ + VF+R+ +K+ W M+ GLA G + + ++ E+E+
Sbjct: 361 KLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLEIERR 420
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
SI P+++T + +L ACSHSGLV +GL F M + I+P +HY C+VD+LSRSG +
Sbjct: 421 SIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 480
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A++ I MP EP+ W + L+ C +K + E K+L A +P+ YVLLSN+YAS
Sbjct: 481 AKNLIEEMPMEPNDVIWRTFLTACSHHKEFETGEVVAKHLILQAGYNPSSYVLLSNMYAS 540
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
G W DA VR +M E+ L+K GCSW+E+ +VH FF
Sbjct: 541 FGMWKDARRVRTMMKERELQKVPGCSWIELDGRVHEFF 578
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 229/503 (45%), Gaps = 116/503 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V +G +HG L KTGI D
Sbjct: 102 VLKACSRLGFVQEGMQIHGFLRKTGIWS-------------------------------D 130
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP- 145
L + NC+I ++ G L A+++FD MP+R+ VS+ ++I G++K G + + F+ P
Sbjct: 131 LFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPK 190
Query: 146 -FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+N+ISW + I G+ Q +D G+
Sbjct: 191 EMKNLISWNSMISGYAQT-----------------------------------SD---GV 212
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++ +F EK + NSLI +K G ++ A+ +F M +RDVV+W ++D + ++G
Sbjct: 213 NIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLG 272
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVL 323
+ +A+ +FD+MP R+ V+++ M+A Y Q+ Y EA +F M + S P+ + IVL
Sbjct: 273 FVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVL 332
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISN----ALIDLYSKCGETKDGRLVFDSIVE 379
SA+A L L M +H ++ +EK F+ ALID+YSKCG + LVF+ I
Sbjct: 333 SAIAQLGRLSKAMDMHLYI----VEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIEN 388
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF-AV 438
K + H WN+MIGG ++G E A ++ + +R+ K D+ F +
Sbjct: 389 KSIDH---WNAMIGGLAIHGLGESAFDMLLEIERRSI-------------KPDDITFVGI 432
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
N SG + +LC + + + ++ G + D ++
Sbjct: 433 LNACSHSGLVKE-----GLLCFEL----MRRKHKIEPRLQHYG---------CMVDILSR 474
Query: 499 SGDIESSRRVFDRMP-DKNEISW 520
SG IE ++ + + MP + N++ W
Sbjct: 475 SGSIELAKNLIEEMPMEPNDVIW 497
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 170/395 (43%), Gaps = 77/395 (19%)
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A+++ ++ DL+ N +I+ ++ G +E+A+ LF MP R+ V+W +I G+ K G V
Sbjct: 215 ASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFV 274
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKA 193
++ F++ P ++V+++ + + G+VQN ++ EAL++F + ES + P+E T + A
Sbjct: 275 HKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSA 334
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
A++ + + I + F + +LI + K G + A VF+R+E + +
Sbjct: 335 IAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSI--- 391
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
W+ MI G E AF + ++ R S K
Sbjct: 392 ----------------------------DHWNAMIGGLAIHGLGESAFDMLLEIERRSIK 423
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F +L+A S G K+G L
Sbjct: 424 PDDITFVGILNAC-----------------------------------SHSGLVKEGLLC 448
Query: 374 FDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYL 427
F+ + +E + H + M+ +G +E AK L + MP + NDV W ++
Sbjct: 449 FELMRRKHKIEPRLQH---YGCMVDILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTACS 505
Query: 428 EHKQFDLVFAVFNEMLL-SGEIPNKSTFSSVLCAS 461
HK+F+ V ++L +G P+ S + AS
Sbjct: 506 HHKEFETGEVVAKHLILQAGYNPSSYVLLSNMYAS 540
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 311/580 (53%), Gaps = 66/580 (11%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
I+ ++K G V + F + ++ISW I G ++G +L+LF+ LL SG+ P++
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 185 VTFSSICKACAEIND-FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
T +S+ +AC+ + + + +G V KAG V +S ++
Sbjct: 399 FTITSVLRACSSLEESYCVGRQVHTCALKAGI-----VLDSFVS---------------- 437
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
T ++DV+ + G + EA +F + SW+ M+ + S EA RL
Sbjct: 438 ----------TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRL 487
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F M K + F+ A L L+ G +HA V+K+ D+F+ + ++D+Y K
Sbjct: 488 FSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLK 547
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CGE M+ A+++F+ +P +DV+W+ +I
Sbjct: 548 CGE----------------------------------MKSARKVFNQIPSPDDVAWTTVI 573
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
SG +E+ + + +++M L+G P++ TF++++ A + + +LE+GK +H I+KL
Sbjct: 574 SGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCA 633
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+D F+ T+L D YAK G+IE + +F RM ++ W M+ GLA+ G A+E++N F EM
Sbjct: 634 FDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEM 693
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ +TP+ +T + VL ACSHSGL K F+SM+ Y ++P HY+C+VD LSR+G
Sbjct: 694 KSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGH 753
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
+ EAE ++SMPFE + + +LL+ C+ +++ ER + L+ + A YVLLSNI
Sbjct: 754 IQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNI 813
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA+A +W +A++ R +M ++K G SW++++N+VH F
Sbjct: 814 YAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLF 853
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 163/712 (22%), Positives = 291/712 (40%), Gaps = 159/712 (22%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ + + +I G+ H ++ +G++ +RY+T L+ MY
Sbjct: 19 ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMY-------------------- 58
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERN 144
+ G+L A++LFD P+ R+ V++ A+++ + G + + E+
Sbjct: 59 -----------AKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHD----VEK- 102
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+ EA +F L +S + T S + K C
Sbjct: 103 --------------------THEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASE 142
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++ G K G + V V +L+ + K + AR +FDRM RDVV W V++ ++EMG
Sbjct: 143 ALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMG 202
Query: 265 DLGE-------------------------------------------ARRIFDEMPERNE 281
E A ++F + +
Sbjct: 203 AGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDV 262
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
W+ ++ Y Q+G EA FR M + ++ + ++LS +ASL L G +H
Sbjct: 263 TVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGA 322
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
V++ G ++ V ++N+ I++Y K G R +F + E D ++SWN++I G +G +
Sbjct: 323 VVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD---LISWNTVISGCARSG-L 378
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EE +F ++L SG +P++ T +SVL A
Sbjct: 379 EECS------------------------------LRLFIDLLRSGLLPDQFTITSVLRAC 408
Query: 462 ASV-ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+S+ S G+ +H +K G D F+ TAL D Y+K G +E + +F + SW
Sbjct: 409 SSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASW 468
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ G S +E++ LF M + +++T + A + +G +
Sbjct: 469 NAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQG-------KQ 521
Query: 581 IYNIKPNGR-HY-----TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
I+ + R HY + ++DM + G + A N +P PD AW +++SGC
Sbjct: 522 IHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENG 580
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA-------GRWIDAMNVRKL 679
E+ A + +LA P Y + + A + G+ I A N+ KL
Sbjct: 581 EEEQALFTYHQM-RLAGVQPDEYTFATLVKACSLLTALEQGKQIHA-NIMKL 630
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 208/495 (42%), Gaps = 102/495 (20%)
Query: 30 DITSQNLVIQGRALHG----------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV 79
D+ S N VI G A G L+++G+ +++ T +L + SLE + V
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL----RACSSLEESYCV 417
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
VH C + A I + D TALI + K G++EE+
Sbjct: 418 GRQ------VHTCALKAGI----------VLDSFVS------TALIDVYSKGGKMEEAEL 455
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F ++ SW A + GF + EAL+LF + E G K +++TF++ KA +
Sbjct: 456 LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVR 515
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
+ G + ++ K F + V + ++ + LK GE+ AR VF+++ D V+WT ++
Sbjct: 516 LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+E G+ E+A + QM +P+ F
Sbjct: 576 CVENGE-------------------------------EEQALFTYHQMRLAGVQPDEYTF 604
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ ++ A + L AL G +HA+++K+ D F+ +L+D+Y+KCG +D +F +
Sbjct: 605 ATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNT 664
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ VA WN+MI G +G EEA F+ M R
Sbjct: 665 RSVA---LWNAMIVGLAQHGNAEEALNFFNEMKSR------------------------- 696
Query: 440 NEMLLSGEIPNKSTFSSVLCA-SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
G P++ TF VL A S S + + K+ G ++ + L D ++
Sbjct: 697 ------GVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSR 750
Query: 499 SGDIESSRRVFDRMP 513
+G I+ + +V MP
Sbjct: 751 AGHIQEAEKVVSSMP 765
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 106/262 (40%), Gaps = 50/262 (19%)
Query: 8 LFSINP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
L + P E +F + ++ C L + QG+ +H +++K + ++ T L+ MY
Sbjct: 594 LAGVQPDEYTFATLVKACSLL-------TALEQGKQIHANIMKLNCAFDPFVMTSLVDMY 646
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
+ GN+E+A LF M R+ W A+I
Sbjct: 647 -------------------------------AKCGNIEDAYGLFRRMNTRSVALWNAMIV 675
Query: 127 GFMKHGRVEESMWYF----ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVK 181
G +HG EE++ +F R + +++ + +G + +A K F + ++ GV+
Sbjct: 676 GLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVE 735
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P +S + A + + V + FE ++ +L+ G+ + V
Sbjct: 736 PEIEHYSCLVDALSRAGHIQEAEKV---VSSMPFEASATMYRTLLNACRVQGDKETGERV 792
Query: 242 FDR---MEKRDVVSWTVILDVF 260
++ M+ D ++ ++ +++
Sbjct: 793 AEKLFTMDPSDSAAYVLLSNIY 814
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 221/762 (29%), Positives = 365/762 (47%), Gaps = 115/762 (15%)
Query: 1 MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
+ ++ +L + E++ N+ + T LLK G+ LH L + + + L
Sbjct: 32 LHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLN 91
Query: 61 RLLIMYLGSRKSLEANEIVKDLNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPER-- 116
L+ +Y S + A I + + D+V ++ +I+ N +A +FD + +
Sbjct: 92 SLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDG 151
Query: 117 ---NEVSWTALI-----SGFMKHG----------------------------------RV 134
NE +TA+I GF K G +
Sbjct: 152 VYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADL 211
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKA 193
E + F++ +NV++WT I Q G++ EA+ LFL++L SG P+ T + +
Sbjct: 212 ESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISV 271
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CAEI LG + + ++G + V SL+
Sbjct: 272 CAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLV--------------------------- 304
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG--YPEEAFRLFRQMT-RY 310
D++ + G + EAR++FD M E N +SW+ ++ Y + G Y EA R+F M +
Sbjct: 305 ----DMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQG 360
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
PN FS VL A ASL G VH +K+G+ + N L+ +Y+K
Sbjct: 361 GVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAK------- 413
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+G+ME A++ FD + ++N VS + + ++
Sbjct: 414 ---------------------------SGRMESARKCFDVLFEKNLVSETVVDDTNVKDF 446
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+ + E+ G + T++S+L +A + ++ KG+ +H ++K+GF D+ +
Sbjct: 447 NLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNN 506
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL Y+K G+ E++ +VF+ M D N I+WT ++ G A+ G+A +++ LF M +T + P
Sbjct: 507 ALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKP 566
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
N++T ++VL ACSH GL+D+ K+F SM + I P HY C+VD+L RSG LSEA +F
Sbjct: 567 NDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEF 626
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
INSMPF+ D+ W + L C+ ++N ++ E A K + + PA Y+LLSN+YA+ GRW
Sbjct: 627 INSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRW 686
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
D +RK M +K + K G SW+EV NQVH F +PK
Sbjct: 687 EDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPK 728
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/680 (30%), Positives = 310/680 (45%), Gaps = 135/680 (19%)
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHG----------RVEESMWYFERNPFQNVISW 152
+E A+RLF GMPE+N VSW AL++G+ + G +++E F + V+
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 153 TAAI-------------------------CGFV----QNGFSFEALKLFLK--------- 174
A C V + G ++ALK+F K
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 175 ----------------------LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
+ G +PN+ T SS+ + D R G S+ G I K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
GFE V N LI + +K V+ VF+ M D+VSW +L F + G RI
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
F QM FKPN F VL + +SL
Sbjct: 241 -------------------------------FYQMLLEGFKPNMFTFISVLRSCSSLLDP 269
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G VHAH++K + D F+ AL+D+Y+K +D + FD +V +D + SW +I
Sbjct: 270 EFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRD---IFSWTVII 326
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
GY Q E+A + F M + G PN+
Sbjct: 327 SGYAQTDQAEKAVKYFRQMQRE-------------------------------GIKPNEY 355
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T +S L + +A+LE G+ LH +K G D+F+G+AL D Y K G +E + +F +
Sbjct: 356 TLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
++ +SW ++ G ++ G ++++ F M I P+E T + VL ACS GLV++G
Sbjct: 416 ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGK 475
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
K F+SM IY I P+ HY C+VD+L R+G+ +E + FI M P S W ++L CK
Sbjct: 476 KRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKL 535
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
+ N E+A K L+++ + Y+LLSNI+AS GRW D N+R LMT +G++K GCS
Sbjct: 536 HGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCS 595
Query: 693 WVEVRNQVHFFFQKTDHNPK 712
WVEV QVH F + +PK
Sbjct: 596 WVEVDGQVHVFLSQDGSHPK 615
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 154/612 (25%), Positives = 249/612 (40%), Gaps = 142/612 (23%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
ET F+ + T +LK + + +G+ LH +++G + +L L+ MY
Sbjct: 46 ETKFSKF--TLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVY 103
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISG-- 127
+A ++ + D+V + MI Q G+ +EA LF M + N+ + ++L+S
Sbjct: 104 DALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTAT 163
Query: 128 ---------------------------------FMKHGRVEESMWYFERNPFQNVISWTA 154
+MK VE+ FE +++SW A
Sbjct: 164 NMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNA 223
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
+ GF + ++F ++L G KPN TF S+ ++C+ + D G V I K
Sbjct: 224 LLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNS 283
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+ V +L+ + K ++ A FDR+ RD+ SWTVI
Sbjct: 284 SDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVI------------------ 325
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
I+ Y Q+ E+A + FRQM R KPN + LS + + L +
Sbjct: 326 -------------ISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLEN 372
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +HA +K G D+F+ +AL+DLY KCG + +F ++ +D +VSWN++I G
Sbjct: 373 GRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRD---IVSWNTIISG 429
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y +GQ E+A E F ML G +P+++TF
Sbjct: 430 YSQHGQGEKALE-------------------------------AFRMMLSEGIMPDEATF 458
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
VL A + + +E+GK +D +++ Y + IE
Sbjct: 459 IGVLSACSFMGLVEEGKK----------RFD-----SMSKIYGINPSIE----------- 492
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD---KG 571
+ MV L +G E EEM ++TP L +VL AC G VD K
Sbjct: 493 ----HYACMVDILGRAGKFNEVKIFIEEM---NLTPYSLIWETVLGACKLHGNVDFGEKA 545
Query: 572 LKYFNSMEPIYN 583
K MEP+ +
Sbjct: 546 AKKLFEMEPMMD 557
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 292/526 (55%), Gaps = 34/526 (6%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
FS + ++C ++ G V LI +G K + N L+ K+G+ + +F M
Sbjct: 65 FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+R+V+S+ ++++ ++++GDL A+++FDEM ERN +W+ MIA Q + ++A LF++
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M F P+ VL A L++L +G VHA +LK G E + ++L +Y K G
Sbjct: 185 MYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGS 244
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
DG ++L +MP R V+W+ +I+G
Sbjct: 245 LSDG----------------------------------EKLIKSMPIRTVVAWNTLIAGK 270
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
++ + V +N M ++G P+K TF SVL A + +A+L +G+ +H ++IK G +
Sbjct: 271 AQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVL 330
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ ++L Y++SG +E S + F + + + W+ M+ G +E++ LF +ME
Sbjct: 331 AVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDL 390
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ NE+T LS+L+ACSHSGL +KG +YF+ M Y +KP HYTCVVD+L R+GRL E
Sbjct: 391 KMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEE 450
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE I SMP +PD W +LL+ CK +K ++AER + + KL A YVLLSNI+AS
Sbjct: 451 AEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHAS 510
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A W++ +RK M ++ +RK G SW+E++N VH F +P+
Sbjct: 511 ARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQ 556
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 172/320 (53%), Gaps = 15/320 (4%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ S FS +L + L +L G VH+ ++ G KD FISN L++ YSK G+ K ++F
Sbjct: 61 DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
++ ++ V+S+N +I GY G +E A++LFD M +RN +W+A+I+G + +
Sbjct: 121 SNMPRRN---VMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQ 177
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
++F EM G +P++ T SVL A + SL G+++H ++K GF +G++L
Sbjct: 178 ALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAH 237
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y KSG + ++ MP + ++W ++ G A++G +E +N + M+ P+++T
Sbjct: 238 MYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKIT 297
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV----DMLSRSGRLSEA-ED 609
+SVL ACS + +G + + IK VV M SRSG L ++ +
Sbjct: 298 FVSVLSACSELATLGQGQQIHAEV-----IKAGASSVLAVVSSLISMYSRSGCLEDSIKA 352
Query: 610 FINSMPFEPDSNAWASLLSG 629
F++ F D W+S+++
Sbjct: 353 FVDRENF--DVVLWSSMIAA 370
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 192/443 (43%), Gaps = 71/443 (16%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D + N ++N + G + + LF MP RN +S+ LI+G+++ G +E + F+
Sbjct: 96 DKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMS 155
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N+ +W A I G Q F+ +AL LF ++ G P+E T S+ + CA + G
Sbjct: 156 ERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQE 215
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V + K GFE V +SL + +K G + + M R V
Sbjct: 216 VHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTV--------------- 260
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
V+W+ +IA Q+G PEE + M F+P+ F VLSA
Sbjct: 261 ----------------VAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSA 304
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L L G +HA V+K G + + ++LI +YS+ G +D F V+++ V
Sbjct: 305 CSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAF---VDRENFDV 361
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V W+SMI YG +G+ EEA ELF M D+ A
Sbjct: 362 VLWSSMIAAYGFHGRGEEALELFHQM---EDLKMEA------------------------ 394
Query: 446 GEIPNKSTFSSVLCASASVASLEKGK---DLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
N+ TF S+L A + EKG DL K KL + + T + D ++G +
Sbjct: 395 ----NEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHY--TCVVDLLGRAGRL 448
Query: 503 ESSRRVFDRMP-DKNEISWTVMV 524
E + + MP + I W ++
Sbjct: 449 EEAEGMIRSMPVQPDGIIWKTLL 471
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ +H +IK G + + L+ MY S ++ + D FD+V+ + MI A
Sbjct: 313 QGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYG 372
Query: 99 QWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFE 142
G EEA LF M E NEV++ +L+ G E+ YF+
Sbjct: 373 FHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFD 420
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/698 (29%), Positives = 340/698 (48%), Gaps = 110/698 (15%)
Query: 42 ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWG 101
+LH ++K G + ++++ L+ MY + EA + D+ D V N MI Q G
Sbjct: 62 SLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRG 121
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFM-------------------------------- 129
EEA LF M E +W L+S F
Sbjct: 122 LNEEACGLFCSMINSCE-NWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 130 ------------KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
K G ++ + F++ +++++W I G+ QN + EA++LF ++
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
G KPN+ TF + KA ++D +G + K G C+
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLG-------CS-------------- 279
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
DV T ++D++ + D+ + R F EM +RN VS++ +I Y+ G
Sbjct: 280 ----------MDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKY 329
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEA R++ Q+ +P++ F + S+ + + G VH H +K G++ DV + N++
Sbjct: 330 EEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSI 389
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
++ YSKCG T + A E F+++ + N V
Sbjct: 390 VNFYSKCGFT----------------------------------DSALEAFESINRPNSV 415
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
W+ IISG+ ++ + + F +M + ++ + SSV+ A +S A++E+G+ LH +
Sbjct: 416 CWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHV 475
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
+K G +++G+A+ D Y+K G +E +++VF MP+KN +SW M+ G A++G+ KE++
Sbjct: 476 MKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEAL 535
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF+EM + I P +T + +LFACSH+GLV++G ++N M Y I P+ H TC+VD+
Sbjct: 536 LLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDL 595
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L R+G L EAE F+ S F + W SLLS C +KN + RA ++ L + + Y
Sbjct: 596 LGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSY 655
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
LSNIYAS W + +R LM + G+ K GCSW+E
Sbjct: 656 TALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 240/507 (47%), Gaps = 76/507 (14%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV+ WT+ I + G +AL FL++L +G++PN +T+S+ ACA+ L S+
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
LI K GF + V + LI++ K + AR +FD M +RD VS
Sbjct: 65 CLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVS--------------- 109
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY--SFKPNTSCFSI--VL 323
W+ MIA Y+Q G EEA LF M ++K S F++ VL
Sbjct: 110 ----------------WNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVL 153
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A L R G VH + +KIG + D+F+S + + +Y KCG L FD I KD
Sbjct: 154 KACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKD-- 211
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+V+WN+MI GY N EEA EL F +M
Sbjct: 212 -IVAWNTMITGYAQNCYEEEAIEL-------------------------------FYQME 239
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
L G PN +TF VL AS +++ G+ H K++KLG DVF+ TAL D Y+K DIE
Sbjct: 240 LEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
R F M +N +S+ ++ G + G +E++ ++ +++ + P+ T + + +CS
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359
Query: 564 HSGLVDKGLK-YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
S V +G + + +S++ + + + +V+ S+ G A + S+ P+S
Sbjct: 360 VSSTVAEGAQVHVHSVK--FGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVC 416
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKL 649
WA ++SG + E+A+ K+
Sbjct: 417 WAGIISG---FAQNGEGEKALMQFCKM 440
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 175/400 (43%), Gaps = 65/400 (16%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
M E N V W+ I + G ++A F QM R +PN +S +SA A
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H +LK G +F+S+ LI +YSK K+ R +FD + E+D VSWNSMI GY
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERD---DVSWNSMIAGY 117
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G EEA LF +M + +W ++S + T +
Sbjct: 118 SQRGLNEEACGLFCSMINSCE-NWKLLVSDF--------------------------TLA 150
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+VL A + GK +HG +K+GF D+F+ + Y K G ++ + FD++ +K
Sbjct: 151 TVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENK 210
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA-----------CSH 564
+ ++W M+ G A++ Y +E+I LF +ME PN+ T VL A C H
Sbjct: 211 DIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFH 270
Query: 565 ---------------SGLVDKGLKYFN--SMEPIYN--IKPNGRHYTCVVDMLSRSGRLS 605
+ LVD K+++ +E + K N + ++ S G+
Sbjct: 271 AKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYE 330
Query: 606 EAEDF---INSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
EA + S EPDS + L S C + +AE A
Sbjct: 331 EALRVYSQLQSEGMEPDSFTFVGLFSSCSV--SSTVAEGA 368
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 139/337 (41%), Gaps = 44/337 (13%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C+LK T+ + GR H ++K G + ++ T L+ MY + ++
Sbjct: 249 TFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEM 308
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRL---------------FDGMPERNEVSWT----- 122
+ +LV N +I G EEA R+ F G+ VS T
Sbjct: 309 SKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGA 368
Query: 123 -------------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
++++ + K G + ++ FE N + W I GF QNG
Sbjct: 369 QVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNG 428
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+AL F K+ + K +E + SS+ KA + G + + K+G + + V +
Sbjct: 429 EGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGS 488
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER---- 279
++I + K G V+ A+ VF M +++VVSW ++ + + G EA +F EM
Sbjct: 489 AVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILP 548
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPN 315
V++ ++ + +G EE + M Y P+
Sbjct: 549 TAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPS 585
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 211/739 (28%), Positives = 358/739 (48%), Gaps = 106/739 (14%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
+SF + T + L+ +S + QGR +H H++ + + L +L MY +
Sbjct: 58 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 117
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF------DGMPER------------ 116
A E+ + +LV + +I Q G EA L+ D +P++
Sbjct: 118 AREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACAC 177
Query: 117 ---------------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
+ ++ ALI+ +++ ++ ++ F P +++ISW++
Sbjct: 178 AGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSI 237
Query: 156 ICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I GF Q GF FEAL ++L GV PNE F S KAC+ + G + GL K
Sbjct: 238 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLE 297
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+ ++ + D++ G L ARR+F+
Sbjct: 298 LTG-------------------------------NAIAGCSLCDMYARCGFLDSARRVFN 326
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
++ + SW+V+IA +GY +EA +F +M F P+ +L A AL
Sbjct: 327 QIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQ 386
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
GM +H+ ++K G D+ + N+L+ +Y+ C D F+
Sbjct: 387 GMQIHSFIIKCGFLADLSVCNSLLTMYTFCS---DLYCCFN------------------- 424
Query: 395 YGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
LF++ + D VSW+AI++ L+H+Q + +F ML+S P+ T
Sbjct: 425 ------------LFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 472
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
++L ++SL+ G +H K G + F+ L D YAK G + +RR+FD M
Sbjct: 473 MGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMD 532
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+ + +SW+ ++ G A+SG+ +E++ LF EM+ + I PN +T + VL ACSH GLV++GLK
Sbjct: 533 NGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLK 592
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ M+ + I P H +CVVD+L+R+G L+EAE FI+ M EPD W +LLS CKT
Sbjct: 593 LYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 652
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
N +A++A +N+ K+ + +VLL +++AS+G W DA +R M + ++K G SW
Sbjct: 653 GNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSW 712
Query: 694 VEVRNQVHFFFQKTDHNPK 712
++V +++H FF + +P+
Sbjct: 713 IDVEDKIHIFFAEDVLHPE 731
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 292/543 (53%), Gaps = 37/543 (6%)
Query: 167 EALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
L L+ LL SG +P+ +TF + KACA + G +V G + K GF V V N+
Sbjct: 103 HCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAA 162
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+ W+V G + ARR+FDE P R+ VSW+
Sbjct: 163 MHF------------------------WSV-------RGPMAFARRLFDESPVRDVVSWN 191
Query: 286 VMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+I Y +SG P EA LF ++ + +P+ +S A + L G +H V
Sbjct: 192 TLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVD 251
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
G+ V + NA++D+Y KCG + VF+ I + VSW +MI G+ G ME+
Sbjct: 252 NKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTA---VSWTTMIVGHARLGMMED 308
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A+ LFD MP+R+ W+A+++GY+++KQ A+F+EM S PN+ T ++L A +
Sbjct: 309 ARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQ 368
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
+ +LE G +H I + V LGT+L D YAK G+I+ + VF+ +P +N ++WT M
Sbjct: 369 LGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSM 428
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ GLA G+A E+I F+ M + P+E+T + VL AC H+GLV+ G ++F+ M Y+
Sbjct: 429 ICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYH 488
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
++ +HY+C++D+L R+G L EAE +N+MP +PD+ W +L C+ + N + E+A
Sbjct: 489 LERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAA 548
Query: 644 KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L +L YVLL+N+YA A A VR +M G+ K GCS +E+ VH F
Sbjct: 549 MKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEF 608
Query: 704 FQK 706
K
Sbjct: 609 IVK 611
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 38/387 (9%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEIN 198
F+ +P ++V+SW I G+V++G EAL+LF +L E G V+P+EVT CA++
Sbjct: 179 FDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMG 238
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
D LG + + G V + N+++ + +K G ++LA SVF+R+ R VSWT ++
Sbjct: 239 DLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIV 298
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+G + +AR +FDEMPER+ W+ ++A Y Q+ +EA LF +M + PN
Sbjct: 299 GHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEIT 358
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+LSA + L AL GM VH ++ + + V + +L+D+Y+KCG K VF+ I
Sbjct: 359 MVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEI- 417
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
V + ++W SMI G +G +EA E F M DL
Sbjct: 418 --PVQNALTWTSMICGLANHGHADEAIEYFQRM--------------------IDL---- 451
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYA 497
G P++ TF VL A +E G+ + K + + + D
Sbjct: 452 -------GLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLG 504
Query: 498 KSGDIESSRRVFDRMP-DKNEISWTVM 523
++G ++ + ++ + MP D + + W +
Sbjct: 505 RAGHLDEAEQLVNAMPMDPDAVVWGAL 531
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 142/317 (44%), Gaps = 44/317 (13%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ ++ G+LE A +F+ + R VSWT +I G + G +E++ F+ P ++V
Sbjct: 263 NAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVF 322
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
W A + G+VQN EA+ LF ++ +S V PNE+T ++ AC+++ +G+ V I
Sbjct: 323 PWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYI 382
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ V++ SL+ + K G + A VF+ + ++ ++WT
Sbjct: 383 DRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWT---------------- 426
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
MI G+ +EA F++M +P+ F VLSA
Sbjct: 427 ---------------SMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAG 471
Query: 331 ALRSG------MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ +G MH H +E+ + + +IDL + G + + +++ A
Sbjct: 472 LVEAGRQFFSLMHAKYH-----LERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDA- 525
Query: 385 VVSWNSMIGGYGLNGQM 401
V W ++ ++G +
Sbjct: 526 -VVWGALFFACRMHGNI 541
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 197/587 (33%), Positives = 317/587 (54%), Gaps = 39/587 (6%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-- 179
+ LIS + K G + ++ F + P +N+ SW A + + + LKLF L+ S
Sbjct: 42 SKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNST 101
Query: 180 -VKPNEVTFSSICKACAEI-NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
VKP+ T + KA A + ++ L V I + G E + V N+LIT + E+ L
Sbjct: 102 DVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVL 161
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR +FDR MPER+ VSW+ M+A Y+Q G
Sbjct: 162 ARIMFDR-------------------------------MPERDTVSWNAMLAGYSQGGSY 190
Query: 298 EEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EE LFR M + KPN VL A A L G+ VH V + I+ DV + NA
Sbjct: 191 EECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNA 250
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
+I LY+KCG R +F+ + EKD +++ SMI GY ++G + +A +LF +
Sbjct: 251 VIGLYAKCGILDYARELFEEMPEKDG---ITYCSMISGYMVHGFVNQAMDLFREQERPRL 307
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
+W+A+ISG +++ + + +F M G PN T +S+L + ++L+ GK++HG
Sbjct: 308 PTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGY 367
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
I+ + ++++ TA+ D+YAK G + ++ VFD++ ++ I+WT ++ A G A +
Sbjct: 368 AIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVA 427
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
++LF EM I P+++T SVL AC+HSG +D+ K FN + P Y I+P HY C+V
Sbjct: 428 LSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVG 487
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+LSR+G+LS+A +FI+ MP EP + W +LL+G + ++ + L+++ E+
Sbjct: 488 VLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGN 547
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YV+++N+Y+ +GRW DA +R LM E L+K G SW+E + F
Sbjct: 548 YVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF 594
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 170/331 (51%), Gaps = 8/331 (2%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ + N +I + G L+ A+ LF+ MPE++ +++ ++ISG+M HG V ++M F
Sbjct: 244 DVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQE 303
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ +W A I G VQN A+ +F + G +PN VT +SI + + + G
Sbjct: 304 RPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKE 363
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + +++++ V ++I K G + A+ VFD+++ R +++WT I+ + GD
Sbjct: 364 IHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGD 423
Query: 266 LGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQ-MTRYSFKPNTSCFS 320
A +F EM + ++V+++ ++A SG +EA+++F + Y +P ++
Sbjct: 424 ANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYA 483
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ L+ L + + K+ +E + AL++ S G+ + G+ VFD + E
Sbjct: 484 CMVGVLSRAGKLSDAVEF---ISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEI 540
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ + ++ M Y +G+ ++A + D M
Sbjct: 541 EPENTGNYVIMANLYSQSGRWKDADTIRDLM 571
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 140/278 (50%), Gaps = 17/278 (6%)
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
L+ + G+ RLV S+V + + +I Y +G + +A +F +P++N SW
Sbjct: 17 LFFRVGKQLHARLVLSSVVPDNFLG----SKLISFYSKSGSIRDAYNVFGKIPRKNIFSW 72
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK----GKDLHG 475
+A+ Y H + +F+ ++ S K +V C+ ++ASL K++H
Sbjct: 73 NALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHS 132
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
I++ G YD+F+ AL Y++ ++ +R +FDRMP+++ +SW M+ G ++ G +E
Sbjct: 133 FILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEE 192
Query: 536 SINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGL---KYFNSMEPIYNIKPNGRHY 591
LF M + PN LT +SVL AC+ S + G+ ++ N + IK + +
Sbjct: 193 CKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQ----IKMDVSLW 248
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
V+ + ++ G L A + MP E D + S++SG
Sbjct: 249 NAVIGLYAKCGILDYARELFEEMP-EKDGITYCSMISG 285
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 325/598 (54%), Gaps = 85/598 (14%)
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGFVQNGFSFEALKL 171
M ER+ V+WTA+ISG++K G + ++ F+R + ++V++WTA + G+V+
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVR---------- 50
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
LK +E + +F+ K+V N++I K
Sbjct: 51 -LKRIEEAER----------------------------LFEVMPVKNVVSWNTMIDGYGK 81
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
EVD A VF+RM +R++VSW ++ ++ G + EARR FDEMP+R+ +SW+ M+
Sbjct: 82 NREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGL 141
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
+SG +EA ++F +M E++V
Sbjct: 142 ARSGRVDEARKVFDRMP---------------------------------------ERNV 162
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
NA++ Y+K + +F+ + E++++ SWN+MI G+ NG++ A+++F+ M
Sbjct: 163 VSWNAMVTGYAKNMRLDEAFDLFERMPERNLS---SWNTMITGFIQNGELAWARKVFNEM 219
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKG 470
P++N VSW+ +I+GY++ + + VF EM+ G PN+ TF +VL A + +A L +G
Sbjct: 220 PEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEG 279
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR--MPDKNEISWTVMVRGLA 528
+ +H I K + F+ +AL + Y+K G++ +R++FD + ++ + W M+ A
Sbjct: 280 QQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYA 339
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G E+I LFE+M+ PN+++ + +L ACSH+GLVD+GL YF+ + +I+
Sbjct: 340 HHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLRE 399
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
H+ C+VD+ R+GRL EA DFI + + S+ W LL+GC + + +I + A K L K
Sbjct: 400 DHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEK 459
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
E+ Y+LLSNIYAS +W +A VR M EKGL+K GCSW+EV N+VH F +
Sbjct: 460 EDPENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVFLAR 517
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 214/440 (48%), Gaps = 63/440 (14%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T +L Y+ ++ EA + + + ++V N MI+ + +++A +F+ M ERN V
Sbjct: 42 TAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMV 101
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW A+I+ ++ GRVEE+ F+ P ++VISWT + G ++G EA K+F ++ E
Sbjct: 102 SWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERN 161
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V V+++++ A+ + RL F L F+ E+++S N++IT ++ GE+ AR
Sbjct: 162 V----VSWNAMVTGYAK--NMRLD-EAFDL-FERMPERNLSSWNTMITGFIQNGELAWAR 213
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
VF+ M +++VVSWT ++ ++ Q G E
Sbjct: 214 KVFNEMPEKNVVSWTTMITGYV-------------------------------QEGESES 242
Query: 300 AFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A ++F +M + +PN F VL A + + L G VH + K + F+++AL+
Sbjct: 243 ALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALL 302
Query: 359 DLYSKCGETKDGRLVFDSIV--EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP---- 412
++YSKCGE R +FD +V ++D +V WN MI Y +G EA ELF++M
Sbjct: 303 NMYSKCGELSIARKIFDDVVISQRD---LVLWNGMIAAYAHHGCGMEAIELFEDMQGLGF 359
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
K NDVS+ ++S D F+E+ I + + L D
Sbjct: 360 KPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLV------------D 407
Query: 473 LHGKIIKLGFPYDVF--LGT 490
L G+ +L YD LGT
Sbjct: 408 LCGRAGRLKEAYDFIKQLGT 427
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/703 (30%), Positives = 333/703 (47%), Gaps = 102/703 (14%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+ ++ ++T LLK +Q +I G+ LH K+ I YL+
Sbjct: 2 QCTYPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLS-------------- 47
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
N F L+ C G+L AQ F N S+ LI+ + KH
Sbjct: 48 ---------NHFTLLYSKC--------GSLHNAQTSFHLTQYPNVFSYNTLINAYAKHSL 90
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ + F+ P +++S+ I + G L+LF ++ E + + T S + A
Sbjct: 91 IHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITA 150
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C + D L + + G + + SV N+
Sbjct: 151 CGD--DVGLVRQLHCFVVVCGHDCYASVNNA----------------------------- 179
Query: 254 TVILDVFIEMGDLGEARRIFDEMPE---RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+L + G L EARR+F EM E R+EVSW+ MI Q EA LFR+M R
Sbjct: 180 --VLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRR 237
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
K + + VL+A +K L G H ++K G + + + LIDLYSKC
Sbjct: 238 GLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCA----- 292
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
G M E +++F+ + + V W+ +ISG+ ++
Sbjct: 293 ----------------------------GSMVECRKVFEEITAPDLVLWNTMISGFSLYE 324
Query: 431 QF-DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-VFL 488
+ F EM +G P+ +F V A ++++S GK +H IK PY+ V +
Sbjct: 325 DLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSV 384
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL Y+K G++ +RRVFD MP+ N +S M+ G A+ G ES+ LFE M + I
Sbjct: 385 NNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDI 444
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
PN +T ++VL AC H+G V++G KYFN M+ + I+P HY+C++D+L R+G+L EAE
Sbjct: 445 APNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAE 504
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
I +MPF P S WA+LL C+ + N ++A +A +L + A YV+LSN+YASA
Sbjct: 505 RIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAA 564
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
RW +A V++LM E+G++K GCSW+E+ +VH F + +P
Sbjct: 565 RWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHP 607
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/608 (31%), Positives = 310/608 (50%), Gaps = 79/608 (12%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIND 199
F++ P ++++SWTA I G+V SFEAL LF LL + V P+ S KAC + ++
Sbjct: 43 FDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKACGQSSN 102
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G S+ FK V V +L+ + ++ G++D
Sbjct: 103 IGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKID----------------------- 139
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ RIF EM RN V+W+ +++ ++G +E F +M+R + F
Sbjct: 140 --------KGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAF 191
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ L A A L+ ++ G +H HV+ G + + + N+LI++Y++CGE DG +F+S+ E
Sbjct: 192 ATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSE 251
Query: 380 KDVAHVVSW--------------------------------------------NSMIGGY 395
+DV SW NSM+ Y
Sbjct: 252 RDV---FSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLGDSLSVSNSMMKMY 308
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
G+++ A LF M +R+ ++WS II GY + + VF F+ M +G P +
Sbjct: 309 STCGKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALA 368
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
S+L S ++A LE+G+ +H + LG + + +AL + Y+K G IE + ++F+
Sbjct: 369 SLLSVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTD 428
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ +S T M+ G AE G KE+I+LFE+ K + P+ +T +SVL ACSHSG +D G +YF
Sbjct: 429 DIVSLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYF 488
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
N M+ YNI+P HY C+VD+L R+GRLS+AE IN MP++ D W +LL+ CK +
Sbjct: 489 NLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGD 548
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+ RA + + +L +V L+NIY+S G+ +A +VRK M KG+ K G S ++
Sbjct: 549 TERGRRAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVPGWSSIK 608
Query: 696 VRNQVHFF 703
+ ++ F
Sbjct: 609 IMDRASTF 616
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 245/562 (43%), Gaps = 72/562 (12%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA--------- 75
+ LL+ + + I + HL H++ T ++ Y+ + S EA
Sbjct: 20 ISLLEKPVEKIVRISNQGAARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLF 79
Query: 76 -NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ D + + + C ++NI +G A + V T L++ +M+ G++
Sbjct: 80 DPAVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVG-TNLLNMYMRTGKI 138
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
++ F F+N ++WTA + G V+ G E L F ++ S ++ F++ KAC
Sbjct: 139 DKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKAC 198
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A + + G + + G + + V NSLI + + GE+ +F+ M +RDV SWT
Sbjct: 199 ARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWT 258
Query: 255 VILDVFIEMGD--------------------------------------------LGEAR 270
++D + +MG L A
Sbjct: 259 TLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLGDSLSVSNSMMKMYSTCGKLDSAS 318
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+F M R+ ++WS +I Y+Q+G EE F F M + KP + +LS ++
Sbjct: 319 VLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMA 378
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
L G VHA L +G+E++ I +ALI++YSKCG ++ +F+ E D +VS +
Sbjct: 379 VLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFE---ETDTDDIVSLTA 435
Query: 391 MIGGYGLNGQMEEAKELFDNMPK---RND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
MI GY +G +EA +LF+ K R D V++ ++++ Q DL F FN M
Sbjct: 436 MINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLMQDEY 495
Query: 447 EI-PNKSTFS---SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
I P K + +LC + ++ EK I ++ + D + T L + GD
Sbjct: 496 NIRPVKEHYGCMVDLLCRAGRLSDAEK------MINEMPWKKDDVVWTTLLNACKAKGDT 549
Query: 503 ESSRRVFDRMPDKNEISWTVMV 524
E RR +R+ + + S T V
Sbjct: 550 ERGRRAAERILELDPTSETAFV 571
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 45/220 (20%)
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV-LFAC 562
++R +FD+MP ++ +SWT ++ G + + E++NLF + + ++LSV L AC
Sbjct: 38 AARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKAC 97
Query: 563 SHS-----------------------------------GLVDKGLKYFNSMEPIYNIKPN 587
S G +DKG + F M+ N
Sbjct: 98 GQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQF-----RN 152
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTYKNEQIAERAVK 644
+T +V + +GR E + + M D A+A+ L C + + +
Sbjct: 153 TVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHT 212
Query: 645 NLWKLAEEHPAGYV-LLSNIYASAGRWIDAMNVRKLMTEK 683
++ + V L N+Y G D +++ + M+E+
Sbjct: 213 HVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSER 252
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 306/556 (55%), Gaps = 44/556 (7%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W A I +AL LF +L++GV ++ + S + KAC+ + + G+ G +
Sbjct: 91 WNAVIKSHSHGVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVKEGMQXHGFLR 150
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K G + + N LI L LK G + AR VFDRM +RD VS+ ++D +++ G + AR
Sbjct: 151 KTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARE 210
Query: 272 IFDEMP--ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+FD MP ++N +SW+ MI +GY + A
Sbjct: 211 LFDLMPSEKKNLISWNSMI-----NGYAQRA----------------------------- 236
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
G+ + +++ EKD+ N+LID Y K G +D + +FD + +DV V+W
Sbjct: 237 ----DGVDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDV---VTWA 289
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI- 448
+M+ GY G + +AK LFD MP+R+ V+++++++GY++++ +FN+M +
Sbjct: 290 TMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLS 349
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+++T VL A A + L K D+H ++ F LG AL D Y+K G I+ + V
Sbjct: 350 PDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGV 409
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+R+ +K+ W M+ GLA G + + ++ ++E+ SI P+++T + VL ACSHSGLV
Sbjct: 410 FERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLV 469
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+GL F M+ + I+P +HY C+VD+LSRSGR+ A++ I MP EP+ W + L+
Sbjct: 470 KEGLLCFELMKRKHKIEPRLQHYGCMVDILSRSGRIELAKNLIEEMPIEPNDVIWRTFLT 529
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C +K + E K+L A +P+ YVLLSN+YAS G W + VR +M E+ ++K
Sbjct: 530 ACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASLGMWKEVRRVRTMMKERKIQKI 589
Query: 689 GGCSWVEVRNQVHFFF 704
GCSW+E+ VH FF
Sbjct: 590 PGCSWIELDGSVHEFF 605
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 219/491 (44%), Gaps = 126/491 (25%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL + NC+I ++ G L A+++FD M +R+ VS+ ++I G++K G +E + F+ P
Sbjct: 157 DLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMP 216
Query: 146 FQ--NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+ N+ISW + I G+ Q G
Sbjct: 217 SEKKNLISWNSMINGYAQRAD--------------------------------------G 238
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ + +F EK + NSLI +K G ++ A+ +FD+M +RDVV+W ++D + ++
Sbjct: 239 VDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKL 298
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIV 322
G + +A+ +FD+MP+R+ V+++ M+A Y Q+ Y EA +F M + S P+ + IV
Sbjct: 299 GFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIV 358
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISN----ALIDLYSKCGETKDGRLVFDSIV 378
LSA+A L L M +H + +EK + ALID+YSKCG + VF+ I
Sbjct: 359 LSAIAQLGRLSKAMDMHLYT----VEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIE 414
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
K + H WN+MIGG ++G E A ++ + +R+
Sbjct: 415 NKSIDH---WNAMIGGLAIHGLGESAFDMLLQIERRSIK--------------------- 450
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
P+ TF VL A + H ++K G
Sbjct: 451 ----------PDDITFVGVLNACS-----------HSGLVKEGL---------------- 473
Query: 499 SGDIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
F+ M K++I + MV L+ SG + + NL EEM I PN++
Sbjct: 474 --------LCFELMKRKHKIEPRLQHYGCMVDILSRSGRIELAKNLIEEM---PIEPNDV 522
Query: 554 TILSVLFACSH 564
+ L ACSH
Sbjct: 523 IWRTFLTACSH 533
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 210/484 (43%), Gaps = 94/484 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V +G HG L KTGI + +L L+ +YL A ++ ++ D
Sbjct: 129 VLKACSRLGFVKEGMQXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRD 188
Query: 87 LVVHNCMINANIQWGNLEEAQRL----------------------------------FDG 112
V +N MI+ ++ G +E A+ L FD
Sbjct: 189 SVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDE 248
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
MPE++ +SW +LI G++KHGR+E++ F++ P ++V++W + G+ + GF +A LF
Sbjct: 249 MPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLF 308
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL-- 230
++ + V V ++S+ + + +F + K E H+S + + + L
Sbjct: 309 DQMPQRDV----VAYNSMMAGYVQNRYHMEAIDIFNDMEK---ESHLSPDETTLVIVLSA 361
Query: 231 --KMGEVDLARSV-FDRMEKRDVVSWTV---ILDVFIEMGDLGEARRIFDEMPERNEVSW 284
++G + A + +EK+ ++ + ++D++ + G + +A +F+ + ++ W
Sbjct: 362 IAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHW 421
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ MI G E AF + Q+ R S KP+ F VL+A
Sbjct: 422 NAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNAC------------------ 463
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNG 399
S G K+G L F+ + +E + H + M+ +G
Sbjct: 464 -----------------SHSGLVKEGLLCFELMKRKHKIEPRLQH---YGCMVDILSRSG 503
Query: 400 QMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSV 457
++E AK L + MP + NDV W ++ HK+F+ V ++L +G P+ S
Sbjct: 504 RIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 563
Query: 458 LCAS 461
+ AS
Sbjct: 564 MYAS 567
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 276/458 (60%), Gaps = 7/458 (1%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ V++E G + A ++F++MP + VS++VMI Y + G+ EA RLF +M +P+
Sbjct: 104 LIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPD 163
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHV--LKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
+L + L ++ G VH + K I ++ + NAL+D+Y KC + +
Sbjct: 164 EFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRT 223
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F ++ EKD+ VSWN ++ G G++E+A+ F MP R+ VSW+++++GY F
Sbjct: 224 FGALKEKDI---VSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFA 280
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
V + +M++ IP+ T S++ A+ +L++G+ HG +I++ D FLG+AL
Sbjct: 281 SVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALI 340
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D Y K G IE + RVF + K+ WT M+ GLA GY +++ LF EM++ ++P+++
Sbjct: 341 DMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQE-DVSPDDV 399
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T +SVL ACSHSGLVD+G+K F+SM Y I+P HY C+VD+L+RSGRLSEA+D I+
Sbjct: 400 TFVSVLSACSHSGLVDQGIKVFSSMTD-YGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQ 458
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP +P + W ++L+ C+ + ++AE A + L L E GY LLSNIYA++GRW +
Sbjct: 459 MPMKPSRSIWGAMLNACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYS 518
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+R+ M +G++K+ GCS V V VH F +P
Sbjct: 519 KKIRETMESRGVKKTAGCSSVVVDGVVHNFISADKCHP 556
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 213/450 (47%), Gaps = 51/450 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI ++++G V + FE+ P +++S+ I G+ + GF EA++LF +++ G++P+
Sbjct: 104 LIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPD 163
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLI--FKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
E T + +C ++ + + G +V G + K ++ + N+L+ + +K +V+LA
Sbjct: 164 EFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRT 223
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F ++++D+VSW +I+ ++G+L +AR F +MP R+ VSW+ ++ Y G
Sbjct: 224 FGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVK 283
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
L M P+T ++SA AL G H V+++ I+ D F+ +ALID+Y
Sbjct: 284 ELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMY 343
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG + VF I +KDV W +MI G +G +A ELF M + DVS
Sbjct: 344 CKCGSIERASRVFKEINKKDVT---VWTTMITGLAFHGYGSKALELFSEM--QEDVS--- 395
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
P+ TF SVL A + +++G + + G
Sbjct: 396 ---------------------------PDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYG 428
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESG-------YA 533
V L D A+SG + ++ + D+MP K S W M+ G +
Sbjct: 429 IEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGDVELAEIAS 488
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACS 563
+E +NL E E T+LS ++A S
Sbjct: 489 RELLNLDPEEE------GGYTLLSNIYAAS 512
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 149/317 (47%), Gaps = 19/317 (5%)
Query: 30 DITSQNLVIQGRALHG----------HLIKTGIHKERYLTTRLLIM--YLGSRKSLEA-- 75
DI S N++I G A G ++ G+ + + LL+ LG+ K +A
Sbjct: 128 DIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVH 187
Query: 76 --NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
E K +L++ N +++ ++ +E A R F + E++ VSW +++G K G
Sbjct: 188 GWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGE 247
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+E++ +F + P ++++SW + + G+ G +L + ++ V P+ VT S+ A
Sbjct: 248 LEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSA 307
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
E G G + + + + ++LI + K G ++ A VF + K+DV W
Sbjct: 308 ATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKDVTVW 367
Query: 254 TVILDVFIEMGDLGEARRIFDEMPER---NEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
T ++ G +A +F EM E ++V++ +++ + SG ++ ++F MT Y
Sbjct: 368 TTMITGLAFHGYGSKALELFSEMQEDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTDY 427
Query: 311 SFKPNTSCFSIVLSALA 327
+P + ++ LA
Sbjct: 428 GIEPGVEHYGCLVDLLA 444
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 11/234 (4%)
Query: 401 MEEAKELFDNM-PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
++ A LF++ P N ++ +IS + K+ + F ++N +L SGE P+K T +L
Sbjct: 16 LDLAITLFNHFTPNPNLFIYNTLISAFSSLKKIE-SFYLYNVLLSSGECPDKQTLLYLLQ 74
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A V + + K +H + I G +L L Y ++G + + +VF++MP + +S
Sbjct: 75 A---VNFISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVS 131
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
+ VM+ G A+ G+ E++ LF EM + P+E TIL +L +C G V G ME
Sbjct: 132 FNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWME 191
Query: 580 ---PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
P I N ++DM + ++ A ++ E D +W +++GC
Sbjct: 192 RRKP--TISSNLILGNALLDMYVKCQKVELALRTFGALK-EKDIVSWNMIVAGC 242
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 164/364 (45%), Gaps = 43/364 (11%)
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A LF T PN ++ ++SA +SLK + S +++ +L G D L+
Sbjct: 19 AITLFNHFTP---NPNLFIYNTLISAFSSLKKIES-FYLYNVLLSSGECPDKQTLLYLLQ 74
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+ + K ++ +IV + N++I Y NG + A ++F+ MP + VS+
Sbjct: 75 AVNFISQVK--QIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSF 132
Query: 420 SAIISGYLEHKQFDL-VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI- 477
+ +I GY + K F L +F+EM+ G P++ T +L + + +++ GK +HG +
Sbjct: 133 NVMIVGYAK-KGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWME 191
Query: 478 -IKLGFPYDVFLGTALTDTY-------------------------------AKSGDIESS 505
K ++ LG AL D Y AK G++E +
Sbjct: 192 RRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQA 251
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R F +MP ++ +SW +V G A G L +M + P+ +T++S++ A + S
Sbjct: 252 RLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATES 311
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G +D+G ++ + IK + + ++DM + G + A + + D W +
Sbjct: 312 GALDQG-RWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEIN-KKDVTVWTT 369
Query: 626 LLSG 629
+++G
Sbjct: 370 MITG 373
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 69/309 (22%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + L+ T + QGR HG +I+ I + +L + L+ MY
Sbjct: 300 TMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMY---------------- 343
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G++E A R+F + +++ WT +I+G HG
Sbjct: 344 ---------------CKCGSIERASRVFKEINKKDVTVWTTMITGLAFHG---------- 378
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ +AL+LF ++ E V P++VTF S+ AC+
Sbjct: 379 ---------------------YGSKALELFSEMQED-VSPDDVTFVSVLSACSHSGLVDQ 416
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-WTVILDVFI 261
G+ VF + G E V L+ L + G + A+ + D+M + S W +L+
Sbjct: 417 GIKVFSSMTDYGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQ 476
Query: 262 EMGDLGEA----RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
GD+ A R + + PE E ++++ Y SG + ++ M K
Sbjct: 477 AQGDVELAEIASRELLNLDPEE-EGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTAG 535
Query: 318 CFSIVLSAL 326
C S+V+ +
Sbjct: 536 CSSVVVDGV 544
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 291/564 (51%), Gaps = 35/564 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+R P + ++ + I + +G EAL L +L G+ PNE T + KAC+
Sbjct: 64 FDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAA 123
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
L+ G+ K G+ + V V N+L+ S
Sbjct: 124 EHALATHGVAIKLGYVRQVFVGNALLHSS------------------------------- 152
Query: 261 IEMGDLGEARRIFDEM-PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
G L ++RR+F EM P RN VSW+ MI Q+G EA LFR+M R + F
Sbjct: 153 ASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTF 212
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+L + L G VH H+L G D+ + NAL+D+Y KCG+ FD +
Sbjct: 213 VSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPI 272
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
K+V VSW SM+ +G ++ A++ F+ MP+RN +SW+A+IS Y++ +F ++
Sbjct: 273 KNV---VSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLY 329
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
N M G P++ T + VL L G+ +H I V + +L D YA+
Sbjct: 330 NRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARC 389
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G +++S +F MP+KN ISW V++ LA G A+E++ F M + +P+E+T + +L
Sbjct: 390 GQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLL 449
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSH GL++ G YF +M IYN+KP HY C+VD+L R G L++A D I MP +PD
Sbjct: 450 SACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPD 509
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
W +L+ C+ + + +I + A+K L +L + +VL+SN+ +W D +RKL
Sbjct: 510 VVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKL 569
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFF 703
M ++G +K G S +E+ N +H F
Sbjct: 570 MRDRGTKKDMGVSSIEINNSIHEF 593
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 201/485 (41%), Gaps = 101/485 (20%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L ARR+FD +P+ + +++ +I Y+ SG P+EA L R + R PN VL A
Sbjct: 57 LCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKA 116
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ +A + H +K+G + VF+ NAL+ + G +D R +F + +V
Sbjct: 117 CSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHR--NV 174
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN+MIGG G+ EA A+F EM
Sbjct: 175 VSWNTMIGGCAQAGETSEA-------------------------------CALFREMRRQ 203
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + + TF S+L + +LE G+ +H ++ G D+ LG AL D Y K GD+ +
Sbjct: 204 GVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMA 263
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESG--------------------------YAK----- 534
R FD MP KN +SWT M+ LA+ G Y +
Sbjct: 264 HRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFP 323
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSG---------------LVDKGLKYFNSME 579
E++ L+ M+ +TP+E+T+ VL +G D G+ NS+
Sbjct: 324 ETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLI 383
Query: 580 PIYN---------------IKPNGRHYTCVVDMLSRSGRLSEAEDFINSM---PFEPDSN 621
+Y N + ++ L+ GR EA F +M F PD
Sbjct: 384 DMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEI 443
Query: 622 AWASLLSGCK---TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
+ LLS C ++ Q +A+++++ + E Y + ++ G A+++ K
Sbjct: 444 TFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPE-VEHYACMVDLLGRHGHLAKAVDLIK 502
Query: 679 LMTEK 683
M K
Sbjct: 503 DMPMK 507
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Query: 123 ALISGFMKHGRVEESMWYF-ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
AL+ G + +S F E P +NV+SW I G Q G + EA LF ++ GV
Sbjct: 147 ALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVL 206
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ TF S+ C++ + +G V + +G + + N+L+ + K G++ +A
Sbjct: 207 ADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRC 266
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M ++VVSWT +L + G + AR F++MPERN +SW+ MI+ Y Q G E
Sbjct: 267 FDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETL 326
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
L+ +M P+ + VLS L SG +H ++ + V + N+LID+Y
Sbjct: 327 GLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMY 386
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
++CG+ +F + K+ +SWN +IG ++G+ +EA F M
Sbjct: 387 ARCGQVDTSISLFTEMPNKN---TISWNVIIGALAMHGRAQEAVMFFRAM 433
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 148/299 (49%), Gaps = 8/299 (2%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL++ N +++ + G+L A R FD MP +N VSWT+++ KHG V+ + +FE+ P
Sbjct: 243 DLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMP 302
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N+ISW A I +VQ G E L L+ ++ G+ P+EVT + + + D G
Sbjct: 303 ERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRM 362
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I + + V+V NSLI + + G+VD + S+F M ++ +SW VI+ G
Sbjct: 363 IHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGR 422
Query: 266 LGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFS 320
EA F M +E+++ +++ + G E+ F+ M Y+ KP ++
Sbjct: 423 AQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYA 482
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
++ L L + + + + ++ DV + ALI G + G+L ++E
Sbjct: 483 CMVDLLGRHGHLAKAVDL---IKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLE 538
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 14/315 (4%)
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
S V V +V+ + G + + A+ +FD +P + +++++I Y
Sbjct: 32 SAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEA 91
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+ ++L G +PN+ T VL A + + E HG IKLG+ VF+G AL +
Sbjct: 92 LCLHRDVLRRGILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHS 151
Query: 496 YAKSGDIESSRRVFDRM-PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
A +G + SRR+F M P +N +SW M+ G A++G E+ LF EM + + + T
Sbjct: 152 SASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFT 211
Query: 555 ILSVLFACSHSGLVDKG----LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+S+L CS G ++ G S + I N +VDM + G L A
Sbjct: 212 FVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNA-----LVDMYGKCGDLWMAHRC 266
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
+ MP + + +W S+L C K+ + + A ++ E + + + + Y GR+
Sbjct: 267 FDVMPIK-NVVSWTSML--CALAKHGSV-DAARDWFEQMPERNIISWNAMISCYVQGGRF 322
Query: 671 IDAMNVRKLMTEKGL 685
+ + + M GL
Sbjct: 323 PETLGLYNRMKSLGL 337
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 310/652 (47%), Gaps = 105/652 (16%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+K GR+ +++ F+R P +NV++WT+ + G+ +NG AL +F ++ESGV PN+
Sbjct: 58 LVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFAC 117
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGF--EKHVSVC----------------------- 222
++ ACA++ R G V L +AGF + + C
Sbjct: 118 NAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS 177
Query: 223 ------NSLITLSLKMGEVDLARSVFDRMEKR---------------------------- 248
SLI+ + GE +LA +M K+
Sbjct: 178 PDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYL 237
Query: 249 ---------DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
V S T ++D + G+ A+ +FD + +N VSW M+ Y + G EE
Sbjct: 238 IKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEE 297
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A ++F M PN SIVL A S+ G +H +K + D+ +SNAL+
Sbjct: 298 ALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLS 354
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+ YG G +EE + + + + + VSW
Sbjct: 355 M----------------------------------YGRTGLVEELEAMLNKIENPDLVSW 380
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+ IS ++ + A+ +M G PN FSSVL + A VASL++G H +K
Sbjct: 381 TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALK 440
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG ++ G AL + Y+K G + S+R FD M + SW ++ G A+ G A +++ +
Sbjct: 441 LGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEV 500
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F +M I P++ T L VL C+HSG+V++G +F M Y+ P HY C++DML
Sbjct: 501 FSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLG 560
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+GR EA IN MPFEPD+ W +LL+ CK ++N I + A L +L++ A YVL
Sbjct: 561 RNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVL 620
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+SNIYA G W DA VR+ M E G++K GCSW+E+ N+VH F + +P
Sbjct: 621 MSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHP 672
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 244/546 (44%), Gaps = 107/546 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V+ +N ++ G L +A LFD MP +N V+WT+++SG+ ++GR E
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPE---------- 96
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
AL +F ++ESGV PN+ ++ ACA++ R G
Sbjct: 97 ---------------------AALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQ 135
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V L +AGF + + LI + + G + A+ VFDRM+ DVV +T ++ F G+
Sbjct: 136 VHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGE 195
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
E++ +I QM + KPN + +L+A
Sbjct: 196 F--------------ELAAEALI-----------------QMLKQGLKPNEHTMTTILTA 224
Query: 326 LASLKALRSGMHVHAHVL-KIGIE-KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ G +H +++ KIG+ + V+ S ALID YS+ GE K + VFDS+ K+
Sbjct: 225 CPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKN-- 278
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VVSW SM+ Y +G++EEA + VF +M+
Sbjct: 279 -VVSWCSMMQLYIRDGRLEEALQ-------------------------------VFGDMI 306
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G PN+ S VL A S+ G+ LH IK D+ + AL Y ++G +E
Sbjct: 307 SEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVE 363
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ +++ + + +SWT + ++G+ +++I L +M TPN SVL +C+
Sbjct: 364 ELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCA 423
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
+D+G++ F+ + +++M S+ G++ A + M D +W
Sbjct: 424 DVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVM-HTHDVTSW 481
Query: 624 ASLLSG 629
SL+ G
Sbjct: 482 NSLIHG 487
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 204/426 (47%), Gaps = 50/426 (11%)
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
E DVV L+ ++ G L +A +FD MP +N V+W+ +++ Y ++G PE A +F
Sbjct: 44 ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFA 103
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M PN + L A A L ALR+G VH+ ++ G D +I + LI++YS+CG
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCG 163
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ AKE+FD M + V ++++IS
Sbjct: 164 ----------------------------------SLPAAKEVFDRMDSPDVVGYTSLISA 189
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGF-P 483
+ + +F+L +ML G PN+ T +++L A V G+ +HG +IK +G
Sbjct: 190 FCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRS 245
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
V+ TAL D Y+++G+ + ++ VFD + KN +SW M++ G +E++ +F +M
Sbjct: 246 QSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDM 305
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ PNE + VL AC GL + + +++ + R ++ M R+G
Sbjct: 306 ISEGVDPNEFALSIVLGACGSIGLG----RQLHCSAIKHDLITDIRVSNALLSMYGRTGL 361
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLS 661
+ E E +N + PD +W + +S ++N E+A+ L ++ E P GY S
Sbjct: 362 VEELEAMLNKIE-NPDLVSWTTAISA--NFQN-GFGEKAIALLCQMHSEGFTPNGYAFSS 417
Query: 662 NIYASA 667
+ + A
Sbjct: 418 VLSSCA 423
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/524 (23%), Positives = 218/524 (41%), Gaps = 107/524 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +H ++ G + ++ + L+ MY A E+ ++ D+V + +I+A +
Sbjct: 133 GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 192
Query: 100 WGNLEEA-----QRLFDGM-PERNEV-------------------------------SWT 122
G E A Q L G+ P + + S T
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSST 252
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI + ++G + + F+ +NV+SW + + ++++G EAL++F ++ GV P
Sbjct: 253 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 312
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NE S + AC I LG + K + V N+L+++ + G V+ ++
Sbjct: 313 NEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAML 369
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+++E D+VS W+ I+ Q+G+ E+A
Sbjct: 370 NKIENPDLVS-------------------------------WTTAISANFQNGFGEKAIA 398
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L QM F PN FS VLS+ A + +L GM H LK+G + ++ NALI++YS
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYS 458
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ RL FD + D V SWNS+I G+ +G +A E
Sbjct: 459 KCGQMGSARLAFDVMHTHD---VTSWNSLIHGHAQHGDANKALE---------------- 499
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLG 481
VF++M +G P+ STF VL +E+G+ +I +
Sbjct: 500 ---------------VFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYS 544
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
F + D ++G + + R+ + MP + + + W ++
Sbjct: 545 FTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLL 588
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 203/466 (43%), Gaps = 68/466 (14%)
Query: 38 IQGRALHGHLIK-TGIHKER-YLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
+ G+ +HG+LIK G+ + Y +T L+ Y + + A + L+ ++V M+
Sbjct: 228 VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQ 287
Query: 96 ANIQWGNLEEAQRLFDGM----PERNEVSWT----------------------------- 122
I+ G LEEA ++F M + NE + +
Sbjct: 288 LYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIR 347
Query: 123 ---ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
AL+S + + G VEE + +++SWT AI QNGF +A+ L ++ G
Sbjct: 348 VSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEG 407
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
PN FSS+ +CA++ G+ L K G + + N+LI + K G++ AR
Sbjct: 408 FTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSAR 467
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSG 295
FD M DV SW ++ + GD +A +F +M + ++ ++ ++ N SG
Sbjct: 468 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 527
Query: 296 YPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
EE FR M +YSF P S ++ ++ L R+G A L++ I F
Sbjct: 528 MVEEGELFFRLMIDQYSFTPAPSHYACMIDMLG-----RNGRFDEA--LRM-INDMPFEP 579
Query: 355 NALI--DLYSKCGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
+ALI L + C ++ G+L D ++E S+ M Y ++G+ E+A+++
Sbjct: 580 DALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRR 639
Query: 410 NM-----PKRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEML 443
M K SW I S + H D ++ + E++
Sbjct: 640 RMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELV 685
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 321/617 (52%), Gaps = 43/617 (6%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGR---VEESMWYFERNPFQNVISWTAAICGFVQ 161
AQ + +G+ S + LIS F G ++ S F + N+ W I G+ +
Sbjct: 29 HAQTIVNGL-HHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSR 87
Query: 162 NGFSFEALKLFLKLLESGVKP-NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ EA+ L++ ++ G+ P N TF + +CA ++ G V I K GFE +
Sbjct: 88 SDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLF 147
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V N+LI L SVF G+L AR +FDE R+
Sbjct: 148 VRNALIHL----------YSVF---------------------GNLNLARTLFDESLVRD 176
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VS++ MI Y + PE A LF +M P+ F + S + L G +HA
Sbjct: 177 LVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHA 236
Query: 341 HVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
V K I+ ++ + +A++D+Y+KCG VF ++ A +W+SM+ GY
Sbjct: 237 QVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSA--AAWSSMVCGYARC 294
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G++ A++LF++M +R+ +SW+A+ISGY + Q +F EM G P++ T +VL
Sbjct: 295 GEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVL 354
Query: 459 CASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD--K 515
A A + + + GK L+ + I+ G F + L A+ D YAK G I+S+ +F R+ K
Sbjct: 355 SACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMK 414
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ M+ GLA+ G + +I +F E+ T + P+E+T + VL AC HSGL+++G K F
Sbjct: 415 TGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLF 474
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
SM Y IKP HY C+VD+L R G L EA D + MPFE +S W +LLS C+T+ N
Sbjct: 475 ESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGN 534
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+I E A + L ++ +H A YVLLSNI A A +W +A VRK+M + G+RK G S++E
Sbjct: 535 VKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIE 594
Query: 696 VRNQVHFFFQKTDHNPK 712
+ +H F +P+
Sbjct: 595 LGGAIHRFVASDKSHPQ 611
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/559 (23%), Positives = 246/559 (44%), Gaps = 84/559 (15%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY--LGSRKSLEANEIV-KD 81
LCLL+ S QG +H I G+H + + +RL+ + LGS+ L+ + ++
Sbjct: 13 LCLLESCKSFK---QGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQ 69
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLF-----DGMPERNEVSWTALI----------- 125
++ +L + N MI + N EA L+ G+ N ++ L+
Sbjct: 70 IDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP 129
Query: 126 -----SGFMKH-------------------GRVEESMWYFERNPFQNVISWTAAICGFVQ 161
S +KH G + + F+ + ++++S+ I G+ +
Sbjct: 130 GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAE 189
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK--AGFEKHV 219
AL LF ++ SG+ P+E TF ++ C+ +N+ +G + ++K + ++
Sbjct: 190 VNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNI 249
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ ++++ + K G +++A VF M + +W+ ++ + G++ AR++F+ M E
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE 309
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
R+ +SW+ MI+ Y+Q+G EA LF++M KP+ VLSA A L A G +
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRL 369
Query: 339 HAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+ ++ G+ ++ ++ A++D+Y+KCG +F V K++ +NSMI G
Sbjct: 370 YHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRR-VGKNMKTGFVFNSMIAGLAQ 428
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+G E A VF E++ +G P++ TF V
Sbjct: 429 HGLGETA-------------------------------ITVFRELISTGLKPDEVTFVGV 457
Query: 458 LCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DK 515
LCA +E+GK L + G + + D + G +E + + +MP +
Sbjct: 458 LCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEA 517
Query: 516 NEISWTVMVRGLAESGYAK 534
N + W ++ G K
Sbjct: 518 NSVIWRALLSACRTHGNVK 536
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 149/350 (42%), Gaps = 47/350 (13%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
M+ + G + A++LF+ M ER+ +SWTA+ISG+ + G+
Sbjct: 287 MVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCS----------------- 329
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
EAL+LF ++ G+KP+EVT ++ ACA + F LG ++ +
Sbjct: 330 --------------EALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIE 375
Query: 213 AG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK--RDVVSWTVILDVFIEMGDLGE- 268
G F ++ + +++ + K G +D A +F R+ K + + ++ + G LGE
Sbjct: 376 NGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHG-LGET 434
Query: 269 ARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVL 323
A +F E+ + +EV++ ++ SG EE +LF M Y KP + ++
Sbjct: 435 AITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMV 494
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
L L + V K+ E + I AL+ G K G + ++E +
Sbjct: 495 DLLGRYGCLEEAYDL---VQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQ 551
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPK---RNDVSWSAIISGYLEHK 430
H + + Q EEA+++ M R WS I G H+
Sbjct: 552 HGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHR 601
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 332/666 (49%), Gaps = 97/666 (14%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
+H LIKTG + LTTR+++ + SR+ A
Sbjct: 9 IHARLIKTGFIQNSNLTTRIVLAFAASRRPYLA--------------------------- 41
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
E A+ +F S HG VE+ PF W A I
Sbjct: 42 -EFARCVFQNYH-----------SCSFAHGEVED--------PFL----WNAVIKSHSHG 77
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
AL F +LE+GV ++ + S + KAC+ + + G+ + G + K G + +
Sbjct: 78 VDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQ 137
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE--RN 280
N LI L LK G + AR +FDRM +RD VS+ ++D +++ G +G AR +FD MP+ +N
Sbjct: 138 NCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKN 197
Query: 281 EVSWSVMIARYNQ-SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+SW+ MI+ Y Q S A +LF +M
Sbjct: 198 LISWNSMISGYAQTSDGVNIASKLFAEMP------------------------------- 226
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
EKD+ N+LID Y K G +D + +F + +DV V+W +MI GY G
Sbjct: 227 --------EKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDV---VTWATMIDGYAKLG 275
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+ +AK LFD MP R+ V+++++++GY+++K +FN M + P+++T VL
Sbjct: 276 FVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVL 335
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A + L K ++ I++ FP LG AL D ++K G I+ + VF+ + +K+
Sbjct: 336 SAIAQLGRLSKAMSMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKSID 395
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W M+ GLA G+ + + ++ ++E+ SI P+++T + VL ACSHSGLV +GL F M
Sbjct: 396 HWNAMIGGLAIHGHGELAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELM 455
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ I+P +HY C+VD+LSRSG + A+ I MP EP+ W + L C+ K +I
Sbjct: 456 RRKHKIEPRLQHYGCIVDILSRSGSIELAKHLIEDMPMEPNDVIWRTFLIACRNRKEFEI 515
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E K+L A +P+ YVLLSN+YAS G W D VR +M ++ L K GCSW+E+
Sbjct: 516 GELVAKHLILQAGYNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWIELDG 575
Query: 699 QVHFFF 704
VH FF
Sbjct: 576 NVHEFF 581
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 287/505 (56%), Gaps = 8/505 (1%)
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L+ K +H+S C +L L+ + D ++S+ + G +
Sbjct: 32 LLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAAL----SPHGSIPY 87
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK-PNTSCFSIVLSALA 327
AR +F + + + + +I Y S P +A + +MT S P+ F ++L A +
Sbjct: 88 ARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACS 147
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+ +LR G +H+HV K+G +V +SN L+ +Y+ CG + LVFD E D A S
Sbjct: 148 EIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGA---S 204
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN MIGGY G + A+ +F+ MP R+ VSWS +I+GY++ +F +F +M+
Sbjct: 205 WNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKI 264
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN+S + L A A + ++E+G+ + + + V LGTAL D Y+K G +E +
Sbjct: 265 EPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALE 324
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF +M +KN ++W+ M+ GLA +G K+++NLF +ME + PNE+T + +L ACSHS L
Sbjct: 325 VFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKL 384
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
VD+G +F+SM IY +KPN H+ C+VD+ R+G L +A+ I SMPF+P+S W +LL
Sbjct: 385 VDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALL 444
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
+ C+ + + ++ E+ K L +L H YVLLSNIYA+ GRW +R++M E+ + K
Sbjct: 445 NACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSK 504
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNPK 712
+ GCS++++ + +H F +P+
Sbjct: 505 TPGCSFIDLGDTIHEFVAGDSSHPQ 529
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 197/424 (46%), Gaps = 38/424 (8%)
Query: 105 EAQRLFDGMPERNEVSWTAL-ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
AQ + G+ N V+ L + HG + + + F R ++ I + +
Sbjct: 55 HAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSP 114
Query: 164 FSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
+A+ + ++ ES V P+ TF + KAC+EI RLG ++ +FK G+ VSV
Sbjct: 115 NPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVS 174
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N L+ + G ++ A VFDR + D SW +++ +++ G ARR+F+ MP+R+ V
Sbjct: 175 NFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVV 234
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SWSVMI Y Q +E LF+ M +PN S LSA A L A+ G + ++
Sbjct: 235 SWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYM 294
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+ + V + ALID+YSKCG + VF + EK+ V++W++MI G +NGQ +
Sbjct: 295 ERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKN---VLAWSAMINGLAINGQGK 351
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
+A L F++M + G PN+ TF +L A +
Sbjct: 352 DALNL-------------------------------FSQMEMQGVKPNEVTFIGILNACS 380
Query: 463 SVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISW 520
+++G H G + + D Y ++G ++ ++ V MP K N W
Sbjct: 381 HSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIW 440
Query: 521 TVMV 524
++
Sbjct: 441 GALL 444
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 168/376 (44%), Gaps = 24/376 (6%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++ V N ++ G +E A +FD PE + SW +I G++K G + + FE P
Sbjct: 170 EVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMP 229
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW+ I G+VQ E L LF ++ ++PNE + ACA + G
Sbjct: 230 DRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQW 289
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + + V + +LI + K G V+ A VF +M++++V++W+ +++ G
Sbjct: 290 IERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQ 349
Query: 266 LGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFS 320
+A +F +M + NEV++ ++ + S +E F MT Y KPN
Sbjct: 350 GKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHC 409
Query: 321 IVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++ R+GM A + + + + I AL++ G+T+ G V ++
Sbjct: 410 CMVDLYG-----RAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLL 464
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN----------DV--SWSAIISGY 426
E D H + + Y G+ + EL M +R D+ + ++G
Sbjct: 465 ELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGD 524
Query: 427 LEHKQFDLVFAVFNEM 442
H Q ++++A EM
Sbjct: 525 SSHPQLEMIYAKLGEM 540
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 284/516 (55%), Gaps = 38/516 (7%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N L+ L K G + AR +FD+M +RDV SW +L + + G++ + R +FD+M + V
Sbjct: 62 NRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAV 121
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
S++ +IA ++ +G +A F +M F+ VL A + L ++ G +H +
Sbjct: 122 SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI 181
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+ + + VF+ NAL ++Y+KCG R +FD +V K+V VSWNSMI GY NGQ E
Sbjct: 182 VATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNV---VSWNSMISGYLQNGQPE 238
Query: 403 EAKELFDNM-----------------------------------PKRNDVSWSAIISGYL 427
+LF M +++ V W+ ++ G
Sbjct: 239 TCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCA 298
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
++ + + +F EMLL P+ T SSV+ + A +ASL +G+ +HGK + G +D+
Sbjct: 299 QNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLL 358
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ +AL D Y+K G+ + VF RM +N ISW M+ G A++G E++ L+EEM +
Sbjct: 359 VSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHEN 418
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ P+ +T + VL AC H+GLV++G YF S+ I+ + P HY+C++++L R+G + +A
Sbjct: 419 LKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKA 478
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
D I SM FEP+ W++LLS C+ + E A ++L++L + Y++LSNIYA+
Sbjct: 479 VDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAAC 538
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
GRW D VR LM ++K SW+E+ NQVH F
Sbjct: 539 GRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKF 574
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/587 (27%), Positives = 269/587 (45%), Gaps = 115/587 (19%)
Query: 60 TRLLIMYLGSRKSLEANEIVK--DLNGF---DLVVHNCMINANIQWGNLEEAQRLFDGMP 114
TRLL+ + S ++A + DL+ + D + N +++ + GNL +A+ LFD M
Sbjct: 26 TRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDKMS 85
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
R+ SW A++S + K G VE+ F++ + +S+ I GF NG S +AL+ F++
Sbjct: 86 RRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVR 145
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ E G + + T S+ AC+++ D + G + G I + V V N+L + K G
Sbjct: 146 MQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGA 205
Query: 235 VDLARSVFDRMEKRDVVSW-----------------------------------TVILDV 259
+D AR +FDRM ++VVSW + IL
Sbjct: 206 LDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA 265
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + G + EA + F E+ E+++V W+ M+ Q+G E+A LFR+M + +P+
Sbjct: 266 YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTI 325
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
S V+S+ A L +L G VH + G++ D+ +S+AL+D+YSKCGET D +VF ++
Sbjct: 326 SSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLT 385
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
++ V+SWNSMI GY NG+ EA A++
Sbjct: 386 RN---VISWNSMILGYAQNGKDLEA-------------------------------LALY 411
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
EML P+ TF VL A +E+G+ G+ Y +
Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQ---------GYFYSI------------- 449
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
I FD ++ M+ L +GY ++++L + M + PN L ++L
Sbjct: 450 SKIHGMNPTFDH--------YSCMINLLGRAGYMDKAVDLIKSM---TFEPNCLIWSTLL 498
Query: 560 FACSHSGLVDKG---LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
C + V+ G ++ ++P +N P Y + ++ + GR
Sbjct: 499 SVCRINCDVNNGEMAARHLFELDP-HNAGP----YIMLSNIYAACGR 540
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 160/305 (52%), Gaps = 14/305 (4%)
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
++A R H+ H+ + D F+ N L+ LY+K G D R +FD + +DV SW
Sbjct: 39 VQAKRLQTHMDLHLYQ---PTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDV---FSW 92
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+M+ Y +G +E+ + +FD M + VS++ +I+G+ + F M G
Sbjct: 93 NAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFE 152
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
T SVL A + + +++GK +HG+I+ VF+ ALT+ YAK G ++ +R +
Sbjct: 153 STDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWL 212
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FDRM +KN +SW M+ G ++G + LF EM+ + + P+++TI ++L A G +
Sbjct: 213 FDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYI 272
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWAS 625
D+ K F ++ + + +T ++ +++G+ +A M E PD+ +S
Sbjct: 273 DEACKTFREIK-----EKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISS 327
Query: 626 LLSGC 630
++S C
Sbjct: 328 VVSSC 332
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 174/403 (43%), Gaps = 54/403 (13%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E F S T + +L + + +G+ +HG ++ T + + ++ L MY
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFM 129
+A + + ++V N MI+ +Q G E +LF M ++V+ + ++S +
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYF 267
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+ G ++E+ F ++ + WT + G QNG +AL LF ++L V+P+ T SS
Sbjct: 268 QCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISS 327
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ +CA + G +V G G + + V ++L+ + K GE A VF RM R+
Sbjct: 328 VVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRN 387
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERN----------------------------- 280
V+SW ++ + + G EA +++EM N
Sbjct: 388 VISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFY 447
Query: 281 EVS-----------WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+S +S MI ++GY ++A L + MT F+PN +S +LS
Sbjct: 448 SISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMT---FEPNCLIWSTLLSVCRIN 504
Query: 330 KALRSGMHVHAHVLKIGIEKD---VFISNALIDLYSKCGETKD 369
+ +G H+ ++ + +SN +Y+ CG KD
Sbjct: 505 CDVNNGEMAARHLFELDPHNAGPYIMLSN----IYAACGRWKD 543
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 325/608 (53%), Gaps = 76/608 (12%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+L+E +R+FD M ++N W ++S + K G +ES+ F+ + +
Sbjct: 10 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFK-----------IMVEKGI 58
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ S A +LF KL + V ++++S+ GL ++ + G + ++
Sbjct: 59 EGKRSESASELFDKLCDRDV----ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLA 114
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLGEARRIFDEM 276
S++ K G + L ++V K R + +LD++ + GDL A R+F++M
Sbjct: 115 TIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 174
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
ERN VSW+ MIA Y + G+ + A L +QM + K + + +L A A +L +G
Sbjct: 175 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 234
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VH ++ + ++F+ NAL+D+Y+KCG
Sbjct: 235 DVHDYIKANNMASNLFVCNALMDMYAKCG------------------------------- 263
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFS 455
ME A +F M ++ +SW+ ++ GE+ P+ T +
Sbjct: 264 ---SMEGANSVFSTMVVKDIISWNTMV----------------------GELKPDSRTMA 298
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+L A AS+++LE+GK++HG I++ G+ D + AL D Y K G + +R +FD +P K
Sbjct: 299 CILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSK 358
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
+ +SWTVM+ G GY E+I F EM I P+E++ +S+L+ACSHSGL+++G ++F
Sbjct: 359 DLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF 418
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
M+ +NI+P HY C+VD+LSR+G LS+A FI ++P PD+ W +LL GC+ Y +
Sbjct: 419 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHD 478
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
++AE+ + +++L E+ YVLL+NIYA A +W + +R+ + +KGLRK+ GCSW+E
Sbjct: 479 IELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIE 538
Query: 696 VRNQVHFF 703
++ +V+ F
Sbjct: 539 IKGRVNLF 546
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 196/472 (41%), Gaps = 117/472 (24%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
M+ I+ E A LFD + +R+ +SW ++IS
Sbjct: 53 MVEKGIEGKRSESASELFDKLCDRDVISWNSMIS-------------------------- 86
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
G+V NG + L ++ +++ G+ + T S+ CA+ LG +V L K
Sbjct: 87 -----GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIK 141
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT------------------ 254
+ FE+ ++ N+L+ + K G++D A VF++M +R+VVSWT
Sbjct: 142 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIIL 201
Query: 255 --------VILDVF---------IEMGDLGEARRIFDEMPERNEVS----WSVMIARYNQ 293
V LDV G L + + D + N S + ++ Y +
Sbjct: 202 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAK 261
Query: 294 SGYPEEAFRLFRQMTRYS----------FKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
G E A +F M KP++ + +L A ASL AL G +H ++L
Sbjct: 262 CGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYIL 321
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
+ G D ++NAL+DLY KCG RL+FD I KD +VSW MI GYG++G E
Sbjct: 322 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD---LVSWTVMIAGYGMHGYGNE 378
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A A FNEM +G P++ +F S+L A +
Sbjct: 379 A-------------------------------IATFNEMRDAGIEPDEVSFISILYACSH 407
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESSRRVFDRMP 513
LE+G I+K F + L + D +++G++ + + + +P
Sbjct: 408 SGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLP 458
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 136/326 (41%), Gaps = 83/326 (25%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ + G+L+ A R+F+ M ERN VSWT++I+
Sbjct: 152 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA------------------------ 187
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
G+ ++G+S A+ L ++ + GVK + V +SI ACA G V I
Sbjct: 188 -------GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV--------------- 255
++ VCN+L+ + K G ++ A SVF M +D++SW
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 300
Query: 256 ----------------------------------ILDVFIEMGDLGEARRIFDEMPERNE 281
++D++++ G LG AR +FD +P ++
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 360
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
VSW+VMIA Y GY EA F +M +P+ F +L A + L G +
Sbjct: 361 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-Y 419
Query: 342 VLK--IGIEKDVFISNALIDLYSKCG 365
++K IE + ++DL S+ G
Sbjct: 420 IMKNDFNIEPKLEHYACMVDLLSRTG 445
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 137/308 (44%), Gaps = 33/308 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY-----LGSRKSLEANEIVKDLNGFDLVVHN-- 91
G+ +H ++ + ++ L+ MY + S+ + +VKD+ ++ +V
Sbjct: 232 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELK 291
Query: 92 -------CMINANIQWGNLEEAQRLFDGMPERNEVS-----WTALISGFMKHGRVEESMW 139
C++ A LE + + G RN S AL+ ++K G + +
Sbjct: 292 PDSRTMACILPACASLSALERGKEIH-GYILRNGYSSDRHVANALVDLYVKCGVLGLARL 350
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ P ++++SWT I G+ +G+ EA+ F ++ ++G++P+EV+F SI AC+
Sbjct: 351 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 410
Query: 200 FRLGLSVFGLIFKAGF--EKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVI 256
G F I K F E + ++ L + G + A + + D W +
Sbjct: 411 LEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 469
Query: 257 L---DVFIEMGDLGE--ARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRY 310
L ++ ++ +L E A R+F+ PE + V++A Y ++ EE R+ ++ +
Sbjct: 470 LCGCRIYHDI-ELAEKVAERVFELEPE--NTGYYVLLANIYAEAEKWEEVKRMREKIGKK 526
Query: 311 SFKPNTSC 318
+ N C
Sbjct: 527 GLRKNPGC 534
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L YA GD++ RRVFD M KN W MV A+ G KESI LF+ M + I
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSM 578
S LF L D+ + +NSM
Sbjct: 62 RSESASELF----DKLCDRDVISWNSM 84
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/587 (33%), Positives = 318/587 (54%), Gaps = 39/587 (6%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-- 179
+ LIS + K G + ++ F + P +N+ SW A + + + + LKLF L+ S
Sbjct: 42 SKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNST 101
Query: 180 -VKPNEVTFSSICKACAEI-NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
VKP+ T + KA A + ++ L V I + G E + V N+LIT + E+ L
Sbjct: 102 DVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVL 161
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR +FD MPER+ VSW+ M+A Y+Q G
Sbjct: 162 ARI-------------------------------MFDRMPERDIVSWNAMLAGYSQGGSY 190
Query: 298 EEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
E+ LFR M + KPN VL A A L G+ VH V + I+ DV + NA
Sbjct: 191 EKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNA 250
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
+I LY+KCG R +F+ ++EKD +++ SMI GY ++G + +A +LF +
Sbjct: 251 VIGLYAKCGSLDYARELFEEMLEKDA---ITYCSMISGYMVHGFVNQAMDLFREQERPRL 307
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
+W+A+ISG +++ + + +F M G PN T +S+L + ++L+ GK++HG
Sbjct: 308 PTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGY 367
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
I+ + ++++ TA+ D+YAK G + ++ VFD++ ++ I+WT ++ A G A +
Sbjct: 368 AIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVA 427
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
++LF EM I P+++T SVL AC+HSG +D+ K FN + P Y I+P HY C+V
Sbjct: 428 LSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVG 487
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+LSR+G+LS+A +FI+ MP EP + W +LL+G + ++ + L+++ E+
Sbjct: 488 VLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGN 547
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YV+++N+Y+ +GRW DA +R LM E L+K G SW+E + F
Sbjct: 548 YVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF 594
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 170/331 (51%), Gaps = 8/331 (2%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ + N +I + G+L+ A+ LF+ M E++ +++ ++ISG+M HG V ++M F
Sbjct: 244 DVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQE 303
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ +W A I G VQN A+ +F + G +PN VT +SI + + + G
Sbjct: 304 RPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKE 363
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + +++++ V ++I K G + A+ VFD+++ R +++WT I+ + GD
Sbjct: 364 IHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGD 423
Query: 266 LGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFR-QMTRYSFKPNTSCFS 320
A +F EM + ++V+++ ++A SG +EA+++F + Y +P ++
Sbjct: 424 ANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYA 483
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ L+ L + + K+ +E + AL++ S G+ + G+ VFD + E
Sbjct: 484 CMVGVLSRAGKLSDAVEF---ISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEI 540
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ + ++ M Y +G+ ++A + D M
Sbjct: 541 EPENTGNYVIMANLYSQSGRWKDADTIRDLM 571
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 17/278 (6%)
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
L+ + G+ RLV S+V + + +I Y +G + +A +F +P++N SW
Sbjct: 17 LFFRVGKQLHARLVLSSVVPDNFLG----SKLISFYSKSGSIRDAYNVFGKIPRKNIFSW 72
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK----GKDLHG 475
+A++ Y H + +F+ ++ S K +V CA ++ASL K++H
Sbjct: 73 NALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHS 132
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
I++ G YD+F+ AL Y++ ++ +R +FDRMP+++ +SW M+ G ++ G ++
Sbjct: 133 FILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEK 192
Query: 536 SINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGL---KYFNSMEPIYNIKPNGRHY 591
LF M + PN LT +SVL AC+ S + G+ ++ N + IK + +
Sbjct: 193 CKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQ----IKMDVSLW 248
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
V+ + ++ G L A + M E D+ + S++SG
Sbjct: 249 NAVIGLYAKCGSLDYARELFEEM-LEKDAITYCSMISG 285
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 213/722 (29%), Positives = 353/722 (48%), Gaps = 129/722 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK S L+ G+ +HG+++K G ++++ L+ MY
Sbjct: 1283 VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMY-------------------- 1322
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
C G LE+A+++FD M E+N
Sbjct: 1323 ---GKC--------GVLEDARKVFDSMVEKN----------------------------- 1342
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
V++W + I G+VQNG + EA+ +F + G++P VT +S A A ++ G
Sbjct: 1343 --VVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEG--- 1397
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
K G +++ NSL DL D + + I++ + ++G +
Sbjct: 1398 -----KQG--HAIAILNSL----------DL-----------DNILGSSIINFYSKVGLI 1429
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A +F M E++ V+W+++I+ Y Q +A + M + + ++ S +LSA
Sbjct: 1430 EDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSAS 1489
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA--- 383
A ++ G H + ++ +E DV ++N++ID+Y+KC D R VFDS E+D+
Sbjct: 1490 AVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWN 1549
Query: 384 -----------------------------HVVSWNSMIGGYGLNGQMEEAKELFDNMP-- 412
+V+SWNS+I G+ NGQ+ EAK++F M
Sbjct: 1550 TLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSL 1609
Query: 413 --KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
+ N ++W+ +ISG + F +M +G P+ ++ +SVL A + SL G
Sbjct: 1610 GFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYG 1669
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ +HG I + F V + T+L D YAK G I+ +++VF M K + M+ A
Sbjct: 1670 RAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALH 1729
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G A E++ LF+ ++K I P+ +T S+L ACSH+GLV++GL F M +N+ P H
Sbjct: 1730 GQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEH 1789
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
Y CVV +LSR G L EA I +MPF+PD++ SLL+ C+ + ++ E K+L+KL
Sbjct: 1790 YGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLE 1849
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+ YV LSN YA+AGRW++ N+R LM +GLRK+ GCSW++ +++ F +
Sbjct: 1850 PSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSH 1909
Query: 711 PK 712
PK
Sbjct: 1910 PK 1911
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 164/605 (27%), Positives = 273/605 (45%), Gaps = 75/605 (12%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDG-MPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
++ C+ + G A+ L +G +NE T L+ + K E ++ F R
Sbjct: 1180 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRV 1239
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NV SW A + + GFS +AL F+++ E+GV P+ ++ KAC + LG V
Sbjct: 1240 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 1299
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + K GF V V +SL+ + K G ++ AR VFD M +++VV+W
Sbjct: 1300 HGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTW------------- 1346
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ MI Y Q+G +EA +F M +P + LSA
Sbjct: 1347 ------------------NSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSAS 1388
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A+L AL G HA + ++ D + +++I+ YSK G +D LVF ++EKD VV
Sbjct: 1389 ANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKD---VV 1445
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+WN +I Y + Q+ +A + M N +FD V
Sbjct: 1446 TWNLLISSYVQHHQVGKALNMCHLMRSEN--------------LRFDSV----------- 1480
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
T SS+L ASA ++++ GK+ H I+ DV + ++ D YAK I+ +R
Sbjct: 1481 ------TLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDAR 1534
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VFD +++ + W ++ A+ G + E++ LF +M+ S+ PN ++ SV+ +G
Sbjct: 1535 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNG 1594
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FEPDSNAW 623
V++ F+ M+ + +PN +T ++ L++SG EA F M P +
Sbjct: 1595 QVNEAKDMFSQMQSL-GFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASI 1653
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAE---EHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
S+L C + RA+ E P L+ ++YA G +A V +M
Sbjct: 1654 TSVLLACTDIPSLWYG-RAIHGFITRHEFCLSVPVATSLV-DMYAKCGSIDEAKKVFHMM 1711
Query: 681 TEKGL 685
+ K L
Sbjct: 1712 SSKEL 1716
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 223/481 (46%), Gaps = 35/481 (7%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ H + I+ + + + ++ MY + +A ++ DLV+ N ++ A Q
Sbjct: 1498 GKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQ 1557
Query: 100 WGNLEEAQRL-----FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP---FQ-NVI 150
G EA +L FD +P N +SW ++I GF+++G+V E+ F + FQ N+I
Sbjct: 1558 VGLSGEALKLFYQMQFDSVPP-NVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLI 1616
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+WT I G Q+GF +EA+ F K+ E+G++P+ + +S+ AC +I G ++ G I
Sbjct: 1617 TWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFI 1676
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ F V V SL+ + K G +D A+ VF M +++ + ++ + G EA
Sbjct: 1677 TRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEAL 1736
Query: 271 RIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSA 325
+F + E + ++++ +++ + +G E LF M ++++ P + V+S
Sbjct: 1737 ALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSL 1796
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L+ L + + +L + + D I +L+ + E + G + + + + ++
Sbjct: 1797 LSRCGNLDEALRL---ILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNS 1853
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSW-------SAIISGYLEHKQFD 433
++ ++ Y G+ E + D M R SW + ++G H + +
Sbjct: 1854 GNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTE 1913
Query: 434 LVFA----VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
++A + +EM G +P S + LC+ A + +L IK+ + +F+
Sbjct: 1914 EIYAMLAMLLSEMRFMGYVPIASNEEN-LCSRAQKLLCKYAVELEHTPIKISWLELLFIS 1972
Query: 490 T 490
+
Sbjct: 1973 S 1973
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 38/343 (11%)
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG- 346
I+ + G+ +E+ L +M F+ + +L +AL +G +HA +LK G
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205
Query: 347 -IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
K+ ++ L+ Y+KC D V A
Sbjct: 1206 FFAKNEYVETKLVVFYAKC----------------DFPEV------------------AV 1231
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
LF + RN SW+AI+ + F EM +G P+ +VL A S+
Sbjct: 1232 RLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQ 1291
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+ GK +HG ++K+GF VF+ ++L D Y K G +E +R+VFD M +KN ++W M+
Sbjct: 1292 LIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIV 1351
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
G ++G +E+I++F +M I P +T+ S L A ++ + +G K +++ + ++
Sbjct: 1352 GYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEG-KQGHAIAILNSLD 1410
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ + +++ S+ G + +AE + M E D W L+S
Sbjct: 1411 LDNILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLIS 1452
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 198/625 (31%), Positives = 325/625 (52%), Gaps = 73/625 (11%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVS----WTALISGFMKHGRVEESMWYFE--RN 144
N ++N IQ +L+ A ++ + N S + LI+ + K G + +++ F +
Sbjct: 146 NHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHH 205
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
F+ +++WT+ I +AL LF ++ SG PN+ TFSSI A A G
Sbjct: 206 HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ LI K GF+ ++ V +L+ D++ +
Sbjct: 266 QLHSLIHKHGFDANIFVGTALV-------------------------------DMYAKCA 294
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
D+ A R+FD+MPERN VSW+ MI + + + A +F+ + R + PN S VL
Sbjct: 295 DMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVL 354
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA A++ L G VH V+K G+ ++ N+L+D+Y KC +G +F + ++DV
Sbjct: 355 SACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDV- 413
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V+W+ ++ G++++ +F+ F M
Sbjct: 414 ---------------------------------VTWNVLVMGFVQNDKFEEACNYFWVMR 440
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G +P++++FS+VL +SAS+A+L +G +H +IIKLG+ ++ + +L YAK G +
Sbjct: 441 REGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLV 500
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ +VF+ + D N ISWT M+ G A + I LFE M I P+ +T + VL ACS
Sbjct: 501 DAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACS 560
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+G V++GL +FNSM+ I+++ P HY C+VD+L R+G L EA+ FI SMP +P + W
Sbjct: 561 HTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVW 620
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL C+ Y N ++ A + L+++ +P YVLL+N+ +GR +A VR+LM
Sbjct: 621 GALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVN 680
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTD 708
G+RK GCSW++V+N F F D
Sbjct: 681 GVRKEPGCSWIDVKNMT-FVFTAHD 704
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 154/622 (24%), Positives = 250/622 (40%), Gaps = 145/622 (23%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LFSI F + I T L+ ++ N+ +Q +L + +G + ++ + +L
Sbjct: 199 LFSIT-HHHFKT-IVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASA 256
Query: 68 GSRKSLEANEI--VKDLNGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
+ L ++ + +GFD + V +++ + ++ A R+FD MPERN VSW +
Sbjct: 257 ATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNS 316
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKP 182
+I GF F N + A+ +F +L E V P
Sbjct: 317 MIVGF------------FHNNLYD-------------------RAVGVFKDVLREKTVIP 345
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NEV+ SS+ ACA + G V G++ K G V NSL+ + K D +F
Sbjct: 346 NEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLF 405
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ RDVV+W V++ F+ Q+ EEA
Sbjct: 406 QCVGDRDVVTWNVLVMGFV-------------------------------QNDKFEEACN 434
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F M R P+ + FS VL + ASL AL G +H ++K+G K++ I +LI +Y+
Sbjct: 435 YFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYA 494
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG D VF+ I + + V+SW +MI Y L+G + ELF++
Sbjct: 495 KCGSLVDAYQVFEGIEDHN---VISWTAMISAYQLHGCANQVIELFEH------------ 539
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
ML G P+ TF VL A + +E+G
Sbjct: 540 -------------------MLSEGIEPSHVTFVCVLSACSHTGRVEEGL----------- 569
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
S +++ D P + MV L +G+ E+ E
Sbjct: 570 -----------------AHFNSMKKIHDMNPGPEH--YACMVDLLGRAGWLDEAKRFIES 610
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP-NGRHYTCVVDMLSRS 601
M + P ++L AC G + G + + E ++ ++P N +Y + +M +RS
Sbjct: 611 M---PMKPTPSVWGALLGACRKYGNLKMGRE---AAERLFEMEPYNPGNYVLLANMCTRS 664
Query: 602 GRLSEAEDF-----INSMPFEP 618
GRL EA + +N + EP
Sbjct: 665 GRLEEANEVRRLMGVNGVRKEP 686
>gi|224080297|ref|XP_002306087.1| predicted protein [Populus trichocarpa]
gi|222849051|gb|EEE86598.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 200/640 (31%), Positives = 344/640 (53%), Gaps = 27/640 (4%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
L +N++V L +C+IN EAQ+LFD MP+RN SW +IS +K
Sbjct: 24 LTSNQLVH------LYSKHCLIN---------EAQKLFDEMPQRNTYSWNTIISAHIKSQ 68
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQ-NGFSFEALKLFLKLL--ESGVKPNEVTFSS 189
+ ++ F+ ++++++ + + G+V +G+ AL+LF+++ + ++ +++T +S
Sbjct: 69 NLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSKRNEIEIDDLTITS 128
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR- 248
+ +++ + G + + K G ++ V +SLI + K G A VF E+
Sbjct: 129 MVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEACQVFKGCEREG 188
Query: 249 --DVVSWTVILDVFIEMGDLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFR 305
D+VS ++ + GD+ A R+F E N+ VSW+ +I+ Y Q+GYP EA +LF
Sbjct: 189 GFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGYPVEALKLFV 248
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M K N F VLSA A L+ L+ G +HA +LK G+ F+ + ++D+Y KCG
Sbjct: 249 CMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCG 308
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
K + + + V S SMI GY G M EA LFD++ ++N + W+A+ SG
Sbjct: 309 NMKYAESLH---LTRGVRSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFSG 365
Query: 426 YLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
Y++ KQ + F + E + IP+ + A A+L GK +HG + ++G
Sbjct: 366 YVKLKQCEAFFELLREYIAKEAAIPDALILINAFNVCAFQAALGPGKQIHGYVFRMGIEM 425
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D+ TA+ D Y+K G I + ++F ++ +++ + + VM+ G A G+ ++INLF+EM
Sbjct: 426 DMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVLYNVMLAGYAHHGHEIKAINLFQEML 485
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + P+ +T +++L AC H GLVD G K F SM Y+I P HY C++D+ R+ +L
Sbjct: 486 ERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMIDLYGRASQL 545
Query: 605 SEAEDFINSMPFE-PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
+ F+ +P E D+ + + C+ N ++A+ A + L + + A YV L+N+
Sbjct: 546 EKMVLFMQRIPVEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSGARYVQLANV 605
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YA+ G W + + + M K +K GCSWV + N+VH F
Sbjct: 606 YAAEGNWAEMGRISREMRGKEAKKFAGCSWVYLDNEVHSF 645
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 205/433 (47%), Gaps = 37/433 (8%)
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K+GF + N L+ L K ++ A+ +FD M +R+ SW I+ I+ +L +A+
Sbjct: 16 KSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIISAHIKSQNLAQAKS 75
Query: 272 IFDEMPERNEVSWSVMIARY-NQSGYPEEAFRLFRQMT--RYSFKPNTSCFSIVLSALAS 328
IFD R+ V+++ M++ Y + GY A LF +M R + + + +++ +
Sbjct: 76 IFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSKRNEIEIDDLTITSMVNLFSK 135
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L G +H++++K G ++ F+ ++LID+YSKCG K+ VF + +VS
Sbjct: 136 LCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEACQVFKGCEREGGFDLVSK 195
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
N+M+ Y G ME A LF + ND VSW+ +ISGY+++ +F M +G
Sbjct: 196 NAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGYPVEALKLFVCMGENGV 255
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR- 506
N+ TF SVL A A + +L+ GK++H I+K G F+ + + D Y K G+++ +
Sbjct: 256 KWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMKYAES 315
Query: 507 ------------------------------RVFDRMPDKNEISWTVMVRGLAESGYAKES 536
R+FD + +KN I W + G + +
Sbjct: 316 LHLTRGVRSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVKLKQCEAF 375
Query: 537 INLFEE-MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
L E + K + P+ L +++ C+ + G K + I+ + + T ++
Sbjct: 376 FELLREYIAKEAAIPDALILINAFNVCAFQAALGPG-KQIHGYVFRMGIEMDMKTTTAMI 434
Query: 596 DMLSRSGRLSEAE 608
DM S+ G + AE
Sbjct: 435 DMYSKCGSIPYAE 447
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 164/370 (44%), Gaps = 74/370 (20%)
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+++L+ G+ H +K G + SN L+ LYSK + + +FD + +++ SW
Sbjct: 1 MRSLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRN---TYSW 57
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLS-G 446
N++I + + + +AK +FD+ R+ V++++++SGY+ ++ +F EM
Sbjct: 58 NTIISAHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSKRN 117
Query: 447 EIP-NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK------- 498
EI + T +S++ + + + G+ LH ++K G F+ ++L D Y+K
Sbjct: 118 EIEIDDLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCFKEA 177
Query: 499 ---------------------------SGDIESSRRVFDRMPDKNE-ISWTVMVRGLAES 530
GD+E + R+F R + N+ +SW ++ G ++
Sbjct: 178 CQVFKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQN 237
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACS--------------------------H 564
GY E++ LF M + + NE T SVL AC+
Sbjct: 238 GYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVE 297
Query: 565 SGLVD-----KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
SG+VD +KY S+ ++ + + +V S G + EA +S+ E +
Sbjct: 298 SGIVDVYCKCGNMKYAESLHLTRGVRSSFSITSMIVG-YSSQGNMVEACRLFDSLE-EKN 355
Query: 620 SNAWASLLSG 629
S WA+L SG
Sbjct: 356 SIVWAALFSG 365
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 48/318 (15%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL--GSRK 71
E +F S + C L +NL I G+ +H ++K G+ ++ + ++ +Y G+ K
Sbjct: 259 EHTFGSVLSACADL------RNLKI-GKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMK 311
Query: 72 SLEANEIVKDL-NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
E+ + + + + F + MI GN+ EA RLFD + E+N + W AL SG++K
Sbjct: 312 YAESLHLTRGVRSSFSIT---SMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVK 368
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+ E +FE + I+ AAI P+ + +
Sbjct: 369 LKQCEA---FFE--LLREYIAKEAAI-------------------------PDALILINA 398
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
CA G + G +F+ G E + ++I + K G + A +F ++ +RD+
Sbjct: 399 FNVCAFQAALGPGKQIHGYVFRMGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDL 458
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQ 306
V + V+L + G +A +F EM ER + V++ +++ G + + F
Sbjct: 459 VLYNVMLAGYAHHGHEIKAINLFQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYS 518
Query: 307 MTR-YSFKPNTSCFSIVL 323
MT Y P T ++ ++
Sbjct: 519 MTEDYHILPETDHYACMI 536
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 37/256 (14%)
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV- 524
SL+ G H + IK GF + L Y+K I ++++FD MP +N SW ++
Sbjct: 3 SLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIIS 62
Query: 525 -----RGLAES--------------------------GYAKESINLFEEME--KTSITPN 551
+ LA++ GY + ++ LF EM+ + I +
Sbjct: 63 AHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSKRNEIEID 122
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+LTI S++ S G + + M N + +G + ++DM S+ G EA
Sbjct: 123 DLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDR-SGFVVSSLIDMYSKCGCFKEACQVF 181
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EHPAGYVLLSNIYASAGRW 670
E + S + Y E E A++ W+ +E + L + Y G
Sbjct: 182 KGCEREGGFD-LVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGYP 240
Query: 671 IDAMNVRKLMTEKGLR 686
++A+ + M E G++
Sbjct: 241 VEALKLFVCMGENGVK 256
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 206/717 (28%), Positives = 332/717 (46%), Gaps = 128/717 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T L QGR++H K G E ++ L+ +YL A + D+ D
Sbjct: 149 VLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRD 208
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISG--------------- 127
V N +I+ + Q + E A +F+ M + V+ ++L++
Sbjct: 209 TVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 128 --------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
++K G VE ++ F NV+ W + F Q +
Sbjct: 269 YLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAK 328
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+ +LF ++ +G++PN+ T+ I + C + LG + L K GFE + V LI
Sbjct: 329 SFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLID 388
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K G ++ AR V + ++++DVVSWT M
Sbjct: 389 MYSKYGWLEKARRVLEMLKEKDVVSWT-------------------------------SM 417
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y Q Y ++A F++M + P+ + +S A +KA+R G+ +HA V G
Sbjct: 418 IAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGY 477
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV I NAL++LY++CG ++ F+ I KD ++WN ++ G+ +G EEA ++
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKD---EITWNGLVSGFAQSGLHEEALKV 534
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F M + SG N TF S L ASA++A +
Sbjct: 535 FMRMDQ-------------------------------SGVKHNVFTFVSALSASANLAEI 563
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
++GK +H ++IK G ++ +G AL Y K G E ++ F M ++NE+SW ++
Sbjct: 564 KQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSC 623
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
++ G E+++ F++M+K +GL YF SM Y I+P
Sbjct: 624 SQHGRGLEALDFFDQMKK------------------------EGLSYFKSMSDKYGIRPR 659
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY CV+D+ R+G+L A+ F+ MP D+ W +LLS CK +KN ++ E A K+L
Sbjct: 660 PDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLL 719
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+L A YVLLSN YA G+W + VRK+M ++G+RK G SW+EV+N VH FF
Sbjct: 720 ELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFF 776
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 143/579 (24%), Positives = 262/579 (45%), Gaps = 102/579 (17%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
+ A I + L G D +V N +I+ + G + A+R+F+ + R+ VSW A++SG+ ++G
Sbjct: 64 IHAKAITRGL-GKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
EE++W L+ ++ +GV P SS+
Sbjct: 123 LGEEALW-------------------------------LYRQMHRAGVVPTPYVLSSVLS 151
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
+C + F G SV +K GF V N+LITL L+ G LA VF M RD
Sbjct: 152 SCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDT-- 209
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
V+++ +I+ + Q + E A +F +M
Sbjct: 210 -----------------------------VTFNTLISGHAQCAHGEHALEIFEEMQSSGL 240
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
P+ S +L+A ASL L+ G +H+++ K G+ D + +L+DLY KCG+ + +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALV 300
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+F+ + +VV WN ++ +G + ND++ S
Sbjct: 301 IFNL---GNRTNVVLWNLILVAFG----------------QINDLAKS------------ 329
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
F +F +M +G PN+ T+ +L ++ G+ +H +K GF D+++ L
Sbjct: 330 ---FELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVL 386
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D Y+K G +E +RRV + + +K+ +SWT M+ G + Y K+++ F+EM+K I P+
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDN 446
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+ + S + C+ + +GL+ ++ + + + +V++ +R GR+ EA
Sbjct: 447 IGLASAISGCAGIKAMRQGLQ-IHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFE 505
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+ + D W L+SG + + E A+K ++ +
Sbjct: 506 EIEHK-DEITWNGLVSG---FAQSGLHEEALKVFMRMDQ 540
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 201/427 (47%), Gaps = 39/427 (9%)
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
+D + +++D++ + G + ARR+F+E+ R+ VSW M++ Y Q+G EEA L+RQM
Sbjct: 75 KDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQM 134
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
R P S VLS+ + G VHA K G + F+ NALI LY +CG
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSF 194
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
+ A+ +F +MP R+ V+++ +ISG+
Sbjct: 195 R----------------------------------LAERVFYDMPHRDTVTFNTLISGHA 220
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+ + +F EM SG P+ T SS+L A AS+ L+KG LH + K G D
Sbjct: 221 QCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYI 280
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ +L D Y K GD+E++ +F+ N + W +++ + +S LF +M+
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAG 340
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
I PN+ T +L C+ +G +D G + +S+ + + ++DM S+ G L +A
Sbjct: 341 IRPNQFTYPCILRTCTCTGEIDLG-EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
+ M E D +W S+++G ++ + A A K + K P L S I A
Sbjct: 400 RRVLE-MLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCG-IWPDNIGLASAISGCA 457
Query: 668 GRWIDAM 674
G I AM
Sbjct: 458 G--IKAM 462
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 58/100 (58%)
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H K I G D +G L D Y+K+G + +RRVF+ + ++ +SW M+ G A++G
Sbjct: 63 EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+E++ L+ +M + + P + SVL +C+ + L +G
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 301/564 (53%), Gaps = 45/564 (7%)
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
++W I + +G +L F L G+ P+ F S+ +A F L S+
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ + GF + N+L+ + K F + ++V +D
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKID---------SV 152
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R++FD MP R+ VSW+ +IA Q+G EEA + ++M + + +P++ S +L
Sbjct: 153 RKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEH 212
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ G +H + ++ G +KDVFI ++LID+Y+KC
Sbjct: 213 ANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCT------------------------ 248
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
Q+E + F + R+ +SW++II+G +++ +FD F ML P
Sbjct: 249 ----------QVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKP 298
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ +FSSV+ A A + +L GK LH II+LGF + F+ ++L D YAK G+I+ +R +F
Sbjct: 299 MQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIF 358
Query: 510 DR--MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
++ M D++ +SWT ++ G A G+A ++++LFEEM + P + ++VL ACSH+GL
Sbjct: 359 NKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGL 418
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
VD+G KYFNSM+ + + P HY V D+L R+GRL EA DFI++M EP + W++LL
Sbjct: 419 VDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLL 478
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
+ C+ +KN ++AE+ V + + + +V++SNIY++A RW DA +R M + GL+K
Sbjct: 479 AACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKK 538
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNP 711
+ CSW+EV N+VH F +P
Sbjct: 539 TPACSWIEVGNKVHTFLAGDKSHP 562
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 199/461 (43%), Gaps = 56/461 (12%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL-----IMYLGSRKSLEANEIV 79
+C++K S L+ A L GI +R+L LL + +SL A I
Sbjct: 45 ICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIR 104
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ FDL N ++N ++ F + ++ I K
Sbjct: 105 LGFH-FDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRK--------- 154
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+R P ++V+SW I G QNG EAL + ++ + ++P+ T SSI E +
Sbjct: 155 LFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHAN 214
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G + G + GF+K V + +SLI + K +V+L+ F + RD +SW I
Sbjct: 215 VTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSI--- 271
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
IA Q+G ++ FR+M + KP F
Sbjct: 272 ----------------------------IAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSF 303
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-- 377
S V+ A A L AL G +HA+++++G + + FI+++L+D+Y+KCG K R +F+ I
Sbjct: 304 SSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEM 363
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFD 433
++D +VSW ++I G ++G +A LF+ M K V++ A+++ D
Sbjct: 364 CDRD---MVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVD 420
Query: 434 LVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDL 473
+ FN M G P +++V LE+ D
Sbjct: 421 EGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDF 461
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 339/666 (50%), Gaps = 97/666 (14%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
+HG LIKTGI K LTTR+++ + SR+ A
Sbjct: 24 IHGGLIKTGIIKNSNLTTRIVLAFAASRRPYLA--------------------------- 56
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
E A+ +F E + S++ G +E+ PF W A I
Sbjct: 57 -EFARCVFH---EYHVCSFSP--------GEMED--------PFL----WNAVIKSHSHG 92
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
+AL LF +LE+GV ++ + S + KAC+ + + G+ + G + K G + +
Sbjct: 93 KDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLRKTGLWSDLFLQ 152
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE--RN 280
N LI L LK G + AR +FDRM +RD VS+ +++ +++ G + AR +FD MP +N
Sbjct: 153 NCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLIESARELFDLMPREMKN 212
Query: 281 EVSWSVMIARYNQSGYPEE-AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+SW+ MI+ Y Q+ A +LF +M
Sbjct: 213 LISWNSMISGYAQTSEGVNIASKLFAEMP------------------------------- 241
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
EKD+ N++ID Y K G +D + +FD + +DV V+ +MI GY G
Sbjct: 242 --------EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV---VTCATMIDGYAKLG 290
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+ +AK LFD MP R+ V+++++++GY+++K +FN+M + P+++T +L
Sbjct: 291 FVHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIIL 350
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A + L K D+H I++ F LG AL D Y+K G I+ + VF+ + +K+
Sbjct: 351 SAIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID 410
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W M+ GLA G + + N+ ++E+ SI P+++T + VL ACSHSGLV +GL F M
Sbjct: 411 HWNAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELM 470
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ I+P +HY C+VD+LSRSG + A++ I MP EP+ W + L+ C +K +
Sbjct: 471 RRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFET 530
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E K+L A +P+ YVLLSN+YAS G W D VR +M E+ + K GCSW+E+
Sbjct: 531 GELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDG 590
Query: 699 QVHFFF 704
+VH FF
Sbjct: 591 RVHEFF 596
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 228/553 (41%), Gaps = 163/553 (29%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V G +HG L KTG+ D
Sbjct: 120 VLKACSRLGFVKGGMQIHGFLRKTGLWS-------------------------------D 148
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP- 145
L + NC+I ++ G L A+++FD MP+R+ VS+ ++I+G++K G +E + F+ P
Sbjct: 149 LFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLIESARELFDLMPR 208
Query: 146 -FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+N+ISW + I G+ Q E + + KL + + ++++S+ +
Sbjct: 209 EMKNLISWNSMISGYAQTS---EGVNIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAK 265
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+F ++ + + V C ++I K+G V A+++FD+M RDVV++ ++ +++
Sbjct: 266 GLFDVMPR----RDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNSMMAGYVQNK 321
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
EA IF++M + + +S P+ + I+LS
Sbjct: 322 CHMEALEIFNDMEKESHLS------------------------------PDETTLVIILS 351
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISN----ALIDLYSKCGETKDGRLVFDSIVEK 380
A+A L L +H ++ +EK ++ ALID+YSKCG + LVF+ I K
Sbjct: 352 AIAQLGRLSKATDMHLYI----VEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 407
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ H WN+MIGG ++G E A FN
Sbjct: 408 SIDH---WNAMIGGLAVHGLGESA----------------------------------FN 430
Query: 441 EMLLSGE----IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
MLL E IP+ TF VL A + H ++K G
Sbjct: 431 -MLLQIERLSIIPDDITFVGVLNACS-----------HSGLVKEGL-------------- 464
Query: 497 AKSGDIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
F+ M K++I + MV L+ SG + + NL EEM I PN
Sbjct: 465 ----------LCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM---PIEPN 511
Query: 552 ELTILSVLFACSH 564
++ + L ACSH
Sbjct: 512 DVIWRTFLTACSH 524
>gi|125570503|gb|EAZ12018.1| hypothetical protein OsJ_01900 [Oryza sativa Japonica Group]
Length = 657
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 311/597 (52%), Gaps = 12/597 (2%)
Query: 106 AQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
A LFD +P R+ + L+S + GR+E + P ++ +S+T I ++G
Sbjct: 62 AYHLFDEIPPLLRDATAQNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSG 121
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSI--CKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
AL +F +L V+PNEVT + + AC +G + G+ + G + V V
Sbjct: 122 HPERALAVFRDMLTEAVQPNEVTLAEVLTAMACDHGAPAPVG-AAHGVAVRRGLDGFVIV 180
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
+L+ + +V ARS+F+ M R+ V+W +L+ +++ G + A +F +PER+E
Sbjct: 181 ATNLVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERDE 240
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW MI Y + + +A R + M + N ++ A + A+ G +H
Sbjct: 241 VSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHT 300
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+LK G + F+ LI Y C ++ F D +HV SWN+++
Sbjct: 301 VILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFK---LSDKSHVASWNALMASLLRRNL 357
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ EA++LFD+MP+R+ +SWS +ISGY++ ++ +F ML +G PN+ T +S L A
Sbjct: 358 VHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSA 417
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN-EIS 519
A+ +L + + +H II L L + YAK G I + ++F+ + DK+ +S
Sbjct: 418 VANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVKDKSISVS 477
Query: 520 -WTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNS 577
W ++ LA GY S+ LF +++ T+ I PN +T L VL AC H+G+V +G + F S
Sbjct: 478 PWNSIICNLAIHGYVNMSLELFSQLQSTTHIKPNSITYLGVLNACCHAGMVAEGKRQFES 537
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M Y I+P +HY C+VD+L R+G L EAE I +MP + D AW +L+ +T N
Sbjct: 538 MRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVA 597
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+ E+A + L KL H A + LSN+YA AG W + VRK + + L + G S +
Sbjct: 598 LGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRKELQNENLERLTGSSGI 654
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 216/469 (46%), Gaps = 35/469 (7%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ L+GF +V N +++A + A+ +F+ MP+RN V+W +++ ++K G + +
Sbjct: 172 RGLDGFVIVATN-LVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAE 230
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEIN 198
F P ++ +SW I G++ F +AL+ ++ ++ + G++ NEV + KAC+ +
Sbjct: 231 VFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHS 290
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + +I K GF+ H V +LI +D A+ F +K V SW ++
Sbjct: 291 AVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFKLSDKSHVASWNALMA 350
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ + EAR++FD+MPER+ +SWS +I+ Y QSG A ++F M +PN
Sbjct: 351 SLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEIT 410
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ LSA+A+ L +H +++ I+ +S LI++Y+KCG + +F+ +
Sbjct: 411 LASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVK 470
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+K ++ V WNS+I ++G + + ELF + +
Sbjct: 471 DKSIS-VSPWNSIICNLAIHGYVNMSLELFSQLQSTTHIK-------------------- 509
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGK-DLHGKIIKLGFPYDVFLGTALTDTYA 497
PN T+ VL A + +GK + G ++ + D
Sbjct: 510 ----------PNSITYLGVLNACCHAGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLC 559
Query: 498 KSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAESGYAKESINLFEEMEK 545
++G +E + + MP K + ++W ++ G EE+ K
Sbjct: 560 RAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVALGEKAAEELSK 608
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 197/612 (32%), Positives = 313/612 (51%), Gaps = 84/612 (13%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
I+ + G++ E+ F+ +++ SW + + G+ N +A KLF ++ +
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD------- 76
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
+++ N L++ +K GE+D AR VFD
Sbjct: 77 --------------------------------RNIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M +R+VVSWT ++ ++ G + A +F +MPE+N+VSW+VM+ + Q G ++A +L+
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
+ TS ++ L + + + E+ V ++ Y +
Sbjct: 165 EMIPDKDNIARTS----MIHGLCKEGRVDEAREIFDEMS----ERSVITWTTMVTGYGQN 216
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP------------ 412
D R +FD + EK VSW SM+ GY NG++E+A+ELF+ MP
Sbjct: 217 NRVDDARKIFDVMPEKTE---VSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMIS 273
Query: 413 -------------------KRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLSGEIPNKS 452
+RND SW +I + E F+L +F M G P
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIH-ERNGFELEALDLFILMQKQGVRPTFP 332
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T S+L AS+ASL GK +H ++++ F DV++ + L Y K G++ S+ +FDR
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTILSVLFACSHSGLVDKG 571
P K+ I W ++ G A G +E++ +F EM + S PNE+T ++ L ACS++G+V++G
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
LK + SME ++ +KP HY C+VDML R+GR +EA + I+SM EPD+ W SLL C+
Sbjct: 453 LKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACR 512
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
T+ +AE K L ++ E+ Y+LLSN+YAS GRW D +RKLM + +RKS GC
Sbjct: 513 THSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGC 572
Query: 692 SWVEVRNQVHFF 703
SW EV N+VH F
Sbjct: 573 SWTEVENKVHAF 584
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 204/396 (51%), Gaps = 47/396 (11%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + +A ++ ++ +++ N +++ ++ G ++EA+++FD MPERN VSWTAL+
Sbjct: 58 YFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALV 117
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G++ +G+V+ + F + P +N +SWT + GF+Q+G +A KL+ + +
Sbjct: 118 KGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS 177
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+CK +++ R IF E+ V +++T + VD AR +FD M
Sbjct: 178 MIHGLCKE-GRVDEAR-------EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 246 EKRDVVSWTVILDVFI-------------------------------EMGDLGEARRIFD 274
++ VSWT +L ++ + G++ +ARR+FD
Sbjct: 230 PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFD 289
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
M ERN+ SW +I + ++G+ EA LF M + +P +LS ASL +L
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VHA +++ + DV++++ L+ +Y KCGE +L+FD KD ++ WNS+I G
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD---IIMWNSIISG 406
Query: 395 YGLNGQMEEAKELFDNMP-----KRNDVSWSAIISG 425
Y +G EEA ++F MP K N+V++ A +S
Sbjct: 407 YASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 209/453 (46%), Gaps = 86/453 (18%)
Query: 223 NSLITLSLKMGEVDLA-------------------------------RSVFDRMEKRDVV 251
N IT ++G++ A R +FD M R+++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW ++ +++ G++ EAR++FD MPERN VSW+ ++ Y +G + A LF +M
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP--- 137
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ N ++++L + ++ + +KD ++I K G + R
Sbjct: 138 -EKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+FD + E+ V++W +M+ GYG N ++++A+++FD MP++ +VSW++++ GY+++ +
Sbjct: 193 EIFDEMSERS---VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR 249
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+ +F M P K V+ +A ++ L
Sbjct: 250 IEDAEELFEVM------PVK----PVIACNAMISGL------------------------ 275
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
+ G+I +RRVFD M ++N+ SW +++ +G+ E+++LF M+K + P
Sbjct: 276 -----GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
T++S+L C+ + G K ++ + + ++ M + G L +++
Sbjct: 331 FPTLISILSVCASLASLHHG-KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ P + D W S++SG Y + + E A+K
Sbjct: 390 DRFPSK-DIIMWNSIISG---YASHGLGEEALK 418
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 156/322 (48%), Gaps = 40/322 (12%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
EA EI +++ ++ M+ Q +++A+++FD MPE+ EVSWT+++ G++++GR
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR 249
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQ-------------------------------N 162
+E++ FE P + VI+ A I G Q N
Sbjct: 250 IEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
GF EAL LF+ + + GV+P T SI CA + G V + + F+ V V
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----- 277
+ L+T+ +K GE+ ++ +FDR +D++ W I+ + G EA ++F EMP
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGST 429
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGM 336
+ NEV++ ++ + +G EE +++ M + + KP T+ ++ ++ L M
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 337 HVHAHVLKIGIEKDVFISNALI 358
+ + + +E D + +L+
Sbjct: 490 EM---IDSMTVEPDAAVWGSLL 508
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 188/385 (48%), Gaps = 47/385 (12%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T +LI +L + +A ++ + + D + MI+ + G ++EA+ +FD M ER+ +
Sbjct: 145 TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI 204
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF------- 172
+WT +++G+ ++ RV+++ F+ P + +SWT+ + G+VQNG +A +LF
Sbjct: 205 TWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP 264
Query: 173 --------------------LKLLESGVKPNEVTFSSICKACAEINDFRL-GLSVFGLIF 211
++ +S + N+ ++ ++ K E N F L L +F L+
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI-HERNGFELEALDLFILMQ 323
Query: 212 KAGFEKH-------VSVCNSLITLSL-KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
K G +SVC SL +L K L R FD DV +V++ ++I+
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD----VDVYVASVLMTMYIKC 379
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIV 322
G+L +++ IFD P ++ + W+ +I+ Y G EEA ++F +M S KPN F
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEK 380
LSA + + G+ ++ + + G++ ++D+ + G + + DS+ VE
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAK 405
D A W S++G + Q++ A+
Sbjct: 500 DAA---VWGSLLGACRTHSQLDVAE 521
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF + + T + +L S + G+ +H L++ + Y+ + L+ MY+
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP-----ERNEVSWT 122
+ +++ I D+++ N +I+ G EEA ++F MP + NEV++
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 123 ALISGFMKHGRVEESMWYFERNP----FQNVISWTAAICGFVQNGFSF-EALKLFLKLLE 177
A +S G VEE + +E + + + A + + F EA+++ +
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT- 496
Query: 178 SGVKPNEVTFSSICKAC 194
V+P+ + S+ AC
Sbjct: 497 --VEPDAAVWGSLLGAC 511
>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 195/665 (29%), Positives = 348/665 (52%), Gaps = 76/665 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T L+S + K G ++E+ F+ +N+ +W+A I ++ E ++LF +++ GV
Sbjct: 122 TKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVL 181
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P++ + KAC + D G + L+ + G + V NS++ + K GE+ A +
Sbjct: 182 PDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKI 241
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE----VSWSVMIARYNQSGYP 297
F RM++R+ VSW VI+ + + G++ +A++ FD M E V+W+++IA Y+Q G+
Sbjct: 242 FRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHC 301
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALAS----------------------------- 328
+ A L R+M + P+ ++ ++S
Sbjct: 302 DIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASA 361
Query: 329 ------LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+K+L G +H+ +K + D+ I N+LID+Y+K G+ + + +FD ++E+DV
Sbjct: 362 ASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQSIFDVMLERDV 421
Query: 383 ------------------AH--------------VVSWNSMIGGYGLNGQMEEAKELF-- 408
AH VV+WN MI G+ NG +EA LF
Sbjct: 422 YSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNGDEDEALNLFLR 481
Query: 409 ---DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
D K N SW+++ISG+L+++Q D +F +M S PN T ++L A ++
Sbjct: 482 IEKDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSNMAPNLVTVLTILPACTNLV 541
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+ +K K++H + ++ + D+YAKSG+I SR+VFD + K+ ISW ++
Sbjct: 542 AAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDGLSPKDIISWNSLLS 601
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
G G ++ +++LF++M K + P+ +T+ S++ A SH+ +VD+G F+++ Y I+
Sbjct: 602 GYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAEMVDEGKHAFSNISEEYQIR 661
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
+ HY+ +V +L RSG+L++A +FI +MP EP+S+ WA+LL+ C+ +KN +A A ++
Sbjct: 662 LDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALLTACRIHKNFGMAIFAGEH 721
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
+ +L E+ LLS Y+ G+ +A + KL EK ++ G SW+E+ N VH F
Sbjct: 722 MLELDPENIITQHLLSQAYSVCGKSWEAQKMTKLEKEKFVKMPVGQSWIEMNNMVHTFVV 781
Query: 706 KTDHN 710
D +
Sbjct: 782 GDDQS 786
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 241/529 (45%), Gaps = 85/529 (16%)
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS- 220
NG EA+ + L + G K +TF ++ +AC + + +G + I G + V+
Sbjct: 62 NGSLSEAVAILDSLAQQGSKVRPITFMNLLQACIDKDCILVGRELHTRI---GLVRKVNP 118
Query: 221 -VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V L+++ K G +D AR VFD M +R++ +W+ + +G R
Sbjct: 119 FVETKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAM---------IGACSR-------- 161
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
++ W EE LF M ++ P+ VL A + + +G +H
Sbjct: 162 -DLKW-------------EEVVELFYDMMQHGVLPDDFLLPKVLKACGKFRDIETGRLIH 207
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ V++ G+ + ++N+++ +Y+KCGE +F + E++ VSWN +I GY G
Sbjct: 208 SLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFRRMDERN---CVSWNVIITGYCQRG 264
Query: 400 QMEEAKELFDNMPKRN--------------------------------------DV-SWS 420
++E+A++ FD M + DV +W+
Sbjct: 265 EIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDIAMDLMRKMESFGITPDVYTWT 324
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
++ISG+ + + + F + +ML+ G PN T +S A ASV SL G ++H +K
Sbjct: 325 SMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKT 384
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D+ +G +L D YAK GD+E+++ +FD M +++ SW ++ G ++G+ ++ LF
Sbjct: 385 SMVDDILIGNSLIDMYAKGGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELF 444
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+M+++ PN +T ++ +G D+ L F +E IKPN + ++ +
Sbjct: 445 MKMQESDSPPNVVTWNVMITGFMQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQ 504
Query: 601 SGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+ + +A M F P+ ++L C +A + VK +
Sbjct: 505 NRQKDKALQIFRQMQFSNMAPNLVTVLTILPACTNL----VAAKKVKEI 549
>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
Length = 685
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 344/660 (52%), Gaps = 38/660 (5%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L S N V GR +H ++K+G+ Y+ +L MY R +A + +D D
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
N M++ ++ L +A +LFD MPER+ VS+T LI G+ ++ +
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ-------------- 153
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
W+ EA++LF ++ G+ NEVT +++ AC+ + +
Sbjct: 154 ----WS-------------EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQ 196
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
L K E V V +L+ + + AR +FD M +R++V+W V+L+ + + G +
Sbjct: 197 SLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIE 256
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A +FD++ E++ VSW MI + +EA + +M R KP+ +LSA A
Sbjct: 257 QAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASA 316
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
G+ +H ++K G + F+ +I Y+ + K F++ V+ H+ S
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD---HIAS 373
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
N++I G+ NG +E+A+E+FD ++ SW+A+ISGY + L +F EM+ S +
Sbjct: 374 RNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQ 433
Query: 448 I-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
+ P+ T SV A +S+ SLE+GK H + P + L A+ D YAK G IE++
Sbjct: 434 VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 507 RVFDRMPD--KNEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+F + + + IS W ++ G A G+AK +++L+ +++ I PN +T + VL AC
Sbjct: 494 NIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV+ G YF SM+ + I+P+ +HY C+VD+L ++GRL EA++ I MP + D W
Sbjct: 554 HAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIW 613
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
LLS +T+ N +IAE A L + H V+LSN+YA AGRW D VR+ M +
Sbjct: 614 GMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 63/249 (25%)
Query: 444 LSGEIPN-KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS--- 499
SGE + + S L + AS + G+ +H +++K G + ++ ++ + YAK
Sbjct: 33 FSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLL 92
Query: 500 GDIES----------------------SRR------VFDRMPDKNEISWTVMVRGLAESG 531
D ES SRR +FD MP+++ +S+T +++G A++
Sbjct: 93 ADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNN 152
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSH-SGLVD----KGLKYFNSMEPIYNIKP 586
E++ LF EM I NE+T+ +V+ ACSH G+ D + L +E +
Sbjct: 153 QWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVST 212
Query: 587 NGRHYTCVVDML-------------------------SRSGRLSEAEDFINSMPFEPDSN 621
N H C+ L S++G + +AE+ + + E D
Sbjct: 213 NLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT-EKDIV 271
Query: 622 AWASLLSGC 630
+W +++ GC
Sbjct: 272 SWGTMIDGC 280
>gi|115436706|ref|NP_001043111.1| Os01g0390600 [Oryza sativa Japonica Group]
gi|21328171|dbj|BAC00748.1| pentatricopeptide (PPR) repeat-containing-like protein [Oryza
sativa Japonica Group]
gi|113532642|dbj|BAF05025.1| Os01g0390600 [Oryza sativa Japonica Group]
Length = 657
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 311/597 (52%), Gaps = 12/597 (2%)
Query: 106 AQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
A LFD +P R+ + L+S + GR+E + P ++ +S+T I ++G
Sbjct: 62 AYHLFDEIPPLLRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSG 121
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSI--CKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
AL +F +L V+PNEVT + + AC +G + G+ + G + V V
Sbjct: 122 HPERALAVFRDMLTEAVQPNEVTLAEVLTAMACDHGAPAPVG-AAHGVAVRRGLDGFVIV 180
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
+L+ + +V ARS+F+ M R+ V+W +L+ +++ G + A +F +PER+E
Sbjct: 181 ATNLVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERDE 240
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW MI Y + + +A R + M + N ++ A + A+ G +H
Sbjct: 241 VSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHT 300
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+LK G + F+ LI Y C ++ F D +HV SWN+++
Sbjct: 301 VILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFK---LSDKSHVASWNALMASLLRRNL 357
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ EA++LFD+MP+R+ +SWS +ISGY++ ++ +F ML +G PN+ T +S L A
Sbjct: 358 VHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSA 417
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN-EIS 519
A+ +L + + +H II L L + YAK G I + ++F+ + DK+ +S
Sbjct: 418 VANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVKDKSISVS 477
Query: 520 -WTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNS 577
W ++ LA GY S+ LF +++ T+ I PN +T L VL AC H+G+V +G + F S
Sbjct: 478 PWNSIICNLAIHGYVNMSLELFSQLQSTTHIKPNSITYLGVLNACCHAGMVAEGKRQFES 537
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M Y I+P +HY C+VD+L R+G L EAE I +MP + D AW +L+ +T N
Sbjct: 538 MRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVA 597
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+ E+A + L KL H A + LSN+YA AG W + VRK + + L + G S +
Sbjct: 598 LGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRKELQNENLERLTGSSGI 654
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 216/469 (46%), Gaps = 35/469 (7%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ L+GF +V N +++A + A+ +F+ MP+RN V+W +++ ++K G + +
Sbjct: 172 RGLDGFVIVATN-LVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAE 230
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEIN 198
F P ++ +SW I G++ F +AL+ ++ ++ + G++ NEV + KAC+ +
Sbjct: 231 VFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHS 290
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + +I K GF+ H V +LI +D A+ F +K V SW ++
Sbjct: 291 AVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFKLSDKSHVASWNALMA 350
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ + EAR++FD+MPER+ +SWS +I+ Y QSG A ++F M +PN
Sbjct: 351 SLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEIT 410
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ LSA+A+ L +H +++ I+ +S LI++Y+KCG + +F+ +
Sbjct: 411 LASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVK 470
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+K ++ V WNS+I ++G + + ELF + +
Sbjct: 471 DKSIS-VSPWNSIICNLAIHGYVNMSLELFSQLQSTTHIK-------------------- 509
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGK-DLHGKIIKLGFPYDVFLGTALTDTYA 497
PN T+ VL A + +GK + G ++ + D
Sbjct: 510 ----------PNSITYLGVLNACCHAGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLC 559
Query: 498 KSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAESGYAKESINLFEEMEK 545
++G +E + + MP K + ++W ++ G EE+ K
Sbjct: 560 RAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVALGEKAAEELSK 608
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 271/476 (56%), Gaps = 39/476 (8%)
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
L +S+F + D+V +L+++ + G L EAR++FD+MPER+ V+W+ +I+ Y+Q
Sbjct: 77 LIQSIF----RHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDR 132
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
P +A LF QM R+ F PN S V+ A A+ + G +H +K G + +V + +A
Sbjct: 133 PFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 192
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
L+DLY++ YGL M++A+ +FD + RND
Sbjct: 193 LLDLYTR-------------------------------YGL---MDDAQLVFDALESRND 218
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSW+A+I+G+ + +F ML G P+ +++S+ A +S LE+GK +H
Sbjct: 219 VSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 278
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+IK G F G L D YAKSG I +R++FDR+ ++ +SW ++ A+ G+ E+
Sbjct: 279 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEA 338
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ FEEM + I PNE++ LSVL ACSHSGL+D+G Y+ M+ I HY +VD
Sbjct: 339 VCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVD 397
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L R+G L+ A FI MP EP + W +LL+ C+ +KN ++ A +++++L + P
Sbjct: 398 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 457
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+V+L NIYAS GRW DA VRK M E G++K CSWVE+ N +H F + +P+
Sbjct: 458 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQ 513
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 213/487 (43%), Gaps = 127/487 (26%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK T L+ QGR +HGHLI++ + D
Sbjct: 57 LLKKCTVFKLLTQGRIVHGHLIQS-------------------------------IFRHD 85
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
LV++N ++N + G+LEEA+++FD MPER+ V+WT LISG+ +H R
Sbjct: 86 LVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDR------------- 132
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
F+AL LF ++L G PNE T SS+ KA A G +
Sbjct: 133 ------------------PFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQL 174
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G K GF+ +V V ++L+ L + G +D A+ VFD +E R
Sbjct: 175 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR------------------ 216
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
N+VSW+ +IA + + E+A LF+ M R F+P+ ++ + A
Sbjct: 217 -------------NDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGAC 263
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+S L G VHA+++K G + F N L+D+Y+K G D R +FD + ++D VV
Sbjct: 264 SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD---VV 320
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWNS++ Y +G EA V W F EM G
Sbjct: 321 SWNSLLTAYAQHGFGNEA------------VCW-------------------FEEMRRGG 349
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN+ +F SVL A + L++G + + K G + + + D ++GD+ +
Sbjct: 350 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRAL 409
Query: 507 RVFDRMP 513
R + MP
Sbjct: 410 RFIEEMP 416
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 118/239 (49%), Gaps = 13/239 (5%)
Query: 448 IPNKSTFSSVLCASASVASL-EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
IP F + L +V L +G+ +HG +I+ F +D+ + L + YAK G +E +R
Sbjct: 47 IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEAR 106
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS--H 564
+VFD+MP+++ ++WT ++ G ++ +++ LF +M + +PNE T+ SV+ A +
Sbjct: 107 KVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAER 166
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
G L F N + ++D+ +R G + +A+ +++ D +W
Sbjct: 167 RGCCGHQLHGFCVK---CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV-SWN 222
Query: 625 SLLSG----CKTYKNEQIAERAVKNLWKLAEEHPAGY--VLLSNIYASAGRWIDAMNVR 677
+L++G C T K ++ + ++ ++ + A S + G+W+ A ++
Sbjct: 223 ALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 281
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 130/324 (40%), Gaps = 47/324 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG +K G ++ + LL +Y +A + L + V N +I + +
Sbjct: 171 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 230
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALI-----SGFMKHGR----------------- 133
E+A LF GM + S+ +L +GF++ G+
Sbjct: 231 RCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 290
Query: 134 -------------VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+ ++ F+R ++V+SW + + + Q+GF EA+ F ++ G+
Sbjct: 291 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGI 350
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+PNE++F S+ AC+ G + L+ K G +++ L + G+++ A
Sbjct: 351 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALR 410
Query: 241 VFDRMEKRDVVS-WTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ M + W +L+ E+G A +F+ P+ + ++ Y
Sbjct: 411 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYA-AEHVFELDPD-DPGPHVILYNIYASG 468
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSC 318
G +A R+ ++M K +C
Sbjct: 469 GRWNDAARVRKKMKESGVKKEPAC 492
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 116/287 (40%), Gaps = 29/287 (10%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L +S + QG+ +H ++IK+G + LL MY S +A +I L D
Sbjct: 259 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD 318
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPE----RNEVSWTALISGFMKHGRVEESMWYFE 142
+V N ++ A Q G EA F+ M NE+S+ ++++ G ++E Y+E
Sbjct: 319 VVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYE 378
Query: 143 RNPFQNVI--SWT-AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
++ +W I + F++ E ++P + ++ AC +
Sbjct: 379 LMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIE--EMPIEPTAAIWKALLNACRMHKN 436
Query: 200 FRLGLSVFGLIFKAGFE---KHVSVCNSLITLSLKMGEVDLARSVFDRM-----EKRDVV 251
LG +F+ + HV + N + G + A V +M +K
Sbjct: 437 TELGAYAAEHVFELDPDDPGPHVILYN----IYASGGRWNDAARVRKKMKESGVKKEPAC 492
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVS--WSVMIARYNQSGY 296
SW I + I M + R P+R E++ W ++A+ + GY
Sbjct: 493 SWVEIENA-IHMFVANDERH-----PQREEIARKWEEVLAKIKELGY 533
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 302/563 (53%), Gaps = 52/563 (9%)
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+W++ I + + + F + V PN F S+ KA + +L S+
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ G + + + N+LI K A VFD KR E G + +
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHN---AGKVFDVFPKRG------------ESG-IDCVK 180
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASL 329
++FD MP R+ VSW+ +IA + Q+G EA + R+M + KP++ S +L A
Sbjct: 181 KVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEH 240
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ G +H + ++ G + DVFI ++LID+Y+KC
Sbjct: 241 VDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCN------------------------ 276
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
++E + F +P+++ +SW++II+G +++ +FD F ML P
Sbjct: 277 ----------RLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKP 326
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+FSSV+ A A + +L G+ LHG I++LGF + F+ ++L D YAK G+I+ +R VF
Sbjct: 327 MAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVF 386
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
DR+ ++ ++WT ++ G A G+A ++++LFE M + + P + ++VL ACSH+GLVD
Sbjct: 387 DRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVD 446
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM-PFEPDSNAWASLLS 628
+G +YFNSME + I P HY V D+L R+GRL EA DFI++M +P + W+ LL+
Sbjct: 447 EGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLA 506
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ +K+ ++AE+ + L + E+ YVL+SNIY++A RW DA +R M +KGL+K+
Sbjct: 507 ACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKT 566
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
CSW+EV NQVH F +P
Sbjct: 567 PACSWIEVGNQVHTFMAGDKSHP 589
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 157/327 (48%), Gaps = 51/327 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL + N +IN + A ++FD P+R E SG +V F+ P
Sbjct: 144 DLYIANALINT---YAKFHNAGKVFDVFPKRGE-------SGIDCVKKV------FDMMP 187
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGL 204
++V+SW I GF QNG EAL + ++ ++G +KP+ T SSI AE D G
Sbjct: 188 VRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGK 247
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ G + GF+ V + +SLI + K ++ + F + ++D +SW I
Sbjct: 248 EIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSI-------- 299
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
IA Q+G + FR+M + + KP FS V+
Sbjct: 300 -----------------------IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIP 336
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A L AL G +H ++++G + + FI+++L+D+Y+KCG K R VFD I ++D
Sbjct: 337 ACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRD--- 393
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNM 411
+V+W ++I G ++G +A LF+NM
Sbjct: 394 MVAWTAIIMGCAMHGHALDAVSLFENM 420
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 5/211 (2%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
++LI + K R+E S+ F P ++ ISW + I G VQNG L F ++L+ VK
Sbjct: 266 SSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVK 325
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P V+FSS+ ACA + LG + G I + GF+ + + +SL+ + K G + +AR V
Sbjct: 326 PMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYV 385
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGYP 297
FDR++KRD+V+WT I+ G +A +F+ M E V++ ++ + +G
Sbjct: 386 FDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLV 445
Query: 298 EEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
+E +R F M R + P ++ V L
Sbjct: 446 DEGWRYFNSMERDFGIAPGLEHYAAVADLLG 476
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 136/331 (41%), Gaps = 53/331 (16%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRK---SLEANEIV--KDLNGFDLVVHN 91
V +G+ +HG+ ++ G + ++ + L+ MY + SL A I+ KD ++ ++
Sbjct: 243 VNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAG 302
Query: 92 CMINANIQWG----------NLEEAQRLFDG-MP-----------------------ERN 117
C+ N G N++ F +P + N
Sbjct: 303 CVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDN 362
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
E ++L+ + K G ++ + + F+R +++++WTA I G +G + +A+ LF +LE
Sbjct: 363 EFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLE 422
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLI-----FKAGFEKHVSVCNSLITLSLKM 232
GV+P V F ++ AC+ G F + G E + +V + L +
Sbjct: 423 DGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVAD----LLGRA 478
Query: 233 GEVDLARSVFDRMEKRDVVS--WTVILDVFIEMGDLGEARRIFDEM---PERNEVSWSVM 287
G ++ A M W+++L + A ++ D++ N ++ +M
Sbjct: 479 GRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLM 538
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
Y+ + ++A RL M + K +C
Sbjct: 539 SNIYSAAQRWKDAARLRIHMRKKGLKKTPAC 569
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 192/557 (34%), Positives = 303/557 (54%), Gaps = 46/557 (8%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W A I AL LF +LE+GV ++ + S + KAC+ + + G+ + G +
Sbjct: 93 WNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGFLK 152
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K G + + N LI L LK G + AR +FDRM +RD VS+ ++D +++ G AR
Sbjct: 153 KTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARE 212
Query: 272 IFDEMPE--RNEVSWSVMIARYNQ-SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
+FD MPE +N +SW+ MI+ Y Q S + A +LF +M
Sbjct: 213 LFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMP-------------------- 252
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+KD+ N++ID Y K G +D + +FD + +DV V+W
Sbjct: 253 -------------------DKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDV---VTW 290
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++MI GY G + +AK LFD MP R+ VS++++I+GY++++ +F++M +
Sbjct: 291 STMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHL 350
Query: 449 -PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+++T VL A A + L K D+H I++ F LG AL D Y+K G I+ +
Sbjct: 351 SPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAML 410
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF + +K+ W M+ GLA G + + ++ ++E+ SI P+++T + +L ACSHSGL
Sbjct: 411 VFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGL 470
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
V +GL F M + I+P +HY C+VD+LSRSG + A++ I MP EP+ W + L
Sbjct: 471 VKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFL 530
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
+ C +K + E K+L A +P+ YVLLSN+YAS G+W D +R +M E+ + K
Sbjct: 531 AACNHHKEFETGELVAKHLIWEAGYNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEK 590
Query: 688 SGGCSWVEVRNQVHFFF 704
GCSW+E+ +VH FF
Sbjct: 591 VPGCSWIELDGRVHEFF 607
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 245/552 (44%), Gaps = 131/552 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + LV +G +HG L KTG+ D
Sbjct: 131 VLKACSRLGLVKEGMQIHGFLKKTGLWS-------------------------------D 159
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP- 145
L + NC+I ++ G L A+++FD MP+R+ VS+ ++I G++K G E + F+ P
Sbjct: 160 LFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPE 219
Query: 146 -FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+N+ISW + I G+ Q G+
Sbjct: 220 EMKNLISWNSMISGYAQTSD--------------------------------------GV 241
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ +F +K + NS+I +K G ++ A+ +FD M +RDVV+W+ ++D + ++G
Sbjct: 242 DIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLG 301
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVL 323
+ +A+ +FD+MP R+ VS++ MIA Y Q+ Y EA +F M + S P+ + IVL
Sbjct: 302 FVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVL 361
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISN----ALIDLYSKCGETKDGRLVFDSIVE 379
SA+A L L M +H ++ +EK F+ ALID+YSKCG + LVF I
Sbjct: 362 SAIAQLGRLSKAMDMHLYI----VEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIEN 417
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF-AV 438
K + H WN+MIGG ++G E A ++ + +R+ K D+ F +
Sbjct: 418 KSIDH---WNAMIGGLAIHGLGESAFDMLLQIERRSI-------------KPDDITFVGL 461
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
N SG + +LC + + + ++ G + D ++
Sbjct: 462 LNACSHSGLVKE-----GLLCFEL----MRRKHKIEPRLQHYG---------CMVDILSR 503
Query: 499 SGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEME--------KTSIT 549
SG IE ++ + + MP + N++ W LA + KE FE E +
Sbjct: 504 SGSIELAKNLIEEMPIEPNDVIWRTF---LAACNHHKE----FETGELVAKHLIWEAGYN 556
Query: 550 PNELTILSVLFA 561
P+ +LS L+A
Sbjct: 557 PSSYVLLSNLYA 568
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 179/450 (39%), Positives = 257/450 (57%), Gaps = 7/450 (1%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G L AR +F+++P + + +I Y P +A ++ M P+ F
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFP--- 82
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
S S L G +H H K+G D +I N L+++YS CG R VFD +V K V
Sbjct: 83 SLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV- 141
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VSW +MIG Y EA +LF M N W+ +I+G++E ++ ++FNEM
Sbjct: 142 --VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM 199
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
LSG +K T +S+L A + +LE GK LH I K DV LGTAL D YAK G I
Sbjct: 200 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSI 259
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
ES+ RVF MP+K+ ++WT ++ GLA G +++ LF EM+ + + P+ +T + VL AC
Sbjct: 260 ESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 319
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH+GLV++G+ YFNSM Y I+P+ HY C+VDML R+GR++EAED I +MP PD
Sbjct: 320 SHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 379
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
LLS C+ + N +AERA + L +L ++ YVLLSNIY+S W A +R+LM E
Sbjct: 380 LVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVE 439
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ ++K GCS +EV VH F + +P+
Sbjct: 440 RNIKKPPGCSAIEVGGVVHEFVKGDVSHPQ 469
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 206/468 (44%), Gaps = 56/468 (11%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL----IMYLGSRKSLEANEI 78
TC +++ T++NL Q + ++ G+ +R+ L ++ G + + ++
Sbjct: 45 TCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQLHCHSTKL 104
Query: 79 VKDLNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
GF D + N ++N G L A+++FD M ++ VSW +I + + E
Sbjct: 105 -----GFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHE 159
Query: 137 SMWYFERNPF-QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
++ F R N+ W I G V++ EAL LF ++ SGVK ++VT +S+ AC
Sbjct: 160 AIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACT 219
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ LG + I K E V++ +L+ + K G ++ A VF M ++DV++WT
Sbjct: 220 HLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTA 279
Query: 256 ILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRY 310
++ G +A +F EM + + +++ ++A + +G E F M +Y
Sbjct: 280 LIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKY 339
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETK 368
+P+ + ++ L R+G A L + + D F+ L+ L S C
Sbjct: 340 GIQPSIEHYGCMVDMLG-----RAGRIAEAEDLIQNMPMAPDYFV---LVGLLSAC--RI 389
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGG--------YGLNGQMEEAKELFDNMPKRN---DV 417
G LV + E+ ++ + GG Y E AK++ + M +RN
Sbjct: 390 HGNLV---VAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPP 446
Query: 418 SWSAI---------ISGYLEHKQFDLVFAVFNEMLL----SGEIPNKS 452
SAI + G + H Q ++ ++M+ +G +P+KS
Sbjct: 447 GCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKS 494
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 203/672 (30%), Positives = 331/672 (49%), Gaps = 135/672 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY--LGSRKSLEANEIVKDLNG 84
LL+ T G H H IK+G+ +R++ LL +Y LG
Sbjct: 66 LLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGP--------------- 110
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
NL EA+R+FDG+
Sbjct: 111 -----------------NLFEARRVFDGLF------------------------------ 123
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
++++ISWT+ I G+V+ ++L+LFL++L G++PN T S++ KAC+ + D RLG
Sbjct: 124 -YKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGK 182
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
G++ GF+ + DV+S T ++D++
Sbjct: 183 CFHGVVMVRGFDLN------------------------------DVIS-TALIDMYGRNS 211
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
+ +A +F E+P+ + + W+ +I+ + ++ ++A F M R + P+ F VL
Sbjct: 212 AVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVL 271
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+A +L L+ G VHA V+ G+ +VF+ ++L+D+Y KC RLV
Sbjct: 272 TACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKC------RLV---------- 315
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+++ +FD M +N VSW+A++ GY ++ F+ V +F E
Sbjct: 316 ------------------NQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE-- 355
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G+ + +F +VL A A +A++ +GK++H + +K DV +AL D YAK G I+
Sbjct: 356 --GKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCID 413
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ R+F RM +N I+W M+ G A++G E LF+EM + I P+ ++ + VLFACS
Sbjct: 414 FAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACS 473
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLVD+G KYF +M +Y IKP HY C++D+L R+G L EAE+ I + + + W
Sbjct: 474 HAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLW 533
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
LL C + AER K +L +H YV L+N+Y + GRW DA+ +R LMT++
Sbjct: 534 TVLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKR 593
Query: 684 GLRKSGGCSWVE 695
G+ K G SW+E
Sbjct: 594 GVGKMPGTSWIE 605
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 42/354 (11%)
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQM--TRYSFKPNTSCFSIVLSALASLKALRSGMH 337
N S + I +Y +SG EA + + TR S KP ++ +L + G+
Sbjct: 24 NPQSKAYKIIQYCKSGSLFEAIHVLNSIDWTRLSNKPFF--YASLLQTCTKAVSFTHGIQ 81
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETK-DGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
H+H +K G++ D F+ N+L+ LY K G + R VFD + KD ++SW SMI GY
Sbjct: 82 FHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKD---LISWTSMITGY- 137
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
++E+ PK++ +F EML G PN T S+
Sbjct: 138 --VKVEK--------PKKS--------------------LELFLEMLGLGIEPNGFTLSA 167
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
V+ A + + L GK HG ++ GF + + TAL D Y ++ ++ + VF +P +
Sbjct: 168 VIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPD 227
Query: 517 EISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYF 575
I WT ++ + +++ F M K ++P+ T +VL AC + G + +G K
Sbjct: 228 AICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQG-KEV 286
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ + N + +VDM + +++++ + M + + +W +LL G
Sbjct: 287 HAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVK-NLVSWTALLGG 339
>gi|125526069|gb|EAY74183.1| hypothetical protein OsI_02067 [Oryza sativa Indica Group]
Length = 657
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 311/597 (52%), Gaps = 12/597 (2%)
Query: 106 AQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
A LFD +P R+ + L+S + GR+E + P ++ +S+T I ++G
Sbjct: 62 AYHLFDEIPPLLRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSG 121
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSI--CKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
AL +F +L V+PNEVT + + AC +G + G+ + G + V V
Sbjct: 122 HPERALAVFRDMLTEAVQPNEVTLAEVLTAMACDHGAPAPVG-AAHGVAVRRGLDGFVIV 180
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
+L+ + +V ARS+F+ M R+ V+W +L+ +++ G + A +F +PER+E
Sbjct: 181 ATNLVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERDE 240
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW MI Y + + +A R + M + N ++ A + A+ G +H
Sbjct: 241 VSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHT 300
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+LK G + F+ LI Y C ++ F D +HV SWN+++
Sbjct: 301 VILKNGFDAHAFVQATLIHYYGSCDFIDHSQMQFK---LSDKSHVASWNALMASLLRRNL 357
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ EA++LFD+MP+R+ +SWS +ISGY++ ++ +F ML +G PN+ T +S L A
Sbjct: 358 VHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSA 417
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN-EIS 519
A+ +L + + +H II L L + YAK G I + ++F+ + DK+ +S
Sbjct: 418 VANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVKDKSISVS 477
Query: 520 -WTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNS 577
W ++ LA GY S+ LF +++ T+ I PN +T L VL AC H+G+V +G + F S
Sbjct: 478 PWNSIICNLAIHGYVNMSLELFSQLQSTTNIKPNSITYLGVLNACCHAGMVAEGKRQFES 537
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M Y I+P +HY C+VD+L R+G L EAE I +MP + D AW +L+ +T N
Sbjct: 538 MRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVA 597
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+ E+A + L KL H A + LSN+YA AG W + VRK + + L + G S +
Sbjct: 598 LGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRKELQNENLERLTGSSGI 654
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 217/469 (46%), Gaps = 35/469 (7%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ L+GF +V N +++A + A+ +F+ MP+RN V+W +++ ++K G + +
Sbjct: 172 RGLDGFVIVATN-LVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAE 230
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEIN 198
F P ++ +SW I G++ F +AL+ ++ ++ + G++ NEV + KAC+ +
Sbjct: 231 VFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHS 290
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + +I K GF+ H V +LI +D ++ F +K V SW ++
Sbjct: 291 AVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHSQMQFKLSDKSHVASWNALMA 350
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ + EAR++FD+MPER+ +SWS +I+ Y QSG A ++F M +PN
Sbjct: 351 SLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEIT 410
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ LSA+A+ L +H +++ I+ +S LI++Y+KCG + +F+ +
Sbjct: 411 LASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVK 470
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+K ++ V WNS+I ++G + + ELF + ++
Sbjct: 471 DKSIS-VSPWNSIICNLAIHGYVNMSLELFSQLQSTTNIK-------------------- 509
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGK-DLHGKIIKLGFPYDVFLGTALTDTYA 497
PN T+ VL A + +GK + G ++ + D
Sbjct: 510 ----------PNSITYLGVLNACCHAGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLC 559
Query: 498 KSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAESGYAKESINLFEEMEK 545
++G +E + + MP K + ++W ++ G EE+ K
Sbjct: 560 RAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVALGEKAAEELSK 608
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/683 (29%), Positives = 329/683 (48%), Gaps = 83/683 (12%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
K I + N +++G GH K IH S+ + + D + LV
Sbjct: 96 KPIIAWNAILRGLVAVGHFTK-AIH---------------FYHSMLQHGVTPDNYTYPLV 139
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ C +Q G G + N A+I F K G VE++ FE P ++
Sbjct: 140 LKACSSLHALQLGRW--VHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRD 197
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+ SWTA ICG + NG EAL LF K+ G+ P+ V +SI AC + +LG+++
Sbjct: 198 LASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQV 257
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
++GFE + V N++I D++ + GD E
Sbjct: 258 CAVRSGFESDLYVSNAVI-------------------------------DMYCKCGDPLE 286
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A R+F M + VSWS +IA Y+Q+ +E+++L+ M N + VL AL
Sbjct: 287 AHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGK 346
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L+ L+ G +H VLK G+ DV + +ALI +Y+ CG K
Sbjct: 347 LELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIK-------------------- 386
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
EA+ +F+ ++ + W+++I GY F+ F F + +
Sbjct: 387 --------------EAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHR 432
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN T S+L + +L +GK++HG + K G +V +G +L D Y+K G +E +V
Sbjct: 433 PNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKV 492
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F +M +N ++ M+ G ++ + +E+M++ PN++T +S+L ACSH+GL+
Sbjct: 493 FKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLL 552
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
D+G +NSM Y I+PN HY+C+VD++ R+G L A FI MP PD+N + SLL
Sbjct: 553 DRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLG 612
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ + ++ E + + +L + YVLLSN+YAS RW D VR ++ +KGL K
Sbjct: 613 ACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKK 672
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
G SW++V + ++ F + +P
Sbjct: 673 PGSSWIQVGHCIYVFHATSAFHP 695
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 463 SVASLEKGKDLHGKIIKLGF-----PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
S +L + + LH ++ LGF P+ + L + Y G ++ + F +P K
Sbjct: 39 SPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPI 98
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
I+W ++RGL G+ ++I+ + M + +TP+ T VL ACS + G +
Sbjct: 99 IAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHET 158
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M K N V+DM ++ G + +A MP + D +W +L+ C T N +
Sbjct: 159 MHG--KTKANVYVQCAVIDMFAKCGSVEDARRMFEEMP-DRDLASWTALI--CGTMWNGE 213
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
E + +E V++++I + GR
Sbjct: 214 CLEALLLFRKMRSEGLMPDSVIVASILPACGR 245
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 267/444 (60%), Gaps = 3/444 (0%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
LG A IF ++ N ++V+I ++ P +AF + QM + P+ F ++ A
Sbjct: 69 LGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 128
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++ + G H+ +++ G + DV++ N+L+ +Y+ CG +F + +DV
Sbjct: 129 STEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDV--- 185
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW SM+ GY G +E+A+E+FD MP RN +WS +I+GY ++ F+ +F M
Sbjct: 186 VSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKRE 245
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + N++ SV+ + A + +LE G+ H ++K ++ LGTAL D Y + G+IE +
Sbjct: 246 GVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKA 305
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
RVF+ +PDK+ +SW+ +++GLA G+A ++I+ F +M + +P ++T+ +VL ACSH
Sbjct: 306 IRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHG 365
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLVDKGL+ + +M+ Y I+P HY C+VDML R+G+L+EAE+FI MP +P++ +
Sbjct: 366 GLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGA 425
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL CK YKN ++AER L ++ EH YVLLSNIYA AG+W ++R +M EK +
Sbjct: 426 LLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLV 485
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDH 709
+K G S +E+ +++ F D
Sbjct: 486 KKPPGWSLIEIDGKINKFSMGDDQ 509
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 150/287 (52%), Gaps = 9/287 (3%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+NP N+ + I F +A + ++L+S + P+ +TF + KA E+ +
Sbjct: 80 QNP--NLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVVV 137
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G I + GF+ V V NSL+ + G + A +F +M RDVVSWT ++ + +
Sbjct: 138 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCK 197
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G + +AR +FDEMP RN +WS+MI Y ++ E+A LF M R N + V
Sbjct: 198 CGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSV 257
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+S+ A L AL G H +V+K + ++ + AL+D+Y +CGE + VF+ + +KD
Sbjct: 258 ISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKD- 316
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISG 425
+SW+S+I G ++G +A F M + D++ +A++S
Sbjct: 317 --SLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSA 361
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 173/406 (42%), Gaps = 46/406 (11%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L+K T V+ G H +++ G + Y+ L+ MY
Sbjct: 125 LIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYA------------------- 165
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
NC G + A R+F MP R+ VSWT++++G+ K G VE++ F+ P
Sbjct: 166 ----NC--------GLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPH 213
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N+ +W+ I G+ +N +A+ LF + GV NE S+ +CA + G
Sbjct: 214 RNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERA 273
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K+ ++ + +L+ + + GE++ A VF+ + +D +SW+ I+ G
Sbjct: 274 HEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHA 333
Query: 267 GEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSI 321
+A F +M +++ + +++ + G ++ ++ M R Y +P +
Sbjct: 334 HKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGC 393
Query: 322 VLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
++ L R+G A +LK+ ++ + I AL+ T+ V + ++E
Sbjct: 394 IVDMLG-----RAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIE 448
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK---RNDVSWSAI 422
H + + Y GQ E+ + L D M + + WS I
Sbjct: 449 VKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLI 494
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 152/348 (43%), Gaps = 58/348 (16%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L+ L S + +H +L+ + DVF+++ L+ L V DS K
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLAL---------ALCVDDSTFHKPT 66
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
N + YG+ Q++ N ++ +I + + F + +M
Sbjct: 67 ------NLLGYAYGIFSQIQNP----------NLFVFNVLIRCFSTGAEPSKAFGFYTQM 110
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA----- 497
L S P+ TF ++ AS + + G+ H +I++ GF DV++ +L YA
Sbjct: 111 LKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLI 170
Query: 498 --------------------------KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
K G +E +R +FD MP +N +W++M+ G A++
Sbjct: 171 AAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNN 230
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+++I+LFE M++ + NE ++SV+ +C+H G ++ G + + + + N
Sbjct: 231 CFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSH-MTVNLILG 289
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
T +VDM R G + +A +P + DS +W+S++ G + + A
Sbjct: 290 TALVDMYWRCGEIEKAIRVFEELP-DKDSLSWSSIIKGLAVHGHAHKA 336
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/572 (34%), Positives = 293/572 (51%), Gaps = 69/572 (12%)
Query: 143 RNPFQNVISWTAAICGF-VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
R P N+ + A I G N S E L ++ ++L G+ P+ T + KACAE R
Sbjct: 85 RTP--NLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVR 142
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V G K G V V N+L+ + D+ RS
Sbjct: 143 EGEEVHGQAIKMGLASDVYVSNTLMRM---YAVCDVIRS--------------------- 178
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
AR++FD P+R+ VSW+ MI Y + G+ E LF +M + + + I
Sbjct: 179 -------ARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVI 231
Query: 322 VLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VLS+ A L LR G +H ++++ + DVF+ NAL+D+Y KCG+
Sbjct: 232 VLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDA------------- 278
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
A+++F MP +N VSW+++ISG + QF +F
Sbjct: 279 ---------------------NFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFR 317
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+M G P+ T +VL + A++ LE GK +H + + D F+G AL D YAK G
Sbjct: 318 KMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCG 377
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
I+ + VF M K+ S+T M+ GLA G ++++LF EM K I P+E+T + VL
Sbjct: 378 SIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLT 437
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSH GLV++G KYF M IYN++P HY C+VD+L R+G ++EAE+FI +MP EPD+
Sbjct: 438 ACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDA 497
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
+LL CK + ++ E +K + K+ YVL+SNIY+SA RW DA+ +RK M
Sbjct: 498 FVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 557
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
E+ L K+ GCS +E+ +H F + +PK
Sbjct: 558 KERNLEKTPGCSSIELDGVIHEFQKGDKSHPK 589
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 137/556 (24%), Positives = 225/556 (40%), Gaps = 135/556 (24%)
Query: 32 TSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI----VKDLNGFDL 87
TS N I+G ++ ++ GI + Y +L SR E E+ +K D+
Sbjct: 101 TSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDV 160
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V N ++ + A+++FD P+R+
Sbjct: 161 YVSNTLMRMYAVCDVIRSARKVFDTSPQRD------------------------------ 190
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
++SWT I G+V+ GF+ E + LF ++ ++ + +T + +CA + D RLG +
Sbjct: 191 -LVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLH 249
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
I + NS + L DV ++D++++ GD
Sbjct: 250 RYIIR----------NSNVNL--------------------DVFVGNALVDMYLKCGDAN 279
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
AR++F EMP +N VSW+ MI+ Q G +E+ +FR+M R KP+ VL++ A
Sbjct: 280 FARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCA 339
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+L L G VHA++ + I D FI NAL+D+Y+KCG VF ++ KD V S
Sbjct: 340 NLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKD---VYS 396
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+ +MI G ++GQ +A +LF MPK G
Sbjct: 397 YTAMIVGLAMHGQGGKALDLFSEMPKM-------------------------------GI 425
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P++ TF VL A + V +E+G+ E
Sbjct: 426 EPDEVTFVGVLTACSHVGLVEEGRKY----------------------------FEDMST 457
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+++ P + MV L +G E+ M I P+ + ++L AC G
Sbjct: 458 IYNLRPQLEH--YGCMVDLLGRAGLINEAEEFIRNM---PIEPDAFVLGALLGACKIHGK 512
Query: 568 VDKG---LKYFNSMEP 580
V+ G +K +EP
Sbjct: 513 VELGESVMKKIEKIEP 528
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 272/482 (56%), Gaps = 7/482 (1%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
C ++ + + ++ ++FD ++S+ + GD+ A +F +P R
Sbjct: 23 CVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAV----SAQGDISHAYLLFLSLPRRTS 78
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
W+ M+ + P L++ M F PN FS +L A A L L G+ +HA
Sbjct: 79 FIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQ 138
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+++G E F+ N L+ LY+ C R +FD V +DV V+W ++I GY +GQ+
Sbjct: 139 AVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDV---VTWTAVINGYAKSGQV 195
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
A++LFD MP++N VSWSA+I+GY + F +FN+M ++G PN L A
Sbjct: 196 VVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTAC 255
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A + +L++G+ +H + + D LGTAL D YAK G +E++ RVFD M D++ ++T
Sbjct: 256 AFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFT 315
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ GLA G++ +I +F M+ + PNE+T + +L ACS GLV++GL+ F SM I
Sbjct: 316 SLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNI 375
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
Y I+P +HY C+VD+L R+G L +A+ + MP EPDS +LL+ C+ + + ++ +
Sbjct: 376 YGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKE 435
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
V+ L + + +H +VLLSN+YASA +W D VRK M EK ++K GCS +EV V
Sbjct: 436 TVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVF 495
Query: 702 FF 703
F
Sbjct: 496 EF 497
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 199/429 (46%), Gaps = 41/429 (9%)
Query: 88 VVHNCMINANIQW--GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++ C+ A+I+ +L + LFD +S+ A+ + G + + F P
Sbjct: 19 LLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSA----QGDISHAYLLFLSLP 74
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ W + F L L+ +L +G PN TFS + +ACA+++D G+
Sbjct: 75 RRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGIL 134
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + G+E + V N L+ L +D AR +FD RDVV+WT +++ + + G
Sbjct: 135 LHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQ 194
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ AR++FDEMPE+N VSWS MI Y Q G EA LF M F+PN L+A
Sbjct: 195 VVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTA 254
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L AL G +HA+V + + D + ALID+Y+KCG + VFD ++++D V
Sbjct: 255 CAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRD---V 311
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
++ S+I G +G A E+F M NE
Sbjct: 312 FAFTSLISGLANHGHSATAIEMFTRMQ---------------------------NE---- 340
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIES 504
G PN+ TF +L A + V +E+G + + + G V L D ++G +E
Sbjct: 341 GVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLED 400
Query: 505 SRRVFDRMP 513
++RV MP
Sbjct: 401 AKRVVREMP 409
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 144/350 (41%), Gaps = 39/350 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LH ++ G ++ LL +Y A + D+V +IN +
Sbjct: 132 GILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAK 191
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + A++LFD MPE+N VSW+A+I+ G+
Sbjct: 192 SGQVVVARQLFDEMPEKNAVSWSAMIT-------------------------------GY 220
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
Q G EAL+LF + +G +PN ACA + G + + +
Sbjct: 221 AQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDR 280
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+ +LI + K G V+ A VFD M RDV ++T ++ G A +F M
Sbjct: 281 ILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNE 340
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRS 334
NEV++ +++ ++ G EE R+F+ MT Y +P + ++ L L
Sbjct: 341 GVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLED 400
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
V V ++ +E D ++ AL++ G+ + G+ + + E+ + H
Sbjct: 401 AKRV---VREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDH 447
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/464 (36%), Positives = 265/464 (57%), Gaps = 7/464 (1%)
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
++FD ++S+ + GD+ A +F +P R W+ M+ + P
Sbjct: 16 TLFDPFAAGRIISFCAV----SAQGDISHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPAT 71
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
L++ M F PN FS +L A A L L G+ +HA +++G E F+ N L+
Sbjct: 72 VLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLH 131
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
LY+ C R +FD V +DV V+W ++I GY +GQ+ A++LFD MP++N VSW
Sbjct: 132 LYASCNCMDSARRLFDGSVNRDV---VTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSW 188
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
SA+I+GY + F +FN+M ++G PN L A A + +L++G+ +H + +
Sbjct: 189 SAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDR 248
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
D LGTAL D YAK G +E++ RVFD M D++ ++T ++ GLA G++ +I +
Sbjct: 249 NRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEM 308
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F M+ + PNE+T + +L ACS GLV++GL+ F SM IY I+P +HY C+VD+L
Sbjct: 309 FTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLG 368
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G L +A+ + MP EPDS +LL+ C+ + + ++ + V+ L + + +H +VL
Sbjct: 369 RAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVL 428
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
LSN+YASA +W D VRK M EK ++K GCS +EV V F
Sbjct: 429 LSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEF 472
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 191/413 (46%), Gaps = 39/413 (9%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQ 161
+L + LFD +S+ A+ + G + + F P + W + F
Sbjct: 10 HLTVSGTLFDPFAAGRIISFCAVSA----QGDISHAYLLFLSLPRRTSFIWNTMLRAFTD 65
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
L L+ +L +G PN TFS + +ACA+++D G+ + + G+E + V
Sbjct: 66 KKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFV 125
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
N L+ L +D AR +FD RDVV+WT +++ + + G + AR++FDEMPE+N
Sbjct: 126 QNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNA 185
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
VSWS MI Y Q G EA LF M F+PN L+A A L AL G +HA+
Sbjct: 186 VSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAY 245
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
V + + D + ALID+Y+KCG + VFD ++++D V ++ S+I G +G
Sbjct: 246 VDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRD---VFAFTSLISGLANHGHS 302
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
A E+F M NE G PN+ TF +L A
Sbjct: 303 ATAIEMFTRMQ---------------------------NE----GVCPNEVTFICLLSAC 331
Query: 462 ASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ V +E+G + + + G V L D ++G +E ++RV MP
Sbjct: 332 SRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMP 384
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 8/301 (2%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N +++ ++ A+RLFDG R+ V+WTA+I+G+ K G+V + F+ P +N
Sbjct: 125 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 184
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+SW+A I G+ Q G EAL+LF + +G +PN ACA + G +
Sbjct: 185 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 244
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ + + +LI + K G V+ A VFD M RDV ++T ++ G
Sbjct: 245 YVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSAT 304
Query: 269 ARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
A +F M NEV++ +++ ++ G EE R+F+ MT Y +P + ++
Sbjct: 305 AIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLV 364
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
L L V V ++ +E D ++ AL++ G+ + G+ + + E+ +
Sbjct: 365 DLLGRAGMLEDAKRV---VREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLD 421
Query: 384 H 384
H
Sbjct: 422 H 422
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/718 (29%), Positives = 363/718 (50%), Gaps = 32/718 (4%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTG--IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
LL+ + + GR +H ++K G Y+ T+L+I Y +N + + +
Sbjct: 16 LLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRL 75
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK-------------- 130
++ +I N + G +EA F M E + ++ +K
Sbjct: 76 KNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVV 135
Query: 131 HGRVEES----MWYFERN-------PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
HG V MW P +N ++W + I G+VQNG + EA+++F ++ E G
Sbjct: 136 HGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEG 195
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V+P +VT SS A A + + G + G E ++ +SLI K+G ++ A
Sbjct: 196 VEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAE 255
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
SVF RM ++DVV+W +++ ++++G++ +A + M N SV +A +
Sbjct: 256 SVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMR 315
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
+L ++ Y + N +V+S++ + A + V I KD+ + N ++
Sbjct: 316 NLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLA 375
Query: 360 LYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KR 414
+++ G + + L + +E +V+SWNS+I G+ +GQ+ EAK++F M +
Sbjct: 376 AFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQP 435
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
N V+W+ +ISG F M +G PN + VL A ++ASL+ G+ LH
Sbjct: 436 NLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALH 495
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
G +I+ + + T+L D YAK GD + ++RVFD +PDK + M+ G A G A
Sbjct: 496 GYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAV 555
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++ L+ +++ + P+ +T + L+ACSH+ +V +GL+ F M +NI P+ HY C+
Sbjct: 556 EALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCM 615
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
V +LSR G L EA I++MP++PD SLL+ C+ + ++ E L KL ++
Sbjct: 616 VSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQLLKLQPDNS 675
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YV +SN YA+AGRW + VR+LM E+GLRK GCSW++V +++ F +P+
Sbjct: 676 GNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFVAGDKSHPE 733
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 197/567 (34%), Positives = 296/567 (52%), Gaps = 65/567 (11%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F++ P ++V W I G+ G EAL L+ + +G+ P+ TF + ++CA ++
Sbjct: 85 FDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSAL 144
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
R G V I K GF+ V V +SL+ + + GE T+ +++
Sbjct: 145 REGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGE-------------------TLGMEL- 184
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+F EM RN VSW+ +IA Y Q+ Y +E +FR+M +PN
Sbjct: 185 -----------VFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLV 233
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VL A A L+ L G +H + +K+G++ DV ++NALI LY KCG + R +FD +V
Sbjct: 234 SVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMV-- 291
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
V ++VSWN+MI Y N A +LF M E FD +
Sbjct: 292 -VQNLVSWNAMIAAYEQNNAGANAVKLFRRMQA--------------EKVDFDYI----- 331
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
T SV+ A AS+ +L G+ +H + + G +V + AL D YAK G
Sbjct: 332 ------------TMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCG 379
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+I+ +R VF+R+P ++ +SWT M+ A G+ ++++ LF M+ + PN T +V
Sbjct: 380 NIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFT 439
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
AC HSGLV++G K+F SM Y+I P H C+VD+L R+G L EA +FI+ MP EPD
Sbjct: 440 ACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDV 499
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
+ W +LL C+ + N ++AE + L+ L + YVL+SNIYA AGRW DA +RKLM
Sbjct: 500 SVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLM 559
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKT 707
E+ L+K G S VEV + H F +
Sbjct: 560 EERELKKIPGHSLVEVNRRFHTFLSGS 586
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 193/384 (50%), Gaps = 39/384 (10%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR++FD+MP+R+ W+ +I Y +G EEA L+ M P+ F V+ + A
Sbjct: 81 ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L ALR G VH +++K G + DVF+ ++L+ +YS+ GET LVF +V V ++VSW
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMV---VRNIVSW 197
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++I +GY++++ F VF EM+ SG
Sbjct: 198 TAVI-------------------------------AGYVQNRYFKEGLGVFREMVGSGTQ 226
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN T SVL A A + L GK +HG IKLG DV L AL Y K G++E++R +
Sbjct: 227 PNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSL 286
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M +N +SW M+ ++ ++ LF M+ + + +T++SV+ AC+ G +
Sbjct: 287 FDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGAL 346
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ G ++ + + ++ N ++DM ++ G + A + +P +W S++
Sbjct: 347 NTG-RWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCR-SVVSWTSMIG 404
Query: 629 GCKTYKNEQIAERAVKNLWKLAEE 652
C ++ + E A+K ++ +E
Sbjct: 405 ACASHGH---GEDALKLFSRMKDE 425
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/554 (26%), Positives = 236/554 (42%), Gaps = 123/554 (22%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE- 74
SFN Y+ C L D++ +H ++ G + L+T+L+I +++
Sbjct: 31 SFN-YLLNCCSSLPDLSR---------IHALVVTNGCGQNLLLSTKLIITACCLAPTMDY 80
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PE--------RNEVS 120
A ++ + D+ + N +I G EEA L+ M P+ R+
Sbjct: 81 ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140
Query: 121 WTALISG------FMKHGR-----VEESM--------------WYFERNPFQNVISWTAA 155
+AL G +KHG V+ S+ F +N++SWTA
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAV 200
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I G+VQN + E L +F +++ SG +PN VT S+ ACA + LG + G K G
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ VS+ N+LI L K G V+ ARS+FD M +++VS
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVS----------------------- 297
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
W+ MIA Y Q+ A +LFR+M + V+SA ASL AL +G
Sbjct: 298 --------WNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTG 349
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H V + G+E +V I+NALID+Y+KCG R VF+ + + VVSW SMIG
Sbjct: 350 RWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRS---VVSWTSMIGAC 406
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+G E+A +LF M G PN TF+
Sbjct: 407 ASHGHGEDALKLFSRMKDE-------------------------------GVKPNSFTFA 435
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGDIESSRRVFDR 511
+V A +E+G+ +++ Y + G + D ++G + + D+
Sbjct: 436 AVFTACRHSGLVEEGRKHFESMMR---DYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDK 492
Query: 512 MPDKNEIS-WTVMV 524
MP + ++S W ++
Sbjct: 493 MPVEPDVSVWGALL 506
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 159/309 (51%), Gaps = 26/309 (8%)
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
++S +I L M+ A+++FD MPKR+ W+ +I GY + + A+++ M
Sbjct: 62 LLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHG 121
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+G P+ TF V+ + A +++L +GK++H I+K GF DVF+ ++L Y++SG+
Sbjct: 122 AGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLG 181
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
VF M +N +SWT ++ G ++ Y KE + +F EM + PN +T++SVL AC+
Sbjct: 182 MELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACA- 240
Query: 565 SGLVDKGLKYFNSMEPI--YNIK----PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
GL++ N + I Y IK P+ ++ + + G + A + M +
Sbjct: 241 ------GLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQ- 293
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKL-AEEHPAGYV-LLSNIYASA-------GR 669
+ +W ++++ Y+ AVK ++ AE+ Y+ ++S I A A GR
Sbjct: 294 NLVSWNAMIAA---YEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGR 350
Query: 670 WIDAMNVRK 678
W+ + RK
Sbjct: 351 WMHELVKRK 359
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 143/303 (47%), Gaps = 9/303 (2%)
Query: 118 EVSWT-ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+VS T ALI+ + K G VE + F+ QN++SW A I + QN A+KLF ++
Sbjct: 263 DVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQ 322
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
V + +T S+ ACA + G + L+ + G E +VS+ N+LI + K G +D
Sbjct: 323 AEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNID 382
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF----DEMPERNEVSWSVMIARYN 292
LAR VF+R+ R VVSWT ++ G +A ++F DE + N +++ +
Sbjct: 383 LAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACR 442
Query: 293 QSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
SG EE + F M R YS P + ++ L +L M + + K+ +E DV
Sbjct: 443 HSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSL---MEAYEFIDKMPVEPDV 499
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ AL+ + LV + + D V + M Y G+ E+A L M
Sbjct: 500 SVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLM 559
Query: 412 PKR 414
+R
Sbjct: 560 EER 562
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 52/255 (20%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
L RK LE N + + N +I+ + GN++ A+ +F+ +P R+ VSWT++I
Sbjct: 355 LVKRKGLEIN----------VSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIG 404
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
HG E +ALKLF ++ + GVKPN T
Sbjct: 405 ACASHGHGE-------------------------------DALKLFSRMKDEGVKPNSFT 433
Query: 187 FSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
F+++ AC G F ++ V C ++ L + G + A D+M
Sbjct: 434 FAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKM 493
Query: 246 E-KRDVVSWTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQSGYPE 298
+ DV W +L +E+ +L A ++F P+ V++ V+++ Y ++G E
Sbjct: 494 PVEPDVSVWGALLGSCRIHSNLELAEL-VAEKLFLLDPQ--TVTFYVLMSNIYAEAGRWE 550
Query: 299 EAFRLFRQMTRYSFK 313
+A RL + M K
Sbjct: 551 DAARLRKLMEERELK 565
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 295/549 (53%), Gaps = 39/549 (7%)
Query: 162 NGFSFEALKLFLKLLESGV-KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+G L L+ LL SG +P+ +TF + KACA + ++ G + + + G + V
Sbjct: 102 HGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVF 161
Query: 221 VCNSLIT-LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N+ LS++ G + +ARR+FD P R
Sbjct: 162 VVNAATHFLSIR--------------------------------GPMEDARRLFDRSPVR 189
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS--FKPNTSCFSIVLSALASLKALRSGMH 337
+ VSW+ +I Y + G P EA LF +M +P+ +S ++ L G
Sbjct: 190 DLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRR 249
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+H V G+ V + NAL+D+Y KCG + + VF+ I + V VSW +MI G+
Sbjct: 250 LHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTV---VSWTTMIVGFAK 306
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
G M++A+++FD MP+R+ W+A+++GY++ KQ ++F+EM + +P++ T ++
Sbjct: 307 FGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNL 366
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L A + + +LE G +H I K + V LGT+L D YAK G+IE + +F +P+KN
Sbjct: 367 LTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNA 426
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
++WT M+ GLA G+A E+I F M + P+E+T + VL AC H+GLV +G ++F+
Sbjct: 427 LTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSL 486
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
ME Y+++ +HY+C++D+L R+G L EAE +N+MP EPD+ W ++ C+ N
Sbjct: 487 METKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNIS 546
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVR 697
+ E+A L ++ YVLL+N+YA A A VR +M G+ K GCS +E+
Sbjct: 547 LGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELN 606
Query: 698 NQVHFFFQK 706
VH F K
Sbjct: 607 GVVHEFIVK 615
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 220/434 (50%), Gaps = 44/434 (10%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL--ESGVKPNEVTFSS 189
G +E++ F+R+P ++++SW I G+V+ G EAL+LF +++ ++ V+P+EVT +
Sbjct: 174 GPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIA 233
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
C ++ D LG + G + G V + N+L+ + +K G +++A+SVF+R+E R
Sbjct: 234 AVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRT 293
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
VVSWT ++ F + G + +AR++FDEMPER+ W+ ++ Y Q +EA LF +M
Sbjct: 294 VVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQE 353
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
S P+ +L+A + L AL GM VH ++ K + V + +LID+Y+KCG +
Sbjct: 354 ASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEK 413
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+F I EK+ ++W +MI G +G EA +EH
Sbjct: 414 AIHIFKEIPEKN---ALTWTAMICGLANHGHANEA----------------------IEH 448
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFL 488
F M+ G+ P++ TF VL A +++G++ + K +
Sbjct: 449 ---------FRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKH 499
Query: 489 GTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEE--MEK 545
+ + D ++G ++ + ++ + MP + + + W + G +I+L E+ M+
Sbjct: 500 YSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQG----NISLGEKAAMKL 555
Query: 546 TSITPNELTILSVL 559
I P++ I +L
Sbjct: 556 VEIDPSDSGIYVLL 569
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 156/333 (46%), Gaps = 65/333 (19%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ I+ G+LE A+ +F+ + R VSWT +I GF K G ++++ F+ P ++V
Sbjct: 267 NALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVF 326
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
W A + G+VQ EAL LF ++ E+ V P+E+T ++ AC+++ +G+ V I
Sbjct: 327 PWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYI 386
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
EKH R VF V T ++D++ + G++ +A
Sbjct: 387 -----EKH--------------------RLVFS------VALGTSLIDMYAKCGNIEKAI 415
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
IF E+PE+N ++W+ MI G+ EA FR M KP+ F VLSA
Sbjct: 416 HIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACC--- 472
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
HA ++K G E + ETK +E+ + H ++
Sbjct: 473 --------HAGLVKEGRE------------FFSLMETK-------YHLERKMKH---YSC 502
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRND-VSWSAI 422
MI G G ++EA++L + MP D V W AI
Sbjct: 503 MIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAI 535
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/491 (35%), Positives = 278/491 (56%), Gaps = 2/491 (0%)
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V N LI + +G D AR FD + +D V W ++ + G L EARR+ + PERN
Sbjct: 140 VANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERN 199
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ +IA Y+++G P +A F M +P+ LSA + LK L G +H
Sbjct: 200 VVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHL 259
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
V K I+ + LID+Y+KCG+ + VFD++ WN +I GY G
Sbjct: 260 LVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPE--PWNVIIDGYCKLGH 317
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
++ A+ LFD M R+ ++++++I+GY+ + +F ++ G + T S+L A
Sbjct: 318 VDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTA 377
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
AS+ +L +G+ LH I + DV+L TAL D Y K G ++ + VF RM +++ +W
Sbjct: 378 CASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTW 437
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
+ M+ GLA +G +++ F +M++ P +T ++VL ACSHS L+++G ++FN M
Sbjct: 438 SAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRS 497
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
++ + P HY C++D+L+RSG L EA + +MP +P++ WAS+LS C+ +KN +A
Sbjct: 498 LHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLAR 557
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
A ++L KLA E A YV L NIY + +W++A +R LM E+G++K+ G S + V QV
Sbjct: 558 HAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQV 617
Query: 701 HFFFQKTDHNP 711
H F +P
Sbjct: 618 HKFVVNDQSHP 628
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 217/446 (48%), Gaps = 55/446 (12%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+V N +I+ G ++A+R FD +P ++ V W +I G ++ G ++E+ + P +
Sbjct: 139 IVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 198
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV+SWT+ I G+ + G +A+ F +L GV+P+EV AC+++ + G +
Sbjct: 199 NVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLH 258
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDL 266
L+ K + + +LI + K G++ A++VFD + + + W VI+D + ++G +
Sbjct: 259 LLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHV 318
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR +FD+M R+ ++++ MI Y SG +A +LF Q+ R+ + + +L+A
Sbjct: 319 DIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTAC 378
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
ASL AL G +HA + + +E+DV++ AL+D+Y KCG + VF + E+DV
Sbjct: 379 ASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVH--- 435
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+W++MI G NG +A E F M KR+ G
Sbjct: 436 TWSAMIAGLAFNGMGMDALESFCQM-KRD------------------------------G 464
Query: 447 EIPNKSTFSSVLCASASVASLEKGKD----------LHGKIIKLGFPYDVFLGTALTDTY 496
P T+ +VL A + + L +G+ LH +I G + D
Sbjct: 465 FQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYG---------CMIDLL 515
Query: 497 AKSGDIESSRRVFDRMP-DKNEISWT 521
A+SG ++ + + MP N + W
Sbjct: 516 ARSGLLDEAMHLVQTMPMQPNAVIWA 541
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 208/683 (30%), Positives = 333/683 (48%), Gaps = 82/683 (12%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
K + + N +I G A GH+ KE + R ++ + LE + I F V
Sbjct: 121 KTVVTWNALIAGYAQVGHV------KEAFALFRQMV-----DEGLEPSIIT-----FLSV 164
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ C A + WG AQ + G + TAL+S ++K G ++++ F+ ++
Sbjct: 165 LDACSSPAGLNWGKEVHAQVVTAGFVSDFRIG-TALVSMYVKGGSMDDARQVFDGLHIRD 223
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V ++ + G+ ++G +A +LF ++ + G+KPN+++F SI C G +V
Sbjct: 224 VSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHA 283
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
AG + V SLI + + G +
Sbjct: 284 QCMNAGLVDDIRVATSLIRM-------------------------------YTTCGSIEG 312
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARR+FD M R+ VSW+VMI Y ++G E+AF LF M +P+ + +++A A
Sbjct: 313 ARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAI 372
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L +H+ V G D+ +S AL+ +Y+KCG KD
Sbjct: 373 SANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKD------------------- 413
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
A+++FD MP+R+ VSWSA+I Y+E+ F F+ M S
Sbjct: 414 ---------------ARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIE 458
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ T+ ++L A + +L+ G +++ + IK V LG AL AK G +E +R +
Sbjct: 459 PDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYI 518
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M ++ I+W M+ G + G A+E++ LF+ M K PN +T + VL ACS +G V
Sbjct: 519 FDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFV 578
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
D+G ++F + I P + Y C+VD+L R+G L EAE I SMP +P S+ W+SLL
Sbjct: 579 DEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLV 638
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ + N +AERA + + A YV LS++YA+AG W + VRK+M +G+RK
Sbjct: 639 ACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKE 698
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
GC+W+EV +VH F + +P
Sbjct: 699 QGCTWIEVAGKVHTFVVEDRSHP 721
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 151/562 (26%), Positives = 261/562 (46%), Gaps = 105/562 (18%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ LN ++L N +I GN+ EA+++FD + + V+W ALI+G+ + G V+
Sbjct: 88 RQLNIYEL---NTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVK---- 140
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
EA LF ++++ G++P+ +TF S+ AC+
Sbjct: 141 ---------------------------EAFALFRQMVDEGLEPSIITFLSVLDACSSPAG 173
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G V + AGF + +L+++ +K G +D AR VFD + RDV ++
Sbjct: 174 LNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTF------ 227
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+VM+ Y +SG E+AF LF +M + KPN F
Sbjct: 228 -------------------------NVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISF 262
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+L + +AL G VHA + G+ D+ ++ +LI +Y+ CG + R VFD++
Sbjct: 263 LSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKV 322
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+D VVSW MI GY NG +E+A F +F
Sbjct: 323 RD---VVSWTVMIEGYAENGNIEDA-------------------------------FGLF 348
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M G P++ T+ ++ A A A+L +++H ++ GF D+ + TAL YAK
Sbjct: 349 ATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKC 408
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G I+ +R+VFD MP ++ +SW+ M+ E+GY E+ F M++++I P+ +T +++L
Sbjct: 409 GAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLL 468
Query: 560 FACSHSGLVDKGLKYFNSM--EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
AC H G +D G++ + + + P G ++ M ++ G + A ++M
Sbjct: 469 NACGHLGALDVGMEIYTQAIKADLVSHVPLG---NALIIMNAKHGSVERARYIFDTM-VR 524
Query: 618 PDSNAWASLLSGCKTYKNEQIA 639
D W +++ G + N + A
Sbjct: 525 RDVITWNAMIGGYSLHGNAREA 546
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 209/454 (46%), Gaps = 67/454 (14%)
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
+L E G + T+ + + C E+ D LG V I + G + ++ N+LI L G
Sbjct: 47 RLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICG 106
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
V AR +FD +E + VV+W ++ A Y Q
Sbjct: 107 NVTEARQIFDSVENKTVVTWNALI-------------------------------AGYAQ 135
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G+ +EAF LFRQM +P+ F VL A +S L G VHA V+ G D I
Sbjct: 136 VGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRI 195
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
AL+ +Y K G D R VFD + +DV+ ++N M+GGY +G E+A ELF M +
Sbjct: 196 GTALVSMYVKGGSMDDARQVFDGLHIRDVS---TFNVMVGGYAKSGDWEKAFELFYRMQQ 252
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
G PNK +F S+L + +L GK +
Sbjct: 253 -------------------------------VGLKPNKISFLSILDGCWTPEALAWGKAV 281
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H + + G D+ + T+L Y G IE +RRVFD M ++ +SWTVM+ G AE+G
Sbjct: 282 HAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNI 341
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+++ LF M++ I P+ +T + ++ AC+ S ++ + +S I + T
Sbjct: 342 EDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA-REIHSQVDIAGFGTDLLVSTA 400
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+V M ++ G + +A ++MP D +W++++
Sbjct: 401 LVHMYAKCGAIKDARQVFDAMP-RRDVVSWSAMI 433
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 146/295 (49%), Gaps = 36/295 (12%)
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G V H+++ G + +++ N LI LYS CG + R +FDS+ K VV+WN++I G
Sbjct: 76 GKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKT---VVTWNALIAG 132
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y G ++EA FA+F +M+ G P+ TF
Sbjct: 133 YAQVGHVKEA-------------------------------FALFRQMVDEGLEPSIITF 161
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
SVL A +S A L GK++H +++ GF D +GTAL Y K G ++ +R+VFD +
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHI 221
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ ++ VMV G A+SG +++ LF M++ + PN+++ LS+L C + G K
Sbjct: 222 RDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWG-KA 280
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ + + R T ++ M + G + A ++M D +W ++ G
Sbjct: 281 VHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEG 334
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 300/560 (53%), Gaps = 36/560 (6%)
Query: 140 YFERNPFQ--NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+F N Q ++ W I G ++ +A+ + + G++ + +TF + K+CA +
Sbjct: 67 HFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARV 126
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+D R G V K GFE ++ V N+LI +
Sbjct: 127 SDVRQGQMVRVHSMKLGFESYLFVSNALIHM----------------------------- 157
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
++ G+L A+++FD M ER+ VSW+ +I Y Q ++ LFR+M + + ++
Sbjct: 158 --YVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSV 215
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+SA L G ++ ++ + G+ D+++ N LID+Y + G VF +
Sbjct: 216 TMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQM 275
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
EK++ VSWN+MI GY G + AK+LF+ MP R+ +SW+++I GY KQ
Sbjct: 276 KEKNI---VSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVK 332
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+F EM++S P++ T ++ L A A + SL+ G+ +H I K DVF+G +L D Y
Sbjct: 333 LFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYC 392
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G +E + +VF+ M ++ +SWT ++ GLA +G+A+ ++N+F++M K I P T +
Sbjct: 393 KCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVG 452
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL AC+H GLVDKG+++F SME Y + P +HY CVVD+L RSG L A +FI MP
Sbjct: 453 VLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIV 512
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
PD W LLS CK + N +AE K L L + YVL S+ YA + RW D + +R
Sbjct: 513 PDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIR 572
Query: 678 KLMTEKGLRKSGGCSWVEVR 697
KLM L+K S +EVR
Sbjct: 573 KLMEVTNLQKPCAYSSIEVR 592
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 207/435 (47%), Gaps = 72/435 (16%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
GF+ L V N +I+ + +G L AQ++FDGM ER+
Sbjct: 143 GFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERD------------------------ 178
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
V+SW + ICG+ Q + L LF ++ V+ + VT A ++++
Sbjct: 179 -------VVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWE 231
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + I + G + + N+LI + + G +D A VF +M+++++VSW ++ +
Sbjct: 232 MGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYA 291
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
++G+L A+++F+EMP R+ +SW+ MI Y+ + EA +LF++M KP+ +
Sbjct: 292 KVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVAT 351
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
LSA A L +L +G VH ++ K I+ DVF+ N+LID+Y KCG + VF+ + +D
Sbjct: 352 ALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRD 411
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
VSW S+I G +NG E A +FD +
Sbjct: 412 ---SVSWTSIISGLAVNGFAESALNVFD-------------------------------Q 437
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF---PYDVFLGTALTDTYAK 498
ML G P TF VL A A V ++KG + H K ++ + P G + D +
Sbjct: 438 MLKEGICPTHGTFVGVLLACAHVGLVDKGVE-HFKSMENTYRLAPEMKHYG-CVVDLLCR 495
Query: 499 SGDIESSRRVFDRMP 513
SG ++ + +MP
Sbjct: 496 SGYLDMAYNFIKKMP 510
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 175/395 (44%), Gaps = 67/395 (16%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L +A +F+++ + W+ MI ++S P +A + M + + F + +
Sbjct: 63 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKS 122
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A + +R G V H +K+G E +F+SNALI +Y GE + VFD ++E+D V
Sbjct: 123 CARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERD---V 179
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWNS+I GY + +F V +F EM
Sbjct: 180 VSWNSII-------------------------------CGYYQFNRFKKVLDLFREMQAI 208
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
+ T + A+ ++ E G L I + G D++LG L D Y + G I+ +
Sbjct: 209 NVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFA 268
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESG----------------------------YAK--- 534
RVF +M +KN +SW M+ G A+ G AK
Sbjct: 269 GRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHA 328
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++ LF+EM + + P+E+T+ + L AC+H G +D G + + ++IK + +
Sbjct: 329 EAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDIKSDVFVGNSL 387
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+DM + G + +A N M DS +W S++SG
Sbjct: 388 IDMYCKCGVVEKALQVFNDMKTR-DSVSWTSIISG 421
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 166/385 (43%), Gaps = 58/385 (15%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE-ANEIVKDLNGFDLVVHNCMINANI 98
G L ++ + G+ + YL L+ MY G R ++ A + + ++V N MI
Sbjct: 233 GDYLVKYIDEHGVVVDLYLGNTLIDMY-GRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYA 291
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGF---MKHGRVEESMWYFERNPFQNVISWTAA 155
+ GNL A++LF+ MP R+ +SWT++I G+ +H
Sbjct: 292 KVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHA----------------------- 328
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
EA+KLF +++ S VKP+E+T ++ ACA + G +V I K
Sbjct: 329 -----------EAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDI 377
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ V V NSLI + K G V+ A VF+ M+ RD VSWT I+ G A +FD+
Sbjct: 378 KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQ 437
Query: 276 MPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLK 330
M + ++ ++ G ++ F+ M Y P + V+ L
Sbjct: 438 MLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLC--- 494
Query: 331 ALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
RSG A+ + K+ I DV I L+ S C G LV IV K + +
Sbjct: 495 --RSGYLDMAYNFIKKMPIVPDVVIWRILL---SAC--KLHGNLVLAEIVSKKLLVLDPS 547
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPK 413
N+ G Y L+ + +D++ K
Sbjct: 548 NN--GNYVLSSSTYAGSDRWDDVIK 570
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 122/259 (47%), Gaps = 9/259 (3%)
Query: 387 SWNSMIGGYGLNGQ-MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
S + +I Y L+ Q + +A +F+ + + + W+ +I G + + + +N M
Sbjct: 48 SISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYK 107
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + TF + + A V+ + +G+ + +KLGF +F+ AL Y G++ +
Sbjct: 108 GIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMA 167
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC--- 562
++VFD M +++ +SW ++ G + K+ ++LF EM+ ++ + +T++ + A
Sbjct: 168 QKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFL 227
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
S + D +KY + + ++ ++DM R G + A M E + +
Sbjct: 228 SEWEMGDYLVKYIDEHGVVVDLYLG----NTLIDMYGRRGMIDFAGRVFYQMK-EKNIVS 282
Query: 623 WASLLSGCKTYKNEQIAER 641
W +++ G N A++
Sbjct: 283 WNAMIMGYAKVGNLVAAKK 301
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 20/256 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTG------IHKERYLTTRLLIMYLGSRKSLEA----NEI 78
K+I S N +I G A G+L+ ++ T ++I Y +++ EA E+
Sbjct: 278 KNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEM 337
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS----WTALISGFMKHGRV 134
+ + D + ++A G+L+ + + D + + + S +LI + K G V
Sbjct: 338 MVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVV 397
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
E+++ F ++ +SWT+ I G NGF+ AL +F ++L+ G+ P TF + AC
Sbjct: 398 EKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLAC 457
Query: 195 AEINDFRLGLSVFGLI---FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDV 250
A + G+ F + ++ E C ++ L + G +D+A + +M DV
Sbjct: 458 AHVGLVDKGVEHFKSMENTYRLAPEMKHYGC--VVDLLCRSGYLDMAYNFIKKMPIVPDV 515
Query: 251 VSWTVILDVFIEMGDL 266
V W ++L G+L
Sbjct: 516 VIWRILLSACKLHGNL 531
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD-IESSRRVFD 510
STFS A ++ SL K+LH ++++ D + + YA S + + VF+
Sbjct: 12 STFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFN 71
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
++ + W M+ GL++S ++I+ + M I + LT + + +C+ V +
Sbjct: 72 QIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQ 131
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
G M ++++K Y V + M G L+ A+ + M E D +W S+
Sbjct: 132 G-----QMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGM-LERDVVSWNSI 185
Query: 627 LSG 629
+ G
Sbjct: 186 ICG 188
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/635 (29%), Positives = 304/635 (47%), Gaps = 106/635 (16%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G D ++ N +I+ + G L+ A +F GM +RN
Sbjct: 249 GSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRN-------------------------- 282
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRL 202
V+SWTA + GF+Q+G + L+L ++ S PNE T S+ KAC D
Sbjct: 283 -----VVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGA 337
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G+ + GL + G+E+H V +SL+ L K G +
Sbjct: 338 GVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRI--------------------------- 370
Query: 263 MGDLGEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY------SFKPN 315
G+ARR+FD R +W+ MI+ Y +G+ +A +FR+M R +P+
Sbjct: 371 ----GDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPD 426
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIE--KDVFISNALIDLYSKCGETKDGRLV 373
F+ +L A L A R G VHA + G + ++ AL+D+Y KCG
Sbjct: 427 EFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCG-------- 478
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
++ A ++F+ + ++N + W+ ++ G+ + Q
Sbjct: 479 --------------------------RLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVM 512
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+F SG + SS++ A A +E+G+ +H +K DV G ++
Sbjct: 513 EALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIV 572
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D Y K G + + R+F +P +N +SWT M+ GL + G +E++ +FEEM + P+E+
Sbjct: 573 DMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEV 632
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T L++L ACSH+GLVD+ +YF+ + ++P HY C+VD+L R+G L EA D I +
Sbjct: 633 TYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRT 692
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP EP W +LLS C+ +K+ + A L + ++P YV LSN++A AG W +
Sbjct: 693 MPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWREC 752
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
VR M +GL+K GGCSWVE+ +VHFF+ D
Sbjct: 753 HKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGD 787
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 197/450 (43%), Gaps = 71/450 (15%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+ + +A A+ + R G+ + G + K GF + N+LI + K GE+D+A VF M
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
R+VVSWT ++ F++ GD R+ EM +E +
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAA----------------------- 316
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
PN S L A + + +G+ +H ++ G E+ ++++L+ LYSK G
Sbjct: 317 -------PNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGR 369
Query: 367 TKDGRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
D R VFD + + +A +WN+MI GY G +A +F M
Sbjct: 370 IGDARRVFDCAGLGRGLA---TWNAMISGYAHAGHGRDALLVFREM--------RRRRRR 418
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF--P 483
+ + Q P++ TF+S+L A + + +G +H + GF
Sbjct: 419 HEDQHQ-----------------PDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTA 461
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+ L AL D Y K G + + +VF+R+ KN I WT +V G A+ G E++ LF
Sbjct: 462 SNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRF 521
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK-PNGRHYTC---VVDMLS 599
++ + + S++ + LV++G + Y +K P G + +VDM
Sbjct: 522 WRSGARADAHVLSSIVGVLADFALVEQGRQVH-----CYGVKSPAGTDVSAGNSIVDMYL 576
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ G EAE +P + +W ++++G
Sbjct: 577 KCGLPDEAERMFREIPAR-NVVSWTTMING 605
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 188/458 (41%), Gaps = 69/458 (15%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E + ++ ++ C C+ +D+ + G +HG ++TG + + + L+++Y +
Sbjct: 319 EYTLSASLKAC-CVTEDMGA------GVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIG 371
Query: 74 EANEIVKDLN-GFDLVVHNCMINANIQWGNLEEAQRLFD--------------------- 111
+A + G L N MI+ G+ +A +F
Sbjct: 372 DARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFA 431
Query: 112 ---------GMPER-----------------NEVSWTALISGFMKHGRVEESMWYFERNP 145
G P N + AL+ ++K GR+ +M FER
Sbjct: 432 SLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLE 491
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N I WT + G Q G EAL+LF + SG + + SSI A+ G
Sbjct: 492 RKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQ 551
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V K+ VS NS++ + LK G D A +F + R+VVSWT +++ + G
Sbjct: 552 VHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGL 611
Query: 266 LGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFS 320
EA +F+EM E +EV++ +++ + +G +E R F + R + +P ++
Sbjct: 612 GREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYA 671
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD---GRLVFDSI 377
++ L LR + + + +E V + L+ S C KD GR D +
Sbjct: 672 CMVDLLGRAGELREARDL---IRTMPMEPTVGVWQTLL---SACRVHKDVAVGREAGDVL 725
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+ D + V++ ++ + G E ++ D M +R
Sbjct: 726 LAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRG 763
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ + +L ASA +SL G LHG + KLGF D LG L D YAK G+++ + VF
Sbjct: 216 RRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVF 275
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACS----- 563
M D+N +SWT ++ G + G A + L EM S PNE T+ + L AC
Sbjct: 276 GGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDM 335
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
+G+ GL E Y + + +V + S+ GR+ +A + W
Sbjct: 336 GAGVGIHGLCVRTGYEEHYVVASS------LVLLYSKGGRIGDARRVFDCAGLGRGLATW 389
Query: 624 ASLLSG 629
+++SG
Sbjct: 390 NAMISG 395
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 326/601 (54%), Gaps = 17/601 (2%)
Query: 106 AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
A L G ++++ L+ + K G V + F+ P N WTA I GF +N
Sbjct: 24 AHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQY 83
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
A F+K+ + P T +S+ KA + + + G V+GL + G+E + V N +
Sbjct: 84 ENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVM 143
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I L ++ GE+ AR +FD ME+RD VSW ++ + G + AR++FD M ERN +SW+
Sbjct: 144 IELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWT 203
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
MI Y ++G EA LF +M + + + + +++SA S+ L + ++ ++
Sbjct: 204 SMIQGYVKAGDLLEARVLFERMP----EKDLASWKVMVSAYMSVGNLVAA----RNLFEL 255
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
DV N +I K GE + FD + E++VA SW +I GY G ++ A+
Sbjct: 256 MPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVA---SWVMIIDGYIKVGDVDAAR 312
Query: 406 ELFDNMPKRNDVSWSAIISGYLE--HKQFDL-VFAVFNEMLLSGEIPNKSTFSSVLCASA 462
+FD MP++N V+WS +I GY + H L ++ F E G P+++ ++ A +
Sbjct: 313 SVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKE---QGIKPDETFALGIISACS 369
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
+ + + + + ++ + T+L D YAK G+IE + +VF+ + K+ ++
Sbjct: 370 QLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYST 429
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ A G ++++I+LF EM+K +I P+ + L VL AC+H GLV +G + F M Y
Sbjct: 430 VITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEY 489
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
I+P+ +HY C+VD+L R+G L EA I SMP P++ W +LLS C+ + N Q+AE A
Sbjct: 490 GIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAA 549
Query: 643 VKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHF 702
L+++ + YVLL NIYA AG+W D VR ++ E +RK+ G SW+E+ + +H
Sbjct: 550 ATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHE 609
Query: 703 F 703
F
Sbjct: 610 F 610
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 187/331 (56%), Gaps = 11/331 (3%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
FDLVV N MI ++ G + A+++FD M ER+ VSW ++I+G+ +GRV+ + F+R
Sbjct: 135 FDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRM 194
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+NVISWT+ I G+V+ G EA LF ++ E + +V S A + +
Sbjct: 195 EERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVS----AYMSVGNLVAAR 250
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++F L+ V N +I+ K GE+D A+ FDRM++R+V SW +I+D +I++G
Sbjct: 251 NLFELMPI----HDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVG 306
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
D+ AR +FD+MPE+N V+WS MI Y ++G+P + +L++ KP+ + ++S
Sbjct: 307 DVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIIS 366
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + L + V + + ++ + +LID+Y+KCG + VF+ + +KD+
Sbjct: 367 ACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLH- 425
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
++++I + +G E+A LF M K N
Sbjct: 426 --CYSTVITAFANHGLSEDAISLFSEMQKAN 454
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 156/326 (47%), Gaps = 16/326 (4%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
+++ S +IQG G L++ + ER L + + +V N F+L+
Sbjct: 197 RNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELM 256
Query: 89 -VH-----NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+H N MI+ + G ++ A+ FD M ERN SW +I G++K G V+ + F+
Sbjct: 257 PIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFD 316
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P +N+++W+ I G+ + G + +LKL+ E G+KP+E I AC+++
Sbjct: 317 QMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDT 376
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
SV ++ V SLI + K G ++ A VF+ ++++D+ ++ ++ F
Sbjct: 377 AESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFAN 436
Query: 263 MGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTS 317
G +A +F EM + N V++ ++ N G E RLFRQM Y +P+
Sbjct: 437 HGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEK 496
Query: 318 CFSIVLSALASLKALRSGMHVHAHVL 343
++ ++ L R+G AH L
Sbjct: 497 HYACMVDILG-----RAGCLEEAHSL 517
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 312/626 (49%), Gaps = 70/626 (11%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNE-----VSWTALISGFMKHGRVEESMWYFERNPFQ 147
++ A Q ++E +RL + + + V T +I+ + G +S F++ +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGLSV 206
N+ W A + + +N +A+ +F +L+ + KP+ T + KACA + D LG +
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G+ K V V N+LI + K G V+ A
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEA---------------------------- 262
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+R+FD M + SW+ ++ Y Q+ P +A L+ QMT P+ +L A
Sbjct: 263 --VKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ +K+L G +H L+ G+ D FI +L+ LY CG+
Sbjct: 321 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPF------------------ 362
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
A+ LFD M R+ VSW+ +I+GY ++ D +F +ML G
Sbjct: 363 ----------------AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG 406
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P + V A + +++L GK+LH +K D+F+ +++ D YAK G I S+
Sbjct: 407 IQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQ 466
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
R+FDR+ +K+ SW V++ G G KE++ LFE+M + + P++ T +L ACSH+G
Sbjct: 467 RIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAG 526
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LV+ GL+YFN M ++NI+P HYTCVVDML R+GR+ +A I MP +PDS W+SL
Sbjct: 527 LVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSL 586
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
LS C+ + N + E+ L +L E P YVL+SN++A +G+W D VR M + GL+
Sbjct: 587 LSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQ 646
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNPK 712
K GCSW+EV +VH F + P+
Sbjct: 647 KDAGCSWIEVGGKVHNFLIGDEMLPE 672
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 218/534 (40%), Gaps = 118/534 (22%)
Query: 29 KDITSQNLVIQGRA----------LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI 78
K ++S N ++ G A L+ + +G+ + + T L++ KSL E
Sbjct: 273 KTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPD-WFTIGSLLLACSRMKSLHYGEE 331
Query: 79 VKDL---NGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ NG D + +++ I G AQ LFDGM R+ VSW +I+G
Sbjct: 332 IHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAG------ 385
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ QNG EA+ LF ++L G++P E+ +C A
Sbjct: 386 -------------------------YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGA 420
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C++++ RLG + KA + + V +S+I + K G + L++ +FDR+ ++DV SW
Sbjct: 421 CSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASW 480
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
VI IA Y G +EA LF +M R K
Sbjct: 481 NVI-------------------------------IAGYGIHGRGKEALELFEKMLRLGLK 509
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F+ +L A + HA +++ G+E N +++L++
Sbjct: 510 PDDFTFTGILMACS-----------HAGLVEDGLE----YFNQMLNLHN----------- 543
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQF 432
+E + H + ++ G G++++A L + MP D WS+++S H
Sbjct: 544 ----IEPKLEH---YTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNL 596
Query: 433 DLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
L V N++L L E P S L A + + + + G++ +G D G +
Sbjct: 597 GLGEKVANKLLELEPEKPENYVLISNLFAGS--GKWDDVRRVRGRMKDIGLQKDA--GCS 652
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+ K + + + + E +W + ++ GY ++ ++ ++E+
Sbjct: 653 WIEVGGKVHNFLIGDEMLPELEEVRE-TWRRLEVKISSIGYTPDTGSVLHDLEE 705
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 116/217 (53%), Gaps = 7/217 (3%)
Query: 354 SNALIDLYSKCGETKD---GRLVFD--SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
S A+ L CG+ KD GR + + S + V +I Y + G +++ +F
Sbjct: 105 SEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVF 164
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASL 467
D + ++N W+AI+S Y ++ F+ ++F+E++ ++ P+ T V+ A A + L
Sbjct: 165 DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDL 224
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS-RRVFDRMPDKNEISWTVMVRG 526
G+ +HG K+ DVF+G AL Y K G +E + +RVFD M K SW ++ G
Sbjct: 225 GLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCG 284
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
A++ +++++L+ +M + + P+ TI S+L ACS
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 321
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 251/464 (54%), Gaps = 28/464 (6%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A IF +P N W+ +I Y S PE A +F QM S P+ F+ L + S
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA----- 383
+ G +H HVLK G+ D+FI N LI LY+ CG +D R + D ++E+DV
Sbjct: 121 FSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180
Query: 384 -----------------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+V SWN MI GY G +EEA+ +F P +N VSW+
Sbjct: 181 LSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWN 240
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+I+GY +F V +F +M +G P+ T SVL A A V +L +G+ +H I K
Sbjct: 241 AMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKN 300
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G D F+ TAL D Y+K G IE + VF+ K+ +W ++ GL+ G + ++ +F
Sbjct: 301 GISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIF 360
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EM PNE+T + VL ACS +GL+D+G + FN M ++ I+P HY C+VD+L R
Sbjct: 361 SEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGR 420
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
G L EAE+ + MP + S W SLL C+ + N ++AER + L +L+ + + +V L
Sbjct: 421 VGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQL 480
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
SN+YAS GRW D M VR+ M +G+RK GCS +EV V+ F
Sbjct: 481 SNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFL 524
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 183/407 (44%), Gaps = 66/407 (16%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F R P N W I + + AL +F ++L + V P++ TF+ K+C +
Sbjct: 65 FSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGV 124
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + G + K G + + N+LI L G ++ AR + DRM +RDVVSW +L +
Sbjct: 125 EEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAY 184
Query: 261 IE-------------------------------MGDLGEARRIFDEMPERNEVSWSVMIA 289
E +G L EARR+F E P +N VSW+ MI
Sbjct: 185 AERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMIT 244
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y+ +G E LF M KP+ VLSA A + AL G VHA++ K GI
Sbjct: 245 GYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISI 304
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D F++ AL+D+YSKCG + VF+S + KD++ +WNS+I G +G + A
Sbjct: 305 DGFVATALVDMYSKCGSIEKALEVFNSCLRKDIS---TWNSIISGLSTHGSGQHA----- 356
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
+F+EML+ G PN+ TF VL A + L++
Sbjct: 357 --------------------------LQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDE 390
Query: 470 GKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
G+++ ++ + G + + D + G +E + + +MP K
Sbjct: 391 GREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQK 437
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 177/385 (45%), Gaps = 42/385 (10%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
LK S + V +GR +HGH++KTG+ + ++ L+ +Y +A ++ + D+
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDV 174
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V N +++A + G +E A LFD M ERN SW +ISG++ G +EE+ F P +
Sbjct: 175 VSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVK 234
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV+SW A I G+ G E L LF + +GVKP+ T S+ ACA + G V
Sbjct: 235 NVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVH 294
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
I K G V +L+ + K G ++ A VF+ ++D+ +W I
Sbjct: 295 AYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSI----------- 343
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
I+ + G + A ++F +M FKPN F VLSA +
Sbjct: 344 --------------------ISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACS 383
Query: 328 SLKALRSG-----MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L G + VH H GI+ + ++DL + G ++ + + +K+
Sbjct: 384 RAGLLDEGREMFNLMVHVH----GIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEA 439
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKEL 407
+ V W S++G +G +E A+ +
Sbjct: 440 S--VVWESLLGACRNHGNVELAERV 462
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HAH+LK G+ F ++ LI S+ A + +
Sbjct: 27 HAHILKSGLIHSTFAASRLI----------------ASVSTNSHAQAIPY---------- 60
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
A +F +P N W+ II Y + +F++ML + +P+K TF+ L
Sbjct: 61 -----AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFAL 115
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
+ S + +E+G+ +HG ++K G D+F+ L YA G IE +R + DRM +++ +
Sbjct: 116 KSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVV 175
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW ++ AE G + + +LF+EM + ++ I + GL+++ + F
Sbjct: 176 SWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGV----GLLEEARRVFGET 231
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FEPDSNAWASLLSGC 630
P+ N+ + ++ S +GR SE M +PD+ S+LS C
Sbjct: 232 -PVKNVVS----WNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSAC 281
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 96/225 (42%), Gaps = 12/225 (5%)
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL-----TDTYAKSGDIESSRRVFDR 511
+L + S+ + H I+K G + F + L T+++A++ I + +F R
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQA--IPYAHSIFSR 67
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+P+ N W ++R A S + ++ +F +M S+ P++ T L +C V++G
Sbjct: 68 IPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
+ + + + ++ + + G + +A ++ M E D +W +LLS
Sbjct: 128 RQIHGHVLKT-GLGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWNALLSA-- 183
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
Y + E A ++ E + + + + Y G +A V
Sbjct: 184 -YAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRV 227
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 36/136 (26%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL------------IMYLGSRKSL 73
CL KDI++ N +I G + HG +G H + + L+ ++ SR L
Sbjct: 332 CLRKDISTWNSIISGLSTHG----SGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGL 387
Query: 74 --EANEIVKDLNGFDLVVH-----------NCMINANIQWGNLEEAQRLFDGMPERN-EV 119
E E+ F+L+VH CM++ + G LEEA+ L MP++ V
Sbjct: 388 LDEGREM------FNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASV 441
Query: 120 SWTALISGFMKHGRVE 135
W +L+ HG VE
Sbjct: 442 VWESLLGACRNHGNVE 457
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 306/628 (48%), Gaps = 96/628 (15%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
FD +V N ++ ++G L +A +LF+ MP+ N V+W +I+GF
Sbjct: 106 FDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGF---------------- 149
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
VQNGF EA LF +++ +GV P+ +TF+S + E + G
Sbjct: 150 ---------------VQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGK 194
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ G I + G V + ++LI + K +V +A +F + D+V T I
Sbjct: 195 EIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAI-------- 246
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
I+ Y +G +A +FR + PN + VL
Sbjct: 247 -----------------------ISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLP 283
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A L L G +HA++LK G+++ + +A++D+Y+KCG +F + EKD
Sbjct: 284 ACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKD--- 340
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
V WN++I NG+ +EA +LF M + E +D V
Sbjct: 341 AVCWNAIITNCSQNGKPQEAIDLFRQMGR--------------EGLSYDCV--------- 377
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ S+ L A A++ +L GK +H +IK F +VF +AL D Y K G++
Sbjct: 378 --------SISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSV 429
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+R VFD M +KNE+SW ++ G+ + S+ LF +M + I P+ +T L++L AC H
Sbjct: 430 ARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGH 489
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+G VDKG++YF M Y I HY C+VD+ R+GRL+EA + I +MPF PD W
Sbjct: 490 AGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWG 549
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL C+ + N ++AE A + L L E+ YVLLSN++A AG+W +R LM ++G
Sbjct: 550 TLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRG 609
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K G SW+EV H F +P+
Sbjct: 610 VQKVPGYSWIEVNKTTHMFVAADGSHPE 637
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 34/227 (14%)
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+G D F+ ++LI LY++ G +D R +FD + KD V WN M+ G+ G+ A
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKD---CVLWNVMLNGFVKCGEPNSA 57
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
++F++M RN PN TF+SVL AS
Sbjct: 58 VKVFEDM--RN-----------------------------CQTKPNSITFASVLSICASE 86
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
A E G LHG +I GF +D + AL Y+K G + + ++F+ MPD N ++W M+
Sbjct: 87 ALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMI 146
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
G ++G+ E+ LF EM ++P+ +T S L + + S + +G
Sbjct: 147 AGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQG 193
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 45/326 (13%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L +T + QG+ +HG++++ GI + +L + L+ +Y R A +I K D
Sbjct: 180 FLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVD 239
Query: 87 LVVHNCMIN----------------------------------------ANIQWGNLEEA 106
+VV +I+ A + G A
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHA 299
Query: 107 QRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
L G+ ER V +A++ + K GR++ + F R P ++ + W A I QNG
Sbjct: 300 NILKHGLDERRHVG-SAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQ 358
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA+ LF ++ G+ + V+ S+ ACA + G ++ + K F+ V ++LI
Sbjct: 359 EAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALI 418
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEV 282
+ K G + +AR VFD M +++ VSW I+ + G L + +F +M E + V
Sbjct: 419 DMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHV 478
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMT 308
++ +++ +G ++ + FR MT
Sbjct: 479 TFLTILSACGHAGQVDKGIQYFRCMT 504
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 16/157 (10%)
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
+GF D F+G++L YA++G IE +RR+FD+MP+K+ + W VM+ G + G ++ +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-----TCV 594
FE+M PN +T SVL C+ L + G N + + + G H+ +
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFG----NQLHGL--VISCGFHFDPLVANAL 114
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSN--AWASLLSG 629
V M S+ G+LS+A N+M PD+N W +++G
Sbjct: 115 VAMYSKFGQLSDALKLFNTM---PDTNVVTWNGMIAG 148
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 201/652 (30%), Positives = 310/652 (47%), Gaps = 105/652 (16%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+K GR+ +++ F+R P +NV++WT+ + G+ +NG AL +F ++ESGV PN+
Sbjct: 58 LVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFAC 117
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGF--EKHVSVC----------------------- 222
++ ACA++ R G V L +AGF + + C
Sbjct: 118 NAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS 177
Query: 223 ------NSLITLSLKMGEVDLARSVFDRMEKR---------------------------- 248
SLI+ + GE +LA +M K+
Sbjct: 178 PDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYL 237
Query: 249 ---------DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
V S T ++D + G+ A+ +FD + +N VSW M+ Y + G EE
Sbjct: 238 IKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEE 297
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A ++F M PN SIVL A S+ G +H +K + D+ +SNAL+
Sbjct: 298 ALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLS 354
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+ YG G +EE + + + + + VSW
Sbjct: 355 M----------------------------------YGRTGLVEELEAMLNKIENPDLVSW 380
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+ IS ++ + A+ +M G PN FSSVL + A VASL++G H +K
Sbjct: 381 TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALK 440
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG ++ G AL + Y+K G + S+R FD M + SW ++ G A+ G A +++ +
Sbjct: 441 LGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEV 500
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F +M I P++ T L VL C+HSG+V++G +F M Y+ P HY C++DML
Sbjct: 501 FSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLG 560
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+GR EA IN MPFEPD+ W +LL+ CK ++N I + A L +L++ A YVL
Sbjct: 561 RNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVL 620
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+SNIYA G W DA VR+ M E G++K GCSW+E+ N+VH F + +P
Sbjct: 621 MSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHP 672
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 240/546 (43%), Gaps = 107/546 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V+ +N ++ G L +A LFD MP +N V+WT+++SG+ ++GR E
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPE---------- 96
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
AL +F ++ESGV PN+ ++ ACA++ R G
Sbjct: 97 ---------------------AALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQ 135
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V L +AGF + + LI + + G + A+ VFDRM+ DVV +T ++ F G+
Sbjct: 136 VHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGE 195
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
E A QM + KPN + +L+A
Sbjct: 196 F-------------------------------ELAAEALIQMLKQGLKPNEHTMTTILTA 224
Query: 326 LASLKALRSGMHVHAHVL-KIGIE-KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ G +H +++ KIG+ + V+ S ALID YS+ GE K + VFDS+ K+
Sbjct: 225 CPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKN-- 278
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VVSW SM+ Y +G++EEA VF +M+
Sbjct: 279 -VVSWCSMMQLYIRDGRLEEA-------------------------------LQVFGDMI 306
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G PN+ S VL A S+ G+ LH IK D+ + AL Y ++G +E
Sbjct: 307 SEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVE 363
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ +++ + + +SWT + ++G+ +++I L +M TPN SVL +C+
Sbjct: 364 ELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCA 423
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
+D+G++ F+ + +++M S+ G++ A + M D +W
Sbjct: 424 DVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVM-HTHDVTSW 481
Query: 624 ASLLSG 629
SL+ G
Sbjct: 482 NSLIHG 487
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 204/426 (47%), Gaps = 50/426 (11%)
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
E DVV L+ ++ G L +A +FD MP +N V+W+ +++ Y ++G PE A +F
Sbjct: 44 ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFA 103
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M PN + L A A L ALR+G VH+ ++ G D +I + LI++YS+CG
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCG 163
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ AKE+FD M + V ++++IS
Sbjct: 164 ----------------------------------SLPAAKEVFDRMDSPDVVGYTSLISA 189
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGF-P 483
+ + +F+L +ML G PN+ T +++L A V G+ +HG +IK +G
Sbjct: 190 FCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRS 245
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
V+ TAL D Y+++G+ + ++ VFD + KN +SW M++ G +E++ +F +M
Sbjct: 246 QSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDM 305
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ PNE + VL AC GL + + +++ + R ++ M R+G
Sbjct: 306 ISEGVDPNEFALSIVLGACGSIGLG----RQLHCSAIKHDLITDIRVSNALLSMYGRTGL 361
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLS 661
+ E E +N + PD +W + +S ++N E+A+ L ++ E P GY S
Sbjct: 362 VEELEAMLNKIE-NPDLVSWTTAISA--NFQN-GFGEKAIALLCQMHSEGFTPNGYAFSS 417
Query: 662 NIYASA 667
+ + A
Sbjct: 418 VLSSCA 423
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 215/524 (41%), Gaps = 107/524 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +H ++ G + ++ + L+ MY A E+ ++ D+V + +I+A +
Sbjct: 133 GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 192
Query: 100 WGNLEEA-----QRLFDGMPERNEV--------------------------------SWT 122
G E A Q L G+ S T
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSST 252
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI + ++G + + F+ +NV+SW + + ++++G EAL++F ++ GV P
Sbjct: 253 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 312
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NE S + AC I LG + K + V N+L+++ + G V+ ++
Sbjct: 313 NEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAML 369
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+++E D+VS W+ I+ Q+G+ E+A
Sbjct: 370 NKIENPDLVS-------------------------------WTTAISANFQNGFGEKAIA 398
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L QM F PN FS VLS+ A + +L GM H LK+G + ++ NALI++YS
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYS 458
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ RL FD + D V SWNS+I G+ +G +A E
Sbjct: 459 KCGQMGSARLAFDVMHTHD---VTSWNSLIHGHAQHGDANKALE---------------- 499
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLG 481
VF++M +G P+ STF VL +E+G+ +I +
Sbjct: 500 ---------------VFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYS 544
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
F + D ++G + + R+ + MP + + + W ++
Sbjct: 545 FTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLL 588
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 194/461 (42%), Gaps = 58/461 (12%)
Query: 38 IQGRALHGHLIKT-GIHKER-YLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
+ G+ +HG+LIK G+ + Y +T L+ Y + + A + L+ ++V M+
Sbjct: 228 VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQ 287
Query: 96 ANIQWGNLEEAQRLFDGM----PERNEVSWT----------------------------- 122
I+ G LEEA ++F M + NE + +
Sbjct: 288 LYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIR 347
Query: 123 ---ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
AL+S + + G VEE + +++SWT AI QNGF +A+ L ++ G
Sbjct: 348 VSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEG 407
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
PN FSS+ +CA++ G+ L K G + + N+LI + K G++ AR
Sbjct: 408 FTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSAR 467
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSG 295
FD M DV SW ++ + GD +A +F +M + ++ ++ ++ N SG
Sbjct: 468 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 527
Query: 296 YPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
EE FR M +YSF P S ++ ++ L + + + + E D I
Sbjct: 528 MVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRM---INDMPFEPDALIW 584
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM--- 411
L+ G+L D ++E S+ M Y ++G+ E+A+++ M
Sbjct: 585 KTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDET 644
Query: 412 --PKRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEML 443
K SW I S + H D ++ + E++
Sbjct: 645 GVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELV 685
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 293/543 (53%), Gaps = 16/543 (2%)
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
++ + G + TF + +ACA + F LG ++ G + + GF+ H+ V N LI + K+G
Sbjct: 32 RMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLG 91
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIA 289
+ AR +FDRM R +SW ++ + D A IF M E N V+W+ +I+
Sbjct: 92 RMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLIS 151
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y +SG+ EEA LF M + + ++V+S A L A +H + +K G E+
Sbjct: 152 SYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEE 211
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
F+ +ALI +Y K G+ +F + K +A SWN++I + G +EA E+F
Sbjct: 212 YSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLA---SWNALITSHAEAGLCDEALEIFS 268
Query: 410 NMPKRND--------VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+ + D VSWSAII G+ + +F M + + N T S+VL
Sbjct: 269 QLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLC 328
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A +A+L G+++HG +++ ++ +G L + YAK G ++ +F++ K+ ISW
Sbjct: 329 AELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWN 388
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M+ G G ++ F++M K P+ +T ++VL +CSHSGLV +G + F+ M
Sbjct: 389 SMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKK 448
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
Y I+P HY C+VD+L R+G L EA + + +MP P++ W +LL+ C+ + N +IAE
Sbjct: 449 YRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEE 508
Query: 642 AVKNLWKLAEEHPAG-YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
+L+ L+ G Y+LLSNIYA++GRW D+ VR KGL+K+ G SW++V V
Sbjct: 509 TASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEKNV 568
Query: 701 HFF 703
+ F
Sbjct: 569 YTF 571
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 196/403 (48%), Gaps = 50/403 (12%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
I G+ +HGH+++ G ++ L+ MY
Sbjct: 59 ILGKTIHGHVLEMGFQSHLHVGNELIGMY------------------------------- 87
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ----NVISWT 153
+ G + +A+ LFD M R+ +SW ++S + + ++ F+R + N+++WT
Sbjct: 88 AKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWT 147
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
+ I + ++G+ EA++LF + GV+ + + + CA++ F + K
Sbjct: 148 SLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKG 207
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF 273
GFE++ V ++LI + K G+V+ A ++F M+ + + SW ++ E G EA IF
Sbjct: 208 GFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIF 267
Query: 274 DEMPER--------NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
++ N VSWS +I + G +EA LFR+M N S VLS
Sbjct: 268 SQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSL 327
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L AL G +H HV++ + ++ + N L+++Y+KCG K+G ++F+ KD +
Sbjct: 328 CAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKD---L 384
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIIS 424
+SWNSMI GYG++G A E FD M K + V++ A++S
Sbjct: 385 ISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLS 427
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 160/371 (43%), Gaps = 50/371 (13%)
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
R+M + + F +V+ A A + + G +H HVL++G + + + N LI +Y+K
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWS 420
G +D R +FD + V +SWN+M+ Y N A E+F M N V+W+
Sbjct: 91 GRMRDARHLFDRM---SVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWT 147
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
++IS Y + +F M + G + + V+ A + + + K +H +K
Sbjct: 148 SLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKG 207
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF F+ +AL Y K GD+ + +F M +K+ SW ++ AE+G E++ +F
Sbjct: 208 GFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIF 267
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
++E++ P ++PN ++ ++D +
Sbjct: 268 SQLERSGDCP--------------------------------RLRPNVVSWSAIIDGFAS 295
Query: 601 SGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
GR EA + M ++ +++LS C AE A +L + H
Sbjct: 296 KGREKEALELFRRMQHAKILANAVTISTVLSLC--------AELAALHLGREIHGHVVRA 347
Query: 658 VLLSNIYASAG 668
V+++NI G
Sbjct: 348 VMVNNILVGNG 358
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 13/246 (5%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF---ERNP-----FQNVISW 152
G++ A LF M ++ SW ALI+ + G +E++ F ER+ NV+SW
Sbjct: 227 GDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSW 286
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
+A I GF G EAL+LF ++ + + N VT S++ CAE+ LG + G + +
Sbjct: 287 SAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVR 346
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
A ++ V N L+ + K G + +F++ E++D++SW ++ + G A
Sbjct: 347 AVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALET 406
Query: 273 FDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALA 327
FD+M + + V++ +++ + SG E RLF QM +Y +P ++ ++ L
Sbjct: 407 FDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLG 466
Query: 328 SLKALR 333
LR
Sbjct: 467 RAGLLR 472
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 297/576 (51%), Gaps = 64/576 (11%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ K G ++ ++ F++ +N++SWT+ I GF N EAL F ++ G +
Sbjct: 120 YSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFAL 179
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
SS+ +AC + + G V L+ K GF + V ++L
Sbjct: 180 SSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLT--------------------- 218
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
D++ + G+L +A + F+EMP ++ V W+ MI + ++G ++A + +M
Sbjct: 219 ----------DMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKM 268
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
+ LSA ++LKA G +HA +LK+G E + FI NAL D+YSK G+
Sbjct: 269 VTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDM 328
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
VF + D +VS +AII GY+
Sbjct: 329 VSASNVFQ--IHSDCISIVSL-------------------------------TAIIDGYV 355
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
E Q + + F ++ G PN+ TF+S++ A A+ A LE G LHG+++K F D F
Sbjct: 356 EMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPF 415
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ + L D Y K G + S ++FD + + +EI+W +V ++ G + +I F M
Sbjct: 416 VSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRG 475
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ PN +T +++L CSH+G+V+ GL YF+SME IY + P HY+CV+D+L R+G+L EA
Sbjct: 476 LKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEA 535
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
EDFIN+MPFEP+ W S L CK + + + A+ A L KL E+ +VLLSNIYA
Sbjct: 536 EDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKE 595
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+W D ++RK++ + + K G SWV++RN+ H F
Sbjct: 596 KQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVF 631
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 208/459 (45%), Gaps = 70/459 (15%)
Query: 172 FLK-LLESGVKPNEV-TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
FLK L SG K ++ T + + + A + G + ++ + G + + N + L
Sbjct: 61 FLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLY 120
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
K GE+D +FD+M +R++VSWT I+ F EA F +M E++
Sbjct: 121 SKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIA------ 174
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
T+++ S VL A SL A++ G VH V+K G
Sbjct: 175 ------------------TQFA-------LSSVLQACTSLGAIQFGTQVHCLVVKCGFGC 209
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
++F+ + L D+YSKCGE D F+ + KD V W SMI G+ NG ++A
Sbjct: 210 ELFVGSNLTDMYSKCGELSDACKAFEEMPCKD---AVLWTSMIDGFVKNGDFKKA----- 261
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
++ Y+ +M+ ++ S L A +++ +
Sbjct: 262 -------------LTAYM-------------KMVTDDVFIDQHVLCSTLSACSALKASSF 295
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLA 528
GK LH I+KLGF Y+ F+G ALTD Y+KSGD+ S+ VF D I S T ++ G
Sbjct: 296 GKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYV 355
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
E +++++ F ++ + I PNE T S++ AC++ ++ G + + +N K +
Sbjct: 356 EMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVK-FNFKRDP 414
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ +VDM + G + + + PD AW +L+
Sbjct: 415 FVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLV 452
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 62/368 (16%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+T + ++ A K L G +HA +++ G + F+SN ++LYSKCGE
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGE-------- 125
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
++ +LFD M +RN VSW++II+G+ + +F
Sbjct: 126 --------------------------LDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQE 159
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+ F +M + GEI + SSVL A S+ +++ G +H ++K GF ++F+G+ LTD
Sbjct: 160 ALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTD 219
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K G++ + + F+ MP K+ + WT M+ G ++G K+++ + +M + ++
Sbjct: 220 MYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHV 279
Query: 555 ILSVLFACS-----------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ S L ACS H+ ++ G +Y + + DM S+SG
Sbjct: 280 LCSTLSACSALKASSFGKSLHATILKLGFEYETFIG------------NALTDMYSKSGD 327
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLS 661
+ A N D + SL + Y E+A+ L P + S
Sbjct: 328 MVSAS---NVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTS 384
Query: 662 NIYASAGR 669
I A A +
Sbjct: 385 LIKACANQ 392
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 186/441 (42%), Gaps = 74/441 (16%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+VK G +L V + + + + G L +A + F+ MP ++ V WT++I GF+K+G +
Sbjct: 202 VVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFK-- 259
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+AL ++K++ V ++ S AC+ +
Sbjct: 260 -----------------------------KALTAYMKMVTDDVFIDQHVLCSTLSACSAL 290
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD-RMEKRDVVSWTVI 256
G S+ I K GFE + N+L + K G++ A +VF + +VS T I
Sbjct: 291 KASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAI 350
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+D ++EM + E+A F + R +PN
Sbjct: 351 IDGYVEMDQI-------------------------------EKALSTFVDLRRRGIEPNE 379
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F+ ++ A A+ L G +H V+K ++D F+S+ L+D+Y KCG +FD
Sbjct: 380 FTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDE 439
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQF 432
I D ++WN+++G + +G A E F+ M R N V++ ++ G
Sbjct: 440 IENPD---EIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMV 496
Query: 433 DLVFAVFNEM-LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+ F+ M + G +P + +S V+ L++ +D I + F +VF +
Sbjct: 497 EDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDF---INNMPFEPNVFGWCS 553
Query: 492 LTDTYAKSGDIESSRRVFDRM 512
GD+E ++ D++
Sbjct: 554 FLGACKIHGDMERAKFAADKL 574
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 436 FAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F+ + SG ++ + T + ++ A L KGK LH +I+ G + FL +
Sbjct: 59 FSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLN 118
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K G+++ + ++FD+M +N +SWT ++ G A + +E+++ F +M +
Sbjct: 119 LYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFA 178
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC-------VVDMLSRSGRLSEA 607
+ SVL AC+ G + F + +K + C + DM S+ G LS+A
Sbjct: 179 LSSVLQACTSLGAIQ-----FGTQVHCLVVKCG---FGCELFVGSNLTDMYSKCGELSDA 230
Query: 608 EDFINSMPFEPDSNAWASLLSG 629
MP + D+ W S++ G
Sbjct: 231 CKAFEEMPCK-DAVLWTSMIDG 251
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 118/285 (41%), Gaps = 54/285 (18%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK-DLNGFDLVVHNCMINANI 98
G++LH ++K G E ++ L MY S + A+ + + + +V +I+ +
Sbjct: 296 GKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYV 355
Query: 99 QWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEES--------MWYFERNPF 146
+ +E+A F + R NE ++T+LI ++E + F+R+PF
Sbjct: 356 EMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPF 415
Query: 147 ---------------------------QNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+ I+W + F Q+G A++ F ++ G
Sbjct: 416 VSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRG 475
Query: 180 VKPNEVTFSSICKACAEINDFRLGLS-------VFGLIFKAGFEKHVSVCNSLITLSLKM 232
+KPN VTF ++ K C+ GL+ ++G++ K E+H S +I L +
Sbjct: 476 LKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPK---EEHYSC---VIDLLGRA 529
Query: 233 GEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
G++ A + M + +V W L GD+ A+ D++
Sbjct: 530 GKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKL 574
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/631 (30%), Positives = 309/631 (48%), Gaps = 69/631 (10%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F ++ C +Q G L G+ VS TAL+ + K G + ++ F
Sbjct: 110 FPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVS-TALLHMYAKCGHLYQAQTLFNSI 168
Query: 145 PFQN--VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
Q+ +++W A I F + + + ++ ++GV PN T SI + N
Sbjct: 169 SHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQ 228
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G ++ + F FD +VV T +LD++ +
Sbjct: 229 GKAIHAYYIRNFF--------------------------FD-----NVVLQTALLDMYAK 257
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSI 321
L AR+IF+ + ++N+V WS MI Y +A L+ M Y P + +
Sbjct: 258 CHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLAT 317
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+L A A L L+ G +H H++K G++ D + N+LI +Y+KC
Sbjct: 318 MLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKC----------------- 360
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
G M+ A D M ++ VS+SAIISG +++ + +F +
Sbjct: 361 -----------------GIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQ 403
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M SG P T ++L A + +A+L+ G HG + GF D + A+ D Y+K G
Sbjct: 404 MQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGK 463
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
I SR +FDRM +++ ISW M+ G G E+++LF+E++ + P+++T+++VL A
Sbjct: 464 ITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSA 523
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSHSGLV +G +F+SM +NIKP HY C+VD+L+R+G L EA FI MPF P+
Sbjct: 524 CSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVR 583
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LL+ C+T+KN ++ E+ K + L E +VL+SNIY+S GRW DA +R +
Sbjct: 584 IWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQR 643
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G +KS GCSWVE+ +H F +P+
Sbjct: 644 HHGYKKSPGCSWVEISGVIHVFIGGHQSHPQ 674
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/545 (23%), Positives = 244/545 (44%), Gaps = 85/545 (15%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVS-----WTALISGFMKHGRVEESMWYFERNPFQNVISW 152
I W R F P + VS T L + ++ + F++ P +V+ W
Sbjct: 16 INWRQRHRQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLW 75
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
I + +G +++ L+L +L+ GV P TF + KAC+ + +LG +
Sbjct: 76 NMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHI 135
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
G + V +L+ + K G + A+++F+ + +D
Sbjct: 136 LGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD----------------------- 172
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
R+ V+W+ MIA ++ + QM + PN+S +L + AL
Sbjct: 173 ------RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANAL 226
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G +HA+ ++ +V + AL+D+Y+KC R +F+++ +K+ V W++MI
Sbjct: 227 HQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKN---DVCWSAMI 283
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
GGY L+ + +A L+D+M + + G P +
Sbjct: 284 GGYVLHDSISDALALYDDM------------------------------LCIYGLNPTPA 313
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T +++L A A + L++GK LH +IK G D +G +L YAK G ++++ D M
Sbjct: 314 TLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM 373
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG- 571
K+ +S++ ++ G ++GYA++++ +F +M+ + I P T++++L ACSH + G
Sbjct: 374 IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGT 433
Query: 572 -------LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
++ F + I N ++DM S+ G+++ + + + M D +W
Sbjct: 434 CCHGYTVVRGFTNDTSICN---------AIIDMYSKCGKITISREIFDRMQ-NRDIISWN 483
Query: 625 SLLSG 629
+++ G
Sbjct: 484 TMIIG 488
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 182/377 (48%), Gaps = 47/377 (12%)
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
I ++ AR +FD++P+ + V W++MI Y SG +++ L+ M + P F
Sbjct: 52 ISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFP 111
Query: 321 IVLSALASLKALRSG--MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+L A +SL+AL+ G +H HAH+L G+ D+++S AL+ +Y+KCG + +F+SI
Sbjct: 112 FLLKACSSLQALQLGRLIHTHAHIL--GLSMDLYVSTALLHMYAKCGHLYQAQTLFNSIS 169
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+D R+ V+W+A+I+ + H
Sbjct: 170 HQD--------------------------------RDIVAWNAMIAAFSFHALHAQTIHS 197
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+M +G PN ST S+L +L +GK +H I+ F +V L TAL D YAK
Sbjct: 198 VAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAK 257
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTILS 557
+ +R++F+ + KN++ W+ M+ G +++ L+++M + P T+ +
Sbjct: 258 CHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLAT 317
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINS 613
+L AC+ + +G K M IK T V + M ++ G + A F++
Sbjct: 318 MLRACAQLTDLKRGKKLHCHM-----IKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDE 372
Query: 614 MPFEPDSNAWASLLSGC 630
M D+ ++++++SGC
Sbjct: 373 M-IAKDTVSYSAIISGC 388
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 177/470 (37%), Gaps = 115/470 (24%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L I N + QG+A+H + I+ L T LL MY A +I +
Sbjct: 212 TLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTV 271
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM---------P------------------- 114
N + V + MI + ++ +A L+D M P
Sbjct: 272 NKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRG 331
Query: 115 ------------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
+ + +LIS + K G ++ ++ + + ++ +S++A I G VQN
Sbjct: 332 KKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQN 391
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
G++ +AL +F ++ SG+ P T ++ AC+ + + G G GF S+C
Sbjct: 392 GYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSIC 451
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N++I + K G++ ++ R IFD M R+ +
Sbjct: 452 NAIIDMYSKCGKITIS-------------------------------REIFDRMQNRDII 480
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ MI Y G EA LF+++ KP+ VLSA
Sbjct: 481 SWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSAC---------------- 524
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGL 397
S G +G+ F S+ ++ +AH + M+
Sbjct: 525 -------------------SHSGLVTEGKYWFSSMSQNFNIKPRMAHYI---CMVDLLAR 562
Query: 398 NGQMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDLVFAVFNEMLLSG 446
G ++EA MP +V W A+++ HK ++ V ++ L G
Sbjct: 563 AGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLG 612
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 319/611 (52%), Gaps = 40/611 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P ++ ++W + +Q+G +A+KLF + SG K + T + + C+ F
Sbjct: 583 FDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGF 642
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + G + + GFE +VS+CNSLI + + G+++ +R VF+ M R++ SW I+ +
Sbjct: 643 AQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSY 702
Query: 261 IEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+G + +A + DEM + + V+W+ +++ Y +A + +++ KPNT
Sbjct: 703 TRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNT 762
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
S S +L A+ ++ G +H +V++ + DV++ LID+Y K G R+VFD
Sbjct: 763 SSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDM 822
Query: 377 IVEKDV--------------------------------AHVVSWNSMIGGYGLNGQMEEA 404
+ EK++ ++ V+WNS++ GY G+ E+A
Sbjct: 823 MDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKA 882
Query: 405 KELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ M K N VSW+AI+SG ++ F +F +M G PN +T SS+L
Sbjct: 883 LAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRI 942
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
++ L GK++H +K D + TAL D YAKSGD++S+ +F + +K SW
Sbjct: 943 LGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASW 1002
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ G A +E I +F M + I P+ +T SVL C +SGLV +G KYF+ M
Sbjct: 1003 NCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRS 1062
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
Y + P H +C+V++L RSG L EA DFI +MP +PD+ W + LS CK +++ ++AE
Sbjct: 1063 HYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAE 1122
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
A K L L + A Y+++ N+Y++ RW D +R M+ +R SW+++ V
Sbjct: 1123 IAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTV 1182
Query: 701 HFFFQKTDHNP 711
H F+ + +P
Sbjct: 1183 HIFYAEGKAHP 1193
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 163/605 (26%), Positives = 284/605 (46%), Gaps = 83/605 (13%)
Query: 78 IVKDLNGFDL-VVHNCMINANIQWGNLEEAQRL-FDGMPERNEVSWTALISGFMKHGRVE 135
++K ++ F+L + C+I +++G A + F G P RN+VSW + G VE
Sbjct: 447 MMKLIDRFELEFISKCLITRYLEFGEFGYASAVFFLGFP-RNQVSWRDFLEKAEDFG-VE 504
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
+ ++ L+ F++L GV +EV + + + CA
Sbjct: 505 K-----------------------------YKVLEEFVRLQNKGVNFDEVVLAMVFRICA 535
Query: 196 EINDFRLGLSVFGLIFKAGFEK-HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ LG ++ G + K G + V ++L+ + +DLA +FD M KRD ++W
Sbjct: 536 VLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWN 595
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
I+ V + QSG E+A +LFR M K
Sbjct: 596 EIVMVNL-------------------------------QSGNWEKAVKLFRVMRFSGAKA 624
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
S +L ++ + G +H +VL++G E +V + N+LI +YS+ G+ + R VF
Sbjct: 625 YDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVF 684
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHK 430
+S+V+++++ SWNS++ Y G +++A L D M K + V+W++++SGY
Sbjct: 685 NSMVDRNLS---SWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKA 741
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
AV + ++G PN S+ SS+L A ++ GK +HG +I+ YDV++ T
Sbjct: 742 LSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVET 801
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
L D Y K+G + +R VFD M +KN ++W ++ GL+ +G KE+ L MEK I
Sbjct: 802 TLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKS 861
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
N +T S++ + G +K L M+ ++PN +T ++ S++G
Sbjct: 862 NAVTWNSLVSGYATWGKTEKALAVVGKMKK-NGVEPNVVSWTAILSGCSKNGNFGNGLKI 920
Query: 611 INSMPFE---PDSNAWASLLS--GCKT--YKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
M E P+S +SLL GC + Y +++ +KN L + L+ ++
Sbjct: 921 FLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKN--NLTRDAHVATALV-DM 977
Query: 664 YASAG 668
YA +G
Sbjct: 978 YAKSG 982
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 148/653 (22%), Positives = 266/653 (40%), Gaps = 149/653 (22%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF + + +Y T + LL+ +++ QGR +HG++++ G + L++MY
Sbjct: 613 LFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMY- 671
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
SR G LE ++++F+ M +RN SW +++S
Sbjct: 672 -SRN-----------------------------GKLESSRKVFNSMVDRNLSSWNSIVSS 701
Query: 128 FMKHGRVEESMWYFERNPF----QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ + G V+++M + ++++W + + G+ S +A+ + ++ +G+KPN
Sbjct: 702 YTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPN 761
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ SS+ +A E +LG ++ G + + V V +LI + +K G + AR VFD
Sbjct: 762 TSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 821
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEE 299
M+++++V+W ++ G L EA + M + N V+W+ +++ Y G E+
Sbjct: 822 MMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEK 881
Query: 300 A-----------------------------------FRLFRQMTRYSFKPNTSCFSIVLS 324
A ++F +M PN++ S +L
Sbjct: 882 ALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLR 941
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
L L L SG VH+ LK + +D ++ AL+D+Y+K G+ + +F I K +A
Sbjct: 942 ILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLA- 1000
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
SWN MI GY + + EE AVFN ML
Sbjct: 1001 --SWNCMIMGYAMFRRGEEG-------------------------------IAVFNAMLE 1027
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+G P+ TF+SVL + +++ G+ Y +
Sbjct: 1028 AGIEPDAITFTSVLSVCKNSG-----------LVREGWKY-----------------FDL 1059
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS- 563
R + +P S MV L SGY E+ + M + P+ + L +C
Sbjct: 1060 MRSHYGVIPTIEHCS--CMVELLGRSGYLDEAWDFIRTM---PLKPDATIWGAFLSSCKI 1114
Query: 564 HSG--LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
H L + K +EP N +Y ++++ S R + E NSM
Sbjct: 1115 HRDLELAEIAWKRLQVLEP-----HNSANYMMMINLYSNLNRWGDVERIRNSM 1162
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 128/313 (40%), Gaps = 42/313 (13%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T LL+ + +L+ G+ +H +K + ++ ++ T L+ MY S A EI +
Sbjct: 935 TISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGI 994
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESM 138
L NCMI + EE +F+ M E + +++T+++S G V E
Sbjct: 995 KNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGW 1054
Query: 139 WYFERNPFQNVISWTAAICGFV-----QNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
YF+ + T C + ++G+ EA F++ + +KP+ + + +
Sbjct: 1055 KYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWD-FIRTMP--LKPDATIWGAFLSS 1111
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL-----KMGEVDLARSVF--DRME 246
C D L + + E H S N ++ ++L + G+V+ R+ +R+
Sbjct: 1112 CKIHRDLELAEIAWKRL--QVLEPHNS-ANYMMMINLYSNLNRWGDVERIRNSMSNNRVR 1168
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+D+ SW I G+A P+ E+ + E ++L +
Sbjct: 1169 VQDLWSWIQIDQTVHIFYAEGKAH------PDEGEIYF--------------ELYKLVSE 1208
Query: 307 MTRYSFKPNTSCF 319
M + + P+T C
Sbjct: 1209 MKKSGYMPDTRCI 1221
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 268/469 (57%), Gaps = 30/469 (6%)
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKA 331
F +M N ++ MI + GYP A + + M S P + FS ++ A + A
Sbjct: 191 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 250
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV--------- 382
+ G VH H+ K G E +F+ AL+D YSK + R VFD + E+D
Sbjct: 251 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSA 310
Query: 383 -------------------AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
+ +WN+MI GY G +E A+ LF+ MP ++ +SW+ +I
Sbjct: 311 LARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMI 370
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+ Y ++KQ+ A+++EM L+G IP++ T S+V A A + +LE GK++H ++ G
Sbjct: 371 TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLN 430
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
DV++G+AL D YAK G ++ S +F ++ DKN W ++ GLA GYA++++ +F M
Sbjct: 431 LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM 490
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
E+ I PN +T +S+L AC+H+GLVD+G F SM Y+I+P+ RHY C+VDMLS+SG
Sbjct: 491 EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 550
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L+EA + I SM FEP+S W +LL+GCK + N +IAE AV+ L L + Y LL ++
Sbjct: 551 LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSM 610
Query: 664 YASAGRWIDAMNVRKLMTEKGL-RKSGGCSWVEVRNQVHFFFQKTDHNP 711
YA W++ ++R +M EKG+ +K G SW+E+ +H F D +P
Sbjct: 611 YAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHP 659
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 232/538 (43%), Gaps = 111/538 (20%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY----FERNPFQNVISWTAAIC 157
+ E L M + N + L+ F+ S+ Y F + NV + A I
Sbjct: 148 TINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIK 207
Query: 158 GFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
GFV G+ F AL+ ++ +LE S V P TFSS+ KAC + LG V I+K GFE
Sbjct: 208 GFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFE 267
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
H+ V +L+ K+ + AR VFD M +RD +WT ++ +GD+ AR++F+EM
Sbjct: 268 SHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEM 327
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQM------------TRYS------------- 311
PERN +W+ MI Y + G E A LF QM T YS
Sbjct: 328 PERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYS 387
Query: 312 ------FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
P+ S V SA A + AL G +H +V+ G+ DV+I +AL+D+Y+KCG
Sbjct: 388 EMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCG 447
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
L+F + +K+ + WN++I G ++G E+A +F M +R +
Sbjct: 448 SLDLSLLIFFKLTDKN---LYCWNAVIEGLAVHGYAEKALRMFAIM-EREKI-------- 495
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
+PN TF S+L A +++G+
Sbjct: 496 ----------------------MPNGVTFISILSACTHAGLVDEGRSR------------ 521
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
FL S R +D PD + MV L++SGY E++ L + ME
Sbjct: 522 -FL---------------SMTRDYDIRPDIRH--YGCMVDMLSKSGYLNEALELIKSME- 562
Query: 546 TSITPNELTILSVLFACSHSG---LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
PN + ++L C G + + ++ +EP+ N HY +V M +
Sbjct: 563 --FEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPM-----NSGHYNLLVSMYAE 613
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 203/460 (44%), Gaps = 38/460 (8%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L+K T V G+ +H H+ K G ++ T L+ Y EA ++ ++ D
Sbjct: 241 LVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERD 300
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
M++A + G+++ A++LF+ MPERN +W +I G+ + G VE + F + P
Sbjct: 301 AFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPT 360
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+++ISWT I + QN +AL ++ ++ +G+ P+EVT S++ ACA I LG +
Sbjct: 361 KDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEI 420
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ G V + ++L+ + K G +DL+ +F ++ +++ W +++
Sbjct: 421 HHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIE-------- 472
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
G A GY E+A R+F M R PN F +LSA
Sbjct: 473 GLAVH-----------------------GYAEKALRMFAIMEREKIMPNGVTFISILSAC 509
Query: 327 ASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ G + + I D+ ++D+ SK G + + S+ E + +
Sbjct: 510 THAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSM-EFEPNSI 568
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDN---MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+ W +++ G L+G E A++ + + N ++ ++S Y E K + + A M
Sbjct: 569 I-WGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDW-MEVAHIRSM 626
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+ + K SS + ++ D H K+ F
Sbjct: 627 MKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYF 666
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 212/706 (30%), Positives = 352/706 (49%), Gaps = 110/706 (15%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H +K G+ + T L+ MY+ + + + ++ ++V ++ A
Sbjct: 112 GRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLL-AGYS 170
Query: 100 WGNLEE------AQRLFDG-MPERNEVS-------------------------------- 120
W L Q ++G +P R VS
Sbjct: 171 WNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIP 230
Query: 121 -WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+ +LIS + + G + ++ F++ ++ ++W + I G+V+NG E ++F K+ +G
Sbjct: 231 VFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAG 290
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
VKP +TF+S+ K+CA + + L + K+GF V +L+ K E+D A
Sbjct: 291 VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDAL 350
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
S+F ME+ +N VSW+ MI+ Q+G ++
Sbjct: 351 SLFSLMEE------------------------------GKNVVSWTAMISGCLQNGGNDQ 380
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A LF QM R KPN +S +L+ S MH A V+K E+ + AL+D
Sbjct: 381 AVNLFSQMRREGVKPNHFTYSAILTV--HYPVFVSEMH--AEVIKTNYERSSSVGTALLD 436
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
Y K G T D VF+ I EAK+L ++W
Sbjct: 437 AYVKLGNTIDAVKVFEII-------------------------EAKDL---------MAW 462
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS-VASLEKGKDLHGKII 478
SA+++GY + + + +F++++ G PN+ TFSSV+ A AS A+ E+GK H I
Sbjct: 463 SAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAI 522
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
K+ + + +AL YAK G+I+S+ VF R +++ +SW M+ G ++ G AK+++
Sbjct: 523 KMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALE 582
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
+F+EM+K ++ + +T + V+ AC+H+GLV+KG KYFNSM ++I P +HY+C++D+
Sbjct: 583 VFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLY 642
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
SR+G L +A IN MPF P + W +LL + ++N ++ E A + L L E A YV
Sbjct: 643 SRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYV 702
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
LLSN+YA+AG W + NVRKLM ++ ++K G SW+EV+N+ + F
Sbjct: 703 LLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFL 748
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 189/394 (47%), Gaps = 66/394 (16%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EAL LF+ LL S ++P+E T S + CA D +LG V K G HVSV SL+
Sbjct: 76 EALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLV 135
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ +K V+ R VFD M +R+VVSWT +L
Sbjct: 136 DMYMKTENVNDGRRVFDEMGERNVVSWTSLL----------------------------- 166
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
A Y+ +G + LF QM PN S V++AL + + G+ VHA V+K G
Sbjct: 167 --AGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG 224
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
E+ + + N+LI LYS+ G +D R VFD + +D V+WNSMI GY NGQ E
Sbjct: 225 FEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRD---WVTWNSMIAGYVRNGQDLE--- 278
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
VF +FN+M L+G P TF+SV+ + AS+
Sbjct: 279 ----------------------------VFEIFNKMQLAGVKPTHMTFASVIKSCASLRE 310
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD-KNEISWTVMVR 525
L K + K +K GF D + TAL +K +++ + +F M + KN +SWT M+
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMIS 370
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G ++G +++NLF +M + + PN T ++L
Sbjct: 371 GCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL 404
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 167/371 (45%), Gaps = 51/371 (13%)
Query: 269 ARRIFDEMPERNEV--SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A +FD++P R + ++ Y++ +EA LF + S +P+ S S V +
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A + G VH +K G+ V + +L+D+Y K DGR VFD + E++ VV
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN---VV 160
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SW S++ GY NG + GY V+ +F +M G
Sbjct: 161 SWTSLLAGYSWNG-----------------------LYGY--------VWELFCQMQYEG 189
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
+PN+ T S+V+ A + + G +H ++K GF + + +L Y++ G + +R
Sbjct: 190 VLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDAR 249
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS--- 563
VFD+M ++ ++W M+ G +G E +F +M+ + P +T SV+ +C+
Sbjct: 250 DVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLR 309
Query: 564 HSGLVD----KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
LV K LK + + I T ++ LS+ + +A + M +
Sbjct: 310 ELALVKLMQCKALKSGFTTDQIV--------ITALMVALSKCKEMDDALSLFSLMEEGKN 361
Query: 620 SNAWASLLSGC 630
+W +++SGC
Sbjct: 362 VVSWTAMISGC 372
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 26/297 (8%)
Query: 404 AKELFDNMPKRNDV--SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
A LFD +P R + ++ Y KQ +F +L S P++ST S V
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A + G+ +H + +K G V +GT+L D Y K+ ++ RRVFD M ++N +SWT
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY------- 574
++ G + +G LF +M+ + PN T+ +V+ A + G+V GL+
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 575 -FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
F P++N ++ + SR G L +A D + M D W S+++G
Sbjct: 224 GFEEAIPVFN---------SLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIAG--YV 271
Query: 634 KNEQIAER-AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
+N Q E + N +LA P S I + A + + + KLM K L KSG
Sbjct: 272 RNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCAS--LRELALVKLMQCKAL-KSG 325
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 11 INP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
I P E +F+S I C + QG+ H + IK ++ +++ L+ MY
Sbjct: 490 IKPNEFTFSSVINAC------ASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKR 543
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN----EVSWTALI 125
A+E+ K DLV N MI+ Q G ++A +FD M +RN V++ +I
Sbjct: 544 GNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVI 603
Query: 126 SGFMKHGRVEESMWYF 141
+ G VE+ YF
Sbjct: 604 TACTHAGLVEKGQKYF 619
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 259/440 (58%), Gaps = 5/440 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLS 324
L +ARR FD+ P R+ +S ++A + S PE L R+M + + +P+ + + S
Sbjct: 52 LPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALRPDHFVLASLAS 111
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L++LR G +HAH D + ++LID+Y KCG +D R VFDSI V +
Sbjct: 112 AAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSI---GVKN 168
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
V W ++I GY NG EA +LF +MP +W+A+ISG+++ + +F EM
Sbjct: 169 SVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEMRR 228
Query: 445 SG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
I + ++V+ +A +A+L G+ LHG +++LGF + +G AL D Y+K DI
Sbjct: 229 DDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSDIH 288
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
S+R VF+ + ++ ISWT ++ G A+ G A+E L+ M + PNE+T + +++ACS
Sbjct: 289 SAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACS 348
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV KG + F+SM+ Y +KP +HYTC +D+LSRSG LSEAE I +MP+EPD W
Sbjct: 349 HAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATW 408
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LLS CK + + Q+ R NL +L + P+ Y+LLSN+YA +W VRK+M E
Sbjct: 409 GALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKVRKIMAEM 468
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
+RK G SWVE + F
Sbjct: 469 EIRKVPGYSWVEAGRESRIF 488
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 201/443 (45%), Gaps = 39/443 (8%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKP 182
L+S + + + ++ F+ P +++ ++A + + L L ++L + ++P
Sbjct: 42 LVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSDDALRP 101
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +S+ A + RLG + + + V +SLI + K G AR VF
Sbjct: 102 DHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVF 161
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D + ++ V WT ++ + G GEA +F MP +W+ +I+ + ++G A
Sbjct: 162 DSIGVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMG 221
Query: 303 LFRQMTRYSFKPNTS-CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF +M R + + + + V+ A L AL G +H V+++G + + NAL+D+Y
Sbjct: 222 LFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMY 281
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKC + R VF+ I +D V+SW +++ G +G+ EE
Sbjct: 282 SKCSDIHSAREVFEGITVRD---VISWTTILVGEAQHGRAEE------------------ 320
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-L 480
VFA++N MLL+G PN+ TF ++ A + ++KG+ L + +
Sbjct: 321 -------------VFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREY 367
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINL 539
G V T D ++SG + + ++ MP + +E +W ++ + + + +
Sbjct: 368 GMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRV 427
Query: 540 FEE-MEKTSITPNELTILSVLFA 561
+ +E P+ +LS ++A
Sbjct: 428 ADNLLELRPKDPSTYILLSNVYA 450
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 152/302 (50%), Gaps = 13/302 (4%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D VV + +I+ + G ++A+++FD + +N V WTALISG+ +G E++ F+ P
Sbjct: 137 DNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVVWTALISGYASNGCTGEALDLFQSMP 196
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV-TFSSICKACAEINDFRLGL 204
+ +WTA I GFV+ G A+ LF+++ ++ ++ +++ A++ LG
Sbjct: 197 AHGLFTWTALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGR 256
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ G + + GF + V N+L+ + K ++ AR VF+ + RDV+SWT IL + G
Sbjct: 257 QLHGFVMRLGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVRDVISWTTILVGEAQHG 316
Query: 265 DLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
E +++ M + NEV++ +I + +G ++ +LF M R Y KP +
Sbjct: 317 RAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHY 376
Query: 320 SIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ L L+ RSG A L + E D AL+ K +T+ V D++
Sbjct: 377 TCYLDLLS-----RSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNL 431
Query: 378 VE 379
+E
Sbjct: 432 LE 433
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 278/487 (57%), Gaps = 8/487 (1%)
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
LK+G A + ++ +V + ++ + GD+ + +F+ + E + + ++ MI
Sbjct: 86 LKLGHQVHAHMLLRGLQPTALVG-SKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIR 144
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y + G+ E + M + F + F VL + L ++ G VH +L+IG++
Sbjct: 145 AYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQF 204
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D++++ +LI LY KCGE D VFD++ +DV+ SWN+++ GY +G ++ A +F+
Sbjct: 205 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVS---SWNALLAGYTKSGCIDAALAIFE 261
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL--SGEIPNKSTFSSVLCASASVASL 467
MP RN VSW+ +ISGY + ++F+EM+ SG PN T SVL A A +++L
Sbjct: 262 RMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTL 321
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKNEISWTVMVR 525
E+G+ +H ++G + + ALT YAK G + +R FD++ +KN I+W M+
Sbjct: 322 ERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMIT 381
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
A G+ ++++ F EM + I P+++T +L CSHSGLVD GLKYFN M Y+I
Sbjct: 382 AYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSIN 441
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
P HY CV D+L R+GRL+EA + MP + W SLL+ C+ ++N ++AE A +
Sbjct: 442 PRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARK 501
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
L+ L E+ YVLLSN+YA AGRW + +R ++ +G +KS GCSW+E+ + H F
Sbjct: 502 LFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLG 561
Query: 706 KTDHNPK 712
+P+
Sbjct: 562 GDTSHPQ 568
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 210/449 (46%), Gaps = 17/449 (3%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
++ G+ A L G+ + + + +++ + G ++ S+ F + + + + I
Sbjct: 86 LKLGHQVHAHMLLRGL-QPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIR 144
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+ + GF+ + + + G + TF + K+ E+ +G V GLI + G +
Sbjct: 145 AYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQF 204
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+ V SLI L K GE++ A VFD M RDV SW +L + + G + A IF+ MP
Sbjct: 205 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 264
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFSIVLSALASLKALRSG 335
RN VSW+ MI+ Y+QSG ++A LF +M + +PN VL A A L L G
Sbjct: 265 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 324
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H ++G+ + + AL +Y+KCG D R FD + ++ ++++WN+MI Y
Sbjct: 325 RQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKL-NRNEKNLIAWNTMITAY 383
Query: 396 GLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PN 450
G +A F M + +D++++ ++SG D+ FN M + I P
Sbjct: 384 ASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPR 443
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE----SSR 506
++ V L + L G ++ P + +L K ++E ++R
Sbjct: 444 VEHYACVADLLGRAGRLAEASKLVG---EMPMPAGPSIWGSLLAACRKHRNLEMAETAAR 500
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKE 535
++F P+ N ++ ++ AE+G +E
Sbjct: 501 KLFVLEPE-NTGNYVLLSNMYAEAGRWQE 528
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 152/300 (50%), Gaps = 40/300 (13%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V G+ +HG +++ G+ + Y+ T L+I+Y C
Sbjct: 187 VWMGKCVHGLILRIGLQFDLYVATSLIILY-----------------------GKC---- 219
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
G + +A ++FD M R+ SW AL++G+ K G ++ ++ FER P++N++SWT I
Sbjct: 220 ----GEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMI 275
Query: 157 CGFVQNGFSFEALKLFLKLL--ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
G+ Q+G + +AL LF +++ +SGV+PN VT S+ ACA+++ G + L + G
Sbjct: 276 SGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMG 335
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK--RDVVSWTVILDVFIEMGDLGEARRI 272
+ SV +L + K G + AR+ FD++ + +++++W ++ + G +A
Sbjct: 336 LNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVST 395
Query: 273 FDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALA 327
F EM + ++++++ +++ + SG + + F M T YS P ++ V L
Sbjct: 396 FREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLG 455
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 69/354 (19%)
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P ++ V L L L+ G VHAH+L G++ + + ++ Y+ G+ V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F+ I E + +NSMI Y G E + +M SW
Sbjct: 128 FNGIGEPS---SLLFNSMIRAYARYGFAERTVATYFSMH-----SW-------------- 165
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
G + TF VL +S + S+ GK +HG I+++G +D+++ T+L
Sbjct: 166 ------------GFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLI 213
Query: 494 DTYAKSGDIESSRRVFD-------------------------------RMPDKNEISWTV 522
Y K G+I + +VFD RMP +N +SWT
Sbjct: 214 ILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTT 273
Query: 523 MVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ G ++SG A+++++LF+EM E + + PN +TI+SVL AC+ +++G + + +
Sbjct: 274 MISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG-RQIHELAC 332
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF-EPDSNAWASLLSGCKTY 633
+ N + M ++ G L +A + + + E + AW ++++ +Y
Sbjct: 333 RMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASY 386
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 259/449 (57%), Gaps = 3/449 (0%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G L AR +FD + N W+ MI Y+ S PEEA L+ M +S N F +L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A +S+ AL +HAH++K+G +++ +N+L+++YSK G+ K RL+FD + ++D
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT- 184
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSWNSMI GY G++E A E+F++MP+RN +SW+++ISG + + +F+ M
Sbjct: 185 --VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQ 242
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+G + S L A A + L++GK +H I K D LG L D YAK GD+E
Sbjct: 243 TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLE 302
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ VF +M +K WT M+ G A G +E++ F +M+ + PN++T +L ACS
Sbjct: 303 EAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACS 362
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV + F SME I+ KP+ HY C+VD+L R+G L EAE+ I +MP +P++ W
Sbjct: 363 HAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIW 422
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL+ C + N ++ ++ K L ++ H Y+ L++I+A+AG W A VR+ M E+
Sbjct: 423 GALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G+ K GCS + V H F + +P+
Sbjct: 483 GVSKLPGCSVISVNGTAHEFLAGDESHPQ 511
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 199/427 (46%), Gaps = 42/427 (9%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALI-SGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + + + D +P +++ A SG + + R F+R N W I G+
Sbjct: 39 GQMLKTGLILDEIPASKLLAFCASPNSGSLAYART-----VFDRIFRPNTFMWNTMIRGY 93
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ EAL L+ +L V N TF + KAC+ ++ + I K GF +
Sbjct: 94 SNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEI 153
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
NSL+ + K G++ AR +FD++++RD VSW ++D + + G++ A IF+ MPER
Sbjct: 154 YTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPER 213
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N +SW+ MI+ +G P+EA LF +M K + L A A L L G +H
Sbjct: 214 NIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIH 273
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
A++ K IE D + LID+Y+KCG+ ++ VF + EK V+ W +MI GY ++G
Sbjct: 274 AYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS---VWTAMISGYAIHG 330
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+ EA E W F +M +G PN+ TF+ +L
Sbjct: 331 RGREALE------------W-------------------FMKMQTAGVEPNQMTFTGILT 359
Query: 460 ASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NE 517
A + + + K L + ++ GF + + D ++G ++ + + + MP K N
Sbjct: 360 ACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNA 419
Query: 518 ISWTVMV 524
W ++
Sbjct: 420 AIWGALL 426
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 147/297 (49%), Gaps = 42/297 (14%)
Query: 365 GETKDGRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G+ L+ D I K +A S NS G + A+ +FD + + N W+ +I
Sbjct: 39 GQMLKTGLILDEIPASKLLAFCASPNS--------GSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
GY K+ + +++ ML N TF +L A +S+++LE+ + +H IIK+GF
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFG 150
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDR-------------------------------M 512
+++ +L + Y+KSGDI+S+R +FD+ M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
P++N ISWT M+ G +G KE++NLF M+ I + + ++S L AC+ G++D+G
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG- 269
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
K+ ++ + I+ + ++DM ++ G L EA + M E + W +++SG
Sbjct: 270 KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISG 325
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 179/393 (45%), Gaps = 39/393 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +S + + + + +H H+IK G E Y T LL +Y S
Sbjct: 124 LLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKS----------------- 166
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G+++ A+ LFD + +R+ VSW ++I G+ K G +E + F P
Sbjct: 167 --------------GDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPE 212
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N+ISWT+ I G V G EAL LF ++ +G+K + V S +ACA++ G +
Sbjct: 213 RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 272
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I K E + LI + K G+++ A VF +ME++ V WT ++ + G
Sbjct: 273 HAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRG 332
Query: 267 GEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSI 321
EA F +M E N+++++ ++ + +G EA LF M R + FKP+ +
Sbjct: 333 REALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC 392
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
++ L L+ + + + ++ + I AL++ G + G+ + +++ D
Sbjct: 393 MVDLLGRAGLLKEAEEL---IENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVD 449
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
H + + + G+ +A + M ++
Sbjct: 450 PGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 313/581 (53%), Gaps = 8/581 (1%)
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
++ F+R P + TA LF ++ +GV+P+ TF + K C+
Sbjct: 56 ALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFK-CSS 114
Query: 197 INDFRLGLSVFGLIFKAGFEKHVS-----VCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
+ L + ++ A + V NSLI + +++G AR FD + +D V
Sbjct: 115 SSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAV 174
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
+WT+++ +MG L + + + + P R+ +SW+ +IA Y+++ EA F+ M +
Sbjct: 175 AWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHG 234
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
P+ VLSA A LK L G +H V + G+ + ALID+Y+KCG+ +
Sbjct: 235 IAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQ 294
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD++ SWN++I GY +G ++ A+ LFD M R+ ++++++++GY+ Q
Sbjct: 295 QVFDALGRGPRPQ--SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQ 352
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+F M + T ++L A AS+ +L++G+ LH I + D++LGTA
Sbjct: 353 LREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTA 412
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D Y K G ++ + VF RM ++ +WT M+ GLA +G K ++ F +M PN
Sbjct: 413 LLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPN 472
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
++ ++VL ACSHS L+++G YF+ M +YNI P HY C++D+L RSG L EA D +
Sbjct: 473 SVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLV 532
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
+MP +P++ WAS+LS C+ +K+ +A+ A ++L KL + YV L NIY + +W
Sbjct: 533 KTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWE 592
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+A +R LM E+ ++K+ G S + V QVH F +P+
Sbjct: 593 NASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPR 633
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 239/515 (46%), Gaps = 79/515 (15%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N +I+ I+ G +A+R FD + ++ V+WT LISG K G + ++ + P ++
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRD 203
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
VISWT+ I + + + EA+ F +L G+ P+EVT ++ ACA++ D LG S+
Sbjct: 204 VISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHL 263
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLG 267
L+ + G ++ +LI + K G+ A+ VFD + + SW I+D + + G +
Sbjct: 264 LVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVD 323
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
AR +FDEM R+ ++++ M+ Y SG EA LF M R+ + + +L+A A
Sbjct: 324 VARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACA 383
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
SL AL+ G +HA + + +E D+++ AL+D+Y KCG + +VF + ++DV +
Sbjct: 384 SLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVH---T 440
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
W +MI G NG + A LEH F +M G
Sbjct: 441 WTAMIAGLAFNGMGKAA----------------------LEH---------FYQMRCDGF 469
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN ++ +VL A + L +G +L F + R
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEG--------RLYF--------------------DEMRI 501
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC---SH 564
+++ P + M+ L SG E+++L + M I PN + S+L AC H
Sbjct: 502 LYNIHPQIEH--YGCMIDLLGRSGLLDEAMDLVKTM---PIQPNAVIWASILSACRVHKH 556
Query: 565 SGLVDKGLKYFNSMEP--------IYNIKPNGRHY 591
L ++ +EP +YNI + R +
Sbjct: 557 IDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQW 591
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 20/243 (8%)
Query: 33 SQNLVIQGRALHGHL-IKTGIHKE---RYLTT--RLLIMYLGSRKSLEANEIVKDLNGFD 86
S N +I G HGH+ + + E R + T ++ Y+ S + EA + + D
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD 367
Query: 87 LVVHNC----MINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESM 138
L V N ++ A G L++ + L + +R + TAL+ +MK GRV+E+
Sbjct: 368 LRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE-- 196
F+R ++V +WTA I G NG AL+ F ++ G +PN V++ ++ AC+
Sbjct: 428 IVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSC 487
Query: 197 -INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWT 254
+N+ RL +++ + +I L + G +D A + M + + V W
Sbjct: 488 LLNEGRLYFDEMRILY--NIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWA 545
Query: 255 VIL 257
IL
Sbjct: 546 SIL 548
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL S + QGRALH + + + + YL T LL MY+ + EA + + +
Sbjct: 374 TVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
Query: 83 NGFDLVVHNCMINANIQWGNLEEA------QRLFDGMPERNEVSWTALISGFMKHGRVEE 136
D+ MI A + + + +A Q DG + N VS+ A+++ + E
Sbjct: 434 GKRDVHTWTAMI-AGLAFNGMGKAALEHFYQMRCDGF-QPNSVSYIAVLTACSHSCLLNE 491
Query: 137 SMWYFER-----NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
YF+ N + + I ++G EA+ L + ++PN V ++SI
Sbjct: 492 GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM---PIQPNAVIWASIL 548
Query: 192 KAC 194
AC
Sbjct: 549 SAC 551
>gi|334185448|ref|NP_001078182.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273297|sp|Q9LHN5.1|PP242_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g18840
gi|9294693|dbj|BAB03093.1| unnamed protein product [Arabidopsis thaliana]
gi|332642633|gb|AEE76154.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 344/638 (53%), Gaps = 19/638 (2%)
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
+K + V N ++N + G L EA+ +FD M ERN SW A+I+ ++K V+E+
Sbjct: 15 IKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEAR 74
Query: 139 WYFER-NPFQNVISWTAAICGFVQ-NGFSFEALKLFLKLL---ESGVKPNEVTFSSICKA 193
FE N +++I++ + GF + +G EA+++F ++ + + ++ T +++ K
Sbjct: 75 ELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKL 134
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR--MEKRDVV 251
A++ + G + G++ K G + +SLI + K G+ ++F+ +E D V
Sbjct: 135 SAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSV 194
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+ ++ + GD+ +A +F PE N+ +SW+ +IA Y Q+GY EEA ++ M
Sbjct: 195 ARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEEN 254
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK-- 368
K + F VL+ L+SLK+L+ G VHA VLK G + F+S+ ++D+Y KCG K
Sbjct: 255 GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYA 314
Query: 369 -DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
L++ ++ S +SMI GY G+M EAK LFD++ ++N V W+A+ GYL
Sbjct: 315 ESAHLLYG------FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 428 EHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+Q D V + + + P+ SVL A + A +E GK++HG ++ G D
Sbjct: 369 NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDK 428
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
L TA D Y+K G++E + R+FD +++ + + M+ G A G+ +S FE+M +
Sbjct: 429 KLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
P+E+T +++L AC H GLV +G KYF SM YNI P HYTC++D+ ++ RL +
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 607 AEDFINSM-PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
A + + + E D+ + L+ C KN ++ + + L + + + Y+ ++N YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYA 608
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
S+GRW + +R M K L GCSW + Q H F
Sbjct: 609 SSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMF 646
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 184/400 (46%), Gaps = 48/400 (12%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG-----FDLVVHN 91
V G LHG L+KTG ++ + L+ MY K + E+ NG D V N
Sbjct: 141 VFYGEQLHGVLVKTGNDGTKFAVSSLIHMY---SKCGKFKEVCNIFNGSCVEFVDSVARN 197
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNE-VSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
MI A + G++++A +F PE N+ +SW LI+G
Sbjct: 198 AMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAG----------------------- 234
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+ QNG+ EALK+ + + E+G+K +E +F ++ + + ++G V +
Sbjct: 235 --------YAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K G + V + ++ + K G + A S ++ S + ++ + G + EA+
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ-MTRYSFKPNTSCFSIVLSALASL 329
R+FD + E+N V W+ M Y P+ L R + + P++ VL A +
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ G +H H L+ GI D + A +D+YSKCG + +FDS E+D V +N
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERD---TVMYN 463
Query: 390 SMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISG 425
+MI G +G ++ + F++M K +++++ A++S
Sbjct: 464 AMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 135/270 (50%), Gaps = 42/270 (15%)
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+K L+ G H +K G SN L++LYSK G ++ R VFD ++E++ V SW
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERN---VYSW 57
Query: 389 NSMIGGYGLNGQMEEAKELFD-NMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLSG 446
N++I Y ++EA+ELF+ + +R+ ++++ ++SG+ + + +F EM
Sbjct: 58 NAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 447 EIP---NKSTFSSVLCASASVASLEKGKDLHGKIIKLG-----FPY-------------- 484
+ + T ++++ SA + ++ G+ LHG ++K G F
Sbjct: 118 KDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFK 177
Query: 485 ---DVFLGT-----------ALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAE 529
++F G+ A+ Y + GDI+ + VF R P+ N+ ISW ++ G A+
Sbjct: 178 EVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQ 237
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVL 559
+GY +E++ + ME+ + +E + +VL
Sbjct: 238 NGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 62/155 (40%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HGH ++TGI ++ L T + MY +
Sbjct: 412 GKEIHGHSLRTGILMDKKLVTAFVDMY-------------------------------SK 440
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+E A+R+FD ER+ V + A+I+G HG +S +FE
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE----------------- 483
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ E G KP+E+TF ++ AC
Sbjct: 484 --------------DMTEGGFKPDEITFMALLSAC 504
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 268/469 (57%), Gaps = 30/469 (6%)
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKA 331
F +M N ++ MI + GYP A + + M S P + FS ++ A + A
Sbjct: 94 FTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCA 153
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV--------- 382
+ G VH H+ K G E +F+ AL+D YSK + R VFD + E+D
Sbjct: 154 VELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSA 213
Query: 383 -------------------AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
+ +WN+MI GY G +E A+ LF+ MP ++ +SW+ +I
Sbjct: 214 LARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMI 273
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+ Y ++KQ+ A+++EM L+G IP++ T S+V A A + +LE GK++H ++ G
Sbjct: 274 TCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLN 333
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
DV++G+AL D YAK G ++ S +F ++ DKN W ++ GLA GYA++++ +F M
Sbjct: 334 LDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIM 393
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
E+ I PN +T +S+L AC+H+GLVD+G F SM Y+I+P+ RHY C+VDMLS+SG
Sbjct: 394 EREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGY 453
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L+EA + I SM FEP+S W +LL+GCK + N +IAE AV+ L L + Y LL ++
Sbjct: 454 LNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSM 513
Query: 664 YASAGRWIDAMNVRKLMTEKGL-RKSGGCSWVEVRNQVHFFFQKTDHNP 711
YA W++ ++R +M EKG+ +K G SW+E+ +H F D +P
Sbjct: 514 YAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHP 562
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 232/538 (43%), Gaps = 111/538 (20%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY----FERNPFQNVISWTAAIC 157
+ E L M + N + L+ F+ S+ Y F + NV + A I
Sbjct: 51 TINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIK 110
Query: 158 GFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
GFV G+ F AL+ ++ +LE S V P TFSS+ KAC + LG V I+K GFE
Sbjct: 111 GFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFE 170
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
H+ V +L+ K+ + AR VFD M +RD +WT +L +GD+ AR++F+EM
Sbjct: 171 SHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEM 230
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQM------------TRYS------------- 311
PERN +W+ MI Y + G E A LF QM T YS
Sbjct: 231 PERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYS 290
Query: 312 ------FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
P+ S V SA A + AL G +H +V+ G+ DV+I +AL+D+Y+KCG
Sbjct: 291 EMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCG 350
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
L+F + +K+ + WN++I G ++G E+A +F M +R +
Sbjct: 351 SLDLSLLIFFKLTDKN---LYCWNAVIEGLAVHGYAEKALRMFAIM-EREKI-------- 398
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
+PN TF S+L A +++G+
Sbjct: 399 ----------------------MPNGVTFISILSACTHAGLVDEGRSR------------ 424
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
FL S R +D PD + MV L++SGY E++ L + ME
Sbjct: 425 -FL---------------SMTRDYDIRPDIRH--YGCMVDMLSKSGYLNEALELIKSME- 465
Query: 546 TSITPNELTILSVLFACSHSG---LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
PN + ++L C G + + ++ +EP+ N HY +V M +
Sbjct: 466 --FEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPM-----NSGHYNLLVSMYAE 516
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 203/460 (44%), Gaps = 38/460 (8%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L+K T V G+ +H H+ K G ++ T L+ Y EA ++ ++ D
Sbjct: 144 LVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERD 203
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
M++A + G+++ A++LF+ MPERN +W +I G+ + G VE + F + P
Sbjct: 204 AFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPT 263
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+++ISWT I + QN +AL ++ ++ +G+ P+EVT S++ ACA I LG +
Sbjct: 264 KDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEI 323
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ G V + ++L+ + K G +DL+ +F ++ +++ W +++
Sbjct: 324 HHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIE-------- 375
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
G A GY E+A R+F M R PN F +LSA
Sbjct: 376 GLAVH-----------------------GYAEKALRMFAIMEREKIMPNGVTFISILSAC 412
Query: 327 ASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ G + + I D+ ++D+ SK G + + S+ E + +
Sbjct: 413 THAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSM-EFEPNSI 471
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDN---MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+ W +++ G L+G E A++ + + N ++ ++S Y E K + + A M
Sbjct: 472 I-WGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDW-MEVAHIRSM 529
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+ + K SS + ++ D H K+ F
Sbjct: 530 MKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYF 569
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/649 (29%), Positives = 323/649 (49%), Gaps = 77/649 (11%)
Query: 74 EANEIVKDLNGFDLVV----HNCMINANIQWGNLEEAQRLFDGMPERNEVS------WTA 123
EA++ +K+++ D+ V + C+ A + +L + + + D + R V
Sbjct: 70 EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRL--RRTVKNPSGSIENC 127
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + G + F+ +N++SW I + +NG +A++LF + SG++PN
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ S+ ++C + LG + + +A +++V
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITV---------------------- 225
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
T I ++++ G L A+ +FD M +N V+W+ ++ Y Q+ E A L
Sbjct: 226 ---------ETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALEL 276
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M + + FSIVL L+ G +H+H++K+G E +V + L+D Y K
Sbjct: 277 FARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVK 336
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ +E A F + + NDVSWSA+I
Sbjct: 337 CGD----------------------------------IESAYRSFGRISEPNDVSWSALI 362
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
SG+ + + + +F + G + N ++SV A A+ A+L G HG IK G
Sbjct: 363 SGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
++ +A+ Y+K G ++ +RR F+ + + + ++WT ++ G A G A E++ F M
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRM 482
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + PN +T ++VL ACSHSGLV + +Y SM Y +KP HY C++D SR+G
Sbjct: 483 QSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGL 542
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L EA + IN MPFEPD+ +W SLL GC + + ++ + A +NL++L AGY+LL N+
Sbjct: 543 LQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNL 602
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y++ G+W +A +VRKLM E+ L+K CSW+ V+ QVH F H+P+
Sbjct: 603 YSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQ 651
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/542 (22%), Positives = 216/542 (39%), Gaps = 106/542 (19%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
CL + + GR +H L +T + + LL MY ++ ++ ++
Sbjct: 92 CLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMK 151
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPER----------------------------- 116
+LV +I+A + G LE+A RLF M
Sbjct: 152 NLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIH 211
Query: 117 ----------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
N TA+ + +++ G +E + F+ QN ++WT + G+ Q
Sbjct: 212 SHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLE 271
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
AL+LF ++ GV+ +E FS + K C + D+ +G + I K G E VSV L+
Sbjct: 272 VALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLV 331
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+K G+++ A F R+ + + VSW+
Sbjct: 332 DFYVKCGDIESAYRSFGRISEPNDVSWS-------------------------------A 360
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
+I+ ++QSG E+ ++F + N+ ++ V A A+ L G H +K G
Sbjct: 361 LISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRG 420
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ ++ +A++ +YSKCG R F+SI E D V+W ++I GY +G EA
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD---AVAWTAIISGYAYHGNAAEA-- 475
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
F M G PN TF +VL A +
Sbjct: 476 -----------------------------LGFFRRMQSYGVRPNAVTFIAVLTACSHSGL 506
Query: 467 LEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ + K G + + G + + DTY+++G ++ + + +RMP + + +SW ++
Sbjct: 507 VAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566
Query: 525 RG 526
G
Sbjct: 567 GG 568
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 158/376 (42%), Gaps = 44/376 (11%)
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
++ G +EA ++M + + A L++L G +H + +
Sbjct: 63 SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSG 122
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
I N L+ +Y CG D + VFD ++ K+ +VSW +I Y NG++E+A LF +M
Sbjct: 123 SIENCLLRMYCDCGSCIDVQKVFDEMLMKN---LVSWVIVISAYAKNGELEKAIRLFSDM 179
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
SG PN + + S+L + + LE GK
Sbjct: 180 QA-------------------------------SGIRPNSAVYMSLLQSCLGPSFLELGK 208
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H +I+ ++ + TA+ + Y + G +E ++ VFD M +N ++WT ++ G ++
Sbjct: 209 QIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL-KYFNSMEPIYNIKPNGRH 590
+ ++ LF M + +E VL C GL D + + +S +
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVC--CGLEDWDMGRQIHSHIVKLGAESEVSV 326
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
T +VD + G + A + EP+ +W++L+SG + E +K L
Sbjct: 327 GTPLVDFYVKCGDIESAYRSFGRIS-EPNDVSWSALISG---FSQSGRLEDCIKIFTSLR 382
Query: 651 EEHPAGYVLLSNIYAS 666
E G VL S IY S
Sbjct: 383 SE---GVVLNSFIYTS 395
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 152/342 (44%), Gaps = 22/342 (6%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T L+ ++K G +E + F R N +SW+A I GF Q+G + +K+F L GV
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N ++S+ +ACA + +G G K G ++ ++++T+ K G +D AR
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYP 297
F+ +++ D V+WT I+ + G+ EA F M N V++ ++ + SG
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507
Query: 298 EEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EA + M+R Y KP + ++ + L+ + + + ++ E D +
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALEL---INRMPFEPDAMSWKS 564
Query: 357 LI-DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
L+ ++ C + K G++ +++ D + + Y G+ EEA + M +R
Sbjct: 565 LLGGCWAHC-DLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERE 623
Query: 416 -----DVSWSAI-------ISGYLEHKQFDLVFAVFNEMLLS 445
SW ++ + G H Q + +++ E S
Sbjct: 624 LKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCS 665
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 205/613 (33%), Positives = 312/613 (50%), Gaps = 82/613 (13%)
Query: 110 FDGMPERNEVSWTALISGFMKHGRVEES---MWYFERNPFQNVISWTAAICGFVQNGFSF 166
FDG +++ +++ G + GR + S W+++ NV SW + I + G S
Sbjct: 1945 FDG------ITYNSILFG-VPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSV 1997
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EAL+ F L + G+ P +F K+C+ + D G F GFE + V ++LI
Sbjct: 1998 EALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALI 2057
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
D++ + G L +AR +FDE+P RN VSW+
Sbjct: 2058 -------------------------------DMYSKCGQLKDARALFDEIPLRNVVSWTS 2086
Query: 287 MIARYNQSGYPEEAFRLFRQM----TRYSFKPNTSCFSIVLSALASLKALRSGMH----V 338
MI Y Q+ + A LF+ T N S+V+ ++ S + SG V
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGV 2146
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H V+K G + + + N L+D Y+KCG+ + VFD + EKD +SWNSMI Y +
Sbjct: 2147 HGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDD---ISWNSMIAVYAQS 2203
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G EA E+F M + V ++A+ T S+VL
Sbjct: 2204 GLSGEALEVFHGMVRHVGVRYNAV------------------------------TLSAVL 2233
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A +L GK +H ++IK+ Y+V +GT++ D Y K G +E +++ FDRM +KN
Sbjct: 2234 LACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 2293
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SWT MV G G AKE++++F +M + + PN +T +SVL ACSH+GLV++G +FN+M
Sbjct: 2294 SWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAM 2353
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ Y+I+P HY C+VD+ R+G L+EA + I M +PD W SLL C+ +KN +
Sbjct: 2354 KHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDL 2413
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E A + L++L ++ YVLLSN+YA AGRW D +R LM + L K G S VE++
Sbjct: 2414 GEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKG 2473
Query: 699 QVHFFFQKTDHNP 711
+VH F +P
Sbjct: 2474 RVHVFLVGDKEHP 2486
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 188/352 (53%), Gaps = 3/352 (0%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ ++ G + A +F ++ +W+++I +G E+A L++ M +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
F V+ A + ++ G VH ++K G DVF+ N LID Y KCG T+ VF+
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ V +VVSW ++I G G ++EA+ +FD +P +N VSW+A+I+GY+ ++Q +
Sbjct: 185 KM---RVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F M PN+ T S++ A + L G+ +H IK V+LGTAL D
Sbjct: 242 LELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDM 301
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y+K G I+ + VF+ MP K+ +W M+ L G +E++NLF EME+ ++ P+ +T
Sbjct: 302 YSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITF 361
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ VL AC H V +G YF M Y I P HY C+ ++ +RS L EA
Sbjct: 362 IGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 155/292 (53%), Gaps = 3/292 (1%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + HGR+ ++ F + +W I NG S +AL L+ ++ G+ +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ TF + KAC LG V G + K GF V V N+LI K G A VF+
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+M R+VVSWT ++ I GDL EARRIFDE+P +N VSW+ MI Y ++ PEEA L
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F++M + PN ++ A + L G +H + +K IE V++ ALID+YSK
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSK 304
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
CG KD VF+++ K + +WNSMI G++G +EA LF M + N
Sbjct: 305 CGSIKDAIEVFETMPRKSLP---TWNSMITSLGVHGLGQEALNLFSEMERVN 353
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 203/458 (44%), Gaps = 83/458 (18%)
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
SL ++ + F + +C ++ G + Q G VS +ALI + K
Sbjct: 2005 SLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVS-SALIDMYSKC 2063
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--------SGVKPN 183
G+++++ F+ P +NV+SWT+ I G+VQN + AL LF LE + V +
Sbjct: 2064 GQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 2123
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
V S+ AC+ ++ + V G + K GF+ + V N+L+ K G+ +++ VFD
Sbjct: 2124 SVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD 2183
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
ME++D +SW ++ V+ + G GEA +F M V +
Sbjct: 2184 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY------------------- 2224
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
N S VL A A ALR+G +H V+K+ +E +V + ++ID+Y K
Sbjct: 2225 -----------NAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 2273
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG + + FD + EK+V SW +M+ GYG++G+ AKE D
Sbjct: 2274 CGRVEMAKKTFDRMKEKNVK---SWTAMVAGYGMHGR---AKEALD-------------- 2313
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+F +M+ +G PN TF SVL A + +E+G +
Sbjct: 2314 --------------IFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFN---AMKHK 2356
Query: 484 YDVFLGT----ALTDTYAKSGDIESSRRVFDRM---PD 514
YD+ G + D + ++G + + + RM PD
Sbjct: 2357 YDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPD 2394
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 41/316 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYL-------TTRLLIMYLGSRKSLEANEIV 79
+++ T L Q L+ +++ GI +++ T L + LG K + + I
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG--KVVHGSLIK 153
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+G D+ V N +I+ + G+ A ++F+ M RN VSWT +ISG + G ++E+
Sbjct: 154 YGFSG-DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ P +NV+SWTA I G+++N EAL+LF ++ + PNE T S+ KAC E+
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG + H + I + + +G T ++D+
Sbjct: 273 LTLGRGI-----------HDYAIKNCIEIGVYLG--------------------TALIDM 301
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + G + +A +F+ MP ++ +W+ MI G +EA LF +M R + KP+ F
Sbjct: 302 YSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITF 361
Query: 320 SIVLSALASLKALRSG 335
VL A +K ++ G
Sbjct: 362 IGVLCACVHIKNVKEG 377
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 69/335 (20%)
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L + K + +HA +++ G+ D ++ LI LYS G L+F I
Sbjct: 34 LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN---PCT 90
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+WN +I +NG E+A L+ NM +
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNM-------------------------------VCQ 119
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG----- 500
G +K TF V+ A + S++ GK +HG +IK GF DVF+ L D Y K G
Sbjct: 120 GIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFA 179
Query: 501 --------------------------DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
D++ +RR+FD +P KN +SWT M+ G + +
Sbjct: 180 LKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 239
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-TC 593
E++ LF+ M+ +I PNE T++S++ AC+ G++ G + I N G + T
Sbjct: 240 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY--AIKNCIEIGVYLGTA 297
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++DM S+ G + +A + +MP W S+++
Sbjct: 298 LIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMIT 331
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 183/463 (39%), Gaps = 93/463 (20%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL 62
+SLR L I +SF I++C L ++ GR H G + ++++ L
Sbjct: 2004 SSLRKLGLIPTRSSFPCTIKSCSALCD-------LVSGRMSHQQAFVFGFETDLFVSSAL 2056
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF-DGMPERNEVS- 120
+ MY + +A + ++ ++V MI +Q + A LF D + E EV
Sbjct: 2057 IDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVED 2116
Query: 121 ---------------------------------------------WTALISGFMKHGRVE 135
L+ + K G+
Sbjct: 2117 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 2176
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKAC 194
S F+ ++ ISW + I + Q+G S EAL++F ++ GV+ N VT S++ AC
Sbjct: 2177 VSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLAC 2236
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A R G + + K E +V V S+I + K G V++A+ FDRM++++V SWT
Sbjct: 2237 AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWT 2296
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
M+A Y G +EA +F +M R KP
Sbjct: 2297 -------------------------------AMVAGYGMHGRAKEALDIFYKMVRAGVKP 2325
Query: 315 NTSCFSIVLSALASLKALRSGMH-VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
N F VL+A + + G H +A K IE + ++DL+ + G + +
Sbjct: 2326 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 2385
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMP 412
+ K V W S++G ++ ++ A++LF+ P
Sbjct: 2386 IKRMKMK--PDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDP 2426
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI + K G +++++ FE P +++ +W + I +G EAL LF ++ VK
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVK 355
Query: 182 PNEVTFSSICKACAEINDFRLGLSVF 207
P+ +TF + AC I + + G + F
Sbjct: 356 PDAITFIGVLCACVHIKNVKEGCAYF 381
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/467 (36%), Positives = 259/467 (55%), Gaps = 35/467 (7%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARR+FDE+P + + W+ +I Y +G + A L+ M +PN + VL A +
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L A+ G+ +H+H G+E DVF+ AL+D Y+KCG + + +F S+ +DV V+W
Sbjct: 122 LLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDV---VAW 178
Query: 389 NSMIGGYGLNG----------QMEE----------------------AKELFDNMPKRND 416
N+MI G L G QM+E A+++FD M RN+
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNE 238
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
VSWSA+I GY+ +F M LSG P+ +T VL A + +A+L+ G HG
Sbjct: 239 VSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGY 298
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+I GF D + AL D Y+K G I +R VF+RM + +SW M+ G G E+
Sbjct: 299 LIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEA 358
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ LF ++ + P+++T + +L +CSHSGLV +G +F++M ++I P H C+VD
Sbjct: 359 LGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVD 418
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+L R+G + EA FI +MPFEPD W++LLS C+ +KN ++ E K + L E
Sbjct: 419 ILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGN 478
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+VLLSNIY++AGRW DA ++R + GL+K GCSW+E+ VH F
Sbjct: 479 FVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAF 525
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 178/372 (47%), Gaps = 43/372 (11%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISG----FMKHGRVEESMWYFERNPFQN 148
++ A IQ +L EA+++ + + ++++ ++ +V + F+ P +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
VI W I + NG A+ L+ +L GV+PN+ T+ + KAC+ + G+ +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL----------- 257
G E V VC +L+ K G + A+ +F M RDVV+W ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 258 --DVFIEMGDLG-------------------EARRIFDEMPERNEVSWSVMIARYNQSGY 296
+ ++M + G AR+IFD M RNEVSWS MI Y S
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDC 253
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+EA +FR M P+ + VL A + L AL+ G H +++ G D I NA
Sbjct: 254 MKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNA 313
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----P 412
LID+YSKCG+ R VF+ + D +VSWN+MI GYG++G EA LF ++
Sbjct: 314 LIDMYSKCGKISFAREVFNRMDRHD---IVSWNAMIIGYGIHGLGMEALGLFHDLLALGL 370
Query: 413 KRNDVSWSAIIS 424
K +D+++ ++S
Sbjct: 371 KPDDITFICLLS 382
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 166/419 (39%), Gaps = 84/419 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + + G +H H G+ + ++ T L+ Y +EA + ++ D
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY----FE 142
+V N MI +G ++A +L M E ++ I G + + + Y F+
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP---TCQCLLYARKIFD 231
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+N +SW+A I G+V + EAL +F + SG+ P+ T + AC+ + +
Sbjct: 232 VMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQH 291
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G G + GF +CN+LI + K G++ AR VF+RM++ D+
Sbjct: 292 GFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDI------------ 339
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
VSW+ MI Y G EA LF + KP+ F +
Sbjct: 340 -------------------VSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 380
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD------S 376
LS+ S G +GRL FD S
Sbjct: 381 LSSC-----------------------------------SHSGLVMEGRLWFDAMSRDFS 405
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDL 434
IV + + H + ++G GL ++EA NMP DV WSA++S HK +L
Sbjct: 406 IVPR-MEHCICMVDILGRAGL---IDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIEL 460
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 11/234 (4%)
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
Q+ A+ LFD +P + + W+ II Y + FD +++ ML G PNK T+ VL
Sbjct: 58 QVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLK 117
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A + + ++E G ++H G DVF+ TAL D YAK G + ++R+F M ++ ++
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W M+ G + G +++ L +M++ I PN TI+ VL C + L Y +
Sbjct: 178 WNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC-------QCLLYARKIF 230
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF---EPDSNAWASLLSGC 630
+ ++ N ++ ++ S + EA D M +PD +L C
Sbjct: 231 DVMGVR-NEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPAC 283
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K+ + +L A SL + K +H +K D + LT Y + +RR+FD
Sbjct: 8 KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+P+ + I W ++R A +G +I+L+ M + PN+ T VL ACS ++
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G++ +S ++ ++ + T +VD ++ G L EA+ +SM D AW ++++GC
Sbjct: 128 GVE-IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Query: 631 KTYKNEQIAERAVKNLWKLAEE 652
Y + + AV+ + ++ EE
Sbjct: 186 SLYG---LCDDAVQLIMQMQEE 204
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 216/743 (29%), Positives = 348/743 (46%), Gaps = 111/743 (14%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+T N + T L L + Q ++ GRA+HG +I+TG L+ Y K
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEA---------QRLFDGMPERNEVSW--- 121
+A+ I + D+V N +I Q G + + R D +P ++
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 122 ------------------------------TALISGFMKHGRVEESMWYFERNPFQNVIS 151
T+L+ + K G VE+ + F P +N +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 152 WTAAICGFVQNGFSFEALK---LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
W+ + G+ G EA+K LFL+ E G + V F+++ + A LG +
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHC 245
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ K G V++ N+L+T+ + + E L E
Sbjct: 246 ITIKNGLLGFVALSNALVTM-------------YSKCE------------------SLNE 274
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++FD +RN ++WS M+ Y+Q+G EA +LF +M KP+ VL+A +
Sbjct: 275 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ L G +H+ +LK+G E+ +F + AL+D+Y+K G D
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD------------------- 375
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
A++ FD + +R+ W+++ISGY+++ + ++ M +G I
Sbjct: 376 ---------------ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN T +SVL A +S+A+LE GK +HG IK GF +V +G+AL+ Y+K G +E V
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLV 480
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F R P+K+ +SW M+ GL+ +G E++ LFEEM + P+++T ++++ ACSH G V
Sbjct: 481 FRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFV 540
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G YFN M + P HY C+VD+LSR+G+L EA++FI S + W LLS
Sbjct: 541 ERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLS 600
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
CK + ++ A + L L + YV LS IY + GR D V K M G+ K
Sbjct: 601 ACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
GCSW+E++NQ H F +P
Sbjct: 661 VGCSWIELKNQYHVFVVGDTMHP 683
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 313/581 (53%), Gaps = 8/581 (1%)
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
++ F+R P + TA LF ++ +GV+P+ TF + K C+
Sbjct: 56 ALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFK-CSS 114
Query: 197 INDFRLGLSVFGLIFKAGFEKHVS-----VCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
+ L + ++ A + V NSLI + +++G AR FD + +D V
Sbjct: 115 SSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAV 174
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
+WT+++ +MG L + + + + P R+ +SW+ +IA Y+++ EA F+ M +
Sbjct: 175 AWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHG 234
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
P+ VLSA A LK L G +H V + G+ + ALID+Y+KCG+ +
Sbjct: 235 IAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQ 294
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD++ SWN++I GY +G ++ A+ LFD M R+ ++++++++GY+ Q
Sbjct: 295 QVFDALGRGPRPQ--SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQ 352
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+F M + T ++L A AS+ +L++G+ LH I + D++LGTA
Sbjct: 353 LREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTA 412
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D Y K G ++ + VF RM ++ +WT M+ GLA +G K ++ F +M PN
Sbjct: 413 LLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPN 472
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
++ ++VL ACSHS L+++G YF+ M +YNI P HY C++D+L RSG L EA D +
Sbjct: 473 SVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLV 532
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
+MP +P++ WAS+LS C+ +K+ +A+ A ++L KL + YV L NIY + +W
Sbjct: 533 KTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWE 592
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+A +R LM E+ ++K+ G S + V QVH F +P+
Sbjct: 593 NASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPR 633
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 239/515 (46%), Gaps = 79/515 (15%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N +I+ I+ G +A+R FD + ++ V+WT LISG K G + ++ + P ++
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRD 203
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
VISWT+ I + + + EA+ F +L G+ P+EVT ++ ACA++ D LG S+
Sbjct: 204 VISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHL 263
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLG 267
L+ + G ++ +LI + K G+ A+ VFD + + SW I+D + + G +
Sbjct: 264 LVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVD 323
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
AR +FDEM R+ ++++ M+ Y SG EA LF M R+ + + +L+A A
Sbjct: 324 VARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACA 383
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
SL AL+ G +HA + + +E D+++ AL+D+Y KCG + +VF + ++DV +
Sbjct: 384 SLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVH---T 440
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
W +MI G NG + A LEH F +M G
Sbjct: 441 WTAMIAGLAFNGMGKAA----------------------LEH---------FYQMRCDGF 469
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN ++ +VL A + L +G +L F + R
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEG--------RLYF--------------------DEMRI 501
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC---SH 564
+++ P + M+ L SG E+++L + M I PN + S+L AC H
Sbjct: 502 LYNIHPQIEH--YGCMIDLLGRSGLLDEAMDLVKTM---PIQPNAVIWASILSACRVHKH 556
Query: 565 SGLVDKGLKYFNSMEP--------IYNIKPNGRHY 591
L ++ +EP +YNI + R +
Sbjct: 557 IDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQW 591
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 20/243 (8%)
Query: 33 SQNLVIQGRALHGHL-IKTGIHKE---RYLTT--RLLIMYLGSRKSLEANEIVKDLNGFD 86
S N +I G HGH+ + + E R + T ++ Y+ S + EA + + D
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD 367
Query: 87 LVVHNC----MINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESM 138
L V N ++ A G L++ + L + +R + TAL+ +MK GRV+E+
Sbjct: 368 LRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE-- 196
F+R ++V +WTA I G NG AL+ F ++ G +PN V++ ++ AC+
Sbjct: 428 IVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSC 487
Query: 197 -INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWT 254
+N+ RL +++ + +I L + G +D A + M + + V W
Sbjct: 488 LLNEGRLYFDEMRILYN--IHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWA 545
Query: 255 VIL 257
IL
Sbjct: 546 SIL 548
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL S + QGRALH + + + + YL T LL MY+ + EA + + +
Sbjct: 374 TVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
Query: 83 NGFDLVVHNCMINANIQWGNLEEA------QRLFDGMPERNEVSWTALISGFMKHGRVEE 136
D+ MI A + + + +A Q DG + N VS+ A+++ + E
Sbjct: 434 GKRDVHTWTAMI-AGLAFNGMGKAALEHFYQMRCDGF-QPNSVSYIAVLTACSHSCLLNE 491
Query: 137 SMWYFER-----NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
YF+ N + + I ++G EA+ L + ++PN V ++SI
Sbjct: 492 GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM---PIQPNAVIWASIL 548
Query: 192 KAC 194
AC
Sbjct: 549 SAC 551
>gi|242045336|ref|XP_002460539.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
gi|241923916|gb|EER97060.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
Length = 630
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 320/618 (51%), Gaps = 46/618 (7%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+ A+ +FD MP R+ V+W A+++ + + G+ +++ F R P
Sbjct: 25 GDAASARAVFDAMPRRDAVAWNAMLTAYARAGQPRDALALFSRAP--------------- 69
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
P+ + ++ A A + G + + + G +
Sbjct: 70 --------------------APDAFSLTAALSAAAALRSPTAGAQLHARLLRVGLRALLP 109
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V NSLI++ K + A F M +R+ +SW +LD ++ DL A+ +FDEMP RN
Sbjct: 110 VGNSLISMYAKCARAEDAARAFGEMRERNALSWCSLLDAYVASDDLRLAQELFDEMPNRN 169
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
V+W+ ++ Y++SG LF +M + + I++ A L +G +H
Sbjct: 170 NVAWNTLLMGYSRSGNANHCLLLFNKMRMAGLTCDDATLCILVDACTELANPSAGSAIHK 229
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
V++ G +SN+LI LY+K D +F+S+ +V +VSWNS+I Y G
Sbjct: 230 IVVQSGWNAMAEVSNSLISLYTKFSLLDDAVRIFESM---EVQTIVSWNSLIDAYMKLGC 286
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLC 459
+E+A LF ++P+ N +SW+A+I G + D +F EML I P+ TF +VL
Sbjct: 287 VEKATSLFGSVPETNVISWTAMIGGLARNGLADEALILFVEMLAHEHIHPDDFTFGAVLH 346
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A A+ ASL G+ +H ++ + GF +++ +L D YAK GD+E VF + +K+ +S
Sbjct: 347 ACATAASLASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNKDLVS 406
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W M+ G A +G E++ +++ M+ + P+E+T +L ACSHSGL++ G +F M
Sbjct: 407 WNTMLFGFAINGLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFFELMV 466
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN---SMPFEPDSNAWASLLSGCK-TYKN 635
++ I+P H +C++DM +RSG +++A + ++ M +S+ +LLS C + N
Sbjct: 467 SVHGIQPKPEHLSCILDMYARSGNITKAMEMLDRYSEMIQTHNSDIREALLSACSLEHLN 526
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+A +AVK++ GYV+LSN++ + G+W A VR M E G++KS GCSW+E
Sbjct: 527 FSVARKAVKDMVATKSAGDVGYVMLSNLFCATGQWNQAERVRIAMAEYGIKKSPGCSWIE 586
Query: 696 VRNQVHFFF---QKTDHN 710
V+ V F Q DH+
Sbjct: 587 VQGAVKVFVSGAQDLDHS 604
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 220/427 (51%), Gaps = 36/427 (8%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V N +I+ + E+A R F M ERN +SW +L+ ++ + + F+ P
Sbjct: 108 LPVGNSLISMYAKCARAEDAARAFGEMRERNALSWCSLLDAYVASDDLRLAQELFDEMPN 167
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N ++W + G+ ++G + L LF K+ +G+ ++ T + AC E+ + G ++
Sbjct: 168 RNNVAWNTLLMGYSRSGNANHCLLLFNKMRMAGLTCDDATLCILVDACTELANPSAGSAI 227
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
++ ++G+ V NSLI+L K +D A +F+ ME + +VSW ++D ++++G +
Sbjct: 228 HKIVVQSGWNAMAEVSNSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKLGCV 287
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSA 325
+A +F +PE N +SW+ MI ++G +EA LF +M + P+ F VL A
Sbjct: 288 EKATSLFGSVPETNVISWTAMIGGLARNGLADEALILFVEMLAHEHIHPDDFTFGAVLHA 347
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+ +L SG VH V + G ++++N+LID+Y+KCG+ + G VF +IV KD +
Sbjct: 348 CATAASLASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNKD---L 404
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN+M+ G+ +NG EA ++D+M K +DV
Sbjct: 405 VSWNTMLFGFAINGLPNEALVVYDSM-KSHDV---------------------------- 435
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIES 504
P++ TF+ +L A + LE GK ++ + G + + D YA+SG+I
Sbjct: 436 --CPDEVTFTGLLTACSHSGLLEHGKTFFELMVSVHGIQPKPEHLSCILDMYARSGNITK 493
Query: 505 SRRVFDR 511
+ + DR
Sbjct: 494 AMEMLDR 500
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 38/313 (12%)
Query: 22 ETCLCLLKDITSQNL-VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
+ LC+L D ++ G A+H ++++G + ++ L+ +Y +A I +
Sbjct: 205 DATLCILVDACTELANPSAGSAIHKIVVQSGWNAMAEVSNSLISLYTKFSLLDDAVRIFE 264
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
+ +V N +I+A ++ G +E+A LF +PE N +SWTA+I G +
Sbjct: 265 SMEVQTIVSWNSLIDAYMKLGCVEKATSLFGSVPETNVISWTAMIGGLAR---------- 314
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIND 199
NG + EAL LF+++L + P++ TF ++ ACA
Sbjct: 315 ---------------------NGLADEALILFVEMLAHEHIHPDDFTFGAVLHACATAAS 353
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G V +F++GF ++ V NSLI + K G+++ +VF + +D+VSW +L
Sbjct: 354 LASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNKDLVSWNTMLFG 413
Query: 260 FIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKP 314
F G EA ++D M +EV+++ ++ + SG E F M + +P
Sbjct: 414 FAINGLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFFELMVSVHGIQP 473
Query: 315 NTSCFSIVLSALA 327
S +L A
Sbjct: 474 KPEHLSCILDMYA 486
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 309/590 (52%), Gaps = 62/590 (10%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+L++ + K G V + F +P ++ISW I + QN EA+ F LL G+KP
Sbjct: 934 SLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKP 993
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
++ T +S+ +AC+ ++ G F G + HV ++K G ++
Sbjct: 994 DQFTLASVLRACSTGDE--------GEYFTLGSQVHV--------YAIKCGIIN------ 1031
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D T ++D++ + G + EA + + + SW+ ++ Y +S +A
Sbjct: 1032 ------DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F M + + + A L L+ G + A+ +K+G D+++S+ ++D+Y
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYI 1145
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ M A ELF + + ++V+W+ +
Sbjct: 1146 KCGD----------------------------------MPNALELFGEISRPDEVAWTTM 1171
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
ISGY+E+ D +V++ M +SG P++ TF++++ AS+ + +LE+GK +H ++KL +
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY 1231
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D F+GT+L D Y K G ++ + RVF +M + + W M+ GLA+ G+ E++NLF
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRT 1291
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ I P+++T + VL ACSHSGL + KYF++M Y I P HY+C+VD L R+G
Sbjct: 1292 MQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAG 1351
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
R+ EAE+ I SMPF+ ++ + +LL C+T + + A+R L L + YVLLSN
Sbjct: 1352 RIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
IYA++ +W D + R +M K ++K G SW++V+N+VH F +P+
Sbjct: 1412 IYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQ 1461
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/575 (24%), Positives = 253/575 (44%), Gaps = 122/575 (21%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF--- 141
DL V ++N ++G + +A+ LFD MPER+ V W ++ ++++ +E++ +F
Sbjct: 750 LDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF 809
Query: 142 ---------------------------ERN------------PFQ---NVISWTAAICGF 159
+R+ PF N+ +W + F
Sbjct: 810 HRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEF 869
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ G A+ F LL S + + VT I A +D LG + L+ K+ F V
Sbjct: 870 LHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVV 929
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V NSL+ + K G V A F + D++S
Sbjct: 930 PVSNSLMNMYSKAGVVYAAEKTFINSPELDLIS--------------------------- 962
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS---LKALRSGM 336
W+ MI+ Y Q+ EA FR + R KP+ + VL A ++ + G
Sbjct: 963 ----WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGS 1018
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VH + +K GI D F+S ALIDLYSK G+ + + + D+A SWN+++ GY
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA---SWNAIMFGYI 1075
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFS 455
+ + +A LEH F++ +EM IP ++ T +
Sbjct: 1076 KSNKSRKA----------------------LEH------FSLMHEM----GIPIDEITLA 1103
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+ + AS + +L++GK + IKLGF D+++ + + D Y K GD+ ++ +F +
Sbjct: 1104 TAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRP 1163
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-Y 574
+E++WT M+ G E+G +++++ M + + P+E T +++ A S +++G + +
Sbjct: 1164 DEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH 1223
Query: 575 FNSMEPIYNIKPNGRHY--TCVVDMLSRSGRLSEA 607
N ++ Y++ H+ T +VDM + G + +A
Sbjct: 1224 ANVVKLDYSLD----HFVGTSLVDMYCKCGSVQDA 1254
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 187/396 (47%), Gaps = 42/396 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI + K G+++E+ + ++ SW A + G++++ S +AL+ F + E G+
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+E+T ++ KA + + + G + K GF + V +
Sbjct: 1097 IDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSG----------------- 1139
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
+LD++I+ GD+ A +F E+ +EV+W+ MI+ Y ++G + A
Sbjct: 1140 --------------VLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHAL 1185
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
++ M +P+ F+ ++ A + L AL G +HA+V+K+ D F+ +L+D+Y
Sbjct: 1186 SVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMY 1245
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDV 417
KCG +D VF + DV VV WN+M+ G +G ++EA LF M + + V
Sbjct: 1246 CKCGSVQDAYRVFRKM---DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKV 1302
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
++ ++S F + F+ M + G P +S ++ A +++ +++
Sbjct: 1303 TFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV--- 1359
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
I + F + AL GD E+++RV D++
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 206/491 (41%), Gaps = 89/491 (18%)
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
++ + D +LG I +G + N+LIT+ K G + AR VFD+ RD+V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE--EAFRLFRQMTR 309
+W IL + + D S Y E FRLF +
Sbjct: 679 TWNSILAAYAQFAD----------------------------SSYENVLEGFRLFGLLRE 710
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+ F + +L ++ VH + +KIG E D+F+S AL+++Y K G
Sbjct: 711 FGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQ 770
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF--------------------- 408
RL+FD + E+D V WN M+ Y N +EA F
Sbjct: 771 ARLLFDKMPERD---AVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGG 827
Query: 409 -----DNMPKR-------------------NDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
N KR N +W+ ++ +L Q F +L
Sbjct: 828 VNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR 887
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
S + T +L A+ L+ G+ +H +IK F V + +L + Y+K+G + +
Sbjct: 888 STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYA 947
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ + F P+ + ISW M+ A++ E+I F ++ + + P++ T+ SVL ACS
Sbjct: 948 AEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007
Query: 565 SGLVDKGLKYFN--SMEPIYNIK----PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
D+G +YF S +Y IK + T ++D+ S+ G++ EAE F+ ++
Sbjct: 1008 G---DEG-EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE-FLLHGKYDF 1062
Query: 619 DSNAWASLLSG 629
D +W +++ G
Sbjct: 1063 DLASWNAIMFG 1073
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 99/265 (37%), Gaps = 71/265 (26%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F + I+ CL + QG+ +H +++K + ++ T L+ MY
Sbjct: 1200 EYTFATLIKASSCL-------TALEQGKQIHANVVKLDYSLDHFVGTSLVDMY------- 1245
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ G++++A R+F M R V W A++ G +HG
Sbjct: 1246 ------------------------CKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
V+ EAL LF + +G++P++VTF + A
Sbjct: 1282 VD-------------------------------EALNLFRTMQSNGIQPDKVTFIGVLSA 1310
Query: 194 CAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVV 251
C+ F F +FK G + + L+ + G + A +V M K
Sbjct: 1311 CSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASAS 1370
Query: 252 SWTVILDVFIEMGDLGEARRIFDEM 276
+ +L GD A+R+ D++
Sbjct: 1371 MYRALLGACRTKGDAETAKRVADKL 1395
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 292/562 (51%), Gaps = 48/562 (8%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV--TFSSICKACAEINDFRLGLSVFGL 209
W I G +A+ LFL++ S + V + + K+CA + LG S+ L
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
++G N+L+ L K + S D + I+DV
Sbjct: 76 AIRSGAFADRFTANALLNLYCK-----VPCSYLDS-------TGVAIVDVPGSSTAFESV 123
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R++FDEM ER+ VSW+ ++ + G EA R+M R F+P++ S VL A
Sbjct: 124 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAEC 183
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
++ G+ VH + G + DVF+ ++LID+Y+ C T VFD++ +D H++ WN
Sbjct: 184 ADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD--HIL-WN 240
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
S++ G NG +EEA +F ML +G P
Sbjct: 241 SLLAGCAQNGSVEEA-------------------------------LGIFRRMLQAGVRP 269
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
TFSS++ ++ASL GK LH +I GF +VF+ ++L D Y K G+I + +F
Sbjct: 270 VPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIF 329
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
D+M + +SWT M+ G A G A+E++ LFE ME + PN +T L+VL ACSH+GLVD
Sbjct: 330 DKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVD 389
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
KG KYF SM Y I P H+ + D L R+G L EA +FI+ M +P ++ W++LL
Sbjct: 390 KGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRA 449
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ +KN +AE K + +L +V+LSN+Y+++GRW +A ++R+ M +KG++K
Sbjct: 450 CRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDP 509
Query: 690 GCSWVEVRNQVHFFFQKTDHNP 711
CSW+EV++++H F +P
Sbjct: 510 ACSWIEVKSKLHVFVAHDRSHP 531
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 228/566 (40%), Gaps = 122/566 (21%)
Query: 5 LRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
LR S P +S + + L K + L G +LH I++G +R+ LL
Sbjct: 37 LRMRASAAPRSSVPASLPAAL---KSCAALGLSALGASLHALAIRSGAFADRFTANALLN 93
Query: 65 MYLGSRKS-LEANEI-VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
+Y S L++ + + D+ G E +++FD M ER+ VSW
Sbjct: 94 LYCKVPCSYLDSTGVAIVDVPGSSTA--------------FESVRKVFDEMIERDVVSWN 139
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
L + G + G EAL K+ G +P
Sbjct: 140 TL-------------------------------VLGCAEEGRHHEALGFVRKMCREGFRP 168
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T S++ AE D + GL V G F+ GF+ V V +SLI + D +
Sbjct: 169 DSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSV--- 225
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
++FD +P R+ + W+ ++A Q+G EEA
Sbjct: 226 ----------------------------KVFDNLPVRDHILWNSLLAGCAQNGSVEEALG 257
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+FR+M + +P FS ++ +L +LR G +HA+V+ G E +VFIS++LID+Y
Sbjct: 258 IFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYC 317
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCGE +FD + D VVSW +MI GY L+G EA LF+ M
Sbjct: 318 KCGEISIAHCIFDKMSSPD---VVSWTAMIMGYALHGPAREALVLFERME---------- 364
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLG 481
L PN TF +VL A + ++KG K G
Sbjct: 365 ---------------------LGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYG 403
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGL---AESGYAKESI 537
+ AL DT ++G+++ + +M K S W+ ++R + A+E
Sbjct: 404 IVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVA 463
Query: 538 NLFEEMEKTSITPNELTILSVLFACS 563
E+E SI + +LS +++ S
Sbjct: 464 KKIMELEPRSIGSH--VVLSNMYSAS 487
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 158/350 (45%), Gaps = 24/350 (6%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
++LI + R + S+ F+ P ++ I W + + G QNG EAL +F ++L++GV+
Sbjct: 209 SSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVR 268
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P VTFSS+ C + R G + + GFE +V + +SLI + K GE+ +A +
Sbjct: 269 PVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCI 328
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYP 297
FD+M DVVSWT ++ + G EA +F+ M + N +++ ++ + +G
Sbjct: 329 FDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLV 388
Query: 298 EEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
++ ++ F+ M+ Y P F+ + L L + + K+ I+ + +
Sbjct: 389 DKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNF---ISKMQIKPTASVWST 445
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN- 415
L+ T V I+E + + S + Y +G+ EA L ++M K+
Sbjct: 446 LLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGM 505
Query: 416 ----DVSWSAI-------ISGYLEHKQFDLVFAVFN----EMLLSGEIPN 450
SW + ++ H +D + N +M G +PN
Sbjct: 506 KKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPN 555
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 137/332 (41%), Gaps = 56/332 (16%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V +G +HG + G + ++ + L+ MY ++ + ++ +L D ++ N ++
Sbjct: 186 VKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAG 245
Query: 97 NIQWGNLEEAQRLFDGM----------------P-----------------------ERN 117
Q G++EEA +F M P E N
Sbjct: 246 CAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDN 305
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
++LI + K G + + F++ +V+SWTA I G+ +G + EAL LF ++
Sbjct: 306 VFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMEL 365
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL------K 231
KPN +TF ++ AC+ GL G + H + +L + +
Sbjct: 366 GNAKPNHITFLAVLTACSHA-----GLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGR 420
Query: 232 MGEVDLARSVFDRMEKRDVVS-WTVILDVFIEMGD--LGE--ARRIFDEMPERNEVSWSV 286
GE+D A + +M+ + S W+ +L + L E A++I E+ R+ S V
Sbjct: 421 AGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIM-ELEPRSIGSHVV 479
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ Y+ SG EA L M + K + +C
Sbjct: 480 LSNMYSASGRWNEAAHLRESMRKKGMKKDPAC 511
>gi|359481504|ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 182/500 (36%), Positives = 278/500 (55%), Gaps = 26/500 (5%)
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG-----D 265
FK E H CN L R+ R + T IL+ I
Sbjct: 15 FKPQRETHALACNQL--------------KESQRIHGRAIKLGTTILEPDIVCSYSASKA 60
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L +A ++FDE+P + VS + I + + + EEA F +M + KPN F V+ +
Sbjct: 61 LWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPS 120
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+L+ L SG +HA +K+G+E +VF+ +A++D Y+K + + F+ E +V
Sbjct: 121 STALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNV--- 177
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ ++I GY + ++A LF MP+RN VSW+A+ISGY + + +F ML
Sbjct: 178 VSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLRE 237
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G +PN+ TF + A A++A+L G+ HG +K +DVF+G +L YAK G +E S
Sbjct: 238 GTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEES 297
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF+ +P KN +SW ++ G A G E+I FE+M+ T + PN +T+L +L AC+HS
Sbjct: 298 LLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHS 357
Query: 566 GLVDKGLKYFNS--MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
GLVDKG YFN +E + P H+ C+VD+LSRSGR EAE F++ +PF P W
Sbjct: 358 GLVDKGYSYFNKARVEEPGLLTP--EHHACMVDLLSRSGRFKEAEKFLHELPFVPGIGFW 415
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL GC+ + N ++ E A + + L E + YV+LSN +++AGRW +RK M EK
Sbjct: 416 KALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVSMIRKEMREK 475
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
++ G SW+E+R++VH F
Sbjct: 476 RMKGVPGSSWIEIRSKVHIF 495
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 151/271 (55%), Gaps = 3/271 (1%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +V+S TA I F + EA+ F ++L +KPN+ +F ++ + + D
Sbjct: 68 FDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDL 127
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + K G E +V V ++++ K+ ++ A+ F+ + +VVS+T ++ +
Sbjct: 128 NSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGY 187
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
++ +A +F +MPERN VSW+ MI+ Y+Q GY EEA LF M R PN F
Sbjct: 188 LKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTFP 247
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+SA+A++ AL G H +K + DVFI N+L+ Y+KCG ++ LVF+++ +K
Sbjct: 248 CAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKK 307
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ +VSWN++I GY +G+ EA F+ M
Sbjct: 308 N---IVSWNALICGYANHGRGMEAIYFFEKM 335
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 5/244 (2%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
L S + L A I L ++ V + +++ + ++ EAQ+ F+ E N VS+T LI
Sbjct: 127 LNSGRQLHACAIKMGLES-NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIR 185
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G++K R ++++ F + P +NV+SW A I G+ Q G++ EA+ LF+ +L G PNE T
Sbjct: 186 GYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERT 245
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F A A I +G S G K + V + NSL++ K G ++ + VF+ +
Sbjct: 246 FPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLP 305
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFR 302
K+++VSW ++ + G EA F++M + N V+ ++ N SG ++ +
Sbjct: 306 KKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHSGLVDKGYS 365
Query: 303 LFRQ 306
F +
Sbjct: 366 YFNK 369
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 209/730 (28%), Positives = 355/730 (48%), Gaps = 111/730 (15%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F S ++ C +++LV+ G+ +HG ++ TG + ++ L+I+Y
Sbjct: 10 EFAFPSVLKAC------TVTKDLVL-GKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFG 62
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP------------------- 114
+A + + +V N + + + EA LF M
Sbjct: 63 DARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT 122
Query: 115 --------------------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
+ + S AL+ + K G +E++ F+ +++SW A
Sbjct: 123 GLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNA 182
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I G V + + AL+L ++ +SG+ PN T SS KACA + LG + + K
Sbjct: 183 IIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK-- 240
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+ MG D ++D++ + + +AR +F
Sbjct: 241 ---------------MDMGS--------------DSFLGVGLIDMYSKCNSMDDARLVFK 271
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
MPER+ ++W+ +I+ ++Q+ EEA LF M N + S VL ++A+L+A
Sbjct: 272 LMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYM 331
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+HA LK G E D ++ N+LID
Sbjct: 332 CRQIHALSLKSGFEFDNYVVNSLIDT---------------------------------- 357
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
YG G +E+A +F+ P + V ++++++ Y + Q + ++ EM G P+
Sbjct: 358 YGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVC 417
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
SS+L A AS+++ E+GK +H I+K GF D+F G +L + YAK G IE + F R+P
Sbjct: 418 SSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
+ +SW+ M+ GLA+ GY KE++ LF++M K + PN +T++SVL AC+H+GLV + Y
Sbjct: 478 RGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHY 537
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
FNSM+ ++ I+P HY C++D+L R+G+L A + +N MPF+ ++ W +LL + +K
Sbjct: 538 FNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHK 597
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N + E+A + L L E +VLL+NIYAS G W VR+LM + ++K G SW+
Sbjct: 598 NIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWL 657
Query: 695 EVRNQVHFFF 704
EV+++V+ F
Sbjct: 658 EVKDKVYTFI 667
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/530 (27%), Positives = 227/530 (42%), Gaps = 101/530 (19%)
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G+K NE F S+ KAC D LG V G++ GF+ V NSL+ L K G A
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
RS+FD + R VVSW + ++ GE
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGE------------------------------ 94
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A LF M +PN S +++ L+ G +H +++K+G + D F +NAL+
Sbjct: 95 -AVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALV 153
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+Y+K G +D VFD I + D +VSWN++I G L+ A EL M K
Sbjct: 154 DMYAKVGILEDASSVFDEIAKPD---IVSWNAIIAGCVLHEYHHRALELLREMNK----- 205
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
SG PN T SS L A A +A E G+ LH +I
Sbjct: 206 --------------------------SGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
K+ D FLG L D Y+K ++ +R VF MP+++ I+W ++ G +++ +E+ +
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299
Query: 539 LFEEMEKTSITPNELTILSVL---------FACS--HSGLVDKGLKY----FNSMEPIY- 582
LF M I N+ T+ +VL + C H+ + G ++ NS+ Y
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYG 359
Query: 583 ---NIKPNGR-----------HYTCVVDMLSRSGRLSEAEDFINSMP---FEPDSNAWAS 625
+++ R +T +V ++ G+ EA M +PDS +S
Sbjct: 360 KCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSS 419
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLA--EEHPAGYVLLSNIYASAGRWIDA 673
LL+ C + + ++ ++ K + AG L+ N+YA G DA
Sbjct: 420 LLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLV-NMYAKCGSIEDA 468
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 7/229 (3%)
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M L G N+ F SVL A L GK +HG ++ GF D F+ +L YAK G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+R +FD +PD++ +SW + S E+++LF +M + I PNE ++ S++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 562 CSHSGLVD--KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
C +GL D +G K + + + +VDM ++ G L +A + + +PD
Sbjct: 121 C--TGLEDSVQGRKIHGYLIKL-GYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPD 176
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+W ++++GC ++ A ++ + K + P + L S + A AG
Sbjct: 177 IVSWNAIIAGCVLHEYHHRALELLREMNK-SGMCPNMFTLSSALKACAG 224
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 309/590 (52%), Gaps = 62/590 (10%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+L++ + K G V + F +P ++ISW I + QN EA+ F LL G+KP
Sbjct: 934 SLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKP 993
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
++ T +S+ +AC+ ++ G F G + HV ++K G ++
Sbjct: 994 DQFTLASVLRACSTGDE--------GEYFTLGSQVHV--------YAIKCGIIN------ 1031
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D T ++D++ + G + EA + + + SW+ ++ Y +S +A
Sbjct: 1032 ------DSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F M + + + A L L+ G + A+ +K+G D+++S+ ++D+Y
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYI 1145
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ M A ELF + + ++V+W+ +
Sbjct: 1146 KCGD----------------------------------MPNALELFGEISRPDEVAWTTM 1171
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
ISGY+E+ D +V++ M +SG P++ TF++++ AS+ + +LE+GK +H ++KL +
Sbjct: 1172 ISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY 1231
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D F+GT+L D Y K G ++ + RVF +M + + W M+ GLA+ G+ E++NLF
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRT 1291
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M+ I P+++T + VL ACSHSGL + KYF++M Y I P HY+C+VD L R+G
Sbjct: 1292 MQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAG 1351
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
R+ EAE+ I SMPF+ ++ + +LL C+T + + A+R L L + YVLLSN
Sbjct: 1352 RIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
IYA++ +W D + R +M K ++K G SW++V+N+VH F +P+
Sbjct: 1412 IYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQ 1461
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/575 (24%), Positives = 253/575 (44%), Gaps = 122/575 (21%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF--- 141
DL V ++N ++G + +A+ LFD MPER+ V W ++ ++++ +E++ +F
Sbjct: 750 LDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF 809
Query: 142 ---------------------------ERN------------PFQ---NVISWTAAICGF 159
+R+ PF N+ +W + F
Sbjct: 810 HRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEF 869
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ G A+ F LL S + + VT I A +D LG + L+ K+ F V
Sbjct: 870 LHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVV 929
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V NSL+ + K G V A F + D++S
Sbjct: 930 PVSNSLMNMYSKAGVVYAAEKTFINSPELDLIS--------------------------- 962
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS---LKALRSGM 336
W+ MI+ Y Q+ EA FR + R KP+ + VL A ++ + G
Sbjct: 963 ----WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGS 1018
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VH + +K GI D F+S ALIDLYSK G+ + + + D+A SWN+++ GY
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA---SWNAIMFGYI 1075
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFS 455
+ + +A LEH F++ +EM IP ++ T +
Sbjct: 1076 KSNKSRKA----------------------LEH------FSLMHEM----GIPIDEITLA 1103
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+ + AS + +L++GK + IKLGF D+++ + + D Y K GD+ ++ +F +
Sbjct: 1104 TAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRP 1163
Query: 516 NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK-Y 574
+E++WT M+ G E+G +++++ M + + P+E T +++ A S +++G + +
Sbjct: 1164 DEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH 1223
Query: 575 FNSMEPIYNIKPNGRHY--TCVVDMLSRSGRLSEA 607
N ++ Y++ H+ T +VDM + G + +A
Sbjct: 1224 ANVVKLDYSLD----HFVGTSLVDMYCKCGSVQDA 1254
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 187/396 (47%), Gaps = 42/396 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI + K G+++E+ + ++ SW A + G++++ S +AL+ F + E G+
Sbjct: 1037 TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIP 1096
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+E+T ++ KA + + + G + K GF + V +
Sbjct: 1097 IDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSG----------------- 1139
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
+LD++I+ GD+ A +F E+ +EV+W+ MI+ Y ++G + A
Sbjct: 1140 --------------VLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHAL 1185
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
++ M +P+ F+ ++ A + L AL G +HA+V+K+ D F+ +L+D+Y
Sbjct: 1186 SVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMY 1245
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDV 417
KCG +D VF + DV VV WN+M+ G +G ++EA LF M + + V
Sbjct: 1246 CKCGSVQDAYRVFRKM---DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKV 1302
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
++ ++S F + F+ M + G P +S ++ A +++ +++
Sbjct: 1303 TFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV--- 1359
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
I + F + AL GD E+++RV D++
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 206/491 (41%), Gaps = 89/491 (18%)
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
++ + D +LG I +G + N+LIT+ K G + AR VFD+ RD+V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE--EAFRLFRQMTR 309
+W IL + + D S Y E FRLF +
Sbjct: 679 TWNSILAAYAQFAD----------------------------SSYENVLEGFRLFGLLRE 710
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+ F + +L ++ VH + +KIG E D+F+S AL+++Y K G
Sbjct: 711 FGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQ 770
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF--------------------- 408
RL+FD + E+D V WN M+ Y N +EA F
Sbjct: 771 ARLLFDKMPERD---AVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGG 827
Query: 409 -----DNMPKR-------------------NDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
N KR N +W+ ++ +L Q F +L
Sbjct: 828 VNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR 887
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
S + T +L A+ L+ G+ +H +IK F V + +L + Y+K+G + +
Sbjct: 888 STIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYA 947
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ + F P+ + ISW M+ A++ E+I F ++ + + P++ T+ SVL ACS
Sbjct: 948 AEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACST 1007
Query: 565 SGLVDKGLKYFN--SMEPIYNIK----PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
D+G +YF S +Y IK + T ++D+ S+ G++ EAE F+ ++
Sbjct: 1008 G---DEG-EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE-FLLHGKYDF 1062
Query: 619 DSNAWASLLSG 629
D +W +++ G
Sbjct: 1063 DLASWNAIMFG 1073
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 99/265 (37%), Gaps = 71/265 (26%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F + I+ CL + QG+ +H +++K + ++ T L+ MY
Sbjct: 1200 EYTFATLIKASSCL-------TALEQGKQIHANVVKLDYSLDHFVGTSLVDMY------- 1245
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ G++++A R+F M R V W A++ G +HG
Sbjct: 1246 ------------------------CKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGH 1281
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
V+ EAL LF + +G++P++VTF + A
Sbjct: 1282 VD-------------------------------EALNLFRTMQSNGIQPDKVTFIGVLSA 1310
Query: 194 CAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVV 251
C+ F F +FK G + + L+ + G + A +V M K
Sbjct: 1311 CSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASAS 1370
Query: 252 SWTVILDVFIEMGDLGEARRIFDEM 276
+ +L GD A+R+ D++
Sbjct: 1371 MYRALLGACRTKGDAETAKRVADKL 1395
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 311/595 (52%), Gaps = 44/595 (7%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES--- 178
+ LIS + + R +++ F+ +N S+ A + + F+A LFL + S
Sbjct: 61 SKLISFYTRQNRFHQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 179 ---GVKPNEVTFSSICKACAEINDFRLG---LSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
+P+ ++ S + KA + +DF LG V G + + G + V V N LIT K
Sbjct: 121 SSGAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGSDSDVFVGNGLITYYTKC 180
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
++ AR++FDEM +R+ VSW+ MI+ Y+
Sbjct: 181 DNIE-------------------------------SARKVFDEMSDRDVVSWNSMISGYS 209
Query: 293 QSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
QSG E+ +L++ M S FKPN VL A L GM VH +++ I+ D+
Sbjct: 210 QSGSFEDCKKLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIENHIQMDL 269
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ NA+I Y+KCG R +FD + EKD V++ ++I GY +G ++EA LF M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDS---VTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
+W+A+ISG +++ + V F EM+ G PN T SS+L + ++L+ GK
Sbjct: 327 ESIGLSTWNAVISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H I+ G ++++ T++ D YAK G + ++RVFD D++ I WT ++ A G
Sbjct: 387 EIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHG 446
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ + +LF++M+ P+ +T+ +VL A +HSG DK F+SM YNI+P HY
Sbjct: 447 DSDSACSLFDQMQCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNIEPGVEHY 506
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
C+V +LSR+G+LS A +FI+ MP EP + W +LL+G + +IA A L+++
Sbjct: 507 ACMVSVLSRAGKLSNAMEFISKMPIEPIAKVWGALLNGASVLGDVEIARFACDRLFEMEP 566
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
E+ Y +++N+Y AGRW +A VR M GL+K G SW+E + F K
Sbjct: 567 ENTGNYTIMANLYTQAGRWEEAEVVRDKMKRIGLKKIPGTSWIETNKGLRSFIAK 621
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 238/492 (48%), Gaps = 46/492 (9%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
+LGS +++ + D+ V N +I + N+E A+++FD M +R+ VSW ++I
Sbjct: 146 WLGSLARQVHGFVIRGGSDSDVFVGNGLITYYTKCDNIESARKVFDEMSDRDVVSWNSMI 205
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNE 184
SG+ + G E+ KL+ +L S KPNE
Sbjct: 206 SGYSQSGSFEDCK-------------------------------KLYKAMLGCSDFKPNE 234
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
VT S+ +AC + +D G+ V + + + +S+CN++I K G +D AR++FD
Sbjct: 235 VTVISVLQACGQSSDLVFGMEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDE 294
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M ++D V++ I+ ++ G + EA +F EM +W+ +I+ Q+ + EE F
Sbjct: 295 MSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAVISGLMQNNHHEEVINSF 354
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
R+M R +PNT S +L +L L+ G +HA ++ G + +++++ ++ID Y+K
Sbjct: 355 REMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGSDNNIYVTTSIIDNYAKL 414
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWS 420
G + VFD+ ++ ++ W ++I Y ++G + A LFD M K ++V+ +
Sbjct: 415 GFLLGAQRVFDNCKDRS---LIVWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDNVTLT 471
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
A++S + D +F+ ML I P ++ ++ + L + I K
Sbjct: 472 AVLSAFAHSGDSDKAQHIFDSMLTKYNIEPGVEHYACMVSVLSRAGKLSNAMEF---ISK 528
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDR---MPDKNEISWTVMVRGLAESGYAKES 536
+ + AL + + GD+E +R DR M +N ++T+M ++G +E+
Sbjct: 529 MPIEPIAKVWGALLNGASVLGDVEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEA 588
Query: 537 INLFEEMEKTSI 548
+ ++M++ +
Sbjct: 589 EVVRDKMKRIGL 600
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 309/578 (53%), Gaps = 12/578 (2%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN-D 199
F+R P + TA F + + L+ ++ V P+ TF + K CA
Sbjct: 60 FDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAH 119
Query: 200 FRLGLSVFGLIFKAGFEKHVS-VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
LG + F+ V + + +I + ++G AR FD +DVV+WT ++
Sbjct: 120 VLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVIS 179
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+MG L +ARR+ P RN V+W+ +I+ Y+++G EA F M P+
Sbjct: 180 GLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVT 239
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN----ALIDLYSKCGETKDGRLVF 374
+LSA LK L G +H + +G +K + +S+ ALID+Y+KCG+T R VF
Sbjct: 240 VIGMLSACGQLKDLNFGCSLH---MLVG-DKRMLMSDKLVVALIDMYAKCGDTGRAREVF 295
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D++ WN+MI GY G ++ A+ LFD M + ++++++I+GY+ +
Sbjct: 296 DALGRGRGPQ--PWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLRE 353
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F +M G + T +L ASAS+ +L +G+ LH I + DV+LGTAL D
Sbjct: 354 ALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLD 413
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K G +E + F +M ++ +W+ M+ GLA +G K ++ F M+ N +T
Sbjct: 414 MYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVT 473
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
++VL ACSHS L+D+G YF+ M ++NI+P HY C++D+L RSG L EA D + +M
Sbjct: 474 YIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTM 533
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P +P++ WAS+LS C+ +KN +A+ A +L KL A YV + NIY + +W DA
Sbjct: 534 PMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDAS 593
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R+LM ++G++K+ G S + V QVH F +P+
Sbjct: 594 KIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQ 631
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 185/357 (51%), Gaps = 8/357 (2%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
+I+ + G +A+R FD ++ V+WT +ISG K G ++++ R P +NV++W
Sbjct: 146 IIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTW 205
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
T I G+ + G + EA+ F +L G+ P+EVT + AC ++ D G S+ L+
Sbjct: 206 TGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGD 265
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLGEARR 271
+ +LI + K G+ AR VFD + + R W ++D + ++G + AR
Sbjct: 266 KRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARS 325
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FD+M + + ++++ +I Y G EA LF +M R+ + +L+A ASL A
Sbjct: 326 LFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGA 385
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G +HA + + +E+DV++ AL+D+Y KCG ++ + F + +DV +W++M
Sbjct: 386 LPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVH---TWSAM 442
Query: 392 IGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
IGG NG + A E F M N V++ A+++ D F+EM L
Sbjct: 443 IGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRL 499
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 172/400 (43%), Gaps = 49/400 (12%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A +FD MP + + + A + S P+ L+R+M P+ F + A
Sbjct: 56 ALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCA- 114
Query: 329 LKALRSGMHV------HAHVLKIGIEKDV-FISNALIDLYSKCGETKDGRLVFDSIVEKD 381
R G HV HA + + V I++ +I +Y++ G D R FD E
Sbjct: 115 ----RGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFD---EAS 167
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V VV+W ++I G G +++A+ L P RN V+W+ +ISGY + FN
Sbjct: 168 VKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNS 227
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLH----------------------GKIIK 479
ML G P++ T +L A + L G LH K
Sbjct: 228 MLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGD 287
Query: 480 LGFPYDVF--LG--------TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
G +VF LG A+ D Y K G ++ +R +FD+M D + I++ ++ G
Sbjct: 288 TGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIH 347
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
G +E++ LF +M + + + T++ +L A + G + +G +E ++ +
Sbjct: 348 GGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRL-VERDVY 406
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T ++DM + GR+ EA M D + W++++ G
Sbjct: 407 LGTALLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMIGG 445
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 14/182 (7%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL S + QGRALH + + + ++ YL T LL MY+ + EA K +
Sbjct: 372 TMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQM 431
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLF-----DGMPERNEVSWTALISGFMKHGRVEES 137
+ D+ + MI G + A F DG N V++ A+++ ++E
Sbjct: 432 SVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGF-HANSVTYIAVLTACSHSCLLDEG 490
Query: 138 MWYFE-----RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
YF+ N + + I ++G EA+ L + ++PN V ++SI
Sbjct: 491 RLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTM---PMQPNAVIWASILS 547
Query: 193 AC 194
AC
Sbjct: 548 AC 549
>gi|297846216|ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/644 (31%), Positives = 345/644 (53%), Gaps = 49/644 (7%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G L+EA+ LF+ MPERN V+ A+++G++K R+ E+ F P +NV+SWT +
Sbjct: 121 GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRLNEAWTLFREMP-KNVVSWTVMLTALC 179
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+G S +A++LF ++ E N V+++++ + V F A +
Sbjct: 180 DDGRSDDAVELFDEMPER----NVVSWNTLVTGLIRNGETEKAKQV----FDAMPSRDAV 231
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
N++I ++ G ++ A+ +F+ M +++VV+WT ++ + GD+ EA R+F EMPERN
Sbjct: 232 SWNAMIKGYIENGGMEEAKLLFENMSEKNVVTWTSMVYGYCRYGDVHEAYRLFCEMPERN 291
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFSIVLSALASLKA--LRSGM 336
VSW+ MI+ + + + EA LF +M + + PN + A L R G
Sbjct: 292 VVSWTAMISGFAWNEFYREALMLFLEMKKDVDAISPNGETLISLAYACGGLGVGFRRLGE 351
Query: 337 HVHAHVLKIG---IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV-------- 385
+HA V+ G ++ D ++ +L+ +Y+ G + + + + ++
Sbjct: 352 QLHAQVISNGWESVDHDGRLAKSLVHMYASFGLIASAQSLLNESFDLQSCNIIISAYLKN 411
Query: 386 -------------------VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
VSW SMI GY G + A +LF + ++ V+W+ +ISG
Sbjct: 412 GDFERAETLFRRVESLHDKVSWTSMIDGYLDAGDVSRAFDLFQKLHDKDGVTWTVMISGL 471
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY-- 484
++++ F ++ ++M+ G P ST+S +L ++ + ++L++GK LH I K Y
Sbjct: 472 VQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHLHCVIAKTTACYDP 531
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D+ L +L YAK G I+ + +F +M K+ +SW ++ GL+ G A +++ LF+EM
Sbjct: 532 DLILQNSLVSMYAKCGAIDDAYEIFSKMVRKDIVSWNSVIIGLSHHGLADKALKLFKEML 591
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + PN +T L VL ACSHSGL+ KGL+ F +M+ Y+I+P HY ++D+L R+G+L
Sbjct: 592 DSGMKPNSVTFLGVLSACSHSGLITKGLELFKAMKETYSIQPGVEHYISMIDLLGRAGKL 651
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGC----KTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
EAE+FI+++PF PD + +LL C + IAERA L +L + G+V L
Sbjct: 652 KEAEEFISALPFTPDHTVYGALLGLCGLNWRDRDAAGIAERAAMRLLELDPVNAPGHVAL 711
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
N+YA GR +RK M KG++K+ GCSWV V + + F
Sbjct: 712 CNMYAGLGRHEMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFL 755
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 232/486 (47%), Gaps = 86/486 (17%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+A ++ + D V N MI I+ G +EEA+ LF+ M E+N V+WT+++ G+ ++G
Sbjct: 217 KAKQVFDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMSEKNVVTWTSMVYGYCRYGD 276
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--SGVKPNEVTFSSIC 191
V E+ F P +NV+SWTA I GF N F EAL LFL++ + + PN T S+
Sbjct: 277 VHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREALMLFLEMKKDVDAISPNGETLISLA 336
Query: 192 KACAEI------------------------NDFRLGLSV------FGLIFKA------GF 215
AC + +D RL S+ FGLI A F
Sbjct: 337 YACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASFGLIASAQSLLNESF 396
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLGEARRIFD 274
+ + CN +I+ LK G+ + A ++F R+E D VSWT ++D +++ GD+ A +F
Sbjct: 397 D--LQSCNIIISAYLKNGDFERAETLFRRVESLHDKVSWTSMIDGYLDAGDVSRAFDLFQ 454
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
++ +++ V+W+VMI+ Q+ EA L M R KP S +S++LS+ + L
Sbjct: 455 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 514
Query: 335 GMHVHAHVLKIGI--EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G H+H + K + D+ + N+L+ +Y+KCG D +F +V KD +VSWNS+I
Sbjct: 515 GKHLHCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMVRKD---IVSWNSVI 571
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
G +G ++A +L F EML SG PN
Sbjct: 572 IGLSHHGLADKALKL-------------------------------FKEMLDSGMKPNSV 600
Query: 453 TFSSVLCASASVASLEKGKDLHGKI-----IKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
TF VL A + + KG +L + I+ G + + ++ D ++G ++ +
Sbjct: 601 TFLGVLSACSHSGLITKGLELFKAMKETYSIQPGVEHYI----SMIDLLGRAGKLKEAEE 656
Query: 508 VFDRMP 513
+P
Sbjct: 657 FISALP 662
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 233/506 (46%), Gaps = 89/506 (17%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
I + G V C SL+T K G +D AR +F+ M +R++V+ +L +++ L EA
Sbjct: 98 IPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRLNEA 157
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F EMP +N VSW+VM+ G ++A LF +M + N ++ +++ L
Sbjct: 158 WTLFREMP-KNVVSWTVMLTALCDDGRSDDAVELFDEMP----ERNVVSWNTLVTGL--- 209
Query: 330 KALRSGMHVHA-HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+R+G A V +D NA+I Y + G ++ +L+F+++ EK+ VV+W
Sbjct: 210 --IRNGETEKAKQVFDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMSEKN---VVTW 264
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML--LSG 446
SM+ GY G + EA LF MP+RN VSW+A+ISG+ ++ + +F EM +
Sbjct: 265 TSMVYGYCRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREALMLFLEMKKDVDA 324
Query: 447 EIPNKSTFSSV--LCASASVASLEKGKDLHGKIIKLGFP---YDVFLGTALTDTYA---- 497
PN T S+ C V G+ LH ++I G+ +D L +L YA
Sbjct: 325 ISPNGETLISLAYACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASFGL 384
Query: 498 -------------------------KSGDIESSRRVFDRMPD-KNEISWTVMVRGLAESG 531
K+GD E + +F R+ +++SWT M+ G ++G
Sbjct: 385 IASAQSLLNESFDLQSCNIIISAYLKNGDFERAETLFRRVESLHDKVSWTSMIDGYLDAG 444
Query: 532 YAKESINLFEEM-EKTSITPNELT---ILSVLFACSHSGLVDK---GLKYFNSMEPIY-- 582
+ +LF+++ +K +T + + + LFA + S L D GLK NS +
Sbjct: 445 DVSRAFDLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 504
Query: 583 ------NIKPNGRHYTCV------------------VDMLSRSGRLSEAEDFINSMPFEP 618
N+ G+H CV V M ++ G + +A + + M
Sbjct: 505 SAGATSNLD-QGKHLHCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKM-VRK 562
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
D +W S++ G + +A++A+K
Sbjct: 563 DIVSWNSVIIG---LSHHGLADKALK 585
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 112/216 (51%), Gaps = 15/216 (6%)
Query: 370 GRLVFDSIVEK-DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
R + D I ++ ++ V+ S++ Y G ++EA+ LF+ MP+RN V+ +A+++GY++
Sbjct: 91 ARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNAMLTGYVK 150
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
++ + + +F EM N +++ +L A + +L ++ + +V
Sbjct: 151 CRRLNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSDDAVELFDEMPE----RNVVS 201
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
L ++G+ E +++VFD MP ++ +SW M++G E+G +E+ LFE M +
Sbjct: 202 WNTLVTGLIRNGETEKAKQVFDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMSE--- 258
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
N +T S+++ G V + + F M P N+
Sbjct: 259 -KNVVTWTSMVYGYCRYGDVHEAYRLFCEM-PERNV 292
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
S L + L KI + G V T+L YAK+G ++ +R +F+ MP++N ++
Sbjct: 84 SEGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNA 143
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M+ G + E+ LF EM K N ++ +L A G D ++ F+ M P
Sbjct: 144 MLTGYVKCRRLNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSDDAVELFDEM-PER 197
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
N+ + +V L R+G +A+ ++MP D+ +W +++ G
Sbjct: 198 NVVS----WNTLVTGLIRNGETEKAKQVFDAMP-SRDAVSWNAMIKG 239
>gi|297741541|emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 182/500 (36%), Positives = 278/500 (55%), Gaps = 26/500 (5%)
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI-----EMGD 265
FK E H CN L R+ R + T IL+ I
Sbjct: 296 FKPQRETHALACNQL--------------KESQRIHGRAIKLGTTILEPDIVCSYSASKA 341
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L +A ++FDE+P + VS + I + + + EEA F +M + KPN F V+ +
Sbjct: 342 LWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPS 401
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+L+ L SG +HA +K+G+E +VF+ +A++D Y+K + + F+ E +V
Sbjct: 402 STALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNV--- 458
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ ++I GY + ++A LF MP+RN VSW+A+ISGY + + +F ML
Sbjct: 459 VSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLRE 518
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G +PN+ TF + A A++A+L G+ HG +K +DVF+G +L YAK G +E S
Sbjct: 519 GTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEES 578
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF+ +P KN +SW ++ G A G E+I FE+M+ T + PN +T+L +L AC+HS
Sbjct: 579 LLVFNTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHS 638
Query: 566 GLVDKGLKYFNS--MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
GLVDKG YFN +E + P H+ C+VD+LSRSGR EAE F++ +PF P W
Sbjct: 639 GLVDKGYSYFNKARVEEPGLLTP--EHHACMVDLLSRSGRFKEAEKFLHELPFVPGIGFW 696
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL GC+ + N ++ E A + + L E + YV+LSN +++AGRW +RK M EK
Sbjct: 697 KALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVSMIRKEMREK 756
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
++ G SW+E+R++VH F
Sbjct: 757 RMKGVPGSSWIEIRSKVHIF 776
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 151/271 (55%), Gaps = 3/271 (1%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +V+S TA I F + EA+ F ++L +KPN+ +F ++ + + D
Sbjct: 349 FDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSSTALQDL 408
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + K G E +V V ++++ K+ ++ A+ F+ + +VVS+T ++ +
Sbjct: 409 NSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGY 468
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
++ +A +F +MPERN VSW+ MI+ Y+Q GY EEA LF M R PN F
Sbjct: 469 LKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTFP 528
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+SA+A++ AL G H +K + DVFI N+L+ Y+KCG ++ LVF+++ +K
Sbjct: 529 CAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKK 588
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ +VSWN++I GY +G+ EA F+ M
Sbjct: 589 N---IVSWNALICGYANHGRGMEAIYFFEKM 616
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 5/244 (2%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
L S + L A I L ++ V + +++ + ++ EAQ+ F+ E N VS+T LI
Sbjct: 408 LNSGRQLHACAIKMGLES-NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIR 466
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G++K R ++++ F + P +NV+SW A I G+ Q G++ EA+ LF+ +L G PNE T
Sbjct: 467 GYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERT 526
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F A A I +G S G K + V + NSL++ K G ++ + VF+ +
Sbjct: 527 FPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLP 586
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFR 302
K+++VSW ++ + G EA F++M + N V+ ++ N SG ++ +
Sbjct: 587 KKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHSGLVDKGYS 646
Query: 303 LFRQ 306
F +
Sbjct: 647 YFNK 650
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 185/594 (31%), Positives = 310/594 (52%), Gaps = 79/594 (13%)
Query: 120 SWTALISGFMKHGRVEESMWYFERNPF--QNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
S T+LI+ + K G++ E++ F +P +NV ++ A I GFV NG + + + + K+
Sbjct: 48 SITSLINMYSKCGQMGEAILVF-YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRL 106
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
GV P++ TF + + C E+ + + + G + K G E V V ++L+ LK G ++
Sbjct: 107 EGVMPDKYTFPCVVRTCCEVMEVK---KIHGCLLKMGLELDVFVGSALVNTYLKNGSME- 162
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
+A+++F E+ R+ V W+ MI Y + G
Sbjct: 163 ------------------------------DAQKVFGELSIRDVVLWNAMINGYAKIGCL 192
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+EA +FR+M P+ + +LS AS L +G VH V+K+G + V +SNAL
Sbjct: 193 DEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNAL 252
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
ID+Y KC D ++F+ I E K++F
Sbjct: 253 IDMYGKCKHIGDALIIFEMINE-------------------------KDIF--------- 278
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
SW++IIS + + D +F++ML SG +P+ T ++VL A + +A+L G+++HG +
Sbjct: 279 SWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYM 338
Query: 478 IKLGFPYD--------VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
I G D + + A+ D YAK G + ++ ++FD M K+ SW +M+ G
Sbjct: 339 IINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGM 398
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
GYA E++ +F +M + PNE+T++ VL AC+H+G V G + ME + + P
Sbjct: 399 HGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIE 458
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
HYTCV+DML R+G L +A + + MP + + W +LL C+ + N ++AE A + + +L
Sbjct: 459 HYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQL 518
Query: 650 AEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
EH YVL+SN+Y GR+ + + VRK M E+ ++K+ GCSW+E+++ VH F
Sbjct: 519 EPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVF 572
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 215/487 (44%), Gaps = 92/487 (18%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D+ V + ++N ++ G++E+AQ++F + R+ V W A+I+G+ K G ++
Sbjct: 143 LDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLD--------- 193
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
EAL++F ++ GV P+ T + I A D G
Sbjct: 194 ----------------------EALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGK 231
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+V G++ K G++ VSV N+LI + K + A +F+ + ++D+ SW I+ V + G
Sbjct: 232 TVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCG 291
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
D + RLF +M P+ + VL
Sbjct: 292 D-------------------------------HDGTLRLFDKMLGSGILPDLVTITTVLP 320
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKD--------VFISNALIDLYSKCGETKDGRLVFDS 376
A + L AL G +H +++ G+ KD + +SNA++D+Y+KCG + +FDS
Sbjct: 321 ACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDS 380
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIIS-----GYL 427
+ +KDVA SWN MI GYG++G EA +F M K N+V+ ++S G++
Sbjct: 381 MSKKDVA---SWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFV 437
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP--YD 485
H + L A G IP ++ V+ LE ++ K+ P +
Sbjct: 438 SHGR--LFLAQMESTF--GVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWR 493
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
LG A+ +I ++R+V P+ S+ +M G +E + + + M++
Sbjct: 494 ALLGACRLHGNAELAEI-AARQVLQLEPEHCG-SYVLMSNVYGVIGRYEEVLEVRKTMKE 551
Query: 546 TSI--TP 550
++ TP
Sbjct: 552 QNVKKTP 558
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 39/313 (12%)
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
T C + L + A + L G +H+ ++ G +LI++YSKCG+ + LVF
Sbjct: 12 TKCVAF-LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF- 69
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+D +RN +++AIISG++ +
Sbjct: 70 --------------------------------YDPCHERNVFAYNAIISGFVSNGLASKG 97
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F + +M L G +P+K TF V+ V ++K +HG ++K+G DVF+G+AL +T
Sbjct: 98 FQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKK---IHGCLLKMGLELDVFVGSALVNT 154
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K+G +E +++VF + ++ + W M+ G A+ G E++ +F M + P+ TI
Sbjct: 155 YLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTI 214
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+L + G +D G K + + ++DM + + +A I M
Sbjct: 215 TGILSVFASRGDLDNG-KTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDAL-IIFEMI 272
Query: 616 FEPDSNAWASLLS 628
E D +W S++S
Sbjct: 273 NEKDIFSWNSIIS 285
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 188/431 (43%), Gaps = 55/431 (12%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V++ + +HG L+K G+ + ++ + L+ YL + +A ++ +L+ D+V+ N MIN
Sbjct: 126 VMEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMING 185
Query: 97 NIQWGNLEEAQRLFDGM------PERNEVSW----------------------------- 121
+ G L+EA +F M P R ++
Sbjct: 186 YAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSG 245
Query: 122 ----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
ALI + K + +++ FE +++ SW + I Q G L+LF K+L
Sbjct: 246 VSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 305
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK--------HVSVCNSLITLS 229
SG+ P+ VT +++ AC+ + G + G + G K ++ V N+++ +
Sbjct: 306 SGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMY 365
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWS 285
K G ++ A +FD M K+DV SW +++ + G EA +F +M E NEV+
Sbjct: 366 AKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLV 425
Query: 286 VMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+++ N +G+ QM + + P ++ V+ L L + V K
Sbjct: 426 GVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEI---VQK 482
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+ I+ + + AL+ G + + +++ + H S+ M YG+ G+ EE
Sbjct: 483 MPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEV 542
Query: 405 KELFDNMPKRN 415
E+ M ++N
Sbjct: 543 LEVRKTMKEQN 553
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 122/315 (38%), Gaps = 84/315 (26%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF--DLVVHNCMI 94
++ GR +HG++I G+ K+ D NG +L+V N ++
Sbjct: 328 LMHGREIHGYMIINGLGKD-------------------------DENGAVDNLLVSNAVM 362
Query: 95 NANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
+ + G++ A ++FD M +++ SW +I G+ H
Sbjct: 363 DMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMH----------------------- 399
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
G++ EAL +F ++ E+ KPNEVT + AC G G +F A
Sbjct: 400 --------GYALEALGMFSQMCEAEFKPNEVTLVGVLSACN-----HAGFVSHGRLFLAQ 446
Query: 215 FEKHVSVCNSL------ITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMG--D 265
E V ++ I + + G ++ A + +M + + V W +L G +
Sbjct: 447 MESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAE 506
Query: 266 LGE--ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
L E AR++ PE S+ +M Y G EE + + M + K C
Sbjct: 507 LAEIAARQVLQLEPEHCG-SYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGC----- 560
Query: 324 SALASLKALRSGMHV 338
S L+ G+HV
Sbjct: 561 ----SWIELKDGVHV 571
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
N + + L + A +L KGK LH +I GF T+L + Y+K G + + VF
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 510 -DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
D ++N ++ ++ G +G A + +++M + P++ T V+ C
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTC 123
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/640 (29%), Positives = 313/640 (48%), Gaps = 99/640 (15%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P ++V SWT + G +NGF + + F+++L + P+E S+ +AC ++
Sbjct: 121 FDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSI 180
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G V + GF V SL L ++
Sbjct: 181 VVGEMVHAQVITRGFSSRTFVNTSL-------------------------------LGMY 209
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
++G +G++ ++F+ + RN+VSW+ MI+ + +G EA+ F +M +PN +CF
Sbjct: 210 AKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFI 269
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKD----------------------VFISN--- 355
V A+ L + G +++ +IG++ + VF+SN
Sbjct: 270 SVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSG 329
Query: 356 --------ALIDLYSKCGETKDGRLVFDSIVEKDVA------------------------ 383
A+I ++ G ++ L+F + + ++
Sbjct: 330 CGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQ 389
Query: 384 -HVVSW----------NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
H + W N+++ Y G+++ ++LFD + N +SW+ +++ Y + ++
Sbjct: 390 LHGMIWKSGSIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEW 449
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+ +VF++M G PN+ TFS VL + AS+ SLE G+ +H K GF D + + L
Sbjct: 450 EDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVL 509
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK G + + +VF+ + D + ISWT M+ G A+ G AK+++ LF +ME PN
Sbjct: 510 IDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNS 569
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
T L +LFACSH GLVD+GL+YF+ ME Y + P HY CVVD+L R GRL+EA FI
Sbjct: 570 ATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIM 629
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
MP EPD W++LL C+ + N Q+A+ A + + + A VLLSN Y AG
Sbjct: 630 KMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEG 689
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+NVR +M + +RK G SW+ + ++H F ++P+
Sbjct: 690 GLNVRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQ 729
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 151/635 (23%), Positives = 265/635 (41%), Gaps = 133/635 (20%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY---- 66
+ E + ++ I+ C+ + + ++ G +H +I G ++ T LL MY
Sbjct: 161 VPDEYALSAAIQACIGV-------DSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLG 213
Query: 67 -----------LGSRKSLEANEIVKDL--NGFDLVVHN---------------CMINANI 98
L +R + N ++ NG +N C I+ +
Sbjct: 214 RIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSK 273
Query: 99 QWGNLEEAQR-------LFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN------- 144
G L + ++ F+ + N TALI F K G V ES F N
Sbjct: 274 AIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVN 333
Query: 145 -PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P+ +IS GF +G EA+ LFL++ ++ +K + T+ S + A++
Sbjct: 334 LPWNAMIS------GFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYV 387
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G+I+K+G VS+CN+L+ K GE+D R +FD E+ + +SWT ++ +
Sbjct: 388 KQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAY--- 443
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
+QS E+A +F QM F+PN FS VL
Sbjct: 444 ----------------------------SQSSEWEDALSVFSQMREMGFQPNQVTFSGVL 475
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
++ ASL +L G VH+ K G +D + + LID+Y+KCG +D VF+S+ + D
Sbjct: 476 ASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPD-- 533
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
V+SW +MI GY +G ++A ELF M E++
Sbjct: 534 -VISWTAMISGYAQHGMAKDALELFRKM-----------------------------ELV 563
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L PN +TF +L A + +++G + H + G ++ + D + G +
Sbjct: 564 LPN--PNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRL 621
Query: 503 ESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ + +MP + +E W+ ++ G + + + S P++ L VL +
Sbjct: 622 TEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQ--LAKIAAQKVLSYNPDDFAAL-VLLS 678
Query: 562 CSH--SGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
++ +G ++ GL N M+ K G + C+
Sbjct: 679 NTYREAGNIEGGLNVRNMMKSQAMRKETGMSWICI 713
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 189/449 (42%), Gaps = 77/449 (17%)
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F +EK V ++ + + D G AR++FDE+P+++ SW+V++ ++G+ +
Sbjct: 90 FQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGI 149
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
F ++ P+ S + A + ++ G VHA V+ G F++ +L+ +Y
Sbjct: 150 DYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMY 209
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+K G D VF+S+ ++ VSWN+MI G+ NG EA F M
Sbjct: 210 AKLGRIGDSCKVFNSLENRN---QVSWNAMISGFVSNGLYAEAYNSFLRM---------- 256
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
L EI PN + F SV A + +EKG+ ++ ++
Sbjct: 257 ----------------------LGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEI 294
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVF--DRMPDKNEISWTVMVRGLAESGYAKESIN 538
G ++ +GTAL D +AK G + S VF + + W M+ G SG+ +E++
Sbjct: 295 GMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAML 354
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVD-KGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF M + +I + T S L + + D + L+Y + M
Sbjct: 355 LFLRMCQNNIKRDVYTYCSTL-----NSIADMRSLEYVKQLH----------------GM 393
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
+ +SG + + NA + C E A R + + W+ E + +
Sbjct: 394 IWKSGSIGVSL-----------CNALMDAYAKC----GELDAMRKLFDTWE--ESNQISW 436
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L Y+ + W DA++V M E G +
Sbjct: 437 TTLVTAYSQSSEWEDALSVFSQMREMGFQ 465
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 28/183 (15%)
Query: 461 SASVASLEKGKDLHGKIIKLGF---PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
SA L+K K +HG +IK V L L Y+K D S+R+VFD +P K+
Sbjct: 71 SADERCLKKAKSIHGFVIKFQLIEKSLTVML-NQLVIAYSKCSDFGSARQVFDEIPQKSV 129
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC-----------SHSG 566
SWTV++ G E+G+ ++ I+ F E+ I P+E + + + AC H+
Sbjct: 130 FSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQ 189
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
++ +G S N T ++ M ++ GR+ ++ NS+ + +W ++
Sbjct: 190 VITRGF----SSRTFVN--------TSLLGMYAKLGRIGDSCKVFNSLE-NRNQVSWNAM 236
Query: 627 LSG 629
+SG
Sbjct: 237 ISG 239
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 12/197 (6%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
S+FS E F T +L S + G+ +H KTG +++ + + L+ MY
Sbjct: 454 SVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMY 513
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM----PERNEVSWT 122
+A ++ + L D++ MI+ Q G ++A LF M P N ++
Sbjct: 514 AKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFL 573
Query: 123 ALISGFMKHGRVEESMWYF----ERNPFQNVISWTAAICGFV-QNGFSFEALKLFLKLLE 177
L+ G V+E + YF ER I A + + + G EA K +K+
Sbjct: 574 CLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKM-- 631
Query: 178 SGVKPNEVTFSSICKAC 194
++P+E +S++ AC
Sbjct: 632 -PIEPDEKVWSTLLGAC 647
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 298/548 (54%), Gaps = 40/548 (7%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKAC-AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
L++++ +L G +P+ TF + KA A +G +V + K G E + V +SL+
Sbjct: 3 LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVL 62
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ G+ +AR++ D R GD V W+ +
Sbjct: 63 MYAARGDGAVARTLLDAWPARG--------------GD--------------TPVVWNAL 94
Query: 288 IARYNQSGYPEEAFRL----FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
I+ + +S FRL F M R P + VLSA K + GM VH V+
Sbjct: 95 ISGHRRS----RQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVV 150
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
G+ D+ + NALID+Y++C E +F+ + +V + VSW S+I G+ GQ+++
Sbjct: 151 ASGVLPDLKVGNALIDMYAECSEMDAAWELFEGM---EVRNTVSWTSVISGFLRLGQVDQ 207
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A+ LFD MP+R+ VSW+A+I GY++ QF +F EM S ++ T SV+ A A
Sbjct: 208 ARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQ 267
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
+ +LE G+ + + G D F+G AL D Y+K G I+ + VF M +++ +WT +
Sbjct: 268 LGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAV 327
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ GLA +G+ +E+IN+F M + P+E+T + VL AC+H+GLVDKG +F SM Y
Sbjct: 328 ILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYG 387
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
I PN H+ C++D+L R+G+L EA + I +MP P+S W +LL+ C+ + N +I + A
Sbjct: 388 IAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAA 447
Query: 644 KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
++L +L E+ Y+LLSN+YA + RW D +R+++ EKG++K GCS +E+ +H F
Sbjct: 448 EHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEF 507
Query: 704 FQKTDHNP 711
+P
Sbjct: 508 IAGDRSHP 515
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 210/490 (42%), Gaps = 101/490 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G A+H H++K G+ ++ + L++MY
Sbjct: 38 GDAVHAHVVKFGMELNAHVASSLVLMYAAR------------------------------ 67
Query: 100 WGNLEEAQRLFDGMPER---NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
G+ A+ L D P R V W ALISG H R + + +
Sbjct: 68 -GDGAVARTLLDAWPARGGDTPVVWNALISG---HRRSRQ---------------FRLSC 108
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
C FV ++ +GV P VT+ ++ AC + LG+ V + +G
Sbjct: 109 CSFVD-------------MVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVL 155
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ V N+LI + + E+D A +F+ ME R+ VSWT ++ F+ +G + +AR +FD M
Sbjct: 156 PDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCM 215
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
PER+ VSW+ MI Y Q+G EA +FR+M + + V++A A L AL +G
Sbjct: 216 PERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGE 275
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
++ + GI+ D F+ NAL+D+YSKCG + VF + +D +W ++I G
Sbjct: 276 WARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRD---KFTWTAVILGLA 332
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
+NG EEA +F M + VF E P++ TF
Sbjct: 333 VNGHGEEAINMFYRMLR---------------------VF----------EAPDEVTFIG 361
Query: 457 VLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
VL A ++KG+D + G +V L D ++G ++ + MP +
Sbjct: 362 VLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMR 421
Query: 516 -NEISWTVMV 524
N W ++
Sbjct: 422 PNSAIWGTLL 431
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 157/327 (48%), Gaps = 8/327 (2%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL V N +I+ + ++ A LF+GM RN VSWT++ISGF++ G+V+++ F+ P
Sbjct: 157 DLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMP 216
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++ +SWTA I G+VQ G EAL++F ++ S V+ +E T S+ ACA++ G
Sbjct: 217 ERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEW 276
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + G + V N+L+ + K G + A VF M RD +WT ++ G
Sbjct: 277 ARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGH 336
Query: 266 LGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFS 320
EA +F M +EV++ ++ +G ++ F MT Y PN F
Sbjct: 337 GEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFG 396
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ L L+ + + + + + I L+ G ++ G+L + ++E
Sbjct: 397 CLIDLLGRAGKLKEALET---IGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLEL 453
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D + + + + Y + + E+ + L
Sbjct: 454 DTENGMVYILLSNLYAKSNRWEDVRRL 480
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 210/701 (29%), Positives = 352/701 (50%), Gaps = 105/701 (14%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG---RVEESMWYF 141
F ++ +C+ + + G L A RL + E + V + +LIS + K G + E+
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHA-RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
R ++V+SW+A + + NG +A+K+F++ LE G+ PN+ ++++ +AC+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 202 LGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G G + K G FE V V SLI + +K GE
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GE-------------------------- 216
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
A ++FD+M E N V+W++MI R Q G+P EA R F M F+ + S
Sbjct: 217 ---NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 321 IVLSALASLK-----------ALRSG-------------------------------MHV 338
V SA A L+ A+RSG M
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 339 HA----HVLKIGIEKDVFISNALIDLYSK--------------------CGETKD---GR 371
H+ L G K+ ++ I+L+S+ CG D G+
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 372 LVFDSIVEKDVAHVVS-WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
V ++ +A S NS+I + + +ME+A+ F+++ ++N VS++ + G +
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
F+ F + +E+ + TF+S+L A+V S+ KG+ +H +++KLG + +
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL Y+K G I+++ RVF+ M ++N ISWT M+ G A+ G+A + F +M + + P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
NE+T +++L ACSH GLV +G ++FNSM + IKP HY C+VD+L R+G L++A +F
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
IN+MPF+ D W + L C+ + N ++ + A + + +L PA Y+ LSNIYA AG+W
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++ +R+ M E+ L K GGCSW+EV +++H F+ +P
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHP 734
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 204/474 (43%), Gaps = 79/474 (16%)
Query: 175 LLESGVKP-NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
+ G++P + VTFSS+ K+C DFRLG V + + E + NSLI+L K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 234 EVDLARSVFDRME---KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ A VF+ M KRDVVSW S M+A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSW-------------------------------SAMMAC 140
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEK 349
Y +G +A ++F + PN C++ V+ A ++ + G ++K G E
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
DV + +LID++ K GE E A ++FD
Sbjct: 201 DVCVGCSLIDMFVK-GEN--------------------------------SFENAYKVFD 227
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M + N V+W+ +I+ ++ F +M+LSG +K T SSV A A + +L
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAK---SGDIESSRRVFDRMPDKNEISWTVMVRG 526
GK LH I+ G DV +L D YAK G ++ R+VFDRM D + +SWT ++ G
Sbjct: 288 GKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 527 -LAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
+ A E+INLF EM + + PN T S AC + G + +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK-RGL 404
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTYKNEQ 637
N V+ M +S R+ +A+ S+ E + ++ + L G C+ EQ
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNLNFEQ 457
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 297/576 (51%), Gaps = 60/576 (10%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV--TFSSICKACAEINDFR 201
P+ +SW I G +A+ LFL++ + V + + K+CA +
Sbjct: 9 TPWPPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSA 68
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
LG S+ L ++G N+L+ L K+ + V S
Sbjct: 69 LGASLHALAIRSGAFADRFTANALLNLYCKLP--------CSYLHSTGVTS--------- 111
Query: 262 EMGDLGEA------RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+G G + R++FDEM ER+ VSW+ ++ + G EA L R+M R F+P+
Sbjct: 112 -VGGTGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPD 170
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ S VL A ++ G VH ++ G + DVF+ ++LID+Y+ C T
Sbjct: 171 SFTLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRT-------- 222
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ + ++FDN+P R+ + W+++++G ++ +
Sbjct: 223 --------------------------DYSVKVFDNLPVRDPILWNSVLAGCAQNGSVEEA 256
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F ML +G P TFSS++ ++ASL GK LH +I+ GF +VF+ ++L D
Sbjct: 257 LGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDM 316
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G+I + +FDRM + +SWT M+ G A G A+E++ LFE ME + PN +T
Sbjct: 317 YCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 376
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
L+VL ACSH+GLVDKG KYF SM Y I P H + D+L R+G L EA +FI+ M
Sbjct: 377 LAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQ 436
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
+P ++ W++LL C+ +KN +AE K + +L +V+LSN+Y+++GRW +A +
Sbjct: 437 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 496
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+RK M +KG++K CSW+EV+N++H F +P
Sbjct: 497 LRKSMRKKGMKKDPACSWIEVKNKLHVFVAHDRSHP 532
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 214/541 (39%), Gaps = 115/541 (21%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
LK + L G +LH I++G +R+ LL +Y S + V + G
Sbjct: 58 LKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTG- 116
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
LE +++FD M ER+ VSW L+ G + GR
Sbjct: 117 -----------SSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGR-------------- 151
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
EAL L K+ G +P+ T SS+ AE D + G V
Sbjct: 152 -----------------HHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVH 194
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + GF+ V V +SLI + D + VFD + RD + W +L
Sbjct: 195 GFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVL---------- 244
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
A Q+G EEA +FR+M + +P FS ++
Sbjct: 245 ---------------------AGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCG 283
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+L +LR G +HA+V++ G E +VFIS++LID+Y KCGE +FD + D VVS
Sbjct: 284 NLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPD---VVS 340
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
W +MI GY L+G EA LF+ M L
Sbjct: 341 WTAMIMGYALHGPAREALVLFERME-------------------------------LGNA 369
Query: 448 IPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN TF +VL A + ++KG K G + AL D ++G+++ +
Sbjct: 370 KPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAY 429
Query: 507 RVFDRMPDKNEIS-WTVMVRGL---AESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+M K S W+ ++R + A+E E+E SI + +LS +++
Sbjct: 430 NFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSH--VVLSNMYSA 487
Query: 563 S 563
S
Sbjct: 488 S 488
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 139/327 (42%), Gaps = 46/327 (14%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V +G +HG ++ G + ++ + L+ MY ++ + ++ +L D ++ N ++
Sbjct: 187 VKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAG 246
Query: 97 NIQWGNLEEAQRLFDGM----------------P-----------------------ERN 117
Q G++EEA +F M P E N
Sbjct: 247 CAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDN 306
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
++LI + K G + + F+R +V+SWTA I G+ +G + EAL LF ++
Sbjct: 307 VFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMEL 366
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
KPN +TF ++ AC+ G F + G + C +L + + GE+D
Sbjct: 367 GNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELD 426
Query: 237 LARSVFDRMEKRDVVS-WTVILDVFIEMGD--LGE--ARRIFDEMPERNEVSWSVMIARY 291
A + +M+ + S W+ +L + L E A++I E+ R+ S V+ Y
Sbjct: 427 EAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIM-ELEPRSIGSHVVLSNMY 485
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ SG EA L + M + K + +C
Sbjct: 486 SASGRWNEAAHLRKSMRKKGMKKDPAC 512
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 296/592 (50%), Gaps = 68/592 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG--V 180
A++ + K G + E+ F +N +NV+SW I F G EA L ++ G +
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K NEVT ++ AC + R + G F+ F+ HV + N+ I
Sbjct: 348 KANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFIL------------- 393
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+ + G L A ++F + ++ SW+ +I + Q+G P +A
Sbjct: 394 ------------------AYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKA 435
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
L QMT +P+ S +L A A LK+L+ G +H +VL+ G+E D F+ +L+
Sbjct: 436 LHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSH 495
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y CG+ R+ LFD M +N VSW+
Sbjct: 496 YIHCGKASSARV----------------------------------LFDRMKDKNLVSWN 521
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+ISGY ++ A+F + L G ++ SV A + +++L GK+ HG ++K
Sbjct: 522 AMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKA 581
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D F+G ++ D YAKSG I+ SR+VFD + DKN SW ++ G+ KE+I L+
Sbjct: 582 LQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELY 641
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
E M+K P+ T + +L AC H+GLV++GLKYF M+ I+P HY C++DML+R
Sbjct: 642 ERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLAR 701
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+GRL +A +N MP E D+ W+SLL C+T+ +I E+ K L +L + YVLL
Sbjct: 702 AGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLL 761
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SN+YA G+W VR++M E GL+K GCSW+EV +V+ F PK
Sbjct: 762 SNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPK 813
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 169/644 (26%), Positives = 287/644 (44%), Gaps = 110/644 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERY-LTTRLLIMYLGSRKSLEANEIVKDLNGF 85
LL+ +Q + GR LH + + ++ Y L TRL+ MY L++ + ++
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 86 DLVVHNCMINANIQWGNLEEAQRLF-------DGMPER------------------NEV- 119
+L+ N +++ + G + ++F D P+ EV
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 120 --------------SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
AL+ + K G V+E+M F+ P N++SW + IC F +NGFS
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228
Query: 166 FEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
++ L +++L E G+ P+ VT +I CA + +G+ + GL K G + V V N+
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
++ + K G ++ A+ F + ++VVSW ++ F GD+ EA + EM
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEM-------- 340
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
Q+ K N VL A LRS +H + +
Sbjct: 341 ---------------------QIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFR 379
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+ V +SNA I Y+KCG VF I +K V+ SWN++IGG+ NG
Sbjct: 380 HCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVS---SWNALIGGHAQNGD---- 431
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
P+ K L+F +M SG+ P+ T SS+L A A +
Sbjct: 432 -------PR----------------KALHLLF----QMTYSGQQPDWFTISSLLLACAHL 464
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
SL+ GK++HG +++ G D F+GT+L Y G S+R +FDRM DKN +SW M+
Sbjct: 465 KSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMI 524
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G +++G ES+ LF + I +E+ I+SV ACS + G + + + +
Sbjct: 525 SGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYV--LKAL 582
Query: 585 KPNGRHYTC-VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ C ++DM ++SG + E+ + + + + +W +++
Sbjct: 583 QTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAII 625
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 240/520 (46%), Gaps = 90/520 (17%)
Query: 58 LTTRLLIMYLGSRK----SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF--- 110
LTT L+++ S+ SL+A E + L++ C +I+ G +RL
Sbjct: 21 LTTALILIQSHSQNAAFISLQAKEAI------GLLLQACGNQKDIETG-----RRLHKFV 69
Query: 111 -DGMPERNE-VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
D RN+ V T LI + G +S F+ +N+I W A + G+ +NG +
Sbjct: 70 SDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDV 129
Query: 169 LKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
+K+F+ L+ ++ +P+ TF S+ KAC I D RLG + G++ K G V V N+L+
Sbjct: 130 VKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVG 189
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K G VD A VFD M + ++VS W+ M
Sbjct: 190 MYGKCGAVDEAMKVFDFMPETNLVS-------------------------------WNSM 218
Query: 288 IARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
I ++++G+ ++F L +M P+ +L A + GM +H +K+G
Sbjct: 219 ICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLG 278
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ ++V ++NA++ +YSKCG + ++ F V+ + +VVSWN+MI + L G + EA
Sbjct: 279 LSEEVMVNNAMVYMYSKCGYLNEAQMSF---VKNNNKNVVSWNTMISAFSLEGDVNEA-- 333
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE--IPNKSTFSSVLCASASV 464
F + EM + GE N+ T +VL A
Sbjct: 334 -----------------------------FNLLQEMQIQGEEMKANEVTILNVLPACLDK 364
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
L K+LHG + F + V L A YAK G + S+ +VF + DK SW ++
Sbjct: 365 LQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALI 423
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
G A++G +++++L +M + P+ TI S+L AC+H
Sbjct: 424 GGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/548 (25%), Positives = 229/548 (41%), Gaps = 109/548 (19%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
+ T + +L + V G +HG +K G+ +E + ++ MY EA
Sbjct: 248 VVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFV 307
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP------ERNEVSW------------- 121
N ++V N MI+A G++ EA L M + NEV+
Sbjct: 308 KNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQL 367
Query: 122 ---------------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
A I + K G + + F + V SW A I G
Sbjct: 368 RSLKELHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHA 427
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
QNG +AL L ++ SG +P+ T SS+ ACA + + G + G + + G E
Sbjct: 428 QNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFF 487
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V SL++ + G+ AR +FDRM+ +++V
Sbjct: 488 VGTSLLSHYIHCGKASSARVLFDRMKDKNLV----------------------------- 518
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
SW+ MI+ Y+Q+G P E+ LFR+ + + V A + L ALR G H
Sbjct: 519 --SWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHG 576
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+VLK +D F+ ++ID+Y+K G K+ R VFD + +K+VA SWN++I +G++G
Sbjct: 577 YVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVA---SWNAIIVAHGIHGH 633
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+EA EL++ M K G++P++ T+ +L A
Sbjct: 634 GKEAIELYERMKK-------------------------------VGQMPDRFTYIGILMA 662
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTA-LTDTYAKSGDIESSRRVFDRMPDK--NE 517
+E+G ++ A L D A++G ++ + R+ + MP++ N
Sbjct: 663 CGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNR 722
Query: 518 ISWTVMVR 525
I W+ ++R
Sbjct: 723 I-WSSLLR 729
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 171/368 (46%), Gaps = 50/368 (13%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVL-KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
++L A + K + +G +H V D ++ LI +Y+ CG D RLVF
Sbjct: 46 IGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVF--- 102
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
DNM +N + W+A++SGY + + V
Sbjct: 103 -------------------------------DNMETKNLIQWNALVSGYTRNGLYGDVVK 131
Query: 438 VFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
VF +++ + P+ TF SV+ A + + G+ +HG +IK+G DVF+G AL Y
Sbjct: 132 VFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMY 191
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTI 555
K G ++ + +VFD MP+ N +SW M+ +E+G++++S +L EM + + P+ +T+
Sbjct: 192 GKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTV 251
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+++L C+ G VD G+ + + + +V M S+ G L+EA+ M
Sbjct: 252 VTILPVCAGEGEVDIGMG-IHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQ-----MS 305
Query: 616 FEPDSN----AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
F ++N +W +++S + A ++ + EE A V + N+ + +
Sbjct: 306 FVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC---L 362
Query: 672 DAMNVRKL 679
D + +R L
Sbjct: 363 DKLQLRSL 370
>gi|357117671|ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Brachypodium distachyon]
Length = 602
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 311/585 (53%), Gaps = 72/585 (12%)
Query: 123 ALISGFMKHGR-VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES--G 179
AL++ +++ R + ++ F+ P ++V++ ++ + F++ G AL+ +L G
Sbjct: 75 ALLAFYVRLPRHLPYALRAFDDLPHRDVVAHSSILAAFLRAGLPRRALQSLRSMLAGADG 134
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V PN S+ KACA + D +G V G+I G+
Sbjct: 135 VFPNAHALSAAVKACAVLRDRNVGACVHGVILVRGYAD---------------------- 172
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
D + + ++D++ G+AR+ F+EM + + ++ +I+ + ++ + EE
Sbjct: 173 ---------DDIVLSALVDMYGHTASPGDARKAFEEMCTPDGICYTSLISAFVRNDWFEE 223
Query: 300 AFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A R FR M TR +P+ F +++AL +L+ R G HA V+ G+ V + ++ +
Sbjct: 224 AVRWFRTMVTRNGVEPDGCTFGSMMTALGNLRRARQGSEAHAQVVTRGLCGSVIVESSTL 283
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+Y+KCG M EA+ +FD M RN VS
Sbjct: 284 DMYAKCG----------------------------------MMLEARRVFDEMQVRNAVS 309
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
WSA++ GY ++ +++ V +F +M E + + +VL A A ++S++ GK++H + +
Sbjct: 310 WSALLGGYCQNAEYEKVLVLFRQM--DKEYDDSYSLGTVLRACAGLSSVKPGKEIHCRFL 367
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ G DV + +AL D YAK G ++ + RVF+ +N I+W M+ G A++G+A+ +IN
Sbjct: 368 RNGGWRDVVVESALVDLYAKCGAVDYACRVFEASSVRNTITWNAMIGGFAQNGHAERAIN 427
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LF +M + P+ ++ + VLFACSH+G+V++G YFNSM Y I P HY C+VD+L
Sbjct: 428 LFNQMVREGARPDYISFIGVLFACSHNGMVEQGRNYFNSMSKDYGIAPGIEHYNCIVDLL 487
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
SR L EAED IN PF DS+ WA++L T N +AER K + +L ++ Y+
Sbjct: 488 SRVELLEEAEDLINKSPFSNDSSLWAAILGASATQSNPDVAERVAKKMMELEPQYHLSYI 547
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEV-RNQVHF 702
LL N+Y + GRW DA +R+LM + ++K G SW++V RN++H
Sbjct: 548 LLENVYRTVGRWEDASEIRRLMKSRKVKKDPGMSWIDVNRNKIHM 592
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 171/446 (38%), Gaps = 109/446 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +HG ++ G + + + L+ MY + +A + +++ D + + +I+A ++
Sbjct: 158 GACVHGVILVRGYADDDIVLSALVDMYGHTASPGDARKAFEEMCTPDGICYTSLISAFVR 217
Query: 100 WGNLEEAQRLFDGMPERNEVS---------WTAL-------------------------- 124
EEA R F M RN V TAL
Sbjct: 218 NDWFEEAVRWFRTMVTRNGVEPDGCTFGSMMTALGNLRRARQGSEAHAQVVTRGLCGSVI 277
Query: 125 -----ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+ + K G + E+ F+ +N +SW+A + G+ QN + L LF ++ +
Sbjct: 278 VESSTLDMYAKCGMMLEARRVFDEMQVRNAVSWSALLGGYCQNAEYEKVLVLFRQMDKE- 336
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ + ++ +ACA ++ + G + + G
Sbjct: 337 -YDDSYSLGTVLRACAGLSSVKPGKEIHCRFLRNG------------------------- 370
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
RDVV + ++D++ + G + A R+F+ RN ++W+ MI + Q+G+ E
Sbjct: 371 ------GWRDVVVESALVDLYAKCGAVDYACRVFEASSVRNTITWNAMIGGFAQNGHAER 424
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALI 358
A LF QM R +P+ F VL A + + G + + K GI + N ++
Sbjct: 425 AINLFNQMVREGARPDYISFIGVLFACSHNGMVEQGRNYFNSMSKDYGIAPGIEHYNCIV 484
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
DL S+ VE +EEA++L + P ND S
Sbjct: 485 DLLSR--------------VE--------------------LLEEAEDLINKSPFSNDSS 510
Query: 419 -WSAIISGYLEHKQFDLVFAVFNEML 443
W+AI+ D+ V +M+
Sbjct: 511 LWAAILGASATQSNPDVAERVAKKMM 536
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
R+ V +AL+ + K G V+ + FE + +N I+W A I GF QNG + A+ LF ++
Sbjct: 373 RDVVVESALVDLYAKCGAVDYACRVFEASSVRNTITWNAMIGGFAQNGHAERAINLFNQM 432
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGE 234
+ G +P+ ++F + AC+ G + F + K G + N ++ L +
Sbjct: 433 VREGARPDYISFIGVLFACSHNGMVEQGRNYFNSMSKDYGIAPGIEHYNCIVDL---LSR 489
Query: 235 VDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLGEARRIFDEMPE---RNEVSWSVM 287
V+L D + K D W IL + A R+ +M E + +S+ ++
Sbjct: 490 VELLEEAEDLINKSPFSNDSSLWAAILGASATQSNPDVAERVAKKMMELEPQYHLSYILL 549
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFK 313
Y G E+A + R M K
Sbjct: 550 ENVYRTVGRWEDASEIRRLMKSRKVK 575
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 197/622 (31%), Positives = 324/622 (52%), Gaps = 49/622 (7%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N ++ ++ N++ A++LFD +P+RN +WT LISGF + G E
Sbjct: 328 NYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSE--------------- 372
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
KLF ++ G PN+ T SS+ K C+ + +LG V +
Sbjct: 373 ----------------VVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWM 416
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ G + V + NS++ L LK + A VF+ M + DVVSW +++ ++ GD+ ++
Sbjct: 417 LRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSL 476
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+F +P ++ VSW+ ++ Q GY +A M + + FSI L +SL
Sbjct: 477 DMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLS 536
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+ G +H VLK G +D FI ++L+++Y KCG + SIV KDV N
Sbjct: 537 LVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNA-----SIVLKDVPLDFLKN- 590
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
G G+ KEL K VSW ++SGY+ + +++ F M+ + +
Sbjct: 591 --GNAGVT-----CKEL-----KAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVD 638
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
T ++++ A A+ LE G+ +H K+G D ++G++L D Y+KSG ++ + +F
Sbjct: 639 IRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFR 698
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+ + N + WT M+ G A G K++I LFEEM I PNE+T L VL AC H+GL+++
Sbjct: 699 QTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEE 758
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G +YF M+ Y I P H T +VD+ R+G L+E ++FI ++ W S LS C
Sbjct: 759 GCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSC 818
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
+ +KN ++ + + L ++A P YVLLSN+ AS RW +A VR LM ++G++K G
Sbjct: 819 RLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPG 878
Query: 691 CSWVEVRNQVHFFFQKTDHNPK 712
SW+++++Q+H F +P+
Sbjct: 879 QSWIQLKDQIHTFIMGDRSHPQ 900
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 207/423 (48%), Gaps = 52/423 (12%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V+ N +++ ++ E A+R+F+ M E + VSW +IS +++ G VE+S+ F R P
Sbjct: 424 DVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLP 483
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+++V+SW + G +Q G+ +AL+ ++E G + + VTFS + ++ LG
Sbjct: 484 YKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQ 543
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G++ K GF + + +SL+ + K G RM+ +V V LD F++ G+
Sbjct: 544 LHGMVLKFGFCRDGFIRSSLVEMYCKCG----------RMDNASIVLKDVPLD-FLKNGN 592
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
G + + VSW +M++ Y +G E+ + FR M R + + ++SA
Sbjct: 593 AGVTCKEL----KAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISA 648
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+ L G HVHA+ KIG D ++ ++LID+YSK G D +F E + +
Sbjct: 649 CANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPN---I 705
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V W SMI G L+GQ ++A +F EML
Sbjct: 706 VFWTSMISGCALHGQGKQA-------------------------------ICLFEEMLNQ 734
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD--VFLGTALTDTYAKSGDIE 503
G IPN+ TF VL A LE+G + +++K + + V T++ D Y ++G +
Sbjct: 735 GIIPNEVTFLGVLNACCHAGLLEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLT 793
Query: 504 SSR 506
++
Sbjct: 794 ETK 796
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 216/451 (47%), Gaps = 52/451 (11%)
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++ L K G + ++ N L+TL +K +D AR +FD + +R+ +WT
Sbjct: 310 TLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWT---------- 359
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
++I+ ++++G E F+LFR+M PN S +
Sbjct: 360 ---------------------ILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFK 398
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ L+ G VHA +L+ GI+ DV + N+++DLY KC + VF+ + E D
Sbjct: 399 CCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGD--- 455
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VVSWN MI Y G +E++ ++F +P ++ VSW+ I+ G ++ M+
Sbjct: 456 VVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVE 515
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G + TFS L S+S++ +E G+ LHG ++K GF D F+ ++L + Y K G +++
Sbjct: 516 CGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDN 575
Query: 505 SRRVFDRMP----------------DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+ V +P +SW +MV G +G ++ + F M + +
Sbjct: 576 ASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELV 635
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+ T+ +++ AC+++G+++ G ++ ++ + + + ++DM S+SG L +A
Sbjct: 636 VVDIRTVTTIISACANAGILEFG-RHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAW 694
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
EP+ W S++SGC + + A
Sbjct: 695 TIFRQTN-EPNIVFWTSMISGCALHGQGKQA 724
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
LH +K G + L Y KS +++ +R++FD +P +N +WT+++ G + +G
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGLVDKGL--------- 572
++ LF EM PN+ T+ S+ CS H+ ++ G+
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430
Query: 573 --------KYFNSMEPIYNIKPNGR--HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
K F E ++ + G + ++ R+G + ++ D +P++ D +
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYK-DVVS 489
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAE 651
W +++ G + E+ +A++ L+ + E
Sbjct: 490 WNTIVDGLMQFGYER---QALEQLYCMVE 515
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 307/590 (52%), Gaps = 65/590 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+L+ +++ GR+ E+ F+ ++V +W A + G +N + EA+ LF +++ GV
Sbjct: 108 SLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAG 167
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ VT SS+ C + D L L + K G +K + VCN+LI + K+G ++ A+ VF
Sbjct: 168 DTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVF 227
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
ME RD+V+W I I+ Q G A +
Sbjct: 228 HGMECRDLVTWNSI-------------------------------ISGCEQRGQTAAALK 256
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE-KDVFISNALIDLY 361
+F+ M P+ + SA+A RS +H +V++ G + D+ NA++D+Y
Sbjct: 257 MFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMY 316
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+K + + +FDS+ +D VSWN++I GY NG EA E + +M K
Sbjct: 317 AKLSNIEAAQRMFDSMPVQD---SVSWNTLITGYMQNGLANEAVERYGHMQK-------- 365
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
H+ + + TF SVL A + + +L++G +H IK+G
Sbjct: 366 -------HEGLKAI---------------QGTFVSVLPAYSHLGALQQGMRMHALSIKIG 403
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DV++GT L D YAK G + + +F++MP ++ W ++ GL G+ E++ LF
Sbjct: 404 LNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFS 463
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M++ I P+ +T +S+L ACSH+GLVD+G +F+ M+ Y+I P +HY C+ DML R+
Sbjct: 464 RMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRA 523
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G+L EA +FI +MP +PDS W +LL C+ + N ++ + A +NL++L E+ YVL+S
Sbjct: 524 GQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMS 583
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
N+YA G+W VR L+ + L+K+ G S +EV+ V+ F+ P
Sbjct: 584 NMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEP 633
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 129/551 (23%), Positives = 225/551 (40%), Gaps = 117/551 (21%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI + K G +EE+ F +++++W + I G Q G + ALK+F + SGV P
Sbjct: 209 ALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSP 268
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE-KHVSVCNSLITLSLKMGEVDLARSV 241
+ +T S+ A A+ D R S+ + + G++ + N+++ + K+ ++ A+ +
Sbjct: 269 DVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRM 328
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M +D VSW + +I Y Q+G EA
Sbjct: 329 FDSMPVQDSVSW-------------------------------NTLITGYMQNGLANEAV 357
Query: 302 RLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+ M ++ K F VL A + L AL+ GM +HA +KIG+ DV++ LIDL
Sbjct: 358 ERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDL 417
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG+ + L+F+ + + WN++I G G++G EA LF M +
Sbjct: 418 YAKCGKLAEAMLLFEKMPRRSTG---PWNAIISGLGVHGHGAEALTLFSRMQQE------ 468
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
G P+ TF S+L A + +++G+
Sbjct: 469 -------------------------GIKPDHVTFVSLLAACSHAGLVDQGRSF------- 496
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
+DV T +D +P + M L +G E+ N
Sbjct: 497 ---FDVMQVT------------------YDIVPIAKH--YACMADMLGRAGQLDEAFNFI 533
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP-NGRHYTCVVDMLS 599
+ M I P+ ++L AC G V+ G + + ++ + P N +Y + +M +
Sbjct: 534 QNM---PIKPDSAVWGALLGACRIHGNVEMGKV---ASQNLFELDPENVGYYVLMSNMYA 587
Query: 600 RSGR---LSEAEDFINSMPFEPDSNAWASL---------LSGCKTYKNEQIAERAVKNLW 647
+ G+ + E + + + W+S+ SG +T + Q E +
Sbjct: 588 KVGKWDGVDEVRSLVRRQNLQ-KTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRS 646
Query: 648 KLAEEHPAGYV 658
LA+ GYV
Sbjct: 647 LLAKIRSVGYV 657
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 166/365 (45%), Gaps = 48/365 (13%)
Query: 285 SVMIARYNQSGYPEEAFRLFRQM--TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+ +IA ++++ P AF L R + Y F+P+ F ++ A S S +HA
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNA---SAAQLHACA 93
Query: 343 LKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
L++G + VF S +L+ Y L F G++
Sbjct: 94 LRLGLVRPSVFTSGSLVHAY----------LRF------------------------GRI 119
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EA ++FD M +R+ +W+A++SG + + +F M+ G + T SSVL
Sbjct: 120 SEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMC 179
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+ +H +K G ++F+ AL D Y K G +E ++ VF M ++ ++W
Sbjct: 180 VLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWN 239
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS--GLVDKGLKYFNSME 579
++ G + G ++ +F+ M + ++P+ LT++S+ A + G K L + M
Sbjct: 240 SIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCY-VMR 298
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
+++ + +VDM ++ + A+ +SMP + DS +W +L++G Y +A
Sbjct: 299 RGWDVD-DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQ-DSVSWNTLITG---YMQNGLA 353
Query: 640 ERAVK 644
AV+
Sbjct: 354 NEAVE 358
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 150/363 (41%), Gaps = 43/363 (11%)
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
S KSL + + + D++ N +++ + N+E AQR+FD MP ++ VSW LI+G+
Sbjct: 288 SAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGY 347
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTF 187
M QNG + EA++ + + + G+K + TF
Sbjct: 348 M-------------------------------QNGLANEAVERYGHMQKHEGLKAIQGTF 376
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
S+ A + + + G+ + L K G V V LI L K G++ A +F++M +
Sbjct: 377 VSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPR 436
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRL 303
R W I+ G EA +F M + + V++ ++A + +G ++
Sbjct: 437 RSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSF 496
Query: 304 FRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F M Y P ++ + L L + + + I+ D + AL+
Sbjct: 497 FDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNF---IQNMPIKPDSAVWGALLGACR 553
Query: 363 KCGETKDGRLVFDSIVEKD---VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
G + G++ ++ E D V + V ++M G ++E + L + W
Sbjct: 554 IHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGW 613
Query: 420 SAI 422
S+I
Sbjct: 614 SSI 616
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 300/554 (54%), Gaps = 73/554 (13%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W + I G+ + EAL ++ ++ + G P+ TF + KAC+ +N + LG V I
Sbjct: 73 WNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIV 132
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K GFE DV + T +L ++ GD+ A +
Sbjct: 133 KTGFEV-------------------------------DVYAATALLQMYAACGDMEAALK 161
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FD++P+ N V+W+ +IA + P EA R+++ M +S PN VL A A +
Sbjct: 162 VFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRD 221
Query: 332 LRSGMHVHAHVLKIGIEK-------DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
L +G VH ++G++ +V ++ A++D+Y+KCG K
Sbjct: 222 LNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCGSLK---------------- 265
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
A++LF+ MP RN V+W+++I Y ++ Q + +F++M +
Sbjct: 266 ------------------TARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRI 307
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+G P+K+TF V+ A A + +L G+ LH + K D +GTAL D YAKSGD E
Sbjct: 308 AGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAER 367
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACS 563
+++VF + K+ +WT ++ GLA G+ +E++ F++M E T++ P+E+T + VL ACS
Sbjct: 368 AQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACS 427
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H G V+ G +F SM+ ++ I+P +HY C+VD+LSR+GRL EAE + MP EP++ W
Sbjct: 428 HVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIW 487
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
++LL+GCK Y+N +A+R + + +L + YVLLSNIYA A RW + R+LM E+
Sbjct: 488 SALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMKER 547
Query: 684 GLRKSGGCSWVEVR 697
++KS G S VE++
Sbjct: 548 KIQKSLGHSSVEMK 561
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 201/450 (44%), Gaps = 79/450 (17%)
Query: 82 LNGFDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+NG++L VHNC++ E + + TAL+ + G +E ++
Sbjct: 118 VNGYNLGQCVHNCIVKTGF----------------EVDVYAATALLQMYAACGDMEAALK 161
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ P NV++WT+ I G + N EA++++ + V PNE+T ++ ACA D
Sbjct: 162 VFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRD 221
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G V + G + F +V+ T I+D+
Sbjct: 222 LNAGRWVHDRTGQMGLDP------------------------FQSNSNFNVILATAIVDM 257
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + G L AR +F++MP RN V+W+ MI YNQ G EA LF M F P+ + F
Sbjct: 258 YAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGFDPDKATF 317
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
V+ A A L AL SG +HA+V K + D I AL+D+Y+K G+ + + VF + +
Sbjct: 318 LCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQK 377
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
KD V +W S+I G ++G EEA F M Q D
Sbjct: 378 KD---VTAWTSLIIGLAMHGHGEEALTFFKKM-------------------QEDTAL--- 412
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKD--LHGKIIKLGFPYDVFLGTALTDTYA 497
IP++ T+ VL A + V +E GK+ + K + P G + D +
Sbjct: 413 --------IPDEITYIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYG-CMVDLLS 463
Query: 498 KSGDIESSRRVFDRMP-DKNEISWTVMVRG 526
++G + + R+ ++MP + N W+ ++ G
Sbjct: 464 RAGRLGEAERLVEKMPVEPNTAIWSALLNG 493
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 192/391 (49%), Gaps = 45/391 (11%)
Query: 248 RDVVSWTVILD--VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
+DV+ + ++D + + G+L A+ +F+++ + W+ MI Y+ S P+EA ++R
Sbjct: 35 QDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYR 94
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
+M + + P+ F VL A + + G VH ++K G E DV+ + AL+ +Y+ CG
Sbjct: 95 EMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACG 154
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ + VFD I + + VV+W S+I G N EA ++ +M WS
Sbjct: 155 DMEAALKVFDDIPKWN---VVAWTSLIAGCISNDCPSEAVRVYKDMEL-----WSV---- 202
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP-- 483
PN+ T +VL A A L G+ +H + ++G
Sbjct: 203 ----------------------APNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPF 240
Query: 484 -----YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
++V L TA+ D YAK G ++++R +F++MP +N ++W M+ + G A E+++
Sbjct: 241 QSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALD 300
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LF +M P++ T L V+ AC+H G + G + ++ N+ + T +VDM
Sbjct: 301 LFSDMRIAGFDPDKATFLCVIGACAHLGALVSG-QALHAYVSKTNLTDDTAIGTALVDMY 359
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++SG A+ + + + D AW SL+ G
Sbjct: 360 AKSGDAERAQQVFSELQ-KKDVTAWTSLIIG 389
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 148/293 (50%), Gaps = 20/293 (6%)
Query: 355 NALIDLYSKCGETKD-----GRLVFDSIVEKDVAHVVSWNSMIG--GYGLNGQMEEAKEL 407
N+++ L KC + G ++ S+++ V+ + ++ Y +G + AK +
Sbjct: 6 NSILSLLEKCKTMAELKRLHGLMITTSVIQD----VIPLSRLVDFCAYSDSGNLNYAKSV 61
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ + + + W+++I GY + D ++ EM G P+ TF VL A + V
Sbjct: 62 FNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGY 121
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
G+ +H I+K GF DV+ TAL YA GD+E++ +VFD +P N ++WT ++ G
Sbjct: 122 NLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGC 181
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP- 586
+ E++ ++++ME S+ PNE+T+++VL AC+ S ++ G ++ + + P
Sbjct: 182 ISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAG-RWVHDRTGQMGLDPF 240
Query: 587 ------NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
N T +VDM ++ G L A D N MP + AW S++ Y
Sbjct: 241 QSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHR-NLVAWNSMIGAYNQY 292
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 16/232 (6%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD--TYAKSGDIESSRRV 508
K ++S+L ++ + K LHG +I DV + L D Y+ SG++ ++ V
Sbjct: 2 KKHYNSILSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSV 61
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+++ + W M++G + S E++ ++ EM + P+ T VL ACS
Sbjct: 62 FNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGY 121
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ G N + + + T ++ M + G + A + +P + + AW SL++
Sbjct: 122 NLGQCVHNCIVKT-GFEVDVYAATALLQMYAACGDMEAALKVFDDIP-KWNVVAWTSLIA 179
Query: 629 GCKTYKNEQIAERAVKN--LWKLAEEHPAGYVLLSNIYA-------SAGRWI 671
GC + A R K+ LW +A P +++ + A +AGRW+
Sbjct: 180 GCISNDCPSEAVRVYKDMELWSVA---PNEITMVNVLVACARSRDLNAGRWV 228
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 107/287 (37%), Gaps = 102/287 (35%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LFS F+ T LC++ ++ G+ALH ++ KT + + + T L+ MY
Sbjct: 301 LFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYA 360
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
S G+ E AQ++F + +++ +WT+LI G
Sbjct: 361 KS-------------------------------GDAERAQQVFSELQKKDVTAWTSLIIG 389
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
HG EE++ +F++ +Q ++ + P+E+T+
Sbjct: 390 LAMHGHGEEALTFFKK----------------MQE--------------DTALIPDEITY 419
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+ AC+ + G+V+ ++ F M+
Sbjct: 420 IGVLSACSHV-----------------------------------GKVEDGKNHFISMKN 444
Query: 248 RDVVSWTV-----ILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMI 288
+ T ++D+ G LGEA R+ ++MP E N WS ++
Sbjct: 445 VHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALL 491
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 108/727 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ T V G +HG +K + Y+ T L+ +Y EA + L
Sbjct: 126 VLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRT 185
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PER----NEVSWTALISGFMKHGRVEE 136
V N +I Q G A LFD M P+R + VS + + GF++ GR
Sbjct: 186 PVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSAL-GFLEGGRQIH 244
Query: 137 SMWY------------------------------FERNPFQNVISWTAAICGFVQNGFSF 166
Y F+ ++N++SWT I G++QN F+
Sbjct: 245 GYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNA 304
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EA+ +F + ++G +P+ +SI +C + G + + KA E V N+LI
Sbjct: 305 EAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALI 364
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
D++ + L EAR +FD + E + +S++
Sbjct: 365 -------------------------------DMYAKCEHLTEARAVFDALAEDDAISYNA 393
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MI Y+++ EA +F++M +S +P+ F +L +S A+ +H ++K G
Sbjct: 394 MIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSG 453
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
D++ ++ALID+YSKC D + VF+ + KD+
Sbjct: 454 TSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDM------------------------ 489
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
V W+++I G+ +++Q + +FN++LLSG PN+ TF +++ ++++AS
Sbjct: 490 ----------VIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLAS 539
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
+ G+ H IIK G D + AL D YAK G I+ R +F+ ++ I W M+
Sbjct: 540 MFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITT 599
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
A+ G+A+E++ +F M + + PN +T + VL AC+H+G V +GL +FNSM+ Y+I+P
Sbjct: 600 YAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEP 659
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
HY VV++ RSG+L A++FI MP +P + W SLLS C + N +I A + +
Sbjct: 660 GIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAE-M 718
Query: 647 WKLAEEHPAG-YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
LA+ +G YVLLSNIYAS G W D N+R+ M G K GCSW+EV +VH F
Sbjct: 719 ALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIV 778
Query: 706 KTDHNPK 712
+ +P+
Sbjct: 779 RGREHPE 785
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 238/522 (45%), Gaps = 71/522 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-P 182
L+ G+ GR+ ++ F+R P +N++SW + I + Q+G A+ LF+ ++ + P
Sbjct: 59 LLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVP 118
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NE +S+ +AC + LG V G+ K + +V V +LI L K+G +D A VF
Sbjct: 119 NEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVF 178
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ R V+W ++ + ++G G A +FD M
Sbjct: 179 HALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEG---------------------- 216
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+P+ + +SA ++L L G +H + + E D + N LIDLY
Sbjct: 217 ---------VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYC 267
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC R +FD + ++ +VSW +MI GY N EA +F NM +
Sbjct: 268 KCSRLSAARKLFDCMEYRN---LVSWTTMISGYMQNSFNAEAITMFWNMTQ--------- 315
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+G P+ +S+L + S+A++ +G+ +H +IK
Sbjct: 316 ----------------------AGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADL 353
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D ++ AL D YAK + +R VFD + + + IS+ M+ G +++ E++N+F+
Sbjct: 354 EADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQR 413
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M S+ P+ LT +S+L S S L + K + + + + ++D+ S+
Sbjct: 414 MRFFSLRPSLLTFVSLL-GVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCS 472
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+++A+ N + ++ D W S++ G +NEQ E A+K
Sbjct: 473 LVNDAKTVFNMLHYK-DMVIWNSMIFG--HAQNEQ-GEEAIK 510
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 186/393 (47%), Gaps = 39/393 (9%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D+ ++L + +G L +AR +FD MP RN VSW +I+ Y Q G + A LF
Sbjct: 52 DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQ 111
Query: 309 RYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
+ S + PN + VL A KA+ G VH +K+ ++ +V++ ALI+LY+K G
Sbjct: 112 KASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCM 171
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
+ LVF ++ V V+WN++I GY G A ELFD M
Sbjct: 172 DEAMLVFHAL---PVRTPVTWNTVITGYAQIGCGGVALELFDRMG--------------- 213
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+ G P++ +S + A +++ LE G+ +HG + D
Sbjct: 214 ----------------IEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTS 257
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ L D Y K + ++R++FD M +N +SWT M+ G ++ + E+I +F M +
Sbjct: 258 VINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAG 317
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
P+ S+L +C + +G + ++ +++ + ++DM ++ L+EA
Sbjct: 318 WQPDGFACTSILNSCGSLAAIWQG-RQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEA 376
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+++ E D+ ++ +++ G KN +AE
Sbjct: 377 RAVFDALA-EDDAISYNAMIEGYS--KNRDLAE 406
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 18/281 (6%)
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGE 447
N ++ GY G++ +A+ LFD MP RN VSW ++IS Y +H + D ++F S E
Sbjct: 57 NLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCE 116
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
+PN+ +SVL A ++ G+ +HG +KL +V++GTAL + YAK G ++ +
Sbjct: 117 VPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAML 176
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF +P + ++W ++ G A+ G ++ LF+ M + P+ + S + ACS G
Sbjct: 177 VFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGF 236
Query: 568 VD-----KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
++ G Y ++ E ++ ++D+ + RLS A + M + + +
Sbjct: 237 LEGGRQIHGYAYRSATETDTSV------INVLIDLYCKCSRLSAARKLFDCMEYR-NLVS 289
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLS 661
W +++SG Y A+ W + + P G+ S
Sbjct: 290 WTTMISG---YMQNSFNAEAITMFWNMTQAGWQPDGFACTS 327
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 202/503 (40%), Gaps = 76/503 (15%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
C +L S + QGR +H H+IK + + Y+ L+ MY EA + L
Sbjct: 324 ACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDAL 383
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM----------------------------- 113
D + +N MI + +L EA +F M
Sbjct: 384 AEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSK 443
Query: 114 ----------PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ + +ALI + K V ++ F +++++ W + I G QN
Sbjct: 444 QIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNE 503
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EA+KLF +LL SG+ PNE TF ++ + + G I KAG + V N
Sbjct: 504 QGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSN 563
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER---- 279
+LI + K G + R +F+ DV+ W ++ + + G EA ++F M E
Sbjct: 564 ALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEP 623
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N V++ +++ +G+ E F M + Y +P ++ V++ RSG
Sbjct: 624 NYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFG-----RSG--- 675
Query: 339 HAHVLKIGIEKDVFISNALI--DLYSKC---GETKDGRLVFDSIV---EKDVAHVVSWNS 390
H K IE+ A + L S C G + GR + + D V ++
Sbjct: 676 KLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSN 735
Query: 391 MIGGYGLNGQMEEAKELFDN--MPKRNDVSW--------SAIISGYLEHKQFDLVFAVFN 440
+ GL + ++ D+ K SW + I+ G EH + +L+++V +
Sbjct: 736 IYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGR-EHPEAELIYSVLD 794
Query: 441 EM--LLS--GEIPNKSTFSSVLC 459
E+ L+ G +P+ S ++LC
Sbjct: 795 ELTSLIKNLGYVPDTSD-HTLLC 816
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 58/315 (18%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
FS+ P + T + LL +SQ + + +HG +IK+G + Y + L+ +Y
Sbjct: 416 FFSLRPS------LLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYS 469
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFD-----GMPERNEVSWT 122
+A + L+ D+V+ N MI + Q EEA +LF+ GM NE ++
Sbjct: 470 KCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAP-NEFTFV 528
Query: 123 ALIS-----------------------------------GFMKHGRVEESMWYFERNPFQ 147
AL++ + K G ++E FE +
Sbjct: 529 ALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE 588
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+VI W + I + Q+G + EAL++F + E+ V+PN VTF + ACA GL+ F
Sbjct: 589 DVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHF 648
Query: 208 GLI-----FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-WTVILDVFI 261
+ + G E + SV N L + G++ A+ +RM + + W +L
Sbjct: 649 NSMKSNYDIEPGIEHYASVVN----LFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACH 704
Query: 262 EMGDLGEARRIFDEM 276
G+ E R EM
Sbjct: 705 LFGN-AEIGRYAAEM 718
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+H + G D+FL L Y+ G + +R +FDRMP +N +SW ++ + G
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99
Query: 533 AKESINLFEEMEKTSI-TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+I+LF +K S PNE + SVL AC+ S V G + + + ++ N
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLG-EQVHGIAVKLDLDANVYVG 158
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T ++++ ++ G + EA +++P W ++++G
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALPVRTPVT-WNTVITG 195
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 298/583 (51%), Gaps = 72/583 (12%)
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ W+++ NV SW + I + G S EAL+ F L + G+ P +F K+C+
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ D G F GFE + V ++LI
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALI------------------------------ 1184
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM----TRYSF 312
D++ + G L +AR +FDE+P RN VSW+ MI Y Q+ + A LF+ T
Sbjct: 1185 -DMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVED 1243
Query: 313 KPNTSCFSIVLSALASLKALRSGMH----VHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
N S+V+ ++ S + SG VH V+K G + + + N L+D Y+KCG+
Sbjct: 1244 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 1303
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+ VFD + EKD +SWNSMI Y +G EA E+F M + V ++A+
Sbjct: 1304 VSKKVFDWMEEKDD---ISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAV------ 1354
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
T S+VL A A +L GK +H ++IK+ Y+V +
Sbjct: 1355 ------------------------TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 1390
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GT++ D Y K G +E +++ FDRM +KN SWT MV G G AKE++++F +M + +
Sbjct: 1391 GTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGV 1450
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
PN +T +SVL ACSH+GLV++G +FN+M+ Y+I+P HY C+VD+ R+G L+EA
Sbjct: 1451 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 1510
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ I M +PD W SLL C+ +KN + E A + L++L ++ YVLLSN+YA AG
Sbjct: 1511 NLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 1570
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
RW D +R LM + L K G S VE++ +VH F +P
Sbjct: 1571 RWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHP 1613
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 188/352 (53%), Gaps = 3/352 (0%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ ++ G + A +F ++ +W+++I +G E+A L++ M +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
F V+ A + ++ G VH ++K G DVF+ N LID Y KCG T+ VF+
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ V +VVSW ++I G G ++EA+ +FD +P +N VSW+A+I+GY+ ++Q +
Sbjct: 185 KM---RVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F M PN+ T S++ A + L G+ +H IK V+LGTAL D
Sbjct: 242 LELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDM 301
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y+K G I+ + VF+ MP K+ +W M+ L G +E++NLF EME+ ++ P+ +T
Sbjct: 302 YSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITF 361
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ VL AC H V +G YF M Y I P HY C+ ++ +RS L EA
Sbjct: 362 IGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 155/292 (53%), Gaps = 3/292 (1%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI + HGR+ ++ F + +W I NG S +AL L+ ++ G+ +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ TF + KAC LG V G + K GF V V N+LI K G A VF+
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+M R+VVSWT ++ I GDL EARRIFDE+P +N VSW+ MI Y ++ PEEA L
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F++M + PN ++ A + L G +H + +K IE V++ ALID+YSK
Sbjct: 245 FKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSK 304
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
CG KD VF+++ K + +WNSMI G++G +EA LF M + N
Sbjct: 305 CGSIKDAIEVFETMPRKSLP---TWNSMITSLGVHGLGQEALNLFSEMERVN 353
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 204/458 (44%), Gaps = 83/458 (18%)
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
SL ++ + F + +C ++ G + Q G E + +ALI + K
Sbjct: 1132 SLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGF-ETDLFVSSALIDMYSKC 1190
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--------SGVKPN 183
G+++++ F+ P +NV+SWT+ I G+VQN + AL LF LE + V +
Sbjct: 1191 GQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 1250
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
V S+ AC+ ++ + V G + K GF+ + V N+L+ K G+ +++ VFD
Sbjct: 1251 SVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD 1310
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
ME++D +SW ++ V+ + G GEA +F M V RY
Sbjct: 1311 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV-------RY------------ 1351
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
N S VL A A ALR+G +H V+K+ +E +V + ++ID+Y K
Sbjct: 1352 -----------NAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 1400
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG + + FD + EK+V SW +M+ GYG++G+ AKE D
Sbjct: 1401 CGRVEMAKKTFDRMKEKNVK---SWTAMVAGYGMHGR---AKEALD-------------- 1440
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+F +M+ +G PN TF SVL A + +E+G +
Sbjct: 1441 --------------IFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFN---AMKHK 1483
Query: 484 YDVFLGT----ALTDTYAKSGDIESSRRVFDRM---PD 514
YD+ G + D + ++G + + + RM PD
Sbjct: 1484 YDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPD 1521
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 41/316 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYL-------TTRLLIMYLGSRKSLEANEIV 79
+++ T L Q L+ +++ GI +++ T L + LG K + + I
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG--KVVHGSLIK 153
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+G D+ V N +I+ + G+ A ++F+ M RN VSWT +ISG + G ++E+
Sbjct: 154 YGFSG-DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ P +NV+SWTA I G+++N EAL+LF ++ + PNE T S+ KAC E+
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG + H + I + + +G T ++D+
Sbjct: 273 LTLGRGI-----------HDYAIKNCIEIGVYLG--------------------TALIDM 301
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + G + +A +F+ MP ++ +W+ MI G +EA LF +M R + KP+ F
Sbjct: 302 YSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITF 361
Query: 320 SIVLSALASLKALRSG 335
VL A +K ++ G
Sbjct: 362 IGVLCACVHIKNVKEG 377
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 69/335 (20%)
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L + K + +HA +++ G+ D ++ LI LYS G L+F I
Sbjct: 34 LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN---PCT 90
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+WN +I +NG E+A L+ NM +
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNM-------------------------------VCQ 119
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG----- 500
G +K TF V+ A + S++ GK +HG +IK GF DVF+ L D Y K G
Sbjct: 120 GIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFA 179
Query: 501 --------------------------DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
D++ +RR+FD +P KN +SWT M+ G + +
Sbjct: 180 LKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPE 239
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-TC 593
E++ LF+ M+ +I PNE T++S++ AC+ G++ G + I N G + T
Sbjct: 240 EALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA--IKNCIEIGVYLGTA 297
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++DM S+ G + +A + +MP W S+++
Sbjct: 298 LIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMIT 331
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 183/463 (39%), Gaps = 93/463 (20%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL 62
+SLR L I +SF I++C L ++ GR H G + ++++ L
Sbjct: 1131 SSLRKLGLIPTRSSFPCTIKSCSALCD-------LVSGRMSHQQAFVFGFETDLFVSSAL 1183
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF-DGMPERNEVS- 120
+ MY + +A + ++ ++V MI +Q + A LF D + E EV
Sbjct: 1184 IDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVED 1243
Query: 121 ---------------------------------------------WTALISGFMKHGRVE 135
L+ + K G+
Sbjct: 1244 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 1303
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKAC 194
S F+ ++ ISW + I + Q+G S EAL++F ++ GV+ N VT S++ AC
Sbjct: 1304 VSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLAC 1363
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A R G + + K E +V V S+I + K G V++A+ FDRM++++V SWT
Sbjct: 1364 AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWT 1423
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
M+A Y G +EA +F +M R KP
Sbjct: 1424 -------------------------------AMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452
Query: 315 NTSCFSIVLSALASLKALRSGMH-VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
N F VL+A + + G H +A K IE + ++DL+ + G + +
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 1512
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMP 412
+ K V W S++G ++ ++ A++LF+ P
Sbjct: 1513 IKRMKMK--PDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDP 1553
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E N T++I + K GRVE + F+R +NV SWTA + G+ +G + EAL +F K
Sbjct: 1385 EYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYK 1444
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMG 233
++ +GVKPN +TF S+ AC+ G F + K E + ++ L + G
Sbjct: 1445 MVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAG 1504
Query: 234 EVDLARSVFDRME-KRDVVSWTVILDV--FIEMGDLGE--ARRIFDEMPE 278
++ A ++ RM+ K D V W +L + DLGE A+++F+ P+
Sbjct: 1505 CLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPD 1554
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI + K G +++++ FE P +++ +W + I +G EAL LF ++ VK
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVK 355
Query: 182 PNEVTFSSICKACAEINDFRLGLSVF 207
P+ +TF + AC I + + G + F
Sbjct: 356 PDAITFIGVLCACVHIKNVKEGCAYF 381
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 266/442 (60%), Gaps = 6/442 (1%)
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSF-KPNTSCFSIV 322
+L A+ IF ++P N SW+ +I + G E A F RQ++ S PN ++ +
Sbjct: 60 NLYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSL 119
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+ A A L+A+ G+ VHA V+K G++ ++ + +L+D+Y K E VFD + +DV
Sbjct: 120 IKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDV 179
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VSWN+M+ GY L G +E A+ +FD M +R+ +SW+A+I GY+++ ++ VF+EM
Sbjct: 180 ---VSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEM 236
Query: 443 L-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
+ G +P+ T SVL A A V +L+ G+ + + G +++LG AL D YAK G
Sbjct: 237 QKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGT 296
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+E +RR+FD M +++ ISW+ M+ G G A E+ + +M + + PNE+T + +L A
Sbjct: 297 MEEARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSA 356
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH+GLVDKG++ F+ M Y I P HY CV+D+LSR+GRL EAED INSMP EP+
Sbjct: 357 CSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVI 416
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LL GC+ +K+ + ER ++L +L E+ YV ++ AS GR DA N M
Sbjct: 417 VWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQ 476
Query: 682 EKGLRKSGGCSWVEVRNQVHFF 703
KG+ K GCS +EV N VH F
Sbjct: 477 HKGIIKDPGCSKIEVHNTVHEF 498
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 199/411 (48%), Gaps = 45/411 (10%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--SGVK 181
LI + + + F + P NV SW A I + G AL F + L S
Sbjct: 51 LIGACAANANLYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPN 110
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PNE ++S+ KACA + GL V ++ K+G + ++ + SL+ + K E A V
Sbjct: 111 PNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQV 170
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M RDVVSW ++ + GDL ARR+FD+M ER+ +SW+ MI Y Q+G +A
Sbjct: 171 FDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAI 230
Query: 302 RLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+F +M + P+ VLSA A + AL G + V G ++++ NALID+
Sbjct: 231 EVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDM 290
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG ++ R +FD + E+D V+SW++MI G G +G +EA
Sbjct: 291 YAKCGTMEEARRIFDGMRERD---VISWSTMICGSGTHGDADEA---------------- 331
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
F +++ML G PN+ TF +L A + ++KG +L ++I+
Sbjct: 332 ---------------FGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQ- 375
Query: 481 GFPYDVFLGTA----LTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRG 526
Y + + D +++G ++ + + + MP + N I W ++ G
Sbjct: 376 --EYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGG 424
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 190/414 (45%), Gaps = 46/414 (11%)
Query: 9 FSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLG 68
S+ + N YI T L +K + G +H +IK+G+ +L T L+ MY
Sbjct: 103 LSLPSAPNPNEYIYTSL--IKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFK 160
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
R+ A ++ FD MP R+ VSW ++SG+
Sbjct: 161 FREPASAGQV-------------------------------FDEMPLRDVVSWNTMVSGY 189
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTF 187
G +E + F++ ++VISW A I G+VQNG +A+++F ++ + GV P++VT
Sbjct: 190 CLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTL 249
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
S+ ACA + G + + G ++ + N+LI + K G ++ AR +FD M +
Sbjct: 250 VSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRE 309
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRL 303
RDV+SW+ ++ GD EA + +M E NEV++ +++ + +G ++ L
Sbjct: 310 RDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIEL 369
Query: 304 FRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDL 360
F +M + Y P + V+ L+ R+G A L + IE +V + AL+
Sbjct: 370 FSRMIQEYRIVPKVGHYGCVIDLLS-----RAGRLDEAEDLINSMPIEPNVIVWGALLGG 424
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+ + G V ++E D + S+ + G G++++A + M +
Sbjct: 425 CRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHK 478
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 7/200 (3%)
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK- 545
+ L A + ++ ++ +F ++P+ N SW +++ G + ++N F
Sbjct: 46 LIAVKLIGACAANANLYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSL 105
Query: 546 -TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
++ PNE S++ AC+ + GLK +++ + N T +VDM +
Sbjct: 106 PSAPNPNEYIYTSLIKACAGLEAIADGLK-VHAVVIKSGLDNNIHLGTSLVDMYFKFREP 164
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
+ A + MP D +W +++SG + + A R ++ E + + Y
Sbjct: 165 ASAGQVFDEMPLR-DVVSWNTMVSGYCLCGDLESARRVFD---QMLERDVISWNAMIGGY 220
Query: 665 ASAGRWIDAMNVRKLMTEKG 684
G++ DA+ V M + G
Sbjct: 221 VQNGKYSDAIEVFHEMQKVG 240
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 210/701 (29%), Positives = 352/701 (50%), Gaps = 105/701 (14%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG---RVEESMWYF 141
F ++ +C+ + + G L A RL + E + V + +LIS + K G + E+
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHA-RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
R ++V+SW+A + + NG +A+K+F++ LE G+ PN+ ++++ +AC+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 202 LGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G G + K G FE V V SLI + +K GE
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GE-------------------------- 216
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
A ++FD+M E N V+W++MI R Q G+P EA R F M F+ + S
Sbjct: 217 ---NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 321 IVLSALASLK-----------ALRSG-------------------------------MHV 338
V SA A L+ A+RSG M
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 339 HA----HVLKIGIEKDVFISNALIDLYSK--------------------CGETKD---GR 371
H+ L G K+ ++ I+L+S+ CG D G+
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 372 LVFDSIVEKDVAHVVS-WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
V ++ +A S NS+I + + +ME+A+ F+++ ++N VS++ + G +
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
F+ F + +E+ + TF+S+L A+V S+ KG+ +H +++KLG + +
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL Y+K G I+++ RVF+ M ++N ISWT M+ G A+ G+A + F +M + + P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
NE+T +++L ACSH GLV +G ++FNSM + IKP HY C+VD+L R+G L++A +F
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
IN+MPF+ D W + L C+ + N ++ + A + + +L PA Y+ LSNIYA AG+W
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++ +R+ M E+ L K GGCSW+EV +++H F+ +P
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHP 734
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 204/474 (43%), Gaps = 79/474 (16%)
Query: 175 LLESGVKP-NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
+ G++P + VTFSS+ K+C DFRLG V + + E + NSLI+L K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 234 EVDLARSVFDRME---KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ A VF+ M KRDVVSW S M+A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSW-------------------------------SAMMAC 140
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEK 349
Y +G +A ++F + PN C++ V+ A ++ + G ++K G E
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
DV + +LID++ K GE E A ++FD
Sbjct: 201 DVCVGCSLIDMFVK-GEN--------------------------------SFENAYKVFD 227
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M + N V+W+ +I+ ++ F +M+LSG +K T SSV A A + +L
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAK---SGDIESSRRVFDRMPDKNEISWTVMVRG 526
GK LH I+ G DV +L D YAK G ++ R+VFDRM D + +SWT ++ G
Sbjct: 288 GKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 527 -LAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
+ A E+INLF EM + + PN T S AC + G + +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK-RGL 404
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTYKNEQ 637
N V+ M +S R+ +A+ S+ E + ++ + L G C+ EQ
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNLNFEQ 457
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 212/716 (29%), Positives = 360/716 (50%), Gaps = 103/716 (14%)
Query: 27 LLKDITSQNLVIQGRALHG-----HLIKTGIHKERYLTTRLLIMYLGSR-KSLEANEIVK 80
L+D+ + ++ G A +G +I ++ +T L++ L + + EA ++ K
Sbjct: 382 FLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFK 441
Query: 81 DLNGFDLVVHN-----CMINANIQWGNLEEAQR--------LF-DGMPERNEVSWTALIS 126
++ DLV N +++ ++ NL+E +R LF G+ + AL++
Sbjct: 442 EMK--DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVN 499
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
+ K ++ + F+ P ++ +SW + I G N EA+ F + +G+ P+ +
Sbjct: 500 MYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFS 559
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
S +C+ + LG + G FK G + VSV N+L+TL
Sbjct: 560 VISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTL------------------ 601
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI---ARYNQSGYPEEAFRL 303
+ E + E +++F +MPE ++VSW+ I A+Y S +A +
Sbjct: 602 -------------YAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVL--QALKY 646
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M + ++PN F +L+A++S L G +HA +LK + D I NAL+ Y K
Sbjct: 647 FLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGK 706
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAI 422
C QME+ + +F M +R D VSW+++
Sbjct: 707 CE----------------------------------QMEDCEIIFSRMSERRDEVSWNSM 732
Query: 423 ISGYLE----HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
ISGYL HK DLV+ M+ G+ + TF++VL A ASVA+LE+G ++H +
Sbjct: 733 ISGYLHSGILHKAMDLVWP----MMQRGQKLDGFTFATVLSACASVATLERGMEVHACAV 788
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ DV +G+AL D YAK G I+ + R F+ MP +N SW M+ G A G+ ++++
Sbjct: 789 RACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALK 848
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
+F M++ +P+ +T + VL ACSH GLVD+G K+F SM +Y + P H++C+VD+L
Sbjct: 849 IFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLL 908
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGC--KTYKNEQIAERAVKNLWKLAEEHPAG 656
R+G + + EDFI +MP +P+ W ++L C +N ++ +RA K L +L ++
Sbjct: 909 GRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVN 968
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YVLLSN++A+ G W D + R M + ++K GCSWV +++ VH F +P+
Sbjct: 969 YVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPE 1024
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 167/727 (22%), Positives = 294/727 (40%), Gaps = 165/727 (22%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
LH L KTG + + L+ +Y+ + A ++ ++ +LV +C+I+ Q
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221
Query: 103 LEEAQRLFDG------MPER----------NEVSWTALISGFMKH--------------- 131
+EA LF G +P + T + G H
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281
Query: 132 -----------GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF----LKLL 176
G ++++ F+ F+N ++W + I + + G + A KLF ++ +
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGL--SVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
E ++PNE T S+ A + D L L + I K+GF + + V ++L+ + G
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401
Query: 235 VDLARSVFDRMEKRDVV----------------------------------SWTVILDVF 260
+D A+ +F +M R+ V S V+L F
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTF 461
Query: 261 IEMGDLGEARR----------------------------------------IFDEMPERN 280
E +L E +R +F MP ++
Sbjct: 462 TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKD 521
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV--LSALASLKALRSGMHV 338
VSW+ MI+ + + EEA F M R P+ FS++ LS+ +SL L G +
Sbjct: 522 TVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSN--FSVISTLSSCSSLGWLTLGRQI 579
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H K G++ DV +SNAL+ LY++ + + VF + E D VSWNS IG
Sbjct: 580 HGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYD---QVSWNSFIGALA-- 634
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
+ A + L++ F EM+ +G PN+ TF ++L
Sbjct: 635 -------------------KYEASVLQALKY---------FLEMMQAGWRPNRVTFINIL 666
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD-KNE 517
A +S + L G +H I+K D + AL Y K +E +F RM + ++E
Sbjct: 667 AAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDE 726
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
+SW M+ G SG ++++L M + + T +VL AC+ +++G++ ++
Sbjct: 727 VSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGME-VHA 785
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
++ + + +VDM ++ G++ A F MP + +W S++SG Y
Sbjct: 786 CAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISG---YARHG 841
Query: 638 IAERAVK 644
++A+K
Sbjct: 842 HGQKALK 848
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/583 (22%), Positives = 239/583 (40%), Gaps = 109/583 (18%)
Query: 66 YLGSRKSLEANEIVKDL--NGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
Y S +AN + L GF D+ N +IN ++ GNL A++LFD MP++N VSW
Sbjct: 150 YKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSW 209
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ LIS G+ QN EA LF ++ SG+
Sbjct: 210 SCLIS-------------------------------GYTQNRMPDEACSLFKGVISSGLL 238
Query: 182 PNEVTFSSICKACAEIND--FRLGLSVFGLIFKAGFEKHVSVCNSLITL-SLKMGEVDLA 238
PN S +AC + +LG+ + I K + + N L+++ S G +D A
Sbjct: 239 PNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDA 298
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VFD ++ R+ V+W I+ V+ GD A ++F M
Sbjct: 299 HRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEG------------------ 340
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLK--ALRSGMHVHAHVLKIGIEKDVFISNA 356
+ +PN +++A SL L + + K G +D+++ +A
Sbjct: 341 ---------VELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSA 391
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
L++ G+ G M+ AK +F M RN
Sbjct: 392 LVN----------------------------------GFARYGLMDCAKMIFKQMYDRNA 417
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE----KGKD 472
V+ + ++ G Q + VF EM EI N + +L ++L+ KG++
Sbjct: 418 VTMNGLMVGLARQHQGEEAAKVFKEMKDLVEI-NSESLVVLLSTFTEFSNLKEGKRKGQE 476
Query: 473 LHGKIIKLGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H + + G + +G AL + Y K I+++ VF MP K+ +SW M+ GL +
Sbjct: 477 VHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNE 536
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+E+++ F M++ + P+ +++S L +CS G + G + + + + +
Sbjct: 537 RFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG-RQIHGEGFKWGLDLDVSVS 595
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
++ + + + ++E + MP E D +W S + Y+
Sbjct: 596 NALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGALAKYE 637
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 57/303 (18%)
Query: 296 YPEEAFRLFRQM-----TRYSFKPNTSCFSIVLSALAS-------LKALRSGMHVHAHVL 343
+PE A LF ++ + Y+F + + L L S +L H+H +
Sbjct: 108 FPEMASHLFMRLLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDANHLHLQLY 167
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K G DVF N LI++Y + G R +FD + +K+ +VSW+ +I GY N +E
Sbjct: 168 KTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKN---LVSWSCLISGYTQNRMPDE 224
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL--CAS 461
A LF +IS SG +PN S L C
Sbjct: 225 ACSLF-----------KGVIS--------------------SGLLPNHFAVGSALRACQQ 253
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK-SGDIESSRRVFDRMPDKNEISW 520
++ G +H I KL D+ L L Y+ SG I+ + RVFD + +N ++W
Sbjct: 254 CGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTW 313
Query: 521 TVMVRGLAESGYAKESINLFEEME----KTSITPNELTILS-VLFACSHSGLVDKGLKYF 575
++ G A + LF M+ + ++ PNE T+ S V ACS L D GL
Sbjct: 314 NSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACS---LADCGLVLL 370
Query: 576 NSM 578
M
Sbjct: 371 EQM 373
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 201/626 (32%), Positives = 319/626 (50%), Gaps = 71/626 (11%)
Query: 83 NGFDLVVHNCMINANIQW--GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
N L++ C ++Q +L + +RL D + + AL+ ++ ++
Sbjct: 22 NPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLP----DTIDYALSI 77
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F ++ I G AL LF K+ E V+ ++ TFSS+ KAC+ +
Sbjct: 78 FNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKAL 137
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
R G V LI K+GF+ + V N+LI + +
Sbjct: 138 REGEQVHALILKSGFKSNEFVENTLIQM-------------------------------Y 166
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
G +G AR +FD MPER+ V+W+ M++ Y ++G +E +LFR++ + +
Sbjct: 167 ANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMI 226
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VL A L L G + +++ G+ ++ ++ +LID+Y+KCG
Sbjct: 227 SVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCG--------------- 271
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
Q++ A++LFD M KR+ V+WSA+ISGY + + +F+
Sbjct: 272 -------------------QVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFH 312
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM PN+ T SVL + A + + E GK +H I K V LGT L D YAK G
Sbjct: 313 EMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCG 372
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
I+ S VF M KN +WT +++GLA +G K ++ F M + + PN++T + VL
Sbjct: 373 YIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLS 432
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSH+ LVD+G FNSM ++I+P HY C+VD+L R+G L EA FI++MPF P++
Sbjct: 433 ACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNA 492
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL+ C+ +KN ++AE++++++ +L H Y+LLSN YA GR DA+ VR L+
Sbjct: 493 VVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLI 552
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQK 706
EK ++K GCS +E+ VH FF +
Sbjct: 553 KEKEIKKIPGCSLIELDGVVHEFFSE 578
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 213/516 (41%), Gaps = 102/516 (19%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K + + D F V+ C ++ G A L G + NE LI +
Sbjct: 110 KKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGF-KSNEFVENTLIQMYAN 168
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G++ + F+ P +++++W + + G+ +NG E +KLF K+LE ++ ++VT S+
Sbjct: 169 CGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISV 228
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
AC + + +G + I G ++ ++ SLI + K G+VD AR +FD M+KRDV
Sbjct: 229 LMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDV 288
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
V+W+ + I+ Y Q+ +EA LF +M +
Sbjct: 289 VAWSAM-------------------------------ISGYAQADRCKEALNLFHEMQKG 317
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+ PN VL + A L A +G VH ++ K ++ V + LID Y+KCG
Sbjct: 318 NVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRS 377
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
VF E +V +W ++I G NG+ + A E F +M + NDV
Sbjct: 378 VEVFK---EMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE-NDVK------------ 421
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
PN TF VL A + +++G+ L
Sbjct: 422 ------------------PNDVTFIGVLSACSHACLVDQGRHL----------------- 446
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
S RR FD P + MV L +G+ +E+ + M P
Sbjct: 447 -----------FNSMRRDFDIEPRIEH--YGCMVDILGRAGFLEEAYQFIDNM---PFPP 490
Query: 551 NELTILSVLFAC-SHSG--LVDKGLKYFNSMEPIYN 583
N + ++L +C +H + +K L++ +EP ++
Sbjct: 491 NAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHS 526
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 157/390 (40%), Gaps = 90/390 (23%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G + +++ G+ + LTT L+ MY + A ++ +++ D+V + MI+ Q
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ 300
Query: 100 WGNLEEAQRLFDGMPE----RNEVS------------------W---------------- 121
+EA LF M + NEV+ W
Sbjct: 301 ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTL 360
Query: 122 -TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
T LI + K G ++ S+ F+ F+NV +WTA I G NG AL+ F +LE+ V
Sbjct: 361 GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV 420
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KPN+VTF + AC+ H + VD R
Sbjct: 421 KPNDVTFIGVLSACS----------------------HACL-------------VDQGRH 445
Query: 241 VFDRMEKRD------VVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIARYNQ 293
+F+ M +RD + + ++D+ G L EA + D MP N V W ++A
Sbjct: 446 LFNSM-RRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRA 504
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS-ALASLKALRSGMHVHAHVLKIGIEKD-- 350
E A + +TR +P S I+LS A + + + V + + + I+K
Sbjct: 505 HKNIEMAEKSLEHITR--LEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPG 562
Query: 351 ---VFISNALIDLYSKCGETKDGRLVFDSI 377
+ + + + +S+ GE K + + D++
Sbjct: 563 CSLIELDGVVHEFFSEDGEHKHSKEIHDAL 592
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 298/560 (53%), Gaps = 36/560 (6%)
Query: 140 YFERNPFQ--NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+F N Q ++ W I G ++ +A+ + + G++ + +TF + K+CA +
Sbjct: 26 HFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARV 85
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+D R G V K GFE V N+LI +
Sbjct: 86 SDVRQGQMVRVHSMKLGFESXSFVSNALIHM----------------------------- 116
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
++ G+L A+++FD M ER+ VSW+ +I Y Q ++ LFR+M + + ++
Sbjct: 117 --YVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSV 174
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+SA L G ++ ++ + G+ D+++ N LID+Y + G VF +
Sbjct: 175 TMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQM 234
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
EK++ VSWN+MI GY G + AK+LF+ MP R+ +SW+++I GY KQ
Sbjct: 235 KEKNI---VSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVK 291
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+F EM++S P++ T ++ L A A + SL+ G+ +H I K DVF+G +L D Y
Sbjct: 292 LFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYC 351
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G +E + +VF+ M ++ +SWT ++ GLA +G+A+ ++N+F++M K I P T +
Sbjct: 352 KCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVG 411
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
VL AC+H GLVDKG+++F SME Y + P +HY CVVD+L RSG L A +FI MP
Sbjct: 412 VLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIV 471
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
PD W LLS CK + N +AE K L L + YVL S+ YA + RW D + +R
Sbjct: 472 PDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIR 531
Query: 678 KLMTEKGLRKSGGCSWVEVR 697
KLM L+K S +EVR
Sbjct: 532 KLMEVTNLQKPCAYSSIEVR 551
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 203/428 (47%), Gaps = 70/428 (16%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N +I+ + +G L AQ++FDGM ER+
Sbjct: 109 VSNALIHMYVCFGELAMAQKVFDGMLERD------------------------------- 137
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SW + ICG+ Q + L LF ++ V+ + VT A ++++ +G +
Sbjct: 138 VVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVK 197
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I + G + + N+LI + + G +D A VF +M+++++VSW ++ + ++G+L
Sbjct: 198 YIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVA 257
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A+++F+EMP R+ +SW+ MI Y+ + EA +LF++M KP+ + LSA A
Sbjct: 258 AKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAH 317
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L +L +G VH ++ K I+ DVF+ N+LID+Y KCG + VF+ + +D VSW
Sbjct: 318 LGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRD---SVSW 374
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
S+I G +NG E A +FD +ML G
Sbjct: 375 TSIISGLAVNGFAESALNVFD-------------------------------QMLKEGIC 403
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF---PYDVFLGTALTDTYAKSGDIESS 505
P TF VL A A V ++KG + H K ++ + P G + D +SG ++ +
Sbjct: 404 PTHGTFVGVLLACAHVGLVDKGVE-HFKSMENTYRLAPEMKHYG-CVVDLLCRSGYLDMA 461
Query: 506 RRVFDRMP 513
+MP
Sbjct: 462 YNFIKKMP 469
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 174/395 (44%), Gaps = 67/395 (16%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L +A +F+++ + W+ MI ++S P +A + M + + F + +
Sbjct: 22 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKS 81
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A + +R G V H +K+G E F+SNALI +Y GE + VFD ++E+D V
Sbjct: 82 CARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERD---V 138
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWNS+I GY + +F V +F EM
Sbjct: 139 VSWNSII-------------------------------CGYYQFNRFKKVLDLFREMQAI 167
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
+ T + A+ ++ E G L I + G D++LG L D Y + G I+ +
Sbjct: 168 NVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFA 227
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESG----------------------------YAK--- 534
RVF +M +KN +SW M+ G A+ G AK
Sbjct: 228 GRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHA 287
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++ LF+EM + + P+E+T+ + L AC+H G +D G + + ++IK + +
Sbjct: 288 EAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDIKSDVFVGNSL 346
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+DM + G + +A N M DS +W S++SG
Sbjct: 347 IDMYCKCGVVEKALQVFNDMKTR-DSVSWTSIISG 380
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 166/385 (43%), Gaps = 58/385 (15%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE-ANEIVKDLNGFDLVVHNCMINANI 98
G L ++ + G+ + YL L+ MY G R ++ A + + ++V N MI
Sbjct: 192 GDYLVKYIDEHGVVVDLYLGNTLIDMY-GRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYA 250
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGF---MKHGRVEESMWYFERNPFQNVISWTAA 155
+ GNL A++LF+ MP R+ +SWT++I G+ +H
Sbjct: 251 KVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHA----------------------- 287
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
EA+KLF +++ S VKP+E+T ++ ACA + G +V I K
Sbjct: 288 -----------EAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDI 336
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ V V NSLI + K G V+ A VF+ M+ RD VSWT I+ G A +FD+
Sbjct: 337 KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQ 396
Query: 276 MPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLK 330
M + ++ ++ G ++ F+ M Y P + V+ L
Sbjct: 397 MLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLC--- 453
Query: 331 ALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
RSG A+ + K+ I DV I L+ S C G LV IV K + +
Sbjct: 454 --RSGYLDMAYNFIKKMPIVPDVVIWRILL---SAC--KLHGNLVLAEIVSKKLLVLDPS 506
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPK 413
N+ G Y L+ + +D++ K
Sbjct: 507 NN--GNYVLSSSTYAGSDRWDDVIK 529
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 121/259 (46%), Gaps = 9/259 (3%)
Query: 387 SWNSMIGGYGLNGQ-MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
S + +I Y L+ Q + +A +F+ + + + W+ +I G + + + +N M
Sbjct: 7 SISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYK 66
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + TF + + A V+ + +G+ + +KLGF F+ AL Y G++ +
Sbjct: 67 GIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMA 126
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC--- 562
++VFD M +++ +SW ++ G + K+ ++LF EM+ ++ + +T++ + A
Sbjct: 127 QKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFL 186
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
S + D +KY + + ++ ++DM R G + A M E + +
Sbjct: 187 SEWEMGDYLVKYIDEHGVVVDLYLG----NTLIDMYGRRGMIDFAGRVFYQMK-EKNIVS 241
Query: 623 WASLLSGCKTYKNEQIAER 641
W +++ G N A++
Sbjct: 242 WNAMIMGYAKVGNLVAAKK 260
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 20/256 (7%)
Query: 29 KDITSQNLVIQGRALHGHLIKTG------IHKERYLTTRLLIMYLGSRKSLEA----NEI 78
K+I S N +I G A G+L+ ++ T ++I Y +++ EA E+
Sbjct: 237 KNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEM 296
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS----WTALISGFMKHGRV 134
+ + D + ++A G+L+ + + D + + + S +LI + K G V
Sbjct: 297 MVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVV 356
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
E+++ F ++ +SWT+ I G NGF+ AL +F ++L+ G+ P TF + AC
Sbjct: 357 EKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLAC 416
Query: 195 AEINDFRLGLSVFGLI---FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDV 250
A + G+ F + ++ E C ++ L + G +D+A + +M DV
Sbjct: 417 AHVGLVDKGVEHFKSMENTYRLAPEMKHYGC--VVDLLCRSGYLDMAYNFIKKMPIVPDV 474
Query: 251 VSWTVILDVFIEMGDL 266
V W ++L G+L
Sbjct: 475 VIWRILLSACKLHGNL 490
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 303/544 (55%), Gaps = 31/544 (5%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
FSS+ C + G ++ + K + N LI L K G + FD +
Sbjct: 81 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 140
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ +W +L + + G +A ++FDEMP+RN VS++ +I+ + + +EA + FR+
Sbjct: 141 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 200
Query: 307 M------------TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
M T S N SC L ++K LR VH +G ++ ++
Sbjct: 201 MQNGVGGLMLDEFTLVSLVSNCSC-------LDTVKWLR---QVHGVATIVGFRTNLILN 250
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NALID Y KCGE +F S+VEKD VSW SM+ Y ++++A ++F+ MP +
Sbjct: 251 NALIDAYGKCGEPNSSFCLFRSMVEKDA---VSWTSMVVTYTRASRIDDACKVFNEMPVK 307
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
VSW+A+ISG++++ + VF++M+ G +P TF SVL A AS A + +GK +H
Sbjct: 308 YTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVH 367
Query: 475 GKIIKLGFP---YDVFLGTALTDTYAKSGDIESSRRVFDRMPD-KNEISWTVMVRGLAES 530
+II+ ++V++ AL D YAK GD++S+ +F+ M K+ +SW ++ G A++
Sbjct: 368 CQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQN 427
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G ++S+ +F+ M +++I PN +T L VL AC+H+GLV+ GL+ +SME Y +KP H
Sbjct: 428 GRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNH 487
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSN--AWASLLSGCKTYKNEQIAERAVKNLWK 648
Y ++D+L R RL EA I +P E ++ W ++L GC+ + N ++A +A + L+
Sbjct: 488 YALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFA 547
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
L E+ YV+LSNIYA++GRW D +R +M E+GL+K S +E++ H F K
Sbjct: 548 LEPENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDK 607
Query: 709 HNPK 712
+P+
Sbjct: 608 FHPQ 611
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 155/610 (25%), Positives = 269/610 (44%), Gaps = 116/610 (19%)
Query: 17 FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY--LGSRKSLE 74
F+S IE L+ + S + G+ALH LIKT + E +L L+ +Y G ++S+
Sbjct: 74 FSSTIEKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESI- 132
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
++ DL N +++ + G +A +LFD MP+RN VS+ +LISG +H
Sbjct: 133 -HKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFH 191
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+E++ +F +QNG G+ +E T S+ C
Sbjct: 192 KEAVKFFRE----------------MQNGV-------------GGLMLDEFTLVSLVSNC 222
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ ++ + V G+ GF ++ + N+LI K GE + + +F M ++D VSWT
Sbjct: 223 SCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWT 282
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++ + + +A ++F+EMP + VSW+ +I+ + ++G EA +F QM + P
Sbjct: 283 SMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLP 342
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD----VFISNALIDLYSKCGETKDG 370
F VL A AS + G VH +++ G D V++ NAL+D+Y+KCG+ K
Sbjct: 343 RAQTFVSVLDACASEALIGRGKQVHCQIIR-GRSSDNLFNVYVFNALMDMYAKCGDMKSA 401
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+F+ ++ V VVSWN++I G+ NG+ E++
Sbjct: 402 ENLFEMMIH--VKDVVSWNTLITGFAQNGRGEDS-------------------------- 433
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
AVF+ M+ S PN TF VL A + G +L
Sbjct: 434 -----LAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLEL----------------- 471
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
++S R + P N + +++ L +E++ L E++ P
Sbjct: 472 -----------LDSMERRYGVKPKSNH--YALLIDLLGRKNRLEEAMCLIEKV------P 512
Query: 551 NELTIL-----SVLFACSHSGLVDKGLKYFNSMEPIYNIKP-NGRHYTCVVDMLSRSGRL 604
NE++ +VL C G ++ K + E ++ ++P N Y + ++ + SGR
Sbjct: 513 NEISNHIAMWGAVLGGCRVHGNLELARK---AAEALFALEPENTGRYVMLSNIYAASGRW 569
Query: 605 SEAEDFINSM 614
S+ N M
Sbjct: 570 SDTNRIRNVM 579
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE-RNEVSWTALISGFMKHGRVEESMWYF 141
N F++ V N +++ + G+++ A+ LF+ M ++ VSW LI+GF ++GR E+S+ F
Sbjct: 378 NLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVF 437
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-----GVKPNEVTFSSICKACAE 196
+R N+ G + + L+LL+S GVKP ++ +
Sbjct: 438 DRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGR 497
Query: 197 INDFRLGLSVFGLIFKAGFE--KHVSVCNSLITLSLKMGEVDLARSVFD---RMEKRDVV 251
N + LI K E H+++ +++ G ++LAR + +E +
Sbjct: 498 KNRLEEAMC---LIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTG 554
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPER 279
+ ++ +++ G + RI + M ER
Sbjct: 555 RYVMLSNIYAASGRWSDTNRIRNVMKER 582
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 290/583 (49%), Gaps = 66/583 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TAL+ + K G + E+ F ++V++W A I G G +A++L +++ E G+
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN T + E G ++ G + F+
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDN------------------------ 243
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
VV T +LD++ + L AR+IFD M RNEVSWS MI Y S +EA
Sbjct: 244 -------GVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEAL 296
Query: 302 RLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF QM + + P VL A A L L G +H +++K+G D+ + N L+ +
Sbjct: 297 ELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSM 356
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG D A FD M ++ VS+S
Sbjct: 357 YAKCGVIDD----------------------------------AIRFFDEMNPKDSVSFS 382
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
AI+SG +++ + ++F M LSG P+ +T VL A + +A+L+ G HG +I
Sbjct: 383 AIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR 442
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF D + AL D Y+K G I +R VF+RM + +SW M+ G G E++ LF
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
++ + P+++T + +L +CSHSGLV +G +F++M ++I P H C+VD+L R
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR 562
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G + EA FI +MPFEPD W++LLS C+ +KN ++ E K + L E +VLL
Sbjct: 563 AGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLL 622
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
SNIY++AGRW DA ++R + GL+K GCSW+E+ VH F
Sbjct: 623 SNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAF 665
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 246/541 (45%), Gaps = 70/541 (12%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISG----FMKHGRVEESMWYFERNPFQN 148
++ A IQ +L EA+++ + + ++++ ++ +V + F+ P +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
VI W I + NG A+ L+ +L GV+PN+ T+ + KAC+ + G+ +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
G E V VC +L+ D + + G L E
Sbjct: 134 HAKMFGLESDVFVCTALV-------------------------------DFYAKCGILVE 162
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A+R+F M R+ V+W+ MIA + G ++A +L QM PN+S VL +
Sbjct: 163 AQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGE 222
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
KAL G +H + ++ + V + L+D+Y+KC R +FD + V + VSW
Sbjct: 223 AKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVM---GVRNEVSW 279
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++MIGGY + M+EA ELFD M ++ +
Sbjct: 280 SAMIGGYVASDCMKEALELFDQMILKDAMD------------------------------ 309
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P T SVL A A + L +G+ LH IIKLG D+ LG L YAK G I+ + R
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M K+ +S++ +V G ++G A ++++F M+ + I P+ T+L VL ACSH +
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
G + + + ++DM S+ G++S A + N M D +W +++
Sbjct: 430 QHGFCSHGYL-IVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMII 487
Query: 629 G 629
G
Sbjct: 488 G 488
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 182/375 (48%), Gaps = 43/375 (11%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARR+FDE+P + + W+ +I Y +G + A L+ M +PN + VL A +
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L A+ G+ +H+H G+E DVF+ AL+D Y+KCG
Sbjct: 122 LLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG----------------------- 158
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+ EA+ LF +M R+ V+W+A+I+G + D + +M G
Sbjct: 159 -----------ILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN ST VL +L GK LHG ++ F V +GT L D YAK + +R++
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGL 567
FD M +NE+SW+ M+ G S KE++ LF++M K ++ P +T+ SVL AC+
Sbjct: 268 FDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTD 327
Query: 568 VDKGLK---YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+ +G K Y + + +I ++ M ++ G + +A F + M DS +++
Sbjct: 328 LSRGRKLHCYIIKLGSVLDILLGNT----LLSMYAKCGVIDDAIRFFDEMN-PKDSVSFS 382
Query: 625 SLLSGCKTYKNEQIA 639
+++SGC N +A
Sbjct: 383 AIVSGCVQNGNAAVA 397
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 173/444 (38%), Gaps = 119/444 (26%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
G+ALHG+ ++ + T LL MY + L A +I + + V + MI +
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 99 QWGNLEEAQRLFDGMPERNEVSWT------------------------------------ 122
++EA LFD M ++ + T
Sbjct: 288 ASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDI 347
Query: 123 ----ALISGFMKHGRVEESMWYF-ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
L+S + K G +++++ +F E NP ++ +S++A + G VQNG + AL +F +
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDEMNP-KDSVSFSAIVSGCVQNGNAAVALSIFRMMQL 406
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
SG+ P+ T + AC+ + + G G + GF +CN+LI + K G++
Sbjct: 407 SGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISF 466
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR VF+RM++ D+ VSW+ MI Y G
Sbjct: 467 AREVFNRMDRHDI-------------------------------VSWNAMIIGYGIHGLG 495
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EA LF + KP+ F +LS+
Sbjct: 496 MEALGLFHDLLALGLKPDDITFICLLSSC------------------------------- 524
Query: 358 IDLYSKCGETKDGRLVFD------SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
S G +GRL FD SIV + + H + ++G GL ++EA NM
Sbjct: 525 ----SHSGLVMEGRLWFDAMSRDFSIVPR-MEHCICMVDILGRAGL---IDEAHHFIRNM 576
Query: 412 PKRNDVS-WSAIISGYLEHKQFDL 434
P DV WSA++S HK +L
Sbjct: 577 PFEPDVRIWSALLSACRIHKNIEL 600
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
K+ + +L A SL + K +H +K D + LT Y + +RR+FD
Sbjct: 8 KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+P+ + I W ++R A +G +I+L+ M + PN+ T VL ACS ++
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G++ +S ++ ++ + T +VD ++ G L EA+ +SM D AW ++++GC
Sbjct: 128 GVE-IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185
Query: 631 KTYKNEQIAERAVKNLWKLAEE 652
Y + + AV+ + ++ EE
Sbjct: 186 SLYG---LCDDAVQLIMQMQEE 204
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 162/403 (40%), Gaps = 65/403 (16%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+GR LH ++IK G + L LL MY +A ++N D V + +++ +
Sbjct: 330 RGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCV 389
Query: 99 QWGNLEEAQRLFDGM------PE---------------------------------RNEV 119
Q GN A +F M P+ + +
Sbjct: 390 QNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
ALI + K G++ + F R +++SW A I G+ +G EAL LF LL G
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV------CNSLITLSLKMG 233
+KP+++TF + +C+ GL + G ++ + S+ C ++ + + G
Sbjct: 510 LKPDDITFICLLSSCSHS-----GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAG 564
Query: 234 EVDLARSVFDRME-KRDVVSWTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVM 287
+D A M + DV W+ +L IE+G+ E + + + ++ ++
Sbjct: 565 LIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGE--EVSKKIQSLGPESTGNFVLL 622
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
Y+ +G ++A + + K C I ++ + + A G H + +I
Sbjct: 623 SNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGI--VHAFVGGDQSHLQLSQINR 680
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+ + L+++ + G + VF + E++ ++ ++S
Sbjct: 681 K----LEELLVEM-KRLGYQAECSFVFQDVEEEEKEQILLYHS 718
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 275/511 (53%), Gaps = 15/511 (2%)
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK--RDVVSWTVILDVFIEMGDLGEAR 270
+G + V +SL+ L++G AR++FD M + R VV W+ ++ GD A
Sbjct: 46 SGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAW 105
Query: 271 RIFDEMP-----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSCFSIVLS 324
R+ +EM E N ++W+ +++ N+SG +A M +P+ + S LS
Sbjct: 106 RLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALS 165
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A+ + + G +H + +K G D + ALID+Y KCG+ + VFD DVA
Sbjct: 166 AVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVA- 224
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFN 440
S N++I G N Q+ EA LF R N VSW++I++ +++ + F
Sbjct: 225 --SCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFR 282
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM G PN T VL A A+VA+L G+ H ++ GF +DV++ +AL D YAK G
Sbjct: 283 EMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCG 342
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
++ +R +FD M +N +SW M+ G A G A ++ +F M K P+ +T +L
Sbjct: 343 RVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLA 402
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
AC+ +GL ++G YF M Y + P HY C+V +L R+G+L EA D I+ MPFEPD+
Sbjct: 403 ACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDA 462
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W SLL C+ + N +AE A + L+ L E+ YVLLSNIYAS W VR++M
Sbjct: 463 YIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMM 522
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ GL+K GCSW+E++N+VH D +P
Sbjct: 523 KDVGLKKEKGCSWIEIKNKVHMLLAGDDSHP 553
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 218/459 (47%), Gaps = 29/459 (6%)
Query: 79 VKDLNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMP--ERNEVSWTALISGFMKHGRV 134
V +++G D V + +++A ++ G A+ LFDGMP +R V W+AL++ G
Sbjct: 42 VAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDA 101
Query: 135 EESMWYFER-----NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFS 188
E + E NVI+W + G ++G + +A+ + G+ +P+ S
Sbjct: 102 EGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVS 161
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
A ++ +G + G KAG V +LI + K G+ VFD
Sbjct: 162 CALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHM 221
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLF 304
DV S ++ + EA R+F E +R N VSW+ ++A Q+G EA F
Sbjct: 222 DVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFF 281
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
R+M +PN+ VL A A++ AL G H L+ G DV++S+AL+D+Y+KC
Sbjct: 282 REMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKC 341
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWS 420
G KD R++FD++V ++ VVSWN+MIGGY + G+ A +F +M K + V+++
Sbjct: 342 GRVKDARIIFDTMVSRN---VVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFT 398
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+++ + + F EM G P ++ ++ L++ DL I
Sbjct: 399 CLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDL---ISD 455
Query: 480 LGFPYDVFLGTALTDTYAKSGDIE----SSRRVFDRMPD 514
+ F D ++ +L + G+++ ++ ++F P+
Sbjct: 456 MPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPE 494
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 150/342 (43%), Gaps = 43/342 (12%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C L + LV G+ LHG+ +K G + + T L+ MY K +A E+V
Sbjct: 162 CALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMY---GKCGQAAEVV------ 212
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF---- 141
R+FD + S ALI+G ++ +V E++ F
Sbjct: 213 ----------------------RVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFV 250
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+R NV+SWT+ + VQNG EA++ F ++ G +PN VT + A A +
Sbjct: 251 DRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALM 310
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G S + GF V V ++L+ + K G V AR +FD M R+VVSW ++ +
Sbjct: 311 HGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYA 370
Query: 262 EMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNT 316
G+ A +F M + + V+++ ++A Q+G EE F++M Y P
Sbjct: 371 MYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRM 430
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
++ +++ L L + + + E D +I +L+
Sbjct: 431 EHYACMVTLLGRAGKLDEAYDL---ISDMPFEPDAYIWGSLL 469
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 23/343 (6%)
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
SF P+ + +L R+ +HA G+ +D F++++L+ Y + G T +
Sbjct: 15 SFPPDPHLLPTAFKSCPTLPLARA---LHAVAEVSGLARDPFVASSLLHAYLRLGTTGNA 71
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK-----RNDVSWSAIISG 425
R +FD + + VV W++++ + G E A L + M + N ++W+ ++SG
Sbjct: 72 RALFDGM-PRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSG 130
Query: 426 Y-LEHKQFDLVFAV---FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ D V A+ E LL P+ + S L A V + G+ LHG +K G
Sbjct: 131 LNRSGRARDAVVALATMHGEGLLR---PDATGVSCALSAVGDVGLVSVGQQLHGYAVKAG 187
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D + TAL D Y K G RVFD + S ++ GL+ + E++ LF+
Sbjct: 188 CRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFK 247
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
E + N ++ S++ C +G + +++F M+ +PN CV+ +
Sbjct: 248 EFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQA-QGTEPNSVTIPCVLPAFANV 306
Query: 602 GRL---SEAEDFINSMPFEPD---SNAWASLLSGCKTYKNEQI 638
L A F F D S+A + + C K+ +I
Sbjct: 307 AALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARI 349
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C+L + ++ GR+ H ++ G + Y+++ L+ MY
Sbjct: 295 TIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMY---------------- 338
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF- 141
+ G +++A+ +FD M RN VSW A+I G+ +G ++W F
Sbjct: 339 ---------------AKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFH 383
Query: 142 -----ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACA 195
++ P +++++T + Q G + E F ++ E GV P ++ +
Sbjct: 384 SMLKCKQKP--DMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLG 441
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+ LI FE + SL+ G VDLA +++
Sbjct: 442 RAGKLD---EAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKL 488
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 302/609 (49%), Gaps = 68/609 (11%)
Query: 104 EEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
E+ QR PE E S ++ + K G + ++ F+ +N++SW I + +NG
Sbjct: 34 EQMQRTVKNPPEFLENS---VLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENG 90
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ +F +LE KPN T+ ++ + +G + ++G + SV
Sbjct: 91 VFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVN- 149
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
T I +++++ G L A +F++M E+N V+
Sbjct: 150 ------------------------------TAISNMYVKCGWLEGAELVFEKMSEKNAVA 179
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W+ ++ Y Q+ +A LF +M + + FSIVL A A L+ L G +H H++
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV 239
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
K+G+E +V + L+D Y KC +E
Sbjct: 240 KLGLESEVSVGTPLVDFYVKCS----------------------------------NLES 265
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A + F+ + + NDVSWSA+I+GY + +F+ F + N T++S+ A ++
Sbjct: 266 ATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSA 325
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
+A G H IK +A+ Y++ G ++ + RVF+ + D + ++WT +
Sbjct: 326 LADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAI 385
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ G A G A E++ LF M+ + PN +T ++VL ACSHSGLV +G +Y SM Y
Sbjct: 386 IAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYG 445
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ HY C+VD+ SR+G L EA + I SMPF PD+ +W LL GC TY+N +I E A
Sbjct: 446 VATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAA 505
Query: 644 KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+NL++L E AGY+L+ N+YAS G+W +A NVRK+M E+ LRK CSW+ V+ +VH F
Sbjct: 506 ENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRF 565
Query: 704 FQKTDHNPK 712
H+P+
Sbjct: 566 IVGDKHHPQ 574
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/542 (21%), Positives = 211/542 (38%), Gaps = 106/542 (19%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
CL + + GR H + +T + +L +L MY +A ++ ++
Sbjct: 15 CLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRER 74
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPE------------------------------ 115
+LV N +I+A + G ++ +F M E
Sbjct: 75 NLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIH 134
Query: 116 ---------RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
N TA+ + ++K G +E + FE+ +N ++WT + G+ Q
Sbjct: 135 SHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQM 194
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+AL LF K++ GV+ +E FS + KACA + + G + G I K G E VSV L+
Sbjct: 195 DALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLV 254
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+K ++ A F+ + + + VSW+ ++ + +MG+
Sbjct: 255 DFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEF-------------------- 294
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
EEA + F + S N+ ++ + A ++L SG HA +K
Sbjct: 295 -----------EEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSS 343
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ +A+I +YS+CG VF+SI + D V+W ++I GY G EA +
Sbjct: 344 LVAYQHGESAMITMYSRCGRLDYATRVFESIDDPD---AVAWTAIIAGYAYQGNAPEALK 400
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
LF M G PN TF +VL A +
Sbjct: 401 LFRRMQD-------------------------------CGVRPNAVTFIAVLTACSHSGL 429
Query: 467 LEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ +G+ L G + + D Y+++G ++ + + MP + +SW ++
Sbjct: 430 VIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489
Query: 525 RG 526
G
Sbjct: 490 GG 491
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 360 LYSKCGETK---DGRLVFDSIVEKDVAHVVSW--NSMIGGYGLNGQMEEAKELFDNMPKR 414
L+ CG+ K DGRL F +++ V + + NS++ Y G + +A+++FD M +R
Sbjct: 16 LFEACGKIKSLFDGRL-FHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRER 74
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
N VSW+ IIS Y E+ FD F +F+ ML PN ST+ L + + + LE GK +H
Sbjct: 75 NLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIH 134
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
I+ G + + TA+++ Y K G +E + VF++M +KN ++WT ++ G ++
Sbjct: 135 SHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQM 194
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY------NIKPNG 588
+++ LF +M + +E VL AC+ GL+ N I+ ++
Sbjct: 195 DALALFAKMVNEGVELDEYVFSIVLKACA-------GLEELNFGRQIHGHIVKLGLESEV 247
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T +VD + L A + EP+ +W++L++G
Sbjct: 248 SVGTPLVDFYVKCSNLESATKAFEWIS-EPNDVSWSALITG 287
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 208/672 (30%), Positives = 334/672 (49%), Gaps = 98/672 (14%)
Query: 107 QRLFDG-MPERNEVSWTALISGFMKHGRVEESMWYFE-RNPFQNVISWTAAICGFVQNGF 164
+RL G + +R+ V +L++ + + G V + F+ ++++SWTA +NG
Sbjct: 72 RRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGA 131
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
+L L ++LESG+ PN T + AC E + V
Sbjct: 132 ERGSLLLIGEMLESGLLPNAYTLCAAAHACFP------------------HELYCLVGGV 173
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
++ L KMG + DV + ++D+ GDL AR++FD + E+ V W
Sbjct: 174 VLGLVHKMG-----------LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVW 222
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+++I+RY Q EEA LF F+P+ S ++SA L ++R G+ +H+ L+
Sbjct: 223 TLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALR 282
Query: 345 IGIEKDVFISNALIDLYSKC--GETKD-GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+G+ D +S L+D+Y+K G+ D VF+ + + DV +SW ++I GY +G
Sbjct: 283 MGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDV---ISWTALISGYVQSGVQ 339
Query: 402 EEA-----KELFDNMPKRNDVSWS-----------------------------------A 421
E E+ + K N +++S A
Sbjct: 340 ENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNA 399
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIP---------------------NKSTFSSVLCA 460
++S Y E + VFN++ IP + STF+S++ A
Sbjct: 400 LVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISA 459
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ASV L KG+ LH +K GF D F+ +L Y++ G +E + R F+ + D+N ISW
Sbjct: 460 AASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISW 519
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T M+ GLA+ GYA+ +++LF +M T + PN++T ++VL ACSH GLV +G +YF SM+
Sbjct: 520 TSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR 579
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+ + P HY C+VD+L+RSG + EA +FIN MP + D+ W +LL C+++ N ++ E
Sbjct: 580 DHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGE 639
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
KN+ +L PA YVLLSN+YA AG W + +R M + L K G SW+EV N
Sbjct: 640 ITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTT 699
Query: 701 HFFFQKTDHNPK 712
H F +P+
Sbjct: 700 HEFRAGDTSHPR 711
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 218/513 (42%), Gaps = 143/513 (27%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G D+ V + +I+ + G+L A+++FDG+ E+ V WT LIS
Sbjct: 185 GTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLIS----------------- 227
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+VQ + EA++LFL LE G +P+ T SS+ AC E+ RLG
Sbjct: 228 --------------RYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLG 273
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLK--MGE-VDLARSVFDRMEKRDVVSWTVILDVF 260
L + L + G V L+ + K +G+ +D A VF+RM K DV+SWT ++ +
Sbjct: 274 LQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGY 333
Query: 261 IEMG------------------------------------DLGEARRIFDEMPERNEVS- 283
++ G D R++ + + N+ S
Sbjct: 334 VQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASA 393
Query: 284 ---WSVMIARYNQSGYPEEAFRLFRQMTRYSFKP---------------------NTSCF 319
+ +++ Y +SG EEA R+F Q+ S P ++S F
Sbjct: 394 HTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTF 453
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ ++SA AS+ L G +HA LK G D F+SN+L+ +YS+CG +D F+ + +
Sbjct: 454 ASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKD 513
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
++ V+SW SMI G +G E A LF
Sbjct: 514 RN---VISWTSMISGLAKHGYAERALSLF------------------------------- 539
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL-------HGKIIKLGFPYDVFLGTAL 492
++M+L+G PN T+ +VL A + V + +GK+ HG I ++ +
Sbjct: 540 HDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHY------ACM 593
Query: 493 TDTYAKSGDIESSRRVFDRMPDK-NEISWTVMV 524
D A+SG ++ + + MP K + + W ++
Sbjct: 594 VDLLARSGIVKEALEFINEMPLKADALVWKTLL 626
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 177/400 (44%), Gaps = 59/400 (14%)
Query: 233 GEVDLARSVFDRMEK-----RDVVSWTVILDVFIEMGDLGEARRIFDEMPE-RNEVSWSV 286
G++ L R++ R+ + RD V +L ++ G + AR +FD M R+ VSW+
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA---LRSGMHVHAHVL 343
M + ++G + L +M PN +++ +A A G V V
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNA--YTLCAAAHACFPHELYCLVGGVVLGLVH 179
Query: 344 KIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
K+G+ DV + +ALID+ ++ G+ R VFD ++EK VV W +I Y E
Sbjct: 180 KMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKT---VVVWTLLISRYVQGECAE 236
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
EA ELF + +LE G P++ T SS++ A
Sbjct: 237 EAVELFLD---------------FLE----------------DGFEPDRYTMSSMISACT 265
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG---DIESSRRVFDRMPDKNEIS 519
+ S+ G LH +++G D + L D YAKS ++ + +VF+RMP + IS
Sbjct: 266 ELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVIS 325
Query: 520 WTVMVRGLAESGYAKESI-NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
WT ++ G +SG + + LF EM SI PN +T S+L +C+ D G +
Sbjct: 326 WTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVH--- 382
Query: 579 EPIYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSM 614
+ IK N V V M + SG + EA N +
Sbjct: 383 --AHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQL 420
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 71/288 (24%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L+ S ++ +G+ LH +K G +R+++ L+ MY
Sbjct: 456 LISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMY-------------------- 495
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G LE+A R F+ + +RN +SWT++ISG KHG Y ER
Sbjct: 496 -----------SRCGYLEDACRSFNELKDRNVISWTSMISGLAKHG-------YAER--- 534
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
AL LF ++ +GVKPN+VT+ ++ AC+ + R G
Sbjct: 535 ---------------------ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEY 573
Query: 207 F-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF---- 260
F + G + ++ L + G V A + M K D + W +L
Sbjct: 574 FRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHD 633
Query: 261 -IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
IE+G++ A+ + E+ R+ + ++ Y +G +E R+ M
Sbjct: 634 NIEVGEI-TAKNVV-ELEPRDPAPYVLLSNLYADAGLWDEVARIRSAM 679
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 212/693 (30%), Positives = 340/693 (49%), Gaps = 73/693 (10%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI----VKDL 82
L++ S L + L ++ +GI ++Y L + SR +I +K
Sbjct: 104 LIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMD 163
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
DL V N +++ + G L+ A+++FD M ERN
Sbjct: 164 YAKDLFVQNSLVHFYAECGELDCARKVFDEMSERN------------------------- 198
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFR 201
V+SWT+ ICG+ + F+ +A+ LF +++ + V PN VT + ACA++ D
Sbjct: 199 ------VVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLE 252
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V+ I +G E + + ++L+ + +K +D+A+
Sbjct: 253 TGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAK---------------------- 290
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
R+FDE N + M + Y + G +EA + M +P+
Sbjct: 291 ---------RLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLS 341
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+S+ + L+ + G H +VL+ G E I NALID+Y KC +FD + K
Sbjct: 342 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 401
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V V+WNS++ GY NG+++ A E F+ MP++N VSW+ IIS ++ ++ VF+
Sbjct: 402 V---VTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHY 458
Query: 442 MLLSGEIPNKS--TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M S E N T S+ A + +L+ K ++ I K DV LGT L D +++
Sbjct: 459 MQ-SQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRC 517
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
GD ES+ +F+ + +++ +WT + +A +G + +I LF EM + + P+ + + L
Sbjct: 518 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGAL 577
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
AC H GLV +G + FNSME ++ + P HY C+VD+L R+G L EA I MP EP+
Sbjct: 578 TACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPN 637
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
W SLL+ C+ N ++A A + + LA E YVLLSN+YASAGRW D VR
Sbjct: 638 DVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 697
Query: 680 MTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
M EKGLRK G S +++R + H F + +P+
Sbjct: 698 MKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPE 730
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 3/222 (1%)
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLEHKQFDLVF 436
++ DV+ + + G + AKE+F+N ++++I GY
Sbjct: 59 LDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAI 118
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F M+ SG P+K TF L A G +HG IIK+ + D+F+ +L Y
Sbjct: 119 LLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFY 178
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTI 555
A+ G+++ +R+VFD M ++N +SWT M+ G A +AK++++LF M + + PN +T+
Sbjct: 179 AECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTM 238
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
+ V+ AC+ ++ G K ++ + I+ N + +VDM
Sbjct: 239 VCVISACAKLEDLETGEKVYDFIRD-SGIEVNDLMISALVDM 279
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 182/432 (42%), Gaps = 61/432 (14%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +C++ + G ++ + +GI + + L+ MY+ A + +
Sbjct: 237 TMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEY 296
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PERNEV----------------- 119
+L + N M + ++ G +EA + + M P+R +
Sbjct: 297 GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGK 356
Query: 120 ------------SW----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
SW ALI +MK R + + F+R + V++W + + G+++NG
Sbjct: 357 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENG 416
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
A + F + E + V++++I A + N + + VF + ++ V+V +
Sbjct: 417 EVDAAWETFNTMPEKNI----VSWNTIISALVQENMYEEAIEVFHYMQS---QECVNV-D 468
Query: 224 SLITLSLK-----MGEVDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFD 274
+ +S+ +G +DLA+ ++ +EK DV T ++D+F GD A IF+
Sbjct: 469 GVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFN 528
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+ R+ +W+ I +G E A LF +M KP+ F L+A ++
Sbjct: 529 SLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQ 588
Query: 335 GMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMI 392
G + + K+ G+ + ++DL + G ++ +L+ D E + V WNS++
Sbjct: 589 GKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPN---DVIWNSLL 645
Query: 393 GGYGLNGQMEEA 404
+ G +E A
Sbjct: 646 AACRVQGNVEMA 657
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 299/582 (51%), Gaps = 38/582 (6%)
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
S+ AL +G G V + F+R P + + + I + + EAL L ++ G
Sbjct: 50 SYCALPAG----GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRG 105
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ PNE T + KACA + + + G++ K GF V V N+L
Sbjct: 106 ILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNAL-------------- 151
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
L + G LG++RR FDEM +RN VSW+ MI Y Q+G E
Sbjct: 152 -----------------LHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTRE 194
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A LF M R + +L A ++ L G VH+H+L G D+ ++NAL+D
Sbjct: 195 ACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVD 254
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y KCG+ FD + K+ VSW SM+ ++ A++ F+ +P+++ +SW
Sbjct: 255 MYGKCGDLLMAHTCFDMMPFKNA---VSWTSMLCALAKRASIDAARDWFEQIPEKSIISW 311
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+A+IS Y++ +F ++N M L G P++ T ++VL A + L GK +H I
Sbjct: 312 NAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRD 371
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
V L +L D YA+ G ++++ +F MP KN ISW ++ LA G A++++
Sbjct: 372 NFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMF 431
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F M + P+E+T +++L AC+H GL++ G YF +M +YN+KP HY C+VD+L
Sbjct: 432 FRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLG 491
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R G+L++A D I MP PD W +LL C+ + + QI ++ +K L +L +VL
Sbjct: 492 RGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVL 551
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
+SN+ +W D +RKLM E G++K+ G S +E + +H
Sbjct: 552 ISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIH 593
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 203/447 (45%), Gaps = 54/447 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N ++++ G+L +++R FD M +RN VSW ++I+G
Sbjct: 147 VGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMING--------------------- 185
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+ Q G + EA LF + G+ +E T S+ AC+ + G V
Sbjct: 186 ----------YAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHS 235
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ G + + N+L+ + K G++ +A + FD M ++ VSWT +L + +
Sbjct: 236 HLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDA 295
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR F+++PE++ +SW+ MI+ Y Q G EA L+ +M P+ + VLSA
Sbjct: 296 ARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQ 355
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L L SG +H + V + N+L+D+Y++CG+ +F + K+ V+SW
Sbjct: 356 LGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKN---VISW 412
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIIS-----GYLEHKQ--FDLVFA 437
N++IG ++G+ ++A F +M +++++ A++S G LE Q F +
Sbjct: 413 NAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRH 472
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
V+N P ++ ++ L K DL I + DV + AL
Sbjct: 473 VYNVK------PGVEHYACMVDLLGRGGQLAKAVDL---IKDMPMRPDVVVWGALLGACR 523
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMV 524
G I+ ++V ++ + +S + V
Sbjct: 524 IHGHIQIGKQVIKQLLELEGMSGGLFV 550
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 153/333 (45%), Gaps = 44/333 (13%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
DL++ N +++ + G+L A FD MP +N VSWT+++ K ++ + +FE+
Sbjct: 244 IDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQI 303
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +++ISW A I +VQ G EAL L+ ++ G+ P+E T +++ AC ++ D G
Sbjct: 304 PEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGK 363
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I V++ NSL+ + + G+VD A S+F M ++V+SW I
Sbjct: 364 MIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAI-------- 415
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
I G ++A FR M +F P+ F +LS
Sbjct: 416 -----------------------IGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLS 452
Query: 325 ALASLKALRSGMHV-----HAHVLKIGIEKDVFISNALIDLYSKCGE-TKDGRLVFDSIV 378
A L +G + H + +K G+E ++DL + G+ K L+ D +
Sbjct: 453 ACNHGGLLEAGQYYFQAMRHVYNVKPGVEH----YACMVDLLGRGGQLAKAVDLIKDMPM 508
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
D VV W +++G ++G ++ K++ +
Sbjct: 509 RPD---VVVWGALLGACRIHGHIQIGKQVIKQL 538
>gi|147859488|emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 280/496 (56%), Gaps = 18/496 (3%)
Query: 211 FKAGFEKHVSVCNSLITLSLKMGE-VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
FK E CN L G V L ++ +E V S++ +L +A
Sbjct: 272 FKPQRETQALACNQLKESQRAHGRAVKLGTTI---LEPDIVCSYSA-------SKELWDA 321
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
++FDE+P + VS + I + + + EEA F +M + KPN F V+ + +L
Sbjct: 322 CKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSATAL 381
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ L SG +HA +K+G+E +VF+ +A++D Y+K + + F+ E +V VS+
Sbjct: 382 QDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNV---VSYT 438
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
++I GY + ++A LF MP+RN VSW+A+ISGY + + +F ML G +P
Sbjct: 439 TLIRGYLKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXLP 498
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
N+ TF + A A++A+L G+ HG +K +DVF+G +L YAK G +E S VF
Sbjct: 499 NERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVF 558
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+ +P KN +SW ++ G A G E+I FE+M+ T + PN +T+L +L AC+HSGLVD
Sbjct: 559 NTLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHSGLVD 618
Query: 570 KGLKYFNS--MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
KG YFN +E + P H+ C+VD+LSRSGR EAE F++ +PF P W +LL
Sbjct: 619 KGYSYFNKARVEEPGLLTP--EHHACMVDLLSRSGRFKEAEKFLHELPFVPGIGFWKALL 676
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
GC+ + N ++ E A + + L E + YV+LSN +++AGRW +RK M EK ++
Sbjct: 677 GGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQSVSMIRKEMREKRMKG 736
Query: 688 SGGCSWVEVRNQVHFF 703
G SW+E+R++VH F
Sbjct: 737 VPGSSWIEIRSKVHIF 752
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 150/271 (55%), Gaps = 3/271 (1%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +V+S TA I F + EA+ F ++L +KPN+ +F ++ + + D
Sbjct: 325 FDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVIPSATALQDL 384
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + K G E +V V ++++ K+ ++ A+ F+ + +VVS+T ++ +
Sbjct: 385 NSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIRGY 444
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
++ +A +F MPERN VSW+ MI+ Y+Q GY EEA LF M R PN F
Sbjct: 445 LKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXLPNERTFP 504
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+SA+A++ AL G H +K + DVFI N+L+ Y+KCG ++ LVF+++ +K
Sbjct: 505 CAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLPKK 564
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ +VSWN++I GY +G+ EA F+ M
Sbjct: 565 N---IVSWNALICGYANHGRGMEAIYFFEKM 592
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 5/244 (2%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
L S + L A I L ++ V + +++ + ++ EAQ+ F+ E N VS+T LI
Sbjct: 384 LNSGRQLHACAIKMGLES-NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYTTLIR 442
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G++K R ++++ F P +NV+SW A I G+ Q G++ EA+ LF+ +L G PNE T
Sbjct: 443 GYLKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXLPNERT 502
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F A A I +G S G K + V + NSL++ K G ++ + VF+ +
Sbjct: 503 FPCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYAKCGSMEESLLVFNTLP 562
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFR 302
K+++VSW ++ + G EA F++M + N V+ ++ N SG ++ +
Sbjct: 563 KKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSVTLLGLLLACNHSGLVDKGYS 622
Query: 303 LFRQ 306
F +
Sbjct: 623 YFNK 626
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 314/595 (52%), Gaps = 66/595 (11%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V ++ + + K E+++ F+ P ++V SW I + Q+G +AL+LF ++ S
Sbjct: 142 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 201
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G KP+ VT +++ +CA + D G + + ++GF V ++L+
Sbjct: 202 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALV------------ 249
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
D++ + G L A+ +F+++ +N VSW+ MIA Y+ G +
Sbjct: 250 -------------------DMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSK 290
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
LFR+M +P + S +L A + L+ G +H ++++ +E D+F++++LI
Sbjct: 291 SCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLI 350
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
DLY KCG IG A+ +F NMPK N VS
Sbjct: 351 DLYFKCGN-------------------------IGS---------AENVFQNMPKTNVVS 376
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+ +ISGY++ + +F +M +G P+ TF+SVL A + +A LEKGK++H II
Sbjct: 377 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFII 436
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ + + AL D YAK G ++ + +F+++P+++ +SWT M+ G A E++
Sbjct: 437 ESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALK 496
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LFE+M+++ P+++T L++L ACSH+GLVD+G YFN M Y KP HY+C++D+L
Sbjct: 497 LFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLL 556
Query: 599 SRSGRLSEAEDFINSMP-FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
R GRL EA + + P D ++L S C +K + E+ + L + + P+ Y
Sbjct: 557 GRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTY 616
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++LSN+YAS +W + VR + E GL+K+ GCSW+EV ++H F + +P+
Sbjct: 617 IILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQ 671
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 229/487 (47%), Gaps = 69/487 (14%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRL 202
NP ++ W + +N E L++F +LL +KP+ T+ S+ KAC+ +
Sbjct: 66 NPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGY 124
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V + K+GF V V +S + + K + A +FD M +RDV SW ++ +
Sbjct: 125 GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYY- 183
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
Q G PE+A LF +M FKP++ + V
Sbjct: 184 ------------------------------QDGQPEKALELFEEMKVSGFKPDSVTLTTV 213
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+S+ A L L G +H +++ G D F+S+AL+D+Y KCG + + VF+ I K+
Sbjct: 214 ISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN- 272
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VVSWNSMI GY L G + ELF M +
Sbjct: 273 --VVSWNSMIAGYSLKGDSKSCIELFRRMDEE---------------------------- 302
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G P +T SS+L A + +L+ GK +HG II+ D+F+ ++L D Y K G+I
Sbjct: 303 ---GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
S+ VF MP N +SW VM+ G + G E++ +F +M K + P+ +T SVL AC
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 419
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
S +++KG + N + ++ N ++DM ++ G + EA N +P E D +
Sbjct: 420 SQLAVLEKGKEIHNFIIE-SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVS 477
Query: 623 WASLLSG 629
W S+++
Sbjct: 478 WTSMIAA 484
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 250/580 (43%), Gaps = 112/580 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V G+ +H H+IK+G + + + + MY +A ++ ++ D
Sbjct: 112 VLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERD 171
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALIS---------------- 126
+ N +I+ Q G E+A LF+ M + + V+ T +IS
Sbjct: 172 VASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHM 231
Query: 127 ----------GFM---------KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
GF+ K G +E + FE+ +NV+SW + I G+ G S
Sbjct: 232 ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS 291
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
++LF ++ E G++P T SSI AC+ + +LG + G I + E + V +SLI
Sbjct: 292 CIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLID 351
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
L K G + A +VF M K +VVSW V++ ++++G EA IF +
Sbjct: 352 LYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTD------------ 399
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
M + KP+ F+ VL A + L L G +H +++ +
Sbjct: 400 -------------------MRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 440
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E + + AL+D+Y+KCG + +F+ + E+D VSW SMI YG +GQ EA +L
Sbjct: 441 EINEVVMGALLDMYAKCGAVDEALHIFNQLPERD---FVSWTSMIAAYGSHGQAFEALKL 497
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ M + S P+K TF ++L A + +
Sbjct: 498 FEKMQQ-------------------------------SDAKPDKVTFLAILSACSHAGLV 526
Query: 468 EKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
++G ++I + GF V + L D + G + + + R PD E ++
Sbjct: 527 DEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRED--VGLLST 584
Query: 527 LAESGYAKESINLFEE-----MEKTSITPNELTILSVLFA 561
L + + + ++L E+ +EK P+ ILS ++A
Sbjct: 585 LFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYA 624
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 149/316 (47%), Gaps = 37/316 (11%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
T S++ + + S K L+ G +H ++ +G++ ++ + +LI+LY C + +LVF
Sbjct: 3 TTKLLSLLKTCIDS-KYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+I ++ + WN ++ N E E+F + L
Sbjct: 62 QTI--ENPLDITLWNGLMAACTKNFIFIEGLEVFHRL----------------------L 97
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F P+ T+ SVL A + + + GK +H +IK GF DV + ++
Sbjct: 98 HFPYLK--------PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVG 149
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK E + ++FD MP+++ SW ++ + G ++++ LFEEM+ + P+ +T
Sbjct: 150 MYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVT 209
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYN-IKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
+ +V+ +C+ +++G + ME + + +G + +VDM + G L A++
Sbjct: 210 LTTVISSCARLLDLERGKEI--HMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQ 267
Query: 614 MPFEPDSNAWASLLSG 629
+ + +W S+++G
Sbjct: 268 IQ-RKNVVSWNSMIAG 282
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 310/591 (52%), Gaps = 69/591 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+ +++ GRV ++ F+ ++V +W A + G +N + EA+ LF +++ GV
Sbjct: 109 ALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAG 168
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ VT SS+ C + D L L++ K G + + VCN++I
Sbjct: 169 DAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMI---------------- 212
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
DV+ ++G L E R++FD M R+ V+W+ +I+ + Q G A
Sbjct: 213 ---------------DVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVE 257
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F M G+ DV +L +
Sbjct: 258 MFCGMR-----------------------------------DSGVSPDVLTLLSLASAIA 282
Query: 363 KCGETKDGRLVFDSIVEK--DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+CG+ GR V +V + DV +++ N+++ Y ++E A+ +FD+MP R+ VSW+
Sbjct: 283 QCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWN 342
Query: 421 AIISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+I+GY+++ V++ M G P + TF SVL A + + +L++G +H IK
Sbjct: 343 TLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIK 402
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
G DV++GT + D YAK G ++ + +F++ P ++ W ++ G+ G+ ++++L
Sbjct: 403 TGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSL 462
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F +M++ I+P+ +T +S+L ACSH+GLVD+G +FN M+ Y IKP +HY C+VDM
Sbjct: 463 FSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFG 522
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G+L +A DFI +MP +PDS W +LL C+ + N ++ + A +NL++L ++ YVL
Sbjct: 523 RAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVL 582
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+SN+YA G+W VR L+ + L+K+ G S +EV+ V+ F+ N
Sbjct: 583 MSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMN 633
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 194/391 (49%), Gaps = 42/391 (10%)
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ D + ++ ++ G + +A R FDEM R+ +W+ M++ ++ EA LF +
Sbjct: 101 RGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGR 160
Query: 307 MTRYSFKPNTSCFSIVLSALASL--KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
M + S VL L +AL MH++A +K G++ ++F+ NA+ID+Y K
Sbjct: 161 MVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYA--VKHGLDDELFVCNAMIDVYGKL 218
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G ++ R VFD + +D +V+WNS+I G+ GQ+ A E+F M
Sbjct: 219 GMLEEVRKVFDGMSSRD---LVTWNSIISGHEQGGQVASAVEMFCGMRD----------- 264
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
SG P+ T S+ A A + G+ +H +++ G+
Sbjct: 265 --------------------SGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDV 304
Query: 485 -DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D+ G A+ D YAK IE+++R+FD MP ++ +SW ++ G ++G A E+I++++ M
Sbjct: 305 GDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHM 364
Query: 544 EK-TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
+K + P + T +SVL A SH G + +G + +++ + + TCV+D+ ++ G
Sbjct: 365 QKHEGLKPIQGTFVSVLPAYSHLGALQQGTR-MHALSIKTGLNLDVYVGTCVIDLYAKCG 423
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+L EA P + W +++SG +
Sbjct: 424 KLDEAMLLFEQTP-RRSTGPWNAVISGVGVH 453
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 215/512 (41%), Gaps = 108/512 (21%)
Query: 42 ALHGHLIKTGIHKERYLTTRLLIM--YLGSRKSLEANEIVKDLNGFD--LVVHNCMINAN 97
L G ++ G+ + + +L M LG R A + +G D L V N MI+
Sbjct: 156 GLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVY 215
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
+ G LEE +++FDGM R+ V+W ++ISG + G+V
Sbjct: 216 GKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVA---------------------- 253
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE- 216
A+++F + +SGV P+ +T S+ A A+ D G SV + + G++
Sbjct: 254 ---------SAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDV 304
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ N+++ + K+ +++ A+ +FD M RD VSW ++ +++ G EA ++D M
Sbjct: 305 GDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHM 364
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
+++E KP F VL A + L AL+ G
Sbjct: 365 -QKHE-----------------------------GLKPIQGTFVSVLPAYSHLGALQQGT 394
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+HA +K G+ DV++ +IDLY+KCG+ + L+F+ + WN++I G G
Sbjct: 395 RMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTG---PWNAVISGVG 451
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
++G +A LF M + G P+ TF S
Sbjct: 452 VHGHGAKALSLFSQMQQ-------------------------------EGISPDHVTFVS 480
Query: 457 VLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+L A + +++G++ + G + D + ++G ++ + MP K
Sbjct: 481 LLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIK 540
Query: 516 NEIS-WTVM-----VRGLAESGYAKESINLFE 541
+ + W + + G E G S NLFE
Sbjct: 541 PDSAIWGALLGACRIHGNVEMGKVA-SQNLFE 571
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 145/346 (41%), Gaps = 43/346 (12%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D++ N +++ + +E AQR+FD MP R+ VSW LI+G+M
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYM---------------- 349
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGL 204
QNG + EA+ ++ + + G+KP + TF S+ A + + + G
Sbjct: 350 ---------------QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGT 394
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ L K G V V +I L K G++D A +F++ +R W ++ G
Sbjct: 395 RMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHG 454
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCF 319
+A +F +M + + V++ ++A + +G ++ F M T Y KP +
Sbjct: 455 HGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHY 514
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ ++ L + + I+ D I AL+ G + G++ ++ E
Sbjct: 515 ACMVDMFGRAGQLDDAFDF---IRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFE 571
Query: 380 ---KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
K+V + V ++M G ++E + L + WS+I
Sbjct: 572 LDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 50/341 (14%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL 62
AS +F ++ + + T L L I + GR++H ++++ G +
Sbjct: 253 ASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNA 312
Query: 63 LI-MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS- 120
++ MY K A + + D V N +I +Q G EA ++D M + +
Sbjct: 313 IVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKP 372
Query: 121 ---------------------------------------WTALISGFMKHGRVEESMWYF 141
T +I + K G+++E+M F
Sbjct: 373 IQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLF 432
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
E+ P ++ W A I G +G +AL LF ++ + G+ P+ VTF S+ AC+
Sbjct: 433 EQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVD 492
Query: 202 LGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDV 259
G + F ++ A G + ++ + + G++D A M K D W +L
Sbjct: 493 QGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGA 552
Query: 260 F-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
+EMG + ++ +F E+ +N + +M Y + G
Sbjct: 553 CRIHGNVEMGKVA-SQNLF-ELDPKNVGYYVLMSNMYAKVG 591
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPY-DVFLGTALTDTYAKSGDIESSRRVFDR 511
TF +L A+ + + LH ++LG D F AL Y + G + + R FD
Sbjct: 73 TFPPLLRAAQGPGTAAQ---LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDE 129
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
M ++ +W M+ GL + A E++ LF M + + +T+ SVL C G D+
Sbjct: 130 MRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLG--DRA 187
Query: 572 LKYFNSMEPIYNIKP--NGRHYTC--VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
L +M +Y +K + + C ++D+ + G L E + M D W S++
Sbjct: 188 LAL--AMH-LYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR-DLVTWNSII 243
Query: 628 SG 629
SG
Sbjct: 244 SG 245
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 264/448 (58%), Gaps = 10/448 (2%)
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+IFD + N W+ M+ Y QS E+A L++ M + + P+ + +V+ A A
Sbjct: 84 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 143
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
G +H HVLK+G + DV++ N LI++Y+ CG +D R +FD E V VSWNS
Sbjct: 144 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFD---ESPVLDSVSWNS 200
Query: 391 MIGGY---GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
++ GY G GQ+ EA +LF+ M +++ VSWSA+ISGY ++ ++ +F EM +G
Sbjct: 201 ILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM 260
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL----TDTYAKSGDIE 503
++ SVL A A ++ ++ GK +HG +I++G V L AL +D Y K G +E
Sbjct: 261 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVE 320
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
++ VF+ M +K SW ++ GLA +G + S+++F EM+ + PNE+T + VL AC
Sbjct: 321 NALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACR 380
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H GLVD+G +F SM + I+PN +HY C+VD+L R+G L+EAE I SMP PD W
Sbjct: 381 HMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATW 440
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL CK + + ++ ER + L +L +H +VLLSNI+AS G W D + VR +M ++
Sbjct: 441 GALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQ 500
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
G+ K+ GCS +E VH F +P
Sbjct: 501 GVVKTPGCSLIEANGVVHEFLAGDKTHP 528
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 221/462 (47%), Gaps = 65/462 (14%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR------VEESMWYFE 142
+HNC NL++ R+ M +S T S +K ++ S+ F+
Sbjct: 36 LHNCH--------NLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFD 87
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
R N W + ++Q+ + +AL L+ ++++ V P+ T+ + +ACA RL
Sbjct: 88 RIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA----VRL 143
Query: 203 ----GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + + K GF+ V V N+LI + G + AR +FD D VSW IL
Sbjct: 144 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 203
Query: 259 VFIEMGDLG---EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+++ GD+G EA ++F+EM E++ VSWS +I+ Y Q+G EEA +F +M + +
Sbjct: 204 GYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLD 263
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI----DLYSKCGETKDGR 371
VLSA A L +++G +H V+++GIE V + NALI D+Y KCG ++
Sbjct: 264 EVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENAL 323
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VF+ + EK V+ SWN++I G +NG +E + ++
Sbjct: 324 EVFNGMEEKGVS---SWNALIIGLAVNGLVERSLDM------------------------ 356
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGT 490
F+EM +G IPN+ TF VL A + +++G+ +I K G +V
Sbjct: 357 -------FSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYG 409
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLAESG 531
+ D ++G + + ++ + MP ++ +W ++ + G
Sbjct: 410 CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 451
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 161/326 (49%), Gaps = 43/326 (13%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG---RVEESMWYFE 142
D+ V N +IN GN+ +A++LFD P + VSW ++++G++K G +V E+ F
Sbjct: 163 DVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFN 222
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
++++SW+A I G+ QNG EAL +F+++ +G++ +EV S+ ACA ++ +
Sbjct: 223 EMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKT 282
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLI----TLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + GL+ + G E +V++ N+LI + +K G V+ A VF+ ME++ V SW ++
Sbjct: 283 GKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALI- 341
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+G A +G E + +F +M PN
Sbjct: 342 -------IGLA-----------------------VNGLVERSLDMFSEMKNNGVIPNEIT 371
Query: 319 FSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
F VL A + + G H + + K GIE +V ++DL + G + + +S+
Sbjct: 372 FMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESM 431
Query: 378 -VEKDVAHVVSWNSMIGGYGLNGQME 402
+ DVA +W +++G +G E
Sbjct: 432 PMAPDVA---TWGALLGACKKHGDTE 454
>gi|326504712|dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 658
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/584 (31%), Positives = 306/584 (52%), Gaps = 10/584 (1%)
Query: 106 AQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
A+ LFD +P R+ + L++ + GR++ + P ++ +S+T + + G
Sbjct: 64 ARHLFDEIPLALRDPAAHNTLLASLARAGRLDLAQGMLAEMPQRDTVSYTTVLTALARAG 123
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACA-EINDFRLGLSVFGLIFKAGFEKHVSVC 222
+ +A+ +F +L V PNEVT + + A A E +G++ G+ + G + V
Sbjct: 124 HAEDAVAVFRGMLAQDVPPNEVTLAGVLTALALERPPVPVGVA-HGVTVRRGLNGFLIVA 182
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
+L+ +V AR +F++M ++ V+W +L+ +++ G L A +F +PER+ V
Sbjct: 183 TNLVHAYAAASQVCFAREIFEQMPDKNTVTWNAMLNGYLKAGMLPMAAEVFGRIPERDAV 242
Query: 283 SWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
SW +I Y ++ EA R + M + N + ++ A A+ G +H
Sbjct: 243 SWLTIIDGYIRADCTSEALRAYVAMMAEVDTRGNAALLVDLIKVCARHAAVLEGQQLHTV 302
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+LK G + F+ LI Y C R+ F D +H+ SWN+++ G M
Sbjct: 303 ILKDGFDAHPFVQATLIHFYGSCDLLDIARMQFKL---SDKSHIASWNALMSGLLHRNLM 359
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EA++LFD+MP+R+ +SWS ++SGY++ + +F ML +G PN T +S L A
Sbjct: 360 HEARQLFDDMPERDTISWSTLLSGYVQSGHSNKALQLFYLMLGAGVEPNDVTLASTLSAV 419
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEIS- 519
A LE+G+ +H II L L D YAK G + + ++F + K + +S
Sbjct: 420 ADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDMYAKCGSVADAIQLFSHVKHKLSSVSP 479
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W ++ LA G+A S+ LF E+++T+I PN +T + VL AC H+GLV +G +F SM
Sbjct: 480 WNAIICSLAIHGHAHTSLELFLELQRTNIKPNSVTYIGVLNACCHAGLVTEGRHHFESMS 539
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y I+P +HY C+VD+L R+G L EAE+ I MP D W S+L+ +T+ N +
Sbjct: 540 REYGIQPTIKHYGCMVDLLGRAGHLEEAENLIQMMPMRSDVVIWGSILAAARTHGNVALG 599
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
E+A + L K+ H A V LSNI+A A RW + VRK + ++
Sbjct: 600 EKAAEELAKIDPNHGASKVALSNIFAEAARWNNVSLVRKELQDE 643
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 179/339 (52%), Gaps = 3/339 (0%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+ + LNGF L+V +++A + A+ +F+ MP++N V+W A+++G++K G + +
Sbjct: 171 VRRGLNGF-LIVATNLVHAYAAASQVCFAREIFEQMPDKNTVTWNAMLNGYLKAGMLPMA 229
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAE 196
F R P ++ +SW I G+++ + EAL+ ++ ++ E + N + K CA
Sbjct: 230 AEVFGRIPERDAVSWLTIIDGYIRADCTSEALRAYVAMMAEVDTRGNAALLVDLIKVCAR 289
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
G + +I K GF+ H V +LI +D+AR F +K + SW +
Sbjct: 290 HAAVLEGQQLHTVILKDGFDAHPFVQATLIHFYGSCDLLDIARMQFKLSDKSHIASWNAL 349
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + + EAR++FD+MPER+ +SWS +++ Y QSG+ +A +LF M +PN
Sbjct: 350 MSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGYVQSGHSNKALQLFYLMLGAGVEPND 409
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ LSA+A L G +H +++ I+ +S LID+Y+KCG D +F S
Sbjct: 410 VTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDMYAKCGSVADAIQLF-S 468
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
V+ ++ V WN++I ++G + ELF + + N
Sbjct: 469 HVKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQRTN 507
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 178/440 (40%), Gaps = 110/440 (25%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
+LR+ ++ E + L+K V++G+ LH ++K G ++ L+
Sbjct: 260 ALRAYVAMMAEVDTRGNAALLVDLIKVCARHAAVLEGQQLHTVILKDGFDAHPFVQATLI 319
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
Y DL L+ A+ F + + SW A
Sbjct: 320 HFY----------------GSCDL---------------LDIARMQFKLSDKSHIASWNA 348
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+SG + + E+ F+ P ++ ISW+ + G+VQ+G S +AL+LF +L +GV+PN
Sbjct: 349 LMSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGYVQSGHSNKALQLFYLMLGAGVEPN 408
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL-ITLSLKMGEVDLARSVF 242
+VT +S A A+ G++ + F + NS+ +T +L G
Sbjct: 409 DVTLASTLSAVAD----------SGMLEQGRFIHDYIISNSIQLTDNLSAG--------- 449
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-NEVS-WSVMIARYNQSGYPEEA 300
++D++ + G + +A ++F + + + VS W+ +I G+ +
Sbjct: 450 -------------LIDMYAKCGSVADAIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTS 496
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF ++ R + KPN+ + VL+A HA
Sbjct: 497 LELFLELQRTNIKPNSVTYIGVLNAC-----------CHA-------------------- 525
Query: 361 YSKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
G +GR F+S+ ++ + H + M+ G G +EEA+ L MP R+
Sbjct: 526 ----GLVTEGRHHFESMSREYGIQPTIKH---YGCMVDLLGRAGHLEEAENLIQMMPMRS 578
Query: 416 DVS-WSAIISGYLEHKQFDL 434
DV W +I++ H L
Sbjct: 579 DVVIWGSILAAARTHGNVAL 598
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/400 (41%), Positives = 245/400 (61%), Gaps = 4/400 (1%)
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F+ VL A A L + G VH V K G E ++F+ N+L+DLY K G + +
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FD +V +DV VSWN++I GY +G +++A+ +FD M ++N VSWS +ISGY ++++
Sbjct: 185 FDEMVVRDV---VSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYA 241
Query: 434 LVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+F +M G + PN T SVL A A + +L+ GK +H I + +FLG AL
Sbjct: 242 DAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNAL 301
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK G + ++ VF M +++ ISW++++ GLA GYA E+ N F EM + + PN+
Sbjct: 302 ADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPND 361
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
++ + +L AC+H+GLVDKGL+YF+ M +Y I P HY CVVD+LSR+GRL +AE IN
Sbjct: 362 ISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLIN 421
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
SMP +P+ W +LL GC+ YK+ + ER V + +L H V L+N+YAS GR D
Sbjct: 422 SMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDD 481
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A + R M + K+ GCSW+E+ N V+ FF +P+
Sbjct: 482 AASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQ 521
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 188/402 (46%), Gaps = 40/402 (9%)
Query: 131 HGRVEESMWYFERN-PFQNVISWTAAICGFVQNGFSFEALKLFLK--LLESGVKPNEVTF 187
HG + S+ F F N+ ++ A + F Q+ + F +L + P+E TF
Sbjct: 71 HGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTF 130
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+S+ KACA + G V + K G E ++ V NSL+ L K+G +A+ +FD M
Sbjct: 131 TSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVV 190
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
RDVVSW ++ + G + +AR +FD M E+N VSWS MI+ Y ++ +A LFRQM
Sbjct: 191 RDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQM 250
Query: 308 TRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
PN VLSA A L AL G +H + + IE +F+ NAL D+Y+KCG
Sbjct: 251 QHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGC 310
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ + VF + E+D V+SW+ +I G + G EA
Sbjct: 311 VLEAKGVFHEMHERD---VISWSIIIMGLAMYGYANEA---------------------- 345
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYD 485
F F EM+ G PN +F +L A ++KG + + ++ G
Sbjct: 346 ---------FNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPK 396
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRG 526
+ + D +++G ++ + + + MP N I W ++ G
Sbjct: 397 IEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 438
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 149/311 (47%), Gaps = 35/311 (11%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+L V N +++ + G AQ+LFD M R+ VSW LISG+ G V+++ F+
Sbjct: 161 NLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMM 220
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGL 204
+N++SW+ I G+ +N +A++LF ++ E G+ PN+VT S+ ACA + LG
Sbjct: 221 EKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGK 280
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I + E + + N+L + K G V A+ VF M +RDV+SW++I+ MG
Sbjct: 281 WIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIII-----MG 335
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+A Y GY EAF F +M +PN F +L+
Sbjct: 336 -----------------------LAMY---GYANEAFNFFAEMIEDGLEPNDISFMGLLT 369
Query: 325 ALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A + G+ + ++ GI + ++DL S+ G + +S+ +
Sbjct: 370 ACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQ--P 427
Query: 384 HVVSWNSMIGG 394
+V+ W +++GG
Sbjct: 428 NVIVWGALLGG 438
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 37/277 (13%)
Query: 392 IGGYGLNGQMEEAKELFDN-MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
IG +G + + +F++ + N +++A++ + +H + + FN L+ PN
Sbjct: 65 IGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPN 124
Query: 451 KS--TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK---------- 498
TF+SVL A A +A + +G+ +H + K G ++F+ +L D Y K
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 499 ---------------------SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
SG ++ +R VFD M +KN +SW+ M+ G A + ++I
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAI 244
Query: 538 NLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
LF +M+ + + PN++T++SVL AC+H G +D G K+ + I+ + D
Sbjct: 245 ELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLG-KWIHRFIRRNKIEVGLFLGNALAD 303
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
M ++ G + EA+ + M E D +W+ ++ G Y
Sbjct: 304 MYAKCGCVLEAKGVFHEM-HERDVISWSIIIMGLAMY 339
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 21/268 (7%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H + + I +L L MY LEA + +++ D++ + +I
Sbjct: 279 GKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAM 338
Query: 100 WGNLEEAQRLF-----DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
+G EA F DG+ E N++S+ L++ G V++ + YF+ P I+
Sbjct: 339 YGYANEAFNFFAEMIEDGL-EPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKI 397
Query: 155 AICGFVQNGFSFEA-LKLFLKLLES-GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
G V + S L L+ S ++PN + + ++ C D G V I +
Sbjct: 398 EHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILE 457
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-----KRDVVSWTVILDVFIE--MGD 265
H L + MG +D A S RM K SW I + E MGD
Sbjct: 458 LD-SNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGD 516
Query: 266 LG--EARRIFDEMPERNEVSWSVMIARY 291
++ RI+ + E+ W + +A Y
Sbjct: 517 SSHPQSLRIYSMI---RELKWKMKVAGY 541
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 310/600 (51%), Gaps = 10/600 (1%)
Query: 102 NLEEAQRLFDGMPE--RNEVSWTALISGFMKHGRVEESMWYFERNP--FQNVISWTAAIC 157
+L A +LFD P R+ + ++++ + G ++ + + P ++ +S+T +
Sbjct: 58 SLASALQLFDETPAPLRDTAARNSVLAALTRAGHLDRAQRLLDEMPRVHRDAVSYTTLVT 117
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+ G + A+ +F +L V PNEVT + A A + G K +
Sbjct: 118 ALARAGHAGRAVAVFRGMLSENVVPNEVTLAGAIMAFARCGAPATVGMIHGFALKRALDG 177
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
V V +L+ + E+ AR++FD M R+ V+W +L+ +++ + A +F +P
Sbjct: 178 FVIVATNLVHAYAGVLELYSARAMFDGMTHRNAVTWNAMLNGYVKAEMIDMAAEVFWRIP 237
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI-VLSALASLKALRSGM 336
ER+EVSW +I Y + +A + + QM + + ++ A A A+ G
Sbjct: 238 ERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDHEVLLVDLMKACARYSAITEGQ 297
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H +LK G + F+ L+ Y CG ++ F D +H SWN+++
Sbjct: 298 QLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMAFKL---SDKSHTASWNALLAALL 354
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
G + EA+ELFD+MP+R+ VSWS +ISGY++ + D+ +F ML + PN+ T +S
Sbjct: 355 RKGLIHEARELFDDMPERDTVSWSTMISGYVQTGRSDMALELFYSMLNTSVEPNEVTLAS 414
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK- 515
L A A +L++GK +H I+ L L D YAK G + + + F+ DK
Sbjct: 415 ALSAIADSGTLDQGKWIHDHIMNRPIQLTDNLSAGLIDMYAKRGSVADAVQFFNCASDKF 474
Query: 516 NEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
+ +S W M+ LA GYA S++LF ++++TSI PN +T + VL AC H+G+V KG Y
Sbjct: 475 SSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHTGMVAKGKYY 534
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
F +M Y I+P +HY C+VD+L R+G L EAE ++ MP + D W S+LS +
Sbjct: 535 FEAMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKADVVIWGSILSAARAQG 594
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N + E+A + L KL + H A V LSNIYA AG W + VRK + ++ + G S +
Sbjct: 595 NIALGEKAAEELAKLDQTHGASKVALSNIYADAGHWTNVSVVRKELQDENFERLVGRSGI 654
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 207/441 (46%), Gaps = 35/441 (7%)
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
+ L+GF +V N +++A L A+ +FDGM RN V+W A+++G++K ++ +
Sbjct: 173 RALDGFVIVATN-LVHAYAGVLELYSARAMFDGMTHRNAVTWNAMLNGYVKAEMIDMAAE 231
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIN 198
F R P ++ +SW I G++ +A+K +++++ E G +EV + KACA +
Sbjct: 232 VFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDHEVLLVDLMKACARYS 291
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
G + +I K GF+ H V +L+ G + LA+ F +K SW +L
Sbjct: 292 AITEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMAFKLSDKSHTASWNALLA 351
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ G + EAR +FD+MPER+ VSWS MI+ Y Q+G + A LF M S +PN
Sbjct: 352 ALLRKGLIHEARELFDDMPERDTVSWSTMISGYVQTGRSDMALELFYSMLNTSVEPNEVT 411
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ LSA+A L G +H H++ I+ +S LID+Y+K G D F+
Sbjct: 412 LASALSAIADSGTLDQGKWIHDHIMNRPIQLTDNLSAGLIDMYAKRGSVADAVQFFNCAS 471
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+K + V WN+MI S I GY H DL
Sbjct: 472 DK-FSSVSPWNAMI--------------------------CSLAIHGY-AHMSLDL---- 499
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYA 497
F+++ + PN TF VL A + KGK + + G + + D
Sbjct: 500 FSQLQRTSIKPNSITFIGVLSACCHTGMVAKGKYYFEAMTREYGIQPTIKHYGCMVDLLG 559
Query: 498 KSGDIESSRRVFDRMPDKNEI 518
++G +E + ++ MP K ++
Sbjct: 560 RAGYLEEAEQLVSMMPMKADV 580
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 181/445 (40%), Gaps = 70/445 (15%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
++++ + E N + + L+K + + +G+ LH ++K G ++ L+
Sbjct: 260 AMKAYVQMVGEVGANDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFDAHAFVQATLV 319
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
Y A K + N ++ A ++ G + EA+ LFD MPER+ VSW+
Sbjct: 320 HFYGCCGLIGLAQMAFKLSDKSHTASWNALLAALLRKGLIHEARELFDDMPERDTVSWST 379
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ISG +VQ G S AL+LF +L + V+PN
Sbjct: 380 MISG-------------------------------YVQTGRSDMALELFYSMLNTSVEPN 408
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
EVT +S A A+ G + H + N I L+
Sbjct: 409 EVTLASALSAIADSGTLDQGKWI-----------HDHIMNRPIQLT-------------- 443
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-NEVS-WSVMIARYNQSGYPEEAF 301
D +S +I D++ + G + +A + F+ ++ + VS W+ MI GY +
Sbjct: 444 -----DNLSAGLI-DMYAKRGSVADAVQFFNCASDKFSSVSPWNAMICSLAIHGYAHMSL 497
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDL 360
LF Q+ R S KPN+ F VLSA + G + A + GI+ + ++DL
Sbjct: 498 DLFSQLQRTSIKPNSITFIGVLSACCHTGMVAKGKYYFEAMTREYGIQPTIKHYGCMVDL 557
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM---EEAKELFDNMPKRNDV 417
+ G ++ + + K A VV W S++ G + E+A E + + +
Sbjct: 558 LGRAGYLEEAEQLVSMMPMK--ADVVIWGSILSAARAQGNIALGEKAAEELAKLDQTHGA 615
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEM 442
S A+ + Y + + V V E+
Sbjct: 616 SKVALSNIYADAGHWTNVSVVRKEL 640
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 314/595 (52%), Gaps = 66/595 (11%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V ++ + + K E+++ F+ P ++V SW I + Q+G +AL+LF ++ S
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G KP+ VT +++ +CA + D G + + ++GF V ++L+
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALV------------ 441
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
D++ + G L A+ +F+++ +N VSW+ MIA Y+ G +
Sbjct: 442 -------------------DMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSK 482
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
LFR+M +P + S +L A + L+ G +H ++++ +E D+F++++LI
Sbjct: 483 SCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLI 542
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
DLY KCG IG A+ +F NMPK N VS
Sbjct: 543 DLYFKCGN-------------------------IGS---------AENVFQNMPKTNVVS 568
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+ +ISGY++ + +F +M +G P+ TF+SVL A + +A LEKGK++H II
Sbjct: 569 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFII 628
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ + + AL D YAK G ++ + +F+++P+++ +SWT M+ G A E++
Sbjct: 629 ESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALK 688
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LFE+M+++ P+++T L++L ACSH+GLVD+G YFN M Y KP HY+C++D+L
Sbjct: 689 LFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLL 748
Query: 599 SRSGRLSEAEDFINSMP-FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
R GRL EA + + P D ++L S C +K + E+ + L + + P+ Y
Sbjct: 749 GRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTY 808
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++LSN+YAS +W + VR + E GL+K+ GCSW+EV ++H F + +P+
Sbjct: 809 IILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQ 863
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 229/487 (47%), Gaps = 69/487 (14%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRL 202
NP ++ W + +N E L++F +LL +KP+ T+ S+ KAC+ +
Sbjct: 258 NPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGY 316
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V + K+GF V V +S + + K + A +FD M +RDV SW ++ +
Sbjct: 317 GKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYY- 375
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
Q G PE+A LF +M FKP++ + V
Sbjct: 376 ------------------------------QDGQPEKALELFEEMKVSGFKPDSVTLTTV 405
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+S+ A L L G +H +++ G D F+S+AL+D+Y KCG + + VF+ I K+
Sbjct: 406 ISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN- 464
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VVSWNSMI GY L G + ELF M +
Sbjct: 465 --VVSWNSMIAGYSLKGDSKSCIELFRRMDEE---------------------------- 494
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G P +T SS+L A + +L+ GK +HG II+ D+F+ ++L D Y K G+I
Sbjct: 495 ---GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 551
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
S+ VF MP N +SW VM+ G + G E++ +F +M K + P+ +T SVL AC
Sbjct: 552 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 611
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
S +++KG + N + ++ N ++DM ++ G + EA N +P E D +
Sbjct: 612 SQLAVLEKGKEIHNFIIE-SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVS 669
Query: 623 WASLLSG 629
W S+++
Sbjct: 670 WTSMIAA 676
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 250/580 (43%), Gaps = 112/580 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V G+ +H H+IK+G + + + + MY +A ++ ++ D
Sbjct: 304 VLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERD 363
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALIS---------------- 126
+ N +I+ Q G E+A LF+ M + + V+ T +IS
Sbjct: 364 VASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHM 423
Query: 127 ----------GFM---------KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
GF+ K G +E + FE+ +NV+SW + I G+ G S
Sbjct: 424 ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS 483
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
++LF ++ E G++P T SSI AC+ + +LG + G I + E + V +SLI
Sbjct: 484 CIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLID 543
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
L K G + A +VF M K +VVSW V++ ++++G EA IF +
Sbjct: 544 LYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTD------------ 591
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
M + KP+ F+ VL A + L L G +H +++ +
Sbjct: 592 -------------------MRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 632
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E + + AL+D+Y+KCG + +F+ + E+D VSW SMI YG +GQ EA +L
Sbjct: 633 EINEVVMGALLDMYAKCGAVDEALHIFNQLPERD---FVSWTSMIAAYGSHGQAFEALKL 689
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ M + S P+K TF ++L A + +
Sbjct: 690 FEKMQQ-------------------------------SDAKPDKVTFLAILSACSHAGLV 718
Query: 468 EKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
++G ++I + GF V + L D + G + + + R PD E ++
Sbjct: 719 DEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRED--VGLLST 776
Query: 527 LAESGYAKESINLFEE-----MEKTSITPNELTILSVLFA 561
L + + + ++L E+ +EK P+ ILS ++A
Sbjct: 777 LFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYA 816
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 139/296 (46%), Gaps = 36/296 (12%)
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +H ++ +G++ ++ + +LI+LY C + +LVF +I ++ + WN ++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTI--ENPLDITLWNGLMAA 271
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
N E E+F + L F P+ T+
Sbjct: 272 CTKNFIFIEGLEVFHRL----------------------LHFPYLK--------PDAFTY 301
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
SVL A + + + GK +H +IK GF DV + ++ YAK E + ++FD MP+
Sbjct: 302 PSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE 361
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ SW ++ + G ++++ LFEEM+ + P+ +T+ +V+ +C+ +++G +
Sbjct: 362 RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEI 421
Query: 575 FNSMEPIYN-IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
ME + + +G + +VDM + G L A++ + + +W S+++G
Sbjct: 422 --HMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ-RKNVVSWNSMIAG 474
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 258/450 (57%), Gaps = 4/450 (0%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L+ + ++G +A+++F+ + + VSW+ +I+ Y + P +AF +F + +P+
Sbjct: 43 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD 102
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ C +SA K L +G VH V + + D + NALID+YS+ G + VF
Sbjct: 103 SFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFK 162
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
++ KDV+ SW S++ G+ +E A+ +FD MP RN VSW+A+I+GY++ +
Sbjct: 163 TMEIKDVS---SWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPG 219
Query: 436 FAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F EM G + P T +VL A + + + G +HG + K DV + AL D
Sbjct: 220 LELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMD 279
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAKSG + + ++F MP ++ SWT M+ GLA G ++ F +M K+ + PNE+T
Sbjct: 280 MYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVT 339
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+LSVL ACSH+GLV +G F M + IKP +HY C+VD+L R+G L EA++ I M
Sbjct: 340 LLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHM 399
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P +PDS W SLLS C + N +AE A K + +L + Y+LL NIY SA RW DA+
Sbjct: 400 PIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDAL 459
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
RK M ++ ++K GCSWVEV VH F
Sbjct: 460 KARKAMRDRRVKKKPGCSWVEVNGVVHEFL 489
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 192/409 (46%), Gaps = 43/409 (10%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+NP +++SWT I ++ +A +F L SG++P+ AC D
Sbjct: 64 QNP--DIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSN 121
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V G++F+ V N+LI + + G +++A SVF ME +DV SWT +L+ FI+
Sbjct: 122 GRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIK 181
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK--PNTSCFS 320
D+ ARRIFDEMP RN VSW+ MI Y Q P LF++M R K P
Sbjct: 182 CNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEM-RAEGKDWPTVITIV 240
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VLS A + A G VH +V K ++ DV ++NAL+D+Y+K G +F + ++
Sbjct: 241 AVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKR 300
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D V SW +MI G L+G+ A E F +M K
Sbjct: 301 D---VFSWTTMISGLALHGKGTHALEAFSDMSK--------------------------- 330
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKS 499
SG +PN+ T SVL A + + +G+ L K+++ G + + D ++
Sbjct: 331 ----SGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRA 386
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G + ++ + + MP K + +V+ R L + ++ L E K I
Sbjct: 387 GLLREAKELIEHMPIKPD---SVIWRSLLSACLVHGNLALAEMAGKMII 432
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 22/413 (5%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
TCL L TSQ + ++ HL +G+ + + + G RK L IV +
Sbjct: 72 TCLISLYLHTSQP--CKAFSIFSHLFHSGLRPDSFCVVGA-VSACGHRKDLSNGRIVHGM 128
Query: 83 N-----GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
G D +V N +I+ + G +E A +F M ++ SWT+L++GF+K +E +
Sbjct: 129 VFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAA 188
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAE 196
F+ P +N +SWTA I G+VQ L+LF ++ G P +T ++ CA+
Sbjct: 189 RRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCAD 248
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
I F LG SV G + K + V+V N+L+ + K G + LA +F M KRDV SWT +
Sbjct: 249 IGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTM 308
Query: 257 LDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YS 311
+ G A F +M + NEV+ +++ + +G E LF++M + +
Sbjct: 309 ISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHG 368
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK--- 368
KP + ++ L LR + H + I+ D I +L+ G
Sbjct: 369 IKPKIQHYGCMVDLLGRAGLLREAKELIEH---MPIKPDSVIWRSLLSACLVHGNLALAE 425
Query: 369 -DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD-NMPKRNDVSW 419
G+++ + + D +++ WN ++ K + D + K+ SW
Sbjct: 426 MAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSW 478
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGF--PYDVFLGTALTDTYAKSGDIESSRR 507
N TF +L SLEK K +HGK + LG L L +TY + G +++
Sbjct: 2 NTQTFYFLL---QKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 58
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF+ + + + +SWT ++ + ++ ++F + + + P+ ++ + AC H
Sbjct: 59 VFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKD 118
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ G + + M + + + ++DM SRSG + A +M + D ++W SLL
Sbjct: 119 LSNG-RIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIK-DVSSWTSLL 176
Query: 628 SGCKTYKNEQIAER 641
+G + + A R
Sbjct: 177 NGFIKCNDIEAARR 190
>gi|302818375|ref|XP_002990861.1| hypothetical protein SELMODRAFT_42073 [Selaginella moellendorffii]
gi|300141422|gb|EFJ08134.1| hypothetical protein SELMODRAFT_42073 [Selaginella moellendorffii]
Length = 517
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/519 (34%), Positives = 282/519 (54%), Gaps = 48/519 (9%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+ + + G + + FE P + V+SW I + +NG + +AL+L + G+K
Sbjct: 41 ALVGMYGRCGDCQTARMVFEGLPEKTVVSWNTVIGAYARNGLAKDALRLMKAMDLEGMKA 100
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +TF S+ +AC + + + +G V+V SL+ +
Sbjct: 101 DRITFLSLVEACTGLGCLAESRLAYARVVSSGLGSDVAVAASLVNM-------------- 146
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
F + L +A+ FD +PE+N VSW+V++A YNQ+G P EA R
Sbjct: 147 -----------------FGKSSSLADAKLAFDTIPEKNVVSWNVIMAAYNQNGCPTEALR 189
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF +MT +P+ F L A SLKAL G VHA V + G D+ + NALI++YS
Sbjct: 190 LFYEMT----EPDKVSFLYALDACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYS 245
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM------PKRND 416
KC D R VFD + +D VSWN+MI Y NG EEA E+F M P +
Sbjct: 246 KCSSPADARNVFDGMTVRDS---VSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKVA 302
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
++W+ +I+ Y ++ + ++ ++ + +P+K F+SVL A +S +LE+GK +H +
Sbjct: 303 LTWARMITAYGQNGFGNEAIELYKQIDV---VPDKVIFASVLDACSSAMNLEEGKRIHAR 359
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
I++ F D + L D Y G +RRVFDR+ ++ +SWT M+ A G + E+
Sbjct: 360 IVEGKFEIDTVVNNTLLDLYGMCG-FGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEA 418
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
I+LF+EM+ + P+E+ L+VLFAC+H+G +G YF SM Y+++ HY CVVD
Sbjct: 419 IDLFQEMQLQGMEPDEVAFLAVLFACNHAGFFRRGWDYFASMRGDYDLEAGADHYCCVVD 478
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN 635
+L R+GRL++AED I SMPF+PD W++L+ C T+ +
Sbjct: 479 LLGRAGRLADAEDLIVSMPFKPDEATWSALVGACNTHGD 517
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 222/510 (43%), Gaps = 88/510 (17%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+VT+ ++ AC+++ D I ++G+ +++V N+L+ + + G+ AR VF+
Sbjct: 1 KVTYLAVVDACSKLFDLNRAKQAHSRIVESGWHANLNVGNALVGMYGRCGDCQTARMVFE 60
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ ++ VVSW + I Y ++G ++A RL
Sbjct: 61 GLPEKTVVSWNTV-------------------------------IGAYARNGLAKDALRL 89
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
+ M K + F ++ A L L +A V+ G+ DV ++ +L++++ K
Sbjct: 90 MKAMDLEGMKADRITFLSLVEACTGLGCLAESRLAYARVVSSGLGSDVAVAASLVNMFGK 149
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
D +L FD+I EK+ VVSWN ++ Y NG EA LF M +
Sbjct: 150 SSSLADAKLAFDTIPEKN---VVSWNVIMAAYNQNGCPTEALRLFYEMTE---------- 196
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
P+K +F L A S+ +L G+D+H + + GF
Sbjct: 197 -------------------------PDKVSFLYALDACVSLKALSDGRDVHASVTRHGFG 231
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D+ LG AL + Y+K +R VFD M ++ +SW M+ A +G+ +E++ +F EM
Sbjct: 232 SDLVLGNALINMYSKCSSPADARNVFDGMTVRDSVSWNTMIATYARNGFGEEAVEVFHEM 291
Query: 544 EKTSITPNE--LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
I P++ LT ++ A +G ++ ++ + ++ + P+ + V+D S +
Sbjct: 292 ALVGIPPDKVALTWARMITAYGQNGFGNEAIELYKQIDVV----PDKVIFASVLDACSSA 347
Query: 602 GRLSEAEDF---INSMPFEPDS---NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
L E + I FE D+ N L C + ++ +R L +
Sbjct: 348 MNLEEGKRIHARIVEGKFEIDTVVNNTLLDLYGMCGFGEARRVFDR-------LDKRDVV 400
Query: 656 GYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+ + YAS G ++A+++ + M +G+
Sbjct: 401 SWTSMMVAYASHGSSLEAIDLFQEMQLQGM 430
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 122/234 (52%), Gaps = 14/234 (5%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G DLV+ N +IN + + +A+ +FDGM R+ VSW +I+ + ++G EE++ F
Sbjct: 231 GSDLVLGNALINMYSKCSSPADARNVFDGMTVRDSVSWNTMIATYARNGFGEEAVEVFHE 290
Query: 144 ------NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
P + ++W I + QNGF EA++L+ ++ V P++V F+S+ AC+
Sbjct: 291 MALVGIPPDKVALTWARMITAYGQNGFGNEAIELYKQI---DVVPDKVIFASVLDACSSA 347
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
+ G + I + FE V N+L+ L M AR VFDR++KRDVVSWT ++
Sbjct: 348 MNLEEGKRIHARIVEGKFEIDTVVNNTLLDL-YGMCGFGEARRVFDRLDKRDVVSWTSMM 406
Query: 258 DVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
+ G EA +F EM E +EV++ ++ N +G+ + F M
Sbjct: 407 VAYASHGSSLEAIDLFQEMQLQGMEPDEVAFLAVLFACNHAGFFRRGWDYFASM 460
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 299/567 (52%), Gaps = 39/567 (6%)
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+ W I +V+NG EAL + ++ G++P++ T+ S+ KAC E D G +
Sbjct: 160 LPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHAS 219
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
I + ++ V NSL+++ K GE+ AR +F+ M +RD VSW ++ + G EA
Sbjct: 220 INASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEA 279
Query: 270 RRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+F +M E N ++W+ + QSG EEA L M Y ++ I L A
Sbjct: 280 FELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGA 339
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ + A++ G +H ++ + + NALI +YS+C + +F S K+ +
Sbjct: 340 CSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKN---I 396
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
++WNSM+ GY + EEA L F EMLLS
Sbjct: 397 ITWNSMLSGYTHMDRSEEASFL-------------------------------FREMLLS 425
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIES 504
G PN T +S+L A VA+L+ GK+ H I+ + GF + L +L D YA+SG +
Sbjct: 426 GIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLE 485
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
++R+FD + ++E+++T ++ G G +E++ LF+EM+K I P+ +T+++VL ACSH
Sbjct: 486 AKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSH 545
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +G+K F M Y I P H+ C+VD+ R+G L +A++ I MP+ P S WA
Sbjct: 546 SGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWA 605
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LL C+ + N +I E A + L ++ E+ YVL++N+YA+AG W VR M + G
Sbjct: 606 TLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLG 665
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+RK+ GC+WV+V + F P
Sbjct: 666 VRKAPGCAWVDVGSGFFPFLVDDTSKP 692
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 194/431 (45%), Gaps = 39/431 (9%)
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + LI GFE+H + L+T D+ +
Sbjct: 112 GKQLHTLIISLGFEQHPIIVPKLVTFYTN-------------------------FDLLAD 146
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+ E I +P W+++I+ Y ++G EA ++QMT +P+ + V
Sbjct: 147 AHTITENSNILHPLP------WNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSV 200
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A + G +HA + + ++F+ N+L+ +Y+K GE R +F++++E+D
Sbjct: 201 LKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERD- 259
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAV 438
VSWN+MI GY G +EA ELF M + N ++W+ I G ++ F+ +
Sbjct: 260 --DVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALEL 317
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ M G + L A + + +++ G+++HG I+ + + AL Y++
Sbjct: 318 LSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSR 377
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
+ + +F KN I+W M+ G ++E+ LF EM + I PN +TI S+
Sbjct: 378 CKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASI 437
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L C+ + G ++ + K + +VDM +RSG++ EA+ +S+
Sbjct: 438 LPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSIS-RR 496
Query: 619 DSNAWASLLSG 629
D + SL++G
Sbjct: 497 DEVTYTSLIAG 507
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 168/337 (49%), Gaps = 39/337 (11%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G++L VHN +++ + G L A+ LF+ M ER++VSW +ISG+ G +E+ F +
Sbjct: 226 GWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGK 285
Query: 144 NPFQ----NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
+ N+I+W G VQ+G EAL+L + G+ + V AC+ I
Sbjct: 286 MRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGA 345
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
+LG + G ++ ++ +V N+LIT+ + + A ++F +++++W +L
Sbjct: 346 IKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSG 405
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ M +R+ EEA LFR+M +PN
Sbjct: 406 YTHM--------------DRS-----------------EEASFLFREMLLSGIEPNYVTI 434
Query: 320 SIVLSALASLKALRSGMHVHAHVL-KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ +L A + L+ G H ++L + G + + + N+L+D+Y++ G+ + + +FDSI
Sbjct: 435 ASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSIS 494
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+D V++ S+I GYG+ G+ EA +LFD M KR+
Sbjct: 495 RRD---EVTYTSLIAGYGIQGEGREALKLFDEMKKRH 528
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 34/251 (13%)
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+LK+L G +H ++ +G E+ I L+ Y+ FD + + AH ++
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTN----------FDLLAD---AHTIT 151
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
NS I + + W+ +IS Y+ + + + +M G
Sbjct: 152 ENSNI---------------------LHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGI 190
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+K T+ SVL A + GK LH I +++F+ +L YAK+G++ ++R
Sbjct: 191 RPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARC 250
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+F+ M +++++SW M+ G A G KE+ LF +M I N +T ++ C SG
Sbjct: 251 LFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGN 310
Query: 568 VDKGLKYFNSM 578
++ L+ + M
Sbjct: 311 FEEALELLSHM 321
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
++ SL +GK LH II LGF + L Y + + + + + + W +
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ +G E+++ +++M I P++ T SVL AC + G K S+
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINA-S 223
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ N + +V M +++G LS A +M E D +W +++SG A
Sbjct: 224 CLGWNLFVHNSLVSMYAKTGELSTARCLFENM-LERDDVSWNTMISG-----------YA 271
Query: 643 VKNLWKLAEE 652
K +WK A E
Sbjct: 272 SKGMWKEAFE 281
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLI-MYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
G+ H ++++ K+ L L+ MY S K LEA + ++ D V + +I
Sbjct: 449 HGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGY 508
Query: 98 IQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERNP 145
G EA +LFD M +R + V+ A++S G V E + FE P
Sbjct: 509 GIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMP 560
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 282/545 (51%), Gaps = 70/545 (12%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
A+ + + GV + +T+S + K C R G V IF G+ + N LI
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ +K F+ +E EA+ +FD+MPERN VSW+ M
Sbjct: 329 MYVK----------FNLLE---------------------EAQVLFDKMPERNVVSWTTM 357
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y+ + + A RL M R PN FS VL A L L+ +H+ ++K+G+
Sbjct: 358 ISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK---QLHSWIMKVGL 414
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
E DVF+ +ALID+YSK GE + EA ++
Sbjct: 415 ESDVFVRSALIDVYSKMGE----------------------------------LLEALKV 440
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F M + V W++II+ + +H D ++ M G ++ST +SVL A S++ L
Sbjct: 441 FREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLL 500
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E G+ H ++K F D+ L AL D Y K G +E ++ +F+RM K+ ISW+ M+ GL
Sbjct: 501 ELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGL 558
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++G++ E++NLFE M+ PN +TIL VLFACSH+GLV++G YF SM +Y I P
Sbjct: 559 AQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPG 618
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C++D+L R+ +L + I+ M EPD W +LL C+ +N +A A K +
Sbjct: 619 REHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEIL 678
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
KL + YVLLSNIYA + RW D VR+ M ++G+RK GCSW+EV Q+H F
Sbjct: 679 KLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGD 738
Query: 708 DHNPK 712
+P+
Sbjct: 739 KSHPQ 743
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 172/396 (43%), Gaps = 105/396 (26%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L+K + V +G+ +H H+ G H + +LT
Sbjct: 291 LIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLT--------------------------- 323
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
N +IN +++ LEEAQ LFD MPERN VSWT +IS + + ++ +
Sbjct: 324 ----NILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAY-SNAQLND---------- 368
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
A++L + GV PN TFSS+ +AC + D + +
Sbjct: 369 --------------------RAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK---QL 405
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I K G E V V ++LI + KMGE+ A VF M D V W I+ F + D
Sbjct: 406 HSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSD- 464
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+EA L++ M R F + S + VL A
Sbjct: 465 ------------------------------GDEALHLYKSMRRVGFPADQSTLTSVLRAC 494
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
SL L G H HVLK ++D+ ++NAL+D+Y KCG +D + +F+ + +KD V+
Sbjct: 495 TSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKD---VI 549
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVS 418
SW++MI G NG EA LF++M PK N ++
Sbjct: 550 SWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHIT 585
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 49/262 (18%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
+ LH ++K G+ + ++ + L+ +Y + LEA ++ +++ D VV N +I A Q
Sbjct: 403 KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQH 462
Query: 101 GNLEEAQRLFD-----GMP--------------------------------ERNEVSWTA 123
+ +EA L+ G P +++ + A
Sbjct: 463 SDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILNNA 522
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + K G +E++ + F R ++VISW+ I G QNGFS EAL LF + G KPN
Sbjct: 523 LLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPN 582
Query: 184 EVTFSSICKACAE---IND----FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
+T + AC+ +N+ FR +++G+ G E H L+ + K+ D
Sbjct: 583 HITILGVLFACSHAGLVNEGWYYFRSMNNLYGI--DPGRE-HYGCMLDLLGRAEKLD--D 637
Query: 237 LARSVFDRMEKRDVVSWTVILD 258
+ + + + + DVV+W +LD
Sbjct: 638 MVKLIHEMNCEPDVVTWRTLLD 659
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 213/688 (30%), Positives = 334/688 (48%), Gaps = 143/688 (20%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY--LG 68
IN + S ++TC+ + +GR H H++K+G+ +R++ LL +Y LG
Sbjct: 57 INKPLLYASLLQTCI-------KVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLG 109
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
S L +R+FDG+ F
Sbjct: 110 SDSLL--------------------------------TRRVFDGL--------------F 123
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
+K +V+SW + I G+V+ G S A++LF +L+SG++PN T S
Sbjct: 124 VK-----------------DVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLS 166
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
++ KAC+EI + LG G++ + GF+ + + +SLI M R
Sbjct: 167 AVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLID-----------------MYGR 209
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
+ VS +AR++FDE+ E + V W+ +I+ + ++ EEA F
Sbjct: 210 NSVS--------------SDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKH 255
Query: 309 R-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
R + P+ F VL+A +L LR G +HA V+ G +V ++L+D+Y
Sbjct: 256 RAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMY------ 309
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
G G +E+++ LFD M RN VSWSA+++ Y
Sbjct: 310 ----------------------------GKCGAVEKSQRLFDRMSNRNSVSWSALLAVYC 341
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+ ++ +F EM + + +F +V+ A A +A++ GK++H + I+ G DV
Sbjct: 342 HNGDYEKAVNLFREM----KEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVI 397
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ +AL D YAK G I + RVFDRMP +N I+W M+ G A++G + +I +FE M K
Sbjct: 398 VESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEG 457
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
I P+ ++ + +LFACSH+GLVD+ YF+ M Y IKP HY C+VD+L R+G L EA
Sbjct: 458 IKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEA 517
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTY-KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
E+ I + DS+ W LL C T N AER K L +L + YV L+N+Y +
Sbjct: 518 ENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRA 577
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
GRW DA+ VR+LM + L+K G SW+
Sbjct: 578 VGRWDDAVKVRELMKNRQLKKMPGQSWM 605
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG-D 501
L I ++S+L V S +G+ H ++K G D F+G +L Y K G D
Sbjct: 52 LYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSD 111
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+RRVFD + K+ +SW M+ G G + +I LF +M + I PN T+ +V+ A
Sbjct: 112 SLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKA 171
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CS G + G K F+ + N + ++DM R+ S+A + + EPD
Sbjct: 172 CSEIGNLVLG-KCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDEL-LEPDPV 229
Query: 622 AWASLLSG 629
W +++S
Sbjct: 230 CWTTVISA 237
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 258/449 (57%), Gaps = 3/449 (0%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G L AR +FD + N W+ MI Y+ S PEEA L+ M +S N F +L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A +S+ A +HAH++K+G +++ +N+L+++YSK G+ K RL+FD + ++D
Sbjct: 126 KACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT- 184
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSWNSMI GY G++E A E+F++MP+RN +SW+++ISG + + +F+ M
Sbjct: 185 --VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQ 242
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+G + S L A A + L++GK +H I K D LG L D YAK GD+E
Sbjct: 243 TAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLE 302
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ VF +M +K WT M+ G A G +E++ F +M+ + PN++T +L ACS
Sbjct: 303 EAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACS 362
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV + F SME I+ KP+ HY C+VD+L R+G L EAE+ I +MP +P++ W
Sbjct: 363 HAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIW 422
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL+ C + N ++ ++ K L ++ H Y+ L++I+A+AG W A VR+ M E+
Sbjct: 423 GALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G+ K GCS + V H F + +P+
Sbjct: 483 GVSKLPGCSVISVNGTAHEFLAGDESHPQ 511
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 199/427 (46%), Gaps = 42/427 (9%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALI-SGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + + + D +P +++ A SG + + R F+R N W I G+
Sbjct: 39 GQMLKTGLILDEIPASKLLAFCASPNSGSLAYART-----VFDRIFRPNTFMWNTMIRGY 93
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ EAL L+ +L V N TF + KAC+ ++ + I K GF +
Sbjct: 94 SNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEI 153
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
NSL+ + K G++ AR +FD++++RD VSW ++D + + G++ A IF+ MPER
Sbjct: 154 YTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPER 213
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N +SW+ MI+ +G P+EA LF +M K + L A A L L G +H
Sbjct: 214 NIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIH 273
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
A++ K IE D + LID+Y+KCG+ ++ VF + EK V+ W +MI GY ++G
Sbjct: 274 AYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS---VWTAMISGYAIHG 330
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+ EA E W F +M +G PN+ TF+ +L
Sbjct: 331 RGREALE------------W-------------------FMKMQTAGVEPNQMTFTGILT 359
Query: 460 ASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NE 517
A + + + K L + ++ GF + + D ++G ++ + + + MP K N
Sbjct: 360 ACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNA 419
Query: 518 ISWTVMV 524
W ++
Sbjct: 420 AIWGALL 426
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 178/393 (45%), Gaps = 39/393 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +S + + + +H H+IK G E Y T LL +Y S
Sbjct: 124 LLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKS----------------- 166
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G+++ A+ LFD + +R+ VSW ++I G+ K G +E + F P
Sbjct: 167 --------------GDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPE 212
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N+ISWT+ I G V G EAL LF ++ +G+K + V S +ACA++ G +
Sbjct: 213 RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWI 272
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I K E + LI + K G+++ A VF +ME++ V WT ++ + G
Sbjct: 273 HAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRG 332
Query: 267 GEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSI 321
EA F +M E N+++++ ++ + +G EA LF M R + FKP+ +
Sbjct: 333 REALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC 392
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
++ L L+ + + + ++ + I AL++ G + G+ + +++ D
Sbjct: 393 MVDLLGRAGLLKEAEEL---IENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVD 449
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
H + + + G+ +A + M ++
Sbjct: 450 PGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 146/297 (49%), Gaps = 42/297 (14%)
Query: 365 GETKDGRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G+ L+ D I K +A S NS G + A+ +FD + + N W+ +I
Sbjct: 39 GQMLKTGLILDEIPASKLLAFCASPNS--------GSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
GY K+ + +++ ML N TF +L A +S+++ E+ + +H IIK+GF
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFG 150
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDR-------------------------------M 512
+++ +L + Y+KSGDI+S+R +FD+ M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
P++N ISWT M+ G +G KE++NLF M+ I + + ++S L AC+ G++D+G
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG- 269
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
K+ ++ + I+ + ++DM ++ G L EA + M E + W +++SG
Sbjct: 270 KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISG 325
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 298/618 (48%), Gaps = 65/618 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL++ + A G L A+RLFDG+P + V + +I +
Sbjct: 45 DLLLASYCALAKAGHGVLCHARRLFDGIPGPDRVMYNTIIRAY----------------- 87
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ EAL+L +L G+ PNE T + KAC L+
Sbjct: 88 --------------CNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHALA 133
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V G+ + G V V N+L L + G
Sbjct: 134 VHGVALRLGLVGQVFVGNAL-------------------------------LHSYASAGS 162
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
LG++RR FDEM +RN VSW+ MI Y Q+G E LF +M R F + +L A
Sbjct: 163 LGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIA 222
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L G VH +L G D+ + +AL+D+Y KCG+ R F+ + K V
Sbjct: 223 CSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSV--- 279
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW SM+ +G + A+ FD+MP+RN VSW+A+IS Y++ Q ++N+M
Sbjct: 280 VSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQ 339
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G P++ T +VL AS + L GK +H I + DV L +L D YAK G ++++
Sbjct: 340 GLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTA 399
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+F M ++N +SW V++ GLA G A ++I F M S P+ +T +++L ACSH
Sbjct: 400 ISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHG 459
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GL++ G YF SM +YN+K HY C+VD+L R G L +A I MP +PD W +
Sbjct: 460 GLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGA 519
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL C+ + N +I + +K L +L +VL+SN+ +W D +RKLM E G
Sbjct: 520 LLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRLRKLMKEWGT 579
Query: 686 RKSGGCSWVEVRNQVHFF 703
RK G S +E+ N +H F
Sbjct: 580 RKDMGVSSIEINNSIHEF 597
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 466 SLEKGKDLHGKII---KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
S+++ LH ++ L D+ L + A G + +RR+FD +P + + +
Sbjct: 23 SIQRLNQLHAHLLVHGSLSAASDLLLASYCALAKAGHGVLCHARRLFDGIPGPDRVMYNT 82
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
++R S +E++ L M + I PNE T+ V+ AC+
Sbjct: 83 IIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACT 123
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 205/734 (27%), Positives = 352/734 (47%), Gaps = 113/734 (15%)
Query: 27 LLKDI---TSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN 83
LL+D+ T +++GR LH ++KTG Y+T L +Y + A + +N
Sbjct: 14 LLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSIN 73
Query: 84 GFD--------------------------------LVVHNCMINANIQWGNLEEAQRLFD 111
D + +N + NA+ G A L D
Sbjct: 74 DNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSD 133
Query: 112 GMPERNEVS-------------WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ + S ++L++ + K G V ++ F+R P +N +SW I G
Sbjct: 134 VVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISG 193
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+ + + +A+++F + NE +S+ A G V L K G
Sbjct: 194 YASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAI 253
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
VSV N+L+T+ K G +D +A R F+ +
Sbjct: 254 VSVANALVTMYAKCGSLD-------------------------------DAVRTFEFSGD 282
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+N ++WS M+ Y Q G ++A +LF +M P+ V++A + L A+ G +
Sbjct: 283 KNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQM 342
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H+ K+G +++ +A++D+Y+KCG D R F+ + + DV
Sbjct: 343 HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDV---------------- 386
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
V W++II+GY+++ ++ ++ +M + IPN+ T +SVL
Sbjct: 387 ------------------VLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVL 428
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A +S+A+L++GK +H +IIK GF +V +G+AL+ Y K G ++ +F RMP ++ I
Sbjct: 429 RACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVI 488
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW M+ GL+++G+ +++ LFE+M I P+ +T +++L ACSH GLVD+G +YF M
Sbjct: 489 SWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMM 548
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+NI P HY C+VD+LSR+G+L+EA++FI S + W LL CK ++N ++
Sbjct: 549 FDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYEL 608
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
A + L +L + YVLLS+IY + G + VR++M +G+ K GCSW+E++
Sbjct: 609 GVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKG 668
Query: 699 QVHFFFQKTDHNPK 712
VH F + +P+
Sbjct: 669 LVHVFVVGDNQHPQ 682
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 212/666 (31%), Positives = 336/666 (50%), Gaps = 97/666 (14%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
+H LI TG+ K LTTR+++ + SR+ A
Sbjct: 15 IHARLITTGVIKNSNLTTRIVLAFASSRRQYLA--------------------------- 47
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
E A+ +F+ E + S + +G E+ PF W A I
Sbjct: 48 -EFARCVFE---EHHVYS--------LPYGETED--------PFL----WNAVIKSHSHG 83
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
+L LF +LE+GV ++ + S + KAC+ + + G+ + G + K G + +
Sbjct: 84 TDPRRSLFLFCLMLENGVSVDKFSLSLVLKACSRLGFVKAGMXIHGFLRKTGLWSDLFLQ 143
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE--RN 280
N LI L LK G + +R VFDRM +RD VS+ ++D +++ G + AR +FD MP+ +N
Sbjct: 144 NCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKN 203
Query: 281 EVSWSVMIARYNQ-SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+SW+ +I+ Y Q S A +LF +M
Sbjct: 204 LISWNCLISGYAQTSDGVNIASKLFSEMP------------------------------- 232
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
EKD+ N++ID Y K G +D + +FD + +DV ++W +MI GY G
Sbjct: 233 --------EKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRRDV---ITWATMIDGYAKLG 281
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+ +AK LFD +P R+ V+++++++GY+++K +F +M + P+++T VL
Sbjct: 282 FIHQAKTLFDQIPHRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVL 341
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A + L K D+H I+K F LG AL D Y+K G I+ + VF + +KN
Sbjct: 342 SAIAQLGRLSKAMDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNID 401
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W ++ GLA G + ++ ++E+ SI P+++T + VL ACSHSGLV +GL F M
Sbjct: 402 HWNAIIGGLAIHGLGGPAFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELM 461
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ I+P +HY C+VD+LSRSG + A+ I MP EP+ W + L+ C +K ++
Sbjct: 462 RRKHKIEPRLQHYGCMVDILSRSGSIELAKILIEKMPIEPNDVIWRTFLTACSHHKEFEM 521
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E K+L A +P+ YVLLSN+YAS G W D VR +M E+ ++K GCSW+E+
Sbjct: 522 GELVAKHLILQAGYNPSSYVLLSNMYASCGMWKDVRRVRTMMKERKIQKIPGCSWIELDG 581
Query: 699 QVHFFF 704
+VH FF
Sbjct: 582 RVHEFF 587
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/511 (22%), Positives = 194/511 (37%), Gaps = 142/511 (27%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V G +HG L KTG+ + +L L+ +YL + ++ + D
Sbjct: 111 VLKACSRLGFVKAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRD 170
Query: 87 LVVHNCMINANIQWGNLEEAQRLFD----------------------------------G 112
V +N MI+ ++ G +E A+ LFD
Sbjct: 171 SVSYNSMIDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSE 230
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI---------------- 156
MPE++ +SW ++I G++KHGR+E++ F+ P ++VI+W I
Sbjct: 231 MPEKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLF 290
Query: 157 ---------------CGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDF 200
G+VQN + EAL+LF+K+ ES + P+E T + A A++
Sbjct: 291 DQIPHRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGRL 350
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+ + I K F + +LI + K G + A VF +E +++ W I
Sbjct: 351 SKAMDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAI---- 406
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
I G AF + Q+ R S KP+ F
Sbjct: 407 ---------------------------IGGLAIHGLGGPAFDMLLQIERLSIKPDDITFI 439
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI--- 377
VL+A S G K+G L F+ +
Sbjct: 440 GVLNAC-----------------------------------SHSGLVKEGLLCFELMRRK 464
Query: 378 --VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
+E + H + M+ +G +E AK L + MP + NDV W ++ HK+F++
Sbjct: 465 HKIEPRLQH---YGCMVDILSRSGSIELAKILIEKMPIEPNDVIWRTFLTACSHHKEFEM 521
Query: 435 VFAVFNEMLL-SGEIPNKSTFSSVLCASASV 464
V ++L +G P+ S + AS +
Sbjct: 522 GELVAKHLILQAGYNPSSYVLLSNMYASCGM 552
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 299/582 (51%), Gaps = 38/582 (6%)
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
S+ AL +G G V + F+R P + + + I + + EAL L ++ G
Sbjct: 50 SYCALPAG----GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRG 105
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ PNE T + KACA + + + G++ K GF V V N+L
Sbjct: 106 ILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNAL-------------- 151
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
L + G LG++RR FDEM +RN VSW+ MI Y Q+G E
Sbjct: 152 -----------------LHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTRE 194
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A LF M R + +L A ++ L G VH+H+L G D+ ++NAL+D
Sbjct: 195 ACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVD 254
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y KCG+ FD + K+ VSW SM+ ++ A++ F+ +P+++ +SW
Sbjct: 255 MYGKCGDLLMAHTCFDMMPFKNA---VSWTSMLCALAKRASIDAARDWFEQIPEKSIISW 311
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+A+IS Y++ +F ++N M L G P++ T ++VL A + L GK +H I
Sbjct: 312 NAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRD 371
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
V L +L D YA+ G ++++ +F MP KN ISW ++ LA G A++++
Sbjct: 372 NFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMF 431
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F M + P+E+T +++L AC+H GL++ G YF +M +YN+KP HY C+VD+L
Sbjct: 432 FRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLG 491
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R G+L++A D I MP PD W +LL C+ + + QI ++ +K L +L +VL
Sbjct: 492 RGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVL 551
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
+SN+ +W D +RKLM E G++K+ G S +E + +H
Sbjct: 552 ISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIH 593
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 204/448 (45%), Gaps = 56/448 (12%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N ++++ G+L +++R FD M +RN VSW ++I+G
Sbjct: 147 VGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMING--------------------- 185
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+ Q G + EA LF + G+ +E T S+ AC+ + G V
Sbjct: 186 ----------YAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHS 235
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ G + + N+L+ + K G++ +A + FD M ++ VSWT +L + +
Sbjct: 236 HLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDA 295
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR F+++PE++ +SW+ MI+ Y Q G EA L+ +M P+ + VLSA
Sbjct: 296 ARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQ 355
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L L SG +H + V + N+L+D+Y++CG+ +F + K+ V+SW
Sbjct: 356 LGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKN---VISW 412
Query: 389 NSMIGGYGLNGQMEEA-----KELFDNMPKRNDVSWSAIIS-----GYLEHKQ--FDLVF 436
N++IG ++G+ ++A +FD P +++++ A++S G LE Q F +
Sbjct: 413 NAIIGALAMHGRAQDALMFFRSMVFDAFPP-DEITFVALLSACNHGGLLEAGQYYFQAMR 471
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
V+N P ++ ++ L K DL I + DV + AL
Sbjct: 472 HVYNVK------PGVEHYACMVDLLGRGGQLAKAVDL---IKDMPMRPDVVVWGALLGAC 522
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMV 524
G I+ ++V ++ + +S + V
Sbjct: 523 RIHGHIQIGKQVIKQLLELEGMSGGLFV 550
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 147/301 (48%), Gaps = 10/301 (3%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
DL++ N +++ + G+L A FD MP +N VSWT+++ K ++ + +FE+
Sbjct: 244 IDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQI 303
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +++ISW A I +VQ G EAL L+ ++ G+ P+E T +++ AC ++ D G
Sbjct: 304 PEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGK 363
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ I V++ NSL+ + + G+VD A S+F M ++V+SW I+ G
Sbjct: 364 MIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHG 423
Query: 265 DLGEA-----RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSC 318
+A +FD P +E+++ +++ N G E F+ M Y+ KP
Sbjct: 424 RAQDALMFFRSMVFDAFPP-DEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEH 482
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++ ++ L L + + + + + DV + AL+ G + G+ V ++
Sbjct: 483 YACMVDLLGRGGQLAKAVDL---IKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLL 539
Query: 379 E 379
E
Sbjct: 540 E 540
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 310/584 (53%), Gaps = 13/584 (2%)
Query: 137 SMWYFERNPFQNVISWTAAICGF---VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
++ F+R P + TA F +G LF ++ + V+P+ TF + K
Sbjct: 56 ALHLFDRMPASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFK- 114
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVS-----VCNSLITLSLKMGEVDLARSVFDRMEKR 248
C+ + R L ++ A + V NSLI + ++G R FD + +
Sbjct: 115 CSSSSRPRALLCT--MLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVK 172
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D VSWT+++ +MG L +AR + + P R+ +SW+ +IA Y+++ +EA F+ M
Sbjct: 173 DAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNML 232
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
P+ VLSA + LK L G +H+ V + G+ + ALID+Y+KCG+
Sbjct: 233 SEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFG 292
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
R VFD++ SWN++I GY +G ++ A+ LFD M R+ ++++++I+GY+
Sbjct: 293 HAREVFDAVGRGRRPQ--SWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIH 350
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
Q +F M + T S+L A AS+ +L +G+ LH I D+++
Sbjct: 351 SGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYI 410
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GTAL D Y K G + + VF RM ++ +WT M+ GLA +G K + F +M
Sbjct: 411 GTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGF 470
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
PN ++ ++VL ACSHS L+++G YF+ M +YNI P HY C++D+L RSG L EA
Sbjct: 471 QPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAM 530
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
D + +MP +P+S WAS+LS C+ +K +A+ A ++L K+ + A YV L NI +
Sbjct: 531 DLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSR 590
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+W DA +R LM E+ ++K+ G S V V QVH F +P+
Sbjct: 591 KWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPR 634
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 183/342 (53%), Gaps = 8/342 (2%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N +I+ + G + +R FD +P ++ VSWT +ISG K G + ++ + P ++
Sbjct: 145 VANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRD 204
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
VISWT+ I + + + EA+ F +L G+ P++VT + AC+++ D LG S+
Sbjct: 205 VISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHS 264
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLG 267
L+ + G ++ +LI + K G+ AR VFD + + R SW I+D + + G +
Sbjct: 265 LVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVD 324
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
AR +FD+M R+ ++++ MI Y SG EA LF M R+ + + +LSA A
Sbjct: 325 VARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACA 384
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
SL AL G +HA + +E D++I AL+D+Y KCG + +VF + ++DV +
Sbjct: 385 SLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVH---A 441
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISG 425
W +MI G NG + E F M + N VS+ A+++
Sbjct: 442 WTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTA 483
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 155/630 (24%), Positives = 276/630 (43%), Gaps = 118/630 (18%)
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V S I GF+++G + A ++ ++ SG++ TFS+I C+ L +
Sbjct: 760 RDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYE----ALQL 815
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + G CN + + +++ ++ +
Sbjct: 816 HGRVLALGL-----CCNPFVG--------------------------SALVNHYMHVESP 844
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN--TSCFSIVLS 324
+ +F E+P +N +V++ EE F M R + N + C+++
Sbjct: 845 HASLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMK-G 903
Query: 325 ALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ + L G +H VLK G I ++F+SN+L+DLYS G++ D + I+ +D
Sbjct: 904 CYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSED-- 961
Query: 384 HVVSWNSMIGGYGLNGQMEEA----KELF--DNMPK-RNDVSWSAI------------IS 424
V+SWNS++ Y G M+EA K++ MP R+ VS A+ I
Sbjct: 962 -VISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIH 1020
Query: 425 GYLE---------HKQ------------FDLVFAVFNE---------------------- 441
G + H Q FD A+FNE
Sbjct: 1021 GIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMF 1080
Query: 442 ---------MLLSGEIPNKSTFSSVLCA---SASVASLEKGKDLHGKIIKLGFPYDVFLG 489
M++ G P+ TFS+ + A SAS SL + LH ++KLGF D+ +
Sbjct: 1081 DAALEILHCMIVEGVTPDDVTFSATMKAISLSAS-PSLTSCQMLHSCLVKLGFEMDMAVC 1139
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
++L YA +G + SS +F+ + D N I +T ++ A G ++ LF++M + +
Sbjct: 1140 SSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLK 1199
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+ +T L + C +G+ ++G M + P+ RH+ C+V++LSR G + EA +
Sbjct: 1200 PDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAME 1259
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
+ P + AW+SLL CK + + +RA L + + PA + +SN + G
Sbjct: 1260 MMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGD 1319
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
A+ ++++ K ++KSG S +EV ++
Sbjct: 1320 RETALRIKEMTNVKEVKKSGH-SLIEVSHR 1348
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 50/338 (14%)
Query: 39 QGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
QGR LHG ++K G I +L+ L+ +Y S++ + + D+ D++ N +++
Sbjct: 913 QGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMY 972
Query: 98 IQWGNLEEA-----QRLFDG-MPE-RNEVSWTALIS-------GFMKHGRV--------- 134
G+++EA Q L+ G MP R+ VS AL G HG V
Sbjct: 973 ADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSS 1032
Query: 135 -----------------EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
+ S+ F P + + I ++ AL++ ++
Sbjct: 1033 VHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLRCNMFDAALEILHCMIV 1092
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLS--VFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
GV P++VTFS+ KA + L + + K GFE ++VC+SLIT G++
Sbjct: 1093 EGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQL 1152
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARY 291
+ +F+ + +V+ +T I+ GD A +FD+M + + V++ IA
Sbjct: 1153 SSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGC 1212
Query: 292 NQSGYPEEAFRLFRQMTRYS--FKPNTSCFSIVLSALA 327
+Q+G EE RL ++ R S P+ F+ +++ L+
Sbjct: 1213 DQAGMFEEG-RLVIELMRASRELDPDERHFACMVNLLS 1249
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 20/309 (6%)
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M R+ S + +I+G++ D AV+ M+ SG TFS++L V S +
Sbjct: 756 TMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTIL----GVCSTYE 811
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
LHG+++ LG + F+G+AL + Y +S +F +P +N V++RGL
Sbjct: 812 ALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGN 871
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG-LVDKGLKYFNSMEPIYNIKPNG 588
+E I F +M + + N L+ + C +G +++G + + I N
Sbjct: 872 LKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNI 931
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV----K 644
+VD+ S G + +N + E D +W S+LS Y + + AV +
Sbjct: 932 FLSNSLVDLYSAIGDSVDTVKALNDILSE-DVISWNSILS---MYADRGHMKEAVYYLKQ 987
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
LW +V L + G W + + ++ + G CS V V+ + +
Sbjct: 988 MLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGF----SCSSVHVQTTLIDMY 1043
Query: 705 QKT---DHN 710
K DH+
Sbjct: 1044 GKCCCFDHS 1052
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 33 SQNLVIQGRALHGHL-IKTGIHKE---RYLTT--RLLIMYLGSRKSLEANEIVKDLNGFD 86
S N +I G HGH+ + + + R + T ++ Y+ S + EA + ++ D
Sbjct: 309 SWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHD 368
Query: 87 LVVHN----CMINANIQWGNLEEAQRLFDG----MPERNEVSWTALISGFMKHGRVEESM 138
L V N +++A G L + + L + E + TAL+ +MK GRV E+
Sbjct: 369 LRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEAT 428
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE-- 196
F+R ++V +WTA I G NG L+ F ++ G +PN V++ ++ AC+
Sbjct: 429 IVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSC 488
Query: 197 -INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWT 254
+N+ RL +++ + +I L + G +D A + M + + V W
Sbjct: 489 LLNEGRLYFDEMRILYN--IHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWA 546
Query: 255 VIL 257
IL
Sbjct: 547 SIL 549
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL S + QGRALH + + + Y+ T LL MY+ + EA + + +
Sbjct: 375 TVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRM 434
Query: 83 NGFDLVVHNCMINANIQWGNLEEA------QRLFDGMPERNEVSWTALISGFMKHGRVEE 136
D+ MI A + + + +A Q DG + N VS+ A+++ + E
Sbjct: 435 GKRDVHAWTAMI-AGLAFNGMGKAGLEYFYQMRCDGF-QPNPVSYIAVLTACSHSCLLNE 492
Query: 137 SMWYFER-----NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
YF+ N + + I ++G EA+ L + ++PN V ++SI
Sbjct: 493 GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM---PMQPNSVIWASIL 549
Query: 192 KAC 194
AC
Sbjct: 550 SAC 552
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 233/831 (28%), Positives = 382/831 (45%), Gaps = 177/831 (21%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL---- 58
+S R LF P+T+ +D+ + N ++ A H G H R L
Sbjct: 708 SSARKLFDTTPDTN------------RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSV 755
Query: 59 --TTR----------LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEA 106
TTR LL + +SL + L +D+ V ++N ++G + EA
Sbjct: 756 VSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQ-WDVFVAGALVNIYAKFGLIREA 814
Query: 107 QRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF---ERNPFQ---------------- 147
+ LFDGM R+ V W ++ ++ E+M F R F+
Sbjct: 815 RVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCK 874
Query: 148 ------------------------NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+VI W A+ F+Q G ++EA+ F+ ++ S V +
Sbjct: 875 KNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACD 934
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+TF + A +N LG + G++ ++G ++ VSV N LI + +K G V ARSVF
Sbjct: 935 GLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFG 994
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+M + D+ +SW+ MI+ SG E + +
Sbjct: 995 QMNEVDL-------------------------------ISWNTMISGCTLSGLEECSVGM 1023
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLK-ALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F + R S P+ + VL A +SL+ +HA +K G+ D F+S ALID+YS
Sbjct: 1024 FVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYS 1083
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ----------MEEAKELFDNMP 412
K G+ ++ +F V +D + SWN+++ GY ++G M+E+ E D +
Sbjct: 1084 KRGKMEEAEFLF---VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQIT 1140
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFA-----------------------------VFNEM- 442
N + + G + KQ V VF+E+
Sbjct: 1141 LVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP 1200
Query: 443 ---------LLSGEIPN---------------------KSTFSSVLCASASVASLEKGKD 472
++SG + N + TF++++ A + + +LE+G+
Sbjct: 1201 SPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQ 1260
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+H I+KL +D F+ T+L D YAK G+IE +R +F R + SW M+ GLA+ G
Sbjct: 1261 IHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGN 1320
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
AKE++ F+ M+ + P+ +T + VL ACSHSGLV + + F SM+ Y I+P HY+
Sbjct: 1321 AKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYS 1380
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
C+VD LSR+GR+ EAE I+SMPFE ++ + +LL+ C+ + + +R + L L
Sbjct: 1381 CLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPS 1440
Query: 653 HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
A YVLLSN+YA+A +W + + R +M + ++K G SWV+++N+VH F
Sbjct: 1441 DSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLF 1491
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 213/470 (45%), Gaps = 78/470 (16%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRM----EKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
C S++ ++ ++ L + R+ D ++ ++ + G L AR++FD P
Sbjct: 659 CFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 278 ERNE--VSW----SVMIARYNQSGYPEEAFRLFRQ----MTRYSFKPNTSCFSIVLSALA 327
+ N V+W S + A ++S FRL R+ TR++ P F + L + A
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAP---VFKMCLLS-A 774
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
S A S +H + +KIG++ DVF++ AL+++Y+K G ++ R++FD + +DV V
Sbjct: 775 SPSASES---LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDV---VL 828
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKR----NDVS------------------------- 418
WN M+ Y EA LF + +DV+
Sbjct: 829 WNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYAT 888
Query: 419 --------------WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
W+ +S +L+ + F +M+ S + TF +L A +
Sbjct: 889 KLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGL 948
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
LE GK +HG +++ G V +G L + Y K+G + +R VF +M + + ISW M+
Sbjct: 949 NCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMI 1008
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G SG + S+ +F + + S+ P++ T+ SVL ACS +G Y + +
Sbjct: 1009 SGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL----EGGYYLATQIHACAM 1064
Query: 585 KP----NGRHYTCVVDMLSRSGRLSEAE-DFINSMPFEPDSNAWASLLSG 629
K + T ++D+ S+ G++ EAE F+N F D +W +++ G
Sbjct: 1065 KAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGF--DLASWNAIMHG 1112
>gi|147864471|emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
Length = 871
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 302/570 (52%), Gaps = 57/570 (10%)
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE-INDFRLGLSVFGLIFKAG 214
I GF + G S + L LF K+ + GV PN+ T S + K+C+ +ND R+G + G I + G
Sbjct: 69 ISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNG 128
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+ + NS++ +K A +F M ++D VSW +++ ++++GD+ ++ +F
Sbjct: 129 VDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFR 188
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
++P ++ SW+ MI ++G A L +M N FSI L +SL L
Sbjct: 189 QLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGL 248
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI------------VEKDV 382
G +H VLK+G+ D F+ N+LID+Y KCGE + ++F + + V
Sbjct: 249 GKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPRESSMMNSEESCDDAV 308
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VSW+SM+ GY NG E+A + F S++I +E +F
Sbjct: 309 VESVSWSSMVSGYVQNGGFEDALKTF-----------SSMICSQVEVDKF---------- 347
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
T +SV+ A AS LE G+ +HG I K+G DVFLG+++ D Y K G +
Sbjct: 348 ----------TLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSL 397
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ +F++ D+N + WT M+ G A G +E++ LFE M ITPNE++ + VL AC
Sbjct: 398 NDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTAC 457
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH+GL+++G KYF M +Y I+P H+TC+VD+ R+GRL+E ++FI++ S+
Sbjct: 458 SHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSV 517
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W S LS C+ +KN ++ +W L A +V LS + + +R LM +
Sbjct: 518 WRSFLSSCRVHKNIEMG------IWDLTFCFLA-FVPLSKDGKRSAK------IRSLMQQ 564
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G++K+ SW++++N VH F +P+
Sbjct: 565 RGVKKNPSQSWIQLKNHVHSFVMGDRSHPQ 594
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 201/427 (47%), Gaps = 65/427 (15%)
Query: 83 NGFDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NG DL V++N +++ ++ A++LF M E++ VSW ++S +++ G +++S+
Sbjct: 127 NGVDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDL 186
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F + P ++ SW I G ++NG AL+L K++ +G N++TFS + ++
Sbjct: 187 FRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVL 246
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG + + K G V NSLI + K GE++ A +F + +
Sbjct: 247 GLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPR------------- 293
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
E + D + E VSWS M++ Y Q+G E+A + F M + + +
Sbjct: 294 -ESSMMNSEESCDDAVVE--SVSWSSMVSGYVQNGGFEDALKTFSSMICSQVEVDKFTLT 350
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+SA AS L G VH ++ KIG DVF+ +++ID+Y KCG D L+F+ ++
Sbjct: 351 SVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDR 410
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ VV W SMI G L+GQ EA LF+ M N
Sbjct: 411 N---VVLWTSMISGCALHGQGREAVRLFELM---------------------------IN 440
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKG-------KDLHGKIIKLGFPYDVFLGTALT 493
E G PN+ +F VL A + LE+G ++++G I+ G + T +
Sbjct: 441 E----GITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYG--IRPGAEH----FTCMV 490
Query: 494 DTYAKSG 500
D Y ++G
Sbjct: 491 DLYGRAG 497
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 189/377 (50%), Gaps = 31/377 (8%)
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS-LKALRSGMHVHAHVLK 344
V+I+ + + G + LF +M PN SIVL + +S + R G +H +L+
Sbjct: 67 VLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILR 126
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
G++ D ++N+++D Y KC +F + EKD VSWN M+ Y G M+++
Sbjct: 127 NGVDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKD---TVSWNIMMSSYLQIGDMQKS 183
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+LF +P ++ SW+ +I G + + + + +M+ +G NK TFS L ++S+
Sbjct: 184 VDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSL 243
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN-------- 516
+ L GK +H +++K+G D F+ +L D Y K G++E + +F +P ++
Sbjct: 244 SVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPRESSMMNSEES 303
Query: 517 -------EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+SW+ MV G ++G ++++ F M + + ++ T+ SV+ AC+ +G+++
Sbjct: 304 CDDAVVESVSWSSMVSGYVQNGGFEDALKTFSSMICSQVEVDKFTLTSVVSACASAGVLE 363
Query: 570 KGLKYFNSMEPIYNIKPNGRHY---TCVVDMLSRSGRLSEAEDFINSMPFEPDSNA--WA 624
G + ++ I +G + ++DM + G L++A N D N W
Sbjct: 364 LGRQVHGYIQKI----GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQ---AKDRNVVLWT 416
Query: 625 SLLSGCKTYKNEQIAER 641
S++SGC + + A R
Sbjct: 417 SMISGCALHGQGREAVR 433
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 30/274 (10%)
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
L + L ++ LG + + ++ +GF V N +I+ + G +E+A +F +P
Sbjct: 239 LASSLSVLGLGKQIHTQVLKVGVLDDGF---VRNSLIDMYCKCGEMEKASVIFKHLPR-- 293
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVI---SWTAAICGFVQNGFSFEALKLFLK 174
E SM E + V+ SW++ + G+VQNG +ALK F
Sbjct: 294 -----------------ESSMMNSEESCDDAVVESVSWSSMVSGYVQNGGFEDALKTFSS 336
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
++ S V+ ++ T +S+ ACA LG V G I K G V + +S+I + +K G
Sbjct: 337 MICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGS 396
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIAR 290
++ A +F++ + R+VV WT ++ G EA R+F+ M NEVS+ ++
Sbjct: 397 LNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTA 456
Query: 291 YNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
+ +G EE + FR M Y +P F+ ++
Sbjct: 457 CSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMV 490
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 62/171 (36%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +HG++ K G +G D+ + + +I+ ++
Sbjct: 365 GRQVHGYIQKIG-------------------------------HGLDVFLGSSIIDMYVK 393
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+L +A +F+ +RN V WT++ISG HG+
Sbjct: 394 CGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGR------------------------ 429
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
EA++LF ++ G+ PNEV+F + AC+ G F L+
Sbjct: 430 -------EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLM 473
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 188/595 (31%), Positives = 313/595 (52%), Gaps = 44/595 (7%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES--- 178
+ LIS + + R +++ F+ +N S+ A + + F+A LFL + S
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 179 ---GVKPNEVTFSSICKACAEINDFRLG---LSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
+P+ ++ S + KA + +DF LG V G + + GF+ V V N +IT K
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
++ AR++FDEM ER+ VSW+ MI+ Y+
Sbjct: 181 DNIE-------------------------------SARKVFDEMSERDVVSWNSMISGYS 209
Query: 293 QSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
QSG E+ ++++ M S FKPN V A L G+ VH +++ I+ D+
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ NA+I Y+KCG R +FD + EKD V++ ++I GY +G ++EA LF M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDS---VTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
+W+A+ISG +++ + V F EM+ G PN T SS+L + ++L+ GK
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H I+ G ++++ T++ D YAK G + ++RVFD D++ I+WT ++ A G
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHG 446
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ + +LF++M+ P+++T+ +VL A +HSG D F+SM Y+I+P HY
Sbjct: 447 DSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY 506
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
C+V +LSR+G+LS+A +FI+ MP +P + W +LL+G + +IA A L+++
Sbjct: 507 ACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP 566
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
E+ Y +++N+Y AGRW +A VR M GL+K G SW+E + F K
Sbjct: 567 ENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAK 621
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 230/475 (48%), Gaps = 52/475 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ V N MI + N+E A+++FD M ER+ VSW ++ISG+ + G
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG------------- 212
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLK--LLESGVKPNEVTFSSICKACAEINDFRLG 203
SFE K K L S KPN VT S+ +AC + +D G
Sbjct: 213 -------------------SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFG 253
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
L V + + + +S+CN++I K G +D AR++FD M ++D V++ I+ ++
Sbjct: 254 LEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAH 313
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G + EA +F EM +W+ MI+ Q+ + EE FR+M R +PNT S +L
Sbjct: 314 GLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLL 373
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+L L+ G +HA ++ G + +++++ ++ID Y+K G + VFD+ ++
Sbjct: 374 PSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS-- 431
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+++W ++I Y ++G + A LFD M K +DV+ +A++S + D+ +F
Sbjct: 432 -LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIF 490
Query: 440 NEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT--ALTDTY 496
+ ML +I P ++ ++ + L + K+ P D AL +
Sbjct: 491 DSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM-----PIDPIAKVWGALLNGA 545
Query: 497 AKSGDIESSRRVFDR---MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+ GD+E +R DR M +N ++T+M ++G +E+ + +M++ +
Sbjct: 546 SVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGL 600
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 310/584 (53%), Gaps = 57/584 (9%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSF----------------EALKLFLKLLESGVKPNE 184
F +P + I + + GFVQ+ + L LF +L + G+ P+
Sbjct: 57 FCTDPSRGSIRYAERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDN 116
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
T + KA + G V G + K+GF+ VCNS++ + +G++++A+
Sbjct: 117 FTLPPVFKAMGCLGKVVEGEKVHGYVVKSGFD--ACVCNSVMGMYGALGKMEVAK----- 169
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
++FDE+PER+ VSW+V+I+ Y E+A +F
Sbjct: 170 --------------------------KVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVF 203
Query: 305 RQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
R+M R S K + + LSA + L+ G +H +V +E I NAL+D+Y K
Sbjct: 204 RRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYV-DAELEMTTKIGNALLDMYCK 262
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG R +FD + K+V + W SM+ GY NG ++EA+ELF+ P R+ V W+A+I
Sbjct: 263 CGCVDKARAIFDEMGNKNV---ICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMI 319
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+GY++ FD +F +M + P+ ++L A +LE+GK LHG I +
Sbjct: 320 NGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSIT 379
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D +GTAL D YAK G +E + VF M +++ SWT ++ GLA +G ++++ F +M
Sbjct: 380 LDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQM 439
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
E+ P+++T + VL AC+H GLV++G +YF+SM Y I+P HY+C++D+L R+G
Sbjct: 440 EEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGL 499
Query: 604 LSEAEDFINSMPFEPDS---NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
L EAE + +P E + SLLS C+ Y N +++ER + L ++ + + + LL
Sbjct: 500 LDEAELLLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLL 559
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+++YASA RW D VR+ M E G+RK GCS +EV +H F
Sbjct: 560 ASVYASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFM 603
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 179/380 (47%), Gaps = 38/380 (10%)
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+GFD V N ++ G +E A+++FD +PER+ VSW LIS ++ H + E+++ F
Sbjct: 145 SGFDACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFR 204
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
R ES +K +E T S AC+ + + +
Sbjct: 205 R------------------------------MRRESNLKADEATVVSTLSACSVLRNQEV 234
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + A E + N+L+ + K G VD AR++FD M ++V+ WT ++ +
Sbjct: 235 GEEIHRYV-DAELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYAS 293
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G L EAR +F+ P R+ V W+ MI Y Q +EA +LFR+M +P+ +
Sbjct: 294 NGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTL 353
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A AL G +H ++ + I D + AL+D+Y+KCG + VF + E+D
Sbjct: 354 LKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDT 413
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAV 438
A SW S+I G +NG +A + F M + +D+++ +++ +
Sbjct: 414 A---SWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGRRY 470
Query: 439 FNEMLLSGEIPNKSTFSSVL 458
F+ M + +I KS S L
Sbjct: 471 FDSMTKTYKIQPKSEHYSCL 490
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 5/244 (2%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ N +++ + G +++A+ +FD M +N + WT+++SG+ +G ++E+ FER+P ++
Sbjct: 252 IGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRD 311
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
++ WTA I G+VQ EALKLF K+ ++P+ ++ K CA+ G + G
Sbjct: 312 IVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHG 371
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I + V +L+ + K G V+ A VF M++RD SWT ++ G +
Sbjct: 372 YIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSK 431
Query: 269 ARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
A F +M E +++++ ++ N G EE R F MT+ Y +P + +S ++
Sbjct: 432 ALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLI 491
Query: 324 SALA 327
L
Sbjct: 492 DLLC 495
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 295/564 (52%), Gaps = 36/564 (6%)
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
W I + + AL ++ +L + + + S+ KAC +++ +LG + G +
Sbjct: 91 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K G ++ V V N+L+ + + E + AR
Sbjct: 151 LKKGLDRDVFVGNALMLM-------------------------------YGECACVEYAR 179
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+FD+M ER+ VSWS MI +++ + A L R+M +P+ +++ A
Sbjct: 180 LVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTA 239
Query: 331 ALRSGMHVHAHVLKIGIEKD--VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+R G +HA+V++ + V + AL+D+Y+KCG R +F+ + +K V VSW
Sbjct: 240 NMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTV---VSW 296
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+MI G + ++EEA+ LFD+ R+ + W+A++S Y + D F +F++M SG
Sbjct: 297 TAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVR 356
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P K T S+L A +L+ GK +H I K D L TAL D YAK GDI ++ R+
Sbjct: 357 PTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRL 416
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F ++ W ++ G A GY +E++++F EME+ + PN++T + +L ACSH+GLV
Sbjct: 417 FIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLV 476
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+G K F M + + P HY C+VD+L R+G L EA + I SMP +P++ W +L++
Sbjct: 477 TEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVA 536
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ +KN Q+ E A L ++ E+ VL+SNIYA+A RW DA VRK M G++K
Sbjct: 537 ACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE 596
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
G S +EV VH F +P+
Sbjct: 597 PGHSVIEVNGTVHEFLMGDQSHPQ 620
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 224/513 (43%), Gaps = 62/513 (12%)
Query: 39 QGRALHGHLIKTGIHKERYLTTR--------------LLIMYLGSRKSLEANEIVKDLNG 84
Q + +H H+IKT H + ++ Y + A + L
Sbjct: 58 QTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRK 117
Query: 85 FDLVVHNCMINA------NIQWGNLEEAQRLF---DGMPERNEVSWTALISGFMKHGRVE 135
D V N M + + W L + F G+ +R+ AL+ + + VE
Sbjct: 118 MDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGL-DRDVFVGNALMLMYGECACVE 176
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
+ F++ ++V+SW+ I +N AL+L ++ V+P+EV S+ A
Sbjct: 177 YARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFA 236
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSV--CNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
+ + R+G ++ + + +H+ V +L+ + K G + LAR +F+ + ++ VVSW
Sbjct: 237 DTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSW 296
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T ++ I L EAR +FD R+ + W+ M++ Y Q+ ++AF LF QM +
Sbjct: 297 TAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVR 356
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P +LS A AL G VH+++ K +E D ++ AL+D+Y+KCG+ +
Sbjct: 357 PTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRL 416
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F + +D+ WN++I G+ ++G EEA ++F M ++
Sbjct: 417 FIEAISRDIC---MWNAIITGFAMHGYGEEALDIFAEMERQ------------------- 454
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTAL 492
G PN TF +L A + + +GK L K++ G + +
Sbjct: 455 ------------GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCM 502
Query: 493 TDTYAKSGDIESSRRVFDRMPDK-NEISWTVMV 524
D ++G ++ + + MP K N I W +V
Sbjct: 503 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 535
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 146/400 (36%), Gaps = 102/400 (25%)
Query: 40 GRALHGHLIKTGI--HKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
G+A+H ++I+ H TT LL MY A ++ L +V MI
Sbjct: 244 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 303
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
I+ LEEA+ LFD R+ + WTA++S + + ++
Sbjct: 304 IRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCID---------------------- 341
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+A LF ++ SGV+P +VT S+ CA LG V I K E
Sbjct: 342 ---------QAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV 392
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+ +L+ + K G+++ A +F RD+ W I
Sbjct: 393 DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI--------------------- 431
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
I + GY EEA +F +M R KPN F
Sbjct: 432 ----------ITGFAMHGYGEEALDIFAEMERQGVKPNDITF------------------ 463
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK--DVAHVVSWNSMIGGY 395
IG L+ S G +G+ +F+ +V V + + M+
Sbjct: 464 -------IG----------LLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLL 506
Query: 396 GLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
G G ++EA E+ +MP K N + W A+++ HK L
Sbjct: 507 GRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQL 546
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 311/581 (53%), Gaps = 10/581 (1%)
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
++ F+R P + TA F + L L+ ++ +GV + TF + K CA
Sbjct: 56 ALCLFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCAR 115
Query: 197 INDFRLGLSVFGLIFKAGFEKHVS-----VCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
R + + ++ A F + V N +I + +++G AR FD + +D V
Sbjct: 116 ---GRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAV 172
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
+WT ++ ++G L +A + P RN +SW+ +I+ Y+++G EA F M
Sbjct: 173 AWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDG 232
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+P+ +LSA A LK L G +H V + G+ + ALID+Y+KCG+
Sbjct: 233 IEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAW 292
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD++ SWN+MI GY G ++ A+ LFD M R+ V+++++I+GY+ +
Sbjct: 293 EVFDALGRGRRPQ--SWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGR 350
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+F +M + T S+L A AS+ +L +G+ LH I + D++LGTA
Sbjct: 351 LREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTA 410
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D Y K G +E + VF M ++ +W+ M+ GLA +G K ++ F M+ PN
Sbjct: 411 LLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPN 470
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+T +++L ACSHS L+D+G YF M ++NI+P HY C++D+L RSG L EA D +
Sbjct: 471 SVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLV 530
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
+MP +P++ WAS+LS C+ +K+ +A A ++L KL + A YV L NIY + +W
Sbjct: 531 RTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWE 590
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
DA +R+LM E+G++K+ G S + V QVH F +P+
Sbjct: 591 DASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQ 631
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 198/362 (54%), Gaps = 8/362 (2%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+V N +I+ ++ G +A+R FD +P ++ V+WT +ISG K G ++++ +P +
Sbjct: 141 LVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPAR 200
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NVISWT I G+ + G + EA+ F +L G++P+EVT + ACA++ D G S+
Sbjct: 201 NVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLH 260
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDL 266
L+ + G + +LI + K G++ A VFD + + R SW ++D + ++G +
Sbjct: 261 KLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHV 320
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR +FD+M +R+ V+++ +I Y G EA LF QM R+ + + +L+A
Sbjct: 321 DVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTAC 380
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
ASL AL G +HA + + +E D+++ AL+D+Y KCG ++ LVF ++ +DV
Sbjct: 381 ASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVH--- 437
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+W++MI G NG + A E F M + N V++ AI++ D F EM
Sbjct: 438 TWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEM 497
Query: 443 LL 444
L
Sbjct: 498 RL 499
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL S + QGRALH + + + + YL T LL MYL + EA+ + + +
Sbjct: 372 TMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAM 431
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLF------DGMPERNEVSWTALISGFMKHGRVEE 136
+ D+ + MI A + + + +A + DG + N V++ A+++ ++E
Sbjct: 432 SVRDVHTWSAMI-AGLAFNGMGKAALEYFFWMKVDGF-QPNSVTYIAILTACSHSCLLDE 489
Query: 137 SMWYFERNPFQNVIS-----WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
YFE + I + I ++G EA+ L + ++PN V ++SI
Sbjct: 490 GRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTM---PMQPNAVIWASIL 546
Query: 192 KACAEINDFRLG 203
AC D L
Sbjct: 547 SACRVHKDANLA 558
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 250/428 (58%), Gaps = 29/428 (6%)
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F+ VL A A L + G VH V K G E ++F+ N+L+DLY K G + +
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 374 FDSIVEKDVA----------------------------HVVSWNSMIGGYGLNGQMEEAK 405
FD +V +DV ++VSW++MI GY G +EEA+
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEAR 244
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASV 464
+LF+NMP RN VSW+A+I+GY +++++ +F +M G + PN T SVL A A +
Sbjct: 245 QLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHL 304
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+L+ GK +H I + +FLG AL D YAK G + ++ VF M +++ ISW++++
Sbjct: 305 GALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIII 364
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
GLA GYA E+ N F EM + + PN+++ + +L AC+H+GLVDKGL+YF+ M +Y I
Sbjct: 365 MGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGI 424
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P HY CVVD+LSR+GRL +AE INSMP +P+ W +LL GC+ YK+ + ER V
Sbjct: 425 TPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVW 484
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+ +L H V L+N+YAS GR DA + R M + K+ GCSW+E+ N V+ FF
Sbjct: 485 RILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFF 544
Query: 705 QKTDHNPK 712
+P+
Sbjct: 545 MGDSSHPQ 552
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 188/386 (48%), Gaps = 43/386 (11%)
Query: 12 NP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR 70
NP E +F S ++ C L + V++G+ +H + K G ++ L+ +Y
Sbjct: 124 NPDEYTFTSVLKACAGLAQ-------VLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVG 176
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ A ++ ++ D+V N +I+ G +++A+ +FDGM E+N VSW+ +ISG+ +
Sbjct: 177 CNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYAR 236
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSS 189
G +EE+ FE P +NV+SW A I G+ QN +A++LF ++ E G+ PN+VT S
Sbjct: 237 VGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVS 296
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ ACA + LG + I + E + + N+L + K G V A+ VF M +RD
Sbjct: 297 VLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERD 356
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
V+SW++I+ MG +A Y GY EAF F +M
Sbjct: 357 VISWSIII-----MG-----------------------LAMY---GYANEAFNFFAEMIE 385
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETK 368
+PN F +L+A + G+ + ++ GI + ++DL S+ G
Sbjct: 386 DGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLD 445
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGG 394
+ +S+ + +V+ W +++GG
Sbjct: 446 QAESLINSMPMQ--PNVIVWGALLGG 469
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 189/433 (43%), Gaps = 71/433 (16%)
Query: 131 HGRVEESMWYFERN-PFQNVISWTAAICGFVQNGFSFEALKLFLK--LLESGVKPNEVTF 187
HG + S+ F F N+ ++ A + F Q+ + F +L + P+E TF
Sbjct: 71 HGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTF 130
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+S+ KACA + G V + K G E ++ V NSL+ L K+G +A+ +FD M
Sbjct: 131 TSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVV 190
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE-------- 299
RDVVSW ++ + G + +AR +FD M E+N VSWS MI+ Y + G EE
Sbjct: 191 RDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENM 250
Query: 300 -----------------------AFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSG 335
A LFRQM PN VLSA A L AL G
Sbjct: 251 PMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLG 310
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H + + IE +F+ NAL D+Y+KCG + + VF + E+D V+SW+ +I G
Sbjct: 311 KWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERD---VISWSIIIMGL 367
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+ G EA F F EM+ G PN +F
Sbjct: 368 AMYGYANEA-------------------------------FNFFAEMIEDGLEPNDISFM 396
Query: 456 SVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP- 513
+L A ++KG + + ++ G + + D +++G ++ + + + MP
Sbjct: 397 GLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPM 456
Query: 514 DKNEISWTVMVRG 526
N I W ++ G
Sbjct: 457 QPNVIVWGALLGG 469
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 137/308 (44%), Gaps = 68/308 (22%)
Query: 392 IGGYGLNGQMEEAKELFDN-MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
IG +G + + +F++ + N +++A++ + +H + + FN L+ PN
Sbjct: 65 IGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPN 124
Query: 451 KS--TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK---------- 498
TF+SVL A A +A + +G+ +H + K G ++F+ +L D Y K
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 499 ---------------------SGDIESSRRVFDRMPDKNEISWTVMVRGLAE-------- 529
SG ++ +R VFD M +KN +SW+ M+ G A
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEAR 244
Query: 530 ------------------SGYAK-----ESINLFEEME-KTSITPNELTILSVLFACSHS 565
+GYA+ ++I LF +M+ + + PN++T++SVL AC+H
Sbjct: 245 QLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHL 304
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G +D G K+ + I+ + DM ++ G + EA+ + M E D +W+
Sbjct: 305 GALDLG-KWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEM-HERDVISWSI 362
Query: 626 LLSGCKTY 633
++ G Y
Sbjct: 363 IIMGLAMY 370
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 208/684 (30%), Positives = 323/684 (47%), Gaps = 137/684 (20%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ +++GNL +A +F M ER+ SW L+ G+ K G +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFD--------------- 180
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
EAL L+ ++L + ++PN TF S+ K CA ++D G + +
Sbjct: 181 ----------------EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHV 224
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ GFE V V N+LIT+ +K G++ AR +FD+M KRD +SW ++ + E G E
Sbjct: 225 IRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGL 284
Query: 271 RIFDEMPE----------------------------------RNEVSWSV-----MIARY 291
+F M E ++E + +I Y
Sbjct: 285 ELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMY 344
Query: 292 NQSGYPEEAFRLFRQMT-----------------RYSFK--------------PNTSCFS 320
+ G EEA +F +M + FK P+
Sbjct: 345 SSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLV 404
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VLSA A + L G+ +H +K G+ V +SN+LID+YSKC + VF +I K
Sbjct: 405 SVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGK 464
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ VVSW S+I G +N + EA F M +
Sbjct: 465 N---VVSWTSLILGLRINNRSFEALLFFRQMKESMK------------------------ 497
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
PN T SVL A A + +L +GK++H ++ G +D FL A+ D Y + G
Sbjct: 498 --------PNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+ F+ K+ +W +++ G A+ G AK ++ LF++M + I P+E+T +S+L
Sbjct: 550 RKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLC 608
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACS SG+V +GL+YFN M+ YN+ PN +HY CVVD+L R+G+L +A DFI MP PD+
Sbjct: 609 ACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDA 668
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL+ C+ ++N ++ E A K +++ + Y+LL N+YA G W VR LM
Sbjct: 669 AIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLM 728
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFF 704
E+GL GCSWVE++ +VH F
Sbjct: 729 RERGLSADPGCSWVEIKGKVHAFL 752
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 155/299 (51%), Gaps = 17/299 (5%)
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE-KDVAHVVSWNSMIGGYGLNGQM 401
L+I +E+D +I AL+ L +G V++ + K V N+++ + G +
Sbjct: 91 LRIEVEEDAYI--ALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNL 148
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+A +F M +R+ SW+ ++ GY + FD +++ ML + PN TF SVL
Sbjct: 149 LDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTC 208
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A V+ + +GK++H +I+ GF DV +G AL Y K GDI ++R +FD+MP ++ ISW
Sbjct: 209 AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWN 268
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD-----KGLK-YF 575
M+ G E+G E + LF M + S+ P+ +T+ +V AC L+D +G+ Y
Sbjct: 269 AMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE---LLDNERLGRGVHGYV 325
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
E +I N ++ M S GRL EAE + M D +W ++++ ++K
Sbjct: 326 VKSEFGGDISMNNS----LIQMYSSLGRLEEAETVFSRME-SKDVVSWTAMIASLVSHK 379
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 17/192 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L +++G+ +H H ++TG+ + +L +L MY+ + + A L
Sbjct: 502 TLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA------L 555
Query: 83 NGF-----DLVVHNCMINANIQWGNLEEAQRLFDGMPE----RNEVSWTALISGFMKHGR 133
N F D+ N ++ Q G + A LFD M E +E+++ +L+ K G
Sbjct: 556 NQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGM 615
Query: 134 VEESMWYFE--RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
V E + YF +N + + C G + + + + + ++P+ + ++
Sbjct: 616 VTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALL 675
Query: 192 KACAEINDFRLG 203
AC + LG
Sbjct: 676 NACRIHRNVELG 687
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 208/684 (30%), Positives = 323/684 (47%), Gaps = 137/684 (20%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ +++GNL +A +F M ER+ SW L+ G+ K G +
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFD--------------- 180
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
EAL L+ ++L + ++PN TF S+ K CA ++D G + +
Sbjct: 181 ----------------EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHV 224
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ GFE V V N+LIT+ +K G++ AR +FD+M KRD +SW ++ + E G E
Sbjct: 225 IRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGL 284
Query: 271 RIFDEMPE----------------------------------RNEVSWSV-----MIARY 291
+F M E ++E + +I Y
Sbjct: 285 ELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMY 344
Query: 292 NQSGYPEEAFRLFRQMT-----------------RYSFK--------------PNTSCFS 320
+ G EEA +F +M + FK P+
Sbjct: 345 SSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLV 404
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VLSA A + L G+ +H +K G+ V +SN+LID+YSKC + VF +I K
Sbjct: 405 SVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGK 464
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ VVSW S+I G +N + EA F M +
Sbjct: 465 N---VVSWTSLILGLRINNRSFEALLFFRQMKESMK------------------------ 497
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
PN T SVL A A + +L +GK++H ++ G +D FL A+ D Y + G
Sbjct: 498 --------PNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+ F+ K+ +W +++ G A+ G AK ++ LF++M + I P+E+T +S+L
Sbjct: 550 RKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLC 608
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACS SG+V +GL+YFN M+ YN+ PN +HY CVVD+L R+G+L +A DFI MP PD+
Sbjct: 609 ACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDA 668
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL+ C+ ++N ++ E A K +++ + Y+LL N+YA G W VR LM
Sbjct: 669 AIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLM 728
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFF 704
E+GL GCSWVE++ +VH F
Sbjct: 729 RERGLSADPGCSWVEIKGKVHAFL 752
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 155/299 (51%), Gaps = 17/299 (5%)
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE-KDVAHVVSWNSMIGGYGLNGQM 401
L+I +E+D +I AL+ L +G V++ + K V N+++ + G +
Sbjct: 91 LRIEVEEDAYI--ALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNL 148
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+A +F M +R+ SW+ ++ GY + FD +++ ML + PN TF SVL
Sbjct: 149 LDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTC 208
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A V+ + +GK++H +I+ GF DV +G AL Y K GDI ++R +FD+MP ++ ISW
Sbjct: 209 AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWN 268
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD-----KGLK-YF 575
M+ G E+G E + LF M + S+ P+ +T+ +V AC L+D +G+ Y
Sbjct: 269 AMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACE---LLDNERLGRGVHGYV 325
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
E +I N ++ M S GRL EAE + M D +W ++++ ++K
Sbjct: 326 VKSEFGGDISMNNS----LIQMYSSLGRLEEAETVFSRME-SKDVVSWTAMIASLVSHK 379
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 17/192 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L +++G+ +H H ++TG+ + +L +L MY+ + + A L
Sbjct: 502 TLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA------L 555
Query: 83 NGF-----DLVVHNCMINANIQWGNLEEAQRLFDGMPE----RNEVSWTALISGFMKHGR 133
N F D+ N ++ Q G + A LFD M E +E+++ +L+ K G
Sbjct: 556 NQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGM 615
Query: 134 VEESMWYFE--RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
V E + YF +N + + C G + + + + + ++P+ + ++
Sbjct: 616 VTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALL 675
Query: 192 KACAEINDFRLG 203
AC + LG
Sbjct: 676 NACRIHRNVELG 687
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 280/537 (52%), Gaps = 35/537 (6%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EAL+L +L GV PNE T + KAC + L+V G+ K GF V V N+L
Sbjct: 28 EALRLHRCMLRRGVLPNEFTLPFVVKACTRAQAWDNALAVHGVALKLGFVGQVFVANAL- 86
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
L + G LG++RR FDEM RN VSW+
Sbjct: 87 ------------------------------LHSYASAGSLGDSRRFFDEMAGRNVVSWNS 116
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
MI Y Q+G EA LF +M R F + + +L A + L G VH +L G
Sbjct: 117 MIGGYAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSG 176
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
D+ + AL+D+YSKCG+ R F+ + K V VSW SM+ +G ++ A+
Sbjct: 177 SPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSV---VSWTSMLCAQTKHGSVDAARC 233
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
FD+MP+RN VSW+ +IS Y++ Q+ ++ +M G P+++T VL A +
Sbjct: 234 WFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGD 293
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L GK +H I D+ L +L D YAK G ++++ R+F M ++N +SW V++ G
Sbjct: 294 LTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGG 353
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
LA G A ++I F M + + +P+ +T +++L +CSH GL++ G YF SM +YN+K
Sbjct: 354 LAMHGRALDAITFFRSMVRNT-SPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKH 412
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
HY C+VD+L R G L +A I MP +PD W +LL C+ + N +I ++ +K L
Sbjct: 413 EVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQL 472
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+L +VL+SN+ +W D +RKLM E+G RK G S +E+ N +H F
Sbjct: 473 LELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIHEF 529
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 206/412 (50%), Gaps = 22/412 (5%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+ + G + +S +F+ +NV+SW + I G+ Q G + EA LF ++ G
Sbjct: 85 ALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLG 144
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+E T +S+ AC++ + G V L+ +G + + +L+ + K G++ +AR F
Sbjct: 145 DEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCF 204
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ M + VVSWT +L + G + AR FD MPERN VSW+ MI+ Y Q G EA
Sbjct: 205 EMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALD 264
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L++QM + P+ + VLSA + L G VH ++ D+ + N+L+D+Y+
Sbjct: 265 LYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYA 324
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR---NDVSW 419
KCG+ +F + ++ VVSWN +IGG ++G+ +A F +M + + +++
Sbjct: 325 KCGQVDTAIRLFREMCNRN---VVSWNVIIGGLAMHGRALDAITFFRSMVRNTSPDGITF 381
Query: 420 SAIIS-----GYLEHKQ--FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
A++S G LE Q F+ + V+N + E+ + + +L LEK
Sbjct: 382 VALLSSCSHGGLLETGQHYFESMRHVYN---VKHEVEHYACMVDLL---GRRGHLEKAVC 435
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
L I ++ DV + AL G+++ ++V ++ + IS + V
Sbjct: 436 L---IKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFV 484
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 166/375 (44%), Gaps = 68/375 (18%)
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FD + + + V ++ + Y S P EA RL R M R PN V+ A +A
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
+ + VH LK+G VF++NAL+ Y+ G D R FD + ++ VVSWNSM
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRN---VVSWNSM 117
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
IGGY G EA A+F EM G + ++
Sbjct: 118 IGGYAQAGDTREA-------------------------------CALFGEMRRQGFLGDE 146
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV--- 508
T +S+L A + +LE G+ +H ++ G P D+ LG AL D Y+K GD+ +RR
Sbjct: 147 FTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEM 206
Query: 509 ----------------------------FDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
FD MP++N +SW M+ + G E+++L+
Sbjct: 207 MPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLY 266
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKG-LKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
++M+ P+E T++ VL AC G + G + + + I+N P+ ++DM +
Sbjct: 267 KQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHN--PDISLINSLLDMYA 324
Query: 600 RSGRLSEAEDFINSM 614
+ G++ A M
Sbjct: 325 KCGQVDTAIRLFREM 339
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 170/383 (44%), Gaps = 41/383 (10%)
Query: 42 ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL-----NGFDLVVHNCMINA 96
AL G + + G + + T L++ +LE +V L + DL++ +++
Sbjct: 132 ALFGEMRRQGFLGDEF-TLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDM 190
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ G+L A+R F+ MP ++ VSWT+++ KHG V+ + +F+ P +N +SW I
Sbjct: 191 YSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMI 250
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
+VQ G EAL L+ ++ G P+E T + AC I D +G V I
Sbjct: 251 SCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHN 310
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+S+ NSL+ + K G+VD A +F M R+VVSW VI+ G L R D
Sbjct: 311 PDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVII------GGLAMHGRALD-- 362
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
A FR M R + P+ F +LS+ + L +G
Sbjct: 363 -----------------------AITFFRSMVRNT-SPDGITFVALLSSCSHGGLLETGQ 398
Query: 337 HVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
H + + ++ +V ++DL + G + + + K VV W +++G
Sbjct: 399 HYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMK--PDVVVWGALLGAC 456
Query: 396 GLNGQMEEAKELFDNMPKRNDVS 418
++G ++ K++ + + +S
Sbjct: 457 RIHGNVKIGKQVIKQLLELEGIS 479
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 296/543 (54%), Gaps = 20/543 (3%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E + + +A + + RLG +V L+ K H + N L+ L + + + FD
Sbjct: 29 EAVLALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFD 88
Query: 244 RMEKRDVVSWTVILDVFIE-MGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEA 300
+ ++ S+ +L G L +A R+ D MP RN VS++ +I+ + G EA
Sbjct: 89 DLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEA 148
Query: 301 FRLFRQMTRYSFKPNTSC----FSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
R+F Q+ R F++V SA A L+ R +H V+ G+E V ++
Sbjct: 149 LRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMA 208
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NA++D YSK G +D R VFD + +D VSW SMI GY +++A ++FD MP +
Sbjct: 209 NAMVDAYSKAGRVEDARGVFDQMTIRDS---VSWTSMIAGYCRASMLDDAVQVFDMMPAQ 265
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ ++W+A+ISG+ ++ + ++ +F M G +P S L A A V + +GK++H
Sbjct: 266 DAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVH 325
Query: 475 GKIIKLGF---PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
G I++ P++VF+ AL D Y+K GD+ ++ VFDRM +++ ISW MV G + +G
Sbjct: 326 GFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNG 385
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
K+S+ +FE M K + P +T L+VL ACSH+GLV G + SM+ + ++P HY
Sbjct: 386 QGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHY 444
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
+D L R+ +L EA +FI + + + +W +LL C + N +IAE + L++
Sbjct: 445 AAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQ 504
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF-QKT 707
L E+ YV+LSNIY++AG+W DA VR LM KGLRK SW+EV+ H F T
Sbjct: 505 LEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDT 564
Query: 708 DHN 710
H+
Sbjct: 565 SHH 567
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 198/404 (49%), Gaps = 43/404 (10%)
Query: 21 IETCLCLL-KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV 79
+E L LL + I++ ++ G A+H L+KT + L+ RL+ +Y +
Sbjct: 28 VEAVLALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAF 87
Query: 80 KDLNGFDLVVHNCMINANIQW-GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
DL + +N ++ A + G L +A RL DGMP +
Sbjct: 88 DDLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPPAS--------------------- 126
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEV-----TFSSICK 192
+NV+S+ I ++G EAL++F +L + G+ +V T S
Sbjct: 127 --------RNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAAS 178
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
ACA + D R + G + +G E V + N+++ K G V+ AR VFD+M RD VS
Sbjct: 179 ACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVS 238
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
WT ++ + L +A ++FD MP ++ ++W+ +I+ + Q+G E A LF +MT
Sbjct: 239 WTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGV 298
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD---VFISNALIDLYSKCGETKD 369
P L A A + + G VH +L+ I D VFI NALID+YSKCG+
Sbjct: 299 VPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVA 358
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
VFD ++E+D ++SWNSM+ G+ NGQ +++ +F+ M K
Sbjct: 359 AMAVFDRMLERD---IISWNSMVTGFSHNGQGKQSLAVFERMLK 399
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 184/410 (44%), Gaps = 61/410 (14%)
Query: 29 KDITSQNLVIQGRALHGHLIKT-----------GIHKERYLTTRLLIMYLGSR-KSLEAN 76
+++ S N VI A HG + G+ +++ R ++ S L
Sbjct: 127 RNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 77 EIVKDLNG--------FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
+++L+G +++ N M++A + G +E+A+ +FD M R+ VSWT++I+G+
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGY 246
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
+ +++++ F+ P Q+ I+WTA I G QNG AL+LF ++ GV P
Sbjct: 247 CRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALV 306
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEK---HVSVCNSLITLSLKMGEVDLARSVFDRM 245
S ACA++ G V G I + +V + N+LI + K G++ A +VFDRM
Sbjct: 307 SCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM 366
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAF 301
+RD++SW ++ F G ++ +F+ M + V++ ++ + +G +
Sbjct: 367 LERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGR 426
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
R+ M + +P ++ + AL + L E FI L
Sbjct: 427 RILESMQDHGVEPRAEHYAAFIDALGRNRQLE--------------EASEFIKG----LS 468
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
SK G G SW +++G ++G +E A+E+ + +
Sbjct: 469 SKIGLGTTG----------------SWGALLGACHVHGNIEIAEEVAEAL 502
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/630 (28%), Positives = 331/630 (52%), Gaps = 40/630 (6%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI+ + K ++ + F+ P Q W + +++ +AL+L ++ + K
Sbjct: 171 ALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKA 230
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T + +AC ++ G + G + + G + S+CNS++++ + ++LAR+VF
Sbjct: 231 TDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVF 290
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPE 298
D E ++ SW I+ + G L A +F EM + + ++W+ +++ + G E
Sbjct: 291 DSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYE 350
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
R + FKP++ + L A+ L G +H ++++ +E DV++ +L+
Sbjct: 351 NVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLV 410
Query: 359 DLYSKCGETKDGRLVFDSIVEKDV--------------------------------AHVV 386
D+Y K + +VF K++ A +V
Sbjct: 411 DMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLV 470
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+WNS++ GY ++G EEA + + + N VSW+A+ISG +++ + F++M
Sbjct: 471 TWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQM 530
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
PN +T S++L A A + L+KG+++H +K GF D+++ TAL D Y+K G +
Sbjct: 531 QEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKL 590
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ + VF + +K W M+ G A G+ +E LF+ M KT I P+ +T ++L C
Sbjct: 591 KVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGC 650
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+SGLV G KYF+SM+ Y+I P HY+C+VD+L ++G L EA DFI++MP + D++
Sbjct: 651 KNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASI 710
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W ++L+ C+ +K+ +IAE A +NL++L + A YVL+ NIY++ RW D +++ MT
Sbjct: 711 WGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTA 770
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G++ SW++VR +H F + +P+
Sbjct: 771 MGVKIPNVWSWIQVRQTIHVFSTEGKSHPE 800
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/574 (24%), Positives = 251/574 (43%), Gaps = 72/574 (12%)
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
I L S + L A I G + + M+ +++G+ E A ++F RN + W +
Sbjct: 41 IRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNS 100
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ F G G S E L++F +L + GVK +
Sbjct: 101 FLEEFASFG------------------------------GDSHEILEVFKELHDKGVKFD 130
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ + K C + + LG+ V + K GF+ V + +LI L K +D A V
Sbjct: 131 SKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQV-- 188
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
FDE P + + W+ ++ +S E+A L
Sbjct: 189 -----------------------------FDETPLQEDFLWNTIVMANLRSERWEDALEL 219
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
R+M S K +L A L+AL G +H +V++ G + I N+++ +YS+
Sbjct: 220 SRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSR 279
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSW 419
+ R VFDS + ++A SWNS+I Y +NG + A +LF M K + ++W
Sbjct: 280 NNRLELARAVFDSTEDHNLA---SWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITW 336
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
++++SG+L ++ V + +G P+ + +S L A + GK++HG I++
Sbjct: 337 NSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMR 396
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
YDV++ T+L D Y K+ +E + VF +KN +W ++ G G + L
Sbjct: 397 SKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKL 456
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
+M++ I + +T S++ S SG ++ L N ++ + + PN +T ++
Sbjct: 457 LIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSL-GLTPNVVSWTAMISGCC 515
Query: 600 RSGRLSEAEDFINSMPFE---PDSNAWASLLSGC 630
++ ++A F + M E P+S ++LL C
Sbjct: 516 QNENYTDALQFFSQMQEENVKPNSTTISTLLRAC 549
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 151/315 (47%), Gaps = 14/315 (4%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG+++++ + + Y+ T L+ MY+ + +A + ++ N +I+
Sbjct: 387 GKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTY 446
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFER----NPFQNVIS 151
G + A++L M E + V+W +L+SG+ G EE++ R NV+S
Sbjct: 447 KGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVS 506
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
WTA I G QN +AL+ F ++ E VKPN T S++ +ACA + + G +
Sbjct: 507 WTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSM 566
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K GF + + +LI + K G++ +A VF ++++ + W ++ + G E
Sbjct: 567 KHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFT 626
Query: 272 IFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSAL 326
+FD M + + ++++ +++ SG + ++ F M T YS P +S ++ L
Sbjct: 627 LFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLL 686
Query: 327 ASLKALRSGMH-VHA 340
L + +HA
Sbjct: 687 GKAGFLDEALDFIHA 701
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 131/319 (41%), Gaps = 64/319 (20%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL+ +L+ +G +H +K G + Y+ T L+ MY K A+E+ +++
Sbjct: 545 LLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKT 604
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFE 142
L NCM+ +G+ EE LFD M + + +++TAL+SG G V + YF+
Sbjct: 605 LPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFD 664
Query: 143 R-------NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
NP S + G + GF EAL + + K + + ++ AC
Sbjct: 665 SMKTDYSINPTIEHYSCMVDLLG--KAGFLDEALDFIHAMPQ---KADASIWGAVLAACR 719
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
D +K+ E+ AR++F R+E + ++ +
Sbjct: 720 LHKD------------------------------IKIAEI-AARNLF-RLEPYNSANYVL 747
Query: 256 ILDVFIEMGDLGEARRIFDEMPER-----NEVSW-----SVMIARYNQSGYPEEA----- 300
+++++ G+ R+ + M N SW ++ + +PEE
Sbjct: 748 MMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFD 807
Query: 301 -FRLFRQMTRYSFKPNTSC 318
++L ++ + + P+T+C
Sbjct: 808 LYQLISEIKKLGYVPDTNC 826
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/630 (30%), Positives = 326/630 (51%), Gaps = 74/630 (11%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
R V + A I F Q G A++L +S ++ T+ S+ + CA +
Sbjct: 60 RTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTD 117
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V +I ++ L++ G++ R VFD MEK++V W ++ + +
Sbjct: 118 GKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK 177
Query: 263 MGDLGE--------------------ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+GD E A +FD++ +R+ +SW+ MI+ Y +G E
Sbjct: 178 IGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLG 237
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+++QM + + VL A+ L G VH+ +K E+ + SN L+D+YS
Sbjct: 238 IYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYS 297
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG----------QMEE--------- 403
KCG+ VF+ + E++V VSW SMI GY +G QME+
Sbjct: 298 KCGDLDGALRVFEKMGERNV---VSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVA 354
Query: 404 ----------------AKELFDNMPKRNDVS----WSAIISGYLEHKQFDLVFAVFNEML 443
K++ D + N S +A++ Y + + +VF+ M+
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMV 414
Query: 444 LS---------GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+ GE+ P+ T + +L A AS+++LE+GK++HG I++ G+ D + AL
Sbjct: 415 VKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D Y K G + +R +FD +P K+ +SWTVM+ G GY E+I F EM I P+E+
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
+ +S+L+ACSHSGL+++G ++F M+ +NI+P HY C+VD+LSR+G LS+A FI +
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIET 594
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
+P PD+ W +LL GC+ Y + ++AE+ + +++L E+ YVLL+NIYA A + +
Sbjct: 595 LPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEV 654
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+R+ + +KGLRK+ GCSW+E++ +V+ F
Sbjct: 655 KRMREKIGKKGLRKNPGCSWIEIKGRVNLF 684
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 212/484 (43%), Gaps = 106/484 (21%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE---------RNPF----- 146
G+L+E +R+FD M ++N W ++S + K G +ES+ F+ + P
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL 207
Query: 147 ------QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
++VISW + I G+V NG + L ++ +++ G+ + T S+ CA
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT------ 254
LG +V L K+ FE+ ++ N+L+ + K G++D A VF++M +R+VVSWT
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 255 --------------------VILDVF---------IEMGDLGEARRIFDEMPERNEVS-- 283
V LDV G L + + D + N S
Sbjct: 328 TRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL 387
Query: 284 --WSVMIARYNQSGYPEEAFRLFRQMTRYS----------FKPNTSCFSIVLSALASLKA 331
+ ++ Y + G E A +F M KP++ + +L A ASL A
Sbjct: 388 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSA 447
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G +H ++L+ G D ++NAL+DLY KCG RL+FD I KD +VSW M
Sbjct: 448 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD---LVSWTVM 504
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GYG++G EA A FNEM +G P++
Sbjct: 505 IAGYGMHGYGNEA-------------------------------IATFNEMRDAGIEPDE 533
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESSRRVF 509
+F S+L A + LE+G I+K F + L + D +++G++ + +
Sbjct: 534 VSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFI 592
Query: 510 DRMP 513
+ +P
Sbjct: 593 ETLP 596
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 153/368 (41%), Gaps = 85/368 (23%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ + G+L+ A R+F+ M ERN VSWT++I+
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA------------------------ 325
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
G+ ++G+S A+ L ++ + GVK + V +SI ACA G V I
Sbjct: 326 -------GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV--------------- 255
++ VCN+L+ + K G ++ A SVF M +D++SW
Sbjct: 379 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 438
Query: 256 ----------------------------------ILDVFIEMGDLGEARRIFDEMPERNE 281
++D++++ G LG AR +FD +P ++
Sbjct: 439 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 498
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
VSW+VMIA Y GY EA F +M +P+ F +L A + L G +
Sbjct: 499 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-Y 557
Query: 342 VLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
++K IE + ++DL S+ G +++ A + W +++ G +
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI--WGALLCGCRIYH 615
Query: 400 QMEEAKEL 407
+E A+++
Sbjct: 616 DIELAEKV 623
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 137/308 (44%), Gaps = 33/308 (10%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY-----LGSRKSLEANEIVKDLNGFDLVVHN-- 91
G+ +H ++ + ++ L+ MY + S+ + +VKD+ ++ +V
Sbjct: 370 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELK 429
Query: 92 -------CMINANIQWGNLEEAQRLFDGMPERNEVS-----WTALISGFMKHGRVEESMW 139
C++ A LE + + G RN S AL+ ++K G + +
Sbjct: 430 PDSRTMACILPACASLSALERGKEIH-GYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
F+ P ++++SWT I G+ +G+ EA+ F ++ ++G++P+EV+F SI AC+
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 200 FRLGLSVFGLIFKAGF--EKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVI 256
G F I K F E + ++ L + G + A + + D W +
Sbjct: 549 LEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 607
Query: 257 L---DVFIEMGDLGE--ARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRY 310
L ++ ++ +L E A R+F+ PE + V++A Y ++ EE R+ ++ +
Sbjct: 608 LCGCRIYHDI-ELAEKVAERVFELEPE--NTGYYVLLANIYAEAEKREEVKRMREKIGKK 664
Query: 311 SFKPNTSC 318
+ N C
Sbjct: 665 GLRKNPGC 672
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 292/558 (52%), Gaps = 35/558 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F + P + W I G+ Q EA++ + + + N +T+ + KACA I++
Sbjct: 753 FRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISNV 812
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+V + K GF+ + V N+LI +
Sbjct: 813 SC-TTVHARVLKLGFDSDLFVSNALI-------------------------------HGY 840
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+LG AR++FDEM ER+ VSW+ +I Y + E +F +M K +
Sbjct: 841 AGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMV 900
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+ A L + ++ + +E DV++ N LID+Y + R VFD + ++
Sbjct: 901 KVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDR 960
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
++ VSWN+MI GYG G + A++LFD+MP R+ +SW+++IS Y + QF +F
Sbjct: 961 NM---VSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQ 1017
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM+++ P++ T +SVL A A + +L+ G+ +H I K D+++G AL D Y K G
Sbjct: 1018 EMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCG 1077
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+E VF+ M ++ +SWT ++ GLA +G A ++NLF M + + P T + VL
Sbjct: 1078 AVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLL 1137
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
AC+H+G+VDKGL+YF SME +Y + P +HY CVVD+LSRSG L A +FI MP +PD
Sbjct: 1138 ACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDV 1197
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W LLS + + N +AE A K L + + Y+L SN YA + RW D + +R+LM
Sbjct: 1198 VVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLM 1257
Query: 681 TEKGLRKSGGCSWVEVRN 698
E + K S VE+ +
Sbjct: 1258 EESNVHKPSASSSVEIND 1275
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 212/441 (48%), Gaps = 67/441 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL V N +I+ + L A+++FD M ER+ VSW +L
Sbjct: 829 DLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSL--------------------- 867
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
ICG+ + E L +F ++ + VK + VT + AC + ++ + +
Sbjct: 868 ----------ICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDA 917
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I + E V + N+LI + + VDLAR VFDRM R++VSW ++ + + G+
Sbjct: 918 MIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGN 977
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L AR++FD+MP R+ +SW+ MI+ Y+Q+G +A RLF++M KP+ + VLSA
Sbjct: 978 LVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSA 1037
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A + AL G VH ++ K + D+++ NALID+Y KCG + G VF+ + ++D
Sbjct: 1038 CAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRD---S 1094
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW S+I G +NG + A L F+ ML
Sbjct: 1095 VSWTSVIAGLAVNGSADSALNL-------------------------------FSLMLRE 1123
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIES 504
G P TF VL A A ++KG + + ++ G ++ + D ++SG++
Sbjct: 1124 GVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGR 1183
Query: 505 SRRVFDRMP-DKNEISWTVMV 524
+ RMP D + + W +++
Sbjct: 1184 AYEFIKRMPMDPDVVVWRILL 1204
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 184/366 (50%), Gaps = 14/366 (3%)
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A +F ++P W++MI ++Q+ P EA R + M + N + +L A A
Sbjct: 748 KANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACA 807
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+ + S VHA VLK+G + D+F+SNALI Y+ E R VFD + E+D +VS
Sbjct: 808 RISNV-SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERD---LVS 863
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
WNS+I GYG + E +F+ M K + V+ ++ ++ +V A+ E +
Sbjct: 864 WNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMI-EYI 922
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
++ + L S+ DL ++ ++ A+ Y K+G++
Sbjct: 923 EENKVEVDVYLGNTLIDMYGRRSM---VDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLV 979
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
++R++FD MP ++ ISWT M+ +++G +++ LF+EM T + P+E+T+ SVL AC+
Sbjct: 980 AARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACA 1039
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H G +D G + Y++ + ++DM + G + + M + DS +W
Sbjct: 1040 HIGALDVGEAVHEYIRK-YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMG-KRDSVSW 1097
Query: 624 ASLLSG 629
S+++G
Sbjct: 1098 TSVIAG 1103
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 155/333 (46%), Gaps = 40/333 (12%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ + N +I+ + ++ A+R+FD M +RN VSW A+I G+ K G + + F+ P
Sbjct: 930 DVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMP 989
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++VISWT+ I + Q G +A++LF +++ + VKP+E+T +S+ ACA I +G +
Sbjct: 990 HRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEA 1049
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V I K + V N+LI + K G V+ SVF+ M KRD VSWT +
Sbjct: 1050 VHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSV--------- 1100
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
IA +G + A LF M R +P F VL A
Sbjct: 1101 ----------------------IAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLA 1138
Query: 326 LASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLV-FDSIVEKDVA 383
A + G+ + ++ G+ ++ ++DL S+ G GR F + D
Sbjct: 1139 CAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNL--GRAYEFIKRMPMD-P 1195
Query: 384 HVVSWNSMIGGYGLNGQMEEA----KELFDNMP 412
VV W ++ ++G + A K+L + P
Sbjct: 1196 DVVVWRILLSASQVHGNLHLAEIATKKLLETDP 1228
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 193/632 (30%), Positives = 321/632 (50%), Gaps = 99/632 (15%)
Query: 84 GFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
G+D L+V N ++++ + +L A LF M E++ V++ AL++G+ K
Sbjct: 169 GYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSK----------- 217
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
GF+ +A+ LF K+ + G +P+E TF+++ A +++D
Sbjct: 218 --------------------EGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIE 257
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V + K F +V V N+L LD +
Sbjct: 258 FGQQVHSFVVKCNFVWNVFVANAL-------------------------------LDFYS 286
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ + EAR++F EMPE + +S++V+I +G EE+ LFR++ F F+
Sbjct: 287 KHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFAT 346
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+LS A+ L G +H+ +IV
Sbjct: 347 LLSIAANSLNLEMGRQIHSQ----------------------------------AIVTDA 372
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
++ V+ NS++ Y + EA +F ++ ++ V W+A+ISGY++ + +F E
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE 432
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M + + +T++S+L A A++ASL GK LH +II+ G +VF G+AL D YAK G
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGS 492
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
I+ + ++F MP +N +SW ++ A++G ++ FE+M + + PN ++ LS+L A
Sbjct: 493 IKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCA 552
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH GLV++GL+YFNSM +Y ++P HY +VDML RSGR EAE + MPFEPD
Sbjct: 553 CSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEI 612
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKL-AEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W+S+L+ C+ +KN+++A +A L+ + A YV +SNIYA+AG W V+K +
Sbjct: 613 MWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKAL 672
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
E+G+RK SWVE++ + H F +P+
Sbjct: 673 RERGIRKVPAYSWVEIKQKTHVFSANDTSHPQ 704
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 217/460 (47%), Gaps = 42/460 (9%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ K GF+ + N + L+ G++ AR +FD M ++V+S ++ +++ G+L A
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTA 92
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R +FD M +R+ V+W+++I Y Q EAF LF M R+ P+ + +LS
Sbjct: 93 RSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEF 152
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+++ VH HV+K+G + + + N+L+D Y K +F + EKD V++N
Sbjct: 153 ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKD---NVTFN 209
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+++ GY G +A LF M DL F P
Sbjct: 210 ALLTGYSKEGFNHDAINLFFKMQ--------------------DLGFR-----------P 238
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
++ TF++VL A + +E G+ +H ++K F ++VF+ AL D Y+K I +R++F
Sbjct: 239 SEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLF 298
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
MP+ + IS+ V++ A +G +ES+ LF E++ T + ++L ++S ++
Sbjct: 299 YEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLE 358
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
G + +S + + +VDM ++ + EA + + S W +L+SG
Sbjct: 359 MG-RQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQ-SSVPWTALISG 416
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
Y + + E +K E H A S YAS R
Sbjct: 417 ---YVQKGLHEDGLK---LFVEMHRAKIGADSATYASILR 450
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 158/308 (51%), Gaps = 7/308 (2%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L L S K R HV A ++K G + + N + + + G+ R +FD + K+
Sbjct: 16 LGTLTSPK--RHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKN- 72
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
V+S N+MI GY +G + A+ LFD+M +R+ V+W+ +I GY +H +F F +F +M
Sbjct: 73 --VISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G +P+ T +++L S+ + +HG ++K+G+ + + +L D+Y K+ +
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL 190
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ +F M +K+ +++ ++ G ++ G+ ++INLF +M+ P+E T +VL A
Sbjct: 191 GLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAG 250
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
++ G + +S N N ++D S+ R+ EA MP E D +
Sbjct: 251 IQMDDIEFG-QQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP-EVDGIS 308
Query: 623 WASLLSGC 630
+ L++ C
Sbjct: 309 YNVLITCC 316
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 106/260 (40%), Gaps = 41/260 (15%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H I T E + L+ MY K EAN I DL V +I+ +Q
Sbjct: 360 GRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQ 419
Query: 100 WGNLEEAQRLFDGMPE---------------------------------------RNEVS 120
G E+ +LF M N S
Sbjct: 420 KGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFS 479
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+AL+ + K G ++E++ F+ P +N +SW A I + QNG AL+ F +++ SG+
Sbjct: 480 GSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGL 539
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLAR 239
+PN V+F SI AC+ GL F + + E S++ + + G D A
Sbjct: 540 QPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAE 599
Query: 240 SVFDRME-KRDVVSWTVILD 258
+ RM + D + W+ IL+
Sbjct: 600 KLMARMPFEPDEIMWSSILN 619
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 303/566 (53%), Gaps = 38/566 (6%)
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+ + I +++G +AL + ++ ++GV P+ T+ S+ +ACAE + LG +V
Sbjct: 139 LPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMH 198
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
AG + ++ N+L+++ K G++ AR VFD M +RDVVSW ++ + +G EA
Sbjct: 199 AAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEA 258
Query: 270 ----RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
RR+ DE E N V+W+ + Y Q A L R+M R + + I L+A
Sbjct: 259 MELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNA 318
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ + LR G +H +++ ++ +SNALI +Y++C + + R++F + + V
Sbjct: 319 CSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRML---ECPGV 375
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V+WN+M+ + L+ EEA ++F EM+
Sbjct: 376 VTWNTMLSSFALSDCAEEAS-------------------------------SIFREMICR 404
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN T + L A VA+L+ G++LHG I+K GF L +L D Y+KSG + +
Sbjct: 405 GVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVA 464
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+ VFD M D + IS+T M+ G G ++ LFE+M + I P+ + +++VL ACSHS
Sbjct: 465 QNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHS 524
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV +G + FN M Y IKP HY+C++D+ +R+G L +AE+ ++ PF P S WA+
Sbjct: 525 GLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAA 584
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
L+ C N +I ERA + L ++ E+ YVL++N+YA+AG W + VRKLM + G+
Sbjct: 585 LVGACHDRGNIEIGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGV 644
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNP 711
K+ G +W ++ N F NP
Sbjct: 645 TKAPGLAWTDLGNGFTPFLVGDRSNP 670
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 228/532 (42%), Gaps = 96/532 (18%)
Query: 17 FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEAN 76
+N I +CL L +Q A + + K G+ + + +L R EA
Sbjct: 141 YNVLISSCL-------RHGLPLQALAAYQEMGKNGVLPDVFTYPSVL------RACAEAR 187
Query: 77 EIV-----------KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
E+V ++G +L N +++ + G+L A+++FDGM +R+ VSW ++I
Sbjct: 188 ELVLGRAVHMHAAGAGMDG-NLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMI 246
Query: 126 SGFMKHGRVEESMWYFERNPFQ----NVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
S + G+ E+M F R + N ++W G++Q A+ L +++ G +
Sbjct: 247 SSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAE 306
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ VT AC+ + RLG + GL + ++ SV N+LIT+ + +++ AR +
Sbjct: 307 VDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARML 366
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F +E VV+W M++ + S EEA
Sbjct: 367 FRMLECPGVVTWNT-------------------------------MLSSFALSDCAEEAS 395
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+FR+M KPN L+ A + L+ G +H H++K G + + N+LID+Y
Sbjct: 396 SIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMY 455
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SK G + VFD++ + D ++S+ SMI GYG+ G+ A LF+
Sbjct: 456 SKSGRLSVAQNVFDTMDDCD---MISYTSMIAGYGMQGKGTVALRLFE------------ 500
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK-IIKL 480
+M+ SG P+ +VL A + + +G++L K +I
Sbjct: 501 -------------------QMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISY 541
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESG 531
G + + + D YA++G +E + + D P W +V + G
Sbjct: 542 GIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRG 593
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/479 (37%), Positives = 268/479 (55%), Gaps = 34/479 (7%)
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+L A ++F+ +P N ++++I Q+ P +A + +M +PN + +
Sbjct: 79 NLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFK 138
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFIS------------------------------ 354
A + +A G+ VHAHV+K G+ DV I
Sbjct: 139 ACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVIC 198
Query: 355 -NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
NA+ID Y KCGE + + +F S+ +K+V SWN M+ G G +EEA+ELF+ M +
Sbjct: 199 FNAMIDGYLKCGEVEAAKELFWSMEDKNVG---SWNVMVSGMAKCGMIEEARELFNEMKE 255
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
+N++SWSA+I GY++ + VFN M P K SSVL A A++ +L++G+ +
Sbjct: 256 KNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWI 315
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H + +D LGTAL D YAK G ++ + VF++M K +W M+ GL G A
Sbjct: 316 HAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRA 375
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+++I LF +M+K PN +T+L VL AC+HSG+VD+GL+ FNSME +Y I+P HY C
Sbjct: 376 EDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGC 435
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
VVD+L R+G L EAE+ + SMP EP + W +LL C+ + + ++ ER K L +L ++
Sbjct: 436 VVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQN 495
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y LLSNIYA AGRW D NVRKLM E+G++ S G S ++ VH F +P+
Sbjct: 496 SGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQ 554
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 188/404 (46%), Gaps = 42/404 (10%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE P NV + I G +QN +A+ + K++ + +PN+ T+ ++ KAC
Sbjct: 87 FEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAA 146
Query: 201 RLGLSVFGLIFKAGFEKHVSV------------------------------C-NSLITLS 229
G+ V + K G V + C N++I
Sbjct: 147 EEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGY 206
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
LK GEV+ A+ +F ME ++V SW V++ + G + EAR +F+EM E+NE+SWS MI
Sbjct: 207 LKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMID 266
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y + GY +EA +F M R +P S VL+A A+L AL G +HA+V
Sbjct: 267 GYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSF 326
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D + AL+D+Y+KCG VF+ + +K+ V +WN+MI G G++G+ E+A ELF
Sbjct: 327 DAVLGTALVDMYAKCGRLDMAWDVFEKMEKKE---VFTWNAMICGLGMHGRAEDAIELFF 383
Query: 410 NMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM-LLSGEIPNKSTFSSVLCASASV 464
M K+ N ++ ++S D +FN M + G P + V+
Sbjct: 384 KMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRA 443
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
L + +++ + + + AL K GD+E RV
Sbjct: 444 GLLGEAEEV---MYSMPMEPSAAVWGALLGACRKHGDVELGERV 484
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 174/378 (46%), Gaps = 36/378 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE-ANEIVKDLNGF 85
L K T+ +G +H H+IK G+ + ++ + + MY GS +E A ++ +
Sbjct: 136 LFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMY-GSFGEVEGARRMLGEDGNS 194
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D++ N MI+ ++ G +E A+ LF M ++N SW ++SG K G +EE+ F
Sbjct: 195 DVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMK 254
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N ISW+A I G+++ G+ EAL++F + ++P + SS+ ACA + G
Sbjct: 255 EKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRW 314
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + + +L+ + K G +D+A VF++MEK++V
Sbjct: 315 IHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEV--------------- 359
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+W+ MI G E+A LF +M + F+PN VLSA
Sbjct: 360 ----------------FTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSA 403
Query: 326 LASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + G+ + + ++ GIE + ++DL + G + V S+ + A
Sbjct: 404 CAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAA 463
Query: 385 VVSWNSMIGGYGLNGQME 402
V W +++G +G +E
Sbjct: 464 V--WGALLGACRKHGDVE 479
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 297/547 (54%), Gaps = 10/547 (1%)
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS-----VCNSL 225
LF ++ + V+P+ TF + K C+ + R L ++ A + V NSL
Sbjct: 31 LFRRMRRAAVRPDGFTFHFLFK-CSSSSRPRALLCT--MLHAACLRTMLPSAAPFVANSL 87
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + ++G R FD + +D VSWT+++ +MG L +AR + + P R+ +SW+
Sbjct: 88 IHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWT 147
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
+IA Y+++ +EA F+ M P+ VLSA + LK L G +H V +
Sbjct: 148 SLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEK 207
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G+ + ALID+Y+KCG+ R VFD++ SWN++I GY +G ++ A+
Sbjct: 208 GMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQ--SWNAIIDGYCKHGHVDVAR 265
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
LFD M R+ ++++++I+GY+ Q +F M + T S+L A AS+
Sbjct: 266 SLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLG 325
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+L +G+ LH I D+++GTAL D Y K G + + VF RM ++ +WT M+
Sbjct: 326 ALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIA 385
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
GLA +G K + F +M PN ++ ++VL ACSHS L+++G YF+ M +YNI
Sbjct: 386 GLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIH 445
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
P HY C++D+L RSG L EA D + +MP +P+S WAS+LS C+ +K +A+ A ++
Sbjct: 446 PQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEH 505
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
L K+ + A YV L NI + +W DA +R LM E+ ++K+ G S V V QVH F
Sbjct: 506 LLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVV 565
Query: 706 KTDHNPK 712
+P+
Sbjct: 566 SDKSHPR 572
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 183/342 (53%), Gaps = 8/342 (2%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N +I+ + G + +R FD +P ++ VSWT +ISG K G + ++ + P ++
Sbjct: 83 VANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRD 142
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
VISWT+ I + + + EA+ F +L G+ P++VT + AC+++ D LG S+
Sbjct: 143 VISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHL 202
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLG 267
L+ + G ++ +LI + K G+ AR VFD + + R SW I+D + + G +
Sbjct: 203 LVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVD 262
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
AR +FD+M R+ ++++ MI Y SG EA LF M R+ + + +LSA A
Sbjct: 263 VARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACA 322
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
SL AL G +HA + +E D++I AL+D+Y KCG + +VF + ++DV +
Sbjct: 323 SLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVH---A 379
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISG 425
W +MI G NG + E F M + N VS+ A+++
Sbjct: 380 WTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTA 421
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 156/630 (24%), Positives = 276/630 (43%), Gaps = 118/630 (18%)
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V S I GF+++G + A ++ ++ SG++ TFS+I C+ L +
Sbjct: 698 RDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYE----ALQL 753
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + G CN + + +++ ++ +
Sbjct: 754 HGRVLALGL-----CCNPFVG--------------------------SALVNHYMHVESP 782
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN--TSCFSIVLS 324
A +F E+P +N +V++ EE F M R + N + C+++
Sbjct: 783 HAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMK-G 841
Query: 325 ALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ + L G +H VLK G I ++F+SN+L+DLYS G++ D + I+ +D
Sbjct: 842 CYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSED-- 899
Query: 384 HVVSWNSMIGGYGLNGQMEEA----KELF--DNMPK-RNDVSWSAI------------IS 424
V+SWNS++ Y G M+EA K++ MP R+ VS A+ I
Sbjct: 900 -VISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIH 958
Query: 425 GYLE---------HKQ------------FDLVFAVFNE---------------------- 441
G + H Q FD A+FNE
Sbjct: 959 GIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMF 1018
Query: 442 ---------MLLSGEIPNKSTFSSVLCA---SASVASLEKGKDLHGKIIKLGFPYDVFLG 489
M++ G P+ TFS+ + A SAS SL + LH ++KLGF D+ +
Sbjct: 1019 DAALEILHCMIVEGVTPDDVTFSATMKAISLSAS-PSLTSCQMLHSCLVKLGFEMDMAVC 1077
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
++L YA +G + SS +F+ + D N I +T ++ A G ++ LF++M + +
Sbjct: 1078 SSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLK 1137
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+ +T L + C +G+ ++G M + P+ RH+ C+V++LSR G + EA +
Sbjct: 1138 PDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAME 1197
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
+ P + AW+SLL CK + + +RA L + + PA + +SN + G
Sbjct: 1198 MMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGD 1257
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
A+ ++++ K ++KSG S +EV ++
Sbjct: 1258 RETALRIKEMTNVKEVKKSGH-SLIEVSHR 1286
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 20/309 (6%)
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M R+ S + +I+G++ D AV+ M+ SG TFS++L V S +
Sbjct: 694 TMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTIL----GVCSTYE 749
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
LHG+++ LG + F+G+AL + Y ++ +F +P +N V++RGL
Sbjct: 750 ALQLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGN 809
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG-LVDKGLKYFNSMEPIYNIKPNG 588
+E I F +M + + N L+ + C +G +++G + + I N
Sbjct: 810 LKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNI 869
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV----K 644
+VD+ S G + +N + E D +W S+LS Y + + AV +
Sbjct: 870 FLSNSLVDLYSAIGDSVDTVKALNDILSE-DVISWNSILS---MYADRGHMKEAVYYLKQ 925
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
LW +V L + G W + + ++ + G CS V V+ + +
Sbjct: 926 MLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGF----SCSSVHVQTTLIDMY 981
Query: 705 QKT---DHN 710
K DH+
Sbjct: 982 GKCCCFDHS 990
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 33 SQNLVIQGRALHGHL-IKTGIHKE---RYLTT--RLLIMYLGSRKSLEANEIVKDLNGFD 86
S N +I G HGH+ + + + R + T ++ Y+ S + EA + ++ D
Sbjct: 247 SWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHD 306
Query: 87 LVVHN----CMINANIQWGNLEEAQRLFDG----MPERNEVSWTALISGFMKHGRVEESM 138
L V N +++A G L + + L + E + TAL+ +MK GRV E+
Sbjct: 307 LRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEAT 366
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE-- 196
F+R ++V +WTA I G NG L+ F ++ G +PN V++ ++ AC+
Sbjct: 367 IVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSC 426
Query: 197 -INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWT 254
+N+ RL +++ + +I L + G +D A + M + + V W
Sbjct: 427 LLNEGRLYFDEMRILYN--IHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWA 484
Query: 255 VIL 257
IL
Sbjct: 485 SIL 487
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E + ++LI+ + G++ S FE NVI +TA I + G A++LF +
Sbjct: 1071 EMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQ 1130
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
++ SG+KP+ VTF C + F G V L+
Sbjct: 1131 MVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELM 1166
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL S + QGRALH + + + Y+ T LL MY+ + EA + + +
Sbjct: 313 TVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRM 372
Query: 83 NGFDLVVHNCMINANIQWGNLEEA------QRLFDGMPERNEVSWTALISGFMKHGRVEE 136
D+ MI A + + + +A Q DG + N VS+ A+++ + E
Sbjct: 373 GKRDVHAWTAMI-AGLAFNGMGKAGLEYFYQMRCDGF-QPNPVSYIAVLTACSHSCLLNE 430
Query: 137 SMWYFER-----NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
YF+ N + + I ++G EA+ L + ++PN V ++SI
Sbjct: 431 GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTM---PMQPNSVIWASIL 487
Query: 192 KAC 194
AC
Sbjct: 488 SAC 490
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D+ V + +I A G L + +F+G+ + N + +TA+IS ++G +M F++
Sbjct: 1072 MDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQM 1131
Query: 145 PFQNV----ISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSI 190
+ +++ AI G Q G FE +L ++L+ + + P+E F+ +
Sbjct: 1132 VSSGLKPDNVTFLCAIAGCDQAGM-FEEGRLVIELMRASRELDPDERHFACM 1182
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 263/463 (56%), Gaps = 8/463 (1%)
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T ++DV + A +F + + N ++ MI Y + A +++QM +S
Sbjct: 50 TKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHG 109
Query: 314 -----PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
P+ F V+ + A L G VH HV K G + + + N+L+++Y KC
Sbjct: 110 ENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLD 169
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
D VF+ + E+D VSWN++I G+ GQM A+ +F+ M + SW+AI+SGY
Sbjct: 170 DAHKVFEEMTERDA---VSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYAR 226
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ F M + G P++ + SVL A A + +LE GK +H K GF ++ +
Sbjct: 227 IGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICV 286
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL + YAK G I+ RR+FD+M +++ ISW+ M+ GLA G A E+I LF+EM+K I
Sbjct: 287 CNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKI 346
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
PN +T + +L AC+H+GL+++GL+YF SM+ YNI+P HY C+V++L SGRL +A
Sbjct: 347 EPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQAL 406
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ I MP +PDS W SLLS C+++ N +IA A+++L +L YVLLSN+YA G
Sbjct: 407 ELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLG 466
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+W +RKLM K ++K+ GCS +EV N V F D P
Sbjct: 467 KWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKP 509
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 158/297 (53%), Gaps = 8/297 (2%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL----- 176
T ++ H E + F+R N + A I + N A+ ++ ++L
Sbjct: 50 TKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHG 109
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
E+ + P++ TF + K+CA + + LG V G +FK G + + V NSL+ + +K +D
Sbjct: 110 ENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLD 169
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A VF+ M +RD VSW ++ + +G + AR IF+EM ++ SW+ +++ Y + G
Sbjct: 170 DAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGC 229
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+A FR+M +P+ VL A A L AL G +H + K G +++ + NA
Sbjct: 230 YADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNA 289
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
LI++Y+KCG +GR +FD + E+D V+SW++MI G +G+ EA ELF M K
Sbjct: 290 LIEMYAKCGSIDEGRRLFDQMNERD---VISWSTMIVGLANHGRAHEAIELFQEMQK 343
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 163/357 (45%), Gaps = 65/357 (18%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
VV N ++ ++ +L++A ++F+ M ER+ VSW LISG ++ G++ + FE +
Sbjct: 153 VVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDK 212
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+ SWTA + G+ + G +AL+ F ++ G++P+E++ S+ ACA++ LG +
Sbjct: 213 TIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIH 272
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
KAGF +++ VCN+LI + K G +D
Sbjct: 273 FYADKAGFLRNICVCNALIEMYAKCGSID------------------------------- 301
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
E RR+FD+M ER+ +SWS MI G EA LF++M + +PN F +LSA A
Sbjct: 302 EGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACA 361
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L G+ + + D +E V H
Sbjct: 362 HAGLLNEGLRYFESMKR------------------------------DYNIEPGVEH--- 388
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDLVFAVFNEML 443
+ ++ GL+G++++A EL MP + D + W +++S H ++ +L
Sbjct: 389 YGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLL 445
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 160/399 (40%), Gaps = 88/399 (22%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HAH++K + + F+ ++D+ + ET+ L+F + +
Sbjct: 33 IHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVADP----------------- 75
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML--LSGE---IPNKS 452
N ++A+I Y +K + L V+ +ML GE P+K
Sbjct: 76 -----------------NAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKF 118
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS------------- 499
TF V+ + A + + GK +HG + K G + + +L + Y K
Sbjct: 119 TFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEM 178
Query: 500 ------------------GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
G + +R +F+ M DK SWT +V G A G +++ F
Sbjct: 179 TERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFR 238
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDM 597
M+ I P+E++++SVL AC+ G ++ G K+ + Y K CV ++M
Sbjct: 239 RMQMVGIEPDEISLVSVLPACAQLGALELG-KWIH----FYADKAGFLRNICVCNALIEM 293
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA-EEHPAG 656
++ G + E + M E D +W++++ G + A + + K E +
Sbjct: 294 YAKCGSIDEGRRLFDQMN-ERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIIT 352
Query: 657 YVLLSNIYASAG------RWIDAMNVRKLMTEKGLRKSG 689
+V L + A AG R+ ++M R E G+ G
Sbjct: 353 FVGLLSACAHAGLLNEGLRYFESMK-RDYNIEPGVEHYG 390
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 10/220 (4%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K +H I+K FL T + D + E + +F R+ D N + M+R +
Sbjct: 31 KKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKHN 90
Query: 531 GYAKESINLFEEM-----EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
+I ++++M + I P++ T V+ +C+ D G K + + K
Sbjct: 91 KVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLG-KQVHGHVFKFGQK 149
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
N +V+M + L +A M E D+ +W +L+SG + RA
Sbjct: 150 SNTVVENSLVEMYVKCDSLDDAHKVFEEMT-ERDAVSWNTLISG---HVRLGQMRRARAI 205
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
++ ++ + + + YA G + DA+ + M G+
Sbjct: 206 FEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGI 245
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 307/583 (52%), Gaps = 46/583 (7%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TAL +MK + ++ FE P +N+ S I GF +NG+ EAL F ++ +
Sbjct: 72 TALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFR 131
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN VT +S+ ACA + L V L K G E + V +++T+ GE+ LA+ V
Sbjct: 132 PNSVTIASVLPACASV---ELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKV 188
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD+ ILD +N VS++ I+ Q+G P F
Sbjct: 189 FDQ-----------ILD--------------------KNVVSYNAFISGLLQNGAPHLVF 217
Query: 302 RLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+F+ + S + PN+ +LSA + L +R G +H V+KI I D + AL+D+
Sbjct: 218 DVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDM 277
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----ND 416
YSKCG +F I ++V+WNSMI G LNGQ + A ELF+ + +
Sbjct: 278 YSKCGCWHWAYGIF--IELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDS 335
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
+W+ +ISG+ + Q F F++M +G I + + +S+L A +++++L+ GK++HG
Sbjct: 336 ATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGH 395
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM---PDKNEISWTVMVRGLAESGYA 533
I+ D F+ TAL D Y K G +RRVF + PD W M+ G +G
Sbjct: 396 TIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAF-WNAMISGYGRNGKY 454
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+ + +F +M++ + PN T++S+L CSH+G +D+G + F M Y + P H+ C
Sbjct: 455 QSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGC 514
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+VD+L RSGRL EA++ I+ MP E + +ASLL C+ + + + E K L +L +
Sbjct: 515 MVDLLGRSGRLKEAQELIHEMP-EASVSVFASLLGACRHHSDSALGEEMAKKLSELEPQD 573
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEV 696
P +V+LSNIYA GRW D VR++M ++GL+K GCS + V
Sbjct: 574 PTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPPGCSSIGV 616
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 205/426 (48%), Gaps = 70/426 (16%)
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I V NGF EAL L+ KL S V ++ TF + KA A++N G + + K GF
Sbjct: 5 IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 64
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ +L + +K+ + A VF+ M
Sbjct: 65 HLDIYAATALADMYMKLHLLSYALKVFEEM------------------------------ 94
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
P RN S +V I+ ++++GY EA F+Q+ +F+PN+ + VL A AS++
Sbjct: 95 -PHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIASVLPACASVEL---D 150
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
VH +K+G+E D++++ A++ +YS CGE + VFD I++K+ VVS+N
Sbjct: 151 GQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKN---VVSYN------ 201
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTF 454
A ISG L++ LVF VF ++L SGE+PN T
Sbjct: 202 -------------------------AFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTL 236
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP- 513
S+L A + + + G+ +HG ++K+ +D +GTAL D Y+K G + +F +
Sbjct: 237 VSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSG 296
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+N ++W M+ G+ +G + ++ LFE++E + P+ T +++ S G V + K
Sbjct: 297 SRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFK 356
Query: 574 YFNSME 579
+F+ M+
Sbjct: 357 FFHKMQ 362
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 12/249 (4%)
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
++++++ S + +K TF +L ASA + S +G+ LH ++IK GF D++ TAL D
Sbjct: 18 LSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALADM 77
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K + + +VF+ MP +N S V + G + +GY +E++ F+++ + PN +TI
Sbjct: 78 YMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTI 137
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
SVL AC+ L + + + ++ + T VV M S G L A+ + +
Sbjct: 138 ASVLPACASVELDGQ----VHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQI- 192
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA-------G 668
+ + ++ + +SG + K+L + + E P L+S + A + G
Sbjct: 193 LDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFG 252
Query: 669 RWIDAMNVR 677
R I + V+
Sbjct: 253 RQIHGLVVK 261
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 12/262 (4%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP-ERNEVSWTALISGFMKHGRVEE 136
+VK FD +V +++ + G A +F + RN V+W ++I+G M +G+ +
Sbjct: 259 VVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDI 318
Query: 137 SMWYFERNPFQNV----ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
++ FE+ + + +W I GF Q G EA K F K+ +GV + + +S+ +
Sbjct: 319 AVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLR 378
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR--DV 250
AC+ ++ + G + G + + + +LI + +K G LAR VF + + + D
Sbjct: 379 ACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDP 438
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQ 306
W ++ + G A IF++M E N + +++ + +G + ++LF+
Sbjct: 439 AFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKM 498
Query: 307 MTR-YSFKPNTSCFSIVLSALA 327
M R Y P + F ++ L
Sbjct: 499 MNRDYGLNPTSEHFGCMVDLLG 520
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 114/306 (37%), Gaps = 66/306 (21%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
+++ LL+ ++ + + G+ +HGH I+T I + +++T L+ MY+ S A +
Sbjct: 370 LKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF- 428
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
C F P+ + W A+ISG+ ++G+ +
Sbjct: 429 -----------CQ----------------FQIKPD-DPAFWNAMISGYGRNGKYQ----- 455
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
A ++F ++ E V+PN T SI C+ +
Sbjct: 456 --------------------------SAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEI 489
Query: 201 RLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G +F ++ + G ++ L + G + A+ + M + V + +L
Sbjct: 490 DRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLGA 549
Query: 260 FIEMGD--LGE--ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
D LGE A+++ E+ ++ + ++ Y G + R+ M K
Sbjct: 550 CRHHSDSALGEEMAKKL-SELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKP 608
Query: 316 TSCFSI 321
C SI
Sbjct: 609 PGCSSI 614
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 289/526 (54%), Gaps = 20/526 (3%)
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
RLG +V L+ K H + N L+ L + + + FD + ++ S+ +L
Sbjct: 46 RLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAAL 105
Query: 261 IE-MGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
G L +A R+ D MP RN VS++ +I+ + G EA R+F Q+ R
Sbjct: 106 ARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQ 165
Query: 318 C----FSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
F++V SA A L+ R +H V+ G+E V ++NA++D YSK G +D R
Sbjct: 166 VAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDAR 225
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD + +D VSW SMI GY +++A ++FD MP ++ ++W+A+ISG+ ++ +
Sbjct: 226 GVFDQMTIRDS---VSWTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGE 282
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF---PYDVFL 488
++ +F M G +P S L A A V + +GK++HG I++ P++VF+
Sbjct: 283 EEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFI 342
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL D Y+K GD+ ++ VFDRM +++ ISW MV G + +G K+S+ +FE M K +
Sbjct: 343 HNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEV 402
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P +T L+VL ACSH+GLV G + SM+ + ++P HY +D L R+ +L EA
Sbjct: 403 QPTYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNRQLEEAS 461
Query: 609 DFINSMPFE---PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
+FI + + + +W +LL C + N +IAE + L++L E+ YV+LSNIY+
Sbjct: 462 EFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYS 521
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF-QKTDHN 710
+AG+W DA VR LM KGLRK SW+EV+ H F T H+
Sbjct: 522 AAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDTSHH 567
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 194/396 (48%), Gaps = 35/396 (8%)
Query: 25 LCLL-KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN 83
L LL + I++ ++ G A+H L+KT + L+ RL+ +Y + DL
Sbjct: 32 LALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLP 91
Query: 84 GFDLVVHNCMINANIQW-GNLEEAQRLFDGMP--ERNEVSWTALISGFMKHGRVEESMWY 140
+ +N ++ A + G L +A RL DGMP RN VS+ +IS +HGR E++
Sbjct: 92 HKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRV 151
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F + L L + V + T S ACA + D
Sbjct: 152 FAQ-------------------------LARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
R + G + +G E V + N+++ K G V+ AR VFD+M RD VSWT ++ +
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGY 246
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
L +A ++FD MP ++ ++W+ +I+ + Q+G E A LF +MT P
Sbjct: 247 CRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALV 306
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKD---VFISNALIDLYSKCGETKDGRLVFDSI 377
L A A + + G VH +L+ I D VFI NALID+YSKCG+ VFD +
Sbjct: 307 SCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM 366
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+E+D ++SWNSM+ G+ NGQ +++ +F+ M K
Sbjct: 367 LERD---IISWNSMVTGFSHNGQGKQSLAVFERMLK 399
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 184/410 (44%), Gaps = 61/410 (14%)
Query: 29 KDITSQNLVIQGRALHGHLIKT-----------GIHKERYLTTRLLIMYLGSR-KSLEAN 76
+++ S N VI A HG + G+ +++ R ++ S L
Sbjct: 127 RNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 77 EIVKDLNG--------FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
+++L+G +++ N M++A + G +E+A+ +FD M R+ VSWT++I+G+
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGY 246
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
+ +++++ F+ P Q+ I+WTA I G QNG AL+LF ++ GV P
Sbjct: 247 CRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALV 306
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEK---HVSVCNSLITLSLKMGEVDLARSVFDRM 245
S ACA++ G V G I + +V + N+LI + K G++ A +VFDRM
Sbjct: 307 SCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM 366
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAF 301
+RD++SW ++ F G ++ +F+ M + V++ ++ + +G +
Sbjct: 367 LERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGR 426
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
R+ M + +P ++ + AL + L E FI L
Sbjct: 427 RILESMQDHGVEPRAEHYAAFIDALGRNRQLE--------------EASEFIKG----LS 468
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
SK G G SW +++G ++G +E A+E+ + +
Sbjct: 469 SKIGLGTTG----------------SWGALLGACHVHGNIEIAEEVAEAL 502
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 158/353 (44%), Gaps = 46/353 (13%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+++ A+++ R G VHA ++K + +SN L+ LY+ FD +
Sbjct: 32 LALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLP 91
Query: 379 EKDVAHVVSWNSMIGGYGLN-GQMEEAKELFDNMP--KRNDVSWSAIISGYLEHKQFDLV 435
K+ AH S+NS++ G + +A L D MP RN VS++ +IS H +
Sbjct: 92 HKN-AH--SYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEA 148
Query: 436 FAVFNEMLLSGEIPNKSTFS---SVLCASASVASLEKG---KDLHGKIIKLGFPYDVFLG 489
VF ++ + + +V+ A+++ A L ++LHG ++ G V +
Sbjct: 149 LRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMA 208
Query: 490 TALTDTYAKSGDIESSR-------------------------------RVFDRMPDKNEI 518
A+ D Y+K+G +E +R +VFD MP ++ I
Sbjct: 209 NAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDAI 268
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG--LKYFN 576
+WT ++ G ++G + ++ LFE M + P ++S L AC+ GLV +G + F
Sbjct: 269 AWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFI 328
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
I + N + ++DM S+ G + A + M E D +W S+++G
Sbjct: 329 LRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM-LERDIISWNSMVTG 380
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 296/567 (52%), Gaps = 38/567 (6%)
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
++G L L+ + P+ T + + ACA G V + GF +++
Sbjct: 83 EHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLY 139
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ N+L+++ G + AR VFD D VSW IL +++ D+ +A +F MPER
Sbjct: 140 LANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERG 199
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTR---YSFKPNTSCFS----------------- 320
+ S M++ + + G +EA ++F + R +++ SCF
Sbjct: 200 AAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRG 259
Query: 321 -----------IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
V++A A L+ R+G H + G+ + + NALI +YS
Sbjct: 260 EGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVA 319
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
R +FDS D SWNSMI GY NG +++AKELF MP +++VSW+ +ISG +++
Sbjct: 320 ARRLFDSGQCLDQ---FSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQN 376
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
Q +FN M G P++ T SV+ A +++SLE+GK +H I + + V LG
Sbjct: 377 DQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILG 436
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI- 548
T+L D Y K G +ES+ VFD M ++ W ++ GLA +G +S+++F EME +S
Sbjct: 437 TSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTA 496
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
TPNE+T VL AC H+GLV++G +F M+ Y+I PN RHY C+VD+L R+G + EAE
Sbjct: 497 TPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAE 556
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ I SMP PD AW +LL C + + ++ ER + L L H + +LSNIYAS G
Sbjct: 557 NLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEG 616
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVE 695
W ++R M + + K G S VE
Sbjct: 617 MWQHVKDLRGSMKQWHVPKIPGSSVVE 643
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 230/529 (43%), Gaps = 73/529 (13%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L ++ + +GR +H H ++ G + YL L+ MY +A ++ +D
Sbjct: 109 LAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWD 168
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V N ++ A +Q ++++A +F MPER + ++++S F + G V+E+ F+
Sbjct: 169 AVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVER 228
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V +WTA I F +NG EAL LF + G +E + ACA + R G
Sbjct: 229 KDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMC 288
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
GL F+AG ++V N+LI + V AR +FD + D SW ++ +++ G +
Sbjct: 289 HGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSV 348
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A+ +F MP+++ VSW+ MI+ Q+ EA +F M KP+ V+SA
Sbjct: 349 KDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISAC 408
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++ +L G +H ++ + V + +LID+Y KCG + VFD++ E+
Sbjct: 409 TNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTP--- 465
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
WN++I G +NG + ++ ++F M + +
Sbjct: 466 CWNAVIVGLAMNGLVMKSLDMFSEMESSSTAT---------------------------- 497
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN+ TF+ VL A +G +E +
Sbjct: 498 --PNEITFTGVLSAC-----------------------------------RHAGLVEEGQ 520
Query: 507 RVFDRMPDKNEI-----SWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
F M K I + MV L +GY KE+ NL E M + P
Sbjct: 521 HFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVP 569
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 167/396 (42%), Gaps = 42/396 (10%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
+C++ + G HG + G+ + L+ MY + A +
Sbjct: 270 VCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQC 329
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D N MI ++ G++++A+ LF MP+++ VSWT +IS
Sbjct: 330 LDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMIS------------------ 371
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
G VQN S EAL +F + G+KP+EVT S+ AC ++ G
Sbjct: 372 -------------GCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGK 418
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
S+ I + + V + SLI + +K G ++ A VFD ME+R W ++ G
Sbjct: 419 SMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNG 478
Query: 265 DLGEARRIFDEMPER-----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSC 318
+ ++ +F EM NE++++ +++ +G EE F+ M +Y PN
Sbjct: 479 LVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRH 538
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ ++ L ++ ++ + + + DV AL+ K G+ + G V +V
Sbjct: 539 YGCMVDLLGRAGYVKEAENL---IESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLV 595
Query: 379 EKDVAHVVSWNSMIGG-YGLNGQMEEAKELFDNMPK 413
D H +++M+ Y G + K+L +M +
Sbjct: 596 NLD-PHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQ 630
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 257/450 (57%), Gaps = 4/450 (0%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L+ + ++G +A+++F+ + + VSW+ +I+ Y + P +AF +F + +P+
Sbjct: 294 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD 353
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ C +SA K L +G VH V + + D + NALID+YS+ G + VF
Sbjct: 354 SFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFK 413
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
++ KDV+ SW S++ G+ +E A+ +FD MP RN VSW+A+I+GY++ +
Sbjct: 414 TMEIKDVS---SWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPG 470
Query: 436 FAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F EM G + P T +VL A + + + G +HG + K DV + AL D
Sbjct: 471 LELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMD 530
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAKSG + + ++F MP ++ SWT M+ GLA G ++ F +M K+ PNE+T
Sbjct: 531 MYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVT 590
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+LSVL ACSH+GLV +G F M + IKP +HY C+VD+L R+G L EA++ I M
Sbjct: 591 LLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHM 650
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P +PDS W SLLS C + N +AE A K + +L + Y+LL NIY SA RW DA+
Sbjct: 651 PIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDAL 710
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
RK M ++ ++K GCSWVEV VH F
Sbjct: 711 KARKAMRDRRVKKKPGCSWVEVNGVVHEFL 740
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 181/382 (47%), Gaps = 41/382 (10%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+NP +++SWT I ++ +A +F L SG++P+ AC D
Sbjct: 315 QNP--DIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSN 372
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V G++F+ V N+LI + + G +++A SVF ME +DV SWT +L+ FI+
Sbjct: 373 GRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIK 432
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK--PNTSCFS 320
D+ ARRIFDEMP RN VSW+ MI Y Q P LF++M R K P
Sbjct: 433 CNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEM-RAEGKDWPTVITIV 491
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VLS A + A G VH +V K ++ DV ++NAL+D+Y+K G +F + ++
Sbjct: 492 AVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKR 551
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D V SW +MI G L+G+ A E F +M K
Sbjct: 552 D---VFSWTTMISGLALHGKGTHALEAFSDMSK--------------------------- 581
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKS 499
SG PN+ T SVL A + + +G+ L K+++ G + + D ++
Sbjct: 582 ----SGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRA 637
Query: 500 GDIESSRRVFDRMPDK-NEISW 520
G + ++ + + MP K + + W
Sbjct: 638 GLLREAKELIEHMPIKPDSVIW 659
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 22/413 (5%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
TCL L TSQ + ++ HL +G+ + + + G RK L IV +
Sbjct: 323 TCLISLYLHTSQP--CKAFSIFSHLFHSGLRPDSFCVVGA-VSACGHRKDLSNGRIVHGM 379
Query: 83 N-----GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
G D +V N +I+ + G +E A +F M ++ SWT+L++GF+K +E +
Sbjct: 380 VFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAA 439
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAE 196
F+ P +N +SWTA I G+VQ L+LF ++ G P +T ++ CA+
Sbjct: 440 RRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCAD 499
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
I F LG SV G + K + V+V N+L+ + K G + LA +F M KRDV SWT +
Sbjct: 500 IGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTM 559
Query: 257 LDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YS 311
+ G A F +M + NEV+ +++ + +G E LF++M + +
Sbjct: 560 ISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHG 619
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK--- 368
KP + ++ L LR + H + I+ D I +L+ G
Sbjct: 620 IKPKIQHYGCMVDLLGRAGLLREAKELIEH---MPIKPDSVIWRSLLSACLVHGNLALAE 676
Query: 369 -DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD-NMPKRNDVSW 419
G+++ + + D +++ WN ++ K + D + K+ SW
Sbjct: 677 MAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSW 729
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGF--PYDVFLGTALTDTYAKSGDIESSRR 507
N TF +L SLEK K +HGK + LG L L +TY + G +++
Sbjct: 253 NTQTFYFLL---QKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 309
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF+ + + + +SWT ++ + ++ ++F + + + P+ ++ + AC H
Sbjct: 310 VFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKD 369
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ G + + M + + + ++DM SRSG + A +M + D ++W SLL
Sbjct: 370 LSNG-RIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIK-DVSSWTSLL 427
Query: 628 SG 629
+G
Sbjct: 428 NG 429
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 190/552 (34%), Positives = 296/552 (53%), Gaps = 41/552 (7%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+ L LF +L G+ P+ T + K+ + G V G K G E VCNSL+
Sbjct: 13 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLM 72
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ +G++++ ++FDEMPER+ VSW+
Sbjct: 73 GMYAALGKMEITH-------------------------------KVFDEMPERDVVSWNG 101
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
+I+ Y G E+A +F++M+R S K + LSA + LK L G ++ +V+
Sbjct: 102 LISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVV-T 160
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
E V NAL+D++ KCG R +FDS+ +K+V W SM+ GY NG+ +EA+
Sbjct: 161 EFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVK---CWTSMVSGYVSNGRTDEAR 217
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
ELF+ P ++ V W+A+++GY++ +FD +F M + P+ S+L A
Sbjct: 218 ELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTG 277
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+LE+GK +HG I + D +GTAL D YAK G IE++ VF M +++ SWT ++
Sbjct: 278 ALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIY 337
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
GLA +G + +++L+ EME + +++T ++VL ACSH G V +G + F SM + I+
Sbjct: 338 GLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQ 397
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN---AWASLLSGCKTYKNEQIAERA 642
P HY+C++D+L R+G L EAE+ I+ M E D + SLLS + Y N +IAER
Sbjct: 398 PKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAERV 457
Query: 643 VKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHF 702
+ L K+ + + LL+++YASA RW D NVR+ M + G+RK GCS +EV H
Sbjct: 458 AEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGVSHE 517
Query: 703 FFQKTD--HNPK 712
F D +PK
Sbjct: 518 FIVGNDPSSHPK 529
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 226/503 (44%), Gaps = 81/503 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK I VI+G +HG+ +KTG+ + Y+ L+ MY
Sbjct: 36 VLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLMGMYAA------------------ 77
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G +E ++FD MPER+ VSW LIS ++ HGR E+++ F+R
Sbjct: 78 -------------LGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMS- 123
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
ES +K +E T S AC+ + + +G +
Sbjct: 124 -----------------------------RESNLKADEGTIVSTLSACSVLKNLEIGERI 154
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ + FE V N+L+ + K G +D AR++FD M ++V WT ++ ++ G
Sbjct: 155 YRYVVTE-FEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRT 213
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EAR +F+ P ++ V W+ M+ Y Q +EA LFR M +P+ +L+
Sbjct: 214 DEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGC 273
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A AL G +H ++ + + D + AL+D+Y+KCG + VF + E+D A
Sbjct: 274 AQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTA--- 330
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQF-----DLVFA 437
SW S+I G NG A +L+ M + +D+++ A+++ H F + ++
Sbjct: 331 SWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTA-CSHGGFVAEGRRIFYS 389
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTY 496
+ + + + S +LC + + E+ D +HG+ K P L +A +
Sbjct: 390 MTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNY- 448
Query: 497 AKSGDIESSRRVFDRMPDKNEIS 519
G+++ + RV +++ +K E+S
Sbjct: 449 ---GNVKIAERVAEKL-EKVEVS 467
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 126/264 (47%), Gaps = 15/264 (5%)
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
E K F V A+F E+ G P+ T VL + + + +G+ +HG +K G D +
Sbjct: 7 ESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSY 66
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ +L YA G +E + +VFD MP+++ +SW ++ G +++I++F+ M + S
Sbjct: 67 VCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRES 126
Query: 548 -ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ +E TI+S L ACS ++ G + + + + + + R +VDM + G L +
Sbjct: 127 NLKADEGTIVSTLSACSVLKNLEIGERIYRYV--VTEFEMSVRTGNALVDMFCKCGCLDK 184
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL----SN 662
A +SM + + W S++SG ++ +L E P V+L N
Sbjct: 185 ARAIFDSMR-DKNVKCWTSMVSG-------YVSNGRTDEARELFERSPVKDVVLWTAMMN 236
Query: 663 IYASAGRWIDAMNVRKLMTEKGLR 686
Y R+ +A+ + + M +R
Sbjct: 237 GYVQFNRFDEALELFRCMQTARIR 260
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 287/583 (49%), Gaps = 70/583 (12%)
Query: 128 FMKHGRVEESMWYFER--NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
+ K G + ++ F +P NV++WT I ++ F+AL F ++ +G+ PN
Sbjct: 142 YAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHF 201
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
TFS+I ACA G + LI K F
Sbjct: 202 TFSAILPACAHAALLSEGQQIHALIHKHCF------------------------------ 231
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
D T +LD++ + G + A +FDEMP RN VSW+ MI + ++ A +FR
Sbjct: 232 -LNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFR 290
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
++ S P+ S VLSA A L L G VH ++K G+ V++ N
Sbjct: 291 EV--LSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKN---------- 338
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
S++ Y G E+A +LF R+ V+W+ +I G
Sbjct: 339 ------------------------SLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMG 374
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
+ F+ F M+ G P+++++SS+ ASAS+A+L +G +H ++K G +
Sbjct: 375 CFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKN 434
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+ ++L Y K G + + +VF + N + WT M+ + G A E+I LFEEM
Sbjct: 435 SRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLN 494
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P +T +SVL ACSH+G +D G KYFNSM ++NIKP HY C+VD+L R GRL
Sbjct: 495 EGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLE 554
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EA FI SMPFEPDS W +LL C + N ++ + L+KL ++P Y+LLSNIY
Sbjct: 555 EACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYI 614
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
G +A VR+LM G+RK GCSW++V+N+ F F D
Sbjct: 615 RHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRT-FVFNAND 656
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 216/521 (41%), Gaps = 87/521 (16%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF+ P S N + T L+ ++ N Q + TGI+ + + +L
Sbjct: 154 LFNTYPHPSTN--VVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACA 211
Query: 68 GSRKSLEANEIVKDLNGF----DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
+ E +I ++ D V +++ + G++ A+ +FD MP RN VSW +
Sbjct: 212 HAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNS 271
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ I GFV+N A+ +F ++L G P+
Sbjct: 272 M-------------------------------IVGFVKNKLYGRAIGVFREVLSLG--PD 298
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+V+ SS+ ACA + + G V G I K G V V NSL+ + K G + A +F
Sbjct: 299 QVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFC 358
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEAR-RIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
RDVV+W V++ +G R R F E+A
Sbjct: 359 GGGDRDVVTWNVMI--------MGCFRCRNF------------------------EQACT 386
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F+ M R +P+ + +S + A AS+ AL G +H+HVLK G K+ IS++L+ +Y
Sbjct: 387 YFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYG 446
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV----S 418
KCG D VF E + VV W +MI + +G EA +LF+ M V +
Sbjct: 447 KCGSMLDAYQVFRETKEHN---VVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYIT 503
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKI 477
+ +++S + D F FN M I P ++ ++ V LE+ I
Sbjct: 504 FVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRF---I 560
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM----PD 514
+ F D + AL K ++E R V +R+ PD
Sbjct: 561 ESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPD 601
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 69/370 (18%)
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
P EV++ + + QSG P+ F Q +S P+ +L+ A LK+L+
Sbjct: 69 PMSREVAFWLQLFTSYQSGVPK-----FHQ---FSSVPD---LKHLLNNAAKLKSLKHAT 117
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H+ ++ + N L+ LY+KCG L+F++ +VV+W ++I
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPST-NVVTWTTLI---- 172
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
N R++ + A+ FN M +G PN TFS+
Sbjct: 173 -------------NQLSRSNKPFQAL--------------TFFNRMRTTGIYPNHFTFSA 205
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+L A A A L +G+ +H I K F D F+ TAL D YAK G + + VFD MP +N
Sbjct: 206 ILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRN 265
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS-----------HS 565
+SW M+ G ++ +I +F E+ S+ P++++I SVL AC+ H
Sbjct: 266 LVSWNSMIVGFVKNKLYGRAIGVFREV--LSLGPDQVSISSVLSACAGLVELDFGKQVHG 323
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
+V +GL + +Y +K + +VDM + G +A + D W
Sbjct: 324 SIVKRGL-----VGLVY-VKNS------LVDMYCKCGLFEDATKLFCGGG-DRDVVTWNV 370
Query: 626 LLSGCKTYKN 635
++ GC +N
Sbjct: 371 MIMGCFRCRN 380
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 159/361 (44%), Gaps = 49/361 (13%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K + + + + L G + V N +++ + G E+A +LF G +R+ V+W +I G +
Sbjct: 319 KQVHGSIVKRGLVGL-VYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFR 377
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
E++ YF+ ++ GV+P+E ++SS+
Sbjct: 378 CRNFEQACTYFQ-------------------------------AMIREGVEPDEASYSSL 406
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
A A I G + + K G K+ + +SL+T+ K G + A VF ++ +V
Sbjct: 407 FHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNV 466
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEM------PERNEVSWSVMIARYNQSGYPEEAFRLF 304
V WT ++ VF + G EA ++F+EM PE +++ +++ + +G ++ F+ F
Sbjct: 467 VCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEY--ITFVSVLSACSHTGKIDDGFKYF 524
Query: 305 RQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
M ++ KP ++ ++ L + L + + E D + AL+ K
Sbjct: 525 NSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRF---IESMPFEPDSLVWGALLGACGK 581
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL-----FDNMPKRNDVS 418
+ GR V + + + + + ++ + Y +G +EEA E+ + + K + S
Sbjct: 582 HANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCS 641
Query: 419 W 419
W
Sbjct: 642 W 642
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 296/529 (55%), Gaps = 46/529 (8%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGE 268
+F+ E+ + + ++IT LK G + AR +FDR + K++VV+WT +++ +I+ + E
Sbjct: 23 VFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKE 82
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A R+F EMP RN VSW+ M+ Y ++G ++A LFR+M + N ++ +++AL
Sbjct: 83 AERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMP----ERNVVSWNTIITALVQ 138
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ + + ++DV ++ +K G +D R +FD + V +VVSW
Sbjct: 139 CGRIEDAQRLFDQMK----DRDVVSWTTMVAGLAKNGRVEDARALFDQM---PVRNVVSW 191
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKR-------------------------------NDV 417
N+MI GY N +++EA +LF MP+R N +
Sbjct: 192 NAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVI 251
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGK 476
+W+A+++GY++H + VF +ML + E+ PN TF +VL A + +A L +G+ +H
Sbjct: 252 TWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQM 311
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR--MPDKNEISWTVMVRGLAESGYAK 534
I K F + +AL + Y+K G++ ++R++FD + ++ ISW M+ A GY K
Sbjct: 312 ISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGK 371
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E+INLF EM++ + N++T + +L ACSH+GLV++G KYF+ + +I+ HY C+
Sbjct: 372 EAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACL 431
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+ R+GRL EA + I + E W +LL+GC + N I + + + K+ ++
Sbjct: 432 VDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNA 491
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
Y LLSN+YAS G+W +A NVR M + GL+K GCSW+EV N V F
Sbjct: 492 GTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVF 540
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 252/531 (47%), Gaps = 68/531 (12%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++V M+N I++ ++EA+RLF MP RN VSW ++ G+ ++G ++++ F R P
Sbjct: 63 NVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMP 122
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SW I VQ G +A +LF ++ + V + + K + D R
Sbjct: 123 ERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKN-GRVEDAR---- 177
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+F ++V N++IT + +D A +F RM +RD+ SW ++ FI+ G+
Sbjct: 178 ---ALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGE 234
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLS 324
L A ++F EM E+N ++W+ M+ Y Q G EEA R+F + + KPNT F VL
Sbjct: 235 LNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLG 294
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS--IVEKDV 382
A + L L G +H + K + + +ALI++YSKCGE R +FD + ++D
Sbjct: 295 ACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRD- 353
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAV 438
++SWN MI Y +G +EA LF+ M + NDV++ +++ + F
Sbjct: 354 --LISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKY 411
Query: 439 FNEMLLSGEIPNKSTFSSV---LCASASV--------------------ASLEKGKDLHG 475
F+E+L + I + + LC A +L G ++HG
Sbjct: 412 FDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHG 471
Query: 476 ----------KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN--------- 516
KI+K+ P + + L++ YA G + + V RM D
Sbjct: 472 NADIGKLVAEKILKIE-PQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSW 530
Query: 517 -EISWTVMVRGLAESGYAK-ESI-----NLFEEMEKTSITPNELTILSVLF 560
E+ TV V + + +++ E + +L +M+K P++ ++SV F
Sbjct: 531 IEVGNTVQVFVVGDKPHSQYEPLGHLLHDLHTKMKKAGDMPDDDLLVSVEF 581
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 307/597 (51%), Gaps = 69/597 (11%)
Query: 120 SWTALISGFMKHGRVEESMWY--FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
S LI+ + G + Y F +V++W + + FV + AL+ + ++LE
Sbjct: 12 SLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71
Query: 178 -SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
S P+ TF S+ K CA + +F++G + G + K
Sbjct: 72 RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKY----------------------- 108
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
M D+ T +L+++ GDL AR +F+ M RN+V W+ MI+ Y ++
Sbjct: 109 --------MLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
P EA L+++M F P+ + ++SA A LK L GM +H+H+ ++ ++ + +A
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
L+++Y+KCG+ K A+++FD + ++
Sbjct: 221 LVNMYAKCGDLK----------------------------------TARQVFDQLSDKDV 246
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHG 475
+WSA+I GY+++ + +F E+ + PN+ T +V+ A A + LE G+ +H
Sbjct: 247 YAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHD 306
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
I + + V L +L D ++K GDI++++R+FD M K+ ISW MV GLA G +E
Sbjct: 307 YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGRE 366
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
++ F M+ T + P+E+T + VL ACSH+GLV +G K F +E +Y ++ HY C+V
Sbjct: 367 ALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMV 426
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
D+L R+G L+EA +FI MP +PD W S+L C+ Y N ++ E A + L +L +
Sbjct: 427 DLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDG 486
Query: 656 GYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
Y+LLSNIYA W + VR+LM EKG++K+ GCS V + N H F +P+
Sbjct: 487 VYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPE 543
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 74/446 (16%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
LE + V D F ++ C + + G + Q + M + T L++ + G
Sbjct: 70 LERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQ-VVKYMLHSDLYIETTLLNMYAACG 128
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
++ + + FER +N + WT+ I G+++N EAL L+ K+ E G P+EVT +++
Sbjct: 129 DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVS 188
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
ACAE+ D +G+ + I E + +C V
Sbjct: 189 ACAELKDLGVGMKLHSHIR----EMDMKIC---------------------------AVL 217
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS- 311
+ +++++ + GDL AR++FD++ +++ +WS +I Y ++ EA +LFR++ S
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSN 277
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+PN V+SA A L L +G VH ++ + V ++N+LID++SKCG+ +
Sbjct: 278 MRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK 337
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+FDS+ KD ++SWNSM+ G L+G EA
Sbjct: 338 RIFDSMSYKD---LISWNSMVNGLALHGLGREA--------------------------- 367
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT- 490
A F+ M + P++ TF VL A + +++GK L +I L Y V L +
Sbjct: 368 ----LAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEAL---YGVRLKSE 420
Query: 491 ---ALTDTYAKSGDIESSRRVFDRMP 513
+ D ++G + +R MP
Sbjct: 421 HYGCMVDLLCRAGLLAEAREFIRVMP 446
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 152/312 (48%), Gaps = 44/312 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMY---------------LGSRKSL----------- 73
G+ LHG ++K +H + Y+ T LL MY +G R +
Sbjct: 98 GKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMK 157
Query: 74 -----EANEIVKDL--NGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERN----EVS 120
EA + K + +GF D V +++A + +L +L + E + V
Sbjct: 158 NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVL 217
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SG 179
+AL++ + K G ++ + F++ ++V +W+A I G+V+N S EAL+LF ++ S
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSN 277
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
++PNEVT ++ ACA++ D G V I + VS+ NSLI + K G++D A+
Sbjct: 278 MRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK 337
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSG 295
+FD M +D++SW +++ G EA F M + +E+++ ++ + +G
Sbjct: 338 RIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAG 397
Query: 296 YPEEAFRLFRQM 307
+E +LF ++
Sbjct: 398 LVQEGKKLFYEI 409
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 229/834 (27%), Positives = 388/834 (46%), Gaps = 182/834 (21%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL---- 58
+S R LF P+TS +D+ + N ++ H + G H R L
Sbjct: 678 SSARKLFDTTPDTS------------RDLVTWNAILSA---HADKARDGFHLFRLLRRSF 722
Query: 59 --TTRLLIMYLGSRKSLEAN-EIVKDLNGF--------DLVVHNCMINANIQWGNLEEAQ 107
TR + + L A+ + L+G+ D+ V ++N ++G + EA+
Sbjct: 723 VSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREAR 782
Query: 108 RLFDGMPERNEVSWTALISGFMKHGRVEESMWYF------------------------ER 143
LFDGM R+ V W ++ ++ G E++ F ++
Sbjct: 783 VLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQ 842
Query: 144 NPFQ-----------------------NVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
N + +VI+W + F+Q G ++EA+ F+ ++ S V
Sbjct: 843 NVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRV 902
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ +TF + A +N LG + G++ ++G ++ VSV N LI + +K G V AR+
Sbjct: 903 ACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRART 962
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VF +M + D+ VSW+ MI+ SG E +
Sbjct: 963 VFWQMNEVDL-------------------------------VSWNTMISGCALSGLEECS 991
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASL-KALRSGMHVHAHVLKIGIEKDVFISNALID 359
+F + R P+ + VL A +SL +HA +K G+ D F+S LID
Sbjct: 992 VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLID 1051
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF----DNMPKRN 415
+YSK G+ ++ +F V +D + SWN+M+ GY ++G +A L+ ++ + N
Sbjct: 1052 VYSKSGKMEEAEFLF---VNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108
Query: 416 DVSWSA-------------------------------IISG----YLEHKQFDLVFAVFN 440
++ + +ISG YL+ + + +FN
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 441 EM----------LLSGEI---------------------PNKSTFSSVLCASASVASLEK 469
E+ ++SG + P++ TF++++ A + + +LE+
Sbjct: 1169 EIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQ 1228
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
G+ +H +KL +D F+ T+L D YAK G+IE +R +F R SW M+ GLA+
Sbjct: 1229 GRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQ 1288
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
G A+E++ FEEM+ +TP+ +T + VL ACSHSGLV + + F SM+ IY I+P
Sbjct: 1289 HGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIE 1348
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
HY+C+VD LSR+GR+ EAE I+SMPFE ++ + +LL+ C+ + + +R + L L
Sbjct: 1349 HYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLAL 1408
Query: 650 AEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
A YVLLSN+YA+A +W + + R +M + ++K G SWV+++N+VH F
Sbjct: 1409 EPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLF 1462
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 202/431 (46%), Gaps = 71/431 (16%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPE--RNEVSWSVMIARYNQSGYPEEAFRLFRQM------ 307
++ ++ + G L AR++FD P+ R+ V+W+ +++ + + F LFR +
Sbjct: 667 LITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKA--RDGFHLFRLLRRSFVS 724
Query: 308 -TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
TR++ P F + L + AS A S +H + +KIG++ DVF++ AL+++Y+K G
Sbjct: 725 ATRHTLAP---VFKMCLLS-ASPSAAES---LHGYAVKIGLQWDVFVAGALVNIYAKFGR 777
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK---RND------- 416
++ R++FD + +DV V WN M+ Y G EA LF + R D
Sbjct: 778 IREARVLFDGMGLRDV---VLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTL 834
Query: 417 -------------------------------------VSWSAIISGYLEHKQFDLVFAVF 439
++W+ +S +L+ + F
Sbjct: 835 ARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCF 894
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+M+ S + TF +L A + LE GK +HG +++ G V +G L + Y K+
Sbjct: 895 VDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKT 954
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G + +R VF +M + + +SW M+ G A SG + S+ +F ++ + + P++ T+ SVL
Sbjct: 955 GSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVL 1014
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE-DFINSMPFEP 618
ACS G ++ + + T ++D+ S+SG++ EAE F+N F
Sbjct: 1015 RACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGF-- 1072
Query: 619 DSNAWASLLSG 629
D +W +++ G
Sbjct: 1073 DLASWNAMMHG 1083
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
FSI+ A+A+ L G HA +L G D F++N LI +YSKCG R +FD+
Sbjct: 630 FSILRHAIAA-SDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+ R+ V+W+AI+S + + + F +
Sbjct: 689 DT--------------------------------SRDLVTWNAILSAHADKARDG--FHL 714
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F + S + T + V AS + LHG +K+G +DVF+ AL + YAK
Sbjct: 715 FRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAK 774
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G I +R +FD M ++ + W VM++ ++G E++ LF E +T + P+++T+ ++
Sbjct: 775 FGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTL 834
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD- 514
S+L + + + L GK H +I+ G D FL L Y+K G + S+R++FD PD
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 515 -KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
++ ++W ++ A+ A++ +LF + ++ ++ T+ V C
Sbjct: 691 SRDLVTWNAILSAHADK--ARDGFHLFRLLRRSFVSATRHTLAPVFKMC 737
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 304/555 (54%), Gaps = 40/555 (7%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N + W I +V NG EAL + +++ GV+P+ T+ S+ KAC E D G V
Sbjct: 106 NPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVH 165
Query: 208 GLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I A G ++ V NSL+++ K GE+D AR +F++M +RD VSW I+ + G
Sbjct: 166 ESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLW 225
Query: 267 GEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
EA +F+EM E N ++W+ + Q+ + A L QM R + I
Sbjct: 226 KEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIG 285
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A + + A++ G +HA ++ + + NALI +YS+C KD+
Sbjct: 286 LGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRC---------------KDL 330
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
H A LF ++ ++ +W++++SGY + + +F EM
Sbjct: 331 RH-------------------ADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREM 371
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGD 501
L SG PN T +S+L A VA+L++GK+ H I++ GF + L +L + YA+SG
Sbjct: 372 LFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGK 431
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ S++RVFD + ++++++T ++ G G K ++ LF+EM K I P+++T+++VL A
Sbjct: 432 VLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSA 491
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSHSGLV +G F M +Y I P H++C+VD+ R+G L++A+ I SMP+ P +
Sbjct: 492 CSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTA 551
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
WA+L+ C+ + N +I E A + L ++ E+P YVL++N++A+AGRW VR M
Sbjct: 552 MWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMR 611
Query: 682 EKGLRKSGGCSWVEV 696
+ G+RK+ GC+WV+V
Sbjct: 612 DLGVRKAPGCTWVDV 626
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 198/447 (44%), Gaps = 72/447 (16%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
++L VHN +++ ++G L+ A+RLF+ MPER+ VSW +IS + G +E+ FE
Sbjct: 176 WNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEM 235
Query: 145 PFQ----NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
N+I+W G VQ AL+L ++ + + V AC+ I
Sbjct: 236 RLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAI 295
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+LG + ++ F+ +V N+LIT+ + ++ A +F ++ + + +W +L +
Sbjct: 296 KLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGY 355
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
M +R+ EEA LFR+M +PN +
Sbjct: 356 THM--------------DRS-----------------EEASFLFREMLFSGIEPNYVTIA 384
Query: 321 IVLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+L A + L+ G H ++++ G E + + N+L+++Y++ G+ + VFDS+
Sbjct: 385 SILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRR 444
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+D V++ S+I GYG+ G+ + A +LFD M K
Sbjct: 445 RD---KVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIK---------------------- 479
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAK 498
P++ T +VL A + + +G L K+ L G V + + D + +
Sbjct: 480 ---------PDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGR 530
Query: 499 SGDIESSRRVFDRMPDKNEIS-WTVMV 524
+G + +++V MP + + W +V
Sbjct: 531 AGLLNKAKKVITSMPYRPTTAMWATLV 557
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 39/291 (13%)
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCF----SIVLSALASLKALRSGMHVHAHVLKIGIE 348
+ G+ +AF F + ++ N S +L + +LK+L G +HAH + +G E
Sbjct: 14 RKGHLLKAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFE 73
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
+ + L+ YS D + V D+ + + WN +I Y NG EA
Sbjct: 74 NHLVLVPKLVTFYSSFSLLADAHTI---TVNSDIVNPLPWNLLISSYVNNGLHGEA---- 126
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
+ + EM+ G P+ T+ SVL A L+
Sbjct: 127 ---------------------------LSAYREMVHKGVRPDNFTYPSVLKACGEKLDLD 159
Query: 469 KGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
G+++H I G +++++ +L Y K G+++++RR+F++MP+++ +SW ++
Sbjct: 160 FGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNY 219
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
A G KE+ LFEEM N +T ++ C + L+ + M
Sbjct: 220 ASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQM 270
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 16/221 (7%)
Query: 436 FAVFNEMLLSGEIPNKS----TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
F F+ + L N+ + SS+L + ++ SL +GK LH I LGF + L
Sbjct: 22 FETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPK 81
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L Y+ + + + N + W +++ +G E+++ + EM + P+
Sbjct: 82 LVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPD 141
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
T SVL AC +D G + S+ Y + N + +V M + G L A
Sbjct: 142 NFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLF 201
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
N MP E D+ +W N I+ A + LWK A E
Sbjct: 202 NQMP-ERDAVSW-----------NGIISNYASRGLWKEAFE 230
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 296/567 (52%), Gaps = 38/567 (6%)
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
++G L L+ + P+ T + + ACA G V + GF +++
Sbjct: 83 EHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLY 139
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ N+L+++ G + AR VFD D VSW IL +++ D+ +A +F MPER
Sbjct: 140 LANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERG 199
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTR---YSFKPNTSCFS----------------- 320
+ S M++ + + G +EA ++F + R +++ SCF
Sbjct: 200 AAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRG 259
Query: 321 -----------IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
V++A A L+ R+G H + G+ + + NALI +YS
Sbjct: 260 EGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVA 319
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
R +FDS D SWNSMI GY NG +++AKELF MP +++VSW+ +ISG +++
Sbjct: 320 ARRLFDSGQCLDQ---FSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQN 376
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
Q +FN M G P++ T SV+ A +++SLE+GK +H I + + V LG
Sbjct: 377 DQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILG 436
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI- 548
T+L D Y K G +ES+ VFD M ++ W ++ GLA +G +S+++F EME +S
Sbjct: 437 TSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTA 496
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
TPNE+T VL AC H+GLV++G +F M+ Y+I PN RHY C+VD+L R+G + EAE
Sbjct: 497 TPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAE 556
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ I SMP PD AW +LL C + + ++ ER + L L H + +LSNIYAS G
Sbjct: 557 NLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEG 616
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVE 695
W ++R M + + K G S VE
Sbjct: 617 MWQHVKDLRGSMKQWHVPKIPGSSVVE 643
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 230/529 (43%), Gaps = 73/529 (13%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L ++ + +GR +H H ++ G + YL L+ MY +A ++ +D
Sbjct: 109 LAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWD 168
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V N ++ A +Q ++++A +F MPER + ++++S F + G V+E+ F+
Sbjct: 169 AVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVER 228
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V +WTA I F +NG EAL LF + G +E + ACA + R G
Sbjct: 229 KDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMC 288
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
GL F+AG ++V N+LI + V AR +FD + D SW ++ +++ G +
Sbjct: 289 HGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSV 348
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A+ +F MP+++ VSW+ MI+ Q+ EA +F M KP+ V+SA
Sbjct: 349 KDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISAC 408
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++ +L G +H ++ + V + +LID+Y KCG + VFD++ E+
Sbjct: 409 TNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTP--- 465
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
WN++I G +NG + ++ ++F M + +
Sbjct: 466 CWNAVIVGLAMNGLVMKSLDMFSEMESSSTAT---------------------------- 497
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN+ TF+ VL A +G +E +
Sbjct: 498 --PNEITFTGVLSAC-----------------------------------RHAGLVEEGQ 520
Query: 507 RVFDRMPDKNEI-----SWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
F M K I + MV L +GY KE+ NL E M + P
Sbjct: 521 HFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVP 569
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 167/396 (42%), Gaps = 42/396 (10%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
+C++ + G HG + G+ + L+ MY + A +
Sbjct: 270 VCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQC 329
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D N MI ++ G++++A+ LF MP+++ VSWT +IS
Sbjct: 330 LDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMIS------------------ 371
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
G VQN S EAL +F + G+KP+EVT S+ AC ++ G
Sbjct: 372 -------------GCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGK 418
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
S+ I + + V + SLI + +K G ++ A VFD ME+R W ++ G
Sbjct: 419 SMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNG 478
Query: 265 DLGEARRIFDEMPER-----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSC 318
+ ++ +F EM NE++++ +++ +G EE F+ M +Y PN
Sbjct: 479 LVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRH 538
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ ++ L ++ ++ + + + DV AL+ K G+ + G V +V
Sbjct: 539 YGCMVDLLGRAGYVKEAENL---IESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLV 595
Query: 379 EKDVAHVVSWNSMIGG-YGLNGQMEEAKELFDNMPK 413
D H +++M+ Y G + K+L +M +
Sbjct: 596 NLD-PHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQ 630
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 283/536 (52%), Gaps = 33/536 (6%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L L+L L +G + +F + KA ++++ LGL + GL K GF
Sbjct: 100 LSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFH----------- 148
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
D + ++ ++ G + +AR +FD+M R+ V+W++MI
Sbjct: 149 -------------------ADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMI 189
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
Y+Q+ + + +L+ +M +P+ VLSA A L G +H + G
Sbjct: 190 DGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFR 249
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
I +L+++Y+ CG R V+D + K H+V +M+ GY G +++A+ +F
Sbjct: 250 VGSHIQTSLVNMYANCGAMHLAREVYDQLPSK---HMVVSTAMLSGYAKLGMVQDARFIF 306
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
D M +++ V WSA+ISGY E Q +FNEM +P++ T SV+ A A+V +L
Sbjct: 307 DRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALV 366
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
+ K +H K GF + + AL D YAK G++ +R VF+ MP KN ISW+ M+ A
Sbjct: 367 QAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFA 426
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G A +I LF M++ +I PN +T + VL+ACSH+GLV++G K+F+SM + I P
Sbjct: 427 MHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQR 486
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY C+VD+ R+ L +A + I +MPF P+ W SL+S C+ + ++ E A L +
Sbjct: 487 EHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLE 546
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L +H V+LSNIYA RW D VRKLM KG+ K CS +EV N+VH F
Sbjct: 547 LEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFM 602
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 207/408 (50%), Gaps = 23/408 (5%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALI+ + GR+ ++ + F++ ++V++W I G+ QN LKL+ ++ SG +
Sbjct: 155 SALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTE 214
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ + ++ ACA + G ++ I GF + SL+ + G + LAR V
Sbjct: 215 PDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREV 274
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
+D++ + +V T +L + ++G + +AR IFD M E++ V WS MI+ Y +S P EA
Sbjct: 275 YDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEAL 334
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+LF +M R P+ V+SA A++ AL +H + K G + + I+NALID+Y
Sbjct: 335 QLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMY 394
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN------ 415
+KCG R VF+++ K+ V+SW+SMI + ++G + A LF M ++N
Sbjct: 395 AKCGNLVKAREVFENMPRKN---VISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGV 451
Query: 416 ---DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
V ++ +G +E Q ++ NE +S P + + ++ L K +
Sbjct: 452 TFIGVLYACSHAGLVEEGQ-KFFSSMINEHRIS---PQREHYGCMVDLYCRANHLRKAME 507
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIE----SSRRVFDRMPDKN 516
L I + FP +V + +L G+IE ++ R+ + PD +
Sbjct: 508 L---IETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHD 552
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 194/444 (43%), Gaps = 89/444 (20%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A +F +P + ++ ++++ PE L+ + R F + F +L A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 326 LASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
++ L AL G+ +H K G D FI +ALI +Y+ CG D R +FD + +D
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRD--- 181
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
VV+WN MI GY N +D V ++ EM
Sbjct: 182 VVTWNIMIDGYSQNA-------------------------------HYDHVLKLYEEMKT 210
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP--------------------- 483
SG P+ +VL A A +L GK +H I GF
Sbjct: 211 SGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHL 270
Query: 484 ----YD------VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
YD + + TA+ YAK G ++ +R +FDRM +K+ + W+ M+ G AES
Sbjct: 271 AREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQP 330
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG--------LKYFNSMEPIYNIK 585
E++ LF EM++ I P+++T+LSV+ AC++ G + + F PI N
Sbjct: 331 LEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINN-- 388
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
++DM ++ G L +A + +MP + +W+S+++ + + A+ A+
Sbjct: 389 -------ALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGD---ADSAIAL 437
Query: 646 LWKLAEEH--PAGYVLLSNIYASA 667
++ E++ P G + +YA +
Sbjct: 438 FHRMKEQNIEPNGVTFIGVLYACS 461
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 156/321 (48%), Gaps = 21/321 (6%)
Query: 76 NEIVKDLNGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
++ +KD NGF + H ++N G + A+ ++D +P ++ V TA++SG+ K G
Sbjct: 240 HQFIKD-NGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGM 298
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
V+++ + F+R ++++ W+A I G+ ++ EAL+LF ++ + P+++T S+ A
Sbjct: 299 VQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISA 358
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
CA + + K GF + + + N+LI + K G + AR VF+ M +++V+SW
Sbjct: 359 CANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISW 418
Query: 254 TVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-T 308
+ +++ F GD A +F M E+ N V++ ++ + +G EE + F M
Sbjct: 419 SSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMIN 478
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI--DLYSKC-- 364
+ P + ++ LR M + IE F N +I L S C
Sbjct: 479 EHRISPQREHYGCMVDLYCRANHLRKAMEL--------IETMPFPPNVIIWGSLMSACQN 530
Query: 365 -GETKDGRLVFDSIVEKDVAH 384
GE + G ++E + H
Sbjct: 531 HGEIELGEFAATRLLELEPDH 551
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L ++ + ++Q + +H + K G + + L+ MY ++A E+ +++
Sbjct: 351 TMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENM 410
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESM 138
+++ + MINA G+ + A LF M E+ N V++ ++ G VEE
Sbjct: 411 PRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQ 470
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFS-FEALKLFLKLLES-GVKPNEVTFSSICKACAE 196
+F ++ IS G + + + L+ ++L+E+ PN + + S+ AC
Sbjct: 471 KFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQN 530
Query: 197 INDFRLG 203
+ LG
Sbjct: 531 HGEIELG 537
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 257/451 (56%), Gaps = 3/451 (0%)
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+E +L AR +FD + N V W+ MI Y+ S PEEA L+ QM +S N F
Sbjct: 56 MEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFP 115
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+L A ++L AL +H ++K G +V+ +N+L+ +Y+ G K ++FD + +
Sbjct: 116 FLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSR 175
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D+ VSWN+MI GY G +E A ++F MP++N +SW+++I G++ +
Sbjct: 176 DI---VSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQ 232
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+ML++G P+K T S L A A + +LE+GK +H I K D LG AL D Y K G
Sbjct: 233 QMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCG 292
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+++ + VF ++ K +WT ++ G A G E+++ F +M+K I P T +VL
Sbjct: 293 EMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLT 352
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSH+GLV++G F SM YN+KP HY C+VD+L R+G L EA++F+ SMP +P++
Sbjct: 353 ACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNA 412
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W SLL+ C +K+ ++ + K L +L EH Y+ L++I+A+AG W +A VR +
Sbjct: 413 AIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHI 472
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
KGL GCS + + H FF + +P
Sbjct: 473 KNKGLLNLPGCSTITLNGVAHEFFAGAEPHP 503
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 157/617 (25%), Positives = 247/617 (40%), Gaps = 144/617 (23%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
+ +HG L+K G + + +RLL Y A++++
Sbjct: 28 KQIHGQLLKKGTIRHKLTVSRLLTTY-----------------------------ASMEF 58
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
NL A+ +FD + N V W +I + EE
Sbjct: 59 SNLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEE------------------------ 94
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
AL L+ ++L + N TF + KAC+ ++ + I K GF V
Sbjct: 95 -------ALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVY 147
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
NSL+ + G + A +FD + RD+VSW ++D +I+ G++ A +IF MPE+N
Sbjct: 148 ATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKN 207
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
+SW+ MI + ++G +EA L +QM KP+ S LSA A L AL G +H
Sbjct: 208 VISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHT 267
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
++ K I+ D + ALID+Y KCGE K LVF + +K V +W ++IGG+ ++G+
Sbjct: 268 YIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKC---VYTWTAIIGGFAVHGK 324
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
EA + F M K +G P TF++VL A
Sbjct: 325 GSEALDWFTQMQK-------------------------------AGIKPTSFTFTAVLTA 353
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ +E+GK L ES ++ P +
Sbjct: 354 CSHTGLVEEGKSL----------------------------FESMSTFYNMKPVMEH--Y 383
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC---SHSGLVDKGLKYFNS 577
MV L +G+ KE+ E M I PN S+L AC H L + K+
Sbjct: 384 GCMVDLLGRAGFLKEAKEFVESM---PIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIE 440
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
++P + +GR Y + + + +G EA + + + N L GC T
Sbjct: 441 LDP----EHDGR-YIHLASIHAAAGEWDEASQVRSHIKNKGLLN-----LPGCSTITLNG 490
Query: 638 IAERAVKNLWKLAEEHP 654
+A + AE HP
Sbjct: 491 VAHE----FFAGAEPHP 503
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 174/393 (44%), Gaps = 39/393 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK ++ + + + +H +IK G E Y T LL +Y S A+ + L D
Sbjct: 117 LLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRD 176
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V N MI+ I+ GN+E A ++F MPE+N +SWT++I G
Sbjct: 177 IVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVG------------------- 217
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
FV+ G EAL L ++L +G+KP+++T S ACA + G +
Sbjct: 218 ------------FVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWI 265
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I K + + +LI + +K GE+ A VF ++EK+ V +WT I+ F G
Sbjct: 266 HTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKG 325
Query: 267 GEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSI 321
EA F +M + +++ ++ + +G EE LF M T Y+ KP +
Sbjct: 326 SEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGC 385
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
++ L L+ V + I+ + I +L++ + G+ + ++E D
Sbjct: 386 MVDLLGRAGFLKEAKEF---VESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELD 442
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
H + + + G+ +EA ++ ++ +
Sbjct: 443 PEHDGRYIHLASIHAAAGEWDEASQVRSHIKNK 475
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 296/543 (54%), Gaps = 20/543 (3%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E + + +A + + RLG +V L+ K H + N L+ L + + + FD
Sbjct: 29 EAVLALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFD 88
Query: 244 RMEKRDVVSWTVILDVFIE-MGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEA 300
+ ++ S+ +L G L +A R+ D MP RN VS++ +I+ + G EA
Sbjct: 89 DLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEA 148
Query: 301 FRLFRQMTRYSFKPNTSC----FSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
R+F Q+ R F++V SA A L+ R +H V+ G+E V ++
Sbjct: 149 LRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMA 208
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NA++D YSK G +D R +FD + +D VSW SMI GY +++A ++FD MP +
Sbjct: 209 NAMVDAYSKAGRVEDARGLFDQMTIRDS---VSWTSMIAGYCRASMLDDAVQVFDMMPAQ 265
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ ++W+A+ISG+ ++ + ++ +F M G +P S L A A V + +GK++H
Sbjct: 266 DAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVH 325
Query: 475 GKIIKLGF---PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
G I++ P++VF+ AL D Y+K GD+ ++ VFDRM +++ ISW MV G + +G
Sbjct: 326 GFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNG 385
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
K+S+ +FE M K + P +T L+VL ACSH+GLV G + SM+ + ++P HY
Sbjct: 386 QGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHY 444
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
+D L R+ +L EA +FI + + + +W +LL C + N +IAE + L++
Sbjct: 445 AAFIDALGRNHQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQ 504
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF-QKT 707
L E+ YV+LSNIY++AG+W DA VR LM KGLRK SW+EV+ H F T
Sbjct: 505 LEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDT 564
Query: 708 DHN 710
H+
Sbjct: 565 SHH 567
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 196/404 (48%), Gaps = 43/404 (10%)
Query: 21 IETCLCLL-KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV 79
+E L LL + I++ ++ G A+H L+KT + L+ RL+ +Y +
Sbjct: 28 VEAVLALLERAISAGDVRRLGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAF 87
Query: 80 KDLNGFDLVVHNCMINANIQW-GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
DL + +N ++ A + G L +A RL DGMP +
Sbjct: 88 DDLPHKNAHSYNSLLAALARGRGTLPDALRLLDGMPPAS--------------------- 126
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL------ESGVKPNEVTFSSICK 192
+NV+S+ I ++G EAL++F +L + V + T S
Sbjct: 127 --------RNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAAS 178
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
ACA + D R + G + +G E V + N+++ K G V+ AR +FD+M RD VS
Sbjct: 179 ACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVS 238
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
WT ++ + L +A ++FD MP ++ ++W+ +I+ + Q+G E A LF +MT
Sbjct: 239 WTSMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGV 298
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD---VFISNALIDLYSKCGETKD 369
P L A A + + G VH +L+ I D VFI NALID+YSKCG+
Sbjct: 299 VPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVA 358
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
VFD ++E+D ++SWNSM+ G+ NGQ +++ +F+ M K
Sbjct: 359 AMAVFDRMLERD---IISWNSMVTGFSHNGQGKQSLAVFERMLK 399
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 183/410 (44%), Gaps = 61/410 (14%)
Query: 29 KDITSQNLVIQGRALHGHLIKT-----------GIHKERYLTTRLLIMYLGSR-KSLEAN 76
+++ S N VI A HG + G+ +++ R ++ S L
Sbjct: 127 RNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASACAGLRDA 186
Query: 77 EIVKDLNG--------FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
+++L+G +++ N M++A + G +E+A+ LFD M R+ VSWT++I+G+
Sbjct: 187 RHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGY 246
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
+ +++++ F+ P Q+ I+WTA I G QNG AL+LF ++ GV P
Sbjct: 247 CRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALV 306
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEK---HVSVCNSLITLSLKMGEVDLARSVFDRM 245
S ACA++ G V G I + +V + N+LI + K G++ A +VFDRM
Sbjct: 307 SCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRM 366
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAF 301
+RD++SW ++ F G ++ +F+ M + V++ ++ + +G +
Sbjct: 367 LERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGR 426
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
R+ M + +P ++ + AL L E FI L
Sbjct: 427 RILESMQDHGVEPRAEHYAAFIDALGRNHQLE--------------EASEFIKG----LS 468
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
SK G G SW +++G ++G +E A+E+ + +
Sbjct: 469 SKIGLGTTG----------------SWGALLGACHVHGNIEIAEEVAEAL 502
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 308/590 (52%), Gaps = 67/590 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + K G ++ + F + +S+ I G+ NG + EA++LF+++ G KP+
Sbjct: 181 LLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPS 240
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ TF+++ A ++D G + G + K F ++V V N+ + D
Sbjct: 241 DFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFL----------------D 284
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
K D V+ E R++F+EMPE + VS++V+I Y G +E+ L
Sbjct: 285 FYSKHDCVN---------------EVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDL 329
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F+++ +F F +LS AS L+ G +HA V+ + D +SN+L+D+Y+K
Sbjct: 330 FQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAK 389
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C G+ EEA +F + R+ V W+A+I
Sbjct: 390 C----------------------------------GKFEEADRIFLRLSSRSTVPWTAMI 415
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
S ++ + +F EM + +++TF+ VL ASA++AS+ GK LH +I+ GF
Sbjct: 416 SANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF- 474
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+V+ G AL D YA I+ + + F+ M ++N ++W ++ A++G K ++ FEEM
Sbjct: 475 MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEM 534
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ P+ ++ L +L ACSH LV++GLKYFN M +YN+ P HYT +VD L RSGR
Sbjct: 535 IMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGR 594
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL-AEEHPAGYVLLSN 662
EAE + MPFEPD W S+L+ C+ +KN +A +A L+ + A YV +SN
Sbjct: 595 FDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSN 654
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
I+A AG+W + V+K M ++G+RK SWVE++++VH F D +P+
Sbjct: 655 IFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQ 704
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 230/501 (45%), Gaps = 72/501 (14%)
Query: 69 SRKSLEA---NEIVKDLNGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
SR++L+ IVK GFD + N MI + G L +A++L D MP RN S
Sbjct: 22 SRQTLQTCIDARIVK--TGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDI 79
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+ISG++K G + + F+ + V++WT I + ++ +A KLF ++ SG +P+
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
VT+ ++ C ++ + I K G + VCN+L
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTL------------------ 181
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
LD + + G L ARR+F EM + VS++VMI Y +G EEA L
Sbjct: 182 -------------LDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIEL 228
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M FKP+ F+ V+SA L G +H V+K ++VF+ NA +D YSK
Sbjct: 229 FVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSK 288
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
+ R +F+ + E D VS+N +I Y G+++E+ +LF
Sbjct: 289 HDCVNEVRKLFNEMPELD---GVSYNVIITAYAWVGKVKESIDLFQ-------------- 331
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+L F F+ F ++L +AS L+ G+ LH +++
Sbjct: 332 ---------ELQFTTFDR--------KNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMAD 374
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D + +L D YAK G E + R+F R+ ++ + WT M+ + G + + LF EM
Sbjct: 375 PDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEM 434
Query: 544 EKTSITPNELTILSVLFACSH 564
+ +++ ++ T VL A ++
Sbjct: 435 RRANVSADQATFACVLKASAN 455
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 195/399 (48%), Gaps = 35/399 (8%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
I K GF+ S N +I + G++ AR + D+M R+ S +I+ +++ G+L A
Sbjct: 34 IVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVA 93
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
RRIFD+ ER V+W+ MI Y++S +AF+LF +M R +P+ + +L+ L
Sbjct: 94 RRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDL 153
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ + HA ++K+G + + N L+D Y K G R +F + D VS+N
Sbjct: 154 EVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDS---VSFN 210
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
MI GY NG EEA EL F EM G P
Sbjct: 211 VMITGYANNGLNEEAIEL-------------------------------FVEMQNLGFKP 239
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ TF++V+ AS + G+ +HG ++K F +VF+G A D Y+K + R++F
Sbjct: 240 SDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLF 299
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+ MP+ + +S+ V++ A G KESI+LF+E++ T+ ++L + S +
Sbjct: 300 NEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQ 359
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
G + ++ + P+ R +VDM ++ G+ EA+
Sbjct: 360 MG-RQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEAD 397
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 307/583 (52%), Gaps = 46/583 (7%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TAL +MK + ++ FE P +N+ S I GF +NG+ EAL F ++ +
Sbjct: 132 TALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFR 191
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN VT +S+ ACA + L V L K G E + V +++T+ GE+ LA+ V
Sbjct: 192 PNSVTIASVLPACASV---ELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKV 248
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD+ ILD +N VS++ I+ Q+G P F
Sbjct: 249 FDQ-----------ILD--------------------KNVVSYNAFISGLLQNGAPHLVF 277
Query: 302 RLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+F+ + S + PN+ +LSA + L +R G +H V+KI I D + AL+D+
Sbjct: 278 DVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDM 337
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----ND 416
YSKCG +F I ++V+WNSMI G LNGQ + A ELF+ + +
Sbjct: 338 YSKCGCWHWAYGIF--IELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDS 395
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
+W+ +ISG+ + Q F F++M +G I + + +S+L A +++++L+ GK++HG
Sbjct: 396 ATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGH 455
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM---PDKNEISWTVMVRGLAESGYA 533
I+ D F+ TAL D Y K G +RRVF + PD W M+ G +G
Sbjct: 456 TIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAF-WNAMISGYGRNGKY 514
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+ + +F +M++ + PN T++S+L CSH+G +D+G + F M Y + P H+ C
Sbjct: 515 QSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGC 574
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+VD+L RSGRL EA++ I+ MP E + +ASLL C+ + + + E K L +L +
Sbjct: 575 MVDLLGRSGRLKEAQELIHEMP-EASVSVFASLLGACRHHSDSALGEEMAKKLSELEPQD 633
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEV 696
P +V+LSNIYA GRW D VR++M ++GL+K GCS + V
Sbjct: 634 PTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPPGCSSIGV 676
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 214/451 (47%), Gaps = 72/451 (15%)
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
HG + W + F+ IS I V NGF EAL L+ KL S V ++ TF +
Sbjct: 42 HGLMXGLQWRKKTAVFE--ISMKRDIAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFL 99
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
KA A++N G + + K GF + +L + +K+ + A VF+ M
Sbjct: 100 LKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEM----- 154
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
P RN S +V I+ ++++GY EA F+Q+
Sbjct: 155 --------------------------PHRNLPSLNVTISGFSRNGYFREALGAFKQVGLG 188
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+F+PN+ + VL A AS++ VH +K+G+E D++++ A++ +YS CGE
Sbjct: 189 NFRPNSVTIASVLPACASVEL---DGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLA 245
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+ VFD I++K+ VVS+N A ISG L++
Sbjct: 246 KKVFDQILDKN---VVSYN-------------------------------AFISGLLQNG 271
Query: 431 QFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
LVF VF ++L SGE+PN T S+L A + + + G+ +HG ++K+ +D +G
Sbjct: 272 APHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVG 331
Query: 490 TALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
TAL D Y+K G + +F + +N ++W M+ G+ +G + ++ LFE++E +
Sbjct: 332 TALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGL 391
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSME 579
P+ T +++ S G V + K+F+ M+
Sbjct: 392 EPDSATWNTMISGFSQQGQVVEAFKFFHKMQ 422
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 12/249 (4%)
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
++++++ S + +K TF +L ASA + S +G+ LH ++IK GF D++ TAL D
Sbjct: 78 LSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALADM 137
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K + + +VF+ MP +N S V + G + +GY +E++ F+++ + PN +TI
Sbjct: 138 YMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTI 197
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
SVL AC+ L + + + ++ + T VV M S G L A+ + +
Sbjct: 198 ASVLPACASVELDGQ----VHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQI- 252
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA-------G 668
+ + ++ + +SG + K+L + + E P L+S + A + G
Sbjct: 253 LDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFG 312
Query: 669 RWIDAMNVR 677
R I + V+
Sbjct: 313 RQIHGLVVK 321
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 114/306 (37%), Gaps = 66/306 (21%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVK 80
+++ LL+ ++ + + G+ +HGH I+T I + +++T L+ MY+ S A +
Sbjct: 430 LKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF- 488
Query: 81 DLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
C F P+ + W A+ISG+ ++G+ +
Sbjct: 489 -----------CQ----------------FQIKPD-DPAFWNAMISGYGRNGKYQ----- 515
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
A ++F ++ E V+PN T SI C+ +
Sbjct: 516 --------------------------SAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEI 549
Query: 201 RLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G +F ++ + G ++ L + G + A+ + M + V + +L
Sbjct: 550 DRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLGA 609
Query: 260 FIEMGD--LGE--ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
D LGE A+++ E+ ++ + ++ Y G + R+ M K
Sbjct: 610 CRHHSDSALGEEMAKKL-SELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKP 668
Query: 316 TSCFSI 321
C SI
Sbjct: 669 PGCSSI 674
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/572 (31%), Positives = 301/572 (52%), Gaps = 39/572 (6%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV---KPNEVTFSSICKACAEINDF 200
NP N+ SW I GF ++ E+ L+ ++L G +P+ T+ + K CA++
Sbjct: 115 NP--NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG + G + K E V N+ I + F
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHM-------------------------------F 201
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
GD+ AR++FDE P R+ VSW+ +I Y + G E+A +++ M KP+
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMI 261
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++S+ + L L G + +V + G+ + + NAL+D++SKCG+ + R +FD++ ++
Sbjct: 262 GLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ VSW +MI GY G ++ +++LFD+M +++ V W+A+I G ++ K+ A+F
Sbjct: 322 TI---VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM S P++ T L A + + +L+ G +H I K +V LGT+L D YAK G
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+I + VF + +N +++T ++ GLA G A +I+ F EM I P+E+T + +L
Sbjct: 439 NISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
AC H G++ G YF+ M+ +N+ P +HY+ +VD+L R+G L EA+ + SMP E D+
Sbjct: 499 ACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADA 558
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL GC+ + N ++ E+A K L +L YVLL +Y A W DA R++M
Sbjct: 559 AVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMM 618
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
E+G+ K GCS +EV V F + P+
Sbjct: 619 NERGVEKIPGCSSIEVNGIVCEFIVRDKSRPE 650
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 212/447 (47%), Gaps = 71/447 (15%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
VHN I+ G++E A+++FD P R+ VSW LI+G+ K G E++++ +
Sbjct: 193 VHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY------- 245
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEINDFRLGLSVF 207
KL+ES GVKP++VT + +C+ + D G +
Sbjct: 246 -------------------------KLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+ + G + + N+L+ + K G++ AR +FD +EKR +VSWT ++ + G L
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+R++FD+M E++ V W+ MI Q+ ++A LF++M + KP+ LSA +
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L AL G+ +H ++ K + +V + +L+D+Y+KCG + VF I ++ ++
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN---SLT 457
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+ ++IGG L+G A + FNEM+ +G
Sbjct: 458 YTAIIGGLALHGDASTA-------------------------------ISYFNEMIDAGI 486
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESS 505
P++ TF +L A ++ G+D + +K F + L + + D ++G +E +
Sbjct: 487 APDEITFIGLLSACCHGGMIQTGRDYFSQ-MKSRFNLNPQLKHYSIMVDLLGRAGLLEEA 545
Query: 506 RRVFDRMP-DKNEISWTVMVRGLAESG 531
R+ + MP + + W ++ G G
Sbjct: 546 DRLMESMPMEADAAVWGALLFGCRMHG 572
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 80/398 (20%)
Query: 255 VILDVF-----IEMGDLGEAR------RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ILD F I L E+R +I + N SW+V I +++S P+E+F L
Sbjct: 81 LILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLL 140
Query: 304 FRQMTRYSF---KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
++QM R+ +P+ + ++ A L+ G + HVLK+ +E + NA I +
Sbjct: 141 YKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHM 200
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
++ CG+ ++ R VFD E V +VSWN +I GY G+ E+A
Sbjct: 201 FASCGDMENARKVFD---ESPVRDLVSWNCLINGYKKIGEAEKA---------------- 241
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
V+ M G P+ T ++ + + + L +GK+ + + +
Sbjct: 242 ---------------IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY-------- 532
G + L AL D ++K GDI +RR+FD + + +SWT M+ G A G
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLF 346
Query: 533 -----------------------AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
++++ LF+EM+ ++ P+E+T++ L ACS G +D
Sbjct: 347 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALD 406
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
G+ +E Y++ N T +VDM ++ G +SEA
Sbjct: 407 VGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEA 443
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 169/350 (48%), Gaps = 15/350 (4%)
Query: 74 EANEIVKDLNGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
E E VK+ NG + + N +++ + G++ EA+R+FD + +R VSWT +ISG+ +
Sbjct: 278 EFYEYVKE-NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G ++ S F+ ++V+ W A I G VQ +AL LF ++ S KP+E+T
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
AC+++ +G+ + I K +V++ SL+ + K G + A SVF ++ R+ +
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL 456
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM 307
++T I+ GD A F+EM + +E+++ +++ G + F QM
Sbjct: 457 TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM 516
Query: 308 -TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKC 364
+R++ P +SI++ L R+G+ A L + +E D + AL+
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLG-----RAGLLEEADRLMESMPMEADAAVWGALLFGCRMH 571
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
G + G ++E D + + + G YG E+AK M +R
Sbjct: 572 GNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNER 621
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTD--TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K + ++I G D F + L ++S ++ S ++ + + N SW V +RG +
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 529 ESGYAKESINLFEEMEKTSIT---PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
ES KES L+++M + P+ T + C+ L G + + ++
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL-RLE 188
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
+ + M + G + A + P D +W L++G YK AE+A+
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVR-DLVSWNCLING---YKKIGEAEKAIY- 243
Query: 646 LWKLAE 651
++KL E
Sbjct: 244 VYKLME 249
>gi|224103443|ref|XP_002313059.1| predicted protein [Populus trichocarpa]
gi|222849467|gb|EEE87014.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 198/626 (31%), Positives = 330/626 (52%), Gaps = 21/626 (3%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L +C+IN EAQ+LFD MP RN SW +IS +K + ++ F+
Sbjct: 32 LYSKHCLIN---------EAQKLFDEMPRRNIYSWNTIISAHVKSQNLAQAKSIFDSASV 82
Query: 147 QNVISWTAAICGFVQ-NGFSFEALKLFLKL--LESGVKPNEVTFSSICKACAEINDFRLG 203
++++++ + + G+ +G+ AL+LF+++ + + ++ T +S+ K A++++ G
Sbjct: 83 RDLVTYNSMLSGYADVDGYERNALELFVEMHSKSNDIGVDDFTVTSMVKLFAKLSNLCYG 142
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR---DVVSWTVILDVF 260
+ + + K G ++ V +SLI + K G A +F EK D+VS ++
Sbjct: 143 MQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCYKEACGIFRGSEKEGGIDLVSKNAMVAAC 202
Query: 261 IEMGDLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
G++ A +F E N+ VSW+ +I+ Y Q+GYP EA +LF M K N F
Sbjct: 203 CREGEMEMALGLFWRENELNDSVSWNTLISGYVQNGYPLEALKLFVCMGENGVKWNEHTF 262
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
VLSA A L+ L+ G +HA +LK G+ F+ + ++D+Y K G K +
Sbjct: 263 GSVLSACADLRNLKIGKEMHAWILKNGLSSSAFVESGIVDVYCKGGNMKYAESFH---LT 319
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
S SMI GY G M EA LFD++ ++N + W+A+ GY++ Q + +F +
Sbjct: 320 SGTGSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFGGYVKLNQCEAIFELL 379
Query: 440 NEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ IP+ S L A A+L GK +HG + ++G D+ + TA+ D Y+K
Sbjct: 380 CLYIAKEAAIPDALILVSALSVCAFQAALGPGKQIHGYVYRMGIEMDIKMTTAMIDMYSK 439
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G I + ++F ++ +++ + + VMV G A GY ++INLF+EM + + P+ +T +++
Sbjct: 440 CGSIPYAEKMFLKVIERDLVLYNVMVAGYAHHGYEIKAINLFQEMLERGVGPDAITFVAL 499
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE- 617
L AC H GLVD G + F SM Y I P HY C++D+ R+ +L + F+ +P E
Sbjct: 500 LSACRHRGLVDLGERTFYSMTEDYLILPETDHYACMIDLYGRASQLEKMVLFMQRIPIEY 559
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
D+ + + C+ KN ++A A + L K+ + A YV L+N YA+ G W + +R
Sbjct: 560 QDAAVAGAFFNACRLNKNTELAREAEEKLLKIEGDSGARYVQLANAYAAEGNWAEMGRIR 619
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFF 703
K M K +K GCSWV + N VH F
Sbjct: 620 KEMRGKEAKKFAGCSWVYLDNGVHTF 645
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 213/448 (47%), Gaps = 37/448 (8%)
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ R+GL K+GF + N LI L K ++ A+ +FD M +R++ SW I
Sbjct: 1 MRSLRVGLIHHVRSIKSGFTLPILTSNQLIHLYSKHCLINEAQKLFDEMPRRNIYSWNTI 60
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY-NQSGYPEEAFRLFRQMTRYSFKPN 315
+ ++ +L +A+ IFD R+ V+++ M++ Y + GY A LF +M S
Sbjct: 61 ISAHVKSQNLAQAKSIFDSASVRDLVTYNSMLSGYADVDGYERNALELFVEMHSKSNDIG 120
Query: 316 TSCFSI--VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
F++ ++ A L L GM +H++++K G ++ F+ ++LID+YSKCG K+ +
Sbjct: 121 VDDFTVTSMVKLFAKLSNLCYGMQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCYKEACGI 180
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQF 432
F ++ +VS N+M+ G+ME A LF + ND VSW+ +ISGY+++
Sbjct: 181 FRGSEKEGGIDLVSKNAMVAACCREGEMEMALGLFWRENELNDSVSWNTLISGYVQNGYP 240
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+F M +G N+ TF SVL A A + +L+ GK++H I+K G F+ + +
Sbjct: 241 LEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLSSSAFVESGI 300
Query: 493 TDTYAKSGDIESSR-------------------------------RVFDRMPDKNEISWT 521
D Y K G+++ + R+FD + +KN I W
Sbjct: 301 VDVYCKGGNMKYAESFHLTSGTGSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWA 360
Query: 522 VMVRGLAESGYAKESINLF-EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
+ G + + L + K + P+ L ++S L C+ + G K +
Sbjct: 361 ALFGGYVKLNQCEAIFELLCLYIAKEAAIPDALILVSALSVCAFQAALGPG-KQIHGYVY 419
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
I+ + + T ++DM S+ G + AE
Sbjct: 420 RMGIEMDIKMTTAMIDMYSKCGSIPYAE 447
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 191/412 (46%), Gaps = 43/412 (10%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL---NGFDLVVHNCMINA 96
G LH +++KTG + ++ + L+ MY EA I + G DLV N M+ A
Sbjct: 142 GMQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCYKEACGIFRGSEKEGGIDLVSKNAMVAA 201
Query: 97 NIQWGNLEEAQRLFDGMPERNE-VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
+ G +E A LF E N+ VSW LIS
Sbjct: 202 CCREGEMEMALGLFWRENELNDSVSWNTLIS----------------------------- 232
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
G+VQNG+ EALKLF+ + E+GVK NE TF S+ ACA++ + ++G + I K G
Sbjct: 233 --GYVQNGYPLEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGL 290
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
V + ++ + K G + A S S T ++ + G++ EA R+FD
Sbjct: 291 SSSAFVESGIVDVYCKGGNMKYAESFHLTSGTGSSFSITSMIVGYSSQGNMVEACRLFDS 350
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+ E+N + W+ + Y + E F L + + + P+ LS A AL
Sbjct: 351 LEEKNSIVWAALFGGYVKLNQCEAIFELLCLYIAKEAAIPDALILVSALSVCAFQAALGP 410
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +H +V ++GIE D+ ++ A+ID+YSKCG +F ++E+D +V +N M+ G
Sbjct: 411 GKQIHGYVYRMGIEMDIKMTTAMIDMYSKCGSIPYAEKMFLKVIERD---LVLYNVMVAG 467
Query: 395 YGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
Y +G +A LF M +R + +++ A++S DL F M
Sbjct: 468 YAHHGYEIKAINLFQEMLERGVGPDAITFVALLSACRHRGLVDLGERTFYSM 519
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 165/431 (38%), Positives = 254/431 (58%), Gaps = 4/431 (0%)
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA-SLKALRSGMHVHA 340
V+W+ +I+ +N+ G E+ F M R P + VLSA + + GM VH
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
V+ G+ D+ + NAL+D+Y++C + VFD + V VVSW S++ G GQ
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGM---QVRSVVSWTSLLSGLARLGQ 204
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
++EA++LFD MP+R+ VSW+A+I GY+ +F +F EM S ++ T SV+ A
Sbjct: 205 VDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITA 264
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
A + +LE G+ + + + G D F+G AL D Y+K G IE + VF M +++ +W
Sbjct: 265 CAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTW 324
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T ++ GLA +GY +E+I +F M + S TP+E+T + VL AC+H+GLVDKG ++F SM
Sbjct: 325 TAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIE 384
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
YNI PN HY C++D+L R+G+++EA D I+ MP P+S W +LL+ C+ + N +I E
Sbjct: 385 AYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGE 444
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
+ L +L E+ Y+LLSNIYA RW D +R + EKG++K GCS +E+ +
Sbjct: 445 LVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGII 504
Query: 701 HFFFQKTDHNP 711
H F +P
Sbjct: 505 HEFVAGDQSHP 515
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 177/378 (46%), Gaps = 37/378 (9%)
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE-INDFRLGLSVFG 208
++W A I G + G E+ F+ + +G P VT+ S+ AC + D LG+ V G
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ +G + V N+L+ + + ++ A VFD M+ R VVSWT +L +G + E
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +FD MPER+ VSW+ MI Y + EA +FR+M + + V++A A
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L AL G V ++ + GI+ D F+ NALID+YSKCG + VF + +D +W
Sbjct: 268 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRD---KFTW 324
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++I G +NG EEA E+ F+ M+ E
Sbjct: 325 TAIILGLAVNGYEEEAIEM-------------------------------FHRMIRVSET 353
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRR 507
P++ TF VL A ++KG++ +I+ +V + D ++G I +
Sbjct: 354 PDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALD 413
Query: 508 VFDRMP-DKNEISWTVMV 524
D+MP N W ++
Sbjct: 414 TIDQMPMTPNSTIWGTLL 431
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 69/347 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL V N +++ + ++ A ++FDGM R+ VSWT+L+SG + G+V+E+ F+R P
Sbjct: 157 DLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMP 216
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++ +SWTA I G+V EAL++F ++ S V +E T S+ ACA++ +G
Sbjct: 217 ERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEW 276
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V + + G + V N+LI + K G ++ A VF M RD +WT I+
Sbjct: 277 VRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAII-------- 328
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
LG A +GY EEA +F +M R S P+ F VL+A
Sbjct: 329 LGLA-----------------------VNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTA 365
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK-DVA- 383
HA G GR F S++E ++A
Sbjct: 366 C-----------THA------------------------GLVDKGREFFLSMIEAYNIAP 390
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEH 429
+VV + +I G G++ EA + D MP N W +++ H
Sbjct: 391 NVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVH 437
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 176/363 (48%), Gaps = 44/363 (12%)
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK----ALRSGMHVHAHVLKIGIEKDVFI 353
E+A + +M +P+ F +L A+A + VHAHV+++G+ ++ +
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+++L+ Y+ G+ R + + E D V+WN++I G+ G+ E+ F +M +
Sbjct: 61 ASSLVAAYTAGGDGAAARAL---VGECDTP--VAWNALISGHNRGGRFGESCGSFVDMAR 115
Query: 414 R----NDVSWSAIISGYLE-HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
V++ +++S + + L V ++ SG +P+ ++++
Sbjct: 116 AGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALV---------- 165
Query: 469 KGKDLHGKIIKLGFPYDVFLG---------TALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
D++ + +G + VF G T+L A+ G ++ +R +FDRMP+++ +S
Sbjct: 166 ---DMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVS 222
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG--LKYFNS 577
WT M+ G + +E++ +F EM+ ++++ +E T++SV+ AC+ G ++ G ++ + S
Sbjct: 223 WTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMS 282
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT--YKN 635
+ IK + ++DM S+ G + A D M D W +++ G Y+
Sbjct: 283 RQ---GIKMDAFVGNALIDMYSKCGSIERALDVFKGM-HHRDKFTWTAIILGLAVNGYEE 338
Query: 636 EQI 638
E I
Sbjct: 339 EAI 341
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 202/677 (29%), Positives = 333/677 (49%), Gaps = 105/677 (15%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL T + +GR LHGH+I G + L +L+ Y + F+
Sbjct: 180 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY----------------SAFN 223
Query: 87 LVV--HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
L+V H N+NI +
Sbjct: 224 LLVDAHVITENSNI--------------------------------------------LH 239
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
PF W I +V+NGF +AL + ++++ G++P+ T+ S+ KAC E D G
Sbjct: 240 PF----PWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGK 295
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V I + + + V N+LI++ K G+V +AR +FD++ +RD VSW ++ V+ MG
Sbjct: 296 EVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMG 355
Query: 265 DLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
EA +F M E N + W+ + Y ++G + A L QM + ++
Sbjct: 356 MWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALI 415
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
I L A + + + G +H+ ++ + + N+LI +YS+C + K L+F
Sbjct: 416 IGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLF------ 469
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
Q+ EAK L +SW++IISG + + +
Sbjct: 470 -------------------QLMEAKSL---------ISWNSIISGCCHMDRSEEASFLLR 501
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKS 499
EMLLSG PN T +SVL A VA+L+ GK+ H + + F + L AL D YA+S
Sbjct: 502 EMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARS 561
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G + +RRVFD + +++++++T M+ G G + ++ LFEEM I P+ +T+++VL
Sbjct: 562 GKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVL 621
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSHSGLV +G F M +Y + P+ H+ C+ D+ R+G L++A++ I +MP++P
Sbjct: 622 SACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPT 681
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
WA+L+ C+ ++N +I E A + L ++ E+P YVL++N+YA+AG W VR
Sbjct: 682 PAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXF 741
Query: 680 MTEKGLRKSGGCSWVEV 696
M + G+RK+ GC+WV+V
Sbjct: 742 MRDLGVRKAPGCAWVDV 758
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 193/604 (31%), Positives = 316/604 (52%), Gaps = 73/604 (12%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+E T+LI + K G V+ ++ +++ + + I + +NGF +A ++F+++
Sbjct: 147 DEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIG 206
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
G +PN T+S++ C I+ + G + + K + +V N+L+TL K G ++
Sbjct: 207 NMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMME 266
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYN 292
A VF+ + +R+++SWT ++ F + GD +A + F M E NE ++S+++A
Sbjct: 267 EAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCG 326
Query: 293 Q---------------SGYPEEAFRLFRQMTR-----YSFKPNTSCFSIVLSALASLKAL 332
G + L R+M S +PN +L A L
Sbjct: 327 CDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDR 386
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
R+G ++H +LK E D +I +ALI +YSKCG
Sbjct: 387 RTGENMHTVILKNSFESDAYIISALIYMYSKCG--------------------------- 419
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
+E+A +FD +P N VSW+ +I+G F++ML G P+
Sbjct: 420 -------HVEKACRVFDWIP--NVVSWNTLIAG-------------FSQMLDQGFCPSSV 457
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T SS+L A +VA+L GK++HG + +G DV++ +AL D YAK G I ++ +F M
Sbjct: 458 TISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMM 517
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
P++N ++W ++ G A GY E+I LF +ME++ + LT +VL ACSH+G+V+ G
Sbjct: 518 PERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGE 577
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
F M+ Y I+P HY C+VD+L R+G+LSEA D I +MP EPD W +LL C+
Sbjct: 578 SLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRN 637
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
+ N ++AE A ++L++L E P +LLSN+YA AGRW +A ++K+M ++ K GCS
Sbjct: 638 HGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCS 697
Query: 693 WVEV 696
W+E
Sbjct: 698 WIEA 701
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 142/582 (24%), Positives = 254/582 (43%), Gaps = 110/582 (18%)
Query: 92 CMINANI--QWGNLEEAQRLFDGMPERNEVSWT-ALISGFMKHGR--VEESMWYFERNPF 146
CM N+ W +L A LF+ P+R VS T + SG V+E+ +F RN
Sbjct: 43 CMSKGNVVGGWVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEA-GFFTRNET 101
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+V GF + F AL C LG
Sbjct: 102 PHVEFGG----GFPHRQYVFSALSF----------------------CGREGCVELGRRW 135
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K G VC SLI + K GEVD A V+D+M D
Sbjct: 136 HCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA---------------- 179
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ + +I+ Y ++G+ +AF++F Q+ +PN +S +L+
Sbjct: 180 ---------------ATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVC 224
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++ A++ G +HAHV+K+ + + NAL+ LYSKCG ++ +VF+++ +++ ++
Sbjct: 225 GTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRN---II 281
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG-------YLEHK----- 430
SW + I G+ +G ++A + F M + N+ ++S +++ +++ +
Sbjct: 282 SWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNR 341
Query: 431 ---QFDLVFAVFNEMLLSGEI-----PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
Q + + +M+ G PN+ S+L A ++ G+++H I+K F
Sbjct: 342 WGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSF 401
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D ++ +AL Y+K G +E + RVFD +P N +SW ++ G F +
Sbjct: 402 ESDAYIISALIYMYSKCGHVEKACRVFDWIP--NVVSWNTLIAG-------------FSQ 446
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M P+ +TI S+L AC++ + G K + + ++ + + +VDM ++ G
Sbjct: 447 MLDQGFCPSSVTISSLLPACTNVANLRHG-KEIHGYAMVIGVEKDVYVRSALVDMYAKCG 505
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+SEA+ MP E ++ W SL+ G Y N A++
Sbjct: 506 YISEAKILFYMMP-ERNTVTWNSLIFG---YANHGYCNEAIE 543
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 233/530 (43%), Gaps = 91/530 (17%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL-----IMYLGSRKSLEANE 77
TC CL+ +Q + + G Y + +L I + K L A+
Sbjct: 181 TCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH- 239
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+VK + V N ++ + G +EEA+ +F+ + +RN +SWTA I+GF +HG +++
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKA 299
Query: 138 MWYF--------ERNPFQNVISWTAAICGFVQ-----------NGFSFEALKLFLKLLES 178
+ F E N F I + C + G ++ L K++E
Sbjct: 300 LKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEE 359
Query: 179 G-----VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
G ++PN+ SI KAC ++D R G ++ +I K FE + ++LI + K G
Sbjct: 360 GNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCG 419
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
V+ A VFD + +VVSW ++ F +M D G
Sbjct: 420 HVEKACRVFDWIP--NVVSWNTLIAGFSQMLDQG-------------------------- 451
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
F P++ S +L A ++ LR G +H + + IG+EKDV++
Sbjct: 452 ------------------FCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYV 493
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM-- 411
+AL+D+Y+KCG + +++F + E++ V+WNS+I GY +G EA ELF+ M
Sbjct: 494 RSALVDMYAKCGYISEAKILFYMMPERN---TVTWNSLIFGYANHGYCNEAIELFNQMEE 550
Query: 412 --PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLE 468
K + ++++A+++ +L ++F +M I P ++ ++ L
Sbjct: 551 SDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLS 610
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE----SSRRVFDRMPD 514
+ DL I + D F+ AL G+IE ++ +F+ P+
Sbjct: 611 EAYDL---IKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPE 657
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
C AN++ G + G+ E++ +AL+ + K G + E+ F P +N ++
Sbjct: 466 CTNVANLRHGKEIHGYAMVIGV-EKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 524
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W + I G+ +G+ EA++LF ++ ES K + +TF+++ AC+ LG S +F
Sbjct: 525 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGES----LF 580
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ EK+ R+E R + + ++D+ G L EA
Sbjct: 581 RKMQEKY-------------------------RIEPR-LEHYACMVDLLGRAGKLSEAYD 614
Query: 272 IFDEMP-ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ MP E ++ W ++ G E A + + +P + S++LS L
Sbjct: 615 LIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHL--FELEPESPGSSLLLSNL 668
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 283/540 (52%), Gaps = 68/540 (12%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
L L+ ++ + PN TF + ACA + + R+ +FK G + NS++T
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ + GE G AR++FDE+ E++ VSW+ +
Sbjct: 161 MYFRCGEN-------------------------------GVARKVFDEITEKDLVSWNSL 189
Query: 288 IARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
++ Y + G+ EA +F ++ S F+P+ VL A L L G V V++ G
Sbjct: 190 LSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERG 249
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
++ + +I +ALI +YSKCGE + ++
Sbjct: 250 MKVNSYIGSALISMYSKCGE----------------------------------LVSSRR 275
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
+FD MP R+ ++W+A IS Y ++ D ++F+ M +G PNK T ++VL A AS+ +
Sbjct: 276 IFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGA 335
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L+ GK + G +D+F+ TAL D YAK G +ES++RVF+ MP KN+ SW M+
Sbjct: 336 LDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISA 395
Query: 527 LAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA G AKE+++LFE M E S PN++T +S+L AC H+GLVD+G + F+ M ++ +
Sbjct: 396 LASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGL 455
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P HY+C+VD+LSR+G L EA D I MP +PD+ +L S C+ KN I ER ++
Sbjct: 456 VPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQ 515
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L +L + Y++ S IY + W DA +R LM E G+ K+ GCSW+EV NQ+ F
Sbjct: 516 MLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFL 575
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 199/398 (50%), Gaps = 45/398 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVK 181
++++ + + G + F+ ++++SW + + G+ + GF+ EA+++F +L E SG +
Sbjct: 157 SMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFE 216
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+E++ S+ AC E+ D LG V G + + G + + + ++LI++ K GE
Sbjct: 217 PDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGE------- 269
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
L +RRIFD MP R+ ++W+ I+ Y Q+G +EA
Sbjct: 270 ------------------------LVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF M PN + VLSA AS+ AL G + + G++ D+F++ ALID+Y
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMY 365
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM------PKRN 415
+KCG + + VF+ + K+ A SWN+MI +G+ +EA LF+ M + N
Sbjct: 366 AKCGSLESAQRVFNDMPRKNDA---SWNAMISALASHGKAKEALSLFERMSDEGGSARPN 422
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEM-LLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
D+++ +++S + D + +F+ M L G +P +S ++ + L + D+
Sbjct: 423 DITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVI 482
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
K+ + P +V LG AL + +++ RV +
Sbjct: 483 EKMPEK--PDNVTLG-ALHSACQRKKNVDIGERVIQML 517
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 184/424 (43%), Gaps = 63/424 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
R H + K G+ + + ++ MY ++ A ++ ++ DLV N +++ +
Sbjct: 136 ARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAK 195
Query: 100 WGNLEEAQRLFDGMPER-----NEVS------------------W--------------- 121
G EA +F + E +E+S W
Sbjct: 196 LGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSY 255
Query: 122 --TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+ALIS + K G + S F+ P ++ I+W AAI + QNG + EA+ LF + E+G
Sbjct: 256 IGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENG 315
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V PN+VT +++ ACA I LG + G + + V +LI + K G ++ A+
Sbjct: 316 VDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQ 375
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER------NEVSWSVMIARYNQ 293
VF+ M +++ SW ++ G EA +F+ M + N++++ +++
Sbjct: 376 RVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVH 435
Query: 294 SGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+G +E +RLF M T + P +S ++ L+ L V + K+ + D
Sbjct: 436 AGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDV---IEKMPEKPDNV 492
Query: 353 ISNALIDLYSKCGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
A L+S C K+ G V ++E D + NS G Y ++ ++ E ++D
Sbjct: 493 TLGA---LHSACQRKKNVDIGERVIQMLLELDPS-----NS--GNYIISSKIYENLNMWD 542
Query: 410 NMPK 413
+ +
Sbjct: 543 DAAR 546
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 130/275 (47%), Gaps = 11/275 (4%)
Query: 412 PKRNDVSWSAIISGYLEH-KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
P ND +++ ++ + L ++++M PN TF V A A++ +
Sbjct: 77 PHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMA 136
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ H ++ KLG D ++ Y + G+ +R+VFD + +K+ +SW ++ G A+
Sbjct: 137 RLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKL 196
Query: 531 GYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
G+A+E++ +F + E++ P+E++++SVL AC G ++ G ++ +K N
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELG-RWVEGFVVERGMKVNSY 255
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
+ ++ M S+ G L + + MP D W + +S Y +A+ A+ +
Sbjct: 256 IGSALISMYSKCGELVSSRRIFDGMP-SRDFITWNAAISA---YAQNGMADEAISLFHSM 311
Query: 650 AEE--HPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
E P L + + A A I A+++ K M E
Sbjct: 312 KENGVDPNKVTLTAVLSACAS--IGALDLGKQMDE 344
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 14/217 (6%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
SLF E + T +L S + G+ + + G+ + ++ T L+ MY
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMY 365
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER------NEVS 120
A + D+ + N MI+A G +EA LF+ M + N+++
Sbjct: 366 AKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDIT 425
Query: 121 WTALISGFMKHGRVEESMWYFER-----NPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+ +L+S + G V+E F+ + ++ + + G +EA + K+
Sbjct: 426 FVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKM 485
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
E KP+ VT ++ AC + +G V ++ +
Sbjct: 486 PE---KPDNVTLGALHSACQRKKNVDIGERVIQMLLE 519
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 263/459 (57%), Gaps = 9/459 (1%)
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
++ DLG AR IFD + R+ + W+ +I Y ++ + + LF ++ + + P+
Sbjct: 62 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV-HEYLPDNFTLPC 120
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
V+ A L ++ G +H LKIG DVF+ +L+++YSKCGE R VFD +++KD
Sbjct: 121 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 180
Query: 382 V--------AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
V ++VSWN+MI GY +G + A ELF MP + V+W+ +I+GY + QF
Sbjct: 181 VVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFM 240
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+F ML G P+ +T SVL A + +A L KG+ +H + K GF D LGT+L
Sbjct: 241 DAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLI 300
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
+ YAK G IES+ VF + K WT ++ GL G A ++ LF EM KT + PN +
Sbjct: 301 EMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAI 360
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
+ VL AC+H+GLVD G +YF+ M Y I+P HY C+VD+L R+G L EA++ I +
Sbjct: 361 IFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIEN 420
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
MP P+ W SLL G + + I E A + + ++A E Y+LLSN+YA++G W
Sbjct: 421 MPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKV 480
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+VR++M ++G RK GCS VE + +H F +P+
Sbjct: 481 SHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQ 519
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 203/441 (46%), Gaps = 57/441 (12%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+R +++I W I +V+N FS + + LF +L+ + P+ T + K CA +
Sbjct: 73 FDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVV 131
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV--------- 251
+ G + GL K GF V V SL+ + K GE+D AR VFD M +DVV
Sbjct: 132 QEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGN 191
Query: 252 --SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
SW +++ +++ GD A +F +MP + V+W++MIA Y +G +A ++F M +
Sbjct: 192 LVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLK 251
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+P+ + VLSA++ L L G +H+++ K G E D + +LI++Y+KCG +
Sbjct: 252 LGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIES 311
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
VF +I +K V H W ++I G G++G A
Sbjct: 312 ALTVFRAIQKKKVGH---WTAIIVGLGIHGMANHA------------------------- 343
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK---DLHGKIIKLGFPYDV 486
A+F EM +G PN F VL A ++ G+ D+ K+ +
Sbjct: 344 ------LALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEH 397
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+ L D ++G +E ++ + MP N++ W ++ G + K I +
Sbjct: 398 Y--GCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG--SRNHGKIDIGEYAAQRV 453
Query: 546 TSITPNEL---TILSVLFACS 563
+ P + +LS ++A S
Sbjct: 454 IEVAPETIGCYILLSNMYAAS 474
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 166/429 (38%), Gaps = 117/429 (27%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C++K +V +G+ +HG +K G
Sbjct: 117 TLPCVIKGCARLGVVQEGKQIHGLALKIGF------------------------------ 146
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER-----------NEVSWTALISGFMKH 131
G D+ V ++N + G ++ A+++FDGM ++ N VSW A+I+G+MK
Sbjct: 147 -GSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKS 205
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G + ++ F + P ++++W I G+ NG +A+K+F +L+ G +P+ T S+
Sbjct: 206 GDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVL 265
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
A + + G + + K GFE + SLI + K G ++ A +VF ++K+ V
Sbjct: 266 SAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVG 325
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
WT I I G A LF +M +
Sbjct: 326 HWTAI-------------------------------IVGLGIHGMANHALALFLEMCKTG 354
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
KPN F VL+A HA G DGR
Sbjct: 355 LKPNAIIFIGVLNACN-----------HA------------------------GLVDDGR 379
Query: 372 LVFDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISG 425
FD + +E + H + ++ G +EEAK +NMP N V W +++ G
Sbjct: 380 QYFDMMMNEYKIEPTLEH---YGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG 436
Query: 426 YLEHKQFDL 434
H + D+
Sbjct: 437 SRNHGKIDI 445
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 145/351 (41%), Gaps = 81/351 (23%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS--KCGETKDGRLVFDSIVEK 380
LS + A + +HA LK I F+S+ L+ LYS K + R +FD I +
Sbjct: 20 LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR 79
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ H W+ II Y+E++ +F+
Sbjct: 80 SLIH----------------------------------WNTIIKCYVENQFSHDGIVLFH 105
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
E L+ +P+ T V+ A + +++GK +HG +K+GF DVF+ +L + Y+K G
Sbjct: 106 E-LVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCG 164
Query: 501 DIESSRRVFDRMPDK-----------NEISWTVMVRGLAESGYAKESINLFEEME----- 544
+I+ +R+VFD M DK N +SW M+ G +SG ++ LF +M
Sbjct: 165 EIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLV 224
Query: 545 --------------------------KTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
K P+ T++SVL A S ++ KG ++ +S
Sbjct: 225 TWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKG-RWIHSY 283
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ +G T +++M ++ G + A ++ + W +++ G
Sbjct: 284 MEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ-KKKVGHWTAIIVG 333
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/592 (31%), Positives = 307/592 (51%), Gaps = 5/592 (0%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+ IS G + + F+ P ++ ++W + I + Q GF EAL +F ++ + K
Sbjct: 9 TSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTK 68
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ TF++ ACA F G + L+ G+ + V NSLI + K + A V
Sbjct: 69 PDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQV 128
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F M + VSW +L + G EA IF+ MP + E++W+ MIA + G E
Sbjct: 129 FKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIELCL 188
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+FR+M +P+ +S ++SA SG +H V++ G + N+++ LY
Sbjct: 189 DMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLY 248
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+K G D V +S VSWN++I Y G + EA +F ++P++N VSW++
Sbjct: 249 AKFGSLNDALKVVESTGRLTQ---VSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTS 305
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY + + F M + +P+ TF +VL A +S+A L G+ +HG I+ G
Sbjct: 306 MITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNG 365
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F +++G L + YAK GD++ S F + K+ +S+ ++ G A E++ L+E
Sbjct: 366 FSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEALQLYE 425
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M P+++T + +L CSHSGL+++G +FNSM+ ++ + H C+VDML R
Sbjct: 426 DMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLGRG 485
Query: 602 GRLSEAEDFIN--SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
G L+EA++ + S + ++++ +LL C + ++ K L L YVL
Sbjct: 486 GYLAEAKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNKEISYVL 545
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
SN+Y G+W +A VRK M ++GL+K GCSW+EVRN+V F P
Sbjct: 546 QSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHLYP 597
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 246/556 (44%), Gaps = 101/556 (18%)
Query: 63 LIMYLGSRKSLEANEIVKDLNG--FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
L++ LG SL N + D+ G FD A ++F M + NEVS
Sbjct: 96 LVIILGYHSSLPVNNSLIDMYGKCFDAF----------------SAGQVFKEMGDINEVS 139
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W +L+ + GR E+ F P + I+W I G + G L +F ++ ES +
Sbjct: 140 WCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIELCLDMFREMRESLL 199
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+P++ T+S++ AC E +F G + GL+ ++G+ + NS+++L K G ++ A
Sbjct: 200 EPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALK 259
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
V + + VSW I+D ++++G + EA +F +PE+N VSW+ MI Y ++GY EEA
Sbjct: 260 VVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEA 319
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
R F M F P+ F VL A +SL L G VH ++ G +++ N L+++
Sbjct: 320 LRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNM 379
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG+ L F I KD +VS+N+++ +GL+G+ EA +L++
Sbjct: 380 YAKCGDLDGSILAFHDICAKD---LVSFNALLFAFGLHGKASEALQLYE----------- 425
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+M+ G P+K TF +L
Sbjct: 426 --------------------DMMTCGTKPDKMTFIGLLM--------------------- 444
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW-----TVMVRGLAESGYAKE 535
T + SG IE R F+ M + +S+ MV L GY E
Sbjct: 445 --------------TCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLGRGGYLAE 490
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL---KYFNSMEPIYNIKPNGRHYT 592
+ L ++ KTS + ++L ACS G V+ G K ++EP I Y
Sbjct: 491 AKELVKKYSKTSDVEAS-SCEALLGACSAHGEVEMGTYLGKTLKTLEPNKEIS-----YV 544
Query: 593 CVVDMLSRSGRLSEAE 608
++ G+ EAE
Sbjct: 545 LQSNLYCVRGQWKEAE 560
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 129/285 (45%), Gaps = 35/285 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L+ T + G LHG +I++G +L +Y +A ++V+
Sbjct: 209 LISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLT 268
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V N +I+A ++ G + EA +F +PE+N VSWT++I+G+
Sbjct: 269 QVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGY------------------ 310
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NG+ EAL+ F+ + + P++ TF ++ AC+ + G V
Sbjct: 311 -------------ARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMV 357
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + GF ++ V N L+ + K G++D + F + +D+VS+ +L F G
Sbjct: 358 HGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKA 417
Query: 267 GEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
EA +++++M + +++++ ++ + SG EE F M
Sbjct: 418 SEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSM 462
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 35/181 (19%)
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
++F T+ SG I +R++FD MP+++ ++W M+ ++ G+ +E++++F +M
Sbjct: 4 NLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMR 63
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKY--------FNSMEPIYN--IKPNGR----- 589
T+ P+ T + L AC+ +G G K ++S P+ N I G+
Sbjct: 64 NTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAF 123
Query: 590 ---------------HYTCVVDMLSRSGRLSEAEDFINSMP--FEPDSNAWASLLSGCKT 632
+ ++ + SGR SEA + N MP FE AW ++++G
Sbjct: 124 SAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEI---AWNTMIAGLGR 180
Query: 633 Y 633
Y
Sbjct: 181 Y 181
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 284/522 (54%), Gaps = 35/522 (6%)
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N F+ ++C G + L+ +GF +CN L+++ K+G+ A +V+
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
RM K++ +S ++++ ++ GDL AR++FDEMP+R +W+ MIA Q + EE
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 162
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR+M F P+ V S A L+++ G +H + +K G+E D+ ++++L +Y
Sbjct: 163 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 222
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
+ G+ +DG +V S MP RN V+W+ +
Sbjct: 223 RNGKLQDGEIVIRS----------------------------------MPVRNLVAWNTL 248
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I G ++ + V ++ M +SG PNK TF +VL + + +A +G+ +H + IK+G
Sbjct: 249 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 308
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
V + ++L Y+K G + + + F D++E+ W+ M+ G E+I LF
Sbjct: 309 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 368
Query: 543 M-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M E+T++ NE+ L++L+ACSHSGL DKGL+ F+ M Y KP +HYTCVVD+L R+
Sbjct: 369 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 428
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L +AE I SMP + D W +LLS C +KN ++A+R K + ++ A YVLL+
Sbjct: 429 GCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLA 488
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
N++ASA RW D VRK M +K ++K G SW E + +VH F
Sbjct: 489 NVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQF 530
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 137/572 (23%), Positives = 241/572 (42%), Gaps = 113/572 (19%)
Query: 2 KASLRSLF-----SINPETS-FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKE 55
K +LR F +I TS F +I++C T++ + G+ LH L+ +G +
Sbjct: 26 KGNLREAFQRFRLNIFTNTSLFTPFIQSC-------TTRQSLPSGKQLHCLLVVSGFSSD 78
Query: 56 RYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE 115
+++ L+ MY + G+ A ++ M +
Sbjct: 79 KFICNHLMSMY-------------------------------SKLGDFPSAVAVYGRMRK 107
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+N +S LI+G+++ G + + F+ P + + +W A I G +Q F+ E L LF ++
Sbjct: 108 KNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM 167
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
G P+E T S+ A + +G + G K G E + V +SL + ++ G++
Sbjct: 168 HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 227
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
V M R++V+W ++ +G A Q+G
Sbjct: 228 QDGEIVIRSMPVRNLVAWNTLI--------MGNA-----------------------QNG 256
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
PE L++ M +PN F VLS+ + L G +HA +KIG V + +
Sbjct: 257 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 316
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+LI +YSKCG D F E++ V W+SMI YG +GQ +EA ELF+ M ++
Sbjct: 317 SLISMYSKCGCLGDAAKAFS---EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 373
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
++ EI N+ F ++L A + +KG +L
Sbjct: 374 NM-----------------------------EI-NEVAFLNLLYACSHSGLKDKGLELFD 403
Query: 476 KII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGYA 533
++ K GF + T + D ++G ++ + + MP K +I W ++ A
Sbjct: 404 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 463
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHS 565
+ + +F+E+ I PN+ + VL A H+
Sbjct: 464 EMAQRVFKEI--LQIDPND-SACYVLLANVHA 492
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 338/666 (50%), Gaps = 97/666 (14%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
+HG LIKTGI K LTTR+++ + SR+ A+ F V + + +G
Sbjct: 31 IHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLAD--------FARCVFHEYHVCSFSFGE 82
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
+E+ W A+I HG+ +P Q
Sbjct: 83 VEDP------------FLWNAVIKSH-SHGK----------DPRQ--------------- 104
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
AL L +LE+GV ++ + S + KAC+ + + G+ + G + K G + +
Sbjct: 105 -----ALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQ 159
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE--RN 280
N LI L LK G + L+R +FDRM KRD VS+ ++D +++ G + AR +FD MP +N
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 281 EVSWSVMIARYNQ-SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+SW+ MI+ Y Q S + A +LF M
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMP------------------------------- 248
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
EKD+ N++ID Y K G +D + +FD + +DV V+W +MI GY G
Sbjct: 249 --------EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV---VTWATMIDGYAKLG 297
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+ AK LFD MP R+ V+++++++GY+++K +F++M + P+ +T VL
Sbjct: 298 FVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 357
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A + L K D+H I++ F LG AL D Y+K G I+ + VF+ + +K+
Sbjct: 358 PAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID 417
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W M+ GLA G + + ++ ++E+ S+ P+++T + VL ACSHSGLV +GL F M
Sbjct: 418 HWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELM 477
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ I+P +HY C+VD+LSRSG + A++ I MP EP+ W + L+ C +K +
Sbjct: 478 RRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFET 537
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E K+L A +P+ YVLLSN+YAS G W D VR +M E+ + K GCSW+E+
Sbjct: 538 GELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDG 597
Query: 699 QVHFFF 704
+VH FF
Sbjct: 598 RVHEFF 603
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 199/484 (41%), Gaps = 94/484 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V G +HG L KTG+ + +L L+ +YL + ++ + D
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 87 LVVHNCMINANIQWGNLEEAQRLFD----------------------------------G 112
V +N MI+ ++ G + A+ LFD
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
MPE++ +SW ++I G++KHGR+E++ F+ P ++V++W I G+ + GF A LF
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL-- 230
++ V V ++S+ + L +F + K E H+ ++ + + L
Sbjct: 307 DQMPHRDV----VAYNSMMAGYVQNKYHMEALEIFSDMEK---ESHLLPDDTTLVIVLPA 359
Query: 231 --KMGE----VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
++G +D+ + ++ ++D++ + G + A +F+ + ++ W
Sbjct: 360 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 419
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ MI G E AF + Q+ R S KP+ F VL+A
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC------------------ 461
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNG 399
S G K+G L F+ + +E + H + M+ +G
Sbjct: 462 -----------------SHSGLVKEGLLCFELMRRKHKIEPRLQH---YGCMVDILSRSG 501
Query: 400 QMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSV 457
+E AK L + MP + NDV W ++ HK+F+ V ++L +G P+ S
Sbjct: 502 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 561
Query: 458 LCAS 461
+ AS
Sbjct: 562 MYAS 565
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 274/479 (57%), Gaps = 55/479 (11%)
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR +FD+M + + +SW ++ +++ G + EAR++FD+MPERN VSW+ MI Y Q G
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEA LF +M + N ++++L L IE
Sbjct: 73 EEAELLFWRMP----ERNVVSWTVMLGGL--------------------IED-------- 100
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
G + R +FD + KDV V+ +MI G G++ EA+E+FD MP+RN V
Sbjct: 101 -------GRVDEARQLFDMMPVKDV---VASTNMIDGLCSEGRLIEAREIFDEMPQRNVV 150
Query: 418 SWSAIISG------------YLEHKQFDL-VFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+W+++ISG E K F+L A+F+ M G P+ + SVL S+
Sbjct: 151 AWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSL 210
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
ASL+ G+ +H ++++ F D+++ + L Y K GD+ +++RVFDR K+ + W ++
Sbjct: 211 ASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSII 270
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G A+ G+ ++++ +F +M +SI P+E+T + VL ACS++G V +GL+ F SM+ Y +
Sbjct: 271 AGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQV 330
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P HY C+VD+L R+G+L+EA + I +MP E D+ W +LL C+T+KN +AE A K
Sbjct: 331 DPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAK 390
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L +L + Y+LLSN+Y+S RW D + +RK M K LRKS GCSW+EV +VH F
Sbjct: 391 KLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIF 449
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 209/464 (45%), Gaps = 99/464 (21%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y +++ EA ++ + + + N +++ +Q G + EA+++FD MPERN VSWTA+I
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMI 63
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G+++ G +EE+ F R P +NV+SWT + G +++G EA +LF + VK
Sbjct: 64 RGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMM---PVKDVVA 120
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+ + I C+E G + AR +FD M
Sbjct: 121 STNMIDGLCSE------------------------------------GRLIEAREIFDEM 144
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
+R+VV+WT ++ E+++ +WS MI Y + G+ EA LF
Sbjct: 145 PQRNVVAWTSMIS------------------GEKDDGTWSTMIKIYERKGFELEALALFS 186
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M R +P+ VLS SL +L G VH+ +++ + D+++S+ LI +Y KCG
Sbjct: 187 LMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCG 246
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ + VFD KD +V WNS+I GY +G E+A E
Sbjct: 247 DLVTAKRVFDRFSSKD---IVMWNSIIAGYAQHGFGEKALE------------------- 284
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
VF++M S P++ TF VL A + +++G ++ + Y
Sbjct: 285 ------------VFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEI---FESMKSKYQ 329
Query: 486 VFLGT----ALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
V T + D ++G + + + + MP + + I W ++
Sbjct: 330 VDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 101/297 (34%)
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
+ GY N + EA++LFD MP+ N +SW+ ++SGY+++ VF++M P +
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM------PER 54
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
+ S TA+ Y + G IE + +F R
Sbjct: 55 NVVS---------------------------------WTAMIRGYVQEGLIEEAELLFWR 81
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
MP++N +SWTVM+ GL E G E+ LF+
Sbjct: 82 MPERNVVSWTVMLGGLIEDGRVDEARQLFD------------------------------ 111
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
M P+ ++ + T ++D L GRL EA + + MP + + AW S++SG
Sbjct: 112 ------MMPVKDVVAS----TNMIDGLCSEGRLIEAREIFDEMP-QRNVVAWTSMISG-- 158
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
E+ + + IY G ++A+ + LM +G+R S
Sbjct: 159 -------------------EKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPS 196
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 64/253 (25%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
+LFS+ + + +L S + GR +H L+++ + Y+++ L+ MY
Sbjct: 183 ALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMY 242
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
I+ G+L A+R+FD ++ V W ++I+
Sbjct: 243 -------------------------------IKCGDLVTAKRVFDRFSSKDIVMWNSIIA 271
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G+ +H GF +AL++F + S + P+E+T
Sbjct: 272 GYAQH-------------------------------GFGEKALEVFHDMFSSSIAPDEIT 300
Query: 187 FSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
F + AC+ + GL +F + K + ++ L + G+++ A ++ + M
Sbjct: 301 FIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENM 360
Query: 246 E-KRDVVSWTVIL 257
+ D + W +L
Sbjct: 361 PVEADAIVWGALL 373
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 204/674 (30%), Positives = 343/674 (50%), Gaps = 85/674 (12%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
LCL I+S Q R L L K G LT + I+ S ++EI
Sbjct: 16 LCLTPSISSSAPTKQSRILE--LCKLG-----QLTEAIRIL-----NSTHSSEIPATPKL 63
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR-VEESMWYFER 143
+ ++ C + G A + G+ V +L+S + K G + E+ F+
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG-NSLLSLYFKLGPGMRETRRVFDG 122
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
++ ISWT+ + G+V +AL++F++++ G+ NE T SS KAC+E+ + RLG
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
G++ GFE + + ++L L + R D
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYL------YGVNREPVD-------------------- 216
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIV 322
ARR+FDEMPE + + W+ +++ ++++ EEA LF M R P+ S F V
Sbjct: 217 -----ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L+A +L+ L+ G +H ++ GI +V + ++L+D+Y KC
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC------------------ 313
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
G + EA+++F+ M K+N VSWSA++ GY ++ + + +F EM
Sbjct: 314 ----------------GSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
E + F +VL A A +A++ GK++HG+ ++ G +V + +AL D Y KSG I
Sbjct: 358 ----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCI 413
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+S+ RV+ +M +N I+W M+ LA++G +E+++ F +M K I P+ ++ +++L AC
Sbjct: 414 DSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTAC 473
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
H+G+VD+G YF M Y IKP HY+C++D+L R+G EAE+ + D++
Sbjct: 474 GHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASL 533
Query: 623 WASLLSGCKTYKN-EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W LL C + ++AER K + +L ++ YVLLSN+Y + GR DA+N+RKLM
Sbjct: 534 WGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMV 593
Query: 682 EKGLRKSGGCSWVE 695
+G+ K+ G SW++
Sbjct: 594 RRGVAKTVGQSWID 607
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 288/541 (53%), Gaps = 39/541 (7%)
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI-----FKAGFEKHVSVCNSLITLS 229
L E+ VK + V S + +R L +F + F G+ + ++ N+ I L
Sbjct: 87 LKETHVKKSSVGICSQIEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLK 146
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
G L + D + D +L + ++ G + +A R+FDEMP RN VSW +I+
Sbjct: 147 SIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIIS 206
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y SG EAFRLF M + F+ ++ A A L+ + G +H+ +K G+ +
Sbjct: 207 GYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQ 266
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D+F+S ALID+YSKCG +D VFD + +K +V WNS+I GY L+G EEA +L
Sbjct: 267 DIFVSCALIDMYSKCGSLEDAHCVFDEMPDKT---IVGWNSIIAGYALHGYSEEALDL-- 321
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
++EM SG + TFS ++ + +AS+ +
Sbjct: 322 -----------------------------YHEMRDSGVKMDHFTFSIIIRICSRLASVAR 352
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
K +H +++ GF DV TAL D Y+K G ++ +R VFDRM +N ISW ++ G
Sbjct: 353 AKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGN 412
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
G+ +E+I++FE+M + + PN +T L+VL ACS SGL ++G + F SM + +KP
Sbjct: 413 HGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAM 472
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
H+ C++++L R G L EA I PF+P +N WA+LL C+ + N ++ + A + L+ +
Sbjct: 473 HFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGM 532
Query: 650 AEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDH 709
E + Y++L NIY S+G+ +A +V + + KGLR CSW+EV NQ H F H
Sbjct: 533 EPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKH 592
Query: 710 N 710
+
Sbjct: 593 H 593
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 137/559 (24%), Positives = 237/559 (42%), Gaps = 108/559 (19%)
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDL--VVHNCMINANIQWGNLEEAQRLFDGMP----ER 116
L++ R +LE EI + +GF + ++ +INA I ++ +RL + M E
Sbjct: 106 LVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEP 165
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
++ ++ +K G + ++ F+ P +N +SW I G+V +G EA +LF+ +
Sbjct: 166 DQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMR 225
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
E TF+++ +A A + G + KAG + + V +LI + K G ++
Sbjct: 226 EEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLE 285
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A VFD M + +V W I IA Y GY
Sbjct: 286 DAHCVFDEMPDKTIVGWNSI-------------------------------IAGYALHGY 314
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EEA L+ +M K + FSI++ + L ++ VHA +++ G DV + A
Sbjct: 315 SEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTA 374
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
L+D YSK G+ D R VFD + ++ ++SWN++I GYG +G EEA ++F+
Sbjct: 375 LVDFYSKWGKVDDARHVFDRMSCRN---IISWNALIAGYGNHGHGEEAIDMFE------- 424
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
+ML G +PN TF +VL A + E+G
Sbjct: 425 ------------------------KMLREGMMPNHVTFLAVLSACSISGLFERG------ 454
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+++F +S R D + + M+ L G E+
Sbjct: 455 -------WEIF---------------QSMTR--DHKVKPRAMHFACMIELLGREGLLDEA 490
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG-RHYTCVV 595
L + K P ++L AC G ++ G K+ + E +Y ++P +Y ++
Sbjct: 491 YAL---IRKAPFQPTANMWAALLRACRVHGNLELG-KF--AAEKLYGMEPEKLSNYIVLL 544
Query: 596 DMLSRSGRLSEAEDFINSM 614
++ + SG+L EA D ++
Sbjct: 545 NIYNSSGKLKEAADVFQTL 563
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 222/506 (43%), Gaps = 82/506 (16%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQG-RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+++++ I C+ L I+G + L +++ G ++Y+ R+L+M++ +
Sbjct: 133 STYDALINACIGLKS--------IRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMI 184
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM-------------------- 113
+A + ++ + V +I+ + GN EA RLF M
Sbjct: 185 DACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASA 244
Query: 114 ------PERNEVSWT-------------ALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
P R S ALI + K G +E++ F+ P + ++ W +
Sbjct: 245 GLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNS 304
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I G+ +G+S EAL L+ ++ +SGVK + TFS I + C+ + V + + G
Sbjct: 305 IIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNG 364
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
F V +L+ K G+VD AR VFDRM R+++SW ++ + G EA +F+
Sbjct: 365 FGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFE 424
Query: 275 EMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASL 329
+M N V++ +++ + SG E + +F+ MTR + KP F+ ++ L
Sbjct: 425 KMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLG-- 482
Query: 330 KALRSGMHVHAHVLKIGIEKDVF--ISNALIDLYSKC---GETKDGRLVFDSIVEKDVAH 384
R G+ A+ L I K F +N L C G + G+ + + +
Sbjct: 483 ---REGLLDEAYAL---IRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEK 536
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSW-------SAIISGYLEHKQF 432
+ ++ ++ Y +G+++EA ++F + ++ SW A +SG H Q
Sbjct: 537 LSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQI 596
Query: 433 DLVFAVFNEMLLS----GEIPNKSTF 454
+ V +E++L+ G +P + F
Sbjct: 597 EKVVGKVDELMLNISKLGYVPEEQNF 622
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 338/666 (50%), Gaps = 97/666 (14%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
+HG LIKTGI K LTTR+++ + SR+ A+ F V + + +G
Sbjct: 24 IHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLAD--------FARCVFHEYHVCSFSFGE 75
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
+E+ W A+I HG+ +P Q
Sbjct: 76 VEDP------------FLWNAVIKSH-SHGK----------DPRQ--------------- 97
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
AL L +LE+GV ++ + S + KAC+ + + G+ + G + K G + +
Sbjct: 98 -----ALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQ 152
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE--RN 280
N LI L LK G + L+R +FDRM KRD VS+ ++D +++ G + AR +FD MP +N
Sbjct: 153 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 212
Query: 281 EVSWSVMIARYNQ-SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+SW+ MI+ Y Q S + A +LF M
Sbjct: 213 LISWNSMISGYAQTSDGVDIASKLFADMP------------------------------- 241
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
EKD+ N++ID Y K G +D + +FD + +DV V+W +MI GY G
Sbjct: 242 --------EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV---VTWATMIDGYAKLG 290
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+ AK LFD MP R+ V+++++++GY+++K +F++M + P+ +T VL
Sbjct: 291 FVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 350
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A + L K D+H I++ F LG AL D Y+K G I+ + VF+ + +K+
Sbjct: 351 PAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID 410
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W M+ GLA G + + ++ ++E+ S+ P+++T + VL ACSHSGLV +GL F M
Sbjct: 411 HWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELM 470
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ I+P +HY C+VD+LSRSG + A++ I MP EP+ W + L+ C +K +
Sbjct: 471 RRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFET 530
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E K+L A +P+ YVLLSN+YAS G W D VR +M E+ + K GCSW+E+
Sbjct: 531 GELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDG 590
Query: 699 QVHFFF 704
+VH FF
Sbjct: 591 RVHEFF 596
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 199/484 (41%), Gaps = 94/484 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V G +HG L KTG+ + +L L+ +YL + ++ + D
Sbjct: 120 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 179
Query: 87 LVVHNCMINANIQWGNLEEAQRLFD----------------------------------G 112
V +N MI+ ++ G + A+ LFD
Sbjct: 180 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 239
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
MPE++ +SW ++I G++KHGR+E++ F+ P ++V++W I G+ + GF A LF
Sbjct: 240 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 299
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL-- 230
++ V V ++S+ + L +F + K E H+ ++ + + L
Sbjct: 300 DQMPHRDV----VAYNSMMAGYVQNKYHMEALEIFSDMEK---ESHLLPDDTTLVIVLPA 352
Query: 231 --KMGE----VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
++G +D+ + ++ ++D++ + G + A +F+ + ++ W
Sbjct: 353 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 412
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ MI G E AF + Q+ R S KP+ F VL+A
Sbjct: 413 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC------------------ 454
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNG 399
S G K+G L F+ + +E + H + M+ +G
Sbjct: 455 -----------------SHSGLVKEGLLCFELMRRKHKIEPRLQH---YGCMVDILSRSG 494
Query: 400 QMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSV 457
+E AK L + MP + NDV W ++ HK+F+ V ++L +G P+ S
Sbjct: 495 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 554
Query: 458 LCAS 461
+ AS
Sbjct: 555 MYAS 558
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/465 (38%), Positives = 264/465 (56%), Gaps = 10/465 (2%)
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-- 311
T ++DV + DLG A +F ++ E N ++ MI + + A +++M R
Sbjct: 50 TKMVDVCDKTEDLGYASLLFKQVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDP 109
Query: 312 -----FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
P+ F V+ + + L G VHAH+ K G + ++ + NALID+Y+KC
Sbjct: 110 ESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCAS 169
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
D VFD +VE+D +SWNS+I G+ GQM +A LFD MP R VSW+A+ISGY
Sbjct: 170 LLDAHKVFDGMVERDA---ISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGY 226
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+ VF +M + G P++ + SVL A A + +LE GK +H + G
Sbjct: 227 TRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKT 286
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ AL + Y+K G I + ++FD+M + ISW+ M+ GLA G A+E+I LF+ M+K
Sbjct: 287 SICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKA 346
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PN +T L +L AC+H+G ++GL YF+SM Y+I+P HY C+VD+L R+GRLS+
Sbjct: 347 KIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQ 406
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A D I MP +PDS W SLLS C+T+ N IA A+++L +L + YVLLSNIYA
Sbjct: 407 ALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYAD 466
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+W +RKL+ K ++K+ G S +++ N V F D P
Sbjct: 467 LAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQEFVSWDDSKP 511
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 148/283 (52%), Gaps = 7/283 (2%)
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
F E L+L E+ + P+ TF + K+C+ + + LG V + K G + ++++ N
Sbjct: 99 FYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMEN 158
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+LI + K + A VFD M +RD +SW I+ + +G + +A +FD MP R VS
Sbjct: 159 ALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVS 218
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W+ MI+ Y + G +A +FRQM +P+ VL A A L AL G +H +
Sbjct: 219 WTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCD 278
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
+ G+ + I NAL+++YSKCG +FD + + D V+SW++MIGG +G+ E
Sbjct: 279 RNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGD---VISWSTMIGGLANHGKARE 335
Query: 404 AKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
A ELF M K N +++ ++S ++ A F+ M
Sbjct: 336 AIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSM 378
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 65/358 (18%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++ + N +I+ + +L +A ++FDGM ER+ +SW ++ISG + G++ ++ F+ P
Sbjct: 153 NITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMP 212
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++ ++SWTA I G+ + G +AL +F ++ GV+P+E++ S+ ACA++ +G
Sbjct: 213 YRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKW 272
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + G + S+CN+L+ + K G + A +FD+M K DV+SW
Sbjct: 273 IHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISW------------ 320
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
S MI G EA LF++M + +PN F +LSA
Sbjct: 321 -------------------STMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSA 361
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A HA G+ A D SK D +E +V H
Sbjct: 362 CA-----------HAGFWNEGL--------AYFDSMSK-----------DYHIEPEVEH- 390
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDLVFAVFNEM 442
+ ++ G G++ +A ++ + MP + D W +++S H D+ +
Sbjct: 391 --YGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHL 446
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K +H +IK FL T + D K+ D+ + +F ++ + N + M+R +
Sbjct: 31 KSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYLYNAMIRAHTHN 90
Query: 531 GYAKESINLFEEM-------EKTSITPNELTILSVLFACSHSGLVDKGL-KYFNSMEPIY 582
+I ++EM + I P+ T V+ +C SGLV L K ++ +
Sbjct: 91 KVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSC--SGLVCYNLGKQVHAHLCKF 148
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
K N ++DM ++ L +A + M E D+ +W S++SG
Sbjct: 149 GPKSNITMENALIDMYTKCASLLDAHKVFDGM-VERDAISWNSIISG 194
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 260/470 (55%), Gaps = 40/470 (8%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS------FKPNTS 317
G AR +FD +P + ++ +I S P +A ++ +M R+S +P+
Sbjct: 56 GGTAHARLVFDRIPHPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKR 115
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
F VL A A++ A +G VHAHV+K G E D F+ NALI +++ CG+ +FD
Sbjct: 116 TFPFVLRACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGE 175
Query: 378 VEKD----------------------------VAHVVSWNSMIGGYGLNGQMEEAKELFD 409
+D V +VSWN MI Y G M A+ELFD
Sbjct: 176 AREDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFD 235
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
P R+ VSW+A+ISGY+ +F +M GE P+ T S+L A A ++
Sbjct: 236 GAPDRDVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDA 295
Query: 470 GKDLH----GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
G+ LH G+ ++G P V LG AL D YAK G + S+ VF M DKN +W ++
Sbjct: 296 GRRLHRFLSGRFSRIG-PSTV-LGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIG 353
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
GLA G+ E+I++F++M + ++ P+E+T ++VL ACSH G+VDKG +YFN M+ Y I+
Sbjct: 354 GLALHGHVTEAIDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIE 413
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
PN +HY C+VDMLSR+G L EA +FI +M EP+ W +LL C+ + ++AE A +
Sbjct: 414 PNVKHYGCMVDMLSRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQE 473
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
L K + +VLLSNIYAS G W+ + N+RKLM + G+ K GC+ V+
Sbjct: 474 LLKARSDASGDFVLLSNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVVD 523
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 197/483 (40%), Gaps = 115/483 (23%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE------S 178
+ G H R+ F+R P + + I G + +A+ ++ ++
Sbjct: 54 VRGGTAHARL-----VFDRIPHPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGG 108
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV+P++ TF + +ACA + G V + KAG E V N+LI + G++ A
Sbjct: 109 GVRPDKRTFPFVLRACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAA 168
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE----------------------- 275
++FD + D V+W+ ++ F GD+G AR +FDE
Sbjct: 169 AALFDGEAREDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMA 228
Query: 276 --------MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
P+R+ VSW+ MI+ Y + G ++A LF QM KP+T +LSA A
Sbjct: 229 PARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACA 288
Query: 328 SLKALRSGMHVH----AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+ +G +H +IG + NALID+Y+KCG VF + +K+V+
Sbjct: 289 DSGDMDAGRRLHRFLSGRFSRIG--PSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVS 346
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+WNS+IGG L+G + EA + VF +ML
Sbjct: 347 ---TWNSIIGGLALHGHVTEAID-------------------------------VFQKML 372
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
P++ TF +VL A + HG ++ G Y + Y
Sbjct: 373 QGNVKPDEITFVAVLVACS-----------HGGMVDKGHEYF----NLMQQRY------- 410
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
M + N + MV L+ +G KE+ FE + I PN + ++L AC
Sbjct: 411 --------MIEPNVKHYGCMVDMLSRAGLLKEA---FEFIGTMKIEPNPVIWRTLLGACR 459
Query: 564 HSG 566
G
Sbjct: 460 IHG 462
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 150/311 (48%), Gaps = 27/311 (8%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMY-----LGSRKSL---EANEIVKDLNGFDLVVHN 91
G +H H++K G + ++ L+ M+ LG+ +L EA E D V +
Sbjct: 133 GAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEARE--------DAVAWS 184
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
MI+ + G++ A+ LFD P ++ VSW +I+ + K G + + F+ P ++V+S
Sbjct: 185 AMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVS 244
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF----RLGLSVF 207
W A I G+V+ G +A++LF ++ G KP+ VT S+ ACA+ D RL +
Sbjct: 245 WNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLS 304
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + G + N+LI + K G + A VF M+ ++V +W I+ G +
Sbjct: 305 GRFSRIG--PSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVT 362
Query: 268 EARRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIV 322
EA +F +M + N E+++ ++ + G ++ F M RY +PN + +
Sbjct: 363 EAIDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCM 422
Query: 323 LSALASLKALR 333
+ L+ L+
Sbjct: 423 VDMLSRAGLLK 433
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 260/430 (60%), Gaps = 3/430 (0%)
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
V W+ +I+ +N+SG E + F M R S + VLSA K L GM VH
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
VL+ G+ D + NAL+D+Y++CG+ ++F+ + + +A SW S+I G +GQ+
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMA---SWTSVISGLVRSGQV 243
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+ A++LFD+MP+R+ ++W+A+I GY++ +F F M + ++ T SV+ A
Sbjct: 244 DRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTAC 303
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A + +LE G+ + +LG DVF+G AL D Y+K G IE + VF M ++++ +WT
Sbjct: 304 AQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWT 363
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ GLA +G +E+I++F M + TP+E+T + VL AC+H+GLVDKG ++F SM
Sbjct: 364 AIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEA 423
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
YNI P HY C++D+L R+G+L EA D I+ MP +P+S W +LL+ C+ Y N +I E
Sbjct: 424 YNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGEL 483
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A + L +L ++ Y+LLSN+YA + RW D +R+++ EKG++K GCS +E+ +H
Sbjct: 484 AAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIH 543
Query: 702 FFFQKTDHNP 711
F +P
Sbjct: 544 EFVAADRSHP 553
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 178/378 (47%), Gaps = 38/378 (10%)
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+ W A I G ++G + F+ ++ + VT+ S+ AC + D LG+ V
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ ++G V N+L+ + + G++D A +F+ M+ R + SWT ++ + G + A
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R +FD MPER+ ++W+ MI Y Q G +A FR M + + V++A A L
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
AL +G ++ ++GI+ DVF+ NALID+YSKCG + VF + +D +W
Sbjct: 307 GALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRD---KFTWT 363
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
++I G +NG+ EEA ++ F ML + + P
Sbjct: 364 AIILGLAVNGRGEEAIDM-------------------------------FYRMLRALQTP 392
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLG--FPYDVFLGTALTDTYAKSGDIESSRR 507
++ TF VL A ++KG++ + + P V G L D ++G ++ +
Sbjct: 393 DEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYG-CLIDVLGRAGKLKEALD 451
Query: 508 VFDRMPDK-NEISWTVMV 524
D+MP K N W ++
Sbjct: 452 TIDKMPMKPNSTIWGTLL 469
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 144/301 (47%), Gaps = 8/301 (2%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V N +++ + G+++ A LF+GM R+ SWT++ISG ++ G+V+ + F+ P
Sbjct: 195 DQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMP 254
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++ I+WTA I G+VQ G +AL+ F + V+ +E T S+ ACA++ G
Sbjct: 255 ERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEW 314
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + G + V V N+LI + K G ++ A VF M RD +WT I+ G
Sbjct: 315 ARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGR 374
Query: 266 LGEA----RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFS 320
EA R+ + +EV++ ++ +G ++ F MT Y+ P +
Sbjct: 375 GEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYG 434
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++ L L+ + + K+ ++ + I L+ G ++ G L + ++E
Sbjct: 435 CLIDVLGRAGKLKEALDT---IDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLEL 491
Query: 381 D 381
D
Sbjct: 492 D 492
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 175/383 (45%), Gaps = 38/383 (9%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L AR + D +P R + S ++ + EEA + +M +P+ F +L A
Sbjct: 5 LSRARSLLDGIPHRRGRAASSSVSGHG----AEEAVAGYVRMLAGGARPDAYTFPSLLKA 60
Query: 326 LASLKALRSGMH-----VHAHVLKIGIEKDVFISNALIDLY-SKCGETKDGRLVFDSIVE 379
A+ + +HAHV+K G+E + +++LI +Y ++ ++ + +
Sbjct: 61 AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLA 120
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN----DVSWSAIISGYLEHKQFDLV 435
V WN++I G+ +G+ E + F +M + + V++ +++S + K L
Sbjct: 121 TGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLG 180
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG------ 489
V +L SG +P++ ++++ D++ + + + +F G
Sbjct: 181 MQVHKRVLESGVLPDQRVENALV-------------DMYAECGDMDAAWVLFEGMQMRSM 227
Query: 490 ---TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
T++ +SG ++ +R +FD MP+++ I+WT M+ G + G ++++ F M+
Sbjct: 228 ASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQIC 287
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ +E T++SV+ AC+ G ++ G ++ IK + ++DM S+ G +
Sbjct: 288 KVRADEFTMVSVVTACAQLGALETG-EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIER 346
Query: 607 AEDFINSMPFEPDSNAWASLLSG 629
A D M D W +++ G
Sbjct: 347 ALDVFKDM-HNRDKFTWTAIILG 368
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/576 (34%), Positives = 304/576 (52%), Gaps = 64/576 (11%)
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
YF+R +V SW + I + G S E+L+ F + + +KPN TF K+C+ + D
Sbjct: 41 YFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFD 97
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G GFE + V ++LI + K G++ AR +FD + +R++V+WT ++
Sbjct: 98 LNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITG 157
Query: 260 FIEMGDLGEARRIFDE-MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+++ D EA +F E + E++E G EE + S
Sbjct: 158 YVQNDDAHEALMVFKEFLFEKSE-------------GNGEEVGTSVDSVAMIS------- 197
Query: 319 FSIVLSALASL--KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
VLSA + + KA+ G VH +K+G++K + + N L+D Y+KCGE R VFD
Sbjct: 198 ---VLSACSRVSNKAVSEG--VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDD 252
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ EKD VVSWNSMI Y NG +A E+F M K
Sbjct: 253 MAEKD---VVSWNSMIAVYAQNGLSTDAFEVFHGMLKAG--------------------- 288
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
G N+ T S++L A A +L G LH ++IK+G+ +V + T++ D Y
Sbjct: 289 ---------GGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMY 339
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K G E +R FD M +KN SWT M+ G G+A+E++++F +M + PN +T +
Sbjct: 340 CKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFI 399
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
SVL ACSH+G +++G ++FN+M YN++P HY C+VD+L R+G + EA + I SM
Sbjct: 400 SVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKV 459
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
D W SLL+ C+ +K+ ++AE + + L+KL + YVLL+NIYA AGRW D +
Sbjct: 460 RRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERM 519
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
R L+ ++GL K G S VE++ +VH F +P+
Sbjct: 520 RILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQ 555
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 210/435 (48%), Gaps = 53/435 (12%)
Query: 272 IFDEMPERNEV-SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+F++ +R +V SW+ +IA + G E+ R F M + KPN S F + + ++L
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
L SG H L G E D+F+S+ALID+YSKCG+ + R++FD I ++ +V+W S
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRN---IVTWTS 153
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
+I GY N EA +F K+F +F + +GE
Sbjct: 154 LITGYVQNDDAHEALMVF---------------------KEF-----LFEKSEGNGEEVG 187
Query: 451 KSTFS----SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
S S SVL A + V++ + +HG IK+G + + L D YAK G++ SR
Sbjct: 188 TSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSR 247
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP-NELTILSVLFACSHS 565
+VFD M +K+ +SW M+ A++G + ++ +F M K NE+T+ ++L AC+H
Sbjct: 248 KVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHE 307
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G + G+ + + + + N T ++DM + G+ A + + M E + +W +
Sbjct: 308 GALRVGMCLHDQVIKMGYVN-NVIMATSIIDMYCKCGQAEMARNAFDGMK-EKNVRSWTA 365
Query: 626 LLSGCKTYKNEQIAERAVKNLWKL--AEEHPAGYVLLSNIYASAG---------RWIDAM 674
+++G Y A A+ +++ A P Y+ ++ A+ RW +AM
Sbjct: 366 MIAG---YGMHGFAREALDVFYQMIWAGVKP-NYITFISVLAACSHAGFLEEGWRWFNAM 421
Query: 675 NVRKLMTEKGLRKSG 689
+ + E G+ G
Sbjct: 422 S-HEYNVEPGVEHYG 435
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 228/526 (43%), Gaps = 127/526 (24%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL V + +I+ + G L A+ LFD +P RN V+WT+LI+G++++ E++ F+
Sbjct: 116 DLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFL 175
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
F+ NG E G + V S+ AC+ +++ +
Sbjct: 176 FEKSEG----------NG------------EEVGTSVDSVAMISVLSACSRVSNKAVSEG 213
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V G+ K G +K + V N+L+ K GEV L+R VFD M ++DVVSW
Sbjct: 214 VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSW------------ 261
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFSIVLS 324
+ MIA Y Q+G +AF +F M + K N S +L
Sbjct: 262 -------------------NSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLL 302
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A ALR GM +H V+K+G +V ++ ++ID+Y KCG+ + R FD + EK+V
Sbjct: 303 ACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVR- 361
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
SW +MI GYG++G EA + VF +M+
Sbjct: 362 --SWTAMIAGYGMHGFAREALD-------------------------------VFYQMIW 388
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+G PN TF SVL A + LE+G + F A++ Y +E
Sbjct: 389 AGVKPNYITFISVLAACSHAGFLEEG-------------WRWF--NAMSHEYNVEPGVE- 432
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ MV L +GY KE+ NL + M+ + + + S+L AC
Sbjct: 433 --------------HYGCMVDLLGRAGYIKEAYNLIKSMK---VRRDFVLWGSLLAACR- 474
Query: 565 SGLVDKGLKYFN-SMEPIYNIKP-NGRHYTCVVDMLSRSGRLSEAE 608
+ K ++ S ++ + P N +Y + ++ + +GR + E
Sbjct: 475 ---IHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVE 517
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 51/310 (16%)
Query: 42 ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWG 101
+HG IK G+ K + LL Y + + ++ D+ D+V N MI Q G
Sbjct: 213 GVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNG 272
Query: 102 NLEEAQRLFDGM-----PERNEVSW----------------------------------- 121
+A +F GM + NEV+
Sbjct: 273 LSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMA 332
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T++I + K G+ E + F+ +NV SWTA I G+ +GF+ EAL +F +++ +GVK
Sbjct: 333 TSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVK 392
Query: 182 PNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
PN +TF S+ AC+ G F + + E V ++ L + G + A +
Sbjct: 393 PNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYN 452
Query: 241 VFDRME-KRDVVSWTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQ 293
+ M+ +RD V W +L +E+ ++ AR +F P + + V++A Y
Sbjct: 453 LIKSMKVRRDFVLWGSLLAACRIHKDVELAEI-SARELFKLDP--SNCGYYVLLANIYAD 509
Query: 294 SGYPEEAFRL 303
+G ++ R+
Sbjct: 510 AGRWKDVERM 519
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 311/618 (50%), Gaps = 67/618 (10%)
Query: 97 NIQWGNLEEAQRLFDGMPER-NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
N+++G + A + + N V +LI+ + K ++ + F+ +NV+SW A
Sbjct: 40 NLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGAL 99
Query: 156 ICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
+ G+ NG E L+LF ++ ++PNE F++I +C++ G G K+G
Sbjct: 100 MAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSG 159
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
H V N+LI + + +V A SV+ + DV S+ +I++ +E
Sbjct: 160 LVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLE------------ 207
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+GYP EA + +M + + + LK LR
Sbjct: 208 -------------------NGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRL 248
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G+ VH + + G E D F+S+A+ID+Y KCG + R VF+ + K+ VVSW +++
Sbjct: 249 GLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKN---VVSWTAILAA 305
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y NG EEA F EM + G +PN+ TF
Sbjct: 306 YSQNGCFEEALNFFP-------------------------------EMEVDGLLPNEYTF 334
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
+ +L + A +++L GK LH +I K GF + +G AL + Y+KSG IE++ +VF M
Sbjct: 335 AVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMIC 394
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++ I+W+ M+ GL+ G +E++ +F+EM P+ +T + VL AC+H G V +G Y
Sbjct: 395 RDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYY 454
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
N + I+P HYTC+V +L ++GRL EAE+F+ S P + D AW +LLS C ++
Sbjct: 455 LNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQ 514
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N + ++ + + ++ Y+LLSN+YA A RW + +RKLM E+ ++K G SW+
Sbjct: 515 NYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWI 574
Query: 695 EVRNQVHFFFQKTDHNPK 712
E+RN +H F + +P+
Sbjct: 575 EIRNSIHVFVSEGKTHPE 592
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 175/436 (40%), Gaps = 86/436 (19%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E F + I +C + V++G HG+ +K+G+ +Y+ L+ MY
Sbjct: 129 EYIFATIISSC-------SDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVK 181
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM-------------------- 113
A + ++ G D+ +N +IN ++ G EA + D M
Sbjct: 182 GAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCS 241
Query: 114 -------------------PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
E + +A+I + K G + + F R +NV+SWTA
Sbjct: 242 HLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTA 301
Query: 155 AICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
+ + QNG EAL F ++ G+ PNE TF+ + +CA I+ G + I K+G
Sbjct: 302 ILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSG 361
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
FE H+ V N+LI + K G ++ A VF M RD ++W
Sbjct: 362 FEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITW--------------------- 400
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
S MI + G EA +F++M P+ F VLSA A L +++
Sbjct: 401 ----------SAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQE 450
Query: 335 GMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G + ++K GIE V ++ L K G + S K VV+W +++
Sbjct: 451 GFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVK--WDVVAWRTLLS 508
Query: 394 G------YGLNGQMEE 403
YGL ++ E
Sbjct: 509 ACHVHQNYGLGKKVAE 524
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 201/683 (29%), Positives = 323/683 (47%), Gaps = 129/683 (18%)
Query: 24 CLCLLKDITSQNLVIQGRALHGHLIKTGI-HKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
C LL+ T+ QG+ LH H+I I YL T+L Y G
Sbjct: 62 CGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGC------------- 108
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
G + +A+ +FDG+ +N W +I G+
Sbjct: 109 ------------------GLMSQAEVIFDGIVLKNSFLWNFMIRGY-------------- 136
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
NG ++L L+ ++L G + + T+ + KAC ++ +
Sbjct: 137 -----------------ASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEI 179
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V + G E + V NSL+ + + +
Sbjct: 180 GRRVHSEVVVCGLESDIYVGNSLLAM-------------------------------YAK 208
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GD+G AR +FD M ER+ SW+ MI+ Y ++ AF +F M + + + +
Sbjct: 209 FGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGL 268
Query: 323 LSALASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
LSA A LKA++ G +H + ++ I + F +N+LI++Y C
Sbjct: 269 LSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNC----------------- 311
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
N M+ +A+ LF+ + ++ VSW+++I GY + +F
Sbjct: 312 -------NCMV----------DARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRR 354
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M L G P++ TF +VL A +A+L G +H ++K GF + +GTAL D Y+K G
Sbjct: 355 MALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGS 414
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ SRRVFD MPDK+ +SW+ MV G G +E+I++ + M+ S+ P+ S+L A
Sbjct: 415 LACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSA 474
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH+GLV +G + F ME YN+KP HY+C+VD+L R+G L EA I +M +P S+
Sbjct: 475 CSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSD 534
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
WA+LL+ + +KN ++AE + + ++ + + + Y+ LSNIYA+ RW D VR ++
Sbjct: 535 IWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVR 594
Query: 682 EKGLRKSGGCSWVEVRNQVHFFF 704
KGL+KS GCS++E+ N VH F
Sbjct: 595 RKGLKKSPGCSFIELDNMVHRFL 617
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/539 (33%), Positives = 279/539 (51%), Gaps = 68/539 (12%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL LF +++ + P+ TF +CA + + L+FK +SLIT
Sbjct: 106 ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLIT 165
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ G + AR++FDE+P R+ VSW+ M
Sbjct: 166 -------------------------------AYARCGLVASARKVFDEIPHRDSVSWNSM 194
Query: 288 IARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
IA Y ++G EA +FR+M R F+P+ +L A L L G V V++ G
Sbjct: 195 IAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERG 254
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ + +I +ALI +Y+KCGE +E A+
Sbjct: 255 MTLNSYIGSALISMYAKCGE----------------------------------LESARR 280
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
+FD M R+ ++W+A+ISGY ++ D +F+ M NK T ++VL A A++ +
Sbjct: 281 IFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGA 340
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L+ GK + + GF +D+F+ TAL D YAKSG +++++RVF MP KNE SW M+
Sbjct: 341 LDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISA 400
Query: 527 LAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA G AKE+++LF+ M E PN++T + +L AC H+GLVD+G + F+ M ++ +
Sbjct: 401 LAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGL 460
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P HY+C+VD+L+R+G L EA D I MP +PD +LL C++ KN I ER ++
Sbjct: 461 VPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMR 520
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+ ++ + Y++ S IYA+ W D+ +R LM +KG+ K+ GCSW+EV N +H F
Sbjct: 521 MILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEF 579
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 197/438 (44%), Gaps = 80/438 (18%)
Query: 85 FDLVVH------NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
F L +H + +I A + G + A+++FD +P R+ VSW ++I+G+ K G E++
Sbjct: 149 FKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAV 208
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
F ++ G +P+E++ S+ AC E+
Sbjct: 209 EVFREMGRRD------------------------------GFEPDEMSLVSLLGACGELG 238
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
D LG V G + + G + + ++LI++ K GE++ AR +FD M RDV++W +
Sbjct: 239 DLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAV-- 296
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
I+ Y Q+G +EA LF M N
Sbjct: 297 -----------------------------ISGYAQNGMADEAILLFHGMKEDCVTANKIT 327
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
+ VLSA A++ AL G + + + G + D+F++ ALID+Y+K G + + VF +
Sbjct: 328 LTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMP 387
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM------PKRNDVSWSAIISGYLEHKQF 432
+K+ A SWN+MI +G+ +EA LF +M + ND+++ ++S +
Sbjct: 388 QKNEA---SWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLV 444
Query: 433 DLVFAVFNEM-LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
D + +F+ M L G +P +S ++ A L + DL K+ + P V LG
Sbjct: 445 DEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEK--PDKVTLGAL 502
Query: 492 LTDTYAKSGDIESSRRVF 509
L +K +++ RV
Sbjct: 503 LGACRSKK-NVDIGERVM 519
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 142/333 (42%), Gaps = 47/333 (14%)
Query: 42 ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWG 101
A H L K +H + + L+ Y A ++ ++ D V N MI + G
Sbjct: 143 AAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAG 202
Query: 102 NLEEAQRLFDGMPERN-----EVS------------------W----------------- 121
EA +F M R+ E+S W
Sbjct: 203 CAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIG 262
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALIS + K G +E + F+ ++VI+W A I G+ QNG + EA+ LF + E V
Sbjct: 263 SALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVT 322
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N++T +++ ACA I LG + + GF+ + V +LI + K G +D A+ V
Sbjct: 323 ANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRV 382
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER------NEVSWSVMIARYNQSG 295
F M +++ SW ++ G EA +F M + N++++ +++ +G
Sbjct: 383 FKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAG 442
Query: 296 YPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALA 327
+E +RLF M T + P +S ++ LA
Sbjct: 443 LVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLA 475
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 150/332 (45%), Gaps = 9/332 (2%)
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM-P 412
+ L+ L +C TK + V +V H + + + L + LF ++ P
Sbjct: 24 AECLVFLAKQCSSTKTLQQVHTQMVVNSSIHTPNNHLLSKAIHLK-NFPYSSLLFSHIAP 82
Query: 413 KRNDVSWSAIISGYLEH-KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
ND +++ +I + L ++F+ M+ P+ TF + A++ASL
Sbjct: 83 HPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHAC 142
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
H + KL D +L YA+ G + S+R+VFD +P ++ +SW M+ G A++G
Sbjct: 143 AAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAG 202
Query: 532 YAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
A+E++ +F EM + P+E++++S+L AC G ++ G ++ + N
Sbjct: 203 CAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELG-RWVEGFVVERGMTLNSYI 261
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
+ ++ M ++ G L A + M D W +++SG Y +A+ A+ +
Sbjct: 262 GSALISMYAKCGELESARRIFDGMAAR-DVITWNAVISG---YAQNGMADEAILLFHGMK 317
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
E+ + SA I A+++ K + E
Sbjct: 318 EDCVTANKITLTAVLSACATIGALDLGKQIDE 349
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 110/283 (38%), Gaps = 71/283 (25%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR + G +++ G+ Y+ + L+ MY + A I + D++ N +I+ Q
Sbjct: 243 GRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQ 302
Query: 100 WGNLEEAQRLFDGMPE----RNEVSWTALISG---------------------------- 127
G +EA LF GM E N+++ TA++S
Sbjct: 303 NGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFV 362
Query: 128 -------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--S 178
+ K G ++ + F+ P +N SW A I +G + EAL LF + +
Sbjct: 363 ATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGG 422
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G +PN++TF + AC G +F D+
Sbjct: 423 GARPNDITFVGLLSACVHAGLVDEGYRLF----------------------------DMM 454
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
++F + K + ++ ++D+ G L EA + +MPE+ +
Sbjct: 455 STLFGLVPK--IEHYSCMVDLLARAGHLYEAWDLIRKMPEKPD 495
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/493 (37%), Positives = 266/493 (53%), Gaps = 44/493 (8%)
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM----GDLGEARRIFDEMPERN 280
LI L G V AR V + + T +++ I M G L EAR +FDEMP+RN
Sbjct: 22 LIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRN 81
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MI+ Y+ S +A M R +PN +S VL A L LR +H
Sbjct: 82 VVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR---QLHG 138
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+LK+G+E DVF+ +ALID YSK GE D VF N MI G
Sbjct: 139 SILKVGLESDVFVRSALIDTYSKLGEQHDALNVF--------------NEMITG------ 178
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ V W++II G+ ++ D ++ M + + ++ST +SVL A
Sbjct: 179 --------------DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRA 224
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM-PDKNEIS 519
+A LE G+ +H ++K + D+ L AL D Y K G +E + +F RM +K+ IS
Sbjct: 225 CTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVIS 282
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W+ M+ GLA++G++ +++ LFE M+ PN +TIL VLFACSH+GLV+ G YF SM+
Sbjct: 283 WSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMK 342
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
+ I P HY C++D+L R+G+L EA I+ M EPD+ W LL C+ +KN +A
Sbjct: 343 EHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLA 402
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
A K + KL Y+LLSNIYA++ +W D VR+ M +G++K GCSW+EV Q
Sbjct: 403 IYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQ 462
Query: 700 VHFFFQKTDHNPK 712
VH F + +P+
Sbjct: 463 VHAFILGDNSHPR 475
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 174/361 (48%), Gaps = 48/361 (13%)
Query: 71 KSLEA---NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
K++EA N + D + ++ C++ +Q L + +F E LI+
Sbjct: 2 KAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVH-EHVFSNGYEPKTFLINTLINM 60
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
++K G ++E+ F+ P +NV+SWT I + + + +AL + +L GV+PN T+
Sbjct: 61 YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
SS+ +AC + + R + G I K G E V V ++LI K+GE A +VF+ M
Sbjct: 121 SSVLRACDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMIT 177
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
D+V W I+ F + D +E L+++M
Sbjct: 178 GDLVVWNSIIGGFAQNSD-------------------------------GDETLHLYKRM 206
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
R F + S + VL A L L G VH HVLK ++D+ ++NAL+D+Y KCG
Sbjct: 207 KRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSL 264
Query: 368 KDGRLVFDSIV-EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAI 422
+D L+F ++ EKD V+SW++MI G NG +A +LF+ M PK N ++ +
Sbjct: 265 EDANLLFTRMMTEKD---VISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGV 321
Query: 423 I 423
+
Sbjct: 322 L 322
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 151/330 (45%), Gaps = 54/330 (16%)
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R + +S ++ A++ VH HV G E F+ N LI++Y K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ R +FD + +++ VVSW +MI Y +
Sbjct: 67 LDEARNLFDEMPDRN---VVSWTTMISAYS---------------------------NSN 96
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
L HK D + ML G PN T+SSVL A + +L + LHG I+K+G DV
Sbjct: 97 LNHKALDFLIL----MLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDV 149
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+ +AL DTY+K G+ + VF+ M + + W ++ G A++ E+++L++ M++
Sbjct: 150 FVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRA 209
Query: 547 SITPNELTILSVLFACSHSGLVDKG-------LKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
++ T+ SVL AC+ L++ G LKY + I N ++DM
Sbjct: 210 DFVADQSTLTSVLRACTGLALLELGRQVHVHVLKY--DQDLILN--------NALLDMYC 259
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ G L +A M E D +W+++++G
Sbjct: 260 KCGSLEDANLLFTRMMTEKDVISWSTMIAG 289
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 50/262 (19%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R LHG ++K G+ + ++ + L+ Y + +A + ++ DLVV N +I Q
Sbjct: 134 RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193
Query: 101 GNLEEAQRLFDGMP-------------------------------------ERNEVSWTA 123
+ +E L+ M +++ + A
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNA 253
Query: 124 LISGFMKHGRVEESMWYFERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
L+ + K G +E++ F R + +VISW+ I G QNGFS +ALKLF + G KP
Sbjct: 254 LLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKP 313
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV------CNSLITLSLKMGEVD 236
N +T + AC+ GL G + ++H + +I L + G++D
Sbjct: 314 NYITILGVLFACSHA-----GLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLD 368
Query: 237 LARSVFDRM-EKRDVVSWTVIL 257
A + M + D V+W ++L
Sbjct: 369 EAVKLIHEMNHEPDAVTWRILL 390
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 283/540 (52%), Gaps = 68/540 (12%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
L L+ ++ + PN TF + ACA + + R+ +FK G + NS++T
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ + GE G AR++FDE+ E++ VSW+ +
Sbjct: 161 MYFRCGEN-------------------------------GVARKVFDEITEKDLVSWNSL 189
Query: 288 IARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
++ Y + G+ EA +F ++ S F+P+ VL A L L G V V++ G
Sbjct: 190 LSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERG 249
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
++ + +I +ALI +YSKCGE + ++
Sbjct: 250 MKVNSYIGSALISMYSKCGE----------------------------------LVSSRR 275
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
+FD MP R+ ++W+A IS Y ++ D ++F+ M +G PNK T ++VL A AS+ +
Sbjct: 276 IFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGA 335
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L+ GK + G +D+F+ TAL D YAK G +ES++RVF+ MP KN+ SW M+
Sbjct: 336 LDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISA 395
Query: 527 LAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA G AKE+++LFE M E S PN++T +S+L AC H+GLVD+G + F+ M ++ +
Sbjct: 396 LASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGL 455
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P HY+C+VD+LSR+G L EA D I MP +PD+ +L S C+ KN I ER ++
Sbjct: 456 VPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQ 515
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L +L + Y++ S IY + W DA +R LM E G+ K+ GCSW+EV NQ+ F
Sbjct: 516 MLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFL 575
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 191/380 (50%), Gaps = 45/380 (11%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEIND 199
F+ ++++SW + + G+ + GF+ EA+++F +L E SG +P+E++ S+ AC E+ D
Sbjct: 175 FDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGD 234
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG V G + + G + + + ++LI++ K GE
Sbjct: 235 LELGRWVEGFVVERGMKVNSYIGSALISMYSKCGE------------------------- 269
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
L +RRIFD MP R+ ++W+ I+ Y Q+G +EA LF M PN
Sbjct: 270 ------LVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTL 323
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ VLSA AS+ AL G + + G++ D+F++ ALID+Y+KCG + + VF+ +
Sbjct: 324 TAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPR 383
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM------PKRNDVSWSAIISGYLEHKQFD 433
K+ A SWN+MI +G+ +EA LF+ M + ND+++ +++S + D
Sbjct: 384 KNDA---SWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVD 440
Query: 434 LVFAVFNEM-LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+ +F+ M L G +P +S ++ + L + D+ K+ + P +V LG AL
Sbjct: 441 EGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK--PDNVTLG-AL 497
Query: 493 TDTYAKSGDIESSRRVFDRM 512
+ +++ RV +
Sbjct: 498 HSACQRKKNVDIGERVIQML 517
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 184/424 (43%), Gaps = 63/424 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
R H + K G+ + + ++ MY ++ A ++ ++ DLV N +++ +
Sbjct: 136 ARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAK 195
Query: 100 WGNLEEAQRLFDGMPER-----NEVS------------------W--------------- 121
G EA +F + E +E+S W
Sbjct: 196 LGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSY 255
Query: 122 --TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
+ALIS + K G + S F+ P ++ I+W AAI + QNG + EA+ LF + E+G
Sbjct: 256 IGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENG 315
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V PN+VT +++ ACA I LG + G + + V +LI + K G ++ A+
Sbjct: 316 VDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQ 375
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER------NEVSWSVMIARYNQ 293
VF+ M +++ SW ++ G EA +F+ M + N++++ +++
Sbjct: 376 RVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVH 435
Query: 294 SGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+G +E +RLF M T + P +S ++ L+ L V + K+ + D
Sbjct: 436 AGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDV---IEKMPEKPDNV 492
Query: 353 ISNALIDLYSKCGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
A L+S C K+ G V ++E D + NS G Y ++ ++ E ++D
Sbjct: 493 TLGA---LHSACQRKKNVDIGERVIQMLLELDPS-----NS--GNYIISSKIYENLNMWD 542
Query: 410 NMPK 413
+ +
Sbjct: 543 DAAR 546
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 131/280 (46%), Gaps = 11/280 (3%)
Query: 412 PKRNDVSWSAIISGYLEH-KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
P ND +++ ++ + L ++++M PN TF V A A++ +
Sbjct: 77 PHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMA 136
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ H ++ KLG D ++ Y + G+ +R+VFD + +K+ +SW ++ G A+
Sbjct: 137 RLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKL 196
Query: 531 GYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
G+A+E++ +F + E++ P+E++++SVL AC G ++ G ++ +K N
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELG-RWVEGFVVERGMKVNSY 255
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
+ ++ M S+ G L + + MP D W + +S Y +A+ A+ +
Sbjct: 256 IGSALISMYSKCGELVSSRRIFDGMP-SRDFITWNAAISA---YAQNGMADEAISLFHSM 311
Query: 650 AEE--HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
E P L + + A A I A+++ K M E +
Sbjct: 312 KENGVDPNKVTLTAVLSACAS--IGALDLGKQMDEYATHR 349
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 14/217 (6%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
SLF E + T +L S + G+ + + G+ + ++ T L+ MY
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMY 365
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER------NEVS 120
A + D+ + N MI+A G +EA LF+ M + N+++
Sbjct: 366 AKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDIT 425
Query: 121 WTALISGFMKHGRVEESMWYFER-----NPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+ +L+S + G V+E F+ + ++ + + G +EA + K+
Sbjct: 426 FVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKM 485
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
E KP+ VT ++ AC + +G V ++ +
Sbjct: 486 PE---KPDNVTLGALHSACQRKKNVDIGERVIQMLLE 519
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 300/594 (50%), Gaps = 66/594 (11%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V W +L+S + + G + ++ F+ P ++ ISW + I G + NG ++F +L ES
Sbjct: 90 VVWNSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYES 149
Query: 179 GV-KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
G+ + ++ T +++ AC + + + L+F G+E+ ++V N+LIT
Sbjct: 150 GIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALIT---------- 199
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
+ G RR+FDEM E+N V+W+ +I+ +Q +
Sbjct: 200 ---------------------SYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFY 238
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EE+ +LF +M PN+ + L A + L+A+R G +H V K+G+ D+ I +AL
Sbjct: 239 EESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESAL 298
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+YSKCG +D +F+S E D VS ++ G NG EE+ ++F M K
Sbjct: 299 MDMYSKCGSLEDAWKIFESAEEVD---EVSMTVILVGLAQNGFEEESIQVFVKMVK---- 351
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+G + + + S++L SL GK +H I
Sbjct: 352 ---------------------------NGVVIDPNMISAILGVFGIDTSLALGKQIHSLI 384
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F + F+ L + Y+K GD++ S ++F MP +N +SW M+ A G ++
Sbjct: 385 IKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRAL 444
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
L+EEM + P ++T LS+L AC+H GLV+KG+ + SM Y I P HY CVVDM
Sbjct: 445 QLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDM 504
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
+ R+G L+EA+ FI +P +P W +LL C + N ++ + A L+ A E PA Y
Sbjct: 505 MGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPY 564
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+LL+NIY+S G+W + K M + G+ K G SW+E+ Q+H F + +P
Sbjct: 565 ILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHP 618
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 180/405 (44%), Gaps = 66/405 (16%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
ER ALI+ + + G F+ +NV++WTA I G Q F E+LKLF K
Sbjct: 188 EREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGK 247
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ + V PN +T+ S AC+ + R G + GL++K G + + ++L+ + K G
Sbjct: 248 MRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGS 307
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
++ A +F+ E+ D VS TVIL +G A Q+
Sbjct: 308 LEDAWKIFESAEEVDEVSMTVIL--------VGLA-----------------------QN 336
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G+ EE+ ++F +M + + + S +L +L G +H+ ++K + F++
Sbjct: 337 GFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVN 396
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
N LI++YSKCG+ D +F + +++ VSWNSMI + +G A +L++
Sbjct: 397 NGLINMYSKCGDLDDSIKIFCWMPQRN---SVSWNSMIAAFARHGNGSRALQLYE----- 448
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
EM L G P TF S+L A A V +EKG
Sbjct: 449 --------------------------EMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFL 482
Query: 475 GKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
+ K G + + D ++G + +++ +R+P+K I
Sbjct: 483 ESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGI 527
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 153/396 (38%), Gaps = 100/396 (25%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L L + + +GR +HG + K G+H
Sbjct: 259 TYLSSLMACSGLQAIREGRQIHGLVWKLGVH----------------------------- 289
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
FDL + + +++ + G+LE+A ++F+ E +EVS T ++
Sbjct: 290 --FDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVIL----------------- 330
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
G QNGF E++++F+K++++GV + S+I L
Sbjct: 331 --------------VGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLAL 376
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + LI K F + V N LI + K G++D + +F M +R+ VSW ++ F
Sbjct: 377 GKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFAR 436
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G+ A ++++EM R E W P F +
Sbjct: 437 HGNGSRALQLYEEM--RLEGVW-----------------------------PTDVTFLSL 465
Query: 323 LSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L A A + + GM + K GI + ++D+ + G + + + + EK
Sbjct: 466 LHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEK- 524
Query: 382 VAHVVSWNSMIGGYGLNGQME----EAKELFDNMPK 413
++ W +++G ++G E A +LF P+
Sbjct: 525 -PGILVWQALLGACSIHGNSEMGKYAANQLFLQAPE 559
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 41/282 (14%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+K G + V+N +IN + G+L+++ ++F MP+RN VSW ++I+ F +HG
Sbjct: 384 IIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHG----- 438
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
NG AL+L+ ++ GV P +VTF S+ ACA +
Sbjct: 439 ------------------------NG--SRALQLYEEMRLEGVWPTDVTFLSLLHACAHV 472
Query: 198 NDFRLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTV 255
G+ + K G + ++ + + G ++ A+ +R+ EK ++ W
Sbjct: 473 GLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQA 532
Query: 256 ILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+L EMG A ++F + PE + + ++ Y+ G +E R ++M
Sbjct: 533 LLGACSIHGNSEMGKYA-ANQLFLQAPE-SPAPYILLANIYSSEGKWKERARTIKKMKDM 590
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
T I + + MH HA ++ G+ ++F
Sbjct: 591 GVTKETGISWIEIEKQIHSFVVEDRMHPHAEII-YGVLGELF 631
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/593 (31%), Positives = 305/593 (51%), Gaps = 65/593 (10%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V L+ + K G + + F P ++ I++ A I G + G EAL+LF +
Sbjct: 169 VVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRRE 228
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV + TFSS+ + D LG + GL +A +V V N+L
Sbjct: 229 GVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNAL------------- 275
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
LD + + LG+ +++FDEM ER+ VS++VMI+ + +
Sbjct: 276 ------------------LDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGG 317
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A +LFR M F T ++ +LS +L ++ G +HA ++ G+ + F+ NALI
Sbjct: 318 MALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALI 377
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+YSKCG ++ AK +F + +S
Sbjct: 378 DMYSKCG----------------------------------MLDAAKTIFAYKSDKTAIS 403
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+A+I+G +++ Q + +F +M +G P+++T SS++ +S+S+A + G+ LH +
Sbjct: 404 WTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLT 463
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
K G VF G+AL D YAK G ++ + R F+ MP+KN I+W ++ A+ G AK +I
Sbjct: 464 KSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIR 523
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
+F+ M + P+ +T LSVL AC H+GL ++ +KYF+ M Y++ P HY+CV+D L
Sbjct: 524 MFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTL 583
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
R+G + + I+ MPFE D W+S+L C+ Y N+ +A A + L+ + YV
Sbjct: 584 GRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYV 643
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+LSNIYA AG W A V+K+M ++G++K G SWVE++ +++ F NP
Sbjct: 644 ILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQKIYMFSSNDHTNP 696
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/552 (23%), Positives = 248/552 (44%), Gaps = 76/552 (13%)
Query: 94 INANIQWGNLEEAQRLFDGMPERNEVSWTAL---ISGFMKHGRVEESMWYFERNPFQNVI 150
+N + G L A+++ D +PE++ + L + G + + + F +N
Sbjct: 44 LNYLVSSGRLAAARKVLDQVPEKSTLYLRFLNRILLGCSRSCDLSAAKALFSAAARRNAK 103
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+WT + +G +A+ LF +L G P++VT +++ + +G ++ +
Sbjct: 104 TWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTV----LNVPGCDVG-TLHPV 158
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ K GF V VCN+L LD + + G + A
Sbjct: 159 VTKLGFGASVVVCNTL-------------------------------LDAYCKQGFIAAA 187
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
RR+F EMP R+ ++++ MI ++ G EA LF M R + FS +L+ +
Sbjct: 188 RRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGM 247
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G +H ++ +VF++NAL+D YSKC D + +FD + E+D VS+N
Sbjct: 248 VDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERD---NVSYN 304
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
MI SW ++ + +F +M G
Sbjct: 305 VMISA----------------------CSW---------NRCGGMALQLFRDMQTLGFDR 333
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
++S+L + ++ ++ G+ +H ++I G + F+G AL D Y+K G +++++ +F
Sbjct: 334 RTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIF 393
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
DK ISWT ++ G ++G +E++ LF +M + ++P+ T S++ + S ++
Sbjct: 394 AYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIG 453
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
G + + ++ P+ + ++DM ++ G L EA N MP E +S W +++S
Sbjct: 454 IGRQLHAYLTKSGHM-PSVFSGSALLDMYAKCGCLDEAIRTFNEMP-EKNSITWNAVISA 511
Query: 630 CKTYKNEQIAER 641
Y + A R
Sbjct: 512 YAQYGQAKNAIR 523
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 194/483 (40%), Gaps = 107/483 (22%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++ V+N +++ + +L + ++LFD M ER+ VS+ +IS
Sbjct: 268 NVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISA------------------ 309
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
SW CG + AL+LF + G + ++S+ + ++G
Sbjct: 310 ----CSWNR--CGGM-------ALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGRQ 356
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + G V N+LI + K G +D A+++F + +SWT ++ +
Sbjct: 357 IHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCV---- 412
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
Q+G EEA +LF M R P+ + S ++ +
Sbjct: 413 ---------------------------QNGQNEEALQLFCDMRRAGLSPDRATCSSIMKS 445
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+SL + G +HA++ K G VF +AL+D+Y+KCG + F+ + EK+
Sbjct: 446 SSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKN---S 502
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
++WN++I Y GQ + A +FD+ ML
Sbjct: 503 ITWNAVISAYAQYGQAKNAIRMFDS-------------------------------MLHC 531
Query: 446 GEIPNKSTFSSVLCASASVASLE---KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G P+ TF SVL A E K DL + P+ + + DT ++G
Sbjct: 532 GLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMS-PWKEHY-SCVIDTLGRAGCF 589
Query: 503 ESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT---ILSV 558
+ ++V D MP + + I W+ ++ Y + + + ++ P + T ILS
Sbjct: 590 DKIQKVIDEMPFEDDPIIWSSILHSC--RIYGNQDLATVAAEKLFTMVPTDATAYVILSN 647
Query: 559 LFA 561
++A
Sbjct: 648 IYA 650
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 24/325 (7%)
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
FKP SI S LA + A ++K G + + ++ G R
Sbjct: 4 FKPTAGARSIA-SRLAG-----ASTPADARMVKAGSDPATYRLELHLNYLVSSGRLAAAR 57
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
V D + EK ++ N ++ G + + AK LF +RN +W+ ++ +
Sbjct: 58 KVLDQVPEKSTLYLRFLNRILLGCSRSCDLSAAKALFSAAARRNAKTWTIMMRMLPADGR 117
Query: 432 FDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
++F +ML GE P+ T ++VL +V + G LH + KLGF V +
Sbjct: 118 GSDAVSLFRDMLREGEASPDDVTITTVL----NVPGCDVGT-LHPVVTKLGFGASVVVCN 172
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
L D Y K G I ++RRVF MP ++ I++ M+ G + G E++ LF M + +
Sbjct: 173 TLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDT 232
Query: 551 NELTILSVLFACSHSGLVDKGL-----KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ T S+L +G+VD L F P N+ N ++D S+ L
Sbjct: 233 SHFTFSSLLTVA--TGMVDLHLGRQIHGLFVRANPSCNVFVN----NALLDFYSKCDSLG 286
Query: 606 EAEDFINSMPFEPDSNAWASLLSGC 630
+ + + M E D+ ++ ++S C
Sbjct: 287 DLKQLFDEMS-ERDNVSYNVMISAC 310
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 131/333 (39%), Gaps = 66/333 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR LH +L K+G + + LL MY +
Sbjct: 455 GRQLHAYLTKSGHMPSVFSGSALLDMY-------------------------------AK 483
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHG------RVEESMWYFERNPFQNVISWT 153
G L+EA R F+ MPE+N ++W A+IS + ++G R+ +SM + P
Sbjct: 484 CGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSV 543
Query: 154 AAICGFVQNGFSFEALKLF-LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
A CG NG + E +K F L + P + +S + F + +I +
Sbjct: 544 LAACG--HNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFD---KIQKVIDE 598
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDR---MEKRDVVSWTVILDVFIEMGDLGEA 269
FE + +S++ G DLA ++ M D ++ ++ +++ + G+ A
Sbjct: 599 MPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYVILSNIYAKAGNWEGA 658
Query: 270 RRIFDEMPERN----------EVSWSVMIARYNQSGYP------EEAFRLFRQMTRYSFK 313
R+ M +R E+ + + N P +E RL+ +M + ++
Sbjct: 659 ARVKKIMRDRGVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELERLYEEMDKQGYE 718
Query: 314 PNTSC----FSIVLSALASLKALRSGMHVHAHV 342
P+TSC S+V + + RSG H+
Sbjct: 719 PDTSCALHMVSMVFYCIHVDRPWRSGSESEIHI 751
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 297/567 (52%), Gaps = 67/567 (11%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGLSV 206
+V++W + + FV + AL+ + ++LE S P+ TF S+ K CA + +F++G +
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + K M D+ T +L+++ GDL
Sbjct: 102 HGQVVKY-------------------------------MLHSDLYIETTLLNMYAACGDL 130
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR +F+ M RN+V W+ MI+ Y ++ P EA L+++M F P+ + ++SA
Sbjct: 131 KSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A LK L GM +H+H+ ++ ++ + +AL+++Y+KCG+ K
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLK------------------ 232
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
A+++FD + ++ +WSA+I GY+++ + +F E+
Sbjct: 233 ----------------TARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276
Query: 447 EI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
+ PN+ T +V+ A A + LE G+ +H I + + V L +L D ++K GDI+++
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+R+FD M K+ ISW MV G A G +E++ F M+ T + P+E+T + VL ACSH+
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHA 396
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV +G K F +E +Y ++ HY C+VD+L R+G L+EA +FI MP +PD W S
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+L C+ Y N ++ E A + L KL + Y+LLSNIYA W + VR+LM EKG+
Sbjct: 457 MLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGI 516
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K+ GCS V + N H F +P+
Sbjct: 517 QKTPGCSSVVIDNIAHSFLAGDCSHPE 543
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 74/446 (16%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
LE + V D F ++ C + + G + Q + M + T L++ + G
Sbjct: 70 LERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQ-VVKYMLHSDLYIETTLLNMYAACG 128
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
++ + + FER +N + WT+ I G+++N EAL L+ K+ E G P+EVT +++
Sbjct: 129 DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVS 188
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
ACAE+ D +G+ + I E + +C V
Sbjct: 189 ACAELKDLGVGMKLHSHIR----EMDMKIC---------------------------AVL 217
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS- 311
+ +++++ + GDL AR++FD++ +++ +WS +I Y ++ EA +LFR++ S
Sbjct: 218 GSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSN 277
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+PN V+SA A L L +G VH ++ + V ++N+LID++SKCG+ +
Sbjct: 278 MRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK 337
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+FDS+ KD ++SWNSM+ G+ L+G EA
Sbjct: 338 RIFDSMSYKD---LISWNSMVNGFALHGLGREA--------------------------- 367
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT- 490
A F M + P++ TF VL A + +++GK L +I L Y V L +
Sbjct: 368 ----LAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEAL---YGVRLKSE 420
Query: 491 ---ALTDTYAKSGDIESSRRVFDRMP 513
+ D ++G + +R MP
Sbjct: 421 HYGCMVDLLCRAGLLAEAREFIRVMP 446
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 160/315 (50%), Gaps = 21/315 (6%)
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ K +AHV+S S+ GY A +F + + + ++W++++ ++
Sbjct: 13 LNKLIAHVLSMGSLGVGY--------AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQ 64
Query: 438 VFNEML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+ EML S +P++ TF S+L A + + GK LHG+++K D+++ T L + Y
Sbjct: 65 SYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMY 124
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
A GD++S+R +F+RM +N++ WT M+ G ++ E++ L+++ME+ +P+E+T+
Sbjct: 125 AACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMA 184
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
+++ AC+ + G+K + + + ++K + +V+M ++ G L A + +
Sbjct: 185 TLVSACAELKDLGVGMKLHSHIREM-DMKICAVLGSALVNMYAKCGDLKTARQVFDKLS- 242
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA-------GR 669
+ D AW++L+ G A + + + + P +L+ I A A GR
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302
Query: 670 WIDAMNVRKLMTEKG 684
W+ R T+KG
Sbjct: 303 WVHDYITR---TQKG 314
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F S ++ C LL+ G+ LHG ++K +H + Y+ T LL MY A
Sbjct: 81 TFPSLLKGCALLLE-------FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISG---- 127
+ + + + VV MI+ ++ EA L+ M E +EV+ L+S
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 128 -------------------------------FMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ K G ++ + F++ ++V +W+A I
Sbjct: 194 KDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALI 253
Query: 157 CGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
G+V+N S EAL+LF ++ S ++PNEVT ++ ACA++ D G V I +
Sbjct: 254 FGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK 313
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
VS+ NSLI + K G++D A+ +FD M +D++SW +++ F G EA F
Sbjct: 314 GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRL 373
Query: 276 MP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
M + +E+++ ++ + +G +E +LF ++
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEI 409
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 247/445 (55%), Gaps = 12/445 (2%)
Query: 277 PERNEVSWSVMI-----ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
P W+ +I AR +G +F +M + +P+ F +L + AS
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L G VHA +L+ G+ D F+ +LI +YS CG R VFD I + D+ SWNS+
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLP---SWNSI 136
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE---I 448
I G ++ A+ LF MP+RN +SWS +I+GY+ Q+ A+F EM + G
Sbjct: 137 INANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVR 196
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN+ T S VL A + +LE GK H I K G P DV LGTAL D YAK G +E + V
Sbjct: 197 PNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWV 256
Query: 509 FDRM-PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
F + P+K+ ++W+ M+ GLA G A+E + LF +M + PN +T L+V AC H GL
Sbjct: 257 FSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGL 316
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
V +G Y M Y+I P +HY C+VD+ R+GR+ EA + + SMP EPD W +LL
Sbjct: 317 VSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALL 376
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
SG + + + + E A+K L +L + YVLLSN+YA GRW D +VR LM G++K
Sbjct: 377 SGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKK 436
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNPK 712
GCS +EV +H FF D +P+
Sbjct: 437 VPGCSLIEVGGVLHEFFVGDDSHPE 461
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 179/389 (46%), Gaps = 51/389 (13%)
Query: 152 WTAAICGFVQ-----NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
W I VQ G + + +F+++ GV+P+ TF + ++ A + LG SV
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I + G V SLI++ G + AR VFD + + D+ SW I++ + G +
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS---FKPNTSCFSIVL 323
AR +F MPERN +SWS MI Y + G +EA LFR+M +PN S VL
Sbjct: 147 DMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVL 206
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDV 382
+A L AL G HA++ K G+ DV + ALID+Y+KCG + VF ++ KD
Sbjct: 207 AACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKD- 265
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
V++W++MI G ++G EE L F++M
Sbjct: 266 --VMAWSAMISGLAMHGLAEECVGL-------------------------------FSKM 292
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT----ALTDTYAK 498
+ G PN TF +V CA + +GKD ++ + Y + + D Y +
Sbjct: 293 INQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTE---DYSIIPTIQHYGCMVDLYGR 349
Query: 499 SGDIESSRRVFDRMP-DKNEISWTVMVRG 526
+G I+ + V MP + + + W ++ G
Sbjct: 350 AGRIKEAWNVVKSMPMEPDVLVWGALLSG 378
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 159/381 (41%), Gaps = 63/381 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL+ S +L+ GR++H +++ G+ + ++ T L+ MY A ++ ++ D
Sbjct: 70 LLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPD 129
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L N +INAN Q G ++ A+ LF MPERN +SW+ +I+G+++ G+ +E++ F
Sbjct: 130 LPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQM 189
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
V + V+PNE T S + AC + G
Sbjct: 190 LGV----------------------------NDVRPNEFTMSGVLAACGRLGALEHGKWA 221
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I K G V + +LI + K G V+ A VF +L
Sbjct: 222 HAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFS---------------------NL 260
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
G P ++ ++WS MI+ G EE LF +M +PN F V A
Sbjct: 261 G---------PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCAC 311
Query: 327 ASLKALRSGM-HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDVAH 384
+ G ++ I + ++DLY + G K+ V S+ +E D
Sbjct: 312 VHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPD--- 368
Query: 385 VVSWNSMIGGYGLNGQMEEAK 405
V+ W +++ G ++G +E +
Sbjct: 369 VLVWGALLSGSRMHGDIETCE 389
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 264/463 (57%), Gaps = 35/463 (7%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D V T +++++ L AR +FD +P+ N W+V+I Y +G E A +L+ QM
Sbjct: 109 DTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMF 168
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
Y P+ F VL A A+L A+ G +H HV++ G EKDVF+ ALID+Y+KCG
Sbjct: 169 DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCG--- 225
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+G A+E+FD + R+ V W+++++ Y +
Sbjct: 226 ----------------------CVG---------SAREVFDKILVRDAVLWNSMLAAYSQ 254
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ D ++ +EM+L+G P ++T + + ASA A+L +G++LHG + F +
Sbjct: 255 NGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKV 314
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
TAL D YAK G + +R +F+R+ K +SW M+ G A G+A E+++LFEEM + +
Sbjct: 315 KTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA- 373
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+ +T + VL ACSH GL+++G +F +M Y I P +HYTC+VD+L SGRL EA
Sbjct: 374 KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAY 433
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ I M PDS W +LL+ CK + N ++ E A++ L +L + YV+LSNIYA AG
Sbjct: 434 NLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAG 493
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+W +RKLMT++ L+KS CSW+EV+N+VH F +P
Sbjct: 494 KWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHP 536
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 165/360 (45%), Gaps = 38/360 (10%)
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
S E+ + + + ++ +C+ I+ G AQ G + V T L++ +
Sbjct: 62 SNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGF-GFDTVIATKLVNLY 120
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
+ + F+R P N+ W I G+ NG A++L+ ++ + G+ P+ TF
Sbjct: 121 CVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFP 180
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
+ KACA ++ G + + + G+EK V V +LI
Sbjct: 181 FVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALI---------------------- 218
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D++ + G +G AR +FD++ R+ V W+ M+A Y+Q+G+P+ L +M
Sbjct: 219 ---------DMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMV 269
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+P + +SA A AL G +H + E + AL+D+Y+KCG +
Sbjct: 270 LTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVR 329
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM---PKRNDVSWSAIISG 425
R +F+ + V VVSWN+MI GY ++G EA +LF+ M K + +++ ++S
Sbjct: 330 VARNLFERL---GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSA 386
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 163/376 (43%), Gaps = 20/376 (5%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+V D F V+ C + I+ G E + + E++ ALI + K G V +
Sbjct: 172 LVPDNFTFPFVLKACAALSAIEHGR-EIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSA 230
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F++ ++ + W + + + QNG L L +++ +G++P E T + A A+
Sbjct: 231 REVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADN 290
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
G + GL ++ FE H V +L+ + K G V +AR++F+R+ + VVSW ++
Sbjct: 291 AALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMI 350
Query: 258 DVFIEMGDLGEARRIFDEM---PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFK 313
+ G EA +F+EM + + +++ +++ + G EE + F M R Y
Sbjct: 351 TGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKID 410
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P ++ ++ L L ++ ++++ + D + AL++ + G +
Sbjct: 411 PTVQHYTCMVDLLGHSGRLDEAYNL---IMQMKVLPDSGVWGALLNSCKIHANVELGEIA 467
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSW-------SA 421
+ ++E + ++ + Y G+ E +L M R SW A
Sbjct: 468 LERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHA 527
Query: 422 IISGYLEHKQFDLVFA 437
+SG H D +++
Sbjct: 528 FLSGDTSHPLSDEIYS 543
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%)
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P S ++S+L + + +++ GK LH ++ GF +D + T L + Y + S+R +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FDR+P N W V++RG A +G + ++ L+ +M + P+ T VL AC+ +
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 569 DKG 571
+ G
Sbjct: 193 EHG 195
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 219/706 (31%), Positives = 335/706 (47%), Gaps = 107/706 (15%)
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
LT + Y S L A I L + V N +++ + +L QR+F+ + +
Sbjct: 60 LTACANLRYAASGNQLHAYSIQTGLKAYTHV-GNTLLSFYAKSKDLVSVQRVFNEIENPD 118
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
SWT L+S K G++ + F + P + W A I G +N + AL LF ++ +
Sbjct: 119 VYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQ 178
Query: 178 SGVKPNEVTFSSICKACA-EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
GV+ ++ TF+S+ C+ E+ DF G V L+ K GF SV N+L+T+ G+V
Sbjct: 179 LGVRHDKYTFASVLSLCSLELLDF--GREVHTLVIKTGFLVRASVINALLTMYFNSGKVA 236
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A VF+ E TV ++++++VMI G
Sbjct: 237 DAYEVFEEAES------TV-----------------------HDDITFNVMIGGLASVGR 267
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EEA +F++M +P F +S ++S + R VHA +K+G E +SNA
Sbjct: 268 DEEALIMFKEMQEACLRPTELTF---VSVMSSCSSARVSHQVHAQAIKMGFEACTPVSNA 324
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY--------------------- 395
+ +YS CG +VFD + EKD ++SWN +I Y
Sbjct: 325 AMTMYSSCGNLHAVHMVFDRLEEKD---LISWNIIIMNYAQGNFYRLAILAFLQMQRAGI 381
Query: 396 ------------------------------GLNGQMEEAKEL----------------FD 409
GLN ++E + L F+
Sbjct: 382 EPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFN 441
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
NM N +SW+ IISG+L + F E+L+S PN T S VL AS+++L
Sbjct: 442 NMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRH 501
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
GK +HG I++ G LG AL YAK GD++ S R+F+ M ++ +SW M+ A+
Sbjct: 502 GKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQ 561
Query: 530 SGYAKESINLFEEMEKT-SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G KE+++ F+ M+ + + P++ T +VL ACSH+GLVD G + FNSM Y +P
Sbjct: 562 HGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGA 621
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
H +C+VD+L R+G L EAE INS + S+ W +L S C + N ++ L +
Sbjct: 622 DHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLE 681
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+ + PA YVLLSNIYA+AG+W +A N R LM + + K GCSW+
Sbjct: 682 IEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWI 727
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 228/490 (46%), Gaps = 46/490 (9%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFR 201
+N + +I + ++ + +++LF+++ S +KP+ T SS ACA +
Sbjct: 11 KNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAA 70
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G + + G + + V N+L++ K ++ + VF+ +E DV SWT +L
Sbjct: 71 SGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACT 130
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
++G +G A +F++ P V W+ +I ++ + E A LFR+M + + + F+
Sbjct: 131 KLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFAS 190
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLS L SL+ L G VH V+K G + NAL+ +Y G+ D VF+ E
Sbjct: 191 VLS-LCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEE-AEST 248
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V +++N MIGG G+ EEA +F E
Sbjct: 249 VHDDITFNVMIGGLASVGRDEEA-------------------------------LIMFKE 277
Query: 442 MLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M + P + TF SV+ C+SA V+ +H + IK+GF + A Y+
Sbjct: 278 MQEACLRPTELTFVSVMSSCSSARVS-----HQVHAQAIKMGFEACTPVSNAAMTMYSSC 332
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G++ + VFDR+ +K+ ISW +++ A+ + + +I F +M++ I P+E TI S+L
Sbjct: 333 GNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLL 392
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
+ +V K F ++ + +V S+ G++ +A N+M P+
Sbjct: 393 ASSESLEIV----KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMS-SPN 447
Query: 620 SNAWASLLSG 629
+W +++SG
Sbjct: 448 LISWNTIISG 457
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 215/524 (41%), Gaps = 108/524 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG--FDLVVHNCMINAN 97
GR +H +IKTG + LL MY S K +A E+ ++ D + N MI
Sbjct: 203 GREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGL 262
Query: 98 IQWGNLEEAQRLFDGMPER----NEVSWTALISG-------------------------- 127
G EEA +F M E E+++ +++S
Sbjct: 263 ASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARVSHQVHAQAIKMGFEACTPVS 322
Query: 128 ------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ G + F+R +++ISW I + Q F A+ FL++ +G++
Sbjct: 323 NAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIE 382
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+E T S+ + + ++ L+ K G + V N+L++ K G+++ A V
Sbjct: 383 PDEFTIGSLLASSESLEIVKM---FQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQV 439
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+ M +++SW I+ F+ +N G+ +
Sbjct: 440 FNNMSSPNLISWNTIISGFL-----------------------------FN--GFTLQGL 468
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
F ++ + KPN SIVLS AS+ ALR G +H ++L+ G+ + NALI +Y
Sbjct: 469 EQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMY 528
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG+ +F+ + +D +VSWN+MI Y +G+ +EA F M V
Sbjct: 529 AKCGDLDWSLRIFNVMNGRD---IVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVK--- 582
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-L 480
P+++TF++VL A + ++ G + ++
Sbjct: 583 ---------------------------PDQATFTAVLSACSHAGLVDDGTRIFNSMVNDY 615
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK--NEISWTV 522
GF + + D ++G +E + R+ + K + I WT+
Sbjct: 616 GFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTL 659
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
G+ +HG+++++G+ L L+ MY + I +NG D+V N MI+A
Sbjct: 501 HGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYA 560
Query: 99 QWGNLEEAQRLFDGMPER-----NEVSWTALISGFMKHGRVEESMWYFER-------NPF 146
Q G +EA F M + ++ ++TA++S G V++ F P
Sbjct: 561 QHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPG 620
Query: 147 QNVISWTAAICGFVQNGFSFEALKLF----LKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ +S + G + G+ EA +L LK++ S + ++ ACA + RL
Sbjct: 621 ADHLSCIVDLLG--RAGYLEEAERLINSKHLKIVSS-------IWWTLFSACAAHGNLRL 671
Query: 203 GLSVFGLIFK 212
G V G + +
Sbjct: 672 GRIVAGFLLE 681
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/659 (31%), Positives = 327/659 (49%), Gaps = 100/659 (15%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TALI+ + K G ++ +M F+ P +N ++WTA I G+ Q G AL+LF K+ GV+
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVR 212
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ +S AC+ + G G ++ E SV N+LI L K + LAR
Sbjct: 213 PDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLAR-- 270
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
++FD M RN VSW+ MIA Y Q+ EA
Sbjct: 271 -----------------------------KLFDCMENRNLVSWTTMIAGYMQNSCDAEAM 301
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN------ 355
+F Q+++ ++P+ + +L++ SL A+ G VHAH +K +E D ++ N
Sbjct: 302 AMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMY 361
Query: 356 -------------------------ALIDLYSKCGET---------------KDGRLVFD 375
A+I+ YS+ G+ K L F
Sbjct: 362 AKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFV 421
Query: 376 SIV-----------EKDVAHVV----------SWNSMIGGYGLNGQMEEAKELFDNMPKR 414
S++ K + ++ + +S+I Y +E+AK +F+ M R
Sbjct: 422 SLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNR 481
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ V W+A+I G +++Q + +FN++ +SG PN+ TF +++ ++++ S+ G+ H
Sbjct: 482 DMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFH 541
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
+IIK G D + AL D YAK G I+ R +F+ K+ I W M+ A+ G A+
Sbjct: 542 AQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAE 601
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++ +F M T + PN +T + VL AC+H+GLVD+GL++F+ M+ Y I+P HY V
Sbjct: 602 EALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASV 661
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
V++ RSG+L A++FI MP EP + W SLLS C + N +I A + + LA+
Sbjct: 662 VNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATE-MALLADPAD 720
Query: 655 AG-YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G VL+SNIYAS G W DA +R+ M G+ K G SW+EV +VH F + +P+
Sbjct: 721 SGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPE 779
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 233/523 (44%), Gaps = 72/523 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF--LKLLESGVK 181
L+ + K GRV ++ F+R P +N++SW +AI Q+G +A+ LF + G
Sbjct: 52 LLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEA 111
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PNE +S +ACA+ G V G+ + G + +V V +LI L K+G +D A V
Sbjct: 112 PNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLV 171
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD + ++ V+WT ++ + ++G G A
Sbjct: 172 FDALPVKNPVTWTAVITGYSQIGQGG-------------------------------VAL 200
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF +M +P+ + +SA ++L L G H + +I +E D + NALIDLY
Sbjct: 201 ELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLY 260
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KC R +FD + ++ +VSW +MI GY N EA +F + + W
Sbjct: 261 CKCSRLSLARKLFDCMENRN---LVSWTTMIAGYMQNSCDAEAMAMFWQLSQEG---WQ- 313
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
P+ +S+L + S+A++ +G+ +H IK
Sbjct: 314 ---------------------------PDVFACASILNSCGSLAAIWQGRQVHAHAIKAN 346
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D ++ +L D YAK + +R VF+ + + + IS+ M+ G + G +I++F
Sbjct: 347 LESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFS 406
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M S+ P+ LT +S+L S ++ K + + + + ++D+ S+
Sbjct: 407 KMRYCSLKPSPLTFVSLLGVSSSQSAIELS-KQIHGLIVKSGTSLDLYAGSSLIDVYSKF 465
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ +A+ N M D W +++ G +NEQ E AVK
Sbjct: 466 SLVEDAKAVFNLM-HNRDMVIWNAMIFGLA--QNEQ-GEEAVK 504
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 183/383 (47%), Gaps = 38/383 (9%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D+ ++L + ++G + +ARR+FD MP +N VSW I+ + Q G E+A LF
Sbjct: 45 DLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQ 104
Query: 309 RYSF--KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
R S PN + L A A +A+ G VH ++IG++ +V++ ALI+LY+K G
Sbjct: 105 RASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGC 164
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
LVFD++ K+ V+W ++I GY GQ A ELF M
Sbjct: 165 IDAAMLVFDALPVKN---PVTWTAVITGYSQIGQGGVALELFGKMG-------------- 207
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
L G P++ +S + A +++ LE G+ HG ++ D
Sbjct: 208 -----------------LDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDA 250
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ AL D Y K + +R++FD M ++N +SWT M+ G ++ E++ +F ++ +
Sbjct: 251 SVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQE 310
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
P+ S+L +C + +G + ++ N++ + ++DM ++ L+E
Sbjct: 311 GWQPDVFACASILNSCGSLAAIWQG-RQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTE 369
Query: 607 AEDFINSMPFEPDSNAWASLLSG 629
A ++ E D+ ++ +++ G
Sbjct: 370 ARAVFEALA-EDDAISYNAMIEG 391
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 159/344 (46%), Gaps = 41/344 (11%)
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
S + + ++LS LA + R HA + G D+F++N L+ YSK G +D
Sbjct: 6 SVQTHGGLAQLLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRD- 64
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
A+ LFD MP +N VSW + IS + +H
Sbjct: 65 ---------------------------------ARRLFDRMPHKNLVSWGSAISMHAQHG 91
Query: 431 QFDLVFAVFN--EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ A+F + GE PN+ +S L A A ++ G+ +HG +++G +V++
Sbjct: 92 CEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYV 151
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GTAL + YAK G I+++ VFD +P KN ++WT ++ G ++ G ++ LF +M +
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGV 211
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+ + S + ACS G ++ G + I ++ + ++D+ + RLS A
Sbjct: 212 RPDRFVLASAVSACSALGFLEGGRQTHGYAYRI-AVETDASVINALIDLYCKCSRLSLAR 270
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
+ M + +W ++++G Y A+ W+L++E
Sbjct: 271 KLFDCME-NRNLVSWTTMIAG---YMQNSCDAEAMAMFWQLSQE 310
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 200/496 (40%), Gaps = 69/496 (13%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
C +L S + QGR +H H IK + + Y+ L+ MY EA + + L
Sbjct: 318 ACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEAL 377
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM----------------------------- 113
D + +N MI + G+L A +F M
Sbjct: 378 AEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSK 437
Query: 114 ----------PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ + ++LI + K VE++ F ++++ W A I G QN
Sbjct: 438 QIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNE 497
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EA+KLF +L SG+ PNE TF ++ + + G I KAG + V N
Sbjct: 498 QGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSN 557
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ER 279
+LI + K G + R +F+ +DV+ W ++ + + G EA +F M E
Sbjct: 558 ALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEP 617
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N V++ +++ +G +E R F M T+Y+ +P T ++ V++ RSG +
Sbjct: 618 NYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFG-----RSG-KL 671
Query: 339 HAH---VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
HA + ++ IE + +L+ G + GR + + D A M Y
Sbjct: 672 HAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIY 731
Query: 396 GLNGQMEEAKELFDNMP-----KRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEML 443
G +A++L M K SW + I+ EH + D+++++ +E+
Sbjct: 732 ASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELT 791
Query: 444 L----SGEIPNKSTFS 455
G +P+ S +
Sbjct: 792 SILKNGGYLPDTSELT 807
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/707 (28%), Positives = 343/707 (48%), Gaps = 105/707 (14%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL-NGFDLVVHNCMINA 96
+ GR +HG++I+ + YL T L+ MY + +EA + L N ++V N MI
Sbjct: 564 MAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGG 623
Query: 97 NIQWGNLEEAQRLFDGMPERN------------------EV------------------- 119
++ G E++ L+ N EV
Sbjct: 624 FVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD 683
Query: 120 --SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
T+L++ + K G VE++ F++ + V A I F+ NG +++AL L+ K+
Sbjct: 684 PYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKA 743
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
+ T SS+ C+ + + G +V + K + +V++ ++L+T+ K G +
Sbjct: 744 GETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTED 803
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A SV F M ER+ V+W MIA + Q+
Sbjct: 804 ADSV-------------------------------FYTMKERDVVAWGSMIAGFCQNRRF 832
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
++A LFR M + K ++ + V+SA L+ + G +H +K G+E DVF++ +L
Sbjct: 833 KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 892
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+YSK G E A+ +F +MP +N V
Sbjct: 893 VDMYSKFGFA----------------------------------ESAEMVFSSMPNKNLV 918
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+W+++IS Y + ++ + ++L G + + ++VL A +SVA+L KGK LH
Sbjct: 919 AWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQ 978
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
I+L P D+ + AL D Y K G ++ ++ +F+ MP +N ++W M+ G G +E++
Sbjct: 979 IRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAV 1038
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF+EM+++ P+E+T L+++ +CSHSG+V++GL F M Y ++P HY VVD+
Sbjct: 1039 RLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDL 1098
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L R+GRL +A FI MP + D + W LL C+ ++N ++ E NL K+ + Y
Sbjct: 1099 LGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNY 1158
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
V L N+Y W A N+R M +GL+KS GCSW+EV+N+V FF
Sbjct: 1159 VPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFF 1205
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 213/475 (44%), Gaps = 63/475 (13%)
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I VQ G +AL+L K S + + TF S+ K CA +++ G ++ I G
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+ + SLI + +K G + A VFD+M E RD D+ +
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAP-----DITV------------- 514
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
W+ +I Y + G+ EE F +M +P+ SIVL L +
Sbjct: 515 ---------WNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMA 565
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G +H ++++ E D ++ ALI +YS C + +F + ++ +++V+WN MIGG
Sbjct: 566 GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKL--ENRSNIVAWNVMIGG 623
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
+ NG E++ EL+ +++ LV A F T
Sbjct: 624 FVENGMWEKSLELYS----------------LAKNENCKLVSASF-------------TG 654
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
+ C+ V L+ G+ +H +IK+ F D ++ T+L YAKSG +E +++VFD++ D
Sbjct: 655 AFTACSHGEV--LDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
K M+ +G A +++ L+ +M+ + TI S+L CS G D G +
Sbjct: 713 KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFG-RT 771
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++ +++ N + ++ M + G +A+ +M E D AW S+++G
Sbjct: 772 VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK-ERDVVAWGSMIAG 825
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 146/342 (42%), Gaps = 41/342 (11%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+P+ E+ V +Y+Q A L + + F +L ASL L G
Sbjct: 407 LPQVEEIKALVQQGKYSQ------ALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHG 460
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE-KDVA-HVVSWNSMIG 393
+HA ++ +G++ D +I+ +LI++Y KCG VFD + E +D A + WN +I
Sbjct: 461 RTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVID 520
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
GY G EE A F M G P+ +
Sbjct: 521 GYFKYGHFEEG-------------------------------LAQFCRMQELGIRPDGYS 549
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
S VL ++ G+ +HG II+ F D +L TAL Y+ + +F ++
Sbjct: 550 LSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLE 609
Query: 514 DK-NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
++ N ++W VM+ G E+G ++S+ L+ + + + ACSH ++D G
Sbjct: 610 NRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGR 669
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ + + N + + T ++ M ++SG + +A+ + +
Sbjct: 670 QVHCDVIKM-NFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV 710
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L ++S +++G+ LH + I+ I + + L+ MY+ A I +++ +
Sbjct: 958 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 1017
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFE 142
LV N MI GN EEA RLF M +EV++ ALI+ G VEE + F+
Sbjct: 1018 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQ 1077
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 200/632 (31%), Positives = 321/632 (50%), Gaps = 47/632 (7%)
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
+RK L+ +IVK + G LVV + +E ++L + + +S
Sbjct: 298 ARKLLDERKIVK-VPGLALVVTRSFVM-------MEAVKKLHAHLVVSGLHNCQYAMSKV 349
Query: 129 MKHGRVEESMWYFERNPFQNVIS-----WTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
++ +++S F F+ + S W + G Q+ +A+ + K E G+KP+
Sbjct: 350 IRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPD 409
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+TF + KACA+ + G + + K GF + V NSLI L
Sbjct: 410 NMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHL--------------- 454
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ GDL AR IFDEM ++ VSW+ +I Y+Q +E L
Sbjct: 455 ----------------YAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLAL 498
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F M + + V+SA L + ++ + IE DV++ N LID Y +
Sbjct: 499 FELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCR 558
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G+ + VF + +K+ V+ N+MI Y G + AK++FD +P ++ +SWS++I
Sbjct: 559 IGQLQSAEKVFSQMKDKNT---VTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMI 615
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
Y + F +F +M + P+ +SVL A A + +L+ GK +H + +
Sbjct: 616 CAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIK 675
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D + +L D +AK G ++ + +VF M +K+ +SW ++ GLA +G+ E++N+F M
Sbjct: 676 TDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSM 735
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
PNE+T L VL AC++ LV +GL +F M+ ++N++P +HY CVV +LSR+G+
Sbjct: 736 LTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSRAGQ 795
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L +A++FIN MP PD W LL CKT+ N +AE A K L +L + Y+LLSNI
Sbjct: 796 LEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLLSNI 855
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
YASA RW DA+NVR+ M + +RKS CS V+
Sbjct: 856 YASADRWSDALNVRQWMADTAVRKSPACSVVD 887
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 188/318 (59%), Gaps = 1/318 (0%)
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+VVSWN +I G+ G++E A+ LFD MP RN VSW+ +I GY + A+F M+
Sbjct: 5 NVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMM 64
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G P++ T +V+ A +++ + G+ LHG +K G D +G +L D YAK G ++
Sbjct: 65 AGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQ 124
Query: 504 SSRRVFDRMPDK-NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+S +VFD M D+ N +SWT ++ G A G + E++ LF EM + I PN +T LSV+ AC
Sbjct: 125 NSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINAC 184
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH GLV++GL +F SM YNI P +H+ C++DML R+GRL EAE I +P E +
Sbjct: 185 SHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIV 244
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W LL C Y ++ +RA+K + L E + +LSN+ GR+ DA RKL+ E
Sbjct: 245 WRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDE 304
Query: 683 KGLRKSGGCSWVEVRNQV 700
+ + K G + V R+ V
Sbjct: 305 RKIVKVPGLALVVTRSFV 322
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 256/581 (44%), Gaps = 88/581 (15%)
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
MP +N VSW +I+GF G +E + F++ P +NV+SWT I G+ + EA+ LF
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
++ G+ P+E+T ++ A + + +G + G K G V NSLI L K+
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 233 GEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVM 287
G V + VFD M ++R++VSWT I+ F G EA +F EM N +++ +
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSV 180
Query: 288 IARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
I + G E+ F+ M Y+ P F ++ L R+G A + G
Sbjct: 181 INACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLG-----RAGRLCEAEQIIEG 235
Query: 347 --IEKDVFISNALIDLYSKCGETKDGRLVFDSIVE---KDVAHVVSWNSMIGGYGLNGQM 401
+E +V + L+ SK GE + G+ I + + ++++ G
Sbjct: 236 LPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDA 295
Query: 402 EEAKELFDN-------------------MPKRNDVSWSAIISG-----YLEHK------- 430
E+A++L D M + ++SG Y K
Sbjct: 296 EQARKLLDERKIVKVPGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYAL 355
Query: 431 -QFDLVFA--VFNEM----------LLSGEI---------------------PNKSTFSS 456
Q DLVFA VF ++ LL G P+ TF
Sbjct: 356 QQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPF 415
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL A A + ++G+ +H +IKLGF D+F+ +L YA GD+ +R +FD M K+
Sbjct: 416 VLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKD 475
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG---LVDKGLK 573
+SW ++ G ++ KE + LFE M+ + +++T++ V+ AC+H G + D ++
Sbjct: 476 VVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVR 535
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
Y +I+ + ++D R G+L AE + M
Sbjct: 536 YIER----NHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQM 572
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 219/497 (44%), Gaps = 102/497 (20%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +H H+IK G D+ V N +I+
Sbjct: 428 EGEQMHSHVIKLGFL-------------------------------LDIFVSNSLIHLYA 456
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
G+L A+ +FD M ++ VSW +LI G Y +RN F+
Sbjct: 457 ACGDLVCARSIFDEMLVKDVVSWNSLIGG------------YSQRNRFK----------- 493
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
E L LF + V+ ++VT + AC + D+ + + I + E
Sbjct: 494 --------EVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVD 545
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V + N+LI ++G++ A VF +M+ ++ V+ ++ + + G+L A++IFD++P
Sbjct: 546 VYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPN 605
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
++ +SWS MI Y+Q+ + ++ LFRQM R KP+ + VLSA A L AL G +
Sbjct: 606 KDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWI 665
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H +V + I+ D + N+LID+++KCG ++ VF + EKD +SWNS+I G N
Sbjct: 666 HDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKD---TLSWNSIILGLANN 722
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G +EA +F ML G PN+ TF VL
Sbjct: 723 GFEDEA-------------------------------LNIFYSMLTEGPRPNEVTFLGVL 751
Query: 459 CASASVASLEKGKDLHGKIIKLGF---PYDVFLGTALTDTYAKSGDIESSRRVFDRMP-D 514
A A+ +++G D H + +K P G + +++G +E ++ + MP
Sbjct: 752 IACANKRLVQEGLD-HFERMKTVHNLEPQMKHYG-CVVGILSRAGQLEKAKNFINEMPLA 809
Query: 515 KNEISWTVMVRGLAESG 531
+ + W +++ G
Sbjct: 810 PDPVVWRILLGACKTHG 826
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/627 (30%), Positives = 311/627 (49%), Gaps = 97/627 (15%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+++ NC++ + G+LE+A +LFD M + N VS T +IS + + G ++
Sbjct: 116 VLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLD----------- 164
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+A+ LF ++LESG KP ++++ K+ +G +
Sbjct: 165 --------------------KAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQI 204
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ +AG + S+ T I++++++ G L
Sbjct: 205 HAHVIRAGLCSNASI-------------------------------ETGIVNMYVKCGWL 233
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
A+R+FD+M + V+W+ ++ Y Q+G +A +LF + + ++ FS+VL A
Sbjct: 234 VGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKAC 293
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
ASL+ LR G +HA V K+G+E +V + L+D Y KC
Sbjct: 294 ASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCS--------------------- 332
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
E A F + + NDVSWSAIISGY + QF+ F +
Sbjct: 333 -------------SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 379
Query: 447 EIP-NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
+ N T++S+ A + +A G +H IK + +AL Y+K G ++ +
Sbjct: 380 AVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 439
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF+ M + + ++WT + G A G A E++ LFE+M + PN +T ++VL ACSH+
Sbjct: 440 HEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHA 499
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV++G Y ++M YN+ P HY C++D+ +RSG L EA F+ +MPFEPD+ +W
Sbjct: 500 GLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKC 559
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LSGC T+KN ++ + A + L +L E AGYVL N+Y AG+W +A V KLM E+ L
Sbjct: 560 FLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERML 619
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K CSW++ + ++H F H+P+
Sbjct: 620 KKELSCSWIQEKGKIHRFIVGDKHHPQ 646
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 194/502 (38%), Gaps = 128/502 (25%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK + + + GR +H H+I+ G L S S+E
Sbjct: 188 LLKSLVNPRALDIGRQIHAHVIRAG---------------LCSNASIETG---------- 222
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
++N ++ G L A+R+FD M + V+WT L+ G+ + GR
Sbjct: 223 ------IVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRAR----------- 265
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ALKLF+ L+ GV+ + FS + KACA + + R G +
Sbjct: 266 --------------------DALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQI 305
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ K G E VSV L+ +K + A F + + + VSW+ I+ + +M
Sbjct: 306 HACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 365
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EA + F + +N V N+ ++ + A
Sbjct: 366 EEAVKTFKSLRSKNAVVL------------------------------NSFTYTSIFQAC 395
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ L G VHA +K + + +ALI +YSKCG D VF+S+ D +V
Sbjct: 396 SVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPD---IV 452
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+W + I G+ G EA LF+ +M+ G
Sbjct: 453 AWTAFISGHAYYGNASEALRLFE-------------------------------KMVSCG 481
Query: 447 EIPNKSTFSSVLCASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
PN TF +VL A + +E+GK L + K + + D YA+SG ++ +
Sbjct: 482 MKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 541
Query: 506 RRVFDRMP-DKNEISWTVMVRG 526
R MP + + +SW + G
Sbjct: 542 LRFMKNMPFEPDAMSWKCFLSG 563
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 209/688 (30%), Positives = 325/688 (47%), Gaps = 79/688 (11%)
Query: 20 YIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV 79
++E+ + + + + ++NLV ++ G + + RLLI E +V
Sbjct: 245 FVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLIS--------EEEGLV 296
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
D+ V+ C ++ G + G+ E V+ +L+ + K G + E+
Sbjct: 297 PDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVN-NSLVDMYSKCGYLGEARA 355
Query: 140 YFERNPFQNVISWTAAICGFVQNG---FSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
F+ N +NV+SW I G+ + G FE L+ + E V+ NEVT ++ AC+
Sbjct: 356 LFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQR--EEKVRVNEVTVLNVLPACSG 413
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ + G F+ GF K V N+ + K +D A VF ME + V S
Sbjct: 414 EHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSS---- 469
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
W+ +I + Q+G+P ++ LF M P+
Sbjct: 470 ---------------------------WNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDR 502
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+L A A LK LR G +H +L+ G+E D FI +L+ LY +C G+L+FD
Sbjct: 503 FTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFD- 561
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
M ++ V W+ +I+G+ +++
Sbjct: 562 ---------------------------------KMENKSLVCWNVMITGFSQNELPCEAL 588
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
F +ML G P + + VL A + V++L GK++H +K D F+ AL D Y
Sbjct: 589 DTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMY 648
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
AK G +E S+ +FDR+ +K+E W V++ G G+ ++I LFE M+ P+ T L
Sbjct: 649 AKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFL 708
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
VL AC+H+GLV +GLKY M+ +Y +KP HY CVVDML R+G+L+EA +N MP
Sbjct: 709 GVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPD 768
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
EPDS W+SLLS C+ Y + +I E K L +L YVLLSN+YA G+W + V
Sbjct: 769 EPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKV 828
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
R+ M E GL K GCSW+E+ V+ F
Sbjct: 829 RQRMKENGLHKDAGCSWIEIGGMVYRFL 856
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 146/561 (26%), Positives = 248/561 (44%), Gaps = 72/561 (12%)
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
L A ++ D V C A+++ G A L G V ALI+ + K G
Sbjct: 186 LSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVG-NALIAMYGKCG 244
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL---ESGVKPNEVTFSS 189
VE ++ FE +N++SW + + +NG E +F +LL E G+ P+ T +
Sbjct: 245 FVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVT 304
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ ACA + + R+G+ V GL FK G + V+V NSL+ + K G + AR++FD ++
Sbjct: 305 VIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKN 364
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
VVSW I+ W Y++ G F L ++M R
Sbjct: 365 VVSWNTII--------------------------WG-----YSKEGDFRGVFELLQEMQR 393
Query: 310 -YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+ N VL A + L S +H + + G KD ++NA + Y+KC
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLD 453
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
VF + K V+ SWN++IG + NG
Sbjct: 454 CAERVFCGMEGKTVS---SWNALIGAHAQNG---------------------------FP 483
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
K DL F M+ SG P++ T S+L A A + L GK++HG +++ G D F+
Sbjct: 484 GKSLDL----FLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFI 539
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G +L Y + + + +FD+M +K+ + W VM+ G +++ E+++ F +M I
Sbjct: 540 GISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGI 599
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P E+ + VL ACS + G K +S ++ + ++DM ++ G + +++
Sbjct: 600 KPQEIAVTGVLGACSQVSALRLG-KEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQ 658
Query: 609 DFINSMPFEPDSNAWASLLSG 629
+ + + E D W +++G
Sbjct: 659 NIFDRVN-EKDEAVWNVIIAG 678
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 204/454 (44%), Gaps = 71/454 (15%)
Query: 116 RNEVSW-TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
RN+V T +I+ + G +S F+ +++ + A + G+ +N +A+ LFL+
Sbjct: 125 RNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLE 184
Query: 175 LLE-SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
LL + + P+ T + KACA + D LG +V L KAG V N+LI + K G
Sbjct: 185 LLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCG 244
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW-SVMIARYN 292
F+E A ++F+ M RN VSW SVM A
Sbjct: 245 --------------------------FVE-----SAVKVFETMRNRNLVSWNSVMYACSE 273
Query: 293 QSGYPE--EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
G+ E F+ P+ + V+ A A++ +R GM VH K+GI ++
Sbjct: 274 NGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEE 333
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
V ++N+L+D+YSKCG + EA+ LFD
Sbjct: 334 VTVNNSLVDMYSKCG----------------------------------YLGEARALFDM 359
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSSVLCASASVASLEK 469
+N VSW+ II GY + F VF + EM ++ N+ T +VL A + L
Sbjct: 360 NGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLS 419
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
K++HG + GF D + A YAK ++ + RVF M K SW ++ A+
Sbjct: 420 LKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQ 479
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+G+ +S++LF M + + P+ TI S+L AC+
Sbjct: 480 NGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACA 513
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/535 (25%), Positives = 230/535 (42%), Gaps = 106/535 (19%)
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
++E+ A ++ + K ++ + F + V SW A I QNGF ++L LFL +
Sbjct: 434 KDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVM 493
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
++SG+ P+ T S+ ACA + R G + G + + G E + SL++L ++ +
Sbjct: 494 MDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSM 553
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
L + +FD+ME + +V W +VMI ++Q+
Sbjct: 554 LLGKLIFDKMENKSLVCW-------------------------------NVMITGFSQNE 582
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
P EA FRQM KP + VL A + + ALR G VH+ LK + +D F++
Sbjct: 583 LPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTC 642
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
ALID+Y+KCG + + +FD + EKD A WN +I GYG++G +A ELF+ M +
Sbjct: 643 ALIDMYAKCGCMEQSQNIFDRVNEKDEA---VWNVIIAGYGIHGHGLKAIELFELMQNK- 698
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
G P+ TF VL A + +G G
Sbjct: 699 ------------------------------GGRPDSFTFLGVLIACNHAGLVTEGLKYLG 728
Query: 476 KIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGYA 533
++ L G + + D ++G + + ++ + MPD+ + W+ ++ G
Sbjct: 729 QMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYG-- 786
Query: 534 KESINLFEEMEKT--SITPNE---LTILSVLFACSHSGLVDKGLKYFNSMEPIYN-IKPN 587
+ + EE+ K + PN+ +LS L+A GL ++ + + +K N
Sbjct: 787 --DLEIGEEVSKKLLELEPNKAENYVLLSNLYA---------GLGKWDEVRKVRQRMKEN 835
Query: 588 GRHYTC----------VVDMLSRSGRLSEA----------EDFINSMPFEPDSNA 622
G H V L G LSE+ E I+ + ++PD++
Sbjct: 836 GLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSC 890
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 40/294 (13%)
Query: 319 FSIVLSALASLKALRSGMHVHAHV-LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
I+L A K + G VHA V + DV +S +I +YS CG D R VFD+
Sbjct: 95 IGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAA 154
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
E K+LF ++A++SGY + F +
Sbjct: 155 KE-------------------------KDLF---------LYNALLSGYSRNALFRDAIS 180
Query: 438 VFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F E+L + ++ P+ T V A A VA +E G+ +H +K G D F+G AL Y
Sbjct: 181 LFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMY 240
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM---EKTSITPNEL 553
K G +ES+ +VF+ M ++N +SW ++ +E+G E +F+ + E+ + P+
Sbjct: 241 GKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVA 300
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
T+++V+ AC+ G V G+ + + I +VDM S+ G L EA
Sbjct: 301 TMVTVIPACAAVGEVRMGM-VVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEA 353
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 131/301 (43%), Gaps = 37/301 (12%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVH-------NC-MINANIQWGNLEEAQRLFDGMPERNE 118
LG+ + A + K+++ F L H C +I+ + G +E++Q +FD + E++E
Sbjct: 610 LGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDE 669
Query: 119 VSWTALISGFMKHGRVEESMWYFE----RNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
W +I+G+ HG +++ FE + + ++ + G E LK +L
Sbjct: 670 AVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLK-YLG 728
Query: 175 LLES--GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
+++ GVKP ++ + L L+ + E + +SL++
Sbjct: 729 QMQNLYGVKPKLEHYACVVDMLGRAGQLTEALK---LVNEMPDEPDSGIWSSLLSSCRNY 785
Query: 233 GEVDLARSVFDR---MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN-----EVSW 284
G++++ V + +E ++ ++ +++ +G E R++ M E SW
Sbjct: 786 GDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSW 845
Query: 285 ---SVMIARYNQS-GYPEEA-------FRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
M+ R+ S G E+ +L +++++ +KP+TSC L +K L+
Sbjct: 846 IEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILK 905
Query: 334 S 334
S
Sbjct: 906 S 906
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/469 (36%), Positives = 264/469 (56%), Gaps = 13/469 (2%)
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T I+ V G A R+F +P N + MI Y Q+ +A ++ +M R
Sbjct: 46 TQIVHVCNGHGRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPD 105
Query: 314 PNTS---------CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
P++S + +L A L A + G VHAHV + G E + N+LI++Y++C
Sbjct: 106 PSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRC 165
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G+ R VFD + EKD VSWN++I + GQM +A+ELF +MP + VSW+A++S
Sbjct: 166 GDLSLARKVFDGMREKDA---VSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVS 222
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
GY F VF +M + G P+ + +VL A A + +LE G+ ++ K G
Sbjct: 223 GYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLG 282
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
+++ AL + YAK G IE + ++F M +K+ ISW+ + GLA G A+E++ LFE M+
Sbjct: 283 KIYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMD 342
Query: 545 KTS-ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + PN +T + +L ACSH+GL+D+GL+YF+ M+ Y ++P+ HY CVVD+L RSGR
Sbjct: 343 REGRVMPNGITFVGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGR 402
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
+ A D I MP PD W SLLS C+++ + A A + L +L E V+L+N+
Sbjct: 403 IQRALDTIGGMPIPPDGKIWGSLLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANV 462
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YA+AGRW + + RK + + RK+ GCS +EV N V F D P+
Sbjct: 463 YAAAGRWGNVASTRKEIRSRSTRKTPGCSMIEVDNVVREFVAGEDLGPE 511
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 184/393 (46%), Gaps = 43/393 (10%)
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP-------- 182
HGR + F P N+ A I + QN +A+++++++L P
Sbjct: 55 HGRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSV 114
Query: 183 -NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ T+ + KAC + +LG V + ++G E H V NSLI + + G++ LAR V
Sbjct: 115 GDRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKV 174
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M ++D VSW ++ MG + +AR +F MP++ VSW+ +++ Y G A
Sbjct: 175 FDGMREKDAVSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAV 234
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+FRQM F+P+ VL A A L AL G ++A+ K G+ ++I NAL+++Y
Sbjct: 235 EVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMY 294
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG ++ +F + EKD V+SW++ IGG +G+ EA +LF+ M + V
Sbjct: 295 AKCGCIEEALQLFHGMSEKD---VISWSTAIGGLAAHGRAREAVKLFEVMDREGRV---- 347
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KL 480
+PN TF +L A + L++G ++ +
Sbjct: 348 --------------------------MPNGITFVGLLSACSHAGLLDEGLRYFDRMKEEY 381
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
G V + D +SG I+ + MP
Sbjct: 382 GVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMP 414
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 129/246 (52%), Gaps = 6/246 (2%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+V N +I + G+L A+++FDGM E++ VSW LIS + G++ ++ F P +
Sbjct: 153 IVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLISAHARMGQMRKARELFHSMPDK 212
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
V+SWTA + G+ G A+++F ++ G +P++V+ ++ ACA++ LG ++
Sbjct: 213 TVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWIY 272
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
K G + +CN+L+ + K G ++ A +F M ++DV+SW+ + G
Sbjct: 273 AYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAR 332
Query: 268 EARRIFDEMPER-----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSI 321
EA ++F+ M N +++ +++ + +G +E R F +M Y +P+ +
Sbjct: 333 EAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGC 392
Query: 322 VLSALA 327
V+ L
Sbjct: 393 VVDLLG 398
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 211/674 (31%), Positives = 324/674 (48%), Gaps = 113/674 (16%)
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRL---FDGMPERNEVSWTAL 124
G K A I++ ++G +L N N++W + + +R D +P +
Sbjct: 353 GLVKHSPAGMIMEHIDGLELE------NVNMRWSGVIQNKRWNNPLDFLP--------ST 398
Query: 125 ISGFMKHGRVEESMWY------FER---------NPF--QNVISWTAAICGFVQNGFSFE 167
+ F VEE M + F R NPF Q ++ T F N +
Sbjct: 399 LKTFFNQLSVEEKMIWKITSLIFHRPKQVLSSISNPFSRQRILLST-----FPANSPDLK 453
Query: 168 AL----KLFLKLLESGVKPNEVTFS---SICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
L +L LLE G++ EV F S+ C R G V + K +E V
Sbjct: 454 TLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVY 513
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
+ LI L + + LG+ARR+ DEMPERN
Sbjct: 514 LRTRLIVL-------------------------------YNKCRCLGDARRVLDEMPERN 542
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MI+ Y+Q GY EA LF +M PN F+ VL++ S + G +H+
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
V+K E +F+ ++L+D+Y+K G+
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKA----------------------------------GK 628
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ EA+ +FD +P+R+ VS +AIISGY + + +F + G N T++SVL A
Sbjct: 629 ICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 688
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ +A+L+ G+ +H +++ P+ V L +L D Y+K G + SRR+FD MP++ ISW
Sbjct: 689 LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 748
Query: 521 TVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM- 578
M+ G ++ G +E++ LF+ M E+ + P+ +T L+VL CSH G+ D+GL+ F M
Sbjct: 749 NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMV 808
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+P HY CVVD+ R+GR+ EA +FI MPFEP + W SLL C+ ++N I
Sbjct: 809 NQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHI 868
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E + L ++ E+ YV+LSN+YASAGRW D VR+LM EK + K G SW+E+
Sbjct: 869 GEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQ 928
Query: 699 QVHFFFQKTDHNPK 712
+H F +P+
Sbjct: 929 TLHTFHASDRSHPR 942
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 222/489 (45%), Gaps = 128/489 (26%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L + SQ + +G+ +H H+IKT YL TRL+++Y R
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR---------------- 526
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
C L +A+R+ D MPERN VSWTA+ISG+
Sbjct: 527 -----C----------LGDARRVLDEMPERNVVSWTAMISGYS----------------- 554
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
Q G++ EAL LF+++L SG PNE TF+++ +C + F+LG +
Sbjct: 555 --------------QRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 600
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
L+ K FE H+ V +SL+ + K G++ AR VFD + +RDVVS T I
Sbjct: 601 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI---------- 650
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
I+ Y Q G EEA LFR++ R + N ++ VL+AL
Sbjct: 651 ---------------------ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 689
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ L AL G VH+HVL+ + V + N+LID+YSKCG R +FDS+ E+ V+
Sbjct: 690 SGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERT---VI 746
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWN+M+ GY +G EA ELF M + N V
Sbjct: 747 SWNAMLVGYSKHGLGREAVELFKLMKEENKVK---------------------------- 778
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKII--KLGFPYDVFLGTALTDTYAKSGDIES 504
P+ TF +VL + ++G ++ +++ K GF ++ + D + ++G +E
Sbjct: 779 --PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 836
Query: 505 SRRVFDRMP 513
+ +MP
Sbjct: 837 AFEFIKKMP 845
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 156/401 (38%), Gaps = 114/401 (28%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L TS + GR +H +IKT ++ + LL MY +
Sbjct: 584 VLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKA----------------- 626
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G + EA+R+FDG+PER+ VS TA+ISG
Sbjct: 627 --------------GKICEARRVFDGLPERDVVSCTAIISG------------------- 653
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ Q G EAL LF +L G++ N VT++S+ A + + G V
Sbjct: 654 ------------YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQV 701
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ +A +V + NSLI + K G + +R +FD M +R V+SW +L + + G
Sbjct: 702 HSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLG 761
Query: 267 GEARRIFDEMPERNEVS------------------------------------------W 284
EA +F M E N+V +
Sbjct: 762 REAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHY 821
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
++ + ++G EEAF ++M F+P + + +L A + + G V +L+
Sbjct: 822 GCVVDLFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLE 878
Query: 345 IGIEKD---VFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
I E V +SN LY+ G D R V + + EK V
Sbjct: 879 IESENAGNYVILSN----LYASAGRWDDVRTVRELMKEKAV 915
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/707 (28%), Positives = 341/707 (48%), Gaps = 105/707 (14%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL-NGFDLVVHNCMINA 96
+ GR +HG++I+ + YL T L+ MY + +EA + L N ++V N MI
Sbjct: 159 MAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGG 218
Query: 97 NIQWGNLEEAQRLFDGMPERN--------------------------------------- 117
++ G E++ L+ N
Sbjct: 219 FVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD 278
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
T+L++ + K G VE++ F++ + V A I F+ NG +++AL L+ K+
Sbjct: 279 PYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKA 338
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
+ T SS+ C+ + + G +V + K + +V++ ++L+T+ K G +
Sbjct: 339 GETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTED 398
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A SV F M ER+ V+W MIA + Q+
Sbjct: 399 ADSV-------------------------------FYTMKERDVVAWGSMIAGFCQNRRF 427
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
++A LFR M + K ++ + V+SA L+ + G +H +K G+E DVF++ +L
Sbjct: 428 KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 487
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+YSK G E A+ +F +MP +N V
Sbjct: 488 VDMYSKFGFA----------------------------------ESAEMVFSSMPNKNLV 513
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+W+++IS Y + ++ + ++L G + + ++VL A +SVA+L KGK LH
Sbjct: 514 AWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQ 573
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
I+L P D+ + AL D Y K G ++ ++ +F+ MP +N ++W M+ G G +E++
Sbjct: 574 IRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAV 633
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF+EM+++ P+E+T L+++ +CSHSG+V++GL F M Y ++P HY VVD+
Sbjct: 634 RLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDL 693
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L R+GRL +A FI MP + D + W LL C+ ++N ++ E NL K+ + Y
Sbjct: 694 LGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNY 753
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
V L N+Y W A N+R M +GL+KS GCSW+EV+N+V FF
Sbjct: 754 VPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFF 800
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 134/540 (24%), Positives = 226/540 (41%), Gaps = 103/540 (19%)
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
S + I VQ G +AL+L K S + + TF S+ K CA +++ G ++ I
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKR----DVVSWTVILDVFIEMGD 265
G + + SLI + +K G + A VFD+M E R D+ W ++D + + G
Sbjct: 82 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141
Query: 266 LGEARRIFDEMPERNEVSW-----------------------SVMIARYNQSGYPEEAFR 302
E F M E+SW + +I Y+ P EA+
Sbjct: 142 FEEGLAQFCRM---QELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWS 198
Query: 303 LF--------------------------RQMTRYSFKPNTSC------FSIVLSALASLK 330
LF + + YS N +C F+ +A + +
Sbjct: 199 LFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGE 258
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
L G VH V+K+ + D ++ +L+ +Y+K G +D + VFD +++K+V N+
Sbjct: 259 VLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR---NA 315
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
MI + NG+ +A L++ M +GE P
Sbjct: 316 MISAFIGNGRAYDALGLYNKMK--------------------------------AGETPV 343
Query: 451 KS-TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
S T SS+L + V S + G+ +H ++IK +V + +AL Y K G E + VF
Sbjct: 344 DSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVF 403
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
M +++ ++W M+ G ++ K++++LF MEK + + + SV+ A GL +
Sbjct: 404 YTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA--GLGLEN 461
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTC-VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
L + I + C +VDM S+ G AE +SMP + AW S++S
Sbjct: 462 VELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP-NKNLVAWNSMIS 520
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L ++S +++G+ LH + I+ I + + L+ MY+ A I +++ +
Sbjct: 553 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 612
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFE 142
LV N MI GN EEA RLF M +EV++ ALI+ G VEE + F+
Sbjct: 613 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQ 672
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 309/595 (51%), Gaps = 72/595 (12%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK- 181
AL++ + K G V + FER +++ SW + I G Q G +AL +F +++ G+
Sbjct: 186 ALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHH 245
Query: 182 PNEVTFSSICKACAE-INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
PNE F S+ +AC+ IN G + GL K +++ SL + + ++D A
Sbjct: 246 PNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMK 305
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VF R+E D+V SW+ +I ++ G EA
Sbjct: 306 VFYRIESPDLV-------------------------------SWNSLINAFSADGLLSEA 334
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF +M S KP+ +L A ALR G +H++++K+G+ DV + N+LI +
Sbjct: 335 MVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISM 394
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y++C L F S A ++F R+ V+W+
Sbjct: 395 YTRC-------LDFPS---------------------------AMDVFHETNDRDVVTWN 420
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIP--NKSTFSSVLCASASVASLEKGKDLHGKII 478
+I++ ++H+ + VF +F LL +P ++ + ++VL ASA + E K +H
Sbjct: 421 SILTACVQHRHMEDVFKLFR--LLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAF 478
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLAESGYAKESI 537
K+G D L AL DTYAK G ++ + ++F+ M ++ SW+ ++ G A+ GYAKE++
Sbjct: 479 KVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEAL 538
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
+LF M + PN +T + VL ACS GLVD+G Y++ MEP Y I P H +CV+D+
Sbjct: 539 DLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDL 598
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+R+GRLSEA F++ MPFEPD W +LL+ +T+ + ++ +RA + + + H A Y
Sbjct: 599 LARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAY 658
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VLL NIYAS+G W + ++K M G++KS G SW++++ ++ F + +P+
Sbjct: 659 VLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPE 713
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 215/516 (41%), Gaps = 68/516 (13%)
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
RN + LI+ + + + + F+ +N +SW A I QN +A+ LF +
Sbjct: 78 RNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSM 137
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
L G P+E S +ACAE+ D LG V K+ H+ V N+L+T+ K G V
Sbjct: 138 LRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSV 197
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
++F+R+ +D+ SW I IA Q G
Sbjct: 198 GDGFALFERIRDKDLFSWGSI-------------------------------IAGLAQQG 226
Query: 296 YPEEAFRLFRQMTRYSF-KPNTSCFSIVLSALA-SLKALRSGMHVHAHVLKIGIEKDVFI 353
+A +FR+M PN F V A + + +L G +H +K ++++ +
Sbjct: 227 REMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYA 286
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+L D+Y++C + VF I D +VSWNS+I + +G + EA
Sbjct: 287 GCSLGDMYARCNKLDSAMKVFYRIESPD---LVSWNSLINAFSADGLLSEA--------- 334
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
+F+EM S P+ T ++LCA +L +G+ +
Sbjct: 335 ----------------------MVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSI 372
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H ++KLG DV + +L Y + D S+ VF D++ ++W ++ + +
Sbjct: 373 HSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHM 432
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
++ LF + + + + +++ +VL A + G + K ++ + +
Sbjct: 433 EDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMA-KQVHAYAFKVGLVSDAILSNA 491
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++D ++ G L +A M D +W+SL+ G
Sbjct: 492 LIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVG 527
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 169/370 (45%), Gaps = 40/370 (10%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +FD M +RN VSW+ +IA + Q+ +A LF M R P+ + A A
Sbjct: 99 ARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAE 158
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L L G VHA +K + + NAL+ +YSK G DG +F+ I +KD + SW
Sbjct: 159 LGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKD---LFSW 215
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
S+I G G+ +A +F M I+ + H
Sbjct: 216 GSIIAGLAQQGREMDALHIFREM-----------IAEGMHH------------------- 245
Query: 449 PNKSTFSSVLCA-SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN+ F SV A S + SLE G+ +HG +K + + G +L D YA+ ++S+ +
Sbjct: 246 PNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMK 305
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF R+ + +SW ++ + G E++ LF EM +S+ P+ +T++++L AC
Sbjct: 306 VFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDA 365
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTC--VVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
+ +G + + + G C ++ M +R A D + + D W S
Sbjct: 366 LRQGRSIHSYL---VKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETN-DRDVVTWNS 421
Query: 626 LLSGCKTYKN 635
+L+ C +++
Sbjct: 422 ILTACVQHRH 431
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 181/415 (43%), Gaps = 72/415 (17%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
+RN + +L + + +++ +M F R +++SW + I F +G EA+ LF +
Sbjct: 281 DRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSE 340
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ S +KP+ +T ++ AC + R G S+ + K G V VCNSLI++ + +
Sbjct: 341 MRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLD 400
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
A VF RDVV+W IL + Q
Sbjct: 401 FPSAMDVFHETNDRDVVTWNSILTACV-------------------------------QH 429
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSI--VLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+ E+ F+LFR + +S P+ S+ VLSA A L VHA+ K+G+ D
Sbjct: 430 RHMEDVFKLFRLL--HSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAI 487
Query: 353 ISNALIDLYSKCGETKDGRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+SNALID Y+KCG D +F+ + +D V SW+S+I GY G +EA +LF M
Sbjct: 488 LSNALIDTYAKCGSLDDANKLFEIMGTGRD---VFSWSSLIVGYAQFGYAKEALDLFARM 544
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
RN G PN TF VL A + V +++G
Sbjct: 545 --RN-----------------------------LGVKPNHVTFVGVLIACSRVGLVDEGC 573
Query: 472 DLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ + + G + + D A++G + + + D+MP + + I W ++
Sbjct: 574 YYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLL 628
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 142/335 (42%), Gaps = 55/335 (16%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL + + QGR++H +L+K G+ + + L+ MY A ++ +
Sbjct: 352 TVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHET 411
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLF----DGMPERNEVSW----------------- 121
N D+V N ++ A +Q ++E+ +LF MP + +S
Sbjct: 412 NDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAK 471
Query: 122 ------------------TALISGFMKHGRVEESMWYFE-RNPFQNVISWTAAICGFVQN 162
ALI + K G ++++ FE ++V SW++ I G+ Q
Sbjct: 472 QVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQF 531
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV- 221
G++ EAL LF ++ GVKPN VTF + AC+ R+GL G + + E +
Sbjct: 532 GYAKEALDLFARMRNLGVKPNHVTFVGVLIACS-----RVGLVDEGCYYYSIMEPEYGIV 586
Query: 222 -----CNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFD- 274
C+ +I L + G + A D+M + D++ W +L D+ +R +
Sbjct: 587 PTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEG 646
Query: 275 --EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
+ + ++ ++ Y SG E RL + M
Sbjct: 647 VLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDM 681
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 259/443 (58%), Gaps = 9/443 (2%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLS 324
L +A ++FDEMPER+ VSW+ ++ Y ++G +EA+RLF R + +PN +S
Sbjct: 194 LDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVS 253
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A+ + L G+ +H +V + G+ + V + NAL+D++ KCG + R VFD + KDV
Sbjct: 254 AIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDV-- 311
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
SW SM+ Y G +E A++LF +MP+RN VSWS +I+ Y + Q + +F EM+
Sbjct: 312 -YSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIA 370
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKII---KLGFPYDVFLGTALTDTYAKSGD 501
+G P +T SVL A A + L+ G+ ++ I K+G V LG AL D +AK GD
Sbjct: 371 AGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGL--TVNLGNALIDMFAKCGD 428
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ + ++FD M ++N +SW M+ A G ++E+I LFE+++ +I P+++T L +L +
Sbjct: 429 VGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLAS 488
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSHSGLV +G +YF ME Y I+P HY C++D+L + G L EA + MP E D
Sbjct: 489 CSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEA 548
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LL+ C+ + N +I L +L YVL+S IYAS +W +R M
Sbjct: 549 GWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMR 608
Query: 682 EKGLRKSGGCSWVEVRNQVHFFF 704
++G++K+ GCS +EV + H F
Sbjct: 609 DRGVKKNPGCSSIEVEGKFHDFL 631
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 181/338 (53%), Gaps = 40/338 (11%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G ++V N +++ +L++A ++FD MPER+ VSWT L+ G+ + G +
Sbjct: 175 GESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLAD-------- 226
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRL 202
EA +LF ++ + G++PN VT + A ++
Sbjct: 227 -----------------------EAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAF 263
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G+ + + + G + V++ N+L+ + K G V AR VFD ME +DV SWT +++ + +
Sbjct: 264 GIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAK 323
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GDL A ++F +MP RN VSWS MIA Y+Q PEEA LFR+M P + V
Sbjct: 324 CGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSV 383
Query: 323 LSALASLKALRSGMHVHAHVL---KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
LSA A L L G ++ + + KIG+ V + NALID+++KCG+ + +FD + E
Sbjct: 384 LSACAQLGCLDLGRWIYENYIVSNKIGLT--VNLGNALIDMFAKCGDVGEASKLFDEMAE 441
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
++ VVSWN+MI + ++GQ EEA LF+ + N V
Sbjct: 442 RN---VVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIV 476
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 148/297 (49%), Gaps = 9/297 (3%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ + G + A+ +FDGM ++ SWT++++ + K G +E + F+ P +NV+
Sbjct: 284 NALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVV 343
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GL 209
SW+ I + Q EA+ LF +++ +GV P + T S+ ACA++ LG ++
Sbjct: 344 SWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENY 403
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
I V++ N+LI + K G+V A +FD M +R+VVSW ++ G EA
Sbjct: 404 IVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEA 463
Query: 270 RRIFDEMPERN----EVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLS 324
R+F+++ N ++++ ++A + SG E R F++M Y +P ++ ++
Sbjct: 464 IRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMID 523
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L + L V + +E D AL++ G + G V D +VE D
Sbjct: 524 LLGKVGLLEEAFEV---ARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELD 577
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 301/563 (53%), Gaps = 40/563 (7%)
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
F++ W A I +AL LF +LE+GV ++ + S + KAC+ + + G+
Sbjct: 83 FEDPFLWNAVIKSHSHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKACSRLGFVKEGMQ 142
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G + K G + + N LI L +I+ G
Sbjct: 143 IHGFLRKTGIWSDLYLQNCLIGL-------------------------------YIKCGC 171
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
LG AR++FD MP R+ VS++ MI Y + G E A LF M + K N ++ ++S
Sbjct: 172 LGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKE--KKNLISWNFMISG 229
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A G++V + EKD+ N+LID Y K G +D + +F+ + ++DV
Sbjct: 230 YAQRA---DGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDV--- 283
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V+W +M+ GY G + +AK LFD MP R+ V+++++I+GY++++ +FN+M
Sbjct: 284 VTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKE 343
Query: 446 GEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ P+++T VL A A + L K D+H I+ F LG AL DTY+K G I+
Sbjct: 344 SHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQK 403
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
S RVF+ + +K+ W M+ GLA G + + ++ ++EK SI P+++T + VL ACSH
Sbjct: 404 SMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSH 463
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLV +GL F M + I+P +HY C+VD+LSRSG + A++ I MP EP+ W
Sbjct: 464 SGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWR 523
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+ L+ C +K + E K+L+ +P+ +VLLSN+YAS G W + VR M E+
Sbjct: 524 TFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTMKERK 583
Query: 685 LRKSGGCSWVEVRNQVHFFFQKT 707
LRK GCSW+E+ VH FF T
Sbjct: 584 LRKIPGCSWIELDGNVHEFFVDT 606
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 207/495 (41%), Gaps = 94/495 (18%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF + ET + + +LK + V +G +HG L KTGI + YL L+ +Y+
Sbjct: 108 LFCLMLETGVSVDKFSLSLVLKACSRLGFVKEGMQIHGFLRKTGIWSDLYLQNCLIGLYI 167
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEE---------------------- 105
A ++ + D V +N MI+ ++ G +E
Sbjct: 168 KCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEKKNLISWNFMI 227
Query: 106 ------------AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWT 153
A++LFD MPE++ +SW +LI G++KHGR+E++ F + P ++V++W
Sbjct: 228 SGYAQRADGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWA 287
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
+ G+ + GF +A LF ++ V V ++S+ + + + +F + K
Sbjct: 288 TMVDGYAKLGFVHQAKSLFDRMPLRDV----VAYNSMITGYVQNRYHKEAIGIFNDMEK- 342
Query: 214 GFEKHVS--------VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
E H+S V +++ L VD+ + D + ++D + + G
Sbjct: 343 --ESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGS 400
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ ++ R+F+E+ ++ W+ MI G E AF + Q+ + S KP+ F VL+A
Sbjct: 401 IQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNA 460
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEK 380
S G K+G L F+ + +E
Sbjct: 461 C-----------------------------------SHSGLVKEGLLCFELMRRKHKIEP 485
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ H + M+ +G +E AK L + MP + NDV W ++ HK+F+ V
Sbjct: 486 KLQH---YGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELVA 542
Query: 440 NEMLLSGEIPNKSTF 454
+ L G N S+F
Sbjct: 543 KHLFLQGGY-NPSSF 556
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 263/460 (57%), Gaps = 6/460 (1%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+L+ + + G + +A ++FD +P R+ V+W+ ++ N S P A + R + F P
Sbjct: 43 TLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHP 102
Query: 315 NTSCFSIVLSALASLKAL--RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+ F+ ++ A A+L L + G VHA D + ++LID+Y+K G GR
Sbjct: 103 DHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRA 162
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
VFDSI + +SW +MI GY +G+ EA LF P RN +W+A+ISG ++
Sbjct: 163 VFDSISSLNS---ISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNG 219
Query: 433 DLVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
F +F EM G + + SSV+ A A++A E GK +HG +I LG+ +F+ A
Sbjct: 220 VDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNA 279
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D YAK D+ +++ +F M K+ +SWT ++ G A+ G A+E++ L++EM + PN
Sbjct: 280 LIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPN 339
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
E+T + ++ ACSH+GLV KG F +M + I P+ +HYTC++D+ SRSG L EAE+ I
Sbjct: 340 EVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLI 399
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
+MP PD WA+LLS CK + N Q+A R +L L E P+ Y+LLSNIYA AG W
Sbjct: 400 RTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWE 459
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
D VRKLM +K+ G S +++ H F+ +P
Sbjct: 460 DVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHP 499
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 219/463 (47%), Gaps = 41/463 (8%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
AQ + G+ + + T L++ + K G +++++ F+ P ++ ++W + + +
Sbjct: 26 HAQIIKAGLNQHEPIPNT-LLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNR 84
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEIN--DFRLGLSVFGLIFKAGFEKHVSVC 222
AL + LL +G P+ F+S+ KACA + + G V F + F V
Sbjct: 85 PHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVK 144
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
+SLI + K G D R+VFD + + +SWT ++ + G EA R+F + P RN
Sbjct: 145 SSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLF 204
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAH 341
+W+ +I+ QSG +AF LF +M + S V+ A A+L G +H
Sbjct: 205 AWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGV 264
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
V+ +G E +FISNALID+Y+KC + + +F + KD VVSW S+I G +GQ
Sbjct: 265 VITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKD---VVSWTSIIVGTAQHGQA 321
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EEA A+++EM+L+G PN+ TF ++ A
Sbjct: 322 EEA-------------------------------LALYDEMVLAGVKPNEVTFVGLIHAC 350
Query: 462 ASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEIS 519
+ + KG+ L +++ G + T L D +++SG ++ + + MP + +E +
Sbjct: 351 SHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPT 410
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSI-TPNELTILSVLFA 561
W ++ G + ++ + + + P+ +LS ++A
Sbjct: 411 WAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYA 453
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 194/401 (48%), Gaps = 24/401 (5%)
Query: 47 LIKTGIHKERYLTTRLL-------IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
L+ TG H + ++ L+ ++++ K + A + + D VV + +I+ +
Sbjct: 95 LLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDD-VVKSSLIDMYAK 153
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+G + + +FD + N +SWT +ISG+ + GR E+ F + P++N+ +WTA I G
Sbjct: 154 FGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGL 213
Query: 160 VQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
VQ+G +A LF+++ G+ + + SS+ ACA + + LG + G++ G+E
Sbjct: 214 VQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESC 273
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM-- 276
+ + N+LI + K ++ A+ +F M ++DVVSWT I+ + G EA ++DEM
Sbjct: 274 LFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVL 333
Query: 277 --PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALR 333
+ NEV++ +I + +G + LFR M + P+ ++ +L + R
Sbjct: 334 AGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFS-----R 388
Query: 334 SGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV---EKDVAHVVSW 388
SG A L + + D AL+ + G T+ + D ++ +D + +
Sbjct: 389 SGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILL 448
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+++ G G+ + + ++L + + +S I G H
Sbjct: 449 SNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSH 489
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 36/207 (17%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA ++K G+ + I N L++ Y KCG +D +FD+
Sbjct: 25 LHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDA--------------------- 63
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+P+R+ V+W+++++ + ++ +L +G P+ F+S+
Sbjct: 64 -------------LPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASL 110
Query: 458 L--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
+ CA+ V +++GK +H + F D + ++L D YAK G + R VFD +
Sbjct: 111 VKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSL 170
Query: 516 NEISWTVMVRGLAESGYAKESINLFEE 542
N ISWT M+ G A SG E+ LF +
Sbjct: 171 NSISWTTMISGYARSGRKFEAFRLFRQ 197
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 44/214 (20%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+ S LC++A + L K LH +IIK G + L + Y K G I+ + ++FD +
Sbjct: 6 SLQSQLCSAARQSPL-LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDAL 64
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS--------- 563
P ++ ++W ++ S ++++ + T P+ S++ AC+
Sbjct: 65 PRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQ 124
Query: 564 ----HS------------------------GLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
H+ GL D G F+S+ + +I +T ++
Sbjct: 125 GKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSIS-----WTTMI 179
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+RSGR EA P+ + AW +L+SG
Sbjct: 180 SGYARSGRKFEAFRLFRQTPYR-NLFAWTALISG 212
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 26/258 (10%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG +I G +++ L+ MY + A I ++ D+V +I Q
Sbjct: 258 GKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQ 317
Query: 100 WGNLEEAQRLFDGM----PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS---- 151
G EEA L+D M + NEV++ LI G V + F + IS
Sbjct: 318 HGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQ 377
Query: 152 -WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+T + F ++G EA L + V P+E T++++ +C + ++ + + +
Sbjct: 378 HYTCLLDLFSRSGHLDEAENLIRTM---PVNPDEPTWAALLSSCKRHGNTQMAVRIADHL 434
Query: 211 FKAGFEKHVS-VCNSLITLSLKMGE-VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
E S + S I M E V R + +E + ++ I DLG+
Sbjct: 435 LNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCI--------DLGK 486
Query: 269 ARRIF----DEMPERNEV 282
+F P R+E+
Sbjct: 487 GSHVFYAGETSHPMRDEI 504
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 309/594 (52%), Gaps = 42/594 (7%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE-ALKLFLKLLESGVKP 182
LIS ++ G + F +N + W + + F + S L++F +L GV
Sbjct: 462 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 521
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +S K C + D LG+ + G + K GF DL
Sbjct: 522 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGF--------------------DL----- 556
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
DV +++ + L +A ++F EMP + W+ I QS ++
Sbjct: 557 ------DVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVE 610
Query: 303 LFRQMTRYSFKPNTSCFSIVLSA-LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LFR+M K T+ VL A ++ L L G H +VL+ G + DV++ +LID+Y
Sbjct: 611 LFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMY 670
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDV 417
K + VFD++ +++ +WNS++ GY G E+A L + M K + V
Sbjct: 671 VKNHSLTSAQAVFDNMKNRNI---FAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLV 727
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+W+ +ISGY A F +M G +PN ++ + +L A AS++ L+KGK++H
Sbjct: 728 TWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLS 787
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
I+ GF DVF+ TAL D Y+KS ++++ +VF R+ +K SW M+ G A G KE+I
Sbjct: 788 IRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAI 847
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
++F EM+K + P+ +T ++L AC +SGL+ +G KYF+SM Y I P HY C+VD+
Sbjct: 848 SVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDL 907
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L R+G L EA D I++MP +PD+ W +LL C+ +KN + AE A KNL+KL + A Y
Sbjct: 908 LGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANY 967
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+L+ N+Y+ RW D ++R+LM G+R SW+++ +VH F +D P
Sbjct: 968 ILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVF--SSDEKP 1019
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 162/312 (51%), Gaps = 12/312 (3%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL++ + + +E++ F P + W AI +Q+ + ++LF K+ S +K
Sbjct: 563 ALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKA 622
Query: 183 NEVTFSSICKAC-AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
T + +A +E+ +G G + + GF+ V V SLI + +K + A++V
Sbjct: 623 ETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAV 682
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYP 297
FD M+ R++ +W ++ + G +A R+ ++M + + V+W+ MI+ Y G
Sbjct: 683 FDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCG 742
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+EA F QM + PN++ + +L A ASL L+ G +H ++ G +DVF++ AL
Sbjct: 743 KEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATAL 802
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK---- 413
ID+YSK K+ VF I K +A SWN MI G+ + G +EA +F+ M K
Sbjct: 803 IDMYSKSSSLKNAHKVFRRIQNKTLA---SWNCMIMGFAIFGLGKEAISVFNEMQKVGVG 859
Query: 414 RNDVSWSAIISG 425
+ ++++A++S
Sbjct: 860 PDAITFTALLSA 871
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 185/435 (42%), Gaps = 48/435 (11%)
Query: 83 NGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
NGFD + V +I+ ++ +L AQ +FD M RN +W +L+SG+ G E+++
Sbjct: 654 NGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRL 713
Query: 141 FERNPFQNV----ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ + + ++W I G+ G EAL F ++ + GV PN + + + +ACA
Sbjct: 714 LNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACAS 773
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
++ + G + L + GF + V V +LI + K + A VF R++ + + SW +
Sbjct: 774 LSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCM 833
Query: 257 LDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYS 311
+ F G EA +F+EM + + ++++ +++ SG E ++ F M T Y
Sbjct: 834 IMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYR 893
Query: 312 FKPNTSCFSIVLSALASLKALRSGMH-VHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P + ++ L L +H LK D I AL+ C K+
Sbjct: 894 IVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK----PDATIWGALL---GSCRIHKN- 945
Query: 371 RLVFDSIVEKDVAHVVSWNS-----MIGGYGLNGQ---MEEAKELFDNMPKRNDVSWSAI 422
L F K++ + NS M+ Y + + M+ +EL RN WS I
Sbjct: 946 -LKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWI 1004
Query: 423 ISGYLEH-------------KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
H K + ++ + +EM G +P+ V C ++ +EK
Sbjct: 1005 QINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPD------VNCVYQNMDEVEK 1058
Query: 470 GKDLHGKIIKLGFPY 484
K L KL Y
Sbjct: 1059 QKILLSHTEKLAITY 1073
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 180/459 (39%), Gaps = 88/459 (19%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
LK T + G +HG LIK G + YL L+ Y +AN++ ++ +
Sbjct: 530 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEA 589
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS----------GFMKHGRVEES 137
++ N I N+Q L++ LF M + TA I GF+ G+ E+
Sbjct: 590 LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGK--ET 647
Query: 138 MWYFERNPF--------------------------------QNVISWTAAICGFVQNGFS 165
Y RN F +N+ +W + + G+ G
Sbjct: 648 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 707
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
+AL+L ++ + G+KP+ VT++ + A + L+ F + + G + + L
Sbjct: 708 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCL 767
Query: 226 ITLSLKMGEVDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
+ + + + + + DV T ++D++ + L A ++F + +
Sbjct: 768 LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 827
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
SW+ MI + G +EA +F +M + P+ F+ +LSA + SG+
Sbjct: 828 ASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN-----SGL----- 877
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE--KDVAHVVSWNSMIGGYGLNG 399
IG +G FDS++ + V + + M+ G G
Sbjct: 878 ---IG----------------------EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAG 912
Query: 400 QMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDLVFA 437
++EA +L MP + D + W A++ HK +L FA
Sbjct: 913 YLDEAWDLIHTMPLKPDATIWGALLGSCRIHK--NLKFA 949
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 188/635 (29%), Positives = 325/635 (51%), Gaps = 79/635 (12%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
KS + + + ++++ N ++N L+EA+ +FD +P + +T +ISG+ +
Sbjct: 24 KSFRSYSVTVEFQNREVLICNHLLNRR-----LDEAREVFDQVPSPHVSLYTKMISGYTR 78
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
R+ +++ F+ P ++V+SW + I G V+ G A+K+F ++ E V V+++++
Sbjct: 79 SNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSV----VSWTAM 134
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
C FR G+ VD A +F +M +D+
Sbjct: 135 VNGC-----FRFGM------------------------------VDQAERLFCQMPVKDI 159
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+W ++ +++ G + +A ++F +MP +N +SW+ MI +Q+ EA LF+ M R
Sbjct: 160 AAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRC 219
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
K + F+ V++A A+ A G VH ++K G + +++ +LI LY+ C T+D
Sbjct: 220 CIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDS 279
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
R ++F M W+A++SGY ++
Sbjct: 280 R----------------------------------KVFGEMVHEKVAVWTALLSGYSLNR 305
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+ + VF+EM+ + +PN+STF+S L + +++ +L+ GK++HG +KLG F+G
Sbjct: 306 KHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGN 365
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
+L Y+ SG++ + VF + K+ +SW ++ G A+ G K + +F +M + + P
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYN-IKPNGRHYTCVVDMLSRSGRLSEAED 609
+E+T +L ACSH G + KG K F + N I +HYTC+VD+L R G L EAE
Sbjct: 426 DEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEK 485
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
I SM +P+ W +LLS C+ + + E+A ++ L + A YVLLSNIYASAGR
Sbjct: 486 LIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGR 545
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
W +R M +KG+ K G SWV +R + H FF
Sbjct: 546 WSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFF 580
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 147/376 (39%), Gaps = 95/376 (25%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
+LF S T C++ + G +HG +IK+G E Y+T L+ +Y
Sbjct: 211 NLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLY 270
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
+++ E+++++F M WTAL+S
Sbjct: 271 ANCKRT-------------------------------EDSRKVFGEMVHEKVAVWTALLS 299
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVT 186
G+ + + E +AL +F +++ + + PN+ T
Sbjct: 300 GYSLNRKHE-------------------------------DALNVFSEMIRNSILPNQST 328
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F+S +C+ + G + G+ K G V NSL+ + G V+ A SVF +
Sbjct: 329 FASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIF 388
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
K+ +VSW I+ +G A Q G + AF +F Q
Sbjct: 389 KKSIVSWNSII--------VGCA-----------------------QHGRGKWAFVIFGQ 417
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKC 364
M R + +P+ F+ +LSA + L+ G + ++ I++ + ++D+ +C
Sbjct: 418 MIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRC 477
Query: 365 GETKDGRLVFDSIVEK 380
GE K+ + +S+V K
Sbjct: 478 GELKEAEKLIESMVVK 493
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 301/577 (52%), Gaps = 44/577 (7%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSF-----EALKLFLKLLESG--VKPNEVTFSSICKACA 195
R+ F V T A+CG + + S E L F L G V P V + K+CA
Sbjct: 39 RHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPL--VVKSCA 96
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ R G V G + V +L+ K G++D A VFD M +D +
Sbjct: 97 ILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNC 156
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ + + GD+ +ARR+FD M R SW+ MIA Y G +EA RLFR+M +PN
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+I ++ + S+ A K G+ + G+
Sbjct: 217 ----AITIATMFSICA-------------------------------KTGDLETGKWARS 241
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
I E+D+ +++ +++ Y ++EA+ FD M +R+ V+WS +I+GY ++ +
Sbjct: 242 LIAEQDLQNMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHES 301
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F M + PN+ T VL A A + S E G + + P +LG+AL D
Sbjct: 302 LELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDM 361
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G + +R VF+RM K I+W M+RGLA +G+A+++I L++EM + + PNE+T
Sbjct: 362 YTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITF 421
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+++L AC+H+GLVD+G+ +F M+ I+++ P H C+VD+L +SGRL EA FI M
Sbjct: 422 VALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDME 481
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
EP++ W++LLS C+ + + ++A+ A L L ++ + YVLLSNIYA AG W D
Sbjct: 482 VEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVRE 541
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R LM K ++K SW+E+ +VH F + ++PK
Sbjct: 542 IRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPK 578
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 178/361 (49%), Gaps = 6/361 (1%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +FD +P +I+ ++ +E F + R C +V+ + A
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAI 97
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L A R G VH H + G+ D+F+ AL+D Y+K G+ VFD + KD +
Sbjct: 98 LAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKD---PIPM 154
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N +I GY +G + +A+ LFD M +R SW+++I+ Y ++ +F ML G
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGAR 214
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN T +++ A LE GK I + ++ + TAL + Y K I+ +RR
Sbjct: 215 PNAITIATMFSICAKTGDLETGKWARSLIAEQDL-QNMIVHTALMEMYVKCQAIDEARRE 273
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FDRM ++ ++W+ M+ G A++G ES+ LFE M+ TS PNE+T++ VL AC+ G
Sbjct: 274 FDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSD 333
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ G + + +E N+ + ++DM ++ G + A N M + W S++
Sbjct: 334 ELGGQIGSHVES-QNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV-VITWNSMMR 391
Query: 629 G 629
G
Sbjct: 392 G 392
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 224/483 (46%), Gaps = 74/483 (15%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K + + IV+ L G D+ V +++ + G+++ A ++FD MP ++ + LI+G+ K
Sbjct: 105 KQVHCHAIVRGLLG-DIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSK 163
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G V ++ F+ + SW + I + G EAL+LF ++L G +PN +T +++
Sbjct: 164 SGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATM 223
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
CA+ D G ARS+ + +++
Sbjct: 224 FSICAKTGDLETG--------------------------------KWARSLIAEQDLQNM 251
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+ T +++++++ + EARR FD M +R+ V+WS MIA Y Q+G P E+ LF +M
Sbjct: 252 IVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKAT 311
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
S KPN VLSA A L + G + +HV + ++ +ALID+Y+KCG
Sbjct: 312 SCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRA 371
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGY 426
R VF+ + K V++WNSM+ G LNG ++A L+ M + N++++ A+++
Sbjct: 372 RSVFNRMEHKV---VITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTAC 428
Query: 427 LEHKQFDLVFAVFNEM------------------LL--SGEI-------------PNKST 453
D + F EM LL SG + PN
Sbjct: 429 THAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVI 488
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+S++L A + A +E K K++ L P + + L++ YA +G R + D M
Sbjct: 489 WSTLLSACRAHADVELAKLAASKLLVLE-PDNSSIYVLLSNIYADAGLWGDVREIRDLMR 547
Query: 514 DKN 516
KN
Sbjct: 548 SKN 550
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 264/458 (57%), Gaps = 39/458 (8%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
V+++++++ L +A ++FD+MP+RN +SW+ MI+ Y++ ++A L M R +P
Sbjct: 53 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRP 112
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N +S VL A + +R +H ++K G+E DV++ +ALID+++K GE +D
Sbjct: 113 NVYTYSSVLRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPED----- 164
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
A +FD M + + W++II G+ ++ + D+
Sbjct: 165 -----------------------------ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 195
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F M +G I ++T +SVL A +A LE G H I+K + D+ L AL D
Sbjct: 196 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVD 253
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K G +E +RRVF++M +++ I+W+ M+ GLA++GY++E++ LFE M+ + PN +T
Sbjct: 254 MYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYIT 313
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
I+ VLFACSH+GL++ G YF SM+ +Y I P HY C++D+L ++G+L +A +N M
Sbjct: 314 IVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEM 373
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
EPD+ W +LL C+ +N +AE A K + L E Y +LSNIYA++ +W
Sbjct: 374 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVE 433
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+RK M + G++K GCSW+EV Q+H F + +P+
Sbjct: 434 EIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQ 471
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 79/394 (20%)
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG-MPERNEVSWTALISGFMK 130
SL+++ + D + ++ C+ + + GNL F+G P V+ LI+ ++K
Sbjct: 3 SLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVN--VLINMYVK 60
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+ ++ F++ P +NVISWT I + + +AL+L + +L GV+PN T+SS+
Sbjct: 61 FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSV 120
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE---------------- 234
+AC ++D R+ + I K G E V V ++LI + K+GE
Sbjct: 121 LRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDA 177
Query: 235 ---------------VDLARSVFDRMEK-------------------------------- 247
D+A +F RM++
Sbjct: 178 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 237
Query: 248 -----RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+D++ ++D++ + G L +ARR+F++M ER+ ++WS MI+ Q+GY +EA +
Sbjct: 238 IVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALK 297
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLY 361
LF M KPN VL A + L G + + K+ GI +IDL
Sbjct: 298 LFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLL 357
Query: 362 SKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGG 394
K G+ D +L+ + E D V+W +++G
Sbjct: 358 GKAGKLDDAVKLLNEMECEPD---AVTWRTLLGA 388
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ +T+S ++ S ++ +G + + G +FL L + Y K + + ++F
Sbjct: 12 DSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLF 71
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS------ 563
D+MP +N ISWT M+ ++ ++++ L M + + PN T SVL AC+
Sbjct: 72 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVR 131
Query: 564 --HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
H G++ +GL+ +Y + ++D+ ++ G +A + M D+
Sbjct: 132 MLHCGIIKEGLE-----SDVYV-------RSALIDVFAKLGEPEDALSVFDEM-VTGDAI 178
Query: 622 AWASLLSG 629
W S++ G
Sbjct: 179 VWNSIIGG 186
>gi|108712115|gb|ABF99910.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215767226|dbj|BAG99454.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 684
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 200/685 (29%), Positives = 355/685 (51%), Gaps = 18/685 (2%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYL--TTRLLIMY--LGSRKSLEAN 76
+ C+ LL+ ++ + G+ LH L+K+G H L + LL+MY +A
Sbjct: 7 VRNCIQLLRSCSA----VAGQQLHQLLLKSG-HVPSSLPPSNSLLLMYARCSPLHQHDAR 61
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
+ ++ + +N +I +++ + A +F MPERN SW +I+G + G ++
Sbjct: 62 RLFDEMPVKNCFSYNSVITSHLNSRDHHAALNIFRSMPERNTFSWNTIITGIVSTGNLDM 121
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKP-----NEVTFSSI 190
+ P ++ ++ A + +V+ G + EA L + + SG + ++I
Sbjct: 122 ARSLLIEMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATI 181
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
ACA+ + G + + E+ + + +L+ + K G++D AR V + + + D
Sbjct: 182 VGACADWMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKCGDLDSARYVLNGLTQVDE 241
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
S + ++ + G L EA R+FD E + W+ +I+ + +AF LF +M R
Sbjct: 242 FSLSALIYGYASCGHLHEAIRLFDRKEEPSIAMWNSLISGCAFACCGNDAFALFARMMRS 301
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P++S ++ +L+ + G +H LK G D+ +++ALID YSKCG +D
Sbjct: 302 DVLPDSSTYASILNVCGFSVMVNPGQQIHGCGLKCGAVNDIIVASALIDFYSKCGLWEDA 361
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
F + D + NSMI Y GQ+EEA+ +FD + ++ +SW++++ G ++
Sbjct: 362 CRAFRELRFHDT---IVLNSMITVYSNCGQIEEARRIFDMITGKSVISWNSMVVGLSQNG 418
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+F EM G +K +S L AS+S+ S+ G+ + LG D + +
Sbjct: 419 HARDALGLFCEMHRLGLRLDKVAIASALSASSSICSISFGEQIFSLATVLGLQSDHVVAS 478
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
+L D Y K G + + R+F+ + +E+ W M+ G A +GY E++ L E M+ I P
Sbjct: 479 SLIDLYCKCGSLANGCRIFEEIDKPDEVLWNSMLIGHASNGYGHEALELLELMKTKGIKP 538
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+E T ++VL AC HSGLV +GL +F+ M+ +++ P+ HY CV D+L R+GRL E+ +F
Sbjct: 539 SERTFIAVLSACCHSGLVKEGLTWFHRMQADFSVSPSAEHYACVTDLLVRAGRLEESVEF 598
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
I +MPFE D+ +W +++ GCK NE + + K L ++ HP+ YV LS+ AS G W
Sbjct: 599 IENMPFEADAVSWTTVIGGCKAQGNEAMMRKVAKKLMEMESSHPSLYVQLSSGLASLGDW 658
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVE 695
+ +R +M E+ + K+ G SW++
Sbjct: 659 TKSAEIRSMMYERRITKNPGYSWID 683
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 301/577 (52%), Gaps = 44/577 (7%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSF-----EALKLFLKLLESG--VKPNEVTFSSICKACA 195
R+ F V T A+CG + + S E L F L G V P V + K+CA
Sbjct: 39 RHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPL--VVKSCA 96
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ R G V G + V +L+ K G++D A VFD M +D +
Sbjct: 97 ILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNC 156
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ + + GD+ +ARR+FD M R SW+ MIA Y G +EA RLFR+M +PN
Sbjct: 157 LITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPN 216
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+I ++ + S+ A K G+ + G+
Sbjct: 217 ----AITIATMFSICA-------------------------------KTGDLETGKWARS 241
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
I E+D+ +++ +++ Y ++EA+ FD M +R+ V+WS +I+GY ++ +
Sbjct: 242 LIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHES 301
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F M + PN+ T VL A A + S E G + + P +LG+AL D
Sbjct: 302 LELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDM 361
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G + +R VF+RM K I+W M+RGLA +G+A+++I L++EM + + PNE+T
Sbjct: 362 YTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITF 421
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+++L AC+H+GLVD+G+ +F M+ I+++ P H C+VD+L +SGRL EA FI M
Sbjct: 422 VALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDME 481
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
EP++ W++LLS C+ + + ++A+ A L L ++ + YVLLSNIYA AG W D
Sbjct: 482 VEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVRE 541
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R LM K ++K SW+E+ +VH F + ++PK
Sbjct: 542 IRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPK 578
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 178/361 (49%), Gaps = 6/361 (1%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +FD +P +I+ ++ +E F + R C +V+ + A
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAI 97
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L A R G VH H + G+ D+F+ AL+D Y+K G+ VFD + KD +
Sbjct: 98 LAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKD---PIPM 154
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N +I GY +G + +A+ LFD M +R SW+++I+ Y ++ +F ML G
Sbjct: 155 NCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGAR 214
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN T +++ A LE GK I + ++ + TAL + Y K I+ +RR
Sbjct: 215 PNAITIATMFSICAKTGDLETGKWARSLIAEQDL-QNMIVHTALMEMYVKCRAIDEARRE 273
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FDRM ++ ++W+ M+ G A++G ES+ LFE M+ TS PNE+T++ VL AC+ G
Sbjct: 274 FDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSD 333
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ G + + +E N+ + ++DM ++ G + A N M + W S++
Sbjct: 334 ELGGQIGSHVES-QNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV-VITWNSMMR 391
Query: 629 G 629
G
Sbjct: 392 G 392
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 224/483 (46%), Gaps = 74/483 (15%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K + + IV+ L G D+ V +++ + G+++ A ++FD MP ++ + LI+G+ K
Sbjct: 105 KQVHCHAIVRGLLG-DIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSK 163
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G V ++ F+ + SW + I + G EAL+LF ++L G +PN +T +++
Sbjct: 164 SGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATM 223
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
CA+ D G ARS+ + +++
Sbjct: 224 FSICAKTGDLETG--------------------------------KWARSLIAEQDLQNM 251
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+ T +++++++ + EARR FD M +R+ V+WS MIA Y Q+G P E+ LF +M
Sbjct: 252 IVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKAT 311
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
S KPN VLSA A L + G + +HV + ++ +ALID+Y+KCG
Sbjct: 312 SCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRA 371
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGY 426
R VF+ + K V++WNSM+ G LNG ++A L+ M + N++++ A+++
Sbjct: 372 RSVFNRMEHKV---VITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTAC 428
Query: 427 LEHKQFDLVFAVFNEM------------------LL--SGEI-------------PNKST 453
D + F EM LL SG + PN
Sbjct: 429 THAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVI 488
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+S++L A + A +E K K++ L P + + L++ YA +G R + D M
Sbjct: 489 WSTLLSACRAHADVELAKLAASKLLVLE-PDNSSIYVLLSNIYADAGLWGDVREIRDLMR 547
Query: 514 DKN 516
KN
Sbjct: 548 SKN 550
>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 682
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 304/576 (52%), Gaps = 39/576 (6%)
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
E + + + W I + +N E + + +++ G++P+ T+ S+ KAC E D
Sbjct: 103 ENSDILHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVA 162
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V G I + ++ + VCN+LI++ + G V +AR +FD M +RD VSW +++ +
Sbjct: 163 SGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYA 222
Query: 262 EMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+G EA +FD+M E + ++W+++ Y +G A L +M + +
Sbjct: 223 SVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPV 282
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
I L A + + A+R G +H + + + N LI +YSKC + ++ +VF
Sbjct: 283 AMIIGLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKT 342
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
E + +WNS+I GY + EEA L
Sbjct: 343 EENSLC---TWNSIISGYAQVNKSEEASYL------------------------------ 369
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTY 496
EMLL+G PN T +S+L A +A+L+ GK+ H I++ F L +L D Y
Sbjct: 370 -LREMLLAGFQPNFITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVY 428
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
AKSG I ++++V + M + +E+++T ++ G G + ++ LF+EM ++ I P+ +T++
Sbjct: 429 AKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQGEGRVALALFDEMIRSGIKPDPVTMV 488
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
+VL ACSHS LV +G + F M+P Y I+P +H++C+VD+ R+G L++A+D I+ MP+
Sbjct: 489 AVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHRMPY 548
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
EP WA+LL+ C + N +I + A + L ++ E+P YVL++N+YA+AG W V
Sbjct: 549 EPSGATWATLLNACHIHGNTEIGKWAAEKLLEMKPENPGYYVLIANMYATAGSWSKLAEV 608
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
R +M + G+RK GC+W+ + F NP+
Sbjct: 609 RTIMRDLGVRKDPGCAWINTDSGFSLFSVGDTSNPQ 644
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 192/445 (43%), Gaps = 72/445 (16%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V N +I+ ++GN+ A+RLFD M ER+ VSW A+I+ + G E+ F++ F
Sbjct: 180 LYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWSEAFELFDKMRF 239
Query: 147 Q----NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+VI+W G++ G AL L ++ + V KAC+ I RL
Sbjct: 240 SGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL 299
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + GL ++ +V N+LIT+ K ++ A VF + E+ + +W I
Sbjct: 300 GKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNSI------ 353
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
I+ Y Q EEA L R+M F+PN + +
Sbjct: 354 -------------------------ISGYAQVNKSEEASYLLREMLLAGFQPNFITLASI 388
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKD-VFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L A + L+ G H ++L+ KD + N+L+D+Y+K G+ + V + + E D
Sbjct: 389 LPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEID 448
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V++ S+I GYG G+ A LFD E
Sbjct: 449 ---EVTYTSLIDGYGNQGEGRVALALFD-------------------------------E 474
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSG 500
M+ SG P+ T +VL A + + +G+ L K+ K G + + + D Y ++G
Sbjct: 475 MIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGRAG 534
Query: 501 DIESSRRVFDRMP-DKNEISWTVMV 524
+ ++ + RMP + + +W ++
Sbjct: 535 FLAKAKDIIHRMPYEPSGATWATLL 559
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 201/482 (41%), Gaps = 47/482 (9%)
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVT-------FSSICKACAEINDFRLGLSVFGLIF 211
+G +A K F LL P+ V+ +S+ AC ++ F GL +
Sbjct: 13 LASHGHLHDAFKTF-SLLRLQSSPSAVSGDVVLHSAASLLSACVDVLAFVPGLQIHAHCV 71
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+G E H ++ L+T S F+ + E + E
Sbjct: 72 SSGVEYHSALVPKLVTF----------YSAFN---------------LHREAQSINENSD 106
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
I +P W+V+IA Y ++ EE +++M +P+ + VL A
Sbjct: 107 ILHPLP------WNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLD 160
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
+ SG VH + + +++ NALI +Y + G R +FD + E+D VSWN++
Sbjct: 161 VASGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERD---AVSWNAV 217
Query: 392 IGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
I Y G EA ELFD M + + ++W+ I GYL + + + M
Sbjct: 218 INCYASVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPT 277
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
+ L A + + ++ GK++HG I + + L Y+K D+ ++
Sbjct: 278 SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFI 337
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
VF + + + +W ++ G A+ ++E+ L EM PN +T+ S+L C+
Sbjct: 338 VFQKTEENSLCTWNSIISGYAQVNKSEEASYLLREMLLAGFQPNFITLASILPLCARIAN 397
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ G ++ + K + +VD+ ++SG++ A+ N M E D + SL+
Sbjct: 398 LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMS-EIDEVTYTSLI 456
Query: 628 SG 629
G
Sbjct: 457 DG 458
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 276/491 (56%), Gaps = 30/491 (6%)
Query: 250 VVSWTVILDVFIEMGD-LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
+VS ++L + + D L ARR+F ++ + ++ +I + S P A +LF +M
Sbjct: 38 LVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMR 97
Query: 309 RYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
R S P++ F+ +L A A+ +AL +G+ +H + G++ +F+ LI +Y++C
Sbjct: 98 RKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACL 157
Query: 368 KDGRLVFDSIVEKDVA----------------------------HVVSWNSMIGGYGLNG 399
R VFD ++E ++ ++ SWN M+ GY G
Sbjct: 158 VFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAG 217
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+++ A+E+F MP ++DVSWS +I G+ + F+ FA F E+ G PN+ + + VL
Sbjct: 218 ELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLS 277
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A A + E G+ LHG + K GF + + AL DTY+K G+++ +R VFD M ++ +S
Sbjct: 278 ACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVS 337
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
WT M+ G+A GY +E+I LF EME+++I P+ +T +S+L+ACSH+GLVD G YF+ M
Sbjct: 338 WTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMV 397
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y I+P HY C+VD+ R+G+L +A DF+ MP P+ W +LL C + N +A
Sbjct: 398 NTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLA 457
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
+ + L +L E+ +VLLSNIYA AG+W D +R+ MT + L+K+ G S +EV
Sbjct: 458 GQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRI 517
Query: 700 VHFFFQKTDHN 710
++ F N
Sbjct: 518 IYSFVAGEKQN 528
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 183/383 (47%), Gaps = 36/383 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK + + G LH + G+ ++ T L+ MY + A ++ ++ +
Sbjct: 112 LLKAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPN 171
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V N ++ A + +++A+++F MP RN SW +++G+ K G ++ + F + P
Sbjct: 172 IVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPL 231
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++ +SW+ I GF NG +A F ++ G++PNEV+ + + ACA+ F G +
Sbjct: 232 KDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRIL 291
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + K+GF + +SV N+LI K G +D+AR VFD M +R VSWT ++ G
Sbjct: 292 HGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYG 351
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EA R+F+EM E N KP++ F +L A
Sbjct: 352 EEAIRLFNEMEESN-------------------------------IKPDSITFISILYAC 380
Query: 327 ASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA-H 384
+ + G + ++ GIE + ++DLY + G+ + +D + + ++ +
Sbjct: 381 SHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQA---YDFVCQMPISPN 437
Query: 385 VVSWNSMIGGYGLNGQMEEAKEL 407
+ W +++G ++G + A ++
Sbjct: 438 DIVWRTLLGACSIHGNLYLAGQV 460
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 185/423 (43%), Gaps = 70/423 (16%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFR 201
RNP +V + I G + AL+LF+++ V P+ +F+ + KA A
Sbjct: 66 RNP--DVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALT 123
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-------------- 247
GL + L G + H+ V +LI++ + + AR VFD M +
Sbjct: 124 NGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACF 183
Query: 248 -----------------RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
R++ SW ++L + + G+L AR +F +MP +++VSWS MI
Sbjct: 184 RCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVG 243
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
+ +G +AF FR++ R +PN + VLSA A A G +H V K G +
Sbjct: 244 FAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQI 303
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+ ++NALID YSKCG RLVFD+++ + VSW +MI G ++G EEA L
Sbjct: 304 ISVNNALIDTYSKCGNLDMARLVFDNMLRRS---AVSWTAMIAGMAMHGYGEEAIRL--- 357
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
FNEM S P+ TF S+L A + ++ G
Sbjct: 358 ----------------------------FNEMEESNIKPDSITFISILYACSHAGLVDLG 389
Query: 471 KDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLA 528
+++ G + + D Y ++G ++ + +MP N+I W ++ +
Sbjct: 390 CSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACS 449
Query: 529 ESG 531
G
Sbjct: 450 IHG 452
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI + K G ++ + F+ ++ +SWTA I G +G+ EA++LF ++ ES +KP
Sbjct: 309 ALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKP 368
Query: 183 NEVTFSSICKACAEINDFRLGLSVFG-LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ +TF SI AC+ LG S F ++ G E + ++ L + G++ A
Sbjct: 369 DSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDF 428
Query: 242 FDRM--EKRDVVSWTVILDVFIEMGDL---GEARRIFDEMPERNEVSWSVMIARYNQSGY 296
+M D+V W +L G+L G+ +R E+ N ++ Y +G
Sbjct: 429 VCQMPISPNDIV-WRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGK 487
Query: 297 PEEAFRLFRQMTRYSFK 313
++ L R MT K
Sbjct: 488 WKDVAALRRSMTHQRLK 504
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 276/461 (59%), Gaps = 10/461 (2%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKP 314
+++V+ + G A ++FDEMP R+ ++W+ ++ NQ+ + +F + S +P
Sbjct: 44 LVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ FS ++ A A+L ++ G VH H + D + ++L+D+Y+KCG + VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
DSI V + +SW +M+ GY +G+ EEA ELF +P +N SW+A+ISG+++ +
Sbjct: 164 DSI---RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 435 VFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F+VF EM +I + SS++ A A++A+ G+ +HG +I LGF VF+ AL
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK D+ +++ +F RM ++ +SWT ++ G+A+ G A++++ L+++M + PNE+
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T + +++ACSH G V+KG + F SM Y I+P+ +HYTC++D+L RSG L EAE+ I++
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL---WKLAEEHPAGYVLLSNIYASAGRW 670
MPF PD WA+LLS CK Q+ R +L +KL + P+ Y+LLSNIYASA W
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKD--PSTYILLSNIYASASLW 458
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R+ + E +RK G S VEVR + F+ +P
Sbjct: 459 GKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHP 499
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 220/463 (47%), Gaps = 41/463 (8%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKP 182
L++ + K G ++ F+ P ++ I+W + + Q S + L +F + S ++P
Sbjct: 44 LVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
++ FS++ KACA + G V + + V +SL+ + K G ++ A++VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D + ++ +SWT ++ + + G EA +F +P +N SW+ +I+ + QSG EAF
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 303 LFRQMTRYSFKP-NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F +M R + S ++ A A+L A +G VH V+ +G + VFISNALID+Y
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KC + + +F + +D VVSW S+I G +GQ E+A
Sbjct: 284 AKCSDVIAAKDIFSRMRHRD---VVSWTSLIVGMAQHGQAEKA----------------- 323
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-L 480
A++++M+ G PN+ TF ++ A + V +EKG++L + K
Sbjct: 324 --------------LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINL 539
G + T L D +SG ++ + + MP +E +W ++ G + I +
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 540 FEEMEKT--SITPNELTILSVLFA-CSHSGLVDKGLKYFNSME 579
+ + + P+ +LS ++A S G V + + ME
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 175/349 (50%), Gaps = 17/349 (4%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D VV + +++ + G L A+ +FD + +N +SWTA++SG+ K GR EE++ F P
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP-NEVTFSSICKACAEINDFRLGL 204
+N+ SWTA I GFVQ+G EA +F ++ V + + SSI ACA + G
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V GL+ GF+ V + N+LI + K +V A+ +F RM RDVVSWT ++ + G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
+A ++D+M NEV++ +I + G+ E+ LF+ MT+ Y +P+ +
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 320 SIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ +L L RSG+ A L + D AL+ + G + G + D +
Sbjct: 379 TCLLDLLG-----RSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Query: 378 VE----KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
V KD + + +++ L G++ EA+ M R D S++
Sbjct: 434 VSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 61/232 (26%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A + L + +HAH++K+GI + ++N L+++Y KCG VF
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVF-------- 61
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
D MP R+ ++W+++++ N+
Sbjct: 62 --------------------------DEMPHRDHIAWASVLTA-------------LNQA 82
Query: 443 LLSGEI--------------PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
LSG+ P+ FS+++ A A++ S++ G+ +H I + D +
Sbjct: 83 NLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVV 142
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
++L D YAK G + S++ VFD + KN ISWT MV G A+SG +E++ LF
Sbjct: 143 KSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
LCA +L K LH I+KLG L L + Y K G + +VFD MP ++
Sbjct: 12 LCARNR--TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 518 ISWTVMVRGLAESGYAKESI-NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
I+W ++ L ++ + +++ + + P++ +++ AC++ G +D G + +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG-RQVH 128
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTYKN 635
+ + + +VDM ++ G L+ A+ +S+ + ++ +W +++SG K+ +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGRK 187
Query: 636 EQIAE----RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
E+ E VKNL+ + L + + +G+ ++A +V
Sbjct: 188 EEALELFRILPVKNLY--------SWTALISGFVQSGKGLEAFSV 224
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 124/309 (40%), Gaps = 66/309 (21%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
I GR +HG +I G +++ L+ MY + A +I + D+V +I
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314
Query: 98 IQWGNLEEAQRLFDGMPER----NEVSWTALI-----SGFMKHGR-VEESMW--YFERNP 145
Q G E+A L+D M NEV++ LI GF++ GR + +SM Y R
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
Q+ +T + ++G EA L + P+E T++++ AC ++G+
Sbjct: 375 LQH---YTCLLDLLGRSGLLDEAENLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM-- 263
+ A + + +D ++ ++ +++
Sbjct: 429 I-------------------------------ADHLVSSFKLKDPSTYILLSNIYASASL 457
Query: 264 -GDLGEARRIFDEMPERNEVSWSVMIAR-------YNQSGYP--EEAFRLFRQM-----T 308
G + EARR EM R + S + R ++ +P E+ FRL +++
Sbjct: 458 WGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRI 517
Query: 309 RYSFKPNTS 317
R + P+TS
Sbjct: 518 RNGYVPDTS 526
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 300/555 (54%), Gaps = 32/555 (5%)
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
G S A+ + LLE + +V RLG +V + K H +
Sbjct: 29 GGSAFAIPELIPLLERAISTGDV--------------LRLGRAVHARLVKTALTSHTLLS 74
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD-LGEARRIFDEMPE--R 279
N L+ L ++ A + FD + ++ S+ +L + D +A +FD MP R
Sbjct: 75 NRLVALYSRLPSSAAAVAAFDDLPHKNAHSYNTLLAALLRRPDTFPDALHLFDTMPADAR 134
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSC--FSIV--LSALASLKALRS 334
N VS++ +++ G EA R+ ++ R F P + F++V +A A ++A R
Sbjct: 135 NLVSYNTLMSSLVHHGRQAEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIRAARP 194
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+H V+ G+E V ++NA+++ YSK ++ R +FD I +D V+W SMI G
Sbjct: 195 LREMHGAVVVSGMELTVIMANAMVNAYSKAWRVEEARHLFDQISIRDN---VTWTSMISG 251
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y +++EA ++FD MP ++ V+W+A+ISG+ ++ + D +F ML G P
Sbjct: 252 YCQVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFAL 311
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGF---PYDVFLGTALTDTYAKSGDIESSRRVFDR 511
SVL A A + + +GK+LH I++ P+++F+ AL D Y+K GD+ ++ VF R
Sbjct: 312 VSVLGACAKLGLVTRGKELHCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAAMAVFHR 371
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
MP+++ ISW MV G + +G K+S+ +FEEM + P +T L+VL ACSHSGLV G
Sbjct: 372 MPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNG 431
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP--FEP-DSNAWASLLS 628
SME + ++P HY +D L R+ +L EA +FI +P P + +W +LL
Sbjct: 432 RLILESMED-HGVEPRAEHYAAFIDALGRNRQLEEAIEFIKDLPSRIGPGTAGSWGALLG 490
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ + N ++AE + L+KL + YV+LSNIYA+AG+W DA VR LM EKGL+K
Sbjct: 491 ACRLHGNIELAEEVAEFLFKLEPGNSGRYVMLSNIYAAAGQWDDARRVRGLMKEKGLKKD 550
Query: 689 GGCSWVEVRNQVHFF 703
SW+EVR+ H F
Sbjct: 551 QAYSWIEVRSLKHVF 565
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 210/456 (46%), Gaps = 76/456 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L + I++ +++ GRA+H L+KT + L+ RL+ +Y SR A +
Sbjct: 42 LERAISTGDVLRLGRAVHARLVKTALTSHTLLSNRLVALY--SRLPSSAAAVAA------ 93
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV-EESMWYFERNP 145
FD +P +N S+ L++ ++ +++ F+ P
Sbjct: 94 -----------------------FDDLPHKNAHSYNTLLAALLRRPDTFPDALHLFDTMP 130
Query: 146 F--QNVISWTAAICGFVQNGFSFEALKLFLKL-----LESGVKPNEVTFSSICKACAEIN 198
+N++S+ + V +G EAL++ +L L G+ + T S+ ACA I
Sbjct: 131 ADARNLVSYNTLMSSLVHHGRQAEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIR 190
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
R + G + +G E V + N+++ K V+ AR +FD++ RD V+WT ++
Sbjct: 191 AARPLREMHGAVVVSGMELTVIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMIS 250
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ ++ L EA ++FD MP+++ V+W+ +I+ + Q+G + A LF +M P T
Sbjct: 251 GYCQVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFA 310
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKD---VFISNALIDLYSKCGETKDGRLVFD 375
VL A A L + G +H +L+ I D +FI NAL+D+YSKCG+ VF
Sbjct: 311 LVSVLGACAKLGLVTRGKELHCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAAMAVFH 370
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ E+D +SWNSM+ G+ NG +++
Sbjct: 371 RMPERD---FISWNSMVTGFSHNGLGKQS------------------------------- 396
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
A+F EML++G P TF +VL A + + G+
Sbjct: 397 LAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGR 432
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 173/386 (44%), Gaps = 45/386 (11%)
Query: 33 SQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI--VKDLNGFDLVV- 89
++ L + R + G+ +R+ + G R + E+ ++G +L V
Sbjct: 153 AEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGMELTVI 212
Query: 90 -HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
N M+NA + +EEA+ LFD + R+ V+WT++ISG+ + +++E++ F+ P ++
Sbjct: 213 MANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDMMPDKD 272
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
++WTA I G QNG AL+LF ++L GV P S+ ACA++ G +
Sbjct: 273 RVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACAKLGLVTRGKELHC 332
Query: 209 LIFKAGFEK---HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
I + ++ + N+L+ + K G++ A +VF RM +RD +SW ++ F G
Sbjct: 333 SILRRSIGSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMPERDFISWNSMVTGFSHNGL 392
Query: 266 LGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
++ IF+EM V++ ++ + SG + M + +P ++
Sbjct: 393 GKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLILESMEDHGVEPRAEHYAA 452
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+ AL + L + FI DL S+ G G
Sbjct: 453 FIDALGRNRQLEEAIE--------------FIK----DLPSRIGPGTAG----------- 483
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKEL 407
SW +++G L+G +E A+E+
Sbjct: 484 -----SWGALLGACRLHGNIELAEEV 504
>gi|218201765|gb|EEC84192.1| hypothetical protein OsI_30581 [Oryza sativa Indica Group]
Length = 715
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 189/642 (29%), Positives = 324/642 (50%), Gaps = 72/642 (11%)
Query: 106 AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
A+ +FDGM R +SW A ++ + GRV
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHARRGRVR------------------------------ 94
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
+AL ++ S +E T++S ACA R+G V + K+G + V SL
Sbjct: 95 -DALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASL 153
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM-PERNEVSW 284
+ ++D AR++FD + + + W+ ++ + L +A + M P R+ +W
Sbjct: 154 LDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAW 213
Query: 285 SVMIARYNQSG--YPEEAFRLFRQ-MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
+ +I+ Y + Y ++ LF Q + PN + VL A + AL G +H
Sbjct: 214 TAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGC 273
Query: 342 VLKIGIEKDVFISNALIDLYSKC-------------------------------GETKDG 370
+++ G E + I++AL+DLY + G T+D
Sbjct: 274 LIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDA 333
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+LVF + E D S+N MI Y G++E+ + +F+ MP+RN V+ ++++S L++
Sbjct: 334 KLVFSQMTEHDSG---SYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNG 390
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+ + +F ++ + G STF ++L A A++ ++E+GK +H + K F + ++GT
Sbjct: 391 KLEEGRKLFEQIRMKGT--RASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGT 448
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D Y+K G + +R F + N SWT ++ GLA++G+ E+I F M K ++ P
Sbjct: 449 ALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKP 508
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
NE+T L +L A + +GLV+KG+++F+SME Y + P HYTC VD+L R+ R+ EAE F
Sbjct: 509 NEITFLGILMASARAGLVNKGMRFFHSMES-YGVVPTVEHYTCAVDLLGRARRVREAEKF 567
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
I+ MP D W +LL+ C + ++ E+ + L+ + +H + YV +SNIYA G+W
Sbjct: 568 ISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKW 627
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
D + VR + +K GCSW+EV++ VH F + ++P+
Sbjct: 628 EDVVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPE 669
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 217/450 (48%), Gaps = 47/450 (10%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGFV 160
+L+ A+ LFD + NE+ W+ ++ ++ + +++ +R P +++ +WTA I G+
Sbjct: 162 DLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYA 221
Query: 161 Q--NGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+ N + ++L+LF++LL E GV PNE T+ S+ +AC ++ G S+ G + ++GFE
Sbjct: 222 RGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFES 281
Query: 218 HVSVCNSLITLSLKMGEVD-------------------------------LARSVFDRME 246
+ ++L+ L + G VD A+ VF +M
Sbjct: 282 EQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMT 341
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ D S+ +++ + + G L + RR+F+ MP RN V+ + M++ Q+G EE +LF Q
Sbjct: 342 EHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQ 401
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
+ + +T F +L A A++ + G VHA + K E + ++ AL+D+YSKCG
Sbjct: 402 IRMKGTRAST--FPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGC 459
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA----KELFDNMPKRNDVSWSAI 422
D R F I+ +VA SW S+I G NG EA + N K N++++ I
Sbjct: 460 VSDARAAFSCIMSPNVA---SWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGI 516
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
+ + F+ M G +P ++ CA + + ++ I K+
Sbjct: 517 LMASARAGLVNKGMRFFHSMESYGVVPTVEHYT---CAVDLLGRARRVREAEKFISKMPI 573
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
P D + AL + D+E +V +++
Sbjct: 574 PADGVVWGALLTACWYTMDLEMGEKVAEKL 603
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 169/371 (45%), Gaps = 15/371 (4%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR++HG LI++G E+ +T+ L+ +Y S +A + L L+ N +I I
Sbjct: 267 GRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFIS 326
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G E+A+ +F M E + S+ +I + GR+E+ FE P +N+++ + +
Sbjct: 327 MGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVL 386
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+QNG E KLF ++ G + + TF ++ ACA I G V L+ K FE +
Sbjct: 387 LQNGKLEEGRKLFEQIRMKGTRAS--TFPALLHACATIGTIEQGKMVHALLCKTPFESNG 444
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA----RRIFDE 275
V +L+ + K G V AR+ F + +V SWT +++ + G EA R+
Sbjct: 445 YVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKN 504
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+ NE+++ ++ ++G + R F M Y P ++ + L + +R
Sbjct: 505 NVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREA 564
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD---GRLVFDSIVEKDVAHVVSWNSMI 392
+ K+ I D + AL+ + C T D G V + + H+ ++ +M
Sbjct: 565 ---EKFISKMPIPADGVVWGALL---TACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMS 618
Query: 393 GGYGLNGQMEE 403
Y G+ E+
Sbjct: 619 NIYAKLGKWED 629
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 294/591 (49%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+AL+ +MK G + S F+ P +N ++WTA I G V+ G+S L F + S V+
Sbjct: 155 SALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVE 214
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ ++ KA A+ G S+ K GF+++ V NSL T+ K G++D
Sbjct: 215 YDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHT 274
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F +M DVVS W+ ++ Y Q G +
Sbjct: 275 FRKMRTLDVVS-------------------------------WTTIVTAYIQMGKEDCGL 303
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+ F++M + PN FS V+S A+ L+ G +HAHVL +G + ++N+++ LY
Sbjct: 304 QAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLY 363
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKCGE + ++F +M R+ ++WS
Sbjct: 364 SKCGE----------------------------------LASVSKVFCSMKFRDIITWST 389
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
II+ Y + + F + M G PN+ +SVL S+A LE+GK LH ++ +G
Sbjct: 390 IIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVG 449
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ +AL YAK G I + ++F + ISWT M+ G AE G+++E+I LFE
Sbjct: 450 LEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFE 509
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
++K + P+ +T + VL ACSH+G+VD G YFNSM Y+I P+ HY C++D+L R+
Sbjct: 510 NIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRA 569
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL +AE I SMP + D W++LL C+ + + +RA + KL ++ L+
Sbjct: 570 GRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLA 629
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NI+A+ G+W +A N+R LM KG+ K G S V+V++ V F +P+
Sbjct: 630 NIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQ 680
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 220/515 (42%), Gaps = 83/515 (16%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ G LHG +KTG+ ++ + LL MY+ + + ++ ++ + V +I
Sbjct: 133 LYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGL 192
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALI----------SGFMKHGRVEESMWY---FERN 144
++ G E F GM R++V + + SG + HGR + F+ N
Sbjct: 193 VRAGYSEAGLAYFSGMG-RSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDEN 251
Query: 145 PFQ---------------------------NVISWTAAICGFVQNGFSFEALKLFLKLLE 177
F +V+SWT + ++Q G L+ F ++
Sbjct: 252 SFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRA 311
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
S V PNE TFS++ CA + G + + GF +SV NS++TL K GE+
Sbjct: 312 SNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELAS 371
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
VF M+ RD+++W+ I IA Y+Q GY
Sbjct: 372 VSKVFCSMKFRDIITWSTI-------------------------------IAAYSQVGYG 400
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEAF +M KPN + VLS S+ L G +HAHVL +G+E+ + +AL
Sbjct: 401 EEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSAL 460
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK---R 414
I +Y+KCG + +F + D ++SW +MI GY +G +EA ELF+N+ K R
Sbjct: 461 IIMYAKCGSIAEASKIFMDSWKDD---IISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517
Query: 415 ND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKD 472
D V++ +++ DL F FN M I P+K + ++ L +
Sbjct: 518 PDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAET 577
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
L I + +D + + L GD++ +R
Sbjct: 578 L---IRSMPIQWDDVVWSTLLRACRIHGDVDCGQR 609
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 176/399 (44%), Gaps = 40/399 (10%)
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPN 315
L + ++ L +AR +FD++P+R+EVSW+ +I+ Y S EA RLF +M S + +
Sbjct: 56 LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
S+ L G ++H +K G+ VF+ +AL+D+Y K GE VFD
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
MP RN V+W+A+I+G + +
Sbjct: 176 ----------------------------------EMPTRNAVTWTAVITGLVRAGYSEAG 201
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
A F+ M S + ++ L ASA +L G+ +H + +K GF + F+ +LT
Sbjct: 202 LAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTM 261
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G ++ F +M + +SWT +V + G + F+ M +++ PNE T
Sbjct: 262 YNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTF 321
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+V+ C++ + G + + + + + ++ + S+ G L+ SM
Sbjct: 322 SAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANS-IMTLYSKCGELASVSKVFCSMK 380
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
F D W+++++ Y E A + L ++ E P
Sbjct: 381 FR-DIITWSTIIAA---YSQVGYGEEAFEYLSRMRSEGP 415
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/469 (19%), Positives = 184/469 (39%), Gaps = 65/469 (13%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY-------------------------------- 66
GR++H +K G + ++ L MY
Sbjct: 235 HGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYI 294
Query: 67 --------LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
L + K + A+ ++ + F V+ C A ++WG A L G
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V+ ++++ + K G + F F+++I+W+ I + Q G+ EA + ++
Sbjct: 355 VA-NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSE 413
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G KPNE +S+ C + G + + G E+ VC++LI + K G + A
Sbjct: 414 GPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQS 294
+F K D++SWT ++ + E G EA +F+ + + + V++ ++ + +
Sbjct: 474 SKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHA 533
Query: 295 GYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDV 351
G + F F M++ Y P+ + ++ L R+G A L + I+ D
Sbjct: 534 GMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLC-----RAGRLHDAETLIRSMPIQWDD 588
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ + L+ G+ G+ +++ D + ++ + G+ +EA + M
Sbjct: 589 VVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLM 648
Query: 412 PKRNDV---SWS---------AIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+ V WS A +SG H Q + ++ + E+ EI
Sbjct: 649 KSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEI 697
>gi|297744641|emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 272/469 (57%), Gaps = 5/469 (1%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS-VCNSL 225
EA+ L G++ + T +S+ + CA+ R G V + G ++ + + N L
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + K G+ AR VFD+M R++ SW +L + ++G + AR++FD+MPE++ VSW+
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWN 161
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
M+ + Q GY +EA R + + + + N F+ VL+ LK + VH +L
Sbjct: 162 TMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVA 221
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G +V +S++++D Y KCG D R +FD + +DV ++W +M+ GY G M+ A
Sbjct: 222 GFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDV---LAWTTMVSGYAKWGDMKSAN 278
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
ELF MP++N VSW+A+ISGY + +F +M+L P++ TFSS LCA AS+A
Sbjct: 279 ELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIA 338
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMV 524
SL+ GK +H ++++ F + + +AL D Y+K G + R+VFD M +K ++ W ++
Sbjct: 339 SLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTII 398
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA+ G +E+I + ++M ++ P+++T + +L ACSHSGLV +GL +F SM Y I
Sbjct: 399 SALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGI 458
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
P+ HY C++D+L R+G E D + MP++PD W +LL C+ +
Sbjct: 459 VPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIH 507
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 217/428 (50%), Gaps = 34/428 (7%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +IN + G EA+++FD M RN SW ++SG+ K G ++ + F++ P ++V+
Sbjct: 99 NHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVV 158
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
SW + Q G+ EAL+ + + + G++ N +F+ + C ++ + L V G I
Sbjct: 159 SWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQI 218
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
AGF +V + +S++ +K G + AR +FD M RDV++WT ++ + + GD+ A
Sbjct: 219 LVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSAN 278
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+F EMPE+N VSW+ +I+ Y ++G +A LF +M + +P+ FS L A AS+
Sbjct: 279 ELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIA 338
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
+L+ G +HA++L+I + + + +ALID+YSKCG GR VFD + K VV WN+
Sbjct: 339 SLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNK--LDVVLWNT 396
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
+I +G EEA ++ D+M + SG P+
Sbjct: 397 IISALAQHGCGEEAIQMLDDMVR-------------------------------SGAKPD 425
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
K TF +L A + +++G + + G L D ++G E
Sbjct: 426 KITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQL 485
Query: 510 DRMPDKNE 517
++MP K +
Sbjct: 486 EKMPYKPD 493
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 152/281 (54%), Gaps = 13/281 (4%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++V+ + +++A ++ G + +A++LFD M R+ ++WT ++SG+ K G ++ + F P
Sbjct: 226 NVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMP 285
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+N +SWTA I G+ +NG +AL+LF K++ V+P++ TFSS ACA I + G
Sbjct: 286 EKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQ 345
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMG 264
+ + + F+ + V ++LI + K G + + R VFD M K DVV W I+ + G
Sbjct: 346 IHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHG 405
Query: 265 DLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCF 319
EA ++ D+M + +++++ V++ + SG ++ F M+ Y P+ +
Sbjct: 406 CGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHY 465
Query: 320 SIVLSALASLKALRSGM--HVHAHVLKIGIEKDVFISNALI 358
+ ++ L R+G V + K+ + D + NAL+
Sbjct: 466 ACLIDLLG-----RAGCFEEVMDQLEKMPYKPDDRVWNALL 501
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 256/412 (62%), Gaps = 10/412 (2%)
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCG 365
M F P+ S V+SA A L A R G VHAH++K + D+ ++NAL+D+Y+KCG
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
T + R +FDS+ + V VS S++ GY + +E+A+ +F M ++N ++W+ +I+
Sbjct: 61 RTWEARCIFDSMPSRSV---VSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAA 117
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
Y ++ + + +F ++ P T+ +VL A ++A L+ G+ H ++K GF +D
Sbjct: 118 YAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFD 177
Query: 486 ------VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
VF+G +L D Y K+G I+ +VF+RM ++ +SW M+ G A++G AK++++L
Sbjct: 178 FGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHL 237
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
FE M ++ P+ +T++ VL AC HSGLVD+G ++F+ M + I P+ HYTC+VD+L
Sbjct: 238 FERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLG 297
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G L EAE+ I MP EPDS WASLL C+ +KN ++ ER L++L E+ YVL
Sbjct: 298 RAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVL 357
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LSN+YA G+W D VR+ M ++G+ K GCSW+E+ ++++ F + + +P
Sbjct: 358 LSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHP 409
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 172/384 (44%), Gaps = 47/384 (12%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ + A+ + +D D+V++N +++ + G EA+ +FD MP R+ VS T++++G+ K
Sbjct: 30 RQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAK 89
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
VE++ F + +NVI+W I + QNG EA++LF++L + P T+ ++
Sbjct: 90 SANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNV 149
Query: 191 CKACAEINDFRLGLSVFGLIFKAGF------EKHVSVCNSLITLSLKMGEVDLARSVFDR 244
AC I +LG + K GF E V V NSL+ + LK G +D VF+R
Sbjct: 150 LNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFER 209
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M RD VSW + MI Y Q+G ++A LF
Sbjct: 210 MAARDNVSW-------------------------------NAMIVGYAQNGRAKDALHLF 238
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSK 363
+M + P++ VLSA + G H H GI ++DL +
Sbjct: 239 ERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGR 298
Query: 364 CGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRNDVS 418
G K+ L+ D E D V W S++G L+ +E A LF+ P+ N
Sbjct: 299 AGHLKEAEELIKDMPTEPD---SVLWASLLGACRLHKNVELGERTAGRLFELDPE-NSGP 354
Query: 419 WSAIISGYLEHKQFDLVFAVFNEM 442
+ + + Y E ++ VF V M
Sbjct: 355 YVLLSNMYAEMGKWADVFRVRRSM 378
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 294/591 (49%), Gaps = 65/591 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+AL+ +MK G + S F+ P +N ++WTA I G V+ G+S L F + S V+
Sbjct: 155 SALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVE 214
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ ++ KA A+ G S+ K GF+++ V NSL T+ K G++D
Sbjct: 215 YDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHT 274
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F +M DVVS W+ ++ Y Q G +
Sbjct: 275 FRKMRTLDVVS-------------------------------WTTIVTAYIQMGKEDCGL 303
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+ F++M + PN FS V+S A+ L+ G +HAHVL +G + ++N+++ LY
Sbjct: 304 QAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLY 363
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SKCGE + ++F +M R+ ++WS
Sbjct: 364 SKCGE----------------------------------LASVSKVFCSMKFRDIITWST 389
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
II+ Y + + F + M G PN+ +SVL S+A LE+GK LH ++ +G
Sbjct: 390 IIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVG 449
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ +AL YAK G I + ++F + ISWT M+ G AE G+++E+I LFE
Sbjct: 450 LEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFE 509
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
++K + P+ +T + VL ACSH+G+VD G YFNSM Y+I P+ HY C++D+L R+
Sbjct: 510 NIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRA 569
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRL +AE I SMP + D W++LL C+ + + +RA + KL ++ L+
Sbjct: 570 GRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLA 629
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NI+A+ G+W +A N+R LM KG+ K G S V+V++ V F +P+
Sbjct: 630 NIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQ 680
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 219/515 (42%), Gaps = 83/515 (16%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ G LHG +K G+ ++ + LL MY+ + + ++ ++ + V +I
Sbjct: 133 LYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGL 192
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALI----------SGFMKHGRVEESMWY---FERN 144
++ G E F GM R++V + + SG + HGR + F+ N
Sbjct: 193 VRAGYSEAGLAYFSGMG-RSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDEN 251
Query: 145 PFQ---------------------------NVISWTAAICGFVQNGFSFEALKLFLKLLE 177
F +V+SWT + ++Q G L+ F ++
Sbjct: 252 SFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRA 311
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
S V PNE TFS++ CA + G + + GF +SV NS++TL K GE+
Sbjct: 312 SNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELAS 371
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
VF M+ RD+++W+ I IA Y+Q GY
Sbjct: 372 VSKVFCSMKFRDIITWSTI-------------------------------IAAYSQVGYG 400
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
EEAF +M KPN + VLS S+ L G +HAHVL +G+E+ + +AL
Sbjct: 401 EEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSAL 460
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK---R 414
I +Y+KCG + +F + D ++SW +MI GY +G +EA ELF+N+ K R
Sbjct: 461 IIMYAKCGSIAEASKIFMDSWKDD---IISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517
Query: 415 ND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKD 472
D V++ +++ DL F FN M I P+K + ++ L +
Sbjct: 518 PDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAET 577
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
L I + +D + + L GD++ +R
Sbjct: 578 L---IRSMPIQWDDVVWSTLLRACRIHGDVDCGQR 609
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 176/399 (44%), Gaps = 40/399 (10%)
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPN 315
L + ++ L +AR +FD++P+R+EVSW+ +I+ Y S EA RLF +M S + +
Sbjct: 56 LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
S+ L G ++H +K G+ VF+ +AL+D+Y K GE VFD
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
MP RN V+W+A+I+G + +
Sbjct: 176 ----------------------------------EMPTRNAVTWTAVITGLVRAGYSEAG 201
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
A F+ M S + ++ L ASA +L G+ +H + +K GF + F+ +LT
Sbjct: 202 LAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTM 261
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G ++ F +M + +SWT +V + G + F+ M +++ PNE T
Sbjct: 262 YNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTF 321
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+V+ C++ + G + + + + + ++ + S+ G L+ SM
Sbjct: 322 SAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANS-IMTLYSKCGELASVSKVFCSMK 380
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
F D W+++++ Y E A + L ++ E P
Sbjct: 381 FR-DIITWSTIIAA---YSQVGYGEEAFEYLSRMRSEGP 415
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/469 (19%), Positives = 184/469 (39%), Gaps = 65/469 (13%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY-------------------------------- 66
GR++H +K G + ++ L MY
Sbjct: 235 HGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYI 294
Query: 67 --------LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
L + K + A+ ++ + F V+ C A ++WG A L G
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V+ ++++ + K G + F F+++I+W+ I + Q G+ EA + ++
Sbjct: 355 VA-NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSE 413
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G KPNE +S+ C + G + + G E+ VC++LI + K G + A
Sbjct: 414 GPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQS 294
+F K D++SWT ++ + E G EA +F+ + + + V++ ++ + +
Sbjct: 474 SKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHA 533
Query: 295 GYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDV 351
G + F F M++ Y P+ + ++ L R+G A L + I+ D
Sbjct: 534 GMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLC-----RAGRLHDAETLIRSMPIQWDD 588
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ + L+ G+ G+ +++ D + ++ + G+ +EA + M
Sbjct: 589 VVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLM 648
Query: 412 PKRNDV---SWS---------AIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+ V WS A +SG H Q + ++ + E+ EI
Sbjct: 649 KSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEI 697
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/459 (38%), Positives = 264/459 (57%), Gaps = 35/459 (7%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++F ++P+ + W+ I +QS P A L+ QM + S KP+ F VL A
Sbjct: 60 ALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTK 119
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L + +G VH VL++G +V + N L+ ++KCG+ K +FD + D VV+W
Sbjct: 120 LFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFD---DSDKGDVVAW 176
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF-------------DLV 435
+++I GY G + A++LFD MPKR+ VSW+ +I+ Y +H + D+V
Sbjct: 177 SALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIV 236
Query: 436 ------------------FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+F+EM GE P++ T S+L A A + LE G+ +H KI
Sbjct: 237 SWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKI 296
Query: 478 IKLG-FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
I++ LG AL D YAK G+I + RVF + DK+ +SW ++ GLA G+A+ES
Sbjct: 297 IEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEES 356
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ LF EM+ T + P+E+T + VL ACSH+G VD+G +YF+ M+ Y I+P RH CVVD
Sbjct: 357 LGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVD 416
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
ML R+G L EA +FI SM EP++ W SLL CK + + ++A+RA + L ++ +
Sbjct: 417 MLGRAGLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGD 476
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
YVLLSN+YAS G W A NVRKLM + G+ K+ G S+VE
Sbjct: 477 YVLLSNVYASQGEWDGAENVRKLMDDNGVTKNRGSSFVE 515
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 205/473 (43%), Gaps = 109/473 (23%)
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ ++ F + P + W I G Q+ A+ L+ ++ + VKP+ TF + KA
Sbjct: 57 IRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKA 116
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C ++ G +V G + + GF +V V N+L+ K G++ +A +FD +K DVV+W
Sbjct: 117 CTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAW 176
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF--------- 304
+ ++ + + GDL AR++FDEMP+R+ VSW+VMI Y + G E A RLF
Sbjct: 177 SALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIV 236
Query: 305 -----------RQMTRYSFK-----------PNTSCFSIVLSALASLKALRSGMHVHAHV 342
R + R + + P+ +LSA A L L SG VHA +
Sbjct: 237 SWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKI 296
Query: 343 LKIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+++ K + NAL+D+Y+KCG VF I +KD VVSWNS+I G +G
Sbjct: 297 IEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKD---VVSWNSVISGLAFHGHA 353
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EE+ +F EM ++ P++ TF VL A
Sbjct: 354 EES-------------------------------LGLFREMKMTKVCPDEVTFVGVLAAC 382
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+ +G+++ R F M +K +I T
Sbjct: 383 -----------------------------------SHAGNVDEGNRYFHLMKNKYKIEPT 407
Query: 522 V-----MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
+ +V L +G KE+ N M+ I PN + S+L AC G V+
Sbjct: 408 IRHCGCVVDMLGRAGLLKEAFNFIASMK---IEPNAIVWRSLLGACKVHGDVE 457
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 37/383 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK T V G A+HG +++ G + LL+ + A +I D + D
Sbjct: 113 VLKACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGD 172
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + +I Q G+L A++LFD MP+R+ VSW +I+ + KHG +E + F+ P
Sbjct: 173 VVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPM 232
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++++SW A I G+V + EAL+LF ++ G P+EVT S+ ACA++ D G V
Sbjct: 233 KDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKV 292
Query: 207 FGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
I + K ++ N+L+ + K G + A VF + +DVVSW +
Sbjct: 293 HAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSV--------- 343
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
I+ G+ EE+ LFR+M P+ F VL+A
Sbjct: 344 ----------------------ISGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAA 381
Query: 326 LASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-A 383
+ + G + H K IE + ++D+ + G K+ F+ I +
Sbjct: 382 CSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEA---FNFIASMKIEP 438
Query: 384 HVVSWNSMIGGYGLNGQMEEAKE 406
+ + W S++G ++G +E AK
Sbjct: 439 NAIVWRSLLGACKVHGDVELAKR 461
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 63/302 (20%)
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SM+G + + A ++F +P+ + W+ I G + A++ +M P
Sbjct: 46 SMVGPNATSAVIRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKP 105
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY------------------------- 484
+ TF VL A + + G +HG++++LGF
Sbjct: 106 DNFTFPFVLKACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIF 165
Query: 485 ------DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV-----RGLAES--- 530
DV +AL YA+ GD+ +R++FD MP ++ +SW VM+ G ES
Sbjct: 166 DDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARR 225
Query: 531 ------------------GYA-----KESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
GY +E++ LF+EM P+E+T+LS+L AC+ G
Sbjct: 226 LFDEAPMKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGD 285
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
++ G K + + K + +VDM ++ G + +A + + + D +W S++
Sbjct: 286 LESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVR-VFWLIRDKDVVSWNSVI 344
Query: 628 SG 629
SG
Sbjct: 345 SG 346
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
Query: 473 LHGKIIKLGFPYDVFLGTALT--DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
++G +GF + L TA++ A S I + ++F ++P + W +RG ++S
Sbjct: 26 VNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMWNTYIRGSSQS 85
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
++ L+ +M++ S+ P+ T VL AC+ V+ G + + N
Sbjct: 86 HDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRL-GFGSNVVV 144
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
++ ++ G L A D + + D AW++L++G + +A KL
Sbjct: 145 RNTLLVFHAKCGDLKVATDIFDDSD-KGDVVAWSALIAGYAQRGDLSVAR-------KLF 196
Query: 651 EEHP 654
+E P
Sbjct: 197 DEMP 200
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 306/591 (51%), Gaps = 68/591 (11%)
Query: 123 ALISGFMKHG-RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
ALI F K G ++ + F++ +N+++WT I + Q G +A+ LF +LL S
Sbjct: 186 ALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYT 245
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P++ T +S+ AC E+ F LG + + ++G
Sbjct: 246 PDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLAS------------------------ 281
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
DV ++D++ + + +R+IF+ M N +SW+ +I+ Y QS +EA
Sbjct: 282 -------DVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAI 334
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+LF M PN FS VL A ASL G +H +K+G+ + N+LI++Y
Sbjct: 335 KLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMY 394
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
++ +G ME A++ F+ + ++N +S++
Sbjct: 395 AR----------------------------------SGTMECARKAFNILFEKNLISYNT 420
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
K D + +E+ +G + T++ +L +A + ++ KG+ +H I+K G
Sbjct: 421 AADA--NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSG 478
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F ++ + AL Y+K G+ E++ +VF+ M +N I+WT ++ G A+ G+A +++ LF
Sbjct: 479 FGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFY 538
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM + + PNE+T ++VL ACSH GL+D+ K+FNSM ++I P HY C+VD+L RS
Sbjct: 539 EMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRS 598
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L EA +FINSMPF+ D+ W + L C+ ++N ++ E A K + + PA Y+LLS
Sbjct: 599 GLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLS 658
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+YAS GRW D +RK M +K L K G SW+EV NQVH F +P+
Sbjct: 659 NLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQ 709
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 206/456 (45%), Gaps = 77/456 (16%)
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
FE+L+ + L+ + S + KAC + LG + + +G + NSL
Sbjct: 21 FESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSL 80
Query: 226 ITLSLKMGEVDLARSVFDRM--EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
ITL K G+ + A S+F M KRD+VSW+ I+ F + M R ++
Sbjct: 81 ITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFAN-----------NSMESRALLT 129
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+ M+ Q +R PN CF+ +L + ++ +G+ + A +L
Sbjct: 130 FLHML-----------------QCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLL 172
Query: 344 KIG-IEKDVFISNALIDLYSKCG-ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
K G + V + ALID+++K G + + R+VFD + K+ +V+W MI Y G +
Sbjct: 173 KTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKN---LVTWTLMITRYSQLGLL 229
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
++A +L F +L+S P+K T +S+L A
Sbjct: 230 DDAVDL-------------------------------FCRLLVSEYTPDKFTLTSLLSAC 258
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+ GK LH +I+ G DVF+G L D YAKS +E+SR++F+ M N +SWT
Sbjct: 259 VELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWT 318
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL-KYFNSMEP 580
++ G +S +E+I LF M +TPN T SVL AC + L D G+ K +
Sbjct: 319 ALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKAC--ASLPDFGIGKQLHGQ-- 374
Query: 581 IYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFIN 612
IK CV ++M +RSG + A N
Sbjct: 375 --TIKLGLSTINCVGNSLINMYARSGTMECARKAFN 408
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 151/334 (45%), Gaps = 43/334 (12%)
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
S++L A L G +H ++ G+ D + N+LI LYSKCG+
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGD------------- 89
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM--PKRNDVSWSAIISGYLEHKQFDLVFA 437
W E A +F NM KR+ VSWSAIIS + +
Sbjct: 90 --------W-------------ENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALL 128
Query: 438 VFNEMLLSGE---IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALT 493
F ML PN+ F+++L + ++ G + ++K G F V +G AL
Sbjct: 129 TFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALI 188
Query: 494 DTYAKSG-DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D + K G DI+S+R VFD+M KN ++WT+M+ ++ G ++++LF + + TP++
Sbjct: 189 DMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDK 248
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
T+ S+L AC G K +S + + +VDM ++S + + N
Sbjct: 249 FTLTSLLSACVELEFFSLG-KQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFN 307
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+M + +W +L+SG + EQ A + N+
Sbjct: 308 TM-LHHNVMSWTALISGYVQSRQEQEAIKLFCNM 340
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 71/197 (36%)
Query: 10 SINPETSFNSYIE---------TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
+++ + SFN +E T CLL +++G +H ++K+G
Sbjct: 428 ALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGF-------- 479
Query: 61 RLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
G +L ++N +I+ + GN E A ++F+ M RN ++
Sbjct: 480 -----------------------GTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVIT 516
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
WT++ISGF KH GF+ +AL+LF ++LE GV
Sbjct: 517 WTSIISGFAKH-------------------------------GFATKALELFYEMLEIGV 545
Query: 181 KPNEVTFSSICKACAEI 197
KPNEVT+ ++ AC+ +
Sbjct: 546 KPNEVTYIAVLSACSHV 562
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 210/645 (32%), Positives = 322/645 (49%), Gaps = 74/645 (11%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK--- 130
EA + + D V N MI+ +Q + A++LFD MP R+ VSW ++SG+
Sbjct: 56 EARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSGYFSCCG 115
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
VEE FE P ++ +SW I G+ +NG +ALKLF + E N V+++++
Sbjct: 116 SRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEH----NAVSYNAV 171
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD- 249
D S G S+C +LI+ ++ GE+DLA + D
Sbjct: 172 ITGFLLNGDVE---SAVGFFRTMPEHDSTSLC-ALISGLVRNGELDLAAGILRECGNGDD 227
Query: 250 -----VVSWTVILDVFIEMGDLGEARRIFDEMP-------------ERNEVSWSVMIARY 291
V ++ ++ + + G + EARR+FD +P RN VSW+ M+ Y
Sbjct: 228 GKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCY 287
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
++G A LF +M +E+D
Sbjct: 288 VKAGDIVFARELFDRM---------------------------------------VERDN 308
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
N LI Y + ++ +F + DV +SWNS+I G G + AK+ F+ M
Sbjct: 309 CSWNTLISCYVQISNMEEASKLFREMPSPDV---LSWNSIISGLAQKGDLNLAKDFFERM 365
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
P +N +SW+ II+GY +++ + +F+EM L GE P+K T SSV+ S + L GK
Sbjct: 366 PHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVSTGLVDLYLGK 425
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAES 530
LH + K P D + +L Y++ G I + VF+ + K+ I+W M+ G A
Sbjct: 426 QLHQLVTKTVLP-DSPINNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASH 484
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G A E++ LF+ M++ I P +T +SVL AC+H+GLV++G + F SM Y I+P H
Sbjct: 485 GSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWRQFKSMINDYGIEPRVEH 544
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
+ +VD+L R G+L EA D IN+MPF+PD W +LL C+ + N ++A A L +L
Sbjct: 545 FASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLGACRVHNNVELALVAADALIRLE 604
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
E A YVLL N+YA+ G+W DA +VR LM EK ++K G SWV+
Sbjct: 605 PESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYSWVD 649
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 215/495 (43%), Gaps = 85/495 (17%)
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
GSR E + + + D V N +I+ + G +++A +LF+ MPE N VS+ A+I+G
Sbjct: 115 GSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITG 174
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL------ESGVK 181
F+ +G VE ++ +F P + S A I G V+NG L L +L + G
Sbjct: 175 FLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNG----ELDLAAGILRECGNGDDGKD 230
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLI---------FKAGFEKHVSVCNSLITLSLKM 232
++++ + +F +I K F ++V NS++ +K
Sbjct: 231 DLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKA 290
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEM----------------------------- 263
G++ AR +FDRM +RD SW ++ ++++
Sbjct: 291 GDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSPDVLSWNSIISGLA 350
Query: 264 --GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
GDL A+ F+ MP +N +SW+ +IA Y ++ + A +LF +M +P+ S
Sbjct: 351 QKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSS 410
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
V+S L L G +H V K + D I+N+LI +YS+CG D VF+ I K
Sbjct: 411 VISVSTGLVDLYLGKQLHQLVTKT-VLPDSPINNSLITMYSRCGAIVDACTVFNEI--KL 467
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V++WN+MIGGY +G EA ELF M KR +
Sbjct: 468 YKDVITWNAMIGGYASHGSAAEALELFKLM-KRLKIH----------------------- 503
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
P TF SVL A A +E+G + I G V +L D + G
Sbjct: 504 -------PTYITFISVLNACAHAGLVEEGWRQFKSMINDYGIEPRVEHFASLVDILGRQG 556
Query: 501 DIESSRRVFDRMPDK 515
++ + + + MP K
Sbjct: 557 QLQEAMDLINTMPFK 571
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 167/384 (43%), Gaps = 67/384 (17%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
+++ Y+ + + A E+ + D N +I+ +Q N+EEA +LF MP + +SW
Sbjct: 283 MMMCYVKAGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSPDVLSW 342
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
++ISG + G + + +FER P +N+ISW I G+ +N A+KLF ++ G +
Sbjct: 343 NSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGER 402
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P++ T SS+ + D LG + L+ K + NSLIT+ + G + A +V
Sbjct: 403 PDKHTLSSVISVSTGLVDLYLGKQLHQLVTKTVLPDS-PINNSLITMYSRCGAIVDACTV 461
Query: 242 FDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
F+ ++ +DV++W + MI Y G EA
Sbjct: 462 FNEIKLYKDVITW-------------------------------NAMIGGYASHGSAAEA 490
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF+ M R P F VL+A A HA +++ G + F S
Sbjct: 491 LELFKLMKRLKIHPTYITFISVLNACA-----------HAGLVEEGWRQ--FKS------ 531
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-W 419
++ D +E V H S++ G GQ++EA +L + MP + D + W
Sbjct: 532 -----------MINDYGIEPRVEHFA---SLVDILGRQGQLQEAMDLINTMPFKPDKAVW 577
Query: 420 SAIISGYLEHKQFDLVFAVFNEML 443
A++ H +L + ++
Sbjct: 578 GALLGACRVHNNVELALVAADALI 601
>gi|5803274|dbj|BAA83584.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|55296350|dbj|BAD68395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596022|gb|EAZ35802.1| hypothetical protein OsJ_20095 [Oryza sativa Japonica Group]
Length = 763
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 200/684 (29%), Positives = 341/684 (49%), Gaps = 24/684 (3%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY--LGSRK 71
TSF++ + C L + GR +HG + K+ ++ L+ MY G
Sbjct: 101 HTSFSTALSACARL-------EALEMGRCVHGLVFKSCSSGNVFVGASLITMYANCGVVS 153
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
LE +++ + ++ + N +I+ + + A++ FD MP RN VSWTA+I G
Sbjct: 154 CLE--QVLDGVESPNVALWNALISGLVMNHRVGYARKAFDRMPVRNVVSWTAMIKGHFTA 211
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
V+ + F+ P +N +SW I GFV + EA++LF L+ +G + V I
Sbjct: 212 HEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIV 271
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
A A + R G + GL K+GF + + SL+ + K ++ AR FD+ME V
Sbjct: 272 NAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVG 331
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW +L +I + EAR++FD M R+++SW+ MI Y G +A L+ +MT S
Sbjct: 332 SWNAMLCGYIYSDKIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKS 391
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDG 370
+ T+ S + +GM A + + + DV L+ Y K G D
Sbjct: 392 LEAATALMSWFID---------NGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDA 442
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+F + ++ V V++N MI G G++ EA +LF+ P R+ V+WS +++G +
Sbjct: 443 LDLFHMMQKRTV---VTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNG 499
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+ +MLLS P++S SS++ ++ + + G+ H IK+G + +
Sbjct: 500 LIHEALQFYKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQN 559
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
+L Y K G++ ++ +FD M +++++W ++ G A + + ++ +FE M K + P
Sbjct: 560 SLISLYCKCGEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDP 619
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+++T L VL AC+H L+++ +FN+M Y I PN HY C+VD+ R + EAE
Sbjct: 620 DDITFLGVLSACNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRKCMIKEAEGL 679
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
+ SMPFEPDS W SLLSGC+ N+++AE A L + Y+ L +++ +
Sbjct: 680 VKSMPFEPDSAIWTSLLSGCRLTGNDKLAEHAASQLIAIDPCTKMPYLHLISVHGLTNKS 739
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWV 694
++R + K G SW+
Sbjct: 740 TVIDSLRSQIKSTATEKDVGYSWI 763
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 253/524 (48%), Gaps = 59/524 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L++ ++ GR+E + F+ P ++V+SW + + G A+ FL++ G +P+
Sbjct: 41 LMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFRPD 100
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+FS+ ACA + +G V GL+FK+ +V V SLIT+ G V V D
Sbjct: 101 HTSFSTALSACARLEALEMGRCVHGLVFKSCSSGNVFVGASLITMYANCGVVSCLEQVLD 160
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+E +V W ++ + +G AR+ FD MP RN VSW+ MI + + + AF+L
Sbjct: 161 GVESPNVALWNALISGLVMNHRVGYARKAFDRMPVRNVVSWTAMIKGHFTAHEVDMAFQL 220
Query: 304 FRQM----------------TRYSFKPNTSCFSI---------------VLSALASLKAL 332
F+ M T F F+ +++A A +K++
Sbjct: 221 FKLMPVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVNAFAGMKSI 280
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
R G +H +K G D+ + +L+ +Y K + + RL FD + + HV SWN+M+
Sbjct: 281 RGGRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKM---EGNHVGSWNAML 337
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
GY + +++EA++LFD+M R+ +SW+++I+GY+ + + + E+ +K
Sbjct: 338 CGYIYSDKIDEARKLFDSMNNRDKISWNSMINGYINDGR----------IADATELYSKM 387
Query: 453 TFSSVLCASASVA------SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
T S+ A+A ++ L+K +D+ + ++ DV T L Y K G ++ +
Sbjct: 388 TEKSLEAATALMSWFIDNGMLDKARDMFYNMPQI----DVMSCTTLLFGYVKGGHMDDAL 443
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+F M + +++ VM+ GL G E+ LF E S T + +T ++ + +G
Sbjct: 444 DLFHMMQKRTVVTYNVMISGLFHQGKITEAYKLFNE----SPTRDSVTWSCLVAGLATNG 499
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
L+ + L+++ M + NI+P+ + ++ LS + + F
Sbjct: 500 LIHEALQFYKKM-LLSNIRPSESVVSSLISCLSNYSMMVHGQQF 542
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 208/500 (41%), Gaps = 123/500 (24%)
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
VS N L+ L+ G ++ AR VFD M +RDVVSW I+ V +AR
Sbjct: 35 VSGNNRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAV--------QAR-------- 78
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+G A F +M R F+P+ + FS LSA A L+AL G V
Sbjct: 79 ---------------AGSHGRAVGAFLEMRRQGFRPDHTSFSTALSACARLEALEMGRCV 123
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA--------------- 383
H V K +VF+ +LI +Y+ CG V D + +VA
Sbjct: 124 HGLVFKSCSSGNVFVGASLITMYANCGVVSCLEQVLDGVESPNVALWNALISGLVMNHRV 183
Query: 384 -------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+VVSW +MI G+ +++ A +LF MP +N VSW +I G++ H+
Sbjct: 184 GYARKAFDRMPVRNVVSWTAMIKGHFTAHEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHE 243
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+F +FN ++++GE ++ A A + S+ G+ +HG +K GF YD+ L
Sbjct: 244 KFSEAVELFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEA 303
Query: 491 ALTDTYAKSGD-------------------------------IESSRRVFDRMPDKNEIS 519
+L Y KS D I+ +R++FD M ++++IS
Sbjct: 304 SLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMNNRDKIS 363
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITP---------------------------NE 552
W M+ G G ++ L+ +M + S+ +
Sbjct: 364 WNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKARDMFYNMPQIDV 423
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
++ ++LF G +D L F+ M+ K Y ++ L G+++EA N
Sbjct: 424 MSCTTLLFGYVKGGHMDDALDLFHMMQ-----KRTVVTYNVMISGLFHQGKITEAYKLFN 478
Query: 613 SMPFEPDSNAWASLLSGCKT 632
P DS W+ L++G T
Sbjct: 479 ESPTR-DSVTWSCLVAGLAT 497
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 215/685 (31%), Positives = 337/685 (49%), Gaps = 85/685 (12%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
+D+ S N+++ G G L E L +M+ G R D+ F V
Sbjct: 158 RDVFSWNVMVGGYGKAGLL-------EEALDLYHRMMWAGVRP---------DVYTFPCV 201
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ +C + + G A L G E +V AL++ + K G V + F+ +
Sbjct: 202 LRSCGGVPDWRMGREVHAHVLRFGFAEEVDV-LNALMTMYAKCGDVVAARKVFDSMAVMD 260
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
ISW A I G +NG L+LFL +L+ V+PN +T +S+ A ++D + G
Sbjct: 261 CISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHG 320
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L K GF V+ CNSLI + +G + AR+VF RM+ RD +SWT
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWT-------------- 366
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
MI+ Y ++G+P++A ++ M + P+ + L+A A
Sbjct: 367 -----------------AMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACAC 409
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L +L G+ +H G V ++NAL+++Y+K VF + EKD VVSW
Sbjct: 410 LGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKD---VVSW 466
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+SMI G+ N H+ F+ ++ + +L+
Sbjct: 467 SSMIAGFCFN------------------------------HRNFEALY--YFRHMLADVK 494
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN TF + L A A+ +L GK++H +++ G Y+ +L AL D Y K G +
Sbjct: 495 PNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQ 554
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F K+ +SW +M+ G G + +++ F +M K P+E+T +++L ACS G+V
Sbjct: 555 FCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMV 614
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+G + F+SM Y+I PN +HY C+VD+LSR G+L+EA +FIN MP PD+ W +LL+
Sbjct: 615 SEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLN 674
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGY-VLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
GC+ +++ ++ E A K + +L E + AGY VLL ++YA AG W VRK M EKGL
Sbjct: 675 GCRIHRHVELGELAAKYVLEL-EPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDH 733
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNPK 712
GCSWVEV+ VH F + +P+
Sbjct: 734 DSGCSWVEVKGVVHAFLTDDESHPQ 758
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 223/483 (46%), Gaps = 105/483 (21%)
Query: 173 LKLLESGVKPNE----VTFSSIC----------KACAEINDFRLGLSVFGLIFKAGFEKH 218
L LLES +P + V +C +ACA +D + FGL
Sbjct: 82 LWLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRH---AWFGL--------- 129
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ N+++++ ++ GE A VF +M +RDV SW
Sbjct: 130 -RLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSW------------------------- 163
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
+VM+ Y ++G EEA L+ +M +P+ F VL + + R G V
Sbjct: 164 ------NVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREV 217
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HAHVL+ G ++V + NAL+ +Y+KCG+ R VFDS+ D +SWN+MI G+ N
Sbjct: 218 HAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMD---CISWNAMIAGHFEN 274
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSV 457
G+ ELF M L E+ PN T +SV
Sbjct: 275 GECNAGLELFLTM--------------------------------LQDEVQPNLMTITSV 302
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
AS ++ + K++HG +K GF DV +L YA G + +R VF RM ++
Sbjct: 303 TVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDA 362
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
+SWT M+ G ++G+ +++ ++ ME +++P+++TI S L AC+ G +D G+K
Sbjct: 363 MSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHEL 422
Query: 578 MEP----IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKT 632
E Y + N +++M ++S R+ +A + MP E D +W+S+++G C
Sbjct: 423 AESKGFMSYVVVTNA-----LLEMYAKSKRIDKAIEVFKCMP-EKDVVSWSSMIAGFCFN 476
Query: 633 YKN 635
++N
Sbjct: 477 HRN 479
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 9/258 (3%)
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N+M+ G+ A +F MP+R+ SW+ ++ GY + + +++ M+ +G
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR 192
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ TF VL + V G+++H +++ GF +V + AL YAK GD+ ++R+V
Sbjct: 193 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKV 252
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M + ISW M+ G E+G + LF M + + PN +TI SV A SGL+
Sbjct: 253 FDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA---SGLL 309
Query: 569 D--KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
K + + + ++ M + G + +A + M D+ +W ++
Sbjct: 310 SDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTR-DAMSWTAM 368
Query: 627 LSGCKTYKNEQIAERAVK 644
+SG Y+ ++A++
Sbjct: 369 ISG---YEKNGFPDKALE 383
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 311/625 (49%), Gaps = 68/625 (10%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
V+ CM ++G A + G+ E + V + L+ + + EE+ F R
Sbjct: 258 VLKCCMELGLAKYGQSVHASVIKRGL-ETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEP 316
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+V+ +A I F ++ ++EAL LF+K+ GVKPN F I + D L SV
Sbjct: 317 DVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVH 376
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
I K+GF + + V D IL++++++G +
Sbjct: 377 AYIVKSGFA--------------------MLKGVGD-----------AILNMYVKVGAVQ 405
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A FD + E + SW+ +++ + E+ R+F+QM F N + VL
Sbjct: 406 DATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCT 465
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
SL LR G VHA +LK G++ D +S L+D+Y++ G LVF+ + E
Sbjct: 466 SLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE-------- 517
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
R+ SW+ I+SGY + ++ + V F ML
Sbjct: 518 --------------------------RDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENI 551
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ +T + L + +ASL G LH IK G+ V G AL D Y K G+I +
Sbjct: 552 RPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVSG-ALVDMYVKCGNIADAEM 610
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+F +++++W ++ G ++ G+ ++++ F++M P+ +T + VL ACSH+GL
Sbjct: 611 LFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGL 670
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+++G KYF S+ IY I P HY C+VD+LS++GRL EAE IN MP PDS+ W ++L
Sbjct: 671 LNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTIL 730
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
C+ ++N +IAERA + L++L + +LLSNIYA GRW D VR ++ + G++K
Sbjct: 731 GACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKK 790
Query: 688 SGGCSWVEVRNQVHFFFQKTDHNPK 712
GCSW+E+ Q+H F + D PK
Sbjct: 791 EPGCSWIEINGQIHMFLSQ-DGCPK 814
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 141/625 (22%), Positives = 255/625 (40%), Gaps = 152/625 (24%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L+D + + +G+ LH L+++ +H + +L LL MY
Sbjct: 57 LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMY--------------------- 95
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
+ G L +A+R+FDGM P +
Sbjct: 96 ----------CKCGRLVDARRVFDGM-------------------------------PHR 114
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
++++WTA I G S +AL +F ++ + G+ PN T +S+ KAC+ + + V
Sbjct: 115 DIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVH 174
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + K V +SL+ GE+D A +V + +R VSW +L+ + GD
Sbjct: 175 GQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDY- 233
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
RR+ ++I + SG ++++Y+ VL
Sbjct: 234 --RRVM------------IIIEKLVASG---------DEISKYTLP-------TVLKCCM 263
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L + G VHA V+K G+E D +++ L+++YS+C ++ VF I E DV H
Sbjct: 264 ELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHC-- 321
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
++MI FD R+D++W A+ DL F +M G
Sbjct: 322 -SAMI-------------SCFD----RHDMAWEAL----------DL----FVKMSGMGV 349
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN F + ++ + +H I+K GF +G A+ + Y K G ++ +
Sbjct: 350 KPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATV 409
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS---- 563
FD + + + SW ++ ++ + +F++M + N+ T +SVL C+
Sbjct: 410 TFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMN 469
Query: 564 -------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
H+ ++ GL+ + + +VDM ++SG + A +
Sbjct: 470 LRFGTQVHACILKSGLQNDTDVSRM------------LVDMYAQSGCFTSACLVFEQLK- 516
Query: 617 EPDSNAWASLLSG-CKTYKNEQIAE 640
E D+ +W ++SG KT + E++ E
Sbjct: 517 ERDAFSWTVIMSGYAKTEEAEKVVE 541
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 183/396 (46%), Gaps = 46/396 (11%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L+++ + G L +ARR+FD MP R+ V+W+ MI+ + +G ++A +F +M + PN
Sbjct: 91 LLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPN 150
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ VL A + + VH V+K+ D ++ ++L++ Y+ CGE
Sbjct: 151 GFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGE--------- 201
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
++ A+ + +P+R+DVSW+A+++GY H + V
Sbjct: 202 -------------------------LDAAETVLLGLPERSDVSWNALLNGYARHGDYRRV 236
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+ +++ SG+ +K T +VL + + G+ +H +IK G D L + L +
Sbjct: 237 MIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEM 296
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y++ E + VF R+ + + + + M+ A E+++LF +M + PN
Sbjct: 297 YSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIF 356
Query: 556 LSVLFACSHSGLVD--KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DF 610
+ + S +G + + + + +K G +++M + G + +A D
Sbjct: 357 VGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVG---DAILNMYVKVGAVQDATVTFDL 413
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
I+ EPD+ +W ++LS + N + R K +
Sbjct: 414 IH----EPDTFSWNTILSAFYSGSNCEQGLRIFKQM 445
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 142/367 (38%), Gaps = 73/367 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V +++ Q G A +F+ + ER+ SWT ++SG+ K E+ + YF
Sbjct: 488 DTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFR--- 544
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+L ++P++ T + C+++ GL
Sbjct: 545 ----------------------------SMLRENIRPSDATLAVSLSVCSDMASLGSGLQ 576
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ K+G+ V V +L+ + +K G + A +F E RD V+W I
Sbjct: 577 LHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTI--------- 626
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
I Y+Q G+ +A F+QM +P+ F VLSA
Sbjct: 627 ----------------------ICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSA 664
Query: 326 LASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ L G + I GI + ++D+ SK G + + + + +
Sbjct: 665 CSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSS 724
Query: 385 VVSWNSMIGGYGLNGQME----EAKELFDNMPKRNDVSWSAIISG-YLEHKQFDLVFAVF 439
+ W +++G ++ +E A+ LF+ P +D S S ++S Y + ++ V V
Sbjct: 725 I--WRTILGACRIHRNIEIAERAAERLFELEP--HDASSSILLSNIYADLGRWSDVTRVR 780
Query: 440 NEMLLSG 446
N +L G
Sbjct: 781 NILLDHG 787
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 259/451 (57%), Gaps = 3/451 (0%)
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
IE+ +L R +FD + N V W+ M+ Y+ S PE A L+ QM S N+ F
Sbjct: 55 IELVNLAYTRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFP 114
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+L A ++L A +HAH++K G +V+ +N+L+ +Y+ G + ++F+ + +
Sbjct: 115 FLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTR 174
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D+ VSWN MI GY G ++ A ++F MP++N +SW+ +I G++ ++
Sbjct: 175 DI---VSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQ 231
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+ML++G P+ T S L A A + +LE+GK +H I K D LG LTD Y K G
Sbjct: 232 QMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCG 291
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
++E + VF ++ K +WT ++ GLA G +E+++ F +M+K I PN +T ++L
Sbjct: 292 EMEKALLVFSKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILT 351
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSH+GL ++G F SM +YNIKP+ HY C+VD++ R+G L EA +FI SMP +P++
Sbjct: 352 ACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNA 411
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL+ C+ +K+ ++ + K L +L +H Y+ L++IYA+AG W + VR +
Sbjct: 412 AIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQI 471
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+GL GCS + + VH FF +P
Sbjct: 472 KHRGLLNHPGCSSITLNGVVHEFFAGDGSHP 502
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 196/419 (46%), Gaps = 50/419 (11%)
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQ-----NVISWTAAICGFVQNGFSFEALK 170
RN+++ + L+ + + R+E + R F N + W + + + AL
Sbjct: 40 RNQLTVSTLL---VSYARIELVNLAYTRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALL 96
Query: 171 LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL 230
L+ ++L + V N TF + KAC+ ++ F + I K GF V NSL+ +
Sbjct: 97 LYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYA 156
Query: 231 KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
G + A +F+++ RD+VSW +++D +I+ G+L A +IF MPE+N +SW+ MI
Sbjct: 157 ISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVG 216
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKD 350
+ + G +EA L +QM KP++ S LSA A L AL G +H ++ K I+ D
Sbjct: 217 FVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKID 276
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+ L D+Y KCGE + LVF + +K V +W ++IGG ++G+ EA + F
Sbjct: 277 PVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVC---AWTAIIGGLAIHGKGREALDWFTQ 333
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
M K +G PN TF+++L A + E+G
Sbjct: 334 MQK-------------------------------AGINPNSITFTAILTACSHAGLTEEG 362
Query: 471 KDLHGKIIKLGFPYDVFLGT----ALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMV 524
K L + + Y++ + D ++G ++ +R + MP K N W ++
Sbjct: 363 KSLFESMSSV---YNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALL 418
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 170/395 (43%), Gaps = 75/395 (18%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T LLK ++ + + + +H H+IK G E Y T LL +Y S
Sbjct: 109 NSY--TFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAIS-------- 158
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
GN++ A LF+ +P R+ VSW +I G++K G ++ +
Sbjct: 159 -----------------------GNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMA 195
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F+ P +NVISWT I GFV+ G EAL L ++L +G+KP+ +T S ACA +
Sbjct: 196 YKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGL 255
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
G + I K + + L + +K GE++ A VF ++EK+ V +WT I+
Sbjct: 256 GALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAII 315
Query: 258 DVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSF 312
G EA F +M + N ++++ ++ + +G EE LF M+ Y+
Sbjct: 316 GGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNI 375
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
KP+ + ++DL + G K+ R
Sbjct: 376 KPSMEHYG-----------------------------------CMVDLMGRAGLLKEARE 400
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+S+ K A + W +++ L+ E KE+
Sbjct: 401 FIESMPVKPNAAI--WGALLNACQLHKHFELGKEI 433
>gi|218186152|gb|EEC68579.1| hypothetical protein OsI_36919 [Oryza sativa Indica Group]
Length = 586
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 255/440 (57%), Gaps = 5/440 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLS 324
L +A +FDE P R+ +S ++ + S PE A + R M + + P+ S V S
Sbjct: 30 LPDALHLFDETPRRDIYIYSSLLTAISHSASPELALPILRCMLSADALHPDHFVISSVAS 89
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L++ R G +HAH + D + ++L+D+Y KCG DGR VFDS+ K+
Sbjct: 90 VFARLRSRRLGRQLHAHFVASPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNS-- 147
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
V W +++ GY NG+ EEA +LF +MP RN +W+A+ISG + + +F EM
Sbjct: 148 -VVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRR 206
Query: 445 SG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G I + S V+ ASA +A+ G+ LHG ++LGF ++ +G AL D Y+K DI
Sbjct: 207 DGVRIDDAFVLSIVIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALIDMYSKCSDIL 266
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
S+R VF+ + ++ ISWT MV G A+ G A+E++ L++ M PNE+T + +++ACS
Sbjct: 267 SAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACS 326
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV KG + F SM+ Y I P +HYTC +D+LSRSG L EAE+ + +MP+EPD W
Sbjct: 327 HAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATW 386
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LLS C YK+ ++ R L +L + + Y+LLSN+YA G+W VRK M
Sbjct: 387 GALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGL 446
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
+RK G SW+E + F
Sbjct: 447 EIRKEPGYSWIEAGREFRLF 466
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 194/426 (45%), Gaps = 38/426 (8%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GV 180
AL+S + K + +++ F+ P +++ +++ + + AL + +L + +
Sbjct: 18 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAISHSASPELALPILRCMLSADAL 77
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ SS+ A + RLG + + + V +SL+ + K G D R
Sbjct: 78 HPDHFVISSVASVFARLRSRRLGRQLHAHFVASPYNGDDVVKSSLVDMYCKCGSPDDGRK 137
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VFD M ++ V WT ++ + G EA ++F MP RN +W+ +I+ +G A
Sbjct: 138 VFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGA 197
Query: 301 FRLFRQMTRYSFKPNTS-CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
LF +M R + + + SIV+ A A L A G +H +++G ++ + NALID
Sbjct: 198 VELFVEMRRDGVRIDDAFVLSIVIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALID 257
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+YSKC + R VF+ I +D V+SW +M+ G +G+ EEA
Sbjct: 258 MYSKCSDILSAREVFEGITFRD---VISWTTMVVGEAQHGRAEEA--------------- 299
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII- 478
A+++ M+L+G PN+ TF ++ A + ++KG+ L +
Sbjct: 300 ----------------LALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKN 343
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESI 537
+ G + T D ++SG + + + MP + +E +W ++ + A+ I
Sbjct: 344 EYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCI 403
Query: 538 NLFEEM 543
+ +++
Sbjct: 404 RISDKL 409
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 194/393 (49%), Gaps = 35/393 (8%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ L A+ + NG D VV + +++ + G+ ++ +++FD M +N V WTAL+SG+
Sbjct: 101 RQLHAHFVASPYNGDD-VVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYAS 159
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV-TFSS 189
+GR EE++ F P +N+ +WTA I G V G S A++LF+++ GV+ ++ S
Sbjct: 160 NGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSI 219
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ A A++ F LG + G + GF ++ V N+LI + K ++ AR VF+ + RD
Sbjct: 220 VIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRD 279
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFR 305
V+SWT ++ + G EA ++D M + NEV++ +I + +G ++ +LF
Sbjct: 280 VISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFE 339
Query: 306 QM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYS 362
M Y P ++ L L+ RSG + A L + E D AL+ S
Sbjct: 340 SMKNEYGITPRLQHYTCYLDLLS-----RSGHLLEAEELMTTMPYEPDEATWGALL---S 391
Query: 363 KCGETKDGRL---VFDSIVEKDVAHVVSWNSMIGGYGLNGQ---MEEAKELFDNMPKRND 416
C + KD + + D ++E ++ + Y +NG+ + + ++ + R +
Sbjct: 392 ACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKE 451
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+S I +G ++F L A GE+P
Sbjct: 452 PGYSWIEAG----REFRLFHA--------GEVP 472
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ GR LHG ++ G + L+ MY L A E+ + + D++ M+
Sbjct: 231 VLGRQLHGSAMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGE 290
Query: 98 IQWGNLEEAQRLFDGM----PERNEVSWTALISGFMKHGRVEESMWYFE--RNPF---QN 148
Q G EEA L+D M + NEV++ LI G V++ FE +N +
Sbjct: 291 AQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPR 350
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ +T + ++G EA +L + +P+E T+ ++ AC + D + + +
Sbjct: 351 LQHYTCYLDLLSRSGHLLEAEELMTTM---PYEPDEATWGALLSACTKYKDAEMCIRI 405
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 339/684 (49%), Gaps = 82/684 (11%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
K + + N +I G A GH+ KE + R ++ +++E + I F +V
Sbjct: 125 KTVVTWNAIIAGYAQLGHV------KEAFALFRQMV-----DEAMEPSIIT-----FLIV 168
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ C A ++ G AQ + G + TAL+S ++K G ++ + F+ ++
Sbjct: 169 LDACSSPAGLKLGKEFHAQVIKVGFVSDFRIG-TALVSMYVKGGSMDGARQVFDGLYKRD 227
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V ++ I G+ ++G +A +LF ++ + G KPN ++F SI C+ G +V
Sbjct: 228 VSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHA 287
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
G V V +LI + + G ++
Sbjct: 288 QCMNTGLVDDVRVATALIRMYMGCGSIE-------------------------------G 316
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARR+FD+M R+ VSW+VMI Y ++ E+AF LF M +P+ + +++A AS
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L +H+ V++ G D+ + AL+ +Y+KCG KD
Sbjct: 377 SADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD------------------- 417
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
A+++FD M +R+ VSWSA+I Y+E+ + F F+ M +
Sbjct: 418 ---------------ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVE 462
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ T+ ++L A + +L+ G +++ + IK + +G AL + K G IE +R +
Sbjct: 463 PDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYI 522
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+ M ++ ++W VM+ G + G A+E+++LF+ M K PN +T + VL ACS +G V
Sbjct: 523 FENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFV 582
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G ++F+ + I P Y C+VD+L R+G L EAE IN MP +P+S+ W++LL+
Sbjct: 583 EEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLA 642
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ Y N +AERA + A YV LS++YA+AG W + VRK+M +G+RK
Sbjct: 643 ACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKE 702
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
GC+W+EV ++H F + +P+
Sbjct: 703 QGCTWIEVEGKLHTFVVEDRSHPQ 726
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/559 (25%), Positives = 241/559 (43%), Gaps = 106/559 (18%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
+LF + + I T L +L +S + G+ H +IK G + + T L+ MY
Sbjct: 148 ALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMY 207
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF---------------- 110
+ A ++ L D+ N MI + G+ E+A +LF
Sbjct: 208 VKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFL 267
Query: 111 ---DGMPERNEVSW--------------------TALISGFMKHGRVEESMWYFERNPFQ 147
DG ++W TALI +M G +E + F++ +
Sbjct: 268 SILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVR 327
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+V+SWT I G+ +N +A LF + E G++P+ +T+ I ACA D L +
Sbjct: 328 DVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIH 387
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+ +AGF + V +L+ + K G + AR VFD M +RDVVSW+ ++ ++E
Sbjct: 388 SQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVE----- 442
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+G EEAF F M R + +P+ + +L+A
Sbjct: 443 --------------------------NGCGEEAFETFHLMKRNNVEPDVVTYINLLNACG 476
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L AL GM ++ +K + + + NALI++ K G + R +F+++V++D VV+
Sbjct: 477 HLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRD---VVT 533
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN MIGGY L+G EA +LFD M K ++F
Sbjct: 534 WNVMIGGYSLHGNAREALDLFDRMLK----------------ERFR-------------- 563
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSR 506
PN TF VL A + +E+G+ ++ G + L + D ++G+++ +
Sbjct: 564 -PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAE 622
Query: 507 RVFDRMPDK-NEISWTVMV 524
+ +RMP K N W+ ++
Sbjct: 623 LLINRMPLKPNSSIWSTLL 641
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 207/443 (46%), Gaps = 69/443 (15%)
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
T+ + + C + D LG V I ++G + ++ N+LI L G + AR FD +
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
E + VV+W I+ + ++ G+ +EAF LFR
Sbjct: 123 ENKTVVTWNAIIAGYAQL-------------------------------GHVKEAFALFR 151
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
QM + +P+ F IVL A +S L+ G HA V+K+G D I AL+ +Y K G
Sbjct: 152 QMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGG 211
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
R VFD + ++DV+ ++N MIGGY +G E+A +LF M +
Sbjct: 212 SMDGARQVFDGLYKRDVS---TFNVMIGGYAKSGDGEKAFQLFYRMQQ------------ 256
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
G PN+ +F S+L ++ +L GK +H + + G D
Sbjct: 257 -------------------EGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
V + TAL Y G IE +RRVFD+M ++ +SWTVM+RG AE+ +++ LF M++
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357
Query: 546 TSITPNELTILSVLFACSHSGLVDKGL-KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
I P+ +T + ++ AC+ S D L + +S + T +V M ++ G +
Sbjct: 358 EGIQPDRITYIHIINACASSA--DLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAI 415
Query: 605 SEAEDFINSMPFEPDSNAWASLL 627
+A ++M D +W++++
Sbjct: 416 KDARQVFDAMS-RRDVVSWSAMI 437
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 123/214 (57%), Gaps = 4/214 (1%)
Query: 354 SNALIDLYSKCGETKD---GRLVFDSIVEKDVA-HVVSWNSMIGGYGLNGQMEEAKELFD 409
S + L+ +C +D G+ V D I++ ++ N++I + + G M EA++ FD
Sbjct: 61 SRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFD 120
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
++ + V+W+AII+GY + FA+F +M+ P+ TF VL A +S A L+
Sbjct: 121 SVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKL 180
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
GK+ H ++IK+GF D +GTAL Y K G ++ +R+VFD + ++ ++ VM+ G A+
Sbjct: 181 GKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAK 240
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
SG +++ LF M++ PN ++ LS+L CS
Sbjct: 241 SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 185/421 (43%), Gaps = 73/421 (17%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
L +L ++ + G+A+H + TG+ + + T L+ MY+G A + +
Sbjct: 267 LSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKV 326
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSW------------------- 121
D+V MI + N+E+A LF M E + +++
Sbjct: 327 RDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREI 386
Query: 122 ----------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
TAL+ + K G ++++ F+ ++V+SW+A I +V+NG
Sbjct: 387 HSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCG 446
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
EA + F + + V+P+ VT+ ++ AC + LG+ ++ KA H+ V N+L
Sbjct: 447 EEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNAL 506
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I +++K G ++ AR +F+ M +RDVV+W V
Sbjct: 507 INMNVKHGSIERARYIFENMVQRDVVTWNV------------------------------ 536
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK- 344
MI Y+ G EA LF +M + F+PN+ F VLSA + + G +++L
Sbjct: 537 -MIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDG 595
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
GI + + ++DL + GE + L+ + + K + + W++++ + G ++ A
Sbjct: 596 RGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSI--WSTLLAACRIYGNLDVA 653
Query: 405 K 405
+
Sbjct: 654 E 654
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 318/638 (49%), Gaps = 77/638 (12%)
Query: 74 EANEIVKDLNGFDLVV----HNCMINANIQWGNLEEAQRLFDGMPERNEVS------WTA 123
EA++ +K+++ D+ V + C+ A + +L + + + D + R V
Sbjct: 70 EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRL--RRTVKNPSGSIENC 127
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + G + F+ +N++SW I + +NG +A++LF + SG++PN
Sbjct: 128 LLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ S+ ++C + LG + + +A +++V
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITV---------------------- 225
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
T I ++++ G L A+ +FD M +N V+W+ ++ Y Q+ E A L
Sbjct: 226 ---------ETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALEL 276
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +M + + FSIVL L+ G +H+H++K+G E +V + L+D Y K
Sbjct: 277 FARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVK 336
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
CG+ +E A F + + NDVSWSA+I
Sbjct: 337 CGD----------------------------------IESAYRSFGRISEPNDVSWSALI 362
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
SG+ + + + +F + G + N ++SV A A+ A+L G HG IK G
Sbjct: 363 SGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
++ +A+ Y+K G ++ +RR F+ + + + ++WT ++ G A G A E++ F M
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRM 482
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + PN +T ++VL ACSHSGLV + +Y SM Y +KP HY C++D SR+G
Sbjct: 483 QSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGL 542
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L EA + IN MPFEPD+ +W SLL GC + + ++ + A +NL++L AGY+LL N+
Sbjct: 543 LXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNL 602
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
Y++ G+W +A +VRKLM E+ L+K CSW+ V+ QVH
Sbjct: 603 YSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH 640
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/542 (22%), Positives = 215/542 (39%), Gaps = 106/542 (19%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
CL + + GR +H L +T + + LL MY ++ ++ ++
Sbjct: 92 CLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMK 151
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPER----------------------------- 116
+LV +I+A + G LE+A RLF M
Sbjct: 152 NLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMH 211
Query: 117 ----------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
N TA+ + +++ G +E + F+ QN ++WT + G+ Q
Sbjct: 212 SHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLE 271
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
AL+LF ++ GV+ +E FS + K C + D+ +G + I K G E VSV L+
Sbjct: 272 VALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLV 331
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+K G+++ A F R+ + + VSW+
Sbjct: 332 DFYVKCGDIESAYRSFGRISEPNDVSWS-------------------------------A 360
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
+I+ ++QSG E+ ++F + N+ ++ V A A+ L G H +K G
Sbjct: 361 LISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRG 420
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ ++ +A++ +YSKCG R F+SI E D V+W ++I GY +G EA
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD---AVAWTAIISGYAYHGNAAEA-- 475
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
F M G PN TF +VL A +
Sbjct: 476 -----------------------------LGFFRRMQSYGVRPNAVTFIAVLTACSHSGL 506
Query: 467 LEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+ + K G + + G + + DTY+++G + + + +RMP + + +SW ++
Sbjct: 507 VAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLL 566
Query: 525 RG 526
G
Sbjct: 567 GG 568
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 156/375 (41%), Gaps = 42/375 (11%)
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
++ G +EA ++M + + A L++L G +H + +
Sbjct: 63 SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSG 122
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
I N L+ +Y CG D + VFD ++ K+ +VSW +I Y NG++E+A LF +M
Sbjct: 123 SIENCLLRMYCDCGSXIDVQKVFDEMLMKN---LVSWVIVISAYAKNGELEKAIRLFSDM 179
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
SG PN + + S+L + + LE GK
Sbjct: 180 QA-------------------------------SGIRPNSAVYMSLLQSCLGPSFLELGK 208
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H +I+ ++ + TA+ + Y + G +E ++ VFD M +N ++WT ++ G ++
Sbjct: 209 QMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ ++ LF M + +E VL C D G K +S +
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMG-KQIHSHIVKLGXESEVSVG 327
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
T +VD + G + A + EP+ +W++L+SG + E +K L
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRIS-EPNDVSWSALISG---FSQSGRLEDCIKIFTSLRS 383
Query: 652 EHPAGYVLLSNIYAS 666
E G VL S IY S
Sbjct: 384 E---GVVLNSFIYTS 395
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 187/424 (44%), Gaps = 36/424 (8%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHG-HLIKTGIHKERYLT-TRLLIMY-- 66
I + + N +ET +C N+ ++ L G L+ G+ + +T T L++ Y
Sbjct: 215 IRAQLNANITVETAIC--------NMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQ 266
Query: 67 ---------LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
L +R ++E E+ D F +V+ C + W ++ + +
Sbjct: 267 AKKLEVALELFARMAMEGVEL--DEFVFSIVLKVCCXLED--WDMGKQIHSHIVKLGXES 322
Query: 118 EVS-WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
EVS T L+ ++K G +E + F R N +SW+A I GF Q+G + +K+F L
Sbjct: 323 EVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLR 382
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
GV N ++S+ +ACA + +G G K G ++ ++++T+ K G +D
Sbjct: 383 SEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLD 442
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYN 292
AR F+ +++ D V+WT I+ + G+ EA F M N V++ ++ +
Sbjct: 443 YARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACS 502
Query: 293 QSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
SG EA + M+R Y KP + ++ + L + + + ++ E D
Sbjct: 503 HSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALEL---INRMPFEPDA 559
Query: 352 FISNALI-DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
+L+ ++ C + K G++ +++ D + + Y G+ EEA +
Sbjct: 560 MSWKSLLGGCWAHC-DLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKL 618
Query: 411 MPKR 414
M +R
Sbjct: 619 MAER 622
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 222/727 (30%), Positives = 338/727 (46%), Gaps = 129/727 (17%)
Query: 40 GRALHGHLIKTG--IHKERYLTTRLLIMYLGSRKSLEANEIVKDLN-GF-DLVVHNCMIN 95
GRAL GHL++TG + + + LL +Y A + + G DLV M +
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 96 ANIQWGNLEEAQRLFDGMPER--------------------------------------- 116
+ G EA RLF E
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFW 185
Query: 117 -NEVS-WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
+VS ALI F K+G + F+ + V+ WT I + Q+G+S EA++LFL
Sbjct: 186 GTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLD 245
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+LE+G +P++ T SS+ AC E+ FRLG + L + G E V L+ + K
Sbjct: 246 MLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHN 305
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
L AR +F+ MP+ N ++W+ +++ Y Q
Sbjct: 306 GQ----------------------------SLHNAREVFNRMPKHNVMAWTALLSGYVQR 337
Query: 295 GYPE-EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G + + LF +M +PN +S +L A A+L SG +H H +
Sbjct: 338 GSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHC----------V 387
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+ L DL V N+++ Y +G +EEA+ FD + +
Sbjct: 388 KSNLADLN------------------------VVGNALVSMYAESGSIEEARHAFDQLYE 423
Query: 414 RNDVSWSAIISG------YLEHK--QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
+N VS+S + G Y +++ + +L + F TF S++ A+ASV
Sbjct: 424 KNMVSFSGNLDGDGRSNTYQDYQIERMELGISTF-------------TFGSLISAAASVG 470
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
L KG+ LH +K GF D +G +L Y++ G + + +VFD M D N ISWT M+
Sbjct: 471 MLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMIS 530
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
GLA+ GYA ++ LF +M + PN++T ++VL ACSH+GLV +G ++F M+ + +
Sbjct: 531 GLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLI 590
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
P HY C+VD+L RSG + +A DFIN MP + D+ W +LL CKT+ N I E A +
Sbjct: 591 PRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANH 650
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
+ +L + PA YVLLSN+YA AG W +R LM +K L K G SW+ V N +H F
Sbjct: 651 VIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRA 710
Query: 706 KTDHNPK 712
+P+
Sbjct: 711 GDTSHPQ 717
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 195/456 (42%), Gaps = 86/456 (18%)
Query: 199 DFRLGLSVFGLIFKAG--FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK--RDVVSWT 254
D LG ++ G + + G E V NSL+TL K V ARSVFD M RD+VSWT
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+ G EA R+F E E + + + Q+ + E F L
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHL----------- 170
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLV 373
+G V V K+G DV + ALID+++K G+ R V
Sbjct: 171 -------------------AGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRV 211
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FD + E+ VV W +I Y +G +EA EL
Sbjct: 212 FDGLFERT---VVVWTLLITRYAQSGYSDEAVEL-------------------------- 242
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F +ML +G P++ T SS+L A + S G+ LH ++LG D + L
Sbjct: 243 -----FLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLV 297
Query: 494 DTYAKSGDIES---SRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN-LFEEMEKTSIT 549
D YAKS + +S +R VF+RMP N ++WT ++ G + G + LF +M I
Sbjct: 298 DMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIR 357
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLS 605
PN +T S+L AC++ G D G + + +K N V V M + SG +
Sbjct: 358 PNHITYSSMLKACANLGDQDSGRQIHT-----HCVKSNLADLNVVGNALVSMYAESGSIE 412
Query: 606 EAEDFINSMPFEPDSNAWASLLSG---CKTYKNEQI 638
EA + + +E + +++ L G TY++ QI
Sbjct: 413 EARHAFDQL-YEKNMVSFSGNLDGDGRSNTYQDYQI 447
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 118/290 (40%), Gaps = 72/290 (24%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L+ S ++ +G+ LH +K G +R + L+ MY SR
Sbjct: 462 LISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMY--SR---------------- 503
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G L +A ++FD M + N +SWT++ISG KH
Sbjct: 504 -------------CGYLVDACQVFDEMNDHNVISWTSMISGLAKH--------------- 535
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
G++ AL+LF ++ +GVKPN+VT+ ++ AC+ + G
Sbjct: 536 ----------------GYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEH 579
Query: 207 FGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF---- 260
F ++ K G + ++ L + G V+ A + M + D + W +L
Sbjct: 580 FRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHN 639
Query: 261 -IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
+++G++ I ++ ++ + ++ Y ++G ++ R+ R + R
Sbjct: 640 NMDIGEIAANHVI--QLEPQDPAPYVLLSNLYAEAGLWDQVARI-RSLMR 686
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 289/545 (53%), Gaps = 36/545 (6%)
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
G L L+ LL S +P+ +TF + KACA + + G +V G + GF V V
Sbjct: 100 GLVTRCLPLYCSLLRSA-RPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVV 158
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N+ + + EAR++FD R+ V
Sbjct: 159 NA-------------------------------AMHFLAVCSSMAEARKLFDGSHVRDLV 187
Query: 283 SWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
SW+ +I Y + G P EA +F R + + P+ V+S A L+ L G +H +
Sbjct: 188 SWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGY 247
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
V G+ V + N ++D+Y KCG+ + + VF+ I +K + VSW +MI GY G M
Sbjct: 248 VESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTI---VSWTTMIVGYAQFGLM 304
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
++A+++FD MP+R+ W+A+++GY++ K+ +F++M + P+ T ++L A
Sbjct: 305 DDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSAC 364
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+ + +LE G +H I + V LGT L D Y+K G+IE + RVF +P+KN ++WT
Sbjct: 365 SQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWT 424
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M+ GLA G+A +I F+ M + + P+E+T + VL AC H+GLV +G ++F+ M
Sbjct: 425 AMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSK 484
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
Y+++ +HY+C+VD+L R+G L EAE +N+MP EPD+ W +L C+ + N + E+
Sbjct: 485 YHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEK 544
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A L +L YVLL+N+YA A A VR +M G+ K GCS +E+ VH
Sbjct: 545 AAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVH 604
Query: 702 FFFQK 706
F K
Sbjct: 605 EFIVK 609
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 191/391 (48%), Gaps = 37/391 (9%)
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKAC 194
E+ F+ + ++++SW I G+V+ G EAL++F +++ G V P+EVT +
Sbjct: 173 EARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGS 232
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A++ D LG + G + G V + N ++ + +K G+++ A+SVF+ ++K+ +VSWT
Sbjct: 233 AQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWT 292
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++ + + G + +AR++FDEMPER+ W+ ++ Y Q +EA RLF M +P
Sbjct: 293 TMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEP 352
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ +LSA + L AL GM VH ++ + + V + L+D+YSKCG + VF
Sbjct: 353 DDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVF 412
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
I EK+ ++W +MI SG H D+
Sbjct: 413 KEIPEKN---ALTWTAMI-------------------------------SGLANHGHADV 438
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALT 493
F M+ G P++ TF VL A +++G++ ++ K + + +
Sbjct: 439 AIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMV 498
Query: 494 DTYAKSGDIESSRRVFDRMP-DKNEISWTVM 523
D ++G ++ + + + MP + + + W +
Sbjct: 499 DLLGRAGYLDEAEHLVNTMPMEPDAVVWGAL 529
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 154/345 (44%), Gaps = 65/345 (18%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N +++ I+ G+LE A+ +F+G+ ++ VSWT +I G+ + G ++++ F+ P ++V
Sbjct: 261 NVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVF 320
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
W A + G+VQ EAL+LF + E+ V+P+++T ++ AC+++ +G+ V I
Sbjct: 321 PWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYI 380
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ V + +L+ + K G ++ A VF + +++ ++WT
Sbjct: 381 DRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWT---------------- 424
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
MI+ G+ + A + F++M +P+ F VLSA
Sbjct: 425 ---------------AMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACC--- 466
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
HA ++K G E F S +V +E+ + H ++
Sbjct: 467 --------HAGLVKEGQE---FFS----------------LMVSKYHLERKMKH---YSC 496
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDL 434
M+ G G ++EA+ L + MP D V W A+ H L
Sbjct: 497 MVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITL 541
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 214/675 (31%), Positives = 342/675 (50%), Gaps = 61/675 (9%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLI--MYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
Q R HGHL+ +H Y + LLI L + + + I D V++CM+
Sbjct: 16 QLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAY-VDSIFTSSPSPDASVYSCMLKY 74
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ G + LF N PF V + +
Sbjct: 75 YSRMGAHNQVVSLFKCTHSLN-----------------------LRPQPF--VYIYLIKL 109
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G N F LKL G + ++I A+ L + +F+ E
Sbjct: 110 AGKSGNMFHAYVLKL-------GHIDDHFIRNAILDMYAKNGQVDLARN----LFEQMAE 158
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ ++ NS+I+ K G A +F+ M R++++WT ++ + +MGDL ARR FDEM
Sbjct: 159 RTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEM 218
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
PER+ VSW+ M + Y Q P+EA LF QM P+ + + + +S+ +S+
Sbjct: 219 PERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLAD 278
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+ + + I + F+ AL+D+++K G + R +FD + + A V+WN MI Y
Sbjct: 279 SILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNA--VTWNIMISAYT 336
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFS 455
G++ A+ELFDNMPKR+ VSW+++I+GY ++ + + +F EM+ +I P++ T +
Sbjct: 337 RVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIA 396
Query: 456 SVLCASASVASLEKG----KDLHGKIIKLG---FPYDVFLGTALTDTYAKSGDIESSRRV 508
SVL A + +L+ + K IKLG F +F+ Y+K G + + R+
Sbjct: 397 SVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFM-------YSKCGSVADAHRI 449
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F M ++ +S+ ++ G A +G+ KE+I L ME+ I P+ +T + VL ACSH+GL+
Sbjct: 450 FQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLL 509
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G F S++ P HY C+VD+L R+G L EA+ I SMP +P + + SLL+
Sbjct: 510 NEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLN 564
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
+ +K + E A L++L ++ YVLLSNIYAS GRW D VR++M + GL+KS
Sbjct: 565 ASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKS 624
Query: 689 GGCSWVEVRNQVHFF 703
G SWVE + QVH F
Sbjct: 625 VGMSWVEYKGQVHKF 639
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/642 (30%), Positives = 328/642 (51%), Gaps = 53/642 (8%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
EA + ++ + V +N MI Q G+ E LFD MPER+ S+ +I+G MK G
Sbjct: 59 EAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIFSYNTMIAGLMKFGD 118
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ + F++ PF++V+SW + I G+V NG EAL++F
Sbjct: 119 INGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFS-------------------- 158
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
G++ K V N +I + +G+VDLA F M RD+ SW
Sbjct: 159 --------------GMVLK-----DVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASW 199
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T ++ G + EAR +F++MP R+ +W+ MIA Y ++G E LF++M + F+
Sbjct: 200 TTMISGLASAGRIVEARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFR 259
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
++ +++ L + ++ M + + +K N+++ + G K+
Sbjct: 260 S----WNEMINGLVRNQRIQDAMRLFVEMP----QKCRRSWNSIVFGLIRNGLIKEAHAF 311
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
+ + + VSW ++I GY G+++ A +F+ MP R+ +W+ II G E+ +
Sbjct: 312 LE---KSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGE 368
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F +M G P+++TF+SVL + + +L G+ +H ++ K GF Y V + A+
Sbjct: 369 EGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMV 428
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
YA+ G+ S+ +F M + ISW ++ GLA +G E+I +FE+M I PN +
Sbjct: 429 TLYARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDIKPNHI 488
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T + VL ACSH+GLVD+G YF+ M+ ++P HYTC+VD+L R G + EA F+
Sbjct: 489 TFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFLRQ 548
Query: 614 MP---FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
M E ++ W ++L C+ +KN Q+ E A + + ++ + Y++L+ +Y S+G+
Sbjct: 549 MEANGVEVPASVWGAVLGACRIHKNMQVGEIAGERILEIEPHNSGVYIILAEMYLSSGKR 608
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
DA V M EKG++K CSW+EV H F +P+
Sbjct: 609 EDAERVWVRMREKGVKKQPACSWMEVNGSGHVFLSGDSSHPQ 650
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 188/404 (46%), Gaps = 61/404 (15%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
NS I+ ++ G + A+ +FD M +R+ V++ ++ + + G GE +FDEMPER+
Sbjct: 45 NSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIF 104
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR--SGMHVHA 340
S++ MIA + G A +F++M S S +S +ALR SGM
Sbjct: 105 SYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGM---- 160
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ KDV N +I G+ F + +D+A SW +MI G G+
Sbjct: 161 ------VLKDVVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIA---SWTTMISGLASAGR 211
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM----------LLSG---- 446
+ EA+ LF++MP R+ +W+ +I+GY+E+ ++ +F +M +++G
Sbjct: 212 IVEARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRN 271
Query: 447 -----------EIPNKSTFSSVLCASASVASLEKG--KDLHGKIIKLGFPYDVFLGTALT 493
E+P K S S + G K+ H + K F D T L
Sbjct: 272 QRIQDAMRLFVEMPQKCRRS---WNSIVFGLIRNGLIKEAHAFLEKSPFS-DTVSWTNLI 327
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
Y ++G+++++ +F+ MP ++ +W V++ GL E+ + +E + F +M++ P+E
Sbjct: 328 VGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEA 387
Query: 554 TILSVLFACS-----------HSGLVDKGLKYF----NSMEPIY 582
T SVL CS H+ + G YF N+M +Y
Sbjct: 388 TFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLY 431
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 117/523 (22%), Positives = 219/523 (41%), Gaps = 95/523 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERY--LTTR------LLIMYLGSR-KSLEANE 77
+LKD+ S NLVI G G K + +E + + TR +I L S + +EA
Sbjct: 161 VLKDVVSWNLVIAGLVGVG---KVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARG 217
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+ +D+ D+ N MI I+ G +E + LF MP+R+ SW +I+G +++ R++++
Sbjct: 218 LFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQDA 277
Query: 138 M-------------W------------------YFERNPFQNVISWTAAICGFVQNG--- 163
M W + E++PF + +SWT I G+ + G
Sbjct: 278 MRLFVEMPQKCRRSWNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVD 337
Query: 164 -----FSF-----------------------EALKLFLKLLESGVKPNEVTFSSICKACA 195
F E LK F+K+ E G P+E TF+S+ C+
Sbjct: 338 TAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICS 397
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
++ LG + + K GF V+V N+++TL + G + A +F M D +SW
Sbjct: 398 DLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSHDFISWNS 457
Query: 256 ILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RY 310
I+ G+ EA +F++M + N +++ +++ + +G ++ F M +
Sbjct: 458 IICGLAHNGNGVEAIEVFEKMRSIDIKPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKC 517
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+P ++ ++ L + M + G+E + A++ + G
Sbjct: 518 CLEPTIEHYTCIVDLLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNMQVG 577
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM-----PKRNDVSWSAI--- 422
+ + I+E + + + + Y +G+ E+A+ ++ M K+ SW +
Sbjct: 578 EIAGERILEIEPHNSGVYIILAEMYLSSGKREDAERVWVRMREKGVKKQPACSWMEVNGS 637
Query: 423 ----ISGYLEHKQFDLVFAVFNEMLLSGEI----PNKSTFSSV 457
+SG H QF V V + + EI N ++F +
Sbjct: 638 GHVFLSGDSSHPQFSRVCGVLGLLHMEMEIGILKSNAASFQEI 680
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 201/677 (29%), Positives = 332/677 (49%), Gaps = 105/677 (15%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL T + +GR LHGH+I G + L +L+ Y + F+
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY----------------SAFN 149
Query: 87 LVV--HNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
L+V H N+NI +
Sbjct: 150 LLVDAHVITENSNI--------------------------------------------LH 165
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
PF W I +V+NGF +AL + ++++ G++P+ T+ S+ KAC E D G
Sbjct: 166 PF----PWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGK 221
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V I + + + V N+LI++ K G+V +AR +FD++ +RD VSW ++ V+ MG
Sbjct: 222 EVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMG 281
Query: 265 DLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
EA +F M E N + W+ + Y ++G + A L QM + ++
Sbjct: 282 MWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALI 341
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
I L A + + + G +H+ ++ + + NALI +YS+C + K L+F
Sbjct: 342 IGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLF------ 395
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
Q+ EAK L ++W++IISG + + +
Sbjct: 396 -------------------QLMEAKSL---------ITWNSIISGCCHMDRSEEASFLLR 427
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKS 499
EMLL G PN T +SVL A VA+L+ GK+ H + + F + L AL D YA+S
Sbjct: 428 EMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARS 487
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G + +RRVFD + +++++++T M+ G G + ++ LFEEM I P+ +T+++VL
Sbjct: 488 GKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVL 547
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
ACSHSGLV +G F M +Y + P+ H+ C+ D+ R+G L++A++ I +MP++P
Sbjct: 548 SACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPT 607
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
WA+L+ C+ ++N +I E A + L ++ E+P YVL++N+YA+AG W VR
Sbjct: 608 PAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIF 667
Query: 680 MTEKGLRKSGGCSWVEV 696
M + G+RK+ GC+WV+V
Sbjct: 668 MRDLGVRKAPGCAWVDV 684
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 317/605 (52%), Gaps = 54/605 (8%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G + EA++ FD + + SW +++SG+ +G E+ F+ P +N++SW + G++
Sbjct: 31 GQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYI 90
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG-LIFKAGFEKHV 219
+N EA +F + E V V+++++ K + G+ V L+F E++
Sbjct: 91 KNRMIEEARNVFEIMPERNV----VSWTAMVKGYVQ-----EGMVVEAELLFWRMPERNE 141
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+ + G +D AR ++D M +DVV+ T ++ G + EAR IFDEM ER
Sbjct: 142 VSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRER 201
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N ++W+ MI Y Q+ + A +LF M K S S++L
Sbjct: 202 NVITWTTMITGYGQNKRVDVARKLFEVMPE---KTEVSWTSMLLG--------------- 243
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
Y+ G +D F+ + K V ++ N+MI G G
Sbjct: 244 ---------------------YTLSGRIEDAEEFFEVMPMKPV---IACNAMIVALGEVG 279
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLSGEIPNKSTFSSVL 458
++ +A+ +FD M R++ +W +I Y E K F+L +F +M G P+ + S+L
Sbjct: 280 EIVKARRVFDQMEDRDNATWRGMIKAY-ERKGFELEALELFAQMQRQGVRPSFPSLISIL 338
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A++ASL+ G+ +H +++ F DV++ + L Y K G++ ++ VFDR P K+ I
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDII 398
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W ++ G A G +E++ +F EM + PN++T++++L ACS+ G +++GL+ F SM
Sbjct: 399 MWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESM 458
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
E + + P HY+C VDML R+G++ +A + INSM +PD+ W +LL CKT+ +
Sbjct: 459 ESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDL 518
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
AE A K L+++ E+ Y+LLS+I AS +W D +RK M K + K GCSW+EV
Sbjct: 519 AEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGK 578
Query: 699 QVHFF 703
+VH F
Sbjct: 579 KVHMF 583
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 214/439 (48%), Gaps = 73/439 (16%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + EA ++ ++ ++V N +++ I+ +EEA+ +F+ MPERN VSWTA++
Sbjct: 58 YFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMV 117
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G+++ G V E+ F R P +N +SWT G + G +A KL+ + V +
Sbjct: 118 KGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTN 177
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+C+ +++ R IF E++V ++IT + VD+AR +F+ M
Sbjct: 178 MIGGLCRE-GRVDEAR-------EIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVM 229
Query: 246 EKRDVVSWTVIL----------------------------DVFIEMGDLGE---ARRIFD 274
++ VSWT +L + + +G++GE ARR+FD
Sbjct: 230 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFD 289
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+M +R+ +W MI Y + G+ EA LF QM R +P+ +LS A+L +L+
Sbjct: 290 QMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQY 349
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VHAH+++ + DV++++ L+ +Y KCGE +LVFD KD ++ WNS+I G
Sbjct: 350 GRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKD---IIMWNSIISG 406
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y +G EEA VF+EM LSG +PNK T
Sbjct: 407 YASHGLGEEA-------------------------------LKVFHEMPLSGTMPNKVTL 435
Query: 455 SSVLCASASVASLEKGKDL 473
++L A + LE+G ++
Sbjct: 436 IAILTACSYGGKLEEGLEI 454
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 148/321 (46%), Gaps = 39/321 (12%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
EA EI ++ +++ MI Q ++ A++LF+ MPE+ EVSWT+++ G+ GR
Sbjct: 190 EAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGR 249
Query: 134 VEESMWYFERNPFQNVI-------------------------------SWTAAICGFVQN 162
+E++ +FE P + VI +W I + +
Sbjct: 250 IEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERK 309
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
GF EAL+LF ++ GV+P+ + SI CA + + G V + + F+ V V
Sbjct: 310 GFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVA 369
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----E 278
+ L+T+ +K GE+ A+ VFDR +D++ W I+ + G EA ++F EMP
Sbjct: 370 SVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTM 429
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMH 337
N+V+ ++ + G EE +F M +++ P +S + L + M
Sbjct: 430 PNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAME 489
Query: 338 VHAHVLKIGIEKDVFISNALI 358
+ + + I+ D + AL+
Sbjct: 490 L---INSMTIKPDATVWGALL 507
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 216/787 (27%), Positives = 374/787 (47%), Gaps = 143/787 (18%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
+ Y+E LL+ + +G+ +H HL++TG + ++L L+ MY + A
Sbjct: 39 HGYVELYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARA 98
Query: 78 IVKDLNGFDLVV-HNCMINA---NIQWGN-LEEAQRLFDGMPERNEVSW----------- 121
++ V +N M++A N W LE R+ + PE +++++
Sbjct: 99 AFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVG 158
Query: 122 --------------------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
AL++ + K G VEE+ F+ ++ +SWT+
Sbjct: 159 SLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSM 218
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR-------------- 201
I + NGF EAL L+ ++ G++P+ +TF+S AC ++ D +
Sbjct: 219 ISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSNMESD 278
Query: 202 -LGLSVFGLIFKAG--------FEK----HVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
+G ++ + + G FEK HV SL+T ++ A ++ RM+
Sbjct: 279 FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHE 338
Query: 249 DV--------------------------------------VSWTVILDVFIEMGDLGEAR 270
V V T +L ++ + G+L AR
Sbjct: 339 GVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAAR 398
Query: 271 RIFDEMPE-RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F+ + + RN W+ MI+ Y Q+G+ +EA L+ QM +PN FS VL+A +S
Sbjct: 399 AVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSS 458
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L +GM +H HV + +V + NAL+ +Y+KCG
Sbjct: 459 GDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGS----------------------- 495
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+E AK F+ +++ VSW+A+I Y +H ++ M G +P
Sbjct: 496 -----------LELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLP 544
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRV 508
++ T +S L A A SL+ G+++H +++K F + + TAL + Y + G +E++R +
Sbjct: 545 DEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSM 604
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+ M ++ +SWT M A+ G+A + ++L+ EM I PNE+T S+L CSH+GL+
Sbjct: 605 FEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLL 664
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+G++ F M+ + + P H+ C+VD+L RSGRL +AE + SMP++PDS AW ++L
Sbjct: 665 ARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLG 724
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
CKT+ + A+RA + + +L E+ + Y LLS+I+ +AG +A+ V+ M E GL+K
Sbjct: 725 SCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKP 784
Query: 689 GGCSWVE 695
G S +E
Sbjct: 785 PGQSLIE 791
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 265/476 (55%), Gaps = 36/476 (7%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ + E G L AR++FD++P N W V+ + G+ EEA F +M + +PN
Sbjct: 68 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 127
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+L A L R+G ++H +LK E D +I +ALI +YSKCG + VFD
Sbjct: 128 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 187
Query: 376 SIVEKDVA--------------------------------HVVSWNSMIGGYGLNGQMEE 403
IV+KD+ +VVSWN++I G+ G
Sbjct: 188 WIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 247
Query: 404 AKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
E+F M + + VSW+++ISG++++ F F EML G P+ T SS+L
Sbjct: 248 VSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLP 307
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A +VA+L GK++HG + +G DV++ +AL D YAK G I ++ +F MP++N ++
Sbjct: 308 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 367
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W ++ G A GY E+I LF +ME++ + LT +VL ACSH+G+V+ G F M+
Sbjct: 368 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQ 427
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y I+P HY C+VD+L R+G+LSEA D I +MP EPD W +LL C+ + N ++A
Sbjct: 428 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 487
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
E A ++L++L E P +LLSN+YA AGRW +A ++K+M ++ K GCSW+E
Sbjct: 488 EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 543
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/557 (23%), Positives = 234/557 (42%), Gaps = 116/557 (20%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R +I+ +F S +T + + +GRALH HL+ G+ + Y +L+
Sbjct: 12 RVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSF 71
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + G L A++LFD +P
Sbjct: 72 Y-------------------------------TECGQLSNARKLFDKIPN---------- 90
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
N+ W + GF EAL F ++ + G++PN+
Sbjct: 91 ---------------------TNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQF 129
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
SI KAC ++D R G ++ +I K FE + ++LI + K G V+ A VFD +
Sbjct: 130 VLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI 189
Query: 246 EKRD-----------------------------------VVSWTVILDVFIEMGDLGEAR 270
+D VVSW ++ F ++GD
Sbjct: 190 VDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVS 249
Query: 271 RIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+F M E + VSW+ +I+ + Q+ + E F F++M F P++ S +L A
Sbjct: 250 EVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPAC 309
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++ LR G +H + + IG+EKDV++ +AL+D+Y+KCG + +++F + E++ V
Sbjct: 310 TNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERN---TV 366
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+WNS+I GY +G EA ELF+ M K + ++++A+++ +L ++F +M
Sbjct: 367 TWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKM 426
Query: 443 LLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
I P ++ ++ L + DL I + D F+ AL G+
Sbjct: 427 QEKYRIEPRLEHYACMVDLLGRAGKLSEAYDL---IKAMPVEPDKFVWGALLGACRNHGN 483
Query: 502 IE----SSRRVFDRMPD 514
IE ++ +F+ P+
Sbjct: 484 IELAEVAAEHLFELEPE 500
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 156/341 (45%), Gaps = 43/341 (12%)
Query: 301 FRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
+R++R + T +F+ ++ ++ + A +AL G +HAH++ IG+ + + + L+
Sbjct: 11 YRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMS 70
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
Y++CG+ + R +FD I ++ W + G G EEA
Sbjct: 71 FYTECGQLSNARKLFDKIPNTNIRR---WIVLTGACARRGFYEEA--------------- 112
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+ F+EM G PN+ S+L A ++ G+++H I+K
Sbjct: 113 ----------------LSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK 156
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
F D ++ +AL Y+K G +E + RVFD + DK+ + MV G A+ G+ E++NL
Sbjct: 157 NSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNL 216
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGL--KYFNSMEPIYNIKPNGRHYTCVVDM 597
++M++ + PN ++ +++ S G DK + + F M ++P+ +T V+
Sbjct: 217 VQKMQQAGVKPNVVSWNTLIAGFSQVG--DKSMVSEVFRLMTA-NGVEPDVVSWTSVISG 273
Query: 598 LSRSGRLSEAEDFINSM---PFEPDSNAWASLLSGCKTYKN 635
++ E D M F P S +SLL C N
Sbjct: 274 FVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVAN 314
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 209/744 (28%), Positives = 371/744 (49%), Gaps = 117/744 (15%)
Query: 11 INPET-SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
++P+ +F S I+ C L D +LV + +++ G + Y+ L+ MY S
Sbjct: 102 VSPDKYTFPSVIKACAGLF-DAEMGDLV------YKQILEMGFESDLYVGNALVDMY--S 152
Query: 70 RKSL--EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PERNEVSW 121
R L A ++ ++ DLV N +I+ G EEA ++ + P+ VS
Sbjct: 153 RMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSS 212
Query: 122 T---------------------------------ALISGFMKHGRVEESMWYFERNPFQN 148
L++ ++K R ++ F+ ++
Sbjct: 213 VLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRD 272
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+++ ICG+++ E++K+FL+ L+ KP+ +T +S+ AC + D L ++
Sbjct: 273 SVTYNTMICGYLKLEMVEESVKMFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAKYIYN 331
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ +AGF +V N +++DV+ + GD+
Sbjct: 332 YMLRAGFVLESTVKN-------------------------------ILIDVYAKCGDMIT 360
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +F+ M ++ VSW+ +I+ Y QSG EA +LF+ M + + + +++S
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTR 420
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L L+ G +H++ +K GI D+ +SNALID+Y+KCGE V DS+
Sbjct: 421 LADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGE------VGDSL----------- 463
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++F++M + V+W+ +IS + F V +M + +
Sbjct: 464 -----------------KIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVV 506
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ +TF L AS+A+ GK++H +++ G+ ++ +G AL + Y+K G +ESS RV
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRV 566
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+RM ++ ++WT M+ G ++++ F +MEK+ I P+ + +++++ACSHSGLV
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLV 626
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+KGL F M+ Y I P HY CVVD+LSRS ++S+AE+FI +MP EPD++ WAS+L
Sbjct: 627 EKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLR 686
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+T + + AER + + +L + P +L SN YA+ +W +RK + +K ++K+
Sbjct: 687 ACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKN 746
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
G SW+E+ +VH F D P+
Sbjct: 747 PGYSWIEIGKKVHVFCSGDDSAPQ 770
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 234/500 (46%), Gaps = 79/500 (15%)
Query: 137 SMWYFER-NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
S+ F R +P +NV W + I F +NG+ +AL+ + KL ES V P++ TF S+ KACA
Sbjct: 58 SLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACA 117
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ D +G V+ I + GFE + V N+L+ + +MG + AR VFD M RD+VSW
Sbjct: 118 GLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSW-- 175
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+ +I+ Y+ GY EEA ++ ++ P+
Sbjct: 176 -----------------------------NSLISGYSSHGYYEEALEIYHELRNSWIVPD 206
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ S VL A A+L ++ G +H LK G+ ++N L+ +Y K D R VFD
Sbjct: 207 SFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFD 266
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH-KQFDL 434
+V +D V++N+MI GY +EE+ ++F LE+ QF
Sbjct: 267 EMVVRD---SVTYNTMICGYLKLEMVEESVKMF------------------LENLDQFK- 304
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
P+ T +SVLCA + L K ++ +++ GF + + L D
Sbjct: 305 --------------PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILID 350
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK GD+ ++R VF+ M K+ +SW ++ G +SG E++ LF+ M + +T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 555 ILSVLFACSHSGLVD----KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
L ++ + L D KGL IY + ++DM ++ G + ++
Sbjct: 411 YLMLISLSTR--LADLKFGKGLHSNGIKSGIY---IDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 611 INSMPFEPDSNAWASLLSGC 630
NSM D+ W +++S C
Sbjct: 466 FNSMG-TLDTVTWNTVISAC 484
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 36/259 (13%)
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+ +++ S LS+ ++L LR +HA V+ +G++ F S LID YS
Sbjct: 4 RVSSAFISRALSSSSNLNELR---RIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLS 60
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
VF + P +N W++II + ++ F
Sbjct: 61 VFRRVS---------------------------------PAKNVYIWNSIIRAFSKNGWF 87
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+ ++ S P+K TF SV+ A A + E G ++ +I+++GF D+++G AL
Sbjct: 88 PKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNAL 147
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D Y++ G + +R+VFD MP ++ +SW ++ G + GY +E++ ++ E+ + I P+
Sbjct: 148 VDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDS 207
Query: 553 LTILSVLFACSHSGLVDKG 571
T+ SVL A ++ +V +G
Sbjct: 208 FTVSSVLPAFANLLVVKQG 226
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 270/495 (54%), Gaps = 41/495 (8%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD-----VFIEMGDLGEARRIFDEMP 277
+SLIT + +D AR++ + +V LD ++ + G + +ARR+FD MP
Sbjct: 68 HSLITACARYRSLDDARAIHAHLAGSQFAG-SVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
R+ SW+ +IA Y Q+ P+EA L M R FKPN F+ +L A + + G
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA +K DV++ +AL+D+Y++CG
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCG-------------------------------- 214
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+M+ A +FD + +N VSW+A+I+G+ + +F EM +G T+SSV
Sbjct: 215 --RMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSV 272
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
A A + +LE+GK +H +IK G F+G + D YAKSG + +R+VFDR+ K+
Sbjct: 273 FSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDV 332
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
++W M+ A+ G +E++ FEEM K + N++T LS+L ACSH GLV +G +YF+
Sbjct: 333 VTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDM 392
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M+ YN++P HY VVD+L R+G L++A FI MP +P + W +LL C+ +KN +
Sbjct: 393 MKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 451
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVR 697
I + A ++++L + VLL NIYAS G+W A VRK+M G++K CSWVE+
Sbjct: 452 IGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIE 511
Query: 698 NQVHFFFQKTDHNPK 712
N VH F D +P+
Sbjct: 512 NSVHMFVANDDTHPR 526
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 160/346 (46%), Gaps = 47/346 (13%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI + K G V ++ F+ P +++ SWT+ I G+ QN EAL L +L KP
Sbjct: 104 SLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKP 163
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N TF+S+ KA +G + L K + V V ++L
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSAL----------------- 206
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
LD++ G + A +FD++ +N VSW+ +IA + + G E
Sbjct: 207 --------------LDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F +M R F+ +S V SA+A + AL G VHAH++K G F+ N ++D+Y+
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVS 418
K G D R VFD + +KD VV+WNSM+ + G EA F+ M K N ++
Sbjct: 313 KSGSMIDARKVFDRVDKKD---VVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369
Query: 419 WSAIISG------YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
+ +I++ E KQ+ F + E L EI + T +L
Sbjct: 370 FLSILTACSHGGLVKEGKQY---FDMMKEYNLEPEIDHYVTVVDLL 412
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 154/385 (40%), Gaps = 46/385 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
RA+H HL + +L L+ +Y +A + + D+ +I Q
Sbjct: 83 ARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQ 142
Query: 100 WGNLEEAQRLFDGMPERN--------------------------------EVSW------ 121
+EA L GM + W
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202
Query: 122 -TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+AL+ + + GR++ ++ F++ +N +SW A I GF + G L +F ++ +G
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ T+SS+ A A I G V + K+G V N+++ + K G + AR
Sbjct: 263 EATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARK 322
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGY 296
VFDR++K+DVV+W +L F + G EA F+EM + N++++ ++ + G
Sbjct: 323 VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL 382
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+E + F M Y+ +P + V+ L L + + K+ ++ + A
Sbjct: 383 VKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDAL---VFIFKMPMKPTAAVWGA 439
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKD 381
L+ K G+ D + E D
Sbjct: 440 LLGSCRMHKNAKIGQFAADHVFELD 464
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ S++ A A SL+ + +H + F VFL +L Y K G + +RRVFD MP
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++ SWT ++ G A++ E++ L M + PN T S+L A S G +
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG-E 185
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+++ Y+ + + ++DM +R GR+ A + + + +W +L++G
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIAG 240
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ +H H+IK+G ++ +L MY S ++A ++ ++ D+V N M+ A
Sbjct: 284 QGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFA 343
Query: 99 QWGNLEEAQRLFDGMPE----RNEVSWTALISGFMKHGRVEESMWYF----ERNPFQNVI 150
Q+G EA F+ M + N++++ ++++ G V+E YF E N +
Sbjct: 344 QYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEID 403
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+ + + G +AL K+ +KP + ++ +C + ++G
Sbjct: 404 HYVTVVDLLGRAGLLNDALVFIFKM---PMKPTAAVWGALLGSCRMHKNAKIG 453
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 270/495 (54%), Gaps = 41/495 (8%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD-----VFIEMGDLGEARRIFDEMP 277
+SLIT + +D AR++ + +V LD ++ + G + +ARR+FD MP
Sbjct: 68 HSLITACARYRSLDDARAIHAHLAGSQFAG-SVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
R+ SW+ +IA Y Q+ P+EA L M R FKPN F+ +L A + + G
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA +K DV++ +AL+D+Y++CG
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCG-------------------------------- 214
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+M+ A +FD + +N VSW+A+I+G+ + +F EM +G T+SSV
Sbjct: 215 --RMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSV 272
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
A A + +LE+GK +H +IK G F+G + D YAKSG + +R+VFDR+ K+
Sbjct: 273 FSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDV 332
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
++W M+ A+ G +E++ FEEM K + N++T LS+L ACSH GLV +G +YF+
Sbjct: 333 VTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDM 392
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M+ YN++P HY VVD+L R+G L++A FI MP +P + W +LL C+ +KN +
Sbjct: 393 MKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK 451
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVR 697
I + A ++++L + VLL NIYAS G+W A VRK+M G++K CSWVE+
Sbjct: 452 IGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIE 511
Query: 698 NQVHFFFQKTDHNPK 712
N VH F D +P+
Sbjct: 512 NSVHMFVANDDTHPR 526
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 160/346 (46%), Gaps = 47/346 (13%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI + K G V ++ F+ P +++ SWT+ I G+ QN EAL L +L KP
Sbjct: 104 SLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKP 163
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N TF+S+ KA +G + L K + V V ++L
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSAL----------------- 206
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
LD++ G + A +FD++ +N VSW+ +IA + + G E
Sbjct: 207 --------------LDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F +M R F+ +S V SA+A + AL G VHAH++K G F+ N ++D+Y+
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 312
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVS 418
K G D R VFD + +KD VV+WNSM+ + G EA F+ M K N ++
Sbjct: 313 KSGSMIDARKVFDRVDKKD---VVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQIT 369
Query: 419 WSAIISG------YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
+ +I++ E KQ+ F + E L EI + T +L
Sbjct: 370 FLSILTACSHGGLVKEGKQY---FDMMKEYNLEPEIDHYVTVVDLL 412
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 7/264 (2%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+AL+ + + GR++ ++ F++ +N +SW A I GF + G L +F ++ +G +
Sbjct: 204 SALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 263
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
T+SS+ A A I G V + K+G V N+++ + K G + AR V
Sbjct: 264 ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKV 323
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYP 297
FDR++K+DVV+W +L F + G EA F+EM + N++++ ++ + G
Sbjct: 324 FDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLV 383
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+E + F M Y+ +P + V+ L L + + K+ ++ + AL
Sbjct: 384 KEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDAL---VFIFKMPMKPTAAVWGAL 440
Query: 358 IDLYSKCGETKDGRLVFDSIVEKD 381
+ K G+ D + E D
Sbjct: 441 LGSCRMHKNAKIGQFAADHVFELD 464
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ S++ A A SL+ + +H + F VFL +L Y K G + +RRVFD MP
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++ SWT ++ G A++ E++ L M + PN T S+L A S G +
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIG-E 185
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+++ Y+ + + ++DM +R GR+ A + + + +W +L++G
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNALIAG 240
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG+ +H H+IK+G ++ +L MY S ++A ++ ++ D+V N M+ A
Sbjct: 284 QGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFA 343
Query: 99 QWGNLEEAQRLFDGMPE----RNEVSWTALISGFMKHGRVEESMWYF----ERNPFQNVI 150
Q+G EA F+ M + N++++ ++++ G V+E YF E N +
Sbjct: 344 QYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEID 403
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+ + + G +AL K+ +KP + ++ +C + ++G
Sbjct: 404 HYVTVVDLLGRAGLLNDALVFIFKM---PMKPTAAVWGALLGSCRMHKNAKIG 453
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 314/614 (51%), Gaps = 88/614 (14%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL++ + K GRV++S FE ++++SW I F Q+ EAL F ++ GV+
Sbjct: 236 ALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVEL 295
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ VT +S+ AC+ + +G + + + N LI S
Sbjct: 296 DGVTIASVLPACSHLERLDVGKEIHAYVLRN---------NDLIENSF------------ 334
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ ++D++ + RR+FD + R W+ MI+ Y ++G E+A
Sbjct: 335 ---------VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALI 385
Query: 303 LFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF +M + + PNT+ + V+ A +A + +H + +K+G ++D ++ NAL+D+Y
Sbjct: 386 LFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMY 445
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
S+ G +M+ ++ +FD+M R+ VSW+
Sbjct: 446 SRMG----------------------------------KMDISETIFDSMEVRDRVSWNT 471
Query: 422 IISGYLEHKQFDLVFAVFNEM----------------LLSGEI-PNKSTFSSVLCASASV 464
+I+GY+ ++ + +EM G PN T +VL A++
Sbjct: 472 MITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAAL 531
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
A++ KGK++H I+ D+ +G+AL D YAK G + SRRVF+ MP+KN I+W V++
Sbjct: 532 AAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLI 591
Query: 525 RGLAESGYAKESINLFEEMEKTS-----ITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
G +E++ LF+ M + PNE+T ++V ACSHSGL+ +GL F M+
Sbjct: 592 MACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMK 651
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS-NAWASLLSGCKTYKNEQI 638
+ ++P HY CVVD+L R+G+L EA + +N+MP E D AW+SLL C+ ++N ++
Sbjct: 652 HDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVEL 711
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E A KNL L + YVLLSNIY+SAG W AM VRK M + G++K GCSW+E R+
Sbjct: 712 GEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRD 771
Query: 699 QVHFFFQKTDHNPK 712
+VH F +P+
Sbjct: 772 EVHKFMAGDVSHPQ 785
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 140/581 (24%), Positives = 252/581 (43%), Gaps = 119/581 (20%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ V N ++N + G + + ++FD + +R++VSW + I+ + FE+
Sbjct: 128 VTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR----------FEK--- 174
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI---NDFRLG 203
W +AL+ F + ++ + T S+ AC+ + + RLG
Sbjct: 175 -----WE-------------QALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLG 216
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ G + G +K + N+L+ + K+G VD ++++F+ RD+VSW
Sbjct: 217 KQLHGYSLRVGDQKTFTN-NALMAMYAKLGRVDDSKALFESFVDRDMVSW---------- 265
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
+ MI+ ++QS EA FR M + + + VL
Sbjct: 266 ---------------------NTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVL 304
Query: 324 SALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
A + L+ L G +HA+VL+ + ++ F+ +AL+D+Y C + + GR VFD I+ + +
Sbjct: 305 PACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRI 364
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
WN+MI GY NG E+A LF M K
Sbjct: 365 E---LWNAMISGYARNGLDEKALILFIEMIK----------------------------- 392
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
++G +PN +T +SV+ A + + +HG +KLGF D ++ AL D Y++ G +
Sbjct: 393 -VAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKM 451
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT------------- 549
+ S +FD M ++ +SW M+ G SG ++ L EM++ T
Sbjct: 452 DISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKG 511
Query: 550 ----PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
PN +T+++VL C+ + KG K ++ + + + +VDM ++ G L+
Sbjct: 512 GPYKPNAITLMTVLPGCAALAAIAKG-KEIHAYAIRNMLASDITVGSALVDMYAKCGCLN 570
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
+ N MP + W L+ C + + A KN+
Sbjct: 571 LSRRVFNEMP-NKNVITWNVLIMACGMHGKGEEALELFKNM 610
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 230/500 (46%), Gaps = 90/500 (18%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+P ++ SW A+ ++ EA+ ++++ SG +P+ F ++ KA + + D + G
Sbjct: 52 SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 204 LSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
+ K G+ V+V N+L+ +++ +
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLV-------------------------------NMYGK 140
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
G +G+ ++FD + +R++VSW+ IA + E+A FR M + + S F++V
Sbjct: 141 CGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENME--LSSFTLV 198
Query: 323 LSALAS-----LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
ALA + LR G +H + L++G +K F +NAL+ +Y+K G D
Sbjct: 199 SVALACSNLGVMHGLRLGKQLHGYSLRVGDQK-TFTNNALMAMYAKLGRVDD-------- 249
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+K LF++ R+ VSW+ +IS + + +F A
Sbjct: 250 --------------------------SKALFESFVDRDMVSWNTMISSFSQSDRFSEALA 283
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTY 496
F M+L G + T +SVL A + + L+ GK++H +++ + F+G+AL D Y
Sbjct: 284 FFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMY 343
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTI 555
+ES RRVFD + + W M+ G A +G ++++ LF EM K + + PN T+
Sbjct: 344 CNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTM 403
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIY------NIKPNGRHYTCVVDMLSRSGRLSEAED 609
SV+ AC H + F++ E I+ K + ++DM SR G++ +E
Sbjct: 404 ASVMPACVHC-------EAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456
Query: 610 FINSMPFEPDSNAWASLLSG 629
+SM D +W ++++G
Sbjct: 457 IFDSMEVR-DRVSWNTMITG 475
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 186/413 (45%), Gaps = 59/413 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ LHG+ ++ G K + L+ MY + ++ + + D+V N MI++ Q
Sbjct: 216 GKQLHGYSLRVGDQKT-FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQ 274
Query: 100 WGNLEEAQRLF----------DGMP-----------ER-------------------NEV 119
EA F DG+ ER N
Sbjct: 275 SDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSF 334
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-S 178
+AL+ + +VE F+ + + W A I G+ +NG +AL LF+++++ +
Sbjct: 335 VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVA 394
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G+ PN T +S+ AC F S+ G K GF++ V N+L+ + +MG++D++
Sbjct: 395 GLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDIS 454
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
++FD ME RD VSW ++ ++ G A + EM ++ G P
Sbjct: 455 ETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGP- 513
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+KPN VL A+L A+ G +HA+ ++ + D+ + +AL+
Sbjct: 514 -------------YKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALV 560
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
D+Y+KCG R VF+ + K+ V++WN +I G++G+ EEA ELF NM
Sbjct: 561 DMYAKCGCLNLSRRVFNEMPNKN---VITWNVLIMACGMHGKGEEALELFKNM 610
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 138/347 (39%), Gaps = 73/347 (21%)
Query: 42 ALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWG 101
++HG+ +K G ++RY+ L+ MY K + I + D V N MI + G
Sbjct: 421 SIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSG 480
Query: 102 N-------LEEAQRLFD-------------GMPER-NEVSW------------------- 121
L E QR+ + G P + N ++
Sbjct: 481 RYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEI 540
Query: 122 ----------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
+AL+ + K G + S F P +NVI+W I +G
Sbjct: 541 HAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKG 600
Query: 166 FEALKLFLKLL-ESG----VKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHV 219
EAL+LF ++ E+G KPNEVTF ++ AC+ GL++F + G E
Sbjct: 601 EEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTS 660
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRM--EKRDVVSWTVILDVF-----IEMGDLGEARRI 272
++ L + G+++ A + + M E V +W+ +L +E+G++ A+ +
Sbjct: 661 DHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVA-AKNL 719
Query: 273 FDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
P N S V+++ Y+ +G +A + + M + K C
Sbjct: 720 LHLEP--NVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGC 764
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 214/675 (31%), Positives = 342/675 (50%), Gaps = 61/675 (9%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLI--MYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
Q R HGHL+ +H Y + LLI L + + + I D V++CM+
Sbjct: 16 QLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAY-VDSIFTSSPSPDASVYSCMLKY 74
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ G + LF N PF V + +
Sbjct: 75 YSRMGAHNQVVSLFKCTHSLN-----------------------LRPQPF--VYIYLIKL 109
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G N F LKL G + ++I A+ L + +F+ E
Sbjct: 110 AGKSGNLFHAYVLKL-------GHIDDHFIRNAILDMYAKNGQVDLARN----LFEQMAE 158
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ ++ NS+I+ K G A +F+ M R++++WT ++ + +MGDL ARR FDEM
Sbjct: 159 RTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEM 218
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
PER+ VSW+ M + Y Q P+EA LF QM P+ + + + +S+ +S+
Sbjct: 219 PERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLAD 278
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+ + + I + F+ AL+D+++K G + R +FD + + A V+WN MI Y
Sbjct: 279 SILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNA--VTWNIMISAYT 336
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFS 455
G++ A+ELFDNMPKR+ VSW+++I+GY ++ + + +F EM+ +I P++ T +
Sbjct: 337 RVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIA 396
Query: 456 SVLCASASVASLEKG----KDLHGKIIKLG---FPYDVFLGTALTDTYAKSGDIESSRRV 508
SVL A + +L+ + K IKLG F +F+ Y+K G + + R+
Sbjct: 397 SVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFM-------YSKCGSVADAHRI 449
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F M ++ +S+ ++ G A +G+ KE+I L ME+ I P+ +T + VL ACSH+GL+
Sbjct: 450 FQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLL 509
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G F S++ P HY C+VD+L R+G L EA+ I SMP +P + + SLL+
Sbjct: 510 NEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLN 564
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
+ +K + E A L++L ++ YVLLSNIYAS GRW D VR++M + GL+KS
Sbjct: 565 ASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKS 624
Query: 689 GGCSWVEVRNQVHFF 703
G SWVE + QVH F
Sbjct: 625 VGMSWVEYKGQVHKF 639
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 252/449 (56%), Gaps = 36/449 (8%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
LG+ARR+ DEMPERN VSW+ MI+ Y+Q GY EA LF +M PN F+ VL++
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
S + G +H+ V+K E +F+ ++L+D+Y+K
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKA--------------------- 159
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
G++ EA+ +FD +P+R+ VS +AIISGY + + +F +
Sbjct: 160 -------------GKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 206
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G N T++SVL A + +A+L+ G+ +H +++ P+ V L +L D Y+K G + S
Sbjct: 207 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 266
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSH 564
RR+FD MP++ ISW M+ G ++ G +E++ LF+ M E+ + P+ +T L+VL CSH
Sbjct: 267 RRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSH 326
Query: 565 SGLVDKGLKYFNSM-EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
G+ D+GL+ F M +P HY CVVD+ R+GR+ EA +FI MPFEP + W
Sbjct: 327 GGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIW 386
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
SLL C+ ++N I E + L ++ E+ YV+LSN+YASAGRW D VR+LM EK
Sbjct: 387 GSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEK 446
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ K G SW+E+ +H F +P+
Sbjct: 447 AVIKEPGRSWIELDQTLHTFHASDRSHPR 475
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 222/489 (45%), Gaps = 128/489 (26%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L + SQ + +G+ +H H+IKT YL TRL+++Y R
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR---------------- 59
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
C L +A+R+ D MPERN VSWTA+ISG+
Sbjct: 60 -----C----------LGDARRVLDEMPERNVVSWTAMISGYS----------------- 87
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
Q G++ EAL LF+++L SG PNE TF+++ +C + F+LG +
Sbjct: 88 --------------QRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 133
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
L+ K FE H+ V +SL+ + K G++ AR VFD + +RDVVS T I
Sbjct: 134 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI---------- 183
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
I+ Y Q G EEA LFR++ R + N ++ VL+AL
Sbjct: 184 ---------------------ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 222
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+ L AL G VH+HVL+ + V + N+LID+YSKCG R +FDS+ E+ V+
Sbjct: 223 SGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERT---VI 279
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWN+M+ GY +G EA ELF M + N V
Sbjct: 280 SWNAMLVGYSKHGLGREAVELFKLMKEENKVK---------------------------- 311
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKII--KLGFPYDVFLGTALTDTYAKSGDIES 504
P+ TF +VL + ++G ++ +++ K GF ++ + D + ++G +E
Sbjct: 312 --PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369
Query: 505 SRRVFDRMP 513
+ +MP
Sbjct: 370 AFEFIKKMP 378
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 5/199 (2%)
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ SVL S ++ +G+ +H +IK + V+L T L Y K + +RRV D MP
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++N +SWT M+ G ++ GYA E+++LF EM + PNE T +VL +C+ S G +
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLG-R 131
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+S+ + + + + ++DM +++G++ EA + +P E D + +++SG Y
Sbjct: 132 QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP-ERDVVSCTAIISG---Y 187
Query: 634 KNEQIAERAVKNLWKLAEE 652
+ E A+ +L E
Sbjct: 188 AQLGLDEEALDLFRRLQRE 206
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 156/401 (38%), Gaps = 114/401 (28%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L TS + GR +H +IKT ++ + LL MY +
Sbjct: 117 VLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKA----------------- 159
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G + EA+R+FDG+PER+ VS TA+ISG
Sbjct: 160 --------------GKICEARRVFDGLPERDVVSCTAIISG------------------- 186
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ Q G EAL LF +L G++ N VT++S+ A + + G V
Sbjct: 187 ------------YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQV 234
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ +A +V + NSLI + K G + +R +FD M +R V+SW +L + + G
Sbjct: 235 HSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLG 294
Query: 267 GEARRIFDEMPERNEVS------------------------------------------W 284
EA +F M E N+V +
Sbjct: 295 REAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHY 354
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
++ + ++G EEAF ++M F+P + + +L A + + G V +L+
Sbjct: 355 GCVVDLFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLE 411
Query: 345 IGIEKD---VFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
I E V +SN LY+ G D R V + + EK V
Sbjct: 412 IESENAGNYVILSN----LYASAGRWDDVRTVRELMKEKAV 448
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 258/444 (58%), Gaps = 3/444 (0%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A+ IF + W+ + + + P +A LF ++ + P+ S VL A +
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L +R+G VH +V K+G++ ++F+ N ++ LY+ CGE R VFD + ++DV ++W
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV---ITW 182
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N MI G E A +LF MP+RN SW+++I GY + + +F EM +G +
Sbjct: 183 NIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLL 242
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN+ T +VL A A + +L G+ +H + G+ ++ + L D Y K G +E + R+
Sbjct: 243 PNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRI 302
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M ++ +SW+ M+ GLA G A++++ LF +M T + PN +T + +L ACSH G+V
Sbjct: 303 FDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMV 362
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+KG KYF SM Y I P HY C+VD+ SR+G L EA +FI +MP P+ W +LL
Sbjct: 363 EKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLG 422
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
GCK +KN ++AE A ++L KL + YV+LSNIYA AGRW D VRKLM ++G++K+
Sbjct: 423 GCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKT 482
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
G S + V V+ F D +P+
Sbjct: 483 PGWSSIMVEGVVYNFVAGDDTHPQ 506
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 194/399 (48%), Gaps = 40/399 (10%)
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V W + F + +A+ LF +L E + P+ T S + KAC+ + D R G V G
Sbjct: 78 VTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHG 137
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ K G + ++ + N ++ L GE+ +AR VFD+M +RDV++W +++ ++MGD
Sbjct: 138 YVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEG 197
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++F EMPERN SW+ MI Y Q G +EA LF +M PN VL A A
Sbjct: 198 AYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACAD 257
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ L G +H + G EK++ + N LID+Y KCG +D +FD++ E+ VVSW
Sbjct: 258 MGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERT---VVSW 314
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++MI G +G+ E+A A+FN+M+ +G
Sbjct: 315 SAMIAGLAAHGRAEDA-------------------------------LALFNKMINTGVK 343
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRR 507
PN TF +L A + + +EKG+ + + G + + D ++++G ++ +
Sbjct: 344 PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHE 403
Query: 508 VFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
MP N + W ++ G ++I L EE +
Sbjct: 404 FIMNMPIAPNGVVWGALLGGCK----VHKNIKLAEEATR 438
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 211/471 (44%), Gaps = 78/471 (16%)
Query: 9 FSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLG 68
F I+P+ TC +LK + V G+ +HG++ K G+ +L ++ +Y
Sbjct: 107 FDISPDHY------TCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLY-- 158
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
G + A+++FD MP+R+ ++W +I+
Sbjct: 159 -----------------------------ALCGEIGVARKVFDKMPQRDVITWNIMIARL 189
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
+K G E + F P +NV SWT+ I G+ Q G S EA+ LFL++ ++G+ PNEVT
Sbjct: 190 VKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVV 249
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
++ ACA++ + LG + ++G+EK++ VCN+LI + +K G ++ A +FD ME+R
Sbjct: 250 AVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEER 309
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
VVSW S MIA G E+A LF +M
Sbjct: 310 TVVSW-------------------------------SAMIAGLAAHGRAEDALALFNKMI 338
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGET 367
KPN F +L A + + + G A + + GI + ++DL+S+ G
Sbjct: 339 NTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLL 398
Query: 368 KDGRLVFDSIVEKDVA-HVVSWNSMIGGYGLNGQM---EEAKELFDNMPKRNDVSWSAII 423
++ + I+ +A + V W +++GG ++ + EEA + ND + +
Sbjct: 399 QEAH---EFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLS 455
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ Y E +++ V V M G + +SS++ V + G D H
Sbjct: 456 NIYAEAGRWEDVARVRKLMRDRG-VKKTPGWSSIM-VEGVVYNFVAGDDTH 504
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 87/215 (40%), Gaps = 5/215 (2%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K LH ++K P + + A + ++ +F + W +R AE
Sbjct: 32 KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
++I+LF + + I+P+ T VL ACS V G +E + ++ N
Sbjct: 92 DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKL-GLQSNMFL 150
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
+V + + G + A + MP + D W +++ + AE A K ++
Sbjct: 151 QNMIVHLYALCGEIGVARKVFDKMP-QRDVITWNIMIARLVKMGD---AEGAYKLFAEMP 206
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
E + + + YA G+ +A+++ M + GL
Sbjct: 207 ERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGL 241
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 298/573 (52%), Gaps = 35/573 (6%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G V + F + P +V+ W I G+ + E ++L+L +L+ GV P+ TF +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 192 KACA-EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
+ G + + K G ++ V N+L+ + G +D+AR VFDR K DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
S W++MI+ YN+ EE+ L +M R
Sbjct: 202 FS-------------------------------WNLMISGYNRMKEYEESIELLVEMERN 230
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P + +VLSA + +K VH +V + E + + NAL++ Y+ CGE
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIA 290
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+F S+ +DV +SW S++ GY G ++ A+ FD MP R+ +SW+ +I GYL
Sbjct: 291 VRIFRSMKARDV---ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
F+ +F EM +G IP++ T SVL A A + SLE G+ + I K DV +G
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D Y K G E +++VF M +++ +WT MV GLA +G +E+I +F +M+ SI P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+++T L VL AC+HSG+VD+ K+F M + I+P+ HY C+VDML R+G + EA +
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
+ MP P+S W +LL + + +E +AE A K + +L ++ A Y LL NIYA RW
Sbjct: 528 LRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRW 587
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
D VR+ + + ++K+ G S +EV H F
Sbjct: 588 KDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 171/324 (52%), Gaps = 7/324 (2%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+ + G ++ + F+R ++V SW I G+ + E+++L +++ + V P
Sbjct: 175 ALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSP 234
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
VT + AC+++ D L V + + E + + N+L+ GE+D+A +F
Sbjct: 235 TSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIF 294
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
M+ RDV+SWT I+ ++E G+L AR FD+MP R+ +SW++MI Y ++G E+
Sbjct: 295 RSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLE 354
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+FR+M P+ VL+A A L +L G + ++ K I+ DV + NALID+Y
Sbjct: 355 IFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVS 418
KCG ++ + VF + ++D +W +M+ G NGQ +EA ++F M + +D++
Sbjct: 415 KCGCSEKAQKVFHDMDQRD---KFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 419 WSAIISGYLEHKQFDLVFAVFNEM 442
+ ++S D F +M
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKM 495
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 158/297 (53%), Gaps = 18/297 (6%)
Query: 29 KDITSQNLVIQG---RALHGHLIKTGIHKERYL---TTRLLIMYLGSRKSLEANEIVKDL 82
+D+ S NL+I G + I+ + ER L T+ L++ L + ++ ++ K +
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 83 NGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ + L + N ++NA G ++ A R+F M R+ +SWT+++ G+++ G +
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ + YF++ P ++ ISWT I G+++ G E+L++F ++ +G+ P+E T S+ AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A + +G + I K + V V N+LI + K G + A+ VF M++RD +WT
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 255 VILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
++ G EA ++F +M + +++++ +++ N SG ++A + F +M
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
>gi|302775720|ref|XP_002971277.1| hypothetical protein SELMODRAFT_94780 [Selaginella moellendorffii]
gi|300161259|gb|EFJ27875.1| hypothetical protein SELMODRAFT_94780 [Selaginella moellendorffii]
Length = 650
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 324/649 (49%), Gaps = 73/649 (11%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
+T L++ T V +GR +H H+ K G L LL+ G
Sbjct: 51 DTYAVLIRQCTLARAVPEGRRVHAHISKHGCRDSFLLN--LLVQMFG------------- 95
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
++G + +A R+FD +P RN SW +++ F ++G ++++ F
Sbjct: 96 -----------------RFGCVADASRVFDSIPARNCYSWNIMVAAFAQNGHLQQARITF 138
Query: 142 ERNPF--QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
++ P ++VISWTA I QNG + A++LF + G++ + +TF S+ AC+ +
Sbjct: 139 DQMPPSDRSVISWTALITAHSQNGAAATAIQLFALMDLDGIRADTITFVSVIDACSSLRR 198
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
G++V ++G E H +V +L ++ K ++ ++ +FDRME
Sbjct: 199 IDHGIAVHVEARESGTEMHYAVATALASMYGKCRRLERSKEMFDRME------------- 245
Query: 260 FIEMGDLGEARRIFDEMPERN--EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
ERN VSW MIA YNQSG P +A +F M +P+
Sbjct: 246 ------------------ERNMVTVSWGTMIAAYNQSGDPAKALEVFDAMEGDGIRPDKC 287
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR--LVFD 375
F L A +L L G +H + +E+++ ++N LI +Y KCG ++ R +VFD
Sbjct: 288 VFVSALEACGALGDLAEGRKIHRRIATARMEENLIVANGLIAMYGKCGGVEEARAVVVFD 347
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ +D+A +WN+MI GY G + A+ELFD MP+RN +SW+ +IS Y
Sbjct: 348 LLPLRDLA---AWNAMITGYAQFGHSDPARELFDQMPERNVISWTGMISAYAYSGHRREA 404
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F M L G+ PNK T+ L A A + + + +H K I+ G+ D + L +
Sbjct: 405 HYLFKAMDLLGQRPNKITYLKALEACAGGITAAEARTIHAKAIESGYSSDTQVAVGLLNL 464
Query: 496 YAKSGDIESSRRVFDRMPD-KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
+ K G + + RVFD + + K ++W++M+ A+SG S+ LF EM ++ + P E+T
Sbjct: 465 FEKCGSLAIAERVFDDLGERKTVVAWSIMISAYAQSGRPWRSLELFTEMVQSGVMPTEIT 524
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
++++L ACSH G + +F SM Y + P +Y C+VD+L R+G+L A++ + +M
Sbjct: 525 VVNLLSACSHGGFLYHSWLFFVSMVGDYGLSPILDNYVCLVDILGRTGQLLLAQELLEAM 584
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
P+EP+ AW SLLS CKT + + L +H Y L+ N+
Sbjct: 585 PYEPNDIAWTSLLSSCKTQGDGGRGASVGDQVMDLCPKHSGPYRLVWNV 633
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 265/476 (55%), Gaps = 36/476 (7%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ + E G L AR++FD++P N W V+ + G+ EEA F +M + +PN
Sbjct: 844 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 903
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+L A L R+G ++H +LK E D +I +ALI +YSKCG + VFD
Sbjct: 904 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 963
Query: 376 SIVEKDVA--------------------------------HVVSWNSMIGGYGLNGQMEE 403
IV+KD+ +VVSWN++I G+ G
Sbjct: 964 WIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 1023
Query: 404 AKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
E+F M + + VSW+++ISG++++ F F EML G P+ T SS+L
Sbjct: 1024 VSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLP 1083
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A +VA+L GK++HG + +G DV++ +AL D YAK G I ++ +F MP++N ++
Sbjct: 1084 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 1143
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W ++ G A GY E+I LF +ME++ + LT +VL ACSH+G+V+ G F M+
Sbjct: 1144 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQ 1203
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y I+P HY C+VD+L R+G+LSEA D I +MP EPD W +LL C+ + N ++A
Sbjct: 1204 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 1263
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
E A ++L++L E P +LLSN+YA AGRW +A ++K+M ++ K GCSW+E
Sbjct: 1264 EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/598 (28%), Positives = 301/598 (50%), Gaps = 68/598 (11%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
+E T+LI + K G V+ ++ +++ + + I + +NGF +A ++F+++
Sbjct: 147 DEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIG 206
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
G +PN T+S++ C I+ + G + + K + +V N+L+TL K G ++
Sbjct: 207 NMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMME 266
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
EA +F+ + +RN +SW+ I + Q G
Sbjct: 267 -------------------------------EAEIVFESLRQRNIISWTASINGFYQHGD 295
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
++A + F M +PN FSIVL++ +K FI
Sbjct: 296 FKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKD--------------------FI--- 332
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAH-VVSWNSMIGGYGLNGQMEEAKELFDNMPKR- 414
DGR+ +++K +A V ++I Y G+M+EA++ F M +
Sbjct: 333 ------------DGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAA 380
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
++VSW+A+I+GY+ +++ + F M+ N+ T+S++ A +S SL +H
Sbjct: 381 SNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIH 440
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
++IK ++ + ++L + Y + G +E++ +VF ++ D + +SW +++ +++G
Sbjct: 441 SRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPW 500
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
++I L +M + P T L+VL ACSHSGLV +G ++F SM Y+I+P H +C+
Sbjct: 501 KAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCM 560
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+L R+G+L A DFI + +P ++ W LL+ C+ N Q+AE + + L
Sbjct: 561 VDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDA 620
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YV LSN+YA GRW DA N R+LM +K + K GCSW+EV N+++ FF +P+
Sbjct: 621 TVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPE 678
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 236/557 (42%), Gaps = 116/557 (20%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R +I+ +F S +T + + +GRALH HL+ G+ + Y +L+
Sbjct: 788 RVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSF 847
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + G L A++LFD +P
Sbjct: 848 Y-------------------------------TECGQLSNARKLFDKIPN---------- 866
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
N+ W + GF EAL F ++ + G++PN+
Sbjct: 867 ---------------------TNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQF 905
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD-- 243
SI KAC ++D R G ++ +I K FE + ++LI + K G V+ A VFD
Sbjct: 906 VLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI 965
Query: 244 -----------------------------RME----KRDVVSWTVILDVFIEMGDLGEAR 270
+M+ K +VVSW ++ F ++GD
Sbjct: 966 VDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVS 1025
Query: 271 RIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+F M E + VSW+ +I+ + Q+ + E F F++M F P++ S +L A
Sbjct: 1026 EVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPAC 1085
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++ LR G +H + + IG+EKDV++ +AL+D+Y+KCG + +++F + E++ V
Sbjct: 1086 TNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERN---TV 1142
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+WNS+I GY +G EA ELF+ M K + ++++A+++ +L ++F +M
Sbjct: 1143 TWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKM 1202
Query: 443 LLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
I P ++ ++ L + DL I + D F+ AL G+
Sbjct: 1203 QEKYRIEPRLEHYACMVDLLGRAGKLSEAYDL---IKAMPVEPDKFVWGALLGACRNHGN 1259
Query: 502 IE----SSRRVFDRMPD 514
IE ++ +F+ P+
Sbjct: 1260 IELAEVAAEHLFELEPE 1276
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 131/593 (22%), Positives = 237/593 (39%), Gaps = 138/593 (23%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL-----IMYLGSRKSLEANE 77
TC CL+ +Q + + G Y + +L I + K L A+
Sbjct: 181 TCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH- 239
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
+VK + V N ++ + G +EEA+ +F+ + +RN +SWTA I+GF +HG +
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK-- 297
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
+ALK F + ESG++PNE TFS + +C +
Sbjct: 298 -----------------------------KALKQFSMMRESGIEPNEFTFSIVLASCGCV 328
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
DF G + K G V V ++I + +GE+D A F +M +
Sbjct: 329 KDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGR---------- 378
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ VSW+ +IA Y + E+A F +M + N
Sbjct: 379 --------------------AASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEF 418
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+S + A +S +L + + +H+ ++K +E ++ ++++LI+ Y++CG ++ VF I
Sbjct: 419 TYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQI 478
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
+ D VVSWNS+I Y NG W AI
Sbjct: 479 SDAD---VVSWNSIIKAYSQNGD-----------------PWKAIF-------------- 504
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+ +M+ G P TF +VL A + +++G++ +++
Sbjct: 505 LLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQ------------------ 546
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
D E + MV L +G + +++ ++K ++ P
Sbjct: 547 ------------DYSIQPEETHCSCMVDILGRAGQLENALDF---IKKLTMKPTASIWRP 591
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPN-GRHYTCVVDMLSRSGRLSEAED 609
+L AC ++ + +Y E I +++PN Y + +M + GR ++AE+
Sbjct: 592 LLAACRYNSNLQMA-EYV--AEKILDLEPNDATVYVTLSNMYAEVGRWADAEN 641
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 201/483 (41%), Gaps = 82/483 (16%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFK 313
V LD + M + + P + +I R N +R++R + T +F+
Sbjct: 748 VCLDCYSTMKYISRITDRYIPTPLAAAAAMQSLINRAN-------VYRVYRNISTHRTFQ 800
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
++ ++ + A +AL G +HAH++ IG+ + + + L+ Y++CG+ + R +
Sbjct: 801 SSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKL 860
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FD I ++ W + G G EEA
Sbjct: 861 FDKIPNTNIRR---WIVLTGACARRGFYEEA----------------------------- 888
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+ F+EM G PN+ S+L A ++ G+++H I+K F D ++ +AL
Sbjct: 889 --LSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALI 946
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
Y+K G +E + RVFD + DK+ + MV G A+ G+ E++BL ++M++ + PN +
Sbjct: 947 YMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVV 1006
Query: 554 TILSVLFACSHSGLVDKGL--KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+ +++ S G DK + + F M ++P+ +T V+ ++ E D
Sbjct: 1007 SWNTLIAGFSQVG--DKSMVSEVFRLMTA-NGVEPDVVSWTSVISGFVQNFHNHEGFDAF 1063
Query: 612 NSM---PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL--------- 659
M F P S +SLL C V NL E H V+
Sbjct: 1064 KEMLDQGFCPSSVTISSLLPACTN----------VANLRHGKEIHGYAMVIGVEKDVYVR 1113
Query: 660 --LSNIYASAGRWIDAMNVRKLMTEK----------GLRKSGGCS-WVEVRNQVHFFFQK 706
L ++YA G +A + +M E+ G G C+ +E+ NQ+ K
Sbjct: 1114 SALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTK 1173
Query: 707 TDH 709
DH
Sbjct: 1174 LDH 1176
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 108/236 (45%), Gaps = 11/236 (4%)
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS-AIISGYLEHKQFDLVFAVF---NE 441
+S +++GG+ + A LF+ PKR VS + + SG + + + A F NE
Sbjct: 44 MSKGNVVGGWV---DLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNE 100
Query: 442 ---MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ G P++ S L +E G+ H ++K+G D F+ T+L D YAK
Sbjct: 101 TPHVEFGGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAK 160
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G+++S+ RV+D+M + + ++ A +G+ ++ +F ++ PN T ++
Sbjct: 161 CGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTM 220
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
L C + +G + + + + ++ + S+ G + EAE S+
Sbjct: 221 LAVCGTISAIQEGKQLHAHVVKMQYLSETAVG-NALLTLYSKCGMMEEAEIVFESL 275
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 174/595 (29%), Positives = 313/595 (52%), Gaps = 39/595 (6%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVK 181
+L+S +++ G++E++ + F ++++SW A I G+ NG +AL+LF + + +K
Sbjct: 287 SLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIK 346
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ VT S+ ACA +++ ++ + G I + G + SV N+L++ K A
Sbjct: 347 PDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQ 406
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
F + ++D++SW ILD + +SG
Sbjct: 407 TFLMISRKDLISWNAILDA-------------------------------FTESGCETHL 435
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI---EKDVFISNAL 357
L M R +P++ ++ A++ ++ H++ ++ G+ + + N +
Sbjct: 436 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGM 495
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D Y+KCG K +F S+ EK +VV+ NSMI GY + ++A +F+ M + +
Sbjct: 496 LDAYAKCGNMKYAVNIFGSLSEKR--NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLT 553
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+W+ ++ Y E+ D ++F+E+ G P+ T S+L A A +AS+ + HG +
Sbjct: 554 TWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYV 613
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
I+ F DV L A D Y+K G + + ++F P K+ + +T MV G A G +E++
Sbjct: 614 IRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEAL 672
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
+F M + + P+ + I +VLFACSH+GLVD+G K FNS+E ++ +P Y CVVD+
Sbjct: 673 RIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDL 732
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+R GR+ +A F+ MP E ++N W +LL C+T+ ++ +L+K+ ++ Y
Sbjct: 733 LARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNY 792
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
V++SN+YA+ RW M +R+LM + L+K GCSW+EV + + F +P+
Sbjct: 793 VVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQ 847
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 213/475 (44%), Gaps = 104/475 (21%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
++N + G L+ +LF M +R+ V W ++SG
Sbjct: 80 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSG------------------------- 114
Query: 153 TAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ GF E ++LF + + + KPN VT + + CA + + G SV +
Sbjct: 115 ---LAGF--QSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVI 168
Query: 212 KAGFEKHVSVCNSLITLSLKMGEV-DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K+G E H N+LI++ K G V A + F+R+E +DVVS
Sbjct: 169 KSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVS------------------ 210
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
W+ +IA ++++ + EEAF+LF M + +PN + + +L ASL+
Sbjct: 211 -------------WNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 257
Query: 331 ---ALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
R G VH HVL+ + + +DV + N+L+ Y + G
Sbjct: 258 ENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIG--------------------- 296
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LS 445
QME+A+ LF NM R+ VSW+AII+GY + ++ +F+E + L
Sbjct: 297 -------------QMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLE 343
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIES 504
P+ T SVL A A V +L+ K +HG II+ G D +G AL YAK ++
Sbjct: 344 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 403
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
+ + F + K+ ISW ++ ESG +NL M + I P+ +TIL+++
Sbjct: 404 ALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTII 458
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 187/408 (45%), Gaps = 76/408 (18%)
Query: 167 EALKLFLKLLES--GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
EAL LFL+ + G KPN +++ K+C I+ R G + G K G S+C
Sbjct: 20 EALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKG 79
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ L K G +D ++F EM +R+ V W
Sbjct: 80 LLNLYAKSGALDYCN-------------------------------KLFGEMDQRDPVIW 108
Query: 285 SVMIARYNQ-SGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+++++ + E RLFR M + KPN+ +IVL A L+ +G VH++V
Sbjct: 109 NIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYV 167
Query: 343 LKIGIEKDVFISNALIDLYSKCG-ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+K G+E NALI +Y+KCG D F+ I KDV
Sbjct: 168 IKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDV------------------- 208
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
VSW+A+I+G+ E+K + F +F+ ML PN +T +S+L
Sbjct: 209 ---------------VSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVC 253
Query: 462 ASV---ASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
AS+ A GK++H +++ + DV + +L Y + G +E + +F M ++
Sbjct: 254 ASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDL 313
Query: 518 ISWTVMVRGLAESGYAKESINLFEE-MEKTSITPNELTILSVLFACSH 564
+SW ++ G A +G +++ LF E + +I P+ +T++SVL AC+H
Sbjct: 314 VSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAH 361
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 187/419 (44%), Gaps = 42/419 (10%)
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
G+ E V AL+S + K + ++ F +++ISW A + F ++G + L
Sbjct: 380 GLREDTSVG-NALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNL 438
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF---EKHVSVCNSLITL 228
+L G++P+ +T +I + A ++ + + G + ++ N ++
Sbjct: 439 LHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDA 498
Query: 229 SLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
K G + A ++F + EKR+VV+ ++ ++ +A IF+ M E + +W++M
Sbjct: 499 YAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLM 558
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
+ Y ++ +P++A LF ++ KP+ +L A A + ++ H +V++
Sbjct: 559 VRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR-AC 617
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV ++ A ID+YSKCG +F S +KD +V + +M+GG+ ++G EEA
Sbjct: 618 FNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKD---LVMFTAMVGGFAMHGMGEEA--- 671
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
+F+ ML G P+ ++VL A + +
Sbjct: 672 ----------------------------LRIFSYMLELGVKPDHVIITAVLFACSHAGLV 703
Query: 468 EKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
++G + I K+ GF + + D A+ G I+ + RMP + N W ++
Sbjct: 704 DEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLL 762
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 40/271 (14%)
Query: 298 EEAFRLFRQMTRYS--FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
+EA LF + R S +KPN + +L + ++ A+R G +H + LK+G +
Sbjct: 19 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCK 78
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
L++LY+K +G ++ +LF M +R+
Sbjct: 79 GLLNLYAK----------------------------------SGALDYCNKLFGEMDQRD 104
Query: 416 DVSWSAIISGYLEHKQFDL-VFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDL 473
V W+ ++SG + + V +F M + E PN T + VL A + + GK +
Sbjct: 105 PVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSV 163
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIES-SRRVFDRMPDKNEISWTVMVRGLAESGY 532
H +IK G G AL YAK G + S + F+R+ K+ +SW ++ G +E+ +
Sbjct: 164 HSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKF 223
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACS 563
+E+ LF M K I PN TI S+L C+
Sbjct: 224 TEEAFKLFHAMLKGPIQPNYATIASILPVCA 254
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 168/370 (45%), Gaps = 22/370 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPE-RNEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
N M++A + GN++ A +F + E RN V+ ++ISG++ +++ F ++
Sbjct: 493 NGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDL 552
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+W + + +N F +AL LF +L G+KP+ VT SI ACA + + G
Sbjct: 553 TTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGY 612
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ +A F V + + I + K G V A +F ++D+V +T ++ F G EA
Sbjct: 613 VIRACFND-VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEA 671
Query: 270 RRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLS 324
RIF M E + V + ++ + +G +E +++F + + + F+P ++ V+
Sbjct: 672 LRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVD 731
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
LA ++ + V ++ IE + I L+ E + GR+V D + + + +
Sbjct: 732 LLARGGRIKDA---YTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDN 788
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSW-------SAIISGYLEHKQF 432
+ ++ M Y + + + E+ M R SW + I+G H Q
Sbjct: 789 IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQR 848
Query: 433 DLVFAVFNEM 442
+++ + +
Sbjct: 849 SIIYRTLSTL 858
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN +++L + +++++ G LHG +KLG L L + YAKSG ++
Sbjct: 34 GYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYC 93
Query: 506 RRVFDRMPDKNEISWTVMVRGLAE-SGYAKESINLFEEMEKTS-ITPNELTILSVLFACS 563
++F M ++ + W +++ GLA + E + LF M + PN +TI VL C+
Sbjct: 94 NKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA 153
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYT----CVVDMLSRSGRL-SEAEDFINSMPFEP 618
L + K +S Y IK +T ++ M ++ G + S+A N + F+
Sbjct: 154 R--LREDAGKSVHS----YVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFK- 206
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
D +W ++++G + + E A K
Sbjct: 207 DVVSWNAVIAG---FSENKFTEEAFK 229
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ ++ I+ + G++ A +LF P+++ V +TA++ GF HG E
Sbjct: 620 DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGE---------- 669
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
EAL++F +LE GVKP+ V +++ AC+ G
Sbjct: 670 ---------------------EALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWK 708
Query: 206 VFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+F I K GF+ + ++ L + G + A + RM
Sbjct: 709 IFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRM 749
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 197/672 (29%), Positives = 318/672 (47%), Gaps = 127/672 (18%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG +K+G+ ++++ L+ MY+ +
Sbjct: 170 GELLHGFSVKSGLINSVFVSSALVDMYM-------------------------------K 198
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G E+ +F+ M RN VSWTA+ I G
Sbjct: 199 VGKTEQGCSVFENMTTRNVVSWTAV-------------------------------IVGL 227
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
V G S + L F ++ S V + TF+ KA AE G ++ K GF +
Sbjct: 228 VHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETA 287
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N+L T+ K + D +F +M DVVSWT ++ +++MGD
Sbjct: 288 YVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGD-------------- 333
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
E A F++M + PN F+ V+SA A+L + G +H
Sbjct: 334 -----------------EERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIH 376
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
H L++G+ + +SN++I LYSKCG ++ LVFD + KD ++SW+++I Y
Sbjct: 377 GHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKD---IISWSTIISVY---C 430
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
Q AKE F N +SW M G PN+ +SVL
Sbjct: 431 QGSHAKEAF------NYLSW----------------------MSREGPKPNEFALASVLS 462
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
S+A LE GK +H + +G ++ + +AL Y++SG+++ + ++FD + + + +S
Sbjct: 463 VCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVS 522
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
WT M+ G AE GY++E+I+LFE + + P+ +T + +L AC+H+GLVD G Y+ M
Sbjct: 523 WTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMT 582
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y I P+ HY C++D+L R+GRLSEAE + +MPF D W++LL C+ + + A
Sbjct: 583 NEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRA 642
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
A + + +L ++ L+NIY+++GR +A +VRKLM KG+ K G SW+ +Q
Sbjct: 643 IWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQ 702
Query: 700 VHFFFQKTDHNP 711
++ F +P
Sbjct: 703 LNTFVAGVQSHP 714
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 160/438 (36%), Gaps = 106/438 (24%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQ--GRALHGHLIKTGIHKERYLTTRLLIMYLGSRK 71
E +F S I C NL I G +HGH ++ G+ ++ ++ +Y
Sbjct: 353 EYTFASVISAC---------ANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGL 403
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM----PERNEVSW------ 121
EA+ + + D++ + +I+ Q + +EA M P+ NE +
Sbjct: 404 LQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSV 463
Query: 122 -----------------------------TALISGFMKHGRVEESMWYFERNPFQNVISW 152
+ALIS + + G ++E+ F+ +++SW
Sbjct: 464 CGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSW 523
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
TA I G+ ++G+S EA+ LF + G+ P+ VTF I AC LG + L+
Sbjct: 524 TAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLM-- 581
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
E +A S + I+D+ G L EA +
Sbjct: 582 -------------------TNEYQIAPSK---------EHYGCIIDLLCRAGRLSEAEHM 613
Query: 273 FDEMP-ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
MP ++V WS ++ G + A QM R PN++ I L+ + S
Sbjct: 614 VRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLR--LHPNSAGAHITLANIYSASG 671
Query: 332 LRS-GMHVHAHVLKIGIEKD-------------VFISNALIDLYSKCGET---------K 368
R HV + G+ K+ F++ SK T
Sbjct: 672 RREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELLRTSIG 731
Query: 369 DGRLVFDSIVEKDVAHVV 386
D RL F SIVE D V+
Sbjct: 732 DARLDFGSIVEDDATPVL 749
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 298/573 (52%), Gaps = 35/573 (6%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G V + F + P +V+ W I G+ + E ++L+L +L+ GV P+ TF +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 192 KACA-EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
+ G + + K G ++ V N+L+ + G +D+AR VFDR K DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
S W++MI+ YN+ EE+ L +M R
Sbjct: 202 FS-------------------------------WNLMISGYNRMKEYEESIELLVEMERN 230
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P + +VLSA + +K VH +V + E + + NAL++ Y+ CGE
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIA 290
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+F S+ +DV +SW S++ GY G ++ A+ FD MP R+ +SW+ +I GYL
Sbjct: 291 VRIFRSMKARDV---ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
F+ +F EM +G IP++ T SVL A A + SLE G+ + I K DV +G
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D Y K G E +++VF M +++ +WT MV GLA +G +E+I +F +M+ SI P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+++T L VL AC+HSG+VD+ K+F M + I+P+ HY C+VDML R+G + EA +
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
+ MP P+S W +LL + + +E +AE A K + +L ++ A Y LL NIYA RW
Sbjct: 528 LRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRW 587
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
D VR+ + + ++K+ G S +EV H F
Sbjct: 588 KDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 171/324 (52%), Gaps = 7/324 (2%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+ + G ++ + F+R ++V SW I G+ + E+++L +++ + V P
Sbjct: 175 ALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSP 234
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
VT + AC+++ D L V + + E + + N+L+ GE+D+A +F
Sbjct: 235 TSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIF 294
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
M+ RDV+SWT I+ ++E G+L AR FD+MP R+ +SW++MI Y ++G E+
Sbjct: 295 RSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLE 354
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+FR+M P+ VL+A A L +L G + ++ K I+ DV + NALID+Y
Sbjct: 355 IFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVS 418
KCG ++ + VF + ++D +W +M+ G NGQ +EA ++F M + +D++
Sbjct: 415 KCGCSEKAQKVFHDMDQRD---KFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 419 WSAIISGYLEHKQFDLVFAVFNEM 442
+ ++S D F +M
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKM 495
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 158/297 (53%), Gaps = 18/297 (6%)
Query: 29 KDITSQNLVIQG---RALHGHLIKTGIHKERYL---TTRLLIMYLGSRKSLEANEIVKDL 82
+D+ S NL+I G + I+ + ER L T+ L++ L + ++ ++ K +
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 83 NGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ + L + N ++NA G ++ A R+F M R+ +SWT+++ G+++ G +
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ + YF++ P ++ ISWT I G+++ G E+L++F ++ +G+ P+E T S+ AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A + +G + I K + V V N+LI + K G + A+ VF M++RD +WT
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 255 VILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
++ G EA ++F +M + +++++ +++ N SG ++A + F +M
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 174/595 (29%), Positives = 313/595 (52%), Gaps = 39/595 (6%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVK 181
+L+S +++ G++E++ + F ++++SW A I G+ NG +AL+LF + + +K
Sbjct: 226 SLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIK 285
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ VT S+ ACA +++ ++ + G I + G + SV N+L++ K A
Sbjct: 286 PDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQ 345
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
F + ++D++SW ILD + +SG
Sbjct: 346 TFLMISRKDLISWNAILDA-------------------------------FTESGCETHL 374
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI---EKDVFISNAL 357
L M R +P++ ++ A++ ++ H++ ++ G+ + + N +
Sbjct: 375 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGM 434
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D Y+KCG K +F S+ EK +VV+ NSMI GY + ++A +F+ M + +
Sbjct: 435 LDAYAKCGNMKYAVNIFGSLSEKR--NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLT 492
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+W+ ++ Y E+ D ++F+E+ G P+ T S+L A A +AS+ + HG +
Sbjct: 493 TWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYV 552
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
I+ F DV L A D Y+K G + + ++F P K+ + +T MV G A G +E++
Sbjct: 553 IRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEAL 611
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
+F M + + P+ + I +VLFACSH+GLVD+G K FNS+E ++ +P Y CVVD+
Sbjct: 612 RIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDL 671
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+R GR+ +A F+ MP E ++N W +LL C+T+ ++ +L+K+ ++ Y
Sbjct: 672 LARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNY 731
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
V++SN+YA+ RW M +R+LM + L+K GCSW+EV + + F +P+
Sbjct: 732 VVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQ 786
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 213/475 (44%), Gaps = 104/475 (21%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
++N + G L+ +LF M +R+ V W ++SG
Sbjct: 19 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSG------------------------- 53
Query: 153 TAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ GF E ++LF + + + KPN VT + + CA + + G SV +
Sbjct: 54 ---LAGF--QSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVI 107
Query: 212 KAGFEKHVSVCNSLITLSLKMGEV-DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K+G E H N+LI++ K G V A + F+R+E +DVVS
Sbjct: 108 KSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVS------------------ 149
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
W+ +IA ++++ + EEAF+LF M + +PN + + +L ASL+
Sbjct: 150 -------------WNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 196
Query: 331 ---ALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
R G VH HVL+ + + +DV + N+L+ Y + G
Sbjct: 197 ENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIG--------------------- 235
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LS 445
QME+A+ LF NM R+ VSW+AII+GY + ++ +F+E + L
Sbjct: 236 -------------QMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLE 282
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIES 504
P+ T SVL A A V +L+ K +HG II+ G D +G AL YAK ++
Sbjct: 283 TIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQA 342
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
+ + F + K+ ISW ++ ESG +NL M + I P+ +TIL+++
Sbjct: 343 ALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTII 397
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 159/317 (50%), Gaps = 43/317 (13%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ-SGYPEEAFRLFRQMTRYS-FK 313
+L+++ + G L ++F EM +R+ V W+++++ + E RLFR M + K
Sbjct: 19 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAK 78
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG-ETKDGRL 372
PN+ +IVL A L+ +G VH++V+K G+E NALI +Y+KCG D
Sbjct: 79 PNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYA 137
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
F+ I KDV VSW+A+I+G+ E+K
Sbjct: 138 AFNRIEFKDV----------------------------------VSWNAVIAGFSENKFT 163
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASV---ASLEKGKDLHGKIIK-LGFPYDVFL 488
+ F +F+ ML PN +T +S+L AS+ A GK++H +++ + DV +
Sbjct: 164 EEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSV 223
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE-MEKTS 547
+L Y + G +E + +F M ++ +SW ++ G A +G +++ LF E + +
Sbjct: 224 INSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLET 283
Query: 548 ITPNELTILSVLFACSH 564
I P+ +T++SVL AC+H
Sbjct: 284 IKPDSVTLVSVLPACAH 300
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 187/419 (44%), Gaps = 42/419 (10%)
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
G+ E V AL+S + K + ++ F +++ISW A + F ++G + L
Sbjct: 319 GLREDTSVG-NALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNL 377
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF---EKHVSVCNSLITL 228
+L G++P+ +T +I + A ++ + + G + ++ N ++
Sbjct: 378 LHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDA 437
Query: 229 SLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
K G + A ++F + EKR+VV+ ++ ++ +A IF+ M E + +W++M
Sbjct: 438 YAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLM 497
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
+ Y ++ +P++A LF ++ KP+ +L A A + ++ H +V++
Sbjct: 498 VRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF 557
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV ++ A ID+YSKCG +F S +KD +V + +M+GG+ ++G EEA
Sbjct: 558 -NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKD---LVMFTAMVGGFAMHGMGEEA--- 610
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
+F+ ML G P+ ++VL A + +
Sbjct: 611 ----------------------------LRIFSYMLELGVKPDHVIITAVLFACSHAGLV 642
Query: 468 EKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
++G + I K+ GF + + D A+ G I+ + RMP + N W ++
Sbjct: 643 DEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLL 701
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 168/370 (45%), Gaps = 22/370 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPE-RNEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
N M++A + GN++ A +F + E RN V+ ++ISG++ +++ F ++
Sbjct: 432 NGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDL 491
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+W + + +N F +AL LF +L G+KP+ VT SI ACA + + G
Sbjct: 492 TTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGY 551
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ +A F V + + I + K G V A +F ++D+V +T ++ F G EA
Sbjct: 552 VIRACFND-VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEA 610
Query: 270 RRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLS 324
RIF M E + V + ++ + +G +E +++F + + + F+P ++ V+
Sbjct: 611 LRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVD 670
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
LA ++ + V ++ IE + I L+ E + GR+V D + + + +
Sbjct: 671 LLARGGRIKDA---YTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDN 727
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRN-----DVSW-------SAIISGYLEHKQF 432
+ ++ M Y + + + E+ M R SW + I+G H Q
Sbjct: 728 IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQR 787
Query: 433 DLVFAVFNEM 442
+++ + +
Sbjct: 788 SIIYRTLSTL 797
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ ++ I+ + G++ A +LF P+++ V +TA++ GF HG E
Sbjct: 559 DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGE---------- 608
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
EAL++F +LE GVKP+ V +++ AC+ G
Sbjct: 609 ---------------------EALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWK 647
Query: 206 VFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+F I K GF+ + ++ L + G + A + RM
Sbjct: 648 IFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRM 688
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE-SGYAKESINLFEEMEKT 546
L L + YAKSG ++ ++F M ++ + W +++ GLA + E + LF M
Sbjct: 15 LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMV 74
Query: 547 S-ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT----CVVDMLSRS 601
+ PN +TI VL C+ L + K +S Y IK +T ++ M ++
Sbjct: 75 NEAKPNSVTIAIVLPVCAR--LREDAGKSVHS----YVIKSGLESHTLAGNALISMYAKC 128
Query: 602 GRL-SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
G + S+A N + F+ D +W ++++G + + E A K
Sbjct: 129 GLVCSDAYAAFNRIEFK-DVVSWNAVIAG---FSENKFTEEAFK 168
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 296/542 (54%), Gaps = 44/542 (8%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EAL+++ ++ V+ N TF+ + K G + G I K GF V V NSL+
Sbjct: 57 EALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLL 116
Query: 227 TLSLKMGE-VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
E + A VF+ M +RDV+SW ++ ++ G++ A + D+MPERN V+W+
Sbjct: 117 GFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWN 176
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
++ +++G E A +F QM LR+ +
Sbjct: 177 SVVCGLSKAGNMELAHSVFEQM-----------------------PLRNEVSW------- 206
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
N++I Y + G+ + + +F + EK V VSW +MI GY NG ++ A+
Sbjct: 207 ---------NSMISGYVRIGDVRAAQSIFYQMPEKTV---VSWTAMISGYATNGDLKSAE 254
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASV 464
+F++MP +N VSW+A+ISGY+ + +FD VF+ ML++GE P+++T S+L A A +
Sbjct: 255 NIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHL 314
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
SLE GK ++ I K + LG AL D +AK GD+E+++ VF M + I+WT MV
Sbjct: 315 GSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMV 374
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
GLA +G +E+INLF++M P+++ ++VL AC+H GLV++G + F+ M + I
Sbjct: 375 SGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGI 434
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
KP HY C+VD+L R+G+L EA F M +P++ WA+LL CK + N + + +
Sbjct: 435 KPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTE 494
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
+ +P+ L+SN+ AS GRW D ++ R M ++ + K GCS ++V N+VH F
Sbjct: 495 KIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFL 554
Query: 705 QK 706
K
Sbjct: 555 AK 556
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 177/339 (52%), Gaps = 25/339 (7%)
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+EA R++ +M + N+ F+ +L + +AL G +H +LK+G VF+ N+L
Sbjct: 56 KEALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSL 115
Query: 358 IDLYSKCGET-KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
+ Y+ C E VF+ + E+D V+SWNSMI Y G+++ A L D MP+RN
Sbjct: 116 LGFYANCSENLGSAYRVFEEMPERD---VISWNSMISAYMTRGEIQSAIGLLDKMPERNI 172
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
V+W++++ G + +L +VF +M L E+ +++S++ + + + + +
Sbjct: 173 VTWNSVVCGLSKAGNMELAHSVFEQMPLRNEV----SWNSMISGYVRIGDVRAAQSIFYQ 228
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+ + V TA+ YA +GD++S+ +F+ MP KN +SW M+ G + ++
Sbjct: 229 MPE----KTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQA 284
Query: 537 INLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT--- 592
+ +F M P++ T++S+L AC+H G ++ G K+ NS IK N H +
Sbjct: 285 LCVFHHMLINGECRPDQTTLISILSACAHLGSLEHG-KWINSY-----IKKNKLHLSIPL 338
Query: 593 --CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++DM ++ G + A++ + M + W +++SG
Sbjct: 339 GNALIDMFAKCGDVENAKEVFHHMS-KRCIITWTTMVSG 376
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 128/243 (52%), Gaps = 6/243 (2%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N MI+ ++ G++ AQ +F MPE+ VSWTA+ISG+ +G ++ + F P +NV+
Sbjct: 207 NSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVV 266
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGL 209
SW A I G+V N +AL +F +L +G +P++ T SI ACA + G +
Sbjct: 267 SWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSY 326
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
I K + + N+LI + K G+V+ A+ VF M KR +++WT ++ G EA
Sbjct: 327 IKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREA 386
Query: 270 RRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLS 324
+FD+M + ++V + +++ G EE R+F QM + + KP + ++
Sbjct: 387 INLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVD 446
Query: 325 ALA 327
L
Sbjct: 447 LLG 449
>gi|357167336|ref|XP_003581113.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Brachypodium distachyon]
Length = 687
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 208/684 (30%), Positives = 335/684 (48%), Gaps = 98/684 (14%)
Query: 94 INANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWT 153
+ A + G+ A+RLFDGM R V+W A+++G H R
Sbjct: 3 LTALLSSGDTAAARRLFDGMRRRTVVTWNAMVAG---HAR-------------------- 39
Query: 154 AAICGFVQNGFSF-EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
CG SF +AL L ++ SGV P+E TF+S+ ACA +G V + K
Sbjct: 40 ---CG------SFLDALDLAARMHRSGVSPSEATFASVLGACARGRRLCVGAQVHCQVVK 90
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
+G E V SL+ ++ A +FD + R+ W+ ++ + L +A +
Sbjct: 91 SGSENFEVVGASLLDFYSSCFDLSAAHMLFDTLHPRNERLWSPMVVALVRFNLLSDALDL 150
Query: 273 FDEMP-ERNEVSWSVMIARYNQ--SGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALAS 328
D MP R+ +W+ +I+ Y + S +A LF R + + PN F VL A
Sbjct: 151 LDRMPAPRDVFAWTAVISGYARGASDCCRKAIGLFVRMLADHGVMPNEFTFDSVLRACVK 210
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD------------- 375
+ AL G VH +L+ G + D I++AL+DLY D LV++
Sbjct: 211 MGALDFGRSVHGCLLRSGFDTDKLITSALVDLYCSSDAVADALLVYNDLEMPSLITSNAL 270
Query: 376 -----SIVEKDVAHVV----------SWNSMIGGYGLNGQMEEAKELFDNMPK------- 413
S+ D A +V ++N MI YG+ G++E+ + +F+ MP+
Sbjct: 271 IGGLISMHMTDEAKIVFSQMPEHDSSTYNLMIKAYGIEGKLEQCQRMFEKMPRRNIVTLN 330
Query: 414 -------------------------RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
RN ++W+++ISGY+++ +F M I
Sbjct: 331 SMMSVLLQNGKLEEGLKLFEQIKDERNTITWNSMISGYIQNNHSSEALKLFVTMRRLSII 390
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
+ STF ++L A +V ++E+GK +H + K F + ++GTAL D Y+K G + +
Sbjct: 391 CSPSTFPTLLHACGTVGTIEQGKMVHAHLCKTPFESNGYVGTALVDMYSKCGCVSDALDA 450
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F + N SWT ++ GLA +G ++I F M + I PNE+T L +L A S +GLV
Sbjct: 451 FCCITSPNVASWTSVINGLAHNGQCLKAIVEFGRMLRHRINPNEITFLGLLMASSRAGLV 510
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+KG+++F+SME Y + P HYTC VD+L R+GR+ EAE FI++MP D AW +LL+
Sbjct: 511 NKGMRFFHSMER-YGLLPTVEHYTCAVDLLGRNGRIIEAEKFISAMPVPADGVAWGALLT 569
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C + ++ E+ + L+ + +H + YV +SNIYA G+W D + VR + +K
Sbjct: 570 ACWYSMDLEMGEKVAEKLFFMGTKHKSAYVAMSNIYAKLGKWEDVVKVRTRLRSLDAKKE 629
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
GCSW+ V++ VH F + ++P+
Sbjct: 630 PGCSWIGVKDTVHVFLVEDRNHPE 653
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 155/350 (44%), Gaps = 43/350 (12%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F+S + C+ + GR++HG L+++G ++ +T+ L+ +Y S
Sbjct: 198 EFTFDSVLRACV-------KMGALDFGRSVHGCLLRSGFDTDKLITSALVDLYCSSDAVA 250
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQW-------------------------------GN 102
+A + DL L+ N +I I G
Sbjct: 251 DALLVYNDLEMPSLITSNALIGGLISMHMTDEAKIVFSQMPEHDSSTYNLMIKAYGIEGK 310
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGFVQ 161
LE+ QR+F+ MP RN V+ +++S +++G++EE + FE+ +N I+W + I G++Q
Sbjct: 311 LEQCQRMFEKMPRRNIVTLNSMMSVLLQNGKLEEGLKLFEQIKDERNTITWNSMISGYIQ 370
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
N S EALKLF+ + + + TF ++ AC + G V + K FE + V
Sbjct: 371 NNHSSEALKLFVTMRRLSIICSPSTFPTLLHACGTVGTIEQGKMVHAHLCKTPFESNGYV 430
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-- 279
+L+ + K G V A F + +V SWT +++ G +A F M
Sbjct: 431 GTALVDMYSKCGCVSDALDAFCCITSPNVASWTSVINGLAHNGQCLKAIVEFGRMLRHRI 490
Query: 280 --NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
NE+++ ++ +++G + R F M RY P ++ + L
Sbjct: 491 NPNEITFLGLLMASSRAGLVNKGMRFFHSMERYGLLPTVEHYTCAVDLLG 540
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 305/583 (52%), Gaps = 85/583 (14%)
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN-EV-TFSSICKACAEINDFRLGLSV 206
+ + IC F + G L+ ++L+ KP+ E+ T+ S+ + CA++ + G +
Sbjct: 68 ITDYNIEICRFCELG----NLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRI 123
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+I E + + L+ + + G++ R +FD++ V W ++++ + ++G+
Sbjct: 124 HSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNF 183
Query: 267 GE------------------ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
E AR++FDE+ +R+ +SW+ MI+ Y +G E+ LF QM
Sbjct: 184 RESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQML 243
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+ L+ + S+ ++ ++N L+D+YSK G
Sbjct: 244 LLGINTD-------LATMVSV--------------------ELTLNNCLLDMYSKSGNLN 276
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
VF+++ E+ VVSW SMI GY G + + LF M K
Sbjct: 277 SAIQVFETMGERS---VVSWTSMIAGYAREGLSDMSVRLFHEMEKE-------------- 319
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
DL PN T + +L A AS+A+LE+G+++HG I++ GF D +
Sbjct: 320 ----DL-------------FPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHV 362
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL D Y K G + +R +FD +P+K+ +SWTVM+ G GY E+I F EM + I
Sbjct: 363 ANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGI 422
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+E++ +S+L+ACSHSGL+D+G +FN M I+P HY C+VD+L+R+G LS+A
Sbjct: 423 EPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAY 482
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
FI MP EPD+ W +LL GC+ Y + ++AE+ +++++L E+ YVLL+NIYA A
Sbjct: 483 KFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAE 542
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+W + +R+ + +GLRK+ GCSW+E++ +VH F +P
Sbjct: 543 KWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHP 585
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 172/403 (42%), Gaps = 110/403 (27%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN- 144
D V+ + ++ + G+L E +R+FD + W L++G+ K G ES+ F+R
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194
Query: 145 -----------------PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
++VISW + I G+V NG S + L LF ++L G+ + T
Sbjct: 195 ELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATM 254
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
S+ +++ N L+ + K G ++ A VF+ M +
Sbjct: 255 VSV---------------------------ELTLNNCLLDMYSKSGNLNSAIQVFETMGE 287
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
R VVSWT MIA Y + G + + RLF +M
Sbjct: 288 RSVVSWT-------------------------------SMIAGYAREGLSDMSVRLFHEM 316
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
+ PN+ + +L A ASL AL G +H H+L+ G D ++NAL+D+Y KCG
Sbjct: 317 EKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 376
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
RL+FD I EKD +VSW MI GYG++G EA
Sbjct: 377 GLARLLFDMIPEKD---LVSWTVMIAGYGMHGYGSEA----------------------- 410
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG 470
A FNEM SG P++ +F S+L A + L++G
Sbjct: 411 --------IAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 445
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 193/453 (42%), Gaps = 83/453 (18%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
S P+ +Y + L L D+ S + GR +H + + + L ++L+ MY+
Sbjct: 94 SPKPDLELRTYC-SVLQLCADLKS---IQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTC 149
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGN------------------LEEAQRLFD 111
E I + + + N ++N + GN +E A++LFD
Sbjct: 150 GDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFD 209
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPF------------------------- 146
+ +R+ +SW ++ISG++ +G E+ + FE+
Sbjct: 210 ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMY 269
Query: 147 ------------------QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
++V+SWT+ I G+ + G S +++LF ++ + + PN +T +
Sbjct: 270 SKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMA 329
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
I ACA + G + G I + GF V N+L+ + LK G + LAR +FD + ++
Sbjct: 330 CILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEK 389
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLF 304
D+VSWTV++ + G EA F+EM E +EVS+ ++ + SG +E + F
Sbjct: 390 DLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF 449
Query: 305 RQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
M +P + ++ ++ LA L + + + IE D I AL+
Sbjct: 450 NMMRNNCCIEPKSEHYACIVDLLARAGNLSKA---YKFIKMMPIEPDATIWGALL----- 501
Query: 364 CGETKDGRLVFD-SIVEKDVAHVVSWNSMIGGY 395
CG R+ D + EK HV GY
Sbjct: 502 CG----CRIYHDVKLAEKVAEHVFELEPENTGY 530
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 74/323 (22%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL 63
S+R + E F + I T C+L S + +G+ +HGH+++ G +R++ L+
Sbjct: 309 SVRLFHEMEKEDLFPNSI-TMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALV 367
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
MYL + G L A+ LFD +PE++ VSWT
Sbjct: 368 DMYL-------------------------------KCGALGLARLLFDMIPEKDLVSWTV 396
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+I+G+ H G+ EA+ F ++ SG++P+
Sbjct: 397 MIAGYGMH-------------------------------GYGSEAIAAFNEMRNSGIEPD 425
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIF-KAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
EV+F SI AC+ G F ++ E ++ L + G + A
Sbjct: 426 EVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFI 485
Query: 243 DRME-KRDVVSWTVIL---DVFIEMGDLGE--ARRIFDEMPERNEVSWSVMIAR-YNQSG 295
M + D W +L ++ ++ L E A +F+ PE + V++A Y ++
Sbjct: 486 KMMPIEPDATIWGALLCGCRIYHDV-KLAEKVAEHVFELEPE--NTGYYVLLANIYAEAE 542
Query: 296 YPEEAFRLFRQMTRYSFKPNTSC 318
EE +L ++ R + N C
Sbjct: 543 KWEEVKKLRERIGRRGLRKNPGC 565
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/603 (30%), Positives = 310/603 (51%), Gaps = 69/603 (11%)
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
G+ N + +L+ +++ GRV E+ F+ P ++V +W A + G +N + +A+ L
Sbjct: 96 GLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTL 155
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
+++ GV + VT SS+ C + D L L + K G + VCN+LI
Sbjct: 156 LGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALI----- 210
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
DV+ ++G L EA +F M R+ V+W+ +I+
Sbjct: 211 --------------------------DVYGKLGMLTEAHWVFGGMALRDLVTWNSIISAN 244
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q G A LF M ++ G+ DV
Sbjct: 245 EQGGKVAAAVELFHGM-----------------------------------MESGVCPDV 269
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEK--DVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
+L ++CG+ + V + + DV +++ N+M+ Y +++ A+++FD
Sbjct: 270 LTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFD 329
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLE 468
N+P R+ VSW+ +I+GY+++ + ++N+M G P + TF SVL A + + L+
Sbjct: 330 NLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQ 389
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
+G +H IK G DV++ T L D YAK G + + +F+ MP ++ W ++ GL
Sbjct: 390 QGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLG 449
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G+ ++++LF +M++ I P+ +T +S+L ACSH+GLVD+G +F+ M+ +Y I P
Sbjct: 450 VHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIA 509
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
+HYTC+VDML R+G+L EA +FI SMP +PDS W +LL C+ + N ++ + A +NL++
Sbjct: 510 KHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFE 569
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
L E+ YVL+SN+YA G+W VR L+ + L+K+ G S +EV+ V F+ T
Sbjct: 570 LDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQ 629
Query: 709 HNP 711
P
Sbjct: 630 TEP 632
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 129/353 (36%), Gaps = 101/353 (28%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D++ N M++ + ++ AQ++FD +P+R+ VSW LI+G+M
Sbjct: 304 DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYM---------------- 347
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGL 204
QNG + EA++++ + G+KP + TF S+ A + + + G+
Sbjct: 348 ---------------QNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGM 392
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ L K G V V LI L K G++ A +F+ M +R W I
Sbjct: 393 RMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAI-------- 444
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
IA G+ +A LF QM + KP+ F +L+
Sbjct: 445 -----------------------IAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLA 481
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD--SIVEKDV 382
A S G GR FD V V
Sbjct: 482 AC-----------------------------------SHAGLVDQGRSFFDLMQTVYGIV 506
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYLEHKQFDL 434
+ M+ G GQ++EA E +MP + D + W A++ H ++
Sbjct: 507 PIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEM 559
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 143/340 (42%), Gaps = 50/340 (14%)
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETK 368
+ +P++ F ++ A S +HA L++G+ +VF S +L+ Y + G
Sbjct: 63 HPLRPDSFTFPPLVRAAPGPA---SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVA 119
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+ VFD + E+DV +WN+M+ G N + +A L
Sbjct: 120 EAYRVFDEMPERDVP---AWNAMLSGLCRNTRAADAVTL--------------------- 155
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
M+ G + T SSVL + +H +K G ++F+
Sbjct: 156 ----------LGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFV 205
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL D Y K G + + VF M ++ ++W ++ + G ++ LF M ++ +
Sbjct: 206 CNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGV 265
Query: 549 TPNELTILSVLFACSHSG--LVDKGLKYFNSME--PIYNIKPNGRHYTCVVDMLSRSGRL 604
P+ LT++S+ A + G L K + + + +I +VDM ++ ++
Sbjct: 266 CPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAG----NAMVDMYAKMSKI 321
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
A+ +++P + D +W +L++G Y +A A++
Sbjct: 322 DAAQKVFDNLP-DRDVVSWNTLITG---YMQNGLANEAIR 357
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 43/223 (19%)
Query: 66 YLGSRKS---LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
YLG + + A I LN D+ V C+I+ + G L EA LF+ MP R+ W
Sbjct: 384 YLGGLQQGMRMHALSIKTGLN-LDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWN 442
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A+I+G HG +AL LF ++ + +KP
Sbjct: 443 AIIAGLGVHGH-------------------------------GAKALSLFSQMQQEEIKP 471
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ VTF S+ AC+ G S F L+ G ++ + + G++D A
Sbjct: 472 DHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEF 531
Query: 242 FDRME-KRDVVSWTVILDVF-----IEMGDLGEARRIFDEMPE 278
M K D W +L +EMG + ++ +F+ PE
Sbjct: 532 IQSMPIKPDSAVWGALLGACRIHGNVEMGKVA-SQNLFELDPE 573
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 256/450 (56%), Gaps = 12/450 (2%)
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI--------VL 323
+F ++P N + MI Y Q+ +A ++ +M R P+T+ FS+ +L
Sbjct: 64 VFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLL 123
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A +L A R G VHAHV + G E + N+LI++Y++CG+ R FD + EKDV
Sbjct: 124 KACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDV- 182
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSWN++I + GQM A+ELF +MP + VSW+A++SGY F VF M
Sbjct: 183 --VSWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQ 240
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+ G P+ + +VL A A + +LE G+ ++ K G V++ AL + YAK G IE
Sbjct: 241 MEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIE 300
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFAC 562
+ ++F M +K+ ISW+ + GLA G A+E++ LFE M++ + PN +T + +L AC
Sbjct: 301 EALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSAC 360
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH+GLVD+GL+Y + M+ Y ++P HY CVVD+L RSGR+ A D I MP PD
Sbjct: 361 SHAGLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKI 420
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W SLLS C+++ + + A A + L +L V+L+N+Y +AGRW + + RK +
Sbjct: 421 WGSLLSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRS 480
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ RK+ GCS +EV N V F D P+
Sbjct: 481 RSTRKTPGCSMIEVDNVVREFVAGQDLGPE 510
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 149/285 (52%), Gaps = 11/285 (3%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS--------ICK 192
F + P N+ A I + QN +A+++++++L P+ FS + K
Sbjct: 65 FAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLK 124
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
AC + RLG V + ++G E H V NSLI + + G++ AR FD M ++DVVS
Sbjct: 125 ACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVS 184
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W ++ MG + AR +F MP++ VSW+ +++ Y G A +FR M F
Sbjct: 185 WNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGF 244
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+P+ VL A A L AL G ++A+ K G+ V+I NAL+++Y+KCG ++
Sbjct: 245 EPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQ 304
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+F + EKD V+SW++ IGG +G+ EA LF+ M + V
Sbjct: 305 LFHGMSEKD---VISWSTAIGGLAAHGRAREAVRLFEVMDREGRV 346
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 161/344 (46%), Gaps = 12/344 (3%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
VV N +I + G+L A++ FDGM E++ VSW LIS + G++ + F P +
Sbjct: 152 VVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHARMGQMRRARELFYSMPDK 211
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
V+SWTA + G+ G A+++F + G +P++V+ ++ ACA++ LG ++
Sbjct: 212 TVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIY 271
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
K G V +CN+L+ + K G ++ A +F M ++DV+SW+ + G
Sbjct: 272 AYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAR 331
Query: 268 EARRIFDEMPER-----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSI 321
EA R+F+ M N +++ +++ + +G +E R QM Y +P +
Sbjct: 332 EAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYLDQMKEDYGVEPGVEHYGC 391
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE-- 379
V+ L ++ + + + + D I +L+ G+ + + + +VE
Sbjct: 392 VVDLLGRSGRIQRALDT---IRGMPVPPDGKIWGSLLSACRSHGDVETAVVAAERLVELE 448
Query: 380 -KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
DV ++V ++ G G G++ ++ + R S I
Sbjct: 449 PGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTPGCSMI 492
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 281/518 (54%), Gaps = 43/518 (8%)
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME----KRDVVSWTVILD 258
GL V LI E ++ N L+ +G++ + V + + D+V IL
Sbjct: 75 GLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA---FRLFRQMTRYSFKPN 315
++ + G L AR++FDEM ++ V+W+ MI Y+Q GY A LF +M R +PN
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPN 194
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
S ++ L + G +H K G +++VF+ ++L+D+Y++CGE
Sbjct: 195 EFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGE--------- 245
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ E++ +FD + +N+VSW+A+ISG+ + +
Sbjct: 246 -------------------------LRESRLVFDELESKNEVSWNALISGFARKGEGEEA 280
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F +M G + T+S++LC+S++ SLE+GK LH ++K G ++G L
Sbjct: 281 LGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHM 340
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK-TSITPNELT 554
YAKSG+I +++VFDR+ + +S M+ G A+ G KE++ LFEEM I PN++T
Sbjct: 341 YAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDIT 400
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
LSVL ACSH+GL+D+GL YF M+ Y ++P HYT VVD+ R+G L +A+ FI M
Sbjct: 401 FLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEM 459
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P EP++ W +LL K +KN ++ A + + +L +P + LLSNIYASAG+W D
Sbjct: 460 PIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVA 519
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VRK M + GL+K CSWVE+ N VH F +P+
Sbjct: 520 KVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQ 557
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/514 (25%), Positives = 235/514 (45%), Gaps = 87/514 (16%)
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
TT L ++ L + SLE + + ++ ++ C + ++ G L L + +
Sbjct: 73 TTGLHVLDLINNGSLEPDRTI-----YNKLLKRCTMLGKLKQGKLVHTH-LMNSKFRNDL 126
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS---FEALKLFLKL 175
V +++ + K G +E + F+ ++V++WT+ I G+ Q+G++ AL LFL++
Sbjct: 127 VIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEM 186
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
+ G++PNE SS+ K C + G + G +K GF+++V V +SL+ + + GE+
Sbjct: 187 VRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGEL 246
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
+R VFD +E ++ VSW ++ F AR+ G
Sbjct: 247 RESRLVFDELESKNEVSWNALISGF--------ARK-----------------------G 275
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
EEA LF +M R F +S +L + ++ +L G +HAH++K G + ++ N
Sbjct: 276 EGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGN 335
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
L+ +Y+K G D + VFD +V+ D VVS NSM+ GY +G +EA ELF+
Sbjct: 336 TLLHMYAKSGNICDAKKVFDRLVKVD---VVSCNSMLIGYAQHGLGKEAVELFE------ 386
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLH 474
EM+L EI PN TF SVL A + L++G
Sbjct: 387 -------------------------EMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYF 421
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV------RGL 527
+ K G + T + D + ++G ++ ++ + MP + N W ++ +
Sbjct: 422 ELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNT 481
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
YA + + +E P T+LS ++A
Sbjct: 482 EMGAYAAQKV-----LELDPFYPGAHTLLSNIYA 510
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 182/361 (50%), Gaps = 14/361 (3%)
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH-VVSWNSMI 392
+G+HV + +E D I N L+ + G+ K G+LV ++ + +V NS++
Sbjct: 74 TGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSIL 133
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH---KQFDLVFAVFNEMLLSGEIP 449
Y G +E A+++FD M ++ V+W+++I+GY + +F EM+ G P
Sbjct: 134 FMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRP 193
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
N+ SS++ + S GK +HG K GF +VF+G++L D YA+ G++ SR VF
Sbjct: 194 NEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVF 253
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
D + KNE+SW ++ G A G +E++ LF +M++ E T ++L + S +G ++
Sbjct: 254 DELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLE 313
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+G K+ ++ K G ++ M ++SG + +A+ + + + D + S+L G
Sbjct: 314 QG-KWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRL-VKVDVVSCNSMLIG 371
Query: 630 CKTYKNEQIAERAVK-----NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
Y + + AV+ LW E + ++ + + AG + + +LM + G
Sbjct: 372 ---YAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYG 428
Query: 685 L 685
L
Sbjct: 429 L 429
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 187/451 (41%), Gaps = 61/451 (13%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK T + QG+ +H HL+ + + + +L MY A ++ ++ D
Sbjct: 97 LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156
Query: 87 LVVHNCMINANIQWGNLEEA--------QRLFDGMPERNEVSWTALIS--GFM------- 129
+V MI Q G A + + DG+ NE + ++L+ GF+
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGL-RPNEFALSSLVKCCGFLGSCVDGK 215
Query: 130 --------------------------KHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ G + ES F+ +N +SW A I GF + G
Sbjct: 216 QIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKG 275
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
EAL LF+K+ G E T+S++ + + G + + K+G + V N
Sbjct: 276 EGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGN 335
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-----E 278
+L+ + K G + A+ VFDR+ K DVVS +L + + G EA +F+EM E
Sbjct: 336 TLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIE 395
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM-- 336
N++++ ++ + +G +E F M +Y +P S ++ V+ R+G+
Sbjct: 396 PNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFG-----RAGLLD 450
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+ + ++ IE + I AL+ T+ G ++E D + + + Y
Sbjct: 451 QAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYA 510
Query: 397 LNGQMEEA----KELFDN-MPKRNDVSWSAI 422
GQ ++ KE+ D+ + K SW I
Sbjct: 511 SAGQWKDVAKVRKEMKDSGLKKEPACSWVEI 541
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 218/799 (27%), Positives = 363/799 (45%), Gaps = 149/799 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK +QN V +G+++H + T + + + T ++ Y +A + ++ D
Sbjct: 59 VLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRD 118
Query: 87 LVVHNCMINANIQWGNLEEAQRLF------------------------------------ 110
+V+ N M+ + WG EEA L
Sbjct: 119 VVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHG 178
Query: 111 ----DGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
+GM + N TALI GF + F+ +N++SW A I G+ G F
Sbjct: 179 YCLRNGMFDSNPHVATALI-GFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYF 237
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL----------------- 209
+AL+LF+++L VK + VT +ACAE+ +LG + L
Sbjct: 238 KALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALL 297
Query: 210 --------------IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-------KR 248
+F++ + + NS+I+ G + A +F RM+ +R
Sbjct: 298 NMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDER 357
Query: 249 DVVSW---------------------------------TVILDVFIEMGDLGEARRIFDE 275
VV +L ++ E+ + ++IFD
Sbjct: 358 TVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDR 417
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
M + +SW+ MI ++ +A LF +M KPN+ +L+A + L G
Sbjct: 418 MKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFG 477
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+H +V+K IE + + AL D+Y CG+
Sbjct: 478 RSIHGYVMKHSIEINQPLRTALADMYMNCGDEA--------------------------- 510
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
A++LF+ P R+ +SW+A+I+ Y+++ Q +F+ M+ E PN T
Sbjct: 511 -------TARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAE-PNSVTII 562
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPY--DVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+VL + +A+L +G+ LH + + GF D+ L A YA+ G ++S+ +F +P
Sbjct: 563 NVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+N ISW M+ G +G +++ F +M + PN +T +SVL ACSHSG ++ GL+
Sbjct: 623 KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 682
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
F+SM +N+ P HY+C+VD+L+R G + EA +FI+SMP EPD++ W +LLS C+ Y
Sbjct: 683 LFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAY 742
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
+ + A+ + L KL + YVLLSN+YA+AG W++ +R + EKGLRK G SW
Sbjct: 743 SDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISW 802
Query: 694 VEVRNQVHFFFQKTDHNPK 712
+ V+NQVH F +P+
Sbjct: 803 IIVKNQVHCFSAGDRSHPQ 821
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 152/602 (25%), Positives = 262/602 (43%), Gaps = 74/602 (12%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS-WTALI 125
L + +E+ ++ + LV+ C ++ G + R G ++V TA++
Sbjct: 38 LSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERG--KSIHRSIQGTDLMDDVRVGTAVV 95
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
+ K G VE++ F+ ++V+ W A + G+V G EA+ L ++ ++PN
Sbjct: 96 DFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSR 155
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
T ++ AC ++ RLG V G + G F+ + V +LI L+ ++ + +FD
Sbjct: 156 TMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDL 214
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M R++VSW ++ + ++GD +A LF
Sbjct: 215 MVVRNIVSWNAMISGYYDVGDYF-------------------------------KALELF 243
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
QM K + + + A A L +L+ G +H +K +D++I NAL+++YS
Sbjct: 244 VQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNN 303
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G + +F+S+ +D WNSMI Y G EEA +LF M
Sbjct: 304 GSLESSHQLFESVPNRDAP---LWNSMISAYAAFGCHEEAMDLFIRMQSE---------- 350
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
G + ++ ++ E L SG L KGK LH +IK G
Sbjct: 351 GVKKDERTVVIMLSMCEELASG--------------------LLKGKSLHAHVIKSGMRI 390
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
D LG AL Y + +ES +++FDRM + ISW M+ LA + ++ LFE M
Sbjct: 391 DASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMR 450
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
++ I PN TI+S+L AC +D G + + ++I+ N T + DM G
Sbjct: 451 ESEIKPNSYTIISILAACEDVTCLDFG-RSIHGYVMKHSIEINQPLRTALADMYMNCGDE 509
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
+ A D P + D +W ++++ +Y A +A+ ++ E V + N+
Sbjct: 510 ATARDLFEGCP-DRDLISWNAMIA---SYVKNNQAHKALLLFHRMISEAEPNSVTIINVL 565
Query: 665 AS 666
+S
Sbjct: 566 SS 567
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 164/405 (40%), Gaps = 105/405 (25%)
Query: 14 ETSFNSY-IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKS 72
E NSY I + L +D+T + GR++HG+++K I + L T L MY+
Sbjct: 453 EIKPNSYTIISILAACEDVTCLDF---GRSIHGYVMKHSIEINQPLRTALADMYM----- 504
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
NC G+ A+ LF+G P+R+ +SW A+I+ ++K+
Sbjct: 505 ------------------NC--------GDEATARDLFEGCPDRDLISWNAMIASYVKNN 538
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
+ +++ F R + S +PN VT ++
Sbjct: 539 QAHKALLLFHR--------------------------------MISEAEPNSVTIINVLS 566
Query: 193 ACAEINDFRLGLSVFGLIFKAGFE--KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
+ + G S+ + + GF +S+ N+ IT+ + G + A ++F + KR++
Sbjct: 567 SFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNI 626
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+S W+ MIA Y +G +A F QM
Sbjct: 627 IS-------------------------------WNAMIAGYGMNGRGSDAMLAFSQMLED 655
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHV-HAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
F+PN F VLSA + + G+ + H+ V + ++ + ++DL ++ G +
Sbjct: 656 GFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDE 715
Query: 370 GRLVFDSI-VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
R DS+ +E D + W +++ ++AK +F+ + K
Sbjct: 716 AREFIDSMPIEPDAS---VWRALLSSCRAYSDAKQAKTIFEKLDK 757
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 79/144 (54%)
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+++I K + + + +M G +PN +T VL A A+ ++E+GK +H I
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
DV +GTA+ D Y K G +E +R VFD M D++ + W MV G G +E++
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140
Query: 539 LFEEMEKTSITPNELTILSVLFAC 562
L EM + ++ PN T++++L AC
Sbjct: 141 LVREMGRENLRPNSRTMVALLLAC 164
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 306/627 (48%), Gaps = 113/627 (18%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR-VEESMWYFERNP 145
LV N I A + G++ A+R+FD MP R+ VSW AL++ + GR + + F+ P
Sbjct: 16 LVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMP 75
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NVISW + I G + +G L P
Sbjct: 76 SRNVISWNSIIAGCLAHG------DLAAASAYFARAP----------------------- 106
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
++V+ N+++ +++G ++ ARS+FD+M +R+VVS+T ++D G+
Sbjct: 107 ----------RRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLARCGE 156
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ AR +FD MP RN VSW+ MI+ Y + EEA +LF M
Sbjct: 157 VASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMP----------------- 199
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
EK+V A+I Y K G+ ++ R +FD I KD V
Sbjct: 200 ----------------------EKNVVACTAMITGYCKEGDLQNARRLFDGIRAKD---V 234
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+SWN++I GY NG EEA +L+ II ML
Sbjct: 235 ISWNAIISGYVHNGLGEEATKLY-------------II------------------MLRE 263
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G P+++T ++L A +S+A L +G+ H +IK + + AL Y+K G+++ S
Sbjct: 264 GIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDES 323
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF + ++ +SW ++ A+ G ++ I LF EME + PN++T LS+L AC H+
Sbjct: 324 ELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHA 383
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G VD+ LK F+ M Y I P HY C+VD+LSR+G+L +A +I MP E + N W +
Sbjct: 384 GRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGT 443
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL +T+ N Q+ E A K L E YV+LSNIYA+AG W + VR M EKG+
Sbjct: 444 LLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGV 503
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K G SW E+ ++VH F +P+
Sbjct: 504 KKQPGHSWTEIADKVHMFVGGDASHPE 530
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 212/434 (48%), Gaps = 44/434 (10%)
Query: 86 DLVVHNCMINANIQWG-NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
D V N ++ A + G +L A+ LFD MP RN +SW ++I+G + HG + + YF R
Sbjct: 46 DAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAASAYFARA 105
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +NV SW A + G V+ G +A LF ++ E V + + C E+ R
Sbjct: 106 PRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLAR-CGEVASAR--- 161
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+F A +++ ++I+ + ++ AR +F+ M +++VV+ T ++ + + G
Sbjct: 162 ----ELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEG 217
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
DL ARR+FD + ++ +SW+ +I+ Y +G EEA +L+ M R KP+ + +L+
Sbjct: 218 DLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLT 277
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A +SL LR G HA V+K +E + I NAL+ +YSKCG + LVF S+ +D
Sbjct: 278 ACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQD--- 334
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+VSWN++I Y +H ++ V A+F+EM L
Sbjct: 335 IVSWNTIIAAYA-------------------------------QHGRYQKVIALFHEMEL 363
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIE 503
G IPN TF S+L A +++ L + K + D +++G +E
Sbjct: 364 CGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLE 423
Query: 504 SSRRVFDRMPDKNE 517
+ MP + E
Sbjct: 424 KACSYIKEMPSEAE 437
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 186/380 (48%), Gaps = 20/380 (5%)
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A E+ + +LV MI+ + LEEA++LF+ MPE+N V+ TA+I+G+ K G +
Sbjct: 160 ARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGYCKEGDL 219
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ + F+ ++VISW A I G+V NG EA KL++ +L G+KP++ T ++ AC
Sbjct: 220 QNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLIALLTAC 279
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ + R G S ++ KA E +S+CN+L+T+ K G VD + VF ++ +D+VSW
Sbjct: 280 SSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWN 339
Query: 255 VILDVFIEMGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQM-TR 309
I+ + + G + +F EM N++++ M++ +G +E+ +LF M ++
Sbjct: 340 TIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLFDLMFSK 399
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
Y+ P ++ ++ L+ L +++ ++ E + + L+ G +
Sbjct: 400 YAISPRAEHYACIVDILSRAGQLEKAC---SYIKEMPSEAEKNVWGTLLCASQTHGNVQL 456
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM-----PKRNDVSWSAI-- 422
G L +V D ++ + Y G E + M K+ SW+ I
Sbjct: 457 GELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSWTEIAD 516
Query: 423 -----ISGYLEHKQFDLVFA 437
+ G H + D++ +
Sbjct: 517 KVHMFVGGDASHPEMDMILS 536
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 62/189 (32%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL +S L+ QGR+ H +IK + + L+ MY
Sbjct: 271 TLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMY---------------- 314
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
C GN++E++ +F + ++ VSW +I+ + +HGR
Sbjct: 315 -------SKC--------GNVDESELVFMSLKSQDIVSWNTIIAAYAQHGR--------- 350
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+Q VI+ LF ++ G+ PN++TF S+ AC
Sbjct: 351 ---YQKVIA-------------------LFHEMELCGLIPNDITFLSMLSACGHAGRVDE 388
Query: 203 GLSVFGLIF 211
L +F L+F
Sbjct: 389 SLKLFDLMF 397
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 264/458 (57%), Gaps = 39/458 (8%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
V+++++++ L +A ++FD+MP+RN +SW+ MI+ Y++ ++A L M R + +P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N +S VL + + +R +H ++K G+E DVF+ +ALID+++K GE +D
Sbjct: 161 NVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED----- 212
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
A +FD M + + W++II G+ ++ + D+
Sbjct: 213 -----------------------------ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F M +G I ++T +SVL A +A LE G H I+K + D+ L AL D
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVD 301
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K G +E + RVF++M +++ I+W+ M+ GLA++GY++E++ LFE M+ + PN +T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
I+ VLFACSH+GL++ G YF SM+ +Y I P HY C++D+L ++G+L +A +N M
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
EPD+ W +LL C+ +N +AE A K + L E Y LLSNIYA++ +W
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R M ++G++K GCSW+EV Q+H F + +P+
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQ 519
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 79/417 (18%)
Query: 56 RYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG-MP 114
R R L + + SL+++ + D + ++ C+ N + GNL F+G P
Sbjct: 35 RLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP 94
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
V+ LI+ ++K + ++ F++ P +NVISWT I + + +AL+L +
Sbjct: 95 MMFLVN--VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVL 152
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+L V+PN T+SS+ ++C ++D R+ + I K G E V V ++LI + K+GE
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 235 -------------------------------VDLARSVFDRMEK---------------- 247
D+A +F RM++
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 248 ---------------------RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+D++ ++D++ + G L +A R+F++M ER+ ++WS
Sbjct: 270 CTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI- 345
MI+ Q+GY +EA +LF +M KPN VL A + L G + + K+
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 346 GIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
GI+ +IDL K G+ D +L+ + E D V+W +++G + M
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD---AVTWRTLLGACRVQRNM 443
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 44/269 (16%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ +T+S ++ S ++ +G + + G +FL L + Y K + + ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS------ 563
D+MP +N ISWT M+ ++ ++++ L M + ++ PN T SVL +C+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 564 --HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
H G++ +GL E ++ + ++D+ ++ G +A + M D+
Sbjct: 180 MLHCGIIKEGL------ESDVFVR------SALIDVFAKLGEPEDALSVFDEM-VTGDAI 226
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W S++ G +A K + + AG++ S
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKR------AGFIAEQATLTSV-------------- 266
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
LR G + +E+ Q H K D +
Sbjct: 267 ---LRACTGLALLELGMQAHVHIVKYDQD 292
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 320/656 (48%), Gaps = 108/656 (16%)
Query: 67 LGSRKSLEANEIVKDLNG---------FDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
LG+ S+EA E K ++ D+++ N ++ + G+LE+A+RLF+ M R
Sbjct: 128 LGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRR 187
Query: 118 EV-SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
V SW A+I+ + + G EE++ +E
Sbjct: 188 SVSSWNAMIAAYAQSGHFEEAIRLYE---------------------------------- 213
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
+ V+P+ TF+S+ AC+ + G + LI G E +S+ N+L+T+ + +D
Sbjct: 214 DMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLD 273
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A +F R+ +RDVVSW S MIA + ++
Sbjct: 274 DAAKIFQRLPRRDVVSW-------------------------------SAMIAAFAETDL 302
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+EA + +M +PN F+ VL A AS+ LR+G VH +L G + + A
Sbjct: 303 FDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTA 362
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
L+DLY+ G + R +FD I +D W +IGGY G EL+ M
Sbjct: 363 LVDLYTSYGSLDEARSLFDQIENRDEG---LWTVLIGGYSKQGHRTGVLELYREMKNTTK 419
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
V + II +S V+ A AS+ + + H
Sbjct: 420 VPATKII------------------------------YSCVISACASLGAFADARQAHSD 449
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
I G D L T+L + Y++ G++ES+R+VFD+M ++ ++WT ++ G A+ G +
Sbjct: 450 IEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLA 509
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
+ L++EME P+ELT + VL+ACSH+GL ++G + F S++ Y + PN HY+C++D
Sbjct: 510 LGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIID 569
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG 656
+LSR+GRLS+AE+ IN+MP EP+ W+SLL + +K+ + A A + KL PA
Sbjct: 570 LLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPAS 629
Query: 657 YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YVLLSN++A G +VR M +G++K G SW+EV +Q+H F + +P+
Sbjct: 630 YVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPR 685
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/578 (25%), Positives = 260/578 (44%), Gaps = 90/578 (15%)
Query: 99 QWGNLEEAQRLFD---GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
Q +LE +++ D G N ++ + K G V + F+ +N SW +
Sbjct: 36 QCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSM 95
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-G 214
+ + QNG AL L+ ++ ++PN V ++++ ACA I G ++ I G
Sbjct: 96 LTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKG 152
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIF 273
+ V + NSL+T+ K G ++ A+ +F+RM +R V SW ++ + + G EA R++
Sbjct: 153 LKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLY 212
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
++M +P+ F+ VLSA ++L L
Sbjct: 213 EDM----------------------------------DVEPSVRTFTSVLSACSNLGLLD 238
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G +HA + G E D+ + NAL+ +Y++C D +F + +D VVSW++MI
Sbjct: 239 QGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRD---VVSWSAMIA 295
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
+ E FD +++M L G PN T
Sbjct: 296 AFA-------------------------------ETDLFDEAIEFYSKMQLEGVRPNYYT 324
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
F+SVL A ASV L G+ +H +I+ G+ + GTAL D Y G ++ +R +FD++
Sbjct: 325 FASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 384
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS-VLFACSHSGLVDKGL 572
+++E WTV++ G ++ G+ + L+ EM+ T+ P I S V+ AC+ G
Sbjct: 385 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLG------ 438
Query: 573 KYFNSMEPIYNIKPNGR-----HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ ++ + +I+ +G T +V+M SR G L A + M D+ AW +L+
Sbjct: 439 AFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMS-SRDTLAWTTLI 497
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
+G + +A K + +L P+ + +YA
Sbjct: 498 AGYAKHGEHGLALGLYKEM-ELEGAEPSELTFMVVLYA 534
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 208/472 (44%), Gaps = 87/472 (18%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
N ++ K G V AR FD + +++ SW
Sbjct: 62 NEIVRAYGKCGSVASARVAFDAIARKNDYSW----------------------------- 92
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
M+ Y Q+G+ A L+++M +PN ++ VL A AS++AL G +H+ +
Sbjct: 93 --GSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRI 147
Query: 343 LKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
G++ DV + N+L+ +Y+KCG +D + +F+ + + V SWN+MI Y +G
Sbjct: 148 SGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRR--SVSSWNAMIAAYAQSGHF 205
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EEA L+++M DV P+ TF+SVL A
Sbjct: 206 EEAIRLYEDM----DVE------------------------------PSVRTFTSVLSAC 231
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+++ L++G+ +H I G D+ L AL YA+ ++ + ++F R+P ++ +SW+
Sbjct: 232 SNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWS 291
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS-MEP 580
M+ AE+ E+I + +M+ + PN T SVL AC+ G + G + +
Sbjct: 292 AMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGN 351
Query: 581 IYNIK-PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTYKNEQI 638
Y I NG T +VD+ + G L EA + + D W L+ G K +
Sbjct: 352 GYKITLVNG---TALVDLYTSYGSLDEARSLFDQIE-NRDEGLWTVLIGGYSKQGHRTGV 407
Query: 639 AE--RAVKNLWKLAEEHPAGYVLLSNIY---ASAGRWIDAMNVRKLMTEKGL 685
E R +KN K+ PA ++ S + AS G + DA + G+
Sbjct: 408 LELYREMKNTTKV----PATKIIYSCVISACASLGAFADARQAHSDIEADGM 455
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 145/273 (53%), Gaps = 10/273 (3%)
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D +C + + R + D I A+V N ++ YG G + A+ FD + ++ND S
Sbjct: 32 DALRQCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYS 91
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W ++++ Y ++ + ++ M L PN +++VL A AS+ +LE+GK +H +I
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRMDLQ---PNPVVYTTVLGACASIEALEEGKAIHSRIS 148
Query: 479 KL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLAESGYAKES 536
G DV L +L YAK G +E ++R+F+RM + + SW M+ A+SG+ +E+
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
I L+E+M+ + P+ T SVL ACS+ GL+D+G K +++ + + ++
Sbjct: 209 IRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRK-IHALISSRGTELDLSLQNALLT 264
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
M +R L +A +P D +W+++++
Sbjct: 265 MYARCKCLDDAAKIFQRLP-RRDVVSWSAMIAA 296
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 129/285 (45%), Gaps = 42/285 (14%)
Query: 54 KERYLTTRLLIMYLGSRKSLEANEIVKDL---NGFDLVVHN--CMINANIQWGNLEEAQR 108
+ Y T +++ S L A V D NG+ + + N +++ +G+L+EA+
Sbjct: 319 RPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARS 378
Query: 109 LFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
LFD + R+E WT LI G+ K G + G
Sbjct: 379 LFDQIENRDEGLWTVLIGGYSKQGH---------------------------RTGV---- 407
Query: 169 LKLFLKLLESGVKP-NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
L+L+ ++ + P ++ +S + ACA + F I G + SL+
Sbjct: 408 LELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVN 467
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVS 283
+ + G ++ AR VFD+M RD ++WT ++ + + G+ G A ++ EM E +E++
Sbjct: 468 MYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELT 527
Query: 284 WSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALA 327
+ V++ + +G E+ +LF + + Y+ PN + +S ++ L+
Sbjct: 528 FMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLS 572
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 264/458 (57%), Gaps = 39/458 (8%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
V+++++++ L +A ++FD+MP+RN +SW+ MI+ Y++ ++A L M R + +P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N +S VL + + +R +H ++K G+E DVF+ +ALID+++K GE +D
Sbjct: 161 NVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED----- 212
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
A +FD M + + W++II G+ ++ + D+
Sbjct: 213 -----------------------------ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F M +G I ++T +SVL A +A LE G H I+K + D+ L AL D
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVD 301
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K G +E + RVF++M +++ I+W+ M+ GLA++GY++E++ LFE M+ + PN +T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
I+ VLFACSH+GL++ G YF SM+ +Y I P HY C++D+L ++G+L +A +N M
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
EPD+ W +LL C+ +N +AE A K + L E Y LLSNIYA++ +W
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R M ++G++K GCSW+EV Q+H F + +P+
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQ 519
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 79/417 (18%)
Query: 56 RYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG-MP 114
R R L + + SL+++ + D + ++ C+ N + GNL F+G P
Sbjct: 35 RLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP 94
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
V+ LI+ ++K + ++ F++ P +NVISWT I + + +AL+L +
Sbjct: 95 MMFLVN--VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVL 152
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+L V+PN T+SS+ ++C ++D R+ + I K G E V V ++LI + K+GE
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 235 -------------------------------VDLARSVFDRMEK---------------- 247
D+A +F RM++
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 248 ---------------------RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+D++ ++D++ + G L +A R+F++M ER+ ++WS
Sbjct: 270 CTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI- 345
MI+ Q+GY +EA +LF +M KPN VL A + L G + + K+
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 346 GIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
GI+ +IDL K G+ D +L+ + E D V+W +++G + M
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD---AVTWRTLLGACRVQRNM 443
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 44/269 (16%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ +T+S ++ S ++ +G + + G +FL L + Y K + + ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS------ 563
D+MP +N ISWT M+ ++ ++++ L M + ++ PN T SVL +C+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 564 --HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
H G++ +GL E ++ + ++D+ ++ G +A + M D+
Sbjct: 180 MLHCGIIKEGL------ESDVFVR------SALIDVFAKLGEPEDALSVFDEM-VTGDAI 226
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W S++ G +A K + + AG++ S
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKR------AGFIAEQATLTSV-------------- 266
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
LR G + +E+ Q H K D +
Sbjct: 267 ---LRACTGLALLELGMQAHVHIVKYDQD 292
>gi|297812081|ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319761|gb|EFH50183.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 939
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 202/660 (30%), Positives = 344/660 (52%), Gaps = 38/660 (5%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L S N V GR +HG ++K+G ++ +L MY R ++A + + D
Sbjct: 302 LGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFRAHAKLDS 361
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
N M++ + L +A +LFD MPER+ VS+T LI G+ ++ +
Sbjct: 362 ASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNNQ-------------- 407
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
W+ EA++LF ++ G+ NEVT +++ AC+ + +
Sbjct: 408 ----WS-------------EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCKMLH 450
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
L K + V +L+ + + AR +FD M +R++V+W V+L+ + + G +
Sbjct: 451 SLAIKLNLDDRVFASTNLLLMYCICSCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIE 510
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A+ +FD++ E++ VSW MI + +EA + +M R KP+ +LSA A
Sbjct: 511 QAKELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRRGMKPSEVMMVDLLSASA 570
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
G+ +H ++K+G + F+ +I Y+ K F+ V+ H+ S
Sbjct: 571 RSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAVSNNLKLALQQFEVSVKD---HIAS 627
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
N++I G+ NG +E+A+E+FD ++ SW+A++SGY + L +F EM+ S +
Sbjct: 628 RNALIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSSQ 687
Query: 448 I-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
+ P+ T SV A +S+ SLE+GK H + + P + L A+ + YAK G IE++
Sbjct: 688 VKPDAITMVSVFSAISSLGSLEEGKRAHEYLNRSSIPPNDNLIAAIINMYAKCGSIETAL 747
Query: 507 RVFDRMPD--KNEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+F + + + IS W ++ G A G+AK +++L+ +++ I PN +T + VL AC
Sbjct: 748 NIFHQTKNIFSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 807
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV+ G YF SM+ + I+P+ +HY C+VD+L +SG+L EA++ I +MP + D W
Sbjct: 808 HAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKSGKLEEAKEMIKNMPVKADVMIW 867
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
LLS + + N +IAE A L + H V+LSN+YA AGRW D VR++M +
Sbjct: 868 GMLLSASRIHGNVEIAELAAAELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREVMRTR 927
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 255/524 (48%), Gaps = 48/524 (9%)
Query: 164 FSFEALKLFLKLLESGVKPN-EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
FSF +L F SG N E S +CA ND G + G + K+G + + +C
Sbjct: 277 FSFPSLTHFDF---SGESSNIERALVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFIC 333
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
NS++ + K + A SVF K D S+ +++D + LG+A ++FD MPER+ V
Sbjct: 334 NSVLNMYAKCRLLVDAESVFRAHAKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCV 393
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
S++ +I Y Q+ EA LFR+M N + V+SA + L + +H+
Sbjct: 394 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCKMLHSLA 453
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+K+ ++ VF S L+ +Y C KD R +FD + E++ +V+WN M+ GY G +E
Sbjct: 454 IKLNLDDRVFASTNLLLMYCICSCLKDARKLFDEMPERN---LVTWNVMLNGYSKAGLIE 510
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
+AKELFD + +++ VSW +I G L Q D + EML G P++ +L ASA
Sbjct: 511 QAKELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRRGMKPSEVMMVDLLSASA 570
Query: 463 SVASLEKGKDLHGKIIKLGFP-YDVFLGT------------------------------A 491
KG LHG I+K+GF YD T A
Sbjct: 571 RSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAVSNNLKLALQQFEVSVKDHIASRNA 630
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-ITP 550
L + K+G +E +R VFD+ DK+ SW M+ G A+S + +++LF EM +S + P
Sbjct: 631 LIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSSQVKP 690
Query: 551 NELTILSVLFACSHSGLVDKGLK---YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ +T++SV A S G +++G + Y N +I PN +++M ++ G + A
Sbjct: 691 DAITMVSVFSAISSLGSLEEGKRAHEYLNR----SSIPPNDNLIAAIINMYAKCGSIETA 746
Query: 608 EDFINSMP--FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKL 649
+ + F + W +++ G T+ + ++A +L L
Sbjct: 747 LNIFHQTKNIFSSTISPWNAIICGSATHGHAKLALDLYSDLQSL 790
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/431 (37%), Positives = 255/431 (59%), Gaps = 8/431 (1%)
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL----RSGMHVHAHV 342
+I + SG P+ A L+ + R P +L +LA A+ R + VHAH
Sbjct: 59 LIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAHA 118
Query: 343 LKIGIEKDVFISNALIDLYSKC-GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+++G+ + ++NALI +++ G D L+ + D + ++N++I + G++
Sbjct: 119 VRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDAS---TFNTLITAHARAGRV 175
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
+A+ LFD MP+RN VSWSA+++GY++ VF++M G P+ + VL A
Sbjct: 176 ADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAAC 235
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
A + +LE+GK +HG + VFLGTAL D YAK G+++ VF+ M DKN ++WT
Sbjct: 236 AQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWT 295
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M++GLA G +S+ LF +ME + + P+++ + L AC+H+GLVDKG + FNSM
Sbjct: 296 TMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNN 355
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
Y IKP HY C+VD+L+R+G LSEA D + MP +PD+ W +L++GC+ +KN ++AE
Sbjct: 356 YGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEY 415
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
+K+ +L + YVLL NIY+++GR A +R LM EKG+ K+ GCS VE++ +H
Sbjct: 416 VIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIH 475
Query: 702 FFFQKTDHNPK 712
F +P+
Sbjct: 476 QFIVGDLSHPR 486
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 172/380 (45%), Gaps = 41/380 (10%)
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA----EINDFRLGLSVFGL 209
A I +G AL L+ L+ +G+ P T S+ K+ A RL L+V
Sbjct: 58 ALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAH 117
Query: 210 IFKAGFEKHVSVCNSLITLSLKM-GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ G + V N+LI + + G + A + D ++ ++ G + +
Sbjct: 118 AVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVAD 177
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +FDEMPERN VSWS M+ Y Q+G EA +F QM +P+ + VL+A A
Sbjct: 178 ARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQ 237
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L AL G VH ++ I VF+ AL+D+Y+KCGE + G VF+ + +K+ V++W
Sbjct: 238 LGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKN---VLAW 294
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+MI G ++G+ ++ LF M SG
Sbjct: 295 TTMIKGLAMHGRGSDSLTLFSQMES-------------------------------SGVK 323
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ F LCA ++KG++L ++ G + + D A++G + +R
Sbjct: 324 PDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARD 383
Query: 508 VFDRMPDK-NEISWTVMVRG 526
+ ++MP K + + W ++ G
Sbjct: 384 MVEKMPMKPDALIWGALMAG 403
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 156/333 (46%), Gaps = 23/333 (6%)
Query: 43 LHGHLIKTGIHKERYLTTRLL------IMYLGSRK---SLEANEIVKDLNGFDLVVHNCM 93
L+ HLI+ G+ + LL G+R+ ++ A+ + L GF L+V+N +
Sbjct: 75 LYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAHAVRLGLAGF-LLVNNAL 133
Query: 94 INANIQW-GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
I + G L +A L + ++ LI+ + GRV ++ F+ P +N +SW
Sbjct: 134 IRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSW 193
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
+A + G+VQ G EAL +F ++ GV+P++ + ACA++ G V G +
Sbjct: 194 SAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKA 253
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
V + +L+ + K GEV L VF+ M+ ++V++WT ++ G ++ +
Sbjct: 254 NNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTL 313
Query: 273 FDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALA 327
F +M + +++++ + +G ++ LF M Y KP + ++ LA
Sbjct: 314 FSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLA 373
Query: 328 SLKALRSGMHVHAH--VLKIGIEKDVFISNALI 358
R+G+ A V K+ ++ D I AL+
Sbjct: 374 -----RNGLLSEARDMVEKMPMKPDALIWGALM 401
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/581 (31%), Positives = 305/581 (52%), Gaps = 37/581 (6%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G + + F++ N W I G+ + F +++ + + + +F
Sbjct: 100 GDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFAL 159
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
KAC + + +G++V +I+K GF+ + V N LI
Sbjct: 160 KACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLI------------------------- 194
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
++E G LG AR++FDE ++ V+W+ MI Y ++ + +EA LF M
Sbjct: 195 ------QNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSD 248
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
KPN +LSA + G +H H+ + I + + NA++D+Y KCG R
Sbjct: 249 VKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAR 308
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+F+++ +DV SW S++ GY NG + A++LFD MP+RN VSW+A+I+GY ++ Q
Sbjct: 309 EIFNNMERRDV---FSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQ 365
Query: 432 FDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLEKGKDLH-GKIIKLGFPYDVFLG 489
+F+ M+ + G +P + T VL AS + LE G+++H + K+G + L
Sbjct: 366 PMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILK 425
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
A+ D YAK G I+++ ++F MP+KN +SW M+ A G+AK+++ LF++M + +
Sbjct: 426 NAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLK 485
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+ +T + VL ACS+ G V +G +F SME + ++P HY C+VD+LSR G L EA +
Sbjct: 486 PDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYE 545
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGR 669
I+ MP E W +LL C+ + N ++A+ A + L +L E Y LL+NI A +
Sbjct: 546 LISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKK 605
Query: 670 WIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH-FFFQKTDH 709
W D VR++M E+G++K G S +E+ + H F T H
Sbjct: 606 WKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADTSH 646
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 170/291 (58%), Gaps = 5/291 (1%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
LI +++ G + + F+ + ++V++WT I G+ +N + EA+ LF +L S VKP
Sbjct: 192 GLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKP 251
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
NEVT ++ AC++ D +G ++ I + +++ N+++ + +K G + AR +F
Sbjct: 252 NEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIF 311
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ ME+RDV SWT +L+ + + GDLG AR++FDEMPERN VSW+ MIA Y+Q+ P EA
Sbjct: 312 NNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALE 371
Query: 303 LFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHA-HVLKIGIEKDVFISNALIDL 360
LF M P VLSA L L G +H HV KIGI+ + + NA++D+
Sbjct: 372 LFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDM 431
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
Y+KCG +F S+ EK+ +VSWNSMI Y G ++A LFD M
Sbjct: 432 YAKCGSIDAAAKLFHSMPEKN---LVSWNSMISAYASYGHAKKALTLFDQM 479
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 149/298 (50%), Gaps = 10/298 (3%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N M++ ++ G L A+ +F+ M R+ SWT+L++G+ K+G + + F+ P +N++
Sbjct: 292 NAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIV 351
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGLSVF-G 208
SW A I G+ QN EAL+LF +++ G+ P E T + A ++ +G +
Sbjct: 352 SWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCN 411
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ K G + + + N+++ + K G +D A +F M ++++VSW ++ + G +
Sbjct: 412 HVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKK 471
Query: 269 ARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
A +FD+M + + +++ +++ + G+ E F M + +P ++ ++
Sbjct: 472 ALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMV 531
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L+ + L+ + + ++ +E AL+D K G + +L + ++E D
Sbjct: 532 DLLSRVGLLKEAYEL---ISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELD 586
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 11/332 (3%)
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F F+ + +SF P ++ L+ L S + L + K +VFISN + +
Sbjct: 5 FSSFQNPSHFSFFP----LNLALNILHSFRPLSTSSSPGKP--KWNSLSNVFISNPTLLI 58
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL---NGQMEEAKELFDNMPKRNDV 417
C + + I + + + S + + +G + A +FD N
Sbjct: 59 LQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCF 118
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
W+ +I GY + + F+ F +M+ + + +F L A A G +H I
Sbjct: 119 FWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVI 178
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
K GF D+F+ L Y ++G + +R++FD K+ ++WT M+ G A + + E+I
Sbjct: 179 WKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAI 238
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF M + + PNE+T++++L ACS G + G K + +I + ++DM
Sbjct: 239 ALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMG-KTLHEHIRRKDITCSLNLLNAMLDM 297
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ G L+ A + N+M D +W SLL+G
Sbjct: 298 YVKCGCLTTAREIFNNME-RRDVFSWTSLLNG 328
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 86/215 (40%), Gaps = 62/215 (28%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L++ N +++ + G+++ A +LF MPE+N VSW ++IS + +G +
Sbjct: 422 LILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAK----------- 470
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+AL LF +++ SG+KP+ +TF + AC+
Sbjct: 471 --------------------KALTLFDQMIGSGLKPDHITFIGVLSACS----------- 499
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
GF +S + + F KR+ + ++D+ +G L
Sbjct: 500 -----YGGF------------VSEGQAHFESMENCFGVEPKRE--HYACMVDLLSRVGLL 540
Query: 267 GEARRIFDEMP-ERNEVSWSVMIARYNQSGYPEEA 300
EA + MP E +E W ++ + G E A
Sbjct: 541 KEAYELISRMPMEASEGGWGALLDACRKHGNVEMA 575
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 198/617 (32%), Positives = 314/617 (50%), Gaps = 74/617 (11%)
Query: 93 MINANIQWGNLEEAQRLFDGMP---ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
M+ +QW Q+ G P + + T L+ + + G ++ F+ P ++V
Sbjct: 18 MMKNYLQWAQNTPTQK--SGTPFNAKGTSILATDLLKSYFERGLTSQARNLFDEMPERDV 75
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFSSICKACAEINDFRLGLSVFG 208
++WT I G+ +A +F+ ++++G PN T SS+ KAC + G V G
Sbjct: 76 VAWTTMISGYTHCNEYTQAWSVFVDMVKNGNDPPNAFTISSVLKACKGMKRVFCGRLVHG 135
Query: 209 LIFKAGF-EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG-DL 266
L K F E + V N+L +D++ G +
Sbjct: 136 LAIKRRFMEGFIYVDNAL-------------------------------MDMYASCGVGM 164
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A +F ++ E+N VSW+ +IA Y G A ++FR+M N SI + A
Sbjct: 165 RDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRAC 224
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
AS+ + G +H V+K G E D+ ++N+++D+Y +CG
Sbjct: 225 ASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCG--------------------- 263
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+ EA + F++M +++ ++W+ +I+GY + F +F++M G
Sbjct: 264 -------------CLSEANKYFNDMTEKDLITWNTLIAGYERSDSIEPFF-IFSQMESEG 309
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN TF+S++ A A+ A+L+ G+ +HG I + G ++ L AL D YAK G+I S+
Sbjct: 310 FSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQ 369
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+ F M N +SWT M+ G GY KE++ LF+EM ++ I P+++ ++VL ACSH+G
Sbjct: 370 KNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAG 429
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LVD+GL+Y N M Y+IKPN Y CVVD+L R GR+ +A I SMPF D + W +L
Sbjct: 430 LVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGAL 489
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L CK + ++ + A K L YV+LSNIYA+ G+W +A +RKLM G R
Sbjct: 490 LGACKAHNFSRLGKLAAKKALALRPNMVETYVMLSNIYAAEGKWGEAARMRKLMKRAGCR 549
Query: 687 KSGGCSWVEVRNQVHFF 703
K G SW+EVRNQV+ F
Sbjct: 550 KVAGRSWIEVRNQVYSF 566
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 127/529 (24%), Positives = 213/529 (40%), Gaps = 125/529 (23%)
Query: 1 MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
+ + R+LF PE ++ ++ T N Q ++ ++K G T
Sbjct: 59 LTSQARNLFDEMPERDVVAWTT----MISGYTHCNEYTQAWSVFVDMVKNGNDPPNAFTI 114
Query: 61 RLLIMYLGSRKSLEANEIVKDL-------NGFDLVVHNCMINANIQWG-NLEEAQRLFDG 112
++ K + +V L GF + V N +++ G + +A +F
Sbjct: 115 SSVLKACKGMKRVFCGRLVHGLAIKRRFMEGF-IYVDNALMDMYASCGVGMRDACVVFHD 173
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
+ E+N VSWT LI+G+ G NG AL++F
Sbjct: 174 IKEKNVVSWTTLIAGYTHRG-----------------------------NG--NRALQIF 202
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
++L GV N + S +ACA I G + + K GFE + V NS++ + +
Sbjct: 203 REMLLDGVALNPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRC 262
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
G + A F+ M ++D++ +W+ +IA Y
Sbjct: 263 GCLSEANKYFNDMTEKDLI-------------------------------TWNTLIAGYE 291
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+S E F +F QM F PN F+ +++A A+ AL+ G VH + + G++ ++
Sbjct: 292 RSD-SIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLE 350
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
++NALID+Y+KCG D + F E ++VSW SM+ GYG +G +EA ELFD
Sbjct: 351 LANALIDMYAKCGNIIDSQKNFS---EMSCTNLVSWTSMMIGYGTHGYGKEAVELFD--- 404
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG-- 470
EM+ SG P++ F +VL A + +++G
Sbjct: 405 ----------------------------EMVRSGIRPDQVVFMAVLHACSHAGLVDQGLR 436
Query: 471 ------KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
D H K P G + D + G +E + ++ MP
Sbjct: 437 YINCMINDYHIK------PNQEIYG-CVVDLLGRPGRVEDAYQLIRSMP 478
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 129/310 (41%), Gaps = 66/310 (21%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL V N +++ + G L EA + F+ M E++ ++W LI+G +ER+
Sbjct: 248 DLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAG-------------YERSD 294
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
S E +F ++ G PN TF+S+ ACA + G
Sbjct: 295 -------------------SIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQ 335
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V G IF+ G + ++ + N+LI + K G + ++ F M ++VSWT
Sbjct: 336 VHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWT----------- 384
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
S+MI Y GY +EA LF +M R +P+ F VL A
Sbjct: 385 -------------------SMMIG-YGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHA 424
Query: 326 LASLKALRSGM-HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ + G+ +++ + I+ + I ++DL + G +D + S+ +A
Sbjct: 425 CSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSM--PFMAD 482
Query: 385 VVSWNSMIGG 394
W +++G
Sbjct: 483 ESVWGALLGA 492
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 135/343 (39%), Gaps = 51/343 (14%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
++NP S + + C I SQN GR +H +IK G + +T +L MY
Sbjct: 211 ALNPH-SISIAVRAC----ASIGSQNF---GRQIHTAVIKHGFESDLPVTNSILDMYCRC 262
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEE------------------------ 105
EAN+ D+ DL+ N +I + ++E
Sbjct: 263 GCLSEANKYFNDMTEKDLITWNTLIAGYERSDSIEPFFIFSQMESEGFSPNCFTFTSLVA 322
Query: 106 ----------AQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
Q++ G+ R N ALI + K G + +S F N++S
Sbjct: 323 ACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVS 382
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG-LI 210
WT+ + G+ +G+ EA++LF +++ SG++P++V F ++ AC+ GL +I
Sbjct: 383 WTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMI 442
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFI--EMGDLG 267
+ + + ++ L + G V+ A + M D W +L LG
Sbjct: 443 NDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLG 502
Query: 268 EARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTR 309
+ N V VM++ Y G EA R+ + M R
Sbjct: 503 KLAAKKALALRPNMVETYVMLSNIYAAEGKWGEAARMRKLMKR 545
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 256/447 (57%), Gaps = 34/447 (7%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L +A +FD M R+ VSWSVM+ + + G F FR++ R +P+ V+ A
Sbjct: 110 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRA 169
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
LK L+ G +H V K G++ D F+ AL+D+Y KC E +D R
Sbjct: 170 CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF------------- 216
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
LFD M +R+ V+W+ +I GY E + + +F +M
Sbjct: 217 ---------------------LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE 255
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G +P+K +V+ A A + ++ K + + I + F DV LGTA+ D YAK G +ES+
Sbjct: 256 GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESA 315
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R +FDRM +KN ISW+ M+ G +++++LF M + + P+++T+ S+L+ACSH+
Sbjct: 316 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHA 375
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV++GL++F+SM Y+++ + +HYTCVVD+L R+GRL EA I SM E D W +
Sbjct: 376 GLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGA 435
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
L C+T+K+ +AE+A +L +L ++P YVLLSNIYA+AGRW D +R LM+++ L
Sbjct: 436 FLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRL 495
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K+ G +W+EV N+ H F +P+
Sbjct: 496 KKTPGWTWIEVDNKSHQFSVGDTTHPR 522
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/447 (36%), Positives = 258/447 (57%), Gaps = 34/447 (7%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L +A +FD M R+ VSWSVM+ + + G F FR++ R +P+ V+ A
Sbjct: 786 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRA 845
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
LK L+ G +H V K G++ D F+ AL+D+Y KC E
Sbjct: 846 CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCRE------------------- 886
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+E+A+ LFD M +R+ V+W+ +I GY E + +F++M
Sbjct: 887 ---------------IEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREE 931
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G +P+K +V+ A A + ++ K + + I + F DV LGTA+ D +AK G +ES+
Sbjct: 932 GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESA 991
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R +FDRM +KN ISW+ M+ G +++++LF M ++ I PN++T++S+L+ACSH+
Sbjct: 992 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 1051
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV++GL++F+ M Y+++ + +HYTCVVD+L R+GRL EA I SM E D W +
Sbjct: 1052 GLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGA 1111
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
L C+T+K+ +AE+A +L +L ++P Y+LLSNIYA+AGRW D +R LM+++ L
Sbjct: 1112 FLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRL 1171
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K G +W+EV N+ H F +P+
Sbjct: 1172 KKIPGWTWIEVDNKSHQFSVGDTTHPR 1198
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 208/462 (45%), Gaps = 73/462 (15%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
AQ GM E N V LI + + ++++ F+ ++ +SW+ + GF + G
Sbjct: 82 HAQASVHGMLE-NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD 140
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
F +L+ G +P+ T + +AC ++ + ++G + +++K G + VC +
Sbjct: 141 YINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAA 200
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ + +K E++ AR +FD+M++RD+V+WTV++ + E G E+ +F++M E V
Sbjct: 201 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV-- 258
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
P+ V+ A A L A+ + ++ +
Sbjct: 259 -----------------------------PDKVAMVTVVFACAKLGAMHKARIIDDYIQR 289
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+ DV + A+ID+Y+KCG + R +FD + EK+ V+SW++MI YG +GQ +A
Sbjct: 290 KKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN---VISWSAMIAAYGYHGQGRKA 346
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+LF ML SG +P+K T +S+L A +
Sbjct: 347 LDLFPM-------------------------------MLSSGMLPDKITLASLLYACSHA 375
Query: 465 ASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTV 522
+E+G + + DV T + D ++G ++ + ++ M +K+E W
Sbjct: 376 GLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGA 435
Query: 523 MV---RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ R + A+++ E++ S P +LS ++A
Sbjct: 436 FLGACRTHKDVVLAEKAATSLLELQ--SQNPGHYVLLSNIYA 475
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 207/481 (43%), Gaps = 103/481 (21%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+L+V N ++ + L++A LFDGM R+ VSW+ ++
Sbjct: 769 NLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG------------------- 809
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
GF + G F +L+ G +P+ T + +AC ++ + ++G
Sbjct: 810 ------------GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL 857
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ +++K G + VC +L+ + K E++ AR +FD+M +RD+V+WTV++ + E G+
Sbjct: 858 IHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGN 917
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
E+ +FD+M E V P+ V+ A
Sbjct: 918 ANESLVLFDKMREEGVV-------------------------------PDKVAMVTVVFA 946
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L A+ + ++ + + DV + A+ID+++KCG + R +FD + EK+ V
Sbjct: 947 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN---V 1003
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+SW++MI YG +GQ +A +LF ML S
Sbjct: 1004 ISWSAMIAAYGYHGQGRKALDLFPM-------------------------------MLRS 1032
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIES 504
G +PNK T S+L A + +E+G + + DV T + D ++G ++
Sbjct: 1033 GILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDE 1092
Query: 505 SRRVFDRMP-DKNEISWTVMV---RGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+ ++ M +K+E W + R + A+++ E++ + P +LS ++
Sbjct: 1093 ALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQN--PGHYILLSNIY 1150
Query: 561 A 561
A
Sbjct: 1151 A 1151
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 135/246 (54%), Gaps = 2/246 (0%)
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
++V N +I Y +++A LFD M R+ VSWS ++ G+ + + F F E++
Sbjct: 93 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 152
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G P+ T V+ A + +L+ G+ +H + K G D F+ AL D Y K +IE
Sbjct: 153 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIE 212
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+R +FD+M +++ ++WTVM+ G AE G A ES+ LFE+M + + P+++ +++V+FAC+
Sbjct: 213 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 272
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
G + K + + + + T ++DM ++ G + A + + M E + +W
Sbjct: 273 KLGAMHKA-RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVISW 330
Query: 624 ASLLSG 629
+++++
Sbjct: 331 SAMIAA 336
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 132/241 (54%), Gaps = 2/241 (0%)
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N ++ Y +++A LFD M R+ VSWS ++ G+ + + F F E++ G
Sbjct: 774 NKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 833
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ T V+ A + +L+ G+ +H + K G D F+ AL D Y K +IE +R +
Sbjct: 834 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 893
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD+M +++ ++WTVM+ G AE G A ES+ LF++M + + P+++ +++V+FAC+ G +
Sbjct: 894 FDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 953
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
K + + + + T ++DM ++ G + A + + M E + +W+++++
Sbjct: 954 HKA-RTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIA 1011
Query: 629 G 629
Sbjct: 1012 A 1012
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 172/387 (44%), Gaps = 63/387 (16%)
Query: 47 LIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN---GFDLVVHNC--MINANIQWG 101
LI+ G + Y T +I K+L+ ++ + G DL C +++ ++
Sbjct: 151 LIRCGARPDNY-TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCR 209
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQ 161
+E+A+ LFD M ER+ V+WT +I G+ + G+ ES+ FE
Sbjct: 210 EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE------------------- 250
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
K+ E GV P++V ++ ACA++ + I + F+ V +
Sbjct: 251 ------------KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVIL 298
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-- 279
++I + K G V+ AR +FDRME+++V+SW+ ++ + G G+ R+ D P
Sbjct: 299 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY---GYHGQGRKALDLFPMMLS 355
Query: 280 -----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALR 333
++++ + ++ + +G EE R F M YS + + ++ V+ L L
Sbjct: 356 SGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLD 415
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL---VFDSIVE---KDVAHVVS 387
+ + + + IEKD + A + C KD L S++E ++ H V
Sbjct: 416 EALKL---IKSMTIEKDEGLWGAFL---GACRTHKDVVLAEKAATSLLELQSQNPGHYVL 469
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKR 414
+++ Y G+ E+ ++ D M +R
Sbjct: 470 LSNI---YANAGRWEDVAKIRDLMSQR 493
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 165/384 (42%), Gaps = 57/384 (14%)
Query: 47 LIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLN---GFDLVVHNC--MINANIQWG 101
LI+ G + Y T +I K+L+ ++ + G DL C +++ +
Sbjct: 827 LIRCGARPDNY-TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR 885
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQ 161
+E+A+ LFD M ER+ V+WT +I G+ + G ES
Sbjct: 886 EIEDARFLFDKMXERDLVTWTVMIGGYAECGNANES------------------------ 921
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
L LF K+ E GV P++V ++ ACA++ ++ I + F+ V +
Sbjct: 922 -------LVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 974
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-- 279
++I + K G V+ AR +FDRME+++V+SW+ ++ + G G+ R+ D P
Sbjct: 975 GTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAY---GYHGQGRKALDLFPMMLR 1031
Query: 280 -----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALR 333
N+++ ++ + +G EE R F M YS + + ++ V+ L L
Sbjct: 1032 SGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLD 1091
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL---VFDSIVEKDVAHVVSWNS 390
+ + + + EKD + A + C KD L S++E + +
Sbjct: 1092 EALKL---IXSMTXEKDEGLWGAFL---GACRTHKDVXLAEKAATSLLELQPQNPGHYIL 1145
Query: 391 MIGGYGLNGQMEEAKELFDNMPKR 414
+ Y G+ E+ ++ D M +R
Sbjct: 1146 LSNIYANAGRWEDVAKIRDLMSQR 1169
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 70/290 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H + K G+ + ++ L+ MY+ R+ +A + + DLV MI +
Sbjct: 179 GRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAE 238
Query: 100 WGNLEEAQRLFDGMPERNEVS--------------------------------------- 120
G E+ LF+ M E V
Sbjct: 239 CGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVIL 298
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TA+I + K G VE + F+R +NVISW+A I + +G +AL LF +L SG+
Sbjct: 299 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGM 358
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
P+++T +S+ AC+ GL F +++
Sbjct: 359 LPDKITLASLLYACSHAGLVEEGLRFFSSMWE---------------------------- 390
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSWSVMIA 289
D + DV +T ++D+ G L EA ++ M E++E W +
Sbjct: 391 --DYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLG 438
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 6/166 (3%)
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+L + + +H + G ++ + L Y+ ++ + +FD M ++ +SW+VMV
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
G A+ G F E+ + P+ T+ V+ AC + G + + + +Y
Sbjct: 810 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG-RLIHHI--VYKFG 866
Query: 586 PNGRHYTC--VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ H+ C +VDM + + +A + M E D W ++ G
Sbjct: 867 LDLDHFVCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMIGG 911
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A + +L + + +H + G ++ + L Y+ ++ + +FD M ++ +S
Sbjct: 68 ALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVS 127
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W+VMV G A+ G F E+ + P+ T+ V+ AC + G + + +
Sbjct: 128 WSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG-RLIHHI- 185
Query: 580 PIYNIKPNGRHYTC--VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
+Y + H+ C +VDM + + +A + M E D W ++ G Y
Sbjct: 186 -VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVMIGG---YAECG 240
Query: 638 IAERAVKNLWKLAEEH--PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
A ++ K+ EE P +++ ++A A + AM+ +++ + RK
Sbjct: 241 KANESLVLFEKMREEGVVPDKVAMVTVVFACAK--LGAMHKARIIDDYIQRK 290
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 262/459 (57%), Gaps = 29/459 (6%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++F ++P+ + ++VMI +QS P A L+ +M R+ K ++ F VL A
Sbjct: 61 AHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTR 120
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA----- 383
L + +G VH VL++G + + N L+ ++KCG+ +FD + DV
Sbjct: 121 LFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSL 180
Query: 384 -----------------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+VSWN MI GY G+ME A+ LFD P ++ VSW+
Sbjct: 181 IAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWN 240
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+I+GY+ +FNEM +G P++ T S+L A A + LE GK +H K++++
Sbjct: 241 AMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEI 300
Query: 481 GF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG AL D YAK G+I+ S VF + DK+ ISW ++ G+A G+ KES++L
Sbjct: 301 SMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSL 360
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F+ M++T I PNE+T + VL ACSH+G +D+G KYF+ M Y I+PN RH C+VDML
Sbjct: 361 FKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLG 420
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G L EA FI+SM EP++ W +LL+ CK + + ++A+ A + L+ + ++H YVL
Sbjct: 421 RAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVL 480
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
+SN+YAS G W A VRKLM + G+ K G S+VE N
Sbjct: 481 MSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVEACN 519
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 201/466 (43%), Gaps = 109/466 (23%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F + P + + I G Q+ A+ L+ ++ VK + TF + KAC +
Sbjct: 65 FAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWV 124
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G +V G++ + GF + V N+L+ K G++++A S+FD K DVV+W+ ++ +
Sbjct: 125 NTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGY 184
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE---------------------- 298
GDL AR++F+EMPER+ VSW+VMI Y + G E
Sbjct: 185 ARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIA 244
Query: 299 ---------EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
+A LF +M R P+ +LSA A L L +G VHA V++I + K
Sbjct: 245 GYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGK 304
Query: 350 -DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
+ NALID+Y+KCG K+ VF SI +KD V+SWNS+I G L+G +E+ LF
Sbjct: 305 LSTLLGNALIDMYAKCGNIKESLDVFWSITDKD---VISWNSVIVGMALHGHGKESLSLF 361
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
M +R + PN+ TF VL A
Sbjct: 362 -KMMQRTKIC------------------------------PNEITFVGVLVAC------- 383
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV-----M 523
+ +G+I+ + FD M + +I + M
Sbjct: 384 ----------------------------SHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCM 415
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
V L +G KE+ + M+ I PN + ++L AC G V+
Sbjct: 416 VDMLGRAGLLKEAAKFIDSMK---IEPNAIIWRTLLAACKVHGDVE 458
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 178/381 (46%), Gaps = 35/381 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK T V G A+HG +++ G + LL+ + A + D D
Sbjct: 114 VLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGD 173
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + +I + G+L+ A++LF+ MPER+ VSW +I+G++K G +E + F+ P
Sbjct: 174 VVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPV 233
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW A I G+V G S +AL+LF ++ +GV P+EVT S+ ACA++ D G V
Sbjct: 234 KDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKV 293
Query: 207 FGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + K ++ N+LI + K G + + VF + +DV+SW ++
Sbjct: 294 HAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVI-------- 345
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+G A G+ +E+ LF+ M R PN F VL A
Sbjct: 346 VGMALH-----------------------GHGKESLSLFKMMQRTKICPNEITFVGVLVA 382
Query: 326 LASLKALRSGM-HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ + G + + IE ++ ++D+ + G K+ DS+ K +
Sbjct: 383 CSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSM--KIEPN 440
Query: 385 VVSWNSMIGGYGLNGQMEEAK 405
+ W +++ ++G +E AK
Sbjct: 441 AIIWRTLLAACKVHGDVELAK 461
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYDV-FLG-------TALTDTYAKSGDIESSRRVFDRMPD 514
++ +L+ K +H +I GF +V FLG T+L A + ++F ++P
Sbjct: 11 TLPNLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQ 70
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
+ + VM+RG ++S +I+L+ EM + + + T VL AC+ V+ G
Sbjct: 71 PDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTG-SA 129
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
+ M N ++ ++ G L+ A + + D AW+SL++G
Sbjct: 130 VHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDD-SCKGDVVAWSSLIAGYARRG 188
Query: 635 NEQIAER 641
+ ++A +
Sbjct: 189 DLKVARK 195
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 299/599 (49%), Gaps = 75/599 (12%)
Query: 109 LFDGMPERNEVSWTALI-SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
FD V++ +L SG +++ R+ F + P + + I G E
Sbjct: 17 FFDPFTASKIVAFCSLQESGSLQYARL-----VFSQIPNPTSYTCNSIIRGCTDKNLHQE 71
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL + +++ G+ P+ TF S+ K+C ++ G + K GF
Sbjct: 72 ALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFAS---------- 118
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
D + +++++ G L AR++FD+M ++ VSW+ M
Sbjct: 119 ---------------------DTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATM 157
Query: 288 IARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
I + Q P EA RLF R M + KPN VL+A A + L +H ++ + G
Sbjct: 158 IGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHG 217
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+ V ++ L+D+Y KCG ++ A++
Sbjct: 218 FGRHVVLNTVLMDVYCKCG----------------------------------CVQLARD 243
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
LFD ++N SW+ +I+G++E ++ +F EM G +K T +S+L A + +
Sbjct: 244 LFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGA 303
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
LE GK LH I K DV LGTAL D YAK G IE++ +VF MP+K+ ++WT ++ G
Sbjct: 304 LELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILG 363
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
LA G A+ ++ F+EM + P+ +T + VL ACSH+G VD+G+ +FNSM Y I+P
Sbjct: 364 LAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQP 423
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
HY +VD+L R+GR++EAE+ I SMP PD LL C+ + N + AERA K L
Sbjct: 424 TIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQL 483
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
++ H YVLLSNIY S+ +W +A R+LM E+G+RK GCS +EV VH F +
Sbjct: 484 LEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVK 542
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 213/514 (41%), Gaps = 109/514 (21%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R +FS P + SY TC +++ T +NL + + ++ G+ +RY L
Sbjct: 42 RLVFSQIPNPT--SY--TCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSL--- 94
Query: 66 YLGSRKSLEANEIVKDLN--GF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
+ R S E +I GF D N ++N G L A+++FD M ++ VSW
Sbjct: 95 FKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSW 154
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GV 180
+I H + ++ EA++LF ++++S V
Sbjct: 155 ATMIG---VHAQWDQPN----------------------------EAVRLFDRMMKSENV 183
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KPNEVT ++ ACA D + + I + GF +HV + L+ + K G V LAR
Sbjct: 184 KPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARD 243
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+FD+ +++++ SW ++++ +E S Y EEA
Sbjct: 244 LFDKAQEKNLFSWNIMINGHVE------------------------------DSNY-EEA 272
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LFR+M K + + +L A L AL G +HA++ K I+ DV + AL+D+
Sbjct: 273 LLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDM 332
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y+KCG + VF + EKD V++W ++I G + GQ E A + FD
Sbjct: 333 YAKCGSIETAIQVFHEMPEKD---VMTWTALILGLAMCGQAENALQYFD----------- 378
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIK 479
EM + G P+ TF VL A + +++G +
Sbjct: 379 --------------------EMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDT 418
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
G + L D ++G I + + MP
Sbjct: 419 YGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 195/477 (40%), Gaps = 68/477 (14%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G+ +H H K G + Y L+ MY + A ++ + +V MI +
Sbjct: 103 EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHA 162
Query: 99 QWGNLEEAQRLFDGMPER-----NEVSWTALIS---------------------GFMKH- 131
QW EA RLFD M + NEV+ +++ GF +H
Sbjct: 163 QWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHV 222
Query: 132 -------------GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
G V+ + F++ +N+ SW I G V++ EAL LF ++
Sbjct: 223 VLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTK 282
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G+K ++VT +S+ AC + LG + I K + V++ +L+ + K G ++ A
Sbjct: 283 GIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETA 342
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQS 294
VF M ++DV++WT ++ G A + FDEM + + +++ ++A + +
Sbjct: 343 IQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHA 402
Query: 295 GYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDV 351
G+ +E F M+ Y +P + ++ L R+G A L + + D
Sbjct: 403 GFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILG-----RAGRIAEAEELIKSMPMAPDQ 457
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK---ELF 408
F+ L+ G + ++E D H ++ + Y + + EEAK EL
Sbjct: 458 FVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELM 517
Query: 409 DNMPKRNDVSWSAI---------ISGYLEHKQFDLVFAVFNEMLL----SGEIPNKS 452
R S I + G H+Q + + +M+ +G +P+KS
Sbjct: 518 AERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKS 574
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTD--TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K +H ++++ G +D F + + + +SG ++ +R VF ++P+ + ++RG
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
+ +E++ ++EM + P+ T S+ +C +S +G K + +
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EG-KQIHCHSTKLGFASDT 120
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
+++M S G L A + M + +WA+++ + A R + K
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKME-DKTVVSWATMIGVHAQWDQPNEAVRLFDRMMK 179
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+E V L N+ + R D V+++
Sbjct: 180 -SENVKPNEVTLVNVLTACARARDLAMVKRI 209
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 196/660 (29%), Positives = 332/660 (50%), Gaps = 132/660 (20%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
I G H H++K+G+ +R + LL +Y F L
Sbjct: 77 IHGLQFHAHVVKSGLETDRNVGNSLLSLY------------------FKL---------- 108
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
++ E +R+FDGM F+K + ISWT+ +
Sbjct: 109 --GPDMRETRRVFDGM--------------FVK-----------------DAISWTSMMS 135
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G+V + +AL++F++++ G++PN+ T SS KAC E+ + RLG G++ GFE
Sbjct: 136 GYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFE- 194
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
N +I+ +L + + K V +ARR+FDEMP
Sbjct: 195 ----WNHVISSTL---------AYMYGVNKEPV-----------------DARRVFDEMP 224
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGM 336
E + + W+ +++ ++++ EEA LF M R P+ S F VL+A +L+ L+ G
Sbjct: 225 EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK 284
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H ++ GI +V + ++L+D+Y G
Sbjct: 285 EIHGKLITNGIGSNVVVESSLLDMY----------------------------------G 310
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
+G + EA+++F+ MP++N VSWSA++ GY ++ + + +F EM E + F +
Sbjct: 311 KSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREM----EEKDLYCFGT 366
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
VL A A +A++ GK++HG+ ++ G +V + +AL D Y KSG I+ + RV+ +M +N
Sbjct: 367 VLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRN 426
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
I+W M+ LA++G +E+++ F +M K I P+ ++ ++VL AC H+GLV++G YF
Sbjct: 427 MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFA 486
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKN- 635
M Y IKP HY+C++D+L R+G EAE+ ++ D++ W LL C +
Sbjct: 487 LMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLGPCAANTDA 546
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
IAER K + +L ++ YVLLSN+Y + GR DA+ +RKLM +G+ K+ G SW++
Sbjct: 547 SSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRRGVAKTVGQSWID 606
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 39/349 (11%)
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G +A R+ ++ ++ +L + + G+ HAHV+K G+E D +
Sbjct: 39 GQLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVG 98
Query: 355 NALIDLYSKCG-ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
N+L+ LY K G + ++ R VFD + KD +SW SM
Sbjct: 99 NSLLSLYFKLGPDMRETRRVFDGMFVKD---AISWTSM---------------------- 133
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
+SGY+ K+ VF EM+ G PNK T SS + A + + G+
Sbjct: 134 ---------MSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCF 184
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
HG +I GF ++ + + L Y + + +RRVFD MP+ + I WT ++ +++
Sbjct: 185 HGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 244
Query: 534 KESINLFEEMEK-TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
+E++ LF M + + P+ T +VL AC + + +G K + I N +
Sbjct: 245 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG-KEIHGKLITNGIGSNVVVES 303
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTYKNEQIAE 640
++DM +SG + EA N MP + +W++LL G C+ ++E+ E
Sbjct: 304 SLLDMYGKSGSVREARQVFNGMP-RKNIVSWSALLGGYCQNGEHEKAIE 351
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/598 (31%), Positives = 305/598 (51%), Gaps = 69/598 (11%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E + +LIS K G + ++ F+ ++ +SW + I G V NG EA + F
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ +G KP TF+S+ K+CA + + L + K+G + +V +L+ K E
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+D A S+F M V VSW+ MI+ Y Q+
Sbjct: 355 IDDAFSLFSLMHGVQSV------------------------------VSWTAMISGYLQN 384
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G ++A LF M R KPN +S +L+ ++ +HA V+K EK +
Sbjct: 385 GDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI----SEIHAEVIKTNYEKSSSVG 440
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
AL+D + K G D VF+ I KDV
Sbjct: 441 TALLDAFVKIGNISDAVKVFELIETKDV-------------------------------- 468
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA-SASVASLEKGKDL 473
++WSA+++GY + + + +F+++ G PN+ TF S++ A +A AS+E+GK
Sbjct: 469 --IAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF 526
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H IKL + + ++L YAK G+IES+ +F R +++ +SW M+ G A+ G A
Sbjct: 527 HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQA 586
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
K+++ +FEEM+K ++ + +T + V+ AC+H+GLV KG YFN M ++I P HY+C
Sbjct: 587 KKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSC 646
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
++D+ SR+G L +A D IN MPF P + W +L+ + ++N ++ + A + + L +H
Sbjct: 647 MIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQH 706
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A YVLLSNIYA+AG W + +NVRKLM ++ ++K G SW+EV+N+ + F +P
Sbjct: 707 SAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHP 764
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/607 (26%), Positives = 268/607 (44%), Gaps = 117/607 (19%)
Query: 47 LIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVH----NCMINANIQWGN 102
L ++G+ + Y + +L + GS ++ LV H N +++ + GN
Sbjct: 93 LYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGN 152
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
+ + +R+FD M +R+ VSW +L++G+ SW N
Sbjct: 153 VRDGRRVFDEMGDRDVVSWNSLLTGY----------------------SW---------N 181
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
F+ + +LF + G +P+ T S++ A A +G+ + L+ K GFE VC
Sbjct: 182 RFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVC 241
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
NSLI++ K G + AR VFD ME +D VS
Sbjct: 242 NSLISMLSKSGMLRDARVVFDNMENKDSVS------------------------------ 271
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
W+ MIA + +G EAF F M KP + F+ V+ + ASLK L +H
Sbjct: 272 -WNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKT 330
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
LK G+ + + AL+ +KC E D +F + V VVSW +MI GY NG +
Sbjct: 331 LKSGLSTNQNVLTALMVALTKCKEIDDAFSLFS--LMHGVQSVVSWTAMISGYLQNGDTD 388
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
+A LF M + G PN T+S++L
Sbjct: 389 QAVNLFSLMRRE-------------------------------GVKPNHFTYSTILTVQH 417
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
+V E +H ++IK + +GTAL D + K G+I + +VF+ + K+ I+W+
Sbjct: 418 AVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSA 473
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH-SGLVDKGLKYFNSMEPI 581
M+ G A++G +E+ +F ++ + I PNE T S++ AC+ + V++G K F++
Sbjct: 474 MLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQG-KQFHA---- 528
Query: 582 YNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
Y IK + CV V + ++ G + A + E D +W S++SG Y
Sbjct: 529 YAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISG---YAQHG 584
Query: 638 IAERAVK 644
A++A++
Sbjct: 585 QAKKALE 591
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 236/513 (46%), Gaps = 75/513 (14%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F++ P +++ + + + + EAL LF+ L SG+ P+ T S + CA +
Sbjct: 59 FDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNG 118
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G V K G H+SV NSL+ + K G V R VFD M RDVVSW +L +
Sbjct: 119 TVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGY 178
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
SW+ R+N ++ + LF M ++P+ S
Sbjct: 179 ----------------------SWN----RFN-----DQVWELFCLMQVEGYRPDYYTVS 207
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V++ALA+ A+ GM +HA V+K+G E + + N+LI + SK G +D R+VFD++ K
Sbjct: 208 TVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENK 267
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D VSWNSMI G+ +NGQ EA F FN
Sbjct: 268 D---SVSWNSMIAGHVINGQDLEA-------------------------------FETFN 293
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M L+G P +TF+SV+ + AS+ L + LH K +K G + + TAL K
Sbjct: 294 NMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCK 353
Query: 501 DIESSRRVFDRMPD-KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
+I+ + +F M ++ +SWT M+ G ++G +++NLF M + + PN T S +
Sbjct: 354 EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFT-YSTI 412
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
H+ + + ++ N + + T ++D + G +S+A + + D
Sbjct: 413 LTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETK-D 467
Query: 620 SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
AW+++L+G Y E A K +L E
Sbjct: 468 VIAWSAMLAG---YAQAGETEEAAKIFHQLTRE 497
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 168/362 (46%), Gaps = 37/362 (10%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A+++FD+ P R+ + ++ RY++ +EA LF + R P++ S VLS A
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
G VH +K G+ + + N+L+D+Y+K G +DGR VFD + ++D VVSW
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRD---VVSW 171
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
NS++ GY N + ND W +F M + G
Sbjct: 172 NSLLTGYSWN--------------RFNDQVWE-----------------LFCLMQVEGYR 200
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ T S+V+ A A+ ++ G +H ++KLGF + + +L +KSG + +R V
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M +K+ +SW M+ G +G E+ F M+ P T SV+ +C + L
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSC--ASLK 318
Query: 569 DKGL-KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ GL + + + N T ++ L++ + +A + M +W +++
Sbjct: 319 ELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMI 378
Query: 628 SG 629
SG
Sbjct: 379 SG 380
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 44/304 (14%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+F S I++C L K++ LV R LH +K+G+ + + T L++ ++
Sbjct: 304 HATFASVIKSCASL-KEL---GLV---RVLHCKTLKSGLSTNQNVLTALMVALTKCKEID 356
Query: 74 EANEIVKDLNGFDLVVH-NCMINANIQWGNLEEAQRLFDGMP------------------ 114
+A + ++G VV MI+ +Q G+ ++A LF M
Sbjct: 357 DAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQ 416
Query: 115 -----------------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
E++ TAL+ F+K G + +++ FE ++VI+W+A +
Sbjct: 417 HAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLA 476
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC-AEINDFRLGLSVFGLIFKAGFE 216
G+ Q G + EA K+F +L G+KPNE TF SI AC A G K
Sbjct: 477 GYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLN 536
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ V +SL+TL K G ++ A +F R ++RD+VSW ++ + + G +A +F+EM
Sbjct: 537 NALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEM 596
Query: 277 PERN 280
+RN
Sbjct: 597 QKRN 600
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE---- 142
L V + ++ + GN+E A +F ER+ VSW ++ISG+ +HG+ ++++ FE
Sbjct: 539 LCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQK 598
Query: 143 RNPFQNVISWTAAICGFVQNGF 164
RN + I++ I G
Sbjct: 599 RNLEVDAITFIGVISACAHAGL 620
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 11 INP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
I P E +F S I C + QG+ H + IK ++ +++ L+ +Y
Sbjct: 499 IKPNEFTFCSIINACTAPTASVE------QGKQFHAYAIKLRLNNALCVSSSLVTLY-AK 551
Query: 70 RKSLE-ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN----EVSWTAL 124
R ++E A+EI K DLV N MI+ Q G ++A +F+ M +RN +++ +
Sbjct: 552 RGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGV 611
Query: 125 ISGFMKHGRVEESMWYF 141
IS G V + YF
Sbjct: 612 ISACAHAGLVGKGQNYF 628
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 251/441 (56%), Gaps = 5/441 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF-RQMTRYSFKPNTSCFSIVLS 324
L AR +FDEMP+R+ VSW+ ++ Y + G +EA+R+F R + +PN V+S
Sbjct: 192 LAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVS 251
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A+ + L G V+ +V G+ + V + NALID++ K G R VFDS+ KDV
Sbjct: 252 AMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDV-- 309
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
SW +M+ Y G +E A LFD+MP+RN VSWS +I+ Y + Q + +F M+
Sbjct: 310 -YSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIE 368
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP-YDVFLGTALTDTYAKSGDIE 503
G P + SVL A A + L+ G+ ++ + G V LG A D YAK GD +
Sbjct: 369 EGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFD 428
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
++ ++F M ++N +SW M+ A G ++E + LFE+++ T I P+E+T L +L ACS
Sbjct: 429 AASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACS 488
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
HSGLV +G +YF M+ IY I+P HY C++D+L + G L EA + MP E D W
Sbjct: 489 HSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGW 548
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL+ C+ Y N +I E A L +L YVL+S IYAS +W +R LM E+
Sbjct: 549 GALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRER 608
Query: 684 GLRKSGGCSWVEVRNQVHFFF 704
G++K+ GCS +EV + H F
Sbjct: 609 GVKKNPGCSSIEVDGKFHEFL 629
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 174/316 (55%), Gaps = 16/316 (5%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
++WG++ AQ + G AL+ + H + + F+ P ++V+SWT +
Sbjct: 167 LKWGHV--AQSVLVG---------NALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVD 215
Query: 158 GFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+ + G + EA ++F +++ G++PNEVT ++ A ++ G V+ + G
Sbjct: 216 GYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVG 275
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ V++ N+LI + K G AR VFD M +DV SWT +++ + + GDL A R+FD+M
Sbjct: 276 RSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDM 335
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
P RN VSWS MIA Y+Q+ PEEA RLF+ M +P + VLSA A L L G
Sbjct: 336 PRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGR 395
Query: 337 HVHA-HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
++ +V+ V + NA ID+Y+KCG+ +F + E++ VVSWNSMI +
Sbjct: 396 WIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERN---VVSWNSMIMAH 452
Query: 396 GLNGQMEEAKELFDNM 411
++GQ EE LF+ +
Sbjct: 453 AVHGQSEEVLRLFEQL 468
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 143/302 (47%), Gaps = 9/302 (2%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G + + N +I+ ++G A+ +FD M ++ SWT +++ + K G +E + F+
Sbjct: 275 GRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDD 334
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +N +SW+ I + Q EA++LF ++E GV+P S+ ACA++ LG
Sbjct: 335 MPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLG 394
Query: 204 LSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
++ + V++ N+ I + K G+ D A +F M +R+VVSW ++
Sbjct: 395 RWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAV 454
Query: 263 MGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTS 317
G E R+F+++ +E+++ +++ + SG E R F++M Y +P +
Sbjct: 455 HGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSE 514
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
++ ++ L + L V + +E D AL++ G + G D +
Sbjct: 515 HYACMIDLLGKIGLLEEAFEV---AKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKL 571
Query: 378 VE 379
V+
Sbjct: 572 VQ 573
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/441 (37%), Positives = 256/441 (58%), Gaps = 5/441 (1%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
D+ A ++F +P R W+ +I + + A L++ M + F PN FS VL
Sbjct: 58 ADISHAYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVL 117
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A + G+ HA V+K+G E F+ N LI LY+ + R +FD +DV
Sbjct: 118 RACTDNSPV--GLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDV- 174
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
++W ++I GY +G +E A+ELFD MP+RN+VSWSA+I+GY+ F +FN++
Sbjct: 175 --ITWTALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQ 232
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
L+G PN + L A + + SL+ G+ +H + + G D LGTAL D YAK G IE
Sbjct: 233 LTGLRPNHAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIE 292
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ VF++MPDK+ ++T ++ GLA G + ++I LF M+ + PNE+T + VL ACS
Sbjct: 293 IACSVFEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACS 352
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
GLVD+GL+ FN M +Y I+P +HY C+VD+L R+G L EA+ + MP EPDS
Sbjct: 353 RMGLVDEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVL 412
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL+ C+ + + ++ + V++L + +H +VLLSN+YAS+ +W + VRK M K
Sbjct: 413 GALLNSCRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAK 472
Query: 684 GLRKSGGCSWVEVRNQVHFFF 704
++K GCS +E+ V F
Sbjct: 473 KVKKVPGCSSIEIDGSVSEFI 493
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 189/376 (50%), Gaps = 13/376 (3%)
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P + W I FV+ + AL L+ +L++G PN TFS + +AC + + +GL
Sbjct: 71 PHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTD--NSPVGL 128
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + K G+E + V N LI L V+ AR +FD RDV++WT +++ +++ G
Sbjct: 129 ASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSG 188
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ AR +FD+MPERNEVSWS MI Y G EA LF + +PN + L+
Sbjct: 189 HVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALT 248
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A + L +L G +HA+V + G E D + AL+D+Y+KCG + VF+ + +KD
Sbjct: 249 ACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKD--- 305
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFN 440
++ S+I G +GQ +A +LF M N+V++ ++S D +FN
Sbjct: 306 AFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFN 365
Query: 441 EM-LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M ++ G P + ++ LE+ K L + ++ D ++ AL ++
Sbjct: 366 CMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRL---VREMPMEPDSYVLGALLNSCRVH 422
Query: 500 GDIESSRRVFDRMPDK 515
GD+E + + + ++
Sbjct: 423 GDVELGKETVESLVER 438
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 161/307 (52%), Gaps = 13/307 (4%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
+D V+ N +I+ W ++E A++LFD R+ ++WTALI+G++K G VE + F++
Sbjct: 142 YDFVL-NGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHVEFARELFDQM 200
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +N +SW+A I G+V G EAL+LF L +G++PN AC+ + G
Sbjct: 201 PERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLDHGR 260
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + + G E + +L+ + K G +++A SVF++M +D ++T ++ G
Sbjct: 261 WIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISGLANHG 320
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCF 319
+A ++F M NEV++ +++ ++ G +E R+F M+ Y +P +
Sbjct: 321 QSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIEPGVQHY 380
Query: 320 SIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
++ L R+G+ A V ++ +E D ++ AL++ G+ + G+ +S+
Sbjct: 381 GCMVDLLG-----RAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGKETVESL 435
Query: 378 VEKDVAH 384
VE+ + H
Sbjct: 436 VERGLDH 442
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 129/265 (48%), Gaps = 39/265 (14%)
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
N + A +LF ++P R W+ II ++E + +++ ML +G +PN TFS V
Sbjct: 57 NADISHAYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFV 116
Query: 458 L--CASASVASLEKGKDLHGKIIKLGF-PYDVFLG------------------------- 489
L C S L H ++IKLG+ YD L
Sbjct: 117 LRACTDNSPVGLAS----HAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCR 172
Query: 490 -----TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
TAL + Y KSG +E +R +FD+MP++NE+SW+ M+ G G +E++ LF +++
Sbjct: 173 DVITWTALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQ 232
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
T + PN I+ L ACS+ G +D G ++ ++ + + T +VDM ++ G +
Sbjct: 233 LTGLRPNHAGIVGALTACSYLGSLDHG-RWIHAYVDRNGTELDRVLGTALVDMYAKCGCI 291
Query: 605 SEAEDFINSMPFEPDSNAWASLLSG 629
A MP + D+ A+ SL+SG
Sbjct: 292 EIACSVFEKMP-DKDAFAFTSLISG 315
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS--GDIESSRRVFDRMPDKNEISWTVM 523
++ + K +H +I D F + +A S DI + ++F +P + W +
Sbjct: 22 TMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPHRTTFIWNTI 81
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC---------SHSGLVDKGLKY 574
+R E +++L++ M +T PN T VL AC SH+ ++ G +
Sbjct: 82 IRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPVGLASHAQVIKLGWES 141
Query: 575 FN-----------------SMEPIYNIKP--NGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
++ + ++++ + +T +++ +SG + A + + MP
Sbjct: 142 YDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHVEFARELFDQMP 201
Query: 616 FEPDSNAWASLLSG 629
E + +W+++++G
Sbjct: 202 -ERNEVSWSAMITG 214
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 196/635 (30%), Positives = 299/635 (47%), Gaps = 105/635 (16%)
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +NV++WT+ + G+ +NG AL +F ++ESGV PN+ ++ ACA++ R G
Sbjct: 2 PRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGE 61
Query: 205 SVFGLIFKAGF--EKHVSVC-----------------------------NSLITLSLKMG 233
V L +AGF + + C SLI+ + G
Sbjct: 62 QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNG 121
Query: 234 EVDLARSVFDRMEKR-------------------------------------DVVSWTVI 256
E +LA +M K+ V S T +
Sbjct: 122 EFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTAL 181
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+D + G+ A+ +FD + +N VSW M+ Y + G EEA ++F M PN
Sbjct: 182 IDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNE 241
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
SIVL A S+ G +H +K + D+ +SNAL+ +
Sbjct: 242 FALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSM---------------- 282
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
YG G +EE + + + + + VSW+ IS ++ +
Sbjct: 283 ------------------YGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 324
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
A+ +M G PN FSSVL + A VASL++G H +KLG ++ G AL + Y
Sbjct: 325 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 384
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
+K G + S+R FD M + SW ++ G A+ G A +++ +F +M I P++ T L
Sbjct: 385 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 444
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
VL C+HSG+V++G +F M Y+ P HY C++DML R+GR EA IN MPF
Sbjct: 445 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 504
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
EPD+ W +LL+ CK ++N I + A L +L++ A YVL+SNIYA G W DA V
Sbjct: 505 EPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKV 564
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R+ M E G++K GCSW+E+ N+VH F + +P
Sbjct: 565 RRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHP 599
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 189/396 (47%), Gaps = 50/396 (12%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MP +N V+W+ +++ Y ++G PE A +F M PN + L A A L ALR+G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
VH+ ++ G D +I + LI++YS+CG + VFD + D VV + S+I +
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM---DSPDVVGYTSLISAF 117
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
NG+ E A E A+I +ML G PN+ T +
Sbjct: 118 CRNGEFELAAE--------------ALI-----------------QMLKQGLKPNEHTMT 146
Query: 456 SVLCASASVASLEKGKDLHGKII-KLGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
++L A V G+ +HG +I K+G V+ TAL D Y+++G+ + ++ VFD +
Sbjct: 147 TILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLH 202
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
KN +SW M++ G +E++ +F +M + PNE + VL AC GL +
Sbjct: 203 CKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLG----R 258
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ +++ + R ++ M R+G + E E +N + PD +W + +S +
Sbjct: 259 QLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE-NPDLVSWTTAISA--NF 315
Query: 634 KNEQIAERAVKNLWKLAEE--HPAGYVLLSNIYASA 667
+N E+A+ L ++ E P GY S + + A
Sbjct: 316 QN-GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCA 350
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 184/415 (44%), Gaps = 70/415 (16%)
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
G+ ++ S TALI + ++G + + F+ +NV+SW + + ++++G EAL++
Sbjct: 169 GLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQV 228
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
F ++ GV PNE S + AC I LG + K + V N+L+++ +
Sbjct: 229 FGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGR 285
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
G V+ ++ +++E D+VS W+ I+
Sbjct: 286 TGLVEELEAMLNKIENPDLVS-------------------------------WTTAISAN 314
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q+G+ E+A L QM F PN FS VLS+ A + +L GM H LK+G + ++
Sbjct: 315 FQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEI 374
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
NALI++YSKCG+ RL FD + D V SWNS+I G+ +G +A E
Sbjct: 375 CTGNALINMYSKCGQMGSARLAFDVMHTHD---VTSWNSLIHGHAQHGDANKALE----- 426
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
VF++M +G P+ STF VL +E+G+
Sbjct: 427 --------------------------VFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE 460
Query: 472 DLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
+I + F + D ++G + + R+ + MP + + + W ++
Sbjct: 461 LFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLL 515
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 198/464 (42%), Gaps = 64/464 (13%)
Query: 38 IQGRALHGHLIK-TGIHKER-YLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
+ G+ +HG+LIK G+ + Y +T L+ Y + + A + L+ ++V M+
Sbjct: 155 VLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQ 214
Query: 96 ANIQWGNLEEAQRLFDGM----PERNEVSWT----------------------------- 122
I+ G LEEA ++F M + NE + +
Sbjct: 215 LYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIR 274
Query: 123 ---ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
AL+S + + G VEE + +++SWT AI QNGF +A+ L ++ G
Sbjct: 275 VSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEG 334
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
PN FSS+ +CA++ G+ L K G + + N+LI + K G++ AR
Sbjct: 335 FTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSAR 394
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSG 295
FD M DV SW ++ + GD +A +F +M + ++ ++ ++ N SG
Sbjct: 395 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 454
Query: 296 YPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
EE FR M +YSF P S ++ ++ L + + + + E D I
Sbjct: 455 MVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRM---INDMPFEPDALIW 511
Query: 355 NALIDLYSKCGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
L+ + C ++ G+L D ++E S+ M Y ++G+ E+A+++ M
Sbjct: 512 KTLL---ASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRM 568
Query: 412 -----PKRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEML 443
K SW I S + H D ++ + E++
Sbjct: 569 DETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELV 612
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 254/440 (57%), Gaps = 5/440 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLS 324
L +A +FDE P R+ +S ++ + S PE A + R M + + P+ S V S
Sbjct: 54 LPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVAS 113
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L++ R G +HAH + D + ++L+D+Y KCG DGR VFDS+ K+
Sbjct: 114 VFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNS-- 171
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
V W +++ GY NG+ EEA +LF +MP RN +W+A+ISG + + +F EM
Sbjct: 172 -VVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRR 230
Query: 445 SG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G I + S V+ SA +A+ G+ LHG ++LGF ++ +G AL D Y+K DI
Sbjct: 231 DGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDIL 290
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
S+R VF+ + ++ ISWT MV G A+ G A+E++ L++ M PNE+T + +++ACS
Sbjct: 291 SAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACS 350
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV KG + F SM+ Y I P +HYTC +D+LSRSG L EAE+ + +MP+EPD W
Sbjct: 351 HAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATW 410
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LLS C YK+ ++ R L +L + + Y+LLSN+YA G+W VRK M
Sbjct: 411 GALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGL 470
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
+RK G SW+E + F
Sbjct: 471 EIRKEPGYSWIEAGREFRLF 490
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 193/426 (45%), Gaps = 38/426 (8%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GV 180
AL+S + K + +++ F+ P +++ +++ + + AL + +L + +
Sbjct: 42 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADAL 101
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ SS+ A + RLG + + + V +SL+ + K G D R
Sbjct: 102 HPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRK 161
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VFD M ++ V WT ++ + G EA ++F MP RN +W+ +I+ +G A
Sbjct: 162 VFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGA 221
Query: 301 FRLFRQMTRYSFKPNTS-CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
LF +M R + + + SIV+ A L A G +H +++G ++ + NALID
Sbjct: 222 VELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALID 281
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+YSKC + R VF+ I +D V+SW +M+ G +G+ EEA
Sbjct: 282 MYSKCSDILSAREVFEGITFRD---VISWTTMVVGEAQHGRAEEA--------------- 323
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII- 478
A+++ M+L+G PN+ TF ++ A + ++KG+ L +
Sbjct: 324 ----------------LALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKN 367
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESI 537
+ G + T D ++SG + + + MP + +E +W ++ + A+ I
Sbjct: 368 EYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCI 427
Query: 538 NLFEEM 543
+ +++
Sbjct: 428 RISDKL 433
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 194/393 (49%), Gaps = 35/393 (8%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ L A+ +V NG D VV + +++ + G+ ++ +++FD M +N V WTAL+SG+
Sbjct: 125 RQLHAHFVVSPYNGDD-VVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYAS 183
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV-TFSS 189
+GR EE++ F P +N+ +WTA I G V G S A++LF+++ GV+ ++ S
Sbjct: 184 NGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSI 243
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ A++ F LG + G + GF ++ V N+LI + K ++ AR VF+ + RD
Sbjct: 244 VIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRD 303
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFR 305
V+SWT ++ + G EA ++D M + NEV++ +I + +G ++ +LF
Sbjct: 304 VISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFE 363
Query: 306 QM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYS 362
M Y P ++ L L+ RSG + A L + E D AL+ S
Sbjct: 364 SMKNEYGITPRLQHYTCYLDLLS-----RSGHLLEAEELMTTMPYEPDEATWGALL---S 415
Query: 363 KCGETKDGRL---VFDSIVEKDVAHVVSWNSMIGGYGLNGQ---MEEAKELFDNMPKRND 416
C + KD + + D ++E ++ + Y +NG+ + + ++ + R +
Sbjct: 416 ACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKE 475
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+S I +G ++F L A GE+P
Sbjct: 476 PGYSWIEAG----REFRLFHA--------GEVP 496
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ GR LHG ++ G + L+ MY L A E+ + + D++ M+
Sbjct: 255 VLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGE 314
Query: 98 IQWGNLEEAQRLFDGM----PERNEVSWTALISGFMKHGRVEESMWYFE--RNPF---QN 148
Q G EEA L+D M + NEV++ LI G V++ FE +N +
Sbjct: 315 AQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPR 374
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ +T + ++G EA +L + +P+E T+ ++ AC + D + + +
Sbjct: 375 LQHYTCYLDLLSRSGHLLEAEELMTTM---PYEPDEATWGALLSACTKYKDAEMCIRI 429
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 10/219 (4%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ +H +I+K G + AL YAKS + + +FD P ++ ++ ++ ++ S
Sbjct: 23 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHS 82
Query: 531 GYAKESINLFEEM-EKTSITPNELTILSV--LFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ ++ + M ++ P+ I SV +FA S + + L + P YN
Sbjct: 83 ASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSP-YNGDDV 141
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
+ + +VDM + G + +SM + +S W +L+SG Y + +E A++
Sbjct: 142 VK--SSLVDMYCKCGSPDDGRKVFDSMSAK-NSVVWTALVSG---YASNGRSEEALQLFR 195
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
+ + + L + + G + A+ + M G+R
Sbjct: 196 SMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVR 234
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 313/597 (52%), Gaps = 71/597 (11%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+L Q L +G +S T LI + K G + F+R P + V+SW+A I G+
Sbjct: 16 GHLIHNQILTNGFASNIHLS-TKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYS 74
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
QNG +AL +FL +L +G K N+ T+ S+ +AC + + G+ + G + K+ F ++
Sbjct: 75 QNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLI 134
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V ++L+ L K G+++ A +F ME+RDVVSW I
Sbjct: 135 VQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAI------------------------ 170
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
I Y G+ ++FR+FR M + P+ F VL A + +H
Sbjct: 171 -------IGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQ 223
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
++++G + +S +LID Y+KC ++ S+ KD ++S +++ GY +
Sbjct: 224 LIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKD---MISCTALMTGYARDSN 280
Query: 401 M-EEAKELFDNMPKRNDVSWSAIISGYLEHKQFD--LVFAVFNEMLLSGEIPNKSTFSSV 457
+A +LF + + H + D ++ ++FN
Sbjct: 281 YSSKALDLFKEIQQM--------------HMKIDDVILCSMFN----------------- 309
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
+C A+++SL G+ +H +K YDV +G AL D YAKSG+I+ + R F+ M +KN
Sbjct: 310 IC--ANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNV 367
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
ISWT ++ G G+ E+I LF++ME + PN++T LS+LFAC+H GL +G + FN+
Sbjct: 368 ISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNN 427
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M YNI P H++C+VD+ +R G L EA + IN M +P+++ W ++L C Y N
Sbjct: 428 MISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMP 487
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
+AE A +L+K+ E+ YV+L++IYA+AG W +A +RKLM E+ L+K+ G S++
Sbjct: 488 LAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSFI 544
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 203/440 (46%), Gaps = 74/440 (16%)
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C E + G + I GF ++ + LI K+G+ AR VFDRM +R VVSW
Sbjct: 7 CIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSW 66
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
S I+ Y+Q+G ++A +F M R FK
Sbjct: 67 -------------------------------SAQISGYSQNGCYQDALLVFLDMLRAGFK 95
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
N + VL A L+ L+ GM + + K ++ + +AL+DL+SKCG+ +D +
Sbjct: 96 ANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYL 155
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F + E+D VVSWN++IG Y + G ++
Sbjct: 156 FGMMEERD---VVSWNAIIGAYAVQGFSGDS----------------------------- 183
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F +F M+ G P+ TF SVL AS + + + +H II+LG+ + L +L
Sbjct: 184 --FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLI 241
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA-ESGYAKESINLFEEMEKTSITPNE 552
D YAK + S+ ++ MP K+ IS T ++ G A +S Y+ ++++LF+E+++ + ++
Sbjct: 242 DAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDD 301
Query: 553 LTILSVLFACSHSGLVDKGLKYFN---SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
+ + S+ C++ + G + +P Y++ ++DM ++SG + +A
Sbjct: 302 VILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMG----NALIDMYAKSGEIKDANR 357
Query: 610 FINSMPFEPDSNAWASLLSG 629
N M E + +W SL++G
Sbjct: 358 AFNEME-EKNVISWTSLITG 376
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 199/456 (43%), Gaps = 79/456 (17%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+L+V + +++ + + G +E+A LF M ER+ VSW A+I
Sbjct: 132 NLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIG------------------- 172
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ GFS ++ ++F +++ G+ P+ TF S+ KA +D
Sbjct: 173 ------------AYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQ 220
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ LI + G+ H+S+ SLI K + A ++ M +D++S T ++
Sbjct: 221 IHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMT------- 273
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
G AR S Y +A LF+++ + K + + +
Sbjct: 274 -GYAR----------------------DSNYSSKALDLFKEIQQMHMKIDDVILCSMFNI 310
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A++ +L G +HA LK DV + NALID+Y+K GE KD F+ + EK+ V
Sbjct: 311 CANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKN---V 367
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+SW S+I GYG +G EA LF M K ND+++ +++ + FN
Sbjct: 368 ISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNN 427
Query: 442 MLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKS 499
M+ I P FS ++ A LE+ +L K+ IK P G L Y
Sbjct: 428 MISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIK---PNASLWGAILGACYIY- 483
Query: 500 GDI----ESSRRVFDRMPDKNEISWTVMVRGLAESG 531
G++ E++ +F +M +N +++ V+ A +G
Sbjct: 484 GNMPLAEEAAIHLF-KMDPENSVNYVVLADIYAAAG 518
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 46/245 (18%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
+D+ + N +I+ + G +++A R F+ M E+N +SWT+LI+G+ HG
Sbjct: 334 YDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGH----------- 382
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
EA+ LF K+ G+KPN++TF S+ AC G
Sbjct: 383 --------------------GHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGW 422
Query: 205 SVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIE 262
F +I K + ++ L + G ++ A ++ ++M K + W IL
Sbjct: 423 ECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYI 482
Query: 263 MGDLGEAR----RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR--------Y 310
G++ A +F PE N V++ V+ Y +G + A+++ + M Y
Sbjct: 483 YGNMPLAEEAAIHLFKMDPE-NSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGY 541
Query: 311 SFKPN 315
SF P+
Sbjct: 542 SFIPS 546
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 288/546 (52%), Gaps = 35/546 (6%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+A+ + ++L G P+ TF + KA A + +V + K G ++ V SL+
Sbjct: 26 DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
T G+ AR++ E+ + P V W+
Sbjct: 86 TAYAAGGDGAAARALLSERER---------------------------DTP----VVWNA 114
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA-LRSGMHVHAHVLKI 345
+I+ +N+ EA F M R P + VLSA + GM VH V+
Sbjct: 115 LISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGS 174
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G+ D+ + NAL+D+Y++C + + +FD + V VVSW S++ G G+++EA+
Sbjct: 175 GVLPDLRVENALVDMYAECADMESAWKLFDGM---QVRSVVSWTSLLSGLTRLGRVDEAR 231
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
+LF MP+R+ VSW+A+I GY++ +F +F EM S ++ T SV+ A A +
Sbjct: 232 DLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLG 291
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+LE G+ + + + G D F+G AL D Y+K G IE + VF M +++ +WT ++
Sbjct: 292 ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIIL 351
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
GLA +GY +E+I +F M S TP+E+T + VL AC+H+GLVDKG ++F SM YNI
Sbjct: 352 GLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIA 411
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
PN HY C++D+ R+G+++EA D I+ MP P+S W +LL+ C+ + N +I E +
Sbjct: 412 PNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTER 471
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQ 705
L ++ E+ Y LLSNIYA RW D +R + EKG++K GCS +E+ +H F
Sbjct: 472 LLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVA 531
Query: 706 KTDHNP 711
+P
Sbjct: 532 GDQSHP 537
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 176/378 (46%), Gaps = 37/378 (9%)
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE-INDFRLGLSVFG 208
+ W A I G + EA F+ + +G P VT+ S+ AC + D LG+ V G
Sbjct: 110 VVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHG 169
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ +G + V N+L+ + + +++ A +FD M+ R VVSWT +L +G + E
Sbjct: 170 RVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDE 229
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +F MPER+ VSW+ MI Y Q+ EA +FR+M + + V++A A
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L AL G V ++ + GI+ D F+ NALID+YSKCG + VF + +D +W
Sbjct: 290 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRD---KFTW 346
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++I G +NG EEA E+ F+ M+ E
Sbjct: 347 TAIILGLAVNGYGEEAIEM-------------------------------FHRMIGVSET 375
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRR 507
P++ TF VL A ++KG++ + + +V + D + ++G I +
Sbjct: 376 PDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALD 435
Query: 508 VFDRMP-DKNEISWTVMV 524
D+MP N W ++
Sbjct: 436 AIDQMPMTPNSTIWGTLL 453
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 168/376 (44%), Gaps = 71/376 (18%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL V N +++ + ++E A +LFDGM R+ VSWT+L+SG + GRV+E+ F R P
Sbjct: 179 DLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMP 238
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++ +SWTA I G+VQ EAL++F ++ S V +E T S+ ACA++ +G
Sbjct: 239 ERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEW 298
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V + + G + V N+LI + K G ++ A VF M RD +WT I+
Sbjct: 299 VRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAII-------- 350
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
LG A +GY EEA +F +M S P+ F VL+A
Sbjct: 351 LGLA-----------------------VNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTA 387
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK-DVA- 383
HA G GR F S+ E ++A
Sbjct: 388 C-----------THA------------------------GLVDKGREFFLSMRETYNIAP 412
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+VV + +I +G G++ EA + D MP N W +++ H + + + E
Sbjct: 413 NVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSE-IGELVTER 471
Query: 443 LLSGEIPNKSTFSSVL 458
LL + P ST ++L
Sbjct: 472 LLQMD-PENSTVYTLL 486
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 171/396 (43%), Gaps = 84/396 (21%)
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
ARR+ + +P R V+ AR E+A + +M P+ F +L A+A
Sbjct: 7 HARRLLEGIPRRCLVA-----AR-------EDAVAGYARMLARGAMPDAYTFPPLLKAVA 54
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+ VHAHV+K G+ ++ ++ +L+ Y+ G+ R + E++ V
Sbjct: 55 RGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLS---ERERDTPVV 111
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
WN A+ISG+ ++F F +M +G
Sbjct: 112 WN-------------------------------ALISGHNRCRRFGEACCSFVDMARAGA 140
Query: 448 IPNKSTFSSVLCASA-SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P T+ SVL A + G +HG+++ G D+ + AL D YA+ D+ES+
Sbjct: 141 APTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAW 200
Query: 507 RVFD-------------------------------RMPDKNEISWTVMVRGLAESGYAKE 535
++FD RMP+++ +SWT M+ G ++ +E
Sbjct: 201 KLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFRE 260
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG--LKYFNSMEPIYNIKPNGRHYTC 593
++ +F EM+ ++++ +E T++SV+ AC+ G ++ G ++ + S + IK +
Sbjct: 261 ALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQ---GIKMDAFVGNA 317
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
++DM S+ G + A D M D W +++ G
Sbjct: 318 LIDMYSKCGSIERALDVFKDM-HHRDKFTWTAIILG 352
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 272/466 (58%), Gaps = 34/466 (7%)
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
K D+++ ++++++ + G + AR++FDEMP R+ VSW+ MI Q+G EA L Q
Sbjct: 96 KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQ 155
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R + S VL A A+ AL +HA +K ++ +VF++ AL+D+Y+KCG
Sbjct: 156 MQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGL 215
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
KD VF+S+ ++ VV+W+SM GY N E+A LF +W
Sbjct: 216 MKDAVCVFESMPDRS---VVTWSSMAAGYVQNEMYEQALALFRK-------AWET----G 261
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
L+H QF SSV+CA A +A++ +GK ++ + K GF ++
Sbjct: 262 LKHDQF--------------------LMSSVICACAGLAAMIEGKQVNALLSKSGFCSNI 301
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+ ++L D YAK G IE S +VF + +N + W M+ GL+ + E + LFE+M++
Sbjct: 302 FVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQM 361
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
++PN++T +SVL AC H GLV KG KYF+ M +++ PN HY+C+VD LSR+G++ E
Sbjct: 362 GLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFE 421
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A D I+ +PF ++ W SLL+ C+T+ N ++AE A K L+ + + Y+LLSN+YA+
Sbjct: 422 AYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAA 481
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G+W + +RKL+ E ++K G SW+E++++VH F ++PK
Sbjct: 482 NGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPK 527
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 36/308 (11%)
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+L A K L G HA +L +G++ D+ SN LI++YSKCG R VFD + +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+VSWN+MIG NG+ EA +L M +
Sbjct: 130 ---LVSWNTMIGSLTQNGEENEALDLLLQMQRE--------------------------- 159
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
G ++ T SSVLCA A+ +L + + LH IK +VF+ TAL D YAK G
Sbjct: 160 ----GTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGL 215
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + VF+ MPD++ ++W+ M G ++ ++++ LF + +T + ++ + SV+ A
Sbjct: 216 MKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICA 275
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+ + +G K N++ N + ++DM ++ G + E+ + + +
Sbjct: 276 CAGLAAMIEG-KQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE-KRNVV 333
Query: 622 AWASLLSG 629
W +++SG
Sbjct: 334 LWNAMISG 341
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 182/416 (43%), Gaps = 71/416 (17%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G AQ L G+ + + ++ LI+ + K G V+ + F+ P ++++SW I
Sbjct: 83 GKACHAQILLMGL-KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLT 141
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
QNG EAL L L++ G +E T SS+ ACA + KA + +V
Sbjct: 142 QNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVF 201
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V +L+ + K G + A VF+ M R V
Sbjct: 202 VATALLDVYAKCGLMKDAVCVFESMPDRSV------------------------------ 231
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
V+WS M A Y Q+ E+A LFR+ K + S V+ A A L A+ G V+A
Sbjct: 232 -VTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNA 290
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ K G ++F++++LID+Y+KCG ++ VF + +++ VV WN+MI G + +
Sbjct: 291 LLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRN---VVLWNAMISGLSRHAR 347
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
E LF+ M +M LS PN TF SVL A
Sbjct: 348 SLEVMILFEKM----------------------------QQMGLS---PNDVTFVSVLSA 376
Query: 461 SASVASLEKGK---DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ ++KG+ DL K L P +VF + + DT +++G I + + ++P
Sbjct: 377 CGHMGLVKKGQKYFDLMTKEHHLA-P-NVFHYSCMVDTLSRAGQIFEAYDLISKLP 430
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 185/432 (42%), Gaps = 81/432 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE-ANEIVKDLNGF 85
+LK + L++QG+A H ++ G+ K LT+ +LI S++ A ++ ++
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGL-KTDLLTSNILINMYSKCGSVDFARQVFDEMPSR 128
Query: 86 DLVVHNCMINANIQWGNLEEAQRLF-----DGMP-------------------------- 114
LV N MI + Q G EA L +G P
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188
Query: 115 --------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
+ N TAL+ + K G +++++ FE P ++V++W++ G+VQN
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+AL LF K E+G+K ++ SS+ ACA + G V L+ K+GF ++ V +SLI
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLI 308
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ K G ++ + VF +EKR+VV W ++ R+ S V
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGL-----------------SRHARSLEV 351
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-I 345
MI LF +M + PN F VLSA + ++ G + K
Sbjct: 352 MI--------------LFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEH 397
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-AHVVSWNSMIGGYGLNGQME-- 402
+ +VF + ++D S+ G+ + +D I + A W S++ +G +E
Sbjct: 398 HLAPNVFHYSCMVDTLSRAGQIFEA---YDLISKLPFNASASMWGSLLASCRTHGNLELA 454
Query: 403 --EAKELFDNMP 412
AK+LFD P
Sbjct: 455 EVAAKKLFDIEP 466
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 124/241 (51%), Gaps = 20/241 (8%)
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
LCA + L +GK H +I+ +G D+ L + Y+K G ++ +R+VFD MP ++
Sbjct: 73 LCAKRKL--LLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC-SHSGLVDKGLKYFN 576
+SW M+ L ++G E+++L +M++ +E TI SVL AC + L + L +
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
+++ ++ N T ++D+ ++ G + +A SMP + W+S+ +G Y
Sbjct: 191 AIKAAMDL--NVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSMAAG---YVQN 244
Query: 637 QIAERAV---KNLWKLAEEHPAGYVLLSNIYASAG--RWIDAMNVRKLMTEKGLRKSGGC 691
++ E+A+ + W+ +H +++ S I A AG I+ V L++ KSG C
Sbjct: 245 EMYEQALALFRKAWETGLKHDQ-FLMSSVICACAGLAAMIEGKQVNALLS-----KSGFC 298
Query: 692 S 692
S
Sbjct: 299 S 299
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 272/466 (58%), Gaps = 34/466 (7%)
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
K D+++ ++++++ + G + AR++FDEMP R+ VSW+ MI Q+G EA L Q
Sbjct: 96 KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQ 155
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R + S VL A A+ AL +HA +K ++ +VF++ AL+D+Y+KCG
Sbjct: 156 MQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGL 215
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
KD VF+S+ ++ VV+W+SM GY N E+A LF +W
Sbjct: 216 MKDAVCVFESMPDRS---VVTWSSMAAGYVQNEMYEQALALFRK-------AWET----G 261
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
L+H QF SSV+CA A +A++ +GK ++ + K GF ++
Sbjct: 262 LKHDQF--------------------LMSSVICACAGLAAMIEGKQMNALLSKSGFCSNI 301
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+ ++L D YAK G IE S +VF + +N + W M+ GL+ + E + LFE+M++
Sbjct: 302 FVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQM 361
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
++PN++T +SVL AC H GLV KG KYF+ M +++ PN HY+C+VD LSR+G++ E
Sbjct: 362 GLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFE 421
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A D I+ +PF ++ W SLL+ C+T+ N ++AE A K L+ + + Y+LLSN+YA+
Sbjct: 422 AYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAA 481
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G+W + +RKL+ E ++K G SW+E++++VH F ++PK
Sbjct: 482 NGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPK 527
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 36/308 (11%)
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+L A K L G HA +L +G++ D+ SN LI++YSKCG R VFD + +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+VSWN+MIG NG+ EA +L M +
Sbjct: 130 ---LVSWNTMIGSLTQNGEENEALDLLLQMQRE--------------------------- 159
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
G ++ T SSVLCA A+ +L + + LH IK +VF+ TAL D YAK G
Sbjct: 160 ----GTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGL 215
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + VF+ MPD++ ++W+ M G ++ ++++ LF + +T + ++ + SV+ A
Sbjct: 216 MKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICA 275
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+ + +G K N++ N + ++DM ++ G + E+ + + +
Sbjct: 276 CAGLAAMIEG-KQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE-KRNVV 333
Query: 622 AWASLLSG 629
W +++SG
Sbjct: 334 LWNAMISG 341
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 181/416 (43%), Gaps = 71/416 (17%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G AQ L G+ + + ++ LI+ + K G V+ + F+ P ++++SW I
Sbjct: 83 GKACHAQILLMGL-KTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLT 141
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
QNG EAL L L++ G +E T SS+ ACA + KA + +V
Sbjct: 142 QNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVF 201
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V +L+ + K G + A VF+ M R V
Sbjct: 202 VATALLDVYAKCGLMKDAVCVFESMPDRSV------------------------------ 231
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
V+WS M A Y Q+ E+A LFR+ K + S V+ A A L A+ G ++A
Sbjct: 232 -VTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNA 290
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ K G ++F++++LID+Y+KCG ++ VF + +++ VV WN+MI G + +
Sbjct: 291 LLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRN---VVLWNAMISGLSRHAR 347
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
E LF+ M +M LS PN TF SVL A
Sbjct: 348 SLEVMILFEKM----------------------------QQMGLS---PNDVTFVSVLSA 376
Query: 461 SASVASLEKGK---DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ + KG+ DL K L P +VF + + DT +++G I + + ++P
Sbjct: 377 CGHMGLVRKGQKYFDLMTKEHHLA-P-NVFHYSCMVDTLSRAGQIFEAYDLISKLP 430
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 185/432 (42%), Gaps = 81/432 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE-ANEIVKDLNGF 85
+LK + L++QG+A H ++ G+ K LT+ +LI S++ A ++ ++
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGL-KTDLLTSNILINMYSKCGSVDFARQVFDEMPSR 128
Query: 86 DLVVHNCMINANIQWGNLEEAQRLF-----DGMP-------------------------- 114
LV N MI + Q G EA L +G P
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188
Query: 115 --------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
+ N TAL+ + K G +++++ FE P ++V++W++ G+VQN
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+AL LF K E+G+K ++ SS+ ACA + G + L+ K+GF ++ V +SLI
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLI 308
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ K G ++ + VF +EKR+VV W ++ R+ S V
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGL-----------------SRHARSLEV 351
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-I 345
MI LF +M + PN F VLSA + +R G + K
Sbjct: 352 MI--------------LFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEH 397
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-AHVVSWNSMIGGYGLNGQME-- 402
+ +VF + ++D S+ G+ + +D I + A W S++ +G +E
Sbjct: 398 HLAPNVFHYSCMVDTLSRAGQIFEA---YDLISKLPFNASASMWGSLLASCRTHGNLELA 454
Query: 403 --EAKELFDNMP 412
AK+LFD P
Sbjct: 455 EVAAKKLFDIEP 466
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 124/239 (51%), Gaps = 16/239 (6%)
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
LCA + L +GK H +I+ +G D+ L + Y+K G ++ +R+VFD MP ++
Sbjct: 73 LCAKRKL--LLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC-SHSGLVDKGLKYFN 576
+SW M+ L ++G E+++L +M++ +E TI SVL AC + L + L +
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
+++ ++ N T ++D+ ++ G + +A SMP + W+S+ +G Y
Sbjct: 191 AIKAAMDL--NVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSMAAG---YVQN 244
Query: 637 QIAERAV---KNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
++ E+A+ + W+ +H +++ S I A AG + AM K M L KSG CS
Sbjct: 245 EMYEQALALFRKAWETGLKHDQ-FLMSSVICACAG--LAAMIEGKQMNAL-LSKSGFCS 299
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/632 (29%), Positives = 323/632 (51%), Gaps = 71/632 (11%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + + C + +++ G L A L + E + + TALI+ + + +E + F+
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLES---GVKPNEVTFSSICKACAEINDFR 201
+ +++W A I G+ +NG ALK++ ++ G+KP+ +TFSS AC + D
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G + +G+ V N+LI + +
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINM-------------------------------YS 209
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L AR++FD + R+ ++W+ MI+ Y + G +A LF++M KPN F
Sbjct: 210 KCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIG 269
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+L+A +L+ L G +H V + G E D+ I N L+++Y+KC +
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSS-------------- 315
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+EEA+++F+ M R+ ++W+ +I Y+++ Q +F +
Sbjct: 316 -------------------LEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M L PN+ T S+VL A A + + +GK +H I DV L +L + Y + G
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + VF + DK+ +SW+ ++ A+ G+++ + F E+ + + +++T++S L A
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH G++ +G++ F SM + + P+ RH+ C+VD+LSR+GRL AE+ I+ MPF PD+
Sbjct: 477 CSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAV 536
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKL-AEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
AW SLLSGCK + + + A R L++L +E+ + LLSN+YA AGRW D VRK
Sbjct: 537 AWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTR 593
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ RK+ GCS++E+ + VH F +P+
Sbjct: 594 NRRAARKNPGCSYIEINDTVHEFVAGDKSHPE 625
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 249/535 (46%), Gaps = 85/535 (15%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ K G V +++ F N +SWT + F +NG EAL + +++ G++P+ F
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
C+ D + G + +I + E + + +LIT+ + +++LAR FD M
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
K+ +V+W ++ + GD A +I+ +M ++ PE
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKS----------------PE-------- 157
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
KP+ FS L A + + G + A + G D + NALI++YSKCG
Sbjct: 158 ----GMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGS 213
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ R VFD + +D V++WN+MI GY G +A ELF M ND
Sbjct: 214 LESARKVFDRLKNRD---VIAWNTMISGYAKQGAATQALELFQRMGP-NDPK-------- 261
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
PN TF +L A ++ LE+G+ +H K+ + G+ D+
Sbjct: 262 ----------------------PNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299
Query: 487 FLGTALTDTYAK-SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+G L + Y K S +E +R+VF+RM ++ I+W +++ + G AK+++++F++M+
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV------DMLS 599
++ PNE+T+ +VL AC+ G +G + ++ + +GR VV +M +
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQG-------KAVHALIASGRCKADVVLENSLMNMYN 412
Query: 600 RSGRLSEAEDFINSMPFEPDSN--AWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
R G L +D + D + +W++L++ Y + +++ W+L +E
Sbjct: 413 RCGSL---DDTVGVFAAIRDKSLVSWSTLIAA---YAQHGHSRTGLEHFWELLQE 461
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 128/264 (48%), Gaps = 9/264 (3%)
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
YG G + +A +F + N VSW+ I++ + + + + M+L G P+ + F
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ +S L++G+ LH I++ +D+ LGTAL YA+ D+E +R+ FD M
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTS---ITPNELTILSVLFACSHSGLVDK 570
K ++W ++ G + +G + ++ ++++M S + P+ +T S L+AC+ G + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G + + + +++M S+ G L A + + D AW +++SG
Sbjct: 182 G-REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG- 238
Query: 631 KTYKNEQIAERAVKNLWKLAEEHP 654
Y + A +A++ ++ P
Sbjct: 239 --YAKQGAATQALELFQRMGPNDP 260
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 178/425 (41%), Gaps = 58/425 (13%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL-EANEIV 79
+ T + LL T+ + QGRA+H + + G + + LL MY SL EA ++
Sbjct: 264 VVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVF 323
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISG-------- 127
+ + D++ N +I A +Q+G ++A +F M NE++ + ++S
Sbjct: 324 ERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKR 383
Query: 128 ---------------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
+ + G +++++ F ++++SW+ I +
Sbjct: 384 QGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYA 443
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHV 219
Q+G S L+ F +LL+ G+ ++VT S AC+ + G+ F ++ G
Sbjct: 444 QHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDY 503
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFD---E 275
++ L + G ++ A ++ M D V+WT +L D A R+ D E
Sbjct: 504 RHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
Query: 276 MPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+ +E S +++ Y ++G ++ + + R + + N C I ++
Sbjct: 564 LESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGD 620
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS--MI 392
H ++ I++ +S + D G D R+V ++ E++ ++ ++S +
Sbjct: 621 KSHPEEELIAAEIKR---LSKQMKD----AGYVPDMRMVLHNVKEEEKEQMLCYHSEKLA 673
Query: 393 GGYGL 397
YGL
Sbjct: 674 IAYGL 678
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 309/569 (54%), Gaps = 41/569 (7%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ K G VEE+ F+ ++ +SWT+ I + NGF EAL L+ ++ G++P+ +TF
Sbjct: 2 YGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 61
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+S AC ++ D G+ AR V ME
Sbjct: 62 TSALLACTKLAD---------------------------------GKAIHARIVSSNMES 88
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
D V + +++++ GD+ AR+ F+++ ++ V W+ ++ Y Q+G+ EA L+ +M
Sbjct: 89 -DFVG-SALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYGRM 146
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
+ + L A ASL AL+ G +H V + G + + + AL+ +Y+KCGE
Sbjct: 147 DHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQS-LVVHTALLTMYAKCGEL 205
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
R VF+ + ++V N+++ Y G +E AK F+ +++ VSW+A+I Y
Sbjct: 206 DAARAVFNRLA----SNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYA 261
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDV 486
+H ++ M G +P++ T +S L A A SL+ G+++H +++K F +
Sbjct: 262 QHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSL 321
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ TAL + Y + G +E++R +F+ M ++ +SWT M A+ G+A + ++L+ EM
Sbjct: 322 MVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLH 381
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PNE+T S+L CSH+GL+ +G++ F M+ + + P H+ C+VD+L RSGRL +
Sbjct: 382 GIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRD 441
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE + SMP++PDS AW ++L CKT+ + A+RA + + +L E+ + Y LLS+I+ +
Sbjct: 442 AEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTA 501
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
AG +A+ V+ M E GL+K G S +E
Sbjct: 502 AGLPQEALEVQLSMKEMGLKKPPGQSLIE 530
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 232/481 (48%), Gaps = 60/481 (12%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALI+ + + G V + FE+ ++V+ WT+ + +VQ G EAL L+ ++ GV
Sbjct: 93 SALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVH 152
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ VT+ + ACA + + G ++ + + GF+ V V +L+T+ K GE+D AR+V
Sbjct: 153 ADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLV-VHTALLTMYAKCGELDAARAV 211
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+R+ +V ++ ++ + G L A+ F+ ++ VSW+ MI Y Q G EA
Sbjct: 212 FNRLAS-NVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREAL 270
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDL 360
L++ MT P+ + LSA A +L+ G +H+ VLK + + + AL+++
Sbjct: 271 DLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNM 330
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y +CG + R +F+ + ++D V+SW +M Y G
Sbjct: 331 YGRCGRLETARSMFEDMGQRD---VLSWTAMTSVYAQQGHA------------------- 368
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
D V ++ EM+L G PN+ TF+S+L + L +G + +++
Sbjct: 369 ------------DQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVEC---FLEM 413
Query: 481 GFPYDV------FLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV---RGLAES 530
++V FL + D +SG + + + + MP + ++W ++ + +++
Sbjct: 414 QSEHEVVPIREHFL--CMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDA 471
Query: 531 GYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
AK + +E+ E TS+ ++LS +F + +GL + L+ SM+ + KP G
Sbjct: 472 DTAKRAARRVKELDPENTSL----YSLLSSIF--TAAGLPQEALEVQLSMKEMGLKKPPG 525
Query: 589 R 589
+
Sbjct: 526 Q 526
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 45/371 (12%)
Query: 43 LHGHLIKTGIHKE--RYLTTRLLIMYLGSRKSLEANEIVKDLNGFD-LVVHNCMINANIQ 99
L+G + G+H + Y+T LG+ K +A + GF LVVH ++ +
Sbjct: 142 LYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAK 201
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G L+ A+ +F+ + N AL++ + K G +E + FE + ++++SW A I +
Sbjct: 202 CGELDAARAVFNRLAS-NVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAY 260
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK-AGFEKH 218
Q+G EAL L+ + GV P+EVT +S ACA +LG + + K F+
Sbjct: 261 AQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSS 320
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ V +L+ + + G ++ ARS+F+ M +RDV+SWT + V
Sbjct: 321 LMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSV------------------- 361
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
Y Q G+ ++ L+ +M + +PN F+ +L + L G+
Sbjct: 362 ------------YAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVEC 409
Query: 339 HAHVLKIGIEKDVFISN----ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
L++ E +V ++DL + G +D + +S+ + + V+W +++G
Sbjct: 410 ---FLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDS--VAWLTVLGS 464
Query: 395 YGLNGQMEEAK 405
+ + AK
Sbjct: 465 CKTHSDADTAK 475
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 151/337 (44%), Gaps = 67/337 (19%)
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y KCG ++ R VFD I +D VSW SMI Y NG +EA +L+ M
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRD---AVSWTSMISSYANNGFCDEALDLYQQMDA------ 51
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
G P+ TF+S L A +A GK +H +I+
Sbjct: 52 -------------------------DGIQPDSITFTSALLACTKLA---DGKAIHARIVS 83
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
D F+G+AL + YA+ GD+ S+R+ F+++ +K+ + WT ++ ++G+ +E+++L
Sbjct: 84 SNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDL 142
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY-NIKPNGRH----YTCV 594
+ M+ + + +T ++ L AC+ G + +G + I+ + G +T +
Sbjct: 143 YGRMDHEGVHADGVTYVTALGACASLGALKEG-------KAIHLRVSECGFQSLVVHTAL 195
Query: 595 VDMLSRSGRLSEAEDFINSMPFE-PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+ M ++ G L A N + NA ++ + C + + L K A E
Sbjct: 196 LTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLE-----------LAKSAFEA 244
Query: 654 PAGYVLLS-----NIYASAGRWIDAMNVRKLMTEKGL 685
L+S YA G +A+++ + MT +G+
Sbjct: 245 SGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGV 281
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 134/293 (45%), Gaps = 27/293 (9%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
KD+ S N +I A HG L L +Y +++ + ++ D
Sbjct: 248 KDLVSWNAMIGAYAQHG------------LGREALDLY----QTMTSQGVLPDEVTIASS 291
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ C I+ ++Q G ++ L + + + + TAL++ + + GR+E + FE ++
Sbjct: 292 LSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRD 351
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SWTA + Q G + + L L+L+++ G++PNE+TF+SI C+ G+ F
Sbjct: 352 VLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECF- 410
Query: 209 LIFKAGFE----KHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEM 263
L ++ E + +C ++ L + G + A ++ + M + D V+W +L
Sbjct: 411 LEMQSEHEVVPIREHFLC--MVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTH 468
Query: 264 GDLGEARRI---FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
D A+R E+ N +S++ + + +G P+EA + M K
Sbjct: 469 SDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLK 521
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 312/632 (49%), Gaps = 61/632 (9%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + C A+ G + G+ VS TAL+ ++K + ++ F
Sbjct: 13 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVS-TALLDMYVKCACLPDAAHIFATM 71
Query: 145 PFQNVISWTAAICGFVQNGFSFEALK--LFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
P +++++W A + G+ +G A+ L +++ ++PN T ++ A+
Sbjct: 72 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G SV +A + + S +T + +G T +LD++ +
Sbjct: 132 GTSVHAYCIRACLHPNRNS-KSKLTDGVLLG--------------------TALLDMYAK 170
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFS 320
G L ARR+FD MP RNEV+WS +I + +AF LF+ M F TS S
Sbjct: 171 CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 230
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
L A ASL LR G +HA + K G+ D+ N+L+ +Y+K
Sbjct: 231 -ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAK----------------- 272
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
G +++A LFD M ++ VS+SA++SGY+++ + + F VF
Sbjct: 273 -----------------AGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+M P+ +T S++ A + +A+L+ G+ HG +I G + + AL D YAK G
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 375
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
I+ SR+VF+ MP ++ +SW M+ G G KE+ LF EM P+ +T + +L
Sbjct: 376 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 435
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSHSGLV +G +F+ M Y + P HY C+VD+LSR G L EA +FI SMP D
Sbjct: 436 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 495
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL C+ YKN + ++ + + +L E +VLLSNIY++AGR+ +A VR +
Sbjct: 496 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 555
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G +KS GCSW+E+ +H F +P+
Sbjct: 556 KVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 587
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 181/390 (46%), Gaps = 85/390 (21%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
T + LL + Q + QG ++H + I+ +H R N K
Sbjct: 114 STLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR-------------------NSKSKL 154
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+G +++ +++ + G+L A+R+FD MP RNEV+W+ALI GF+ R+ ++ F
Sbjct: 155 TDG--VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLF 212
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ + G F + P + +S +ACA ++ R
Sbjct: 213 K---------------AMLAQGLCF-------------LSPTSI--ASALRACASLDHLR 242
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + L+ K+G ++ NSL+++ K G +D A ++FD M +D VS++ ++ ++
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
Q+G EEAF +F++M + +P+ +
Sbjct: 303 -------------------------------QNGRAEEAFLVFKKMQACNVEPDAATMVS 331
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
++ A + L AL+ G H V+ G+ + I NALID+Y+KCG R VF+ + +D
Sbjct: 332 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 391
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+VSWN+MI GYG++G +EA LF M
Sbjct: 392 ---IVSWNTMIAGYGIHGLGKEATALFLEM 418
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 149/373 (39%), Gaps = 86/373 (23%)
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R+ PN F L A ++L G +H H + G++ D+F+S AL+D+Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
D +F ++ +D +V+WN+M+ GY +G A +M
Sbjct: 61 LPDAAHIFATMPARD---LVAWNAMLAGYAHHGMYHHAVAHLLSM--------------- 102
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD- 485
+M + PN ST ++L A +L +G +H I+ +
Sbjct: 103 --------------QMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 486 ---------VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
V LGTAL D YAK G + +RRVFD MP +NE++W+ ++ G ++
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 537 INLFEEMEKTSIT-PNELTILSVLFAC--------------------------------- 562
LF+ M + + +I S L AC
Sbjct: 209 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268
Query: 563 --SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FE 617
+ +GL+D+ + F+ M + Y+ +V ++GR EA M E
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKKMQACNVE 323
Query: 618 PDSNAWASLLSGC 630
PD+ SL+ C
Sbjct: 324 PDAATMVSLIPAC 336
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 215/750 (28%), Positives = 349/750 (46%), Gaps = 113/750 (15%)
Query: 43 LHGHLIKTG--IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
LH +IK G ++ ++L+I+Y S A + +D ++ +I + +
Sbjct: 73 LHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRT 132
Query: 101 GNLEEAQRLF-------DGMPERNEV-----------SW--------------------- 121
G EEA LF DG+P N V W
Sbjct: 133 GFCEEA--LFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECV 190
Query: 122 ---TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
T+L+ + K G VE++ F+ +N ++W + + + QNG + EA+++F ++
Sbjct: 191 YVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQ 250
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV+ V S ACA G GL G E
Sbjct: 251 GVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLE---------------------- 288
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
D V + I++ + ++G + EA +F M ++ V+W++++A Y Q G E
Sbjct: 289 ---------LDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVE 339
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+A + M + + S +L+ A + L GM HA+ +K E DV +S+ +I
Sbjct: 340 KALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGII 399
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVA--------------------------------HVV 386
D+Y+KCG R VF + +KD+ +VV
Sbjct: 400 DMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVV 459
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
SWNS+I G+ NGQ+ EA+ +F M N ++W+ ++SG +++ VF EM
Sbjct: 460 SWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREM 519
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
G PN + +S L S+A L+ G+ +HG +++ + + T++ D YAK G +
Sbjct: 520 QDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSL 579
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ ++ VF K + M+ A G A+E++ LF++MEK I P+ +T+ SVL AC
Sbjct: 580 DGAKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSAC 639
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH GL+ +G+K F M +KP+ HY C+V +L+ G+L EA I +MP PD++
Sbjct: 640 SHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHI 699
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
SLL+ C + ++A+ K L KL ++ YV LSN+YA+ G+W N+R LM E
Sbjct: 700 LGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKE 759
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
KGLRK GCSW+EV ++H F +PK
Sbjct: 760 KGLRKIPGCSWIEVGQELHVFIASDRSHPK 789
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 172/420 (40%), Gaps = 104/420 (24%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V +GR HG + G+ + L + ++ Y
Sbjct: 272 VGEGRQGHGLAVVGGLELDNVLGSSIMNFYF----------------------------- 302
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ G +EEA+ +F M ++ V+W +++G+ + G VE
Sbjct: 303 --KVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVE--------------------- 339
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
+AL++ + E G++ + VT S++ A+ D LG+ K FE
Sbjct: 340 ----------KALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFE 389
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI-------------LDVFIEM 263
V V + +I + K G +D AR VF + K+D+V W + L +F +M
Sbjct: 390 GDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQM 449
Query: 264 ----------------------GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYP 297
G + EAR +F EM N ++W+ M++ Q+G+
Sbjct: 450 QLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFG 509
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
A +FR+M +PN+ + LS S+ L+ G +H +V++ + + + I ++
Sbjct: 510 SGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSI 569
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D+Y+KCG + VF K+ + +N+MI Y +GQ EA LF M K V
Sbjct: 570 MDMYAKCGSLDGAKCVFKMCSTKE---LYVYNAMISAYASHGQAREALVLFKQMEKEGIV 626
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 165/350 (47%), Gaps = 20/350 (5%)
Query: 33 SQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNC 92
+++LV+ G H + +K + +++ ++ MY + A + + D+V+ N
Sbjct: 370 TRDLVL-GMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNT 428
Query: 93 MINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFER----N 144
M+ A + G EA +LF M N VSW +LI GF K+G+V E+ F
Sbjct: 429 MLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSG 488
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
N+I+WT + G VQNGF A+ +F ++ + G++PN ++ +S C + + G
Sbjct: 489 VMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGR 548
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
++ G + + + + + S++ + K G +D A+ VF +++ + ++ + G
Sbjct: 549 AIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHG 608
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCF 319
EA +F +M + + ++ + +++ + G +E ++F+ M + KP+ +
Sbjct: 609 QAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHY 668
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
++ LA+ L + +L + D I +L+ + CG+ D
Sbjct: 669 GCLVKLLANDGQLDEALRT---ILTMPSHPDAHILGSLL---TACGQNND 712
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 52/368 (14%)
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG--IEKD 350
+ G EA QM + + + +L +AL + +HA V+K G +
Sbjct: 28 KHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALN 87
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
F+ + L+ LY+KCG + E A LF +
Sbjct: 88 DFVISKLVILYAKCGAS----------------------------------EPATRLFRD 113
Query: 411 MPKRNDVSWSAII-----SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
P N SW+AII +G+ E F + +M G P+ +VL A +
Sbjct: 114 SPSPNVFSWAAIIGLHTRTGFCEEALFGYI-----KMQQDGLPPDNFVLPNVLKACGVLK 168
Query: 466 SLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+ GK +H ++K +G V++ T+L D Y K G +E + +VFD M ++N+++W MV
Sbjct: 169 WVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMV 228
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
A++G +E+I +F EM + + + AC++S V +G + + + + +
Sbjct: 229 VTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEG-RQGHGLAVVGGL 287
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + + +++ + G + EAE +M + D W +++G Y + E+A++
Sbjct: 288 ELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVK-DVVTWNLVVAG---YAQFGMVEKALE 343
Query: 645 NLWKLAEE 652
+ EE
Sbjct: 344 MCCVMREE 351
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 16/187 (8%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L TS L+ GRA+HG++++ + + ++ T ++ MY A + K + +L
Sbjct: 535 LSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKEL 594
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYF-- 141
V+N MI+A G EA LF M + + ++ T+++S G ++E + F
Sbjct: 595 YVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKY 654
Query: 142 -----ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ P + + + +G EAL+ L + P+ S+ AC +
Sbjct: 655 MVSELQMKPSEE--HYGCLVKLLANDGQLDEALRTILTMPS---HPDAHILGSLLTACGQ 709
Query: 197 INDFRLG 203
ND L
Sbjct: 710 NNDIELA 716
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/591 (30%), Positives = 299/591 (50%), Gaps = 69/591 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+LI+ + G + + F + NV W I F S +L+L+ ++L+ G++
Sbjct: 38 TSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQ 97
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
TF + KAC + DF LG + G+E V V NSL+ + + G D +R V
Sbjct: 98 ATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQV 157
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+R MPERN VSWS M+ Y +G EE
Sbjct: 158 FER-------------------------------MPERNVVSWSSMVGAYAHNGRYEEGL 186
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF +M PN +++A+A + V+ G++ D + NA + +Y
Sbjct: 187 LLFWRMLNEGIAPNRGS---IVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMY 243
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
++C G+++ A+ F + ++ V+W++
Sbjct: 244 ARC----------------------------------GRIDVARRFFYGILDKDLVAWTS 269
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I Y++ +F +M L G +P+ T S++ A +++AS + + +HG I +
Sbjct: 270 MIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSF 329
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F + L TA+ D Y K G++E +R+ FDRM +N ISW+ M+ G G+ +E++ LF+
Sbjct: 330 FKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREALCLFD 389
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
+M K SI P+ + + VL ACSH GL+ +G + F +M + + P HY C+VD+L R+
Sbjct: 390 QM-KASIKPDHIAFVMVLSACSHGGLIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRA 448
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
GRLSEA+ FI MP PD+ W +LL C+ + N + AE A ++L+ L E+P Y+LLS
Sbjct: 449 GRLSEAQAFIERMPITPDAGVWGALLGACRIHSNLETAETAARHLFNLDAENPGRYILLS 508
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYAS+G+ +A ++R LM +G+RK+ G + +E++N+V+ F NP+
Sbjct: 509 NIYASSGKRKEADDIRALMKSRGVRKTVGHTIIEIKNKVYTFVAGDTSNPQ 559
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 160/396 (40%), Gaps = 106/396 (26%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F ++ C CL + + RA H H++ G + ++ L+ MY
Sbjct: 102 TFPFLLKACGCL------ADFELGARA-HAHVVVFGYESDVFVANSLMAMY--------- 145
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
++G + ++++F+ MPERN VSW++++ + +GR E
Sbjct: 146 ----------------------GRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYE 183
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
E L LF ++L G+ PN SI A A
Sbjct: 184 -------------------------------EGLLLFWRMLNEGIAPNR---GSIVNAMA 209
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
I+ ++ G + SV N+ + + + G +D+AR F + +D+V+WT
Sbjct: 210 CIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILDKDLVAWT- 268
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
MI Y Q+ P A LF+QM P+
Sbjct: 269 ------------------------------SMIEAYVQADLPINALELFKQMKLLGIVPD 298
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ ++ A+++L + + VH + + + + + A+IDLY KCG + R FD
Sbjct: 299 SVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFD 358
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ ++ ++SW++MI GYG++G EA LFD M
Sbjct: 359 RMSARN---LISWSTMISGYGMHGHGREALCLFDQM 391
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 255/438 (58%), Gaps = 3/438 (0%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A R+ ++ N ++ +I + S PE +F + + R+ P+ ++ A
Sbjct: 67 LHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKA 126
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A L+ GM H +K G E+D ++ N+L+ +Y+ G+ R VF + DV
Sbjct: 127 CAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDV--- 183
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW MI GY G + A+ELFD MP+RN V+WS +ISGY + F+ F +
Sbjct: 184 VSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAE 243
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G + N++ V+ + A + +L G+ H +++ ++ LGTA+ D YA+ G++E +
Sbjct: 244 GVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKA 303
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
VF+++P+K+ + WT ++ GLA GYA++++ F EM K P ++T +VL ACSH+
Sbjct: 304 VMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHA 363
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G+V++GL+ F SM+ + ++P HY C+VD+L R+G+L +AE F+ MP +P++ W +
Sbjct: 364 GMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRA 423
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL C+ +KN ++ ER K L ++ E+ YVLLSNIYA A +W D +R++M +KG+
Sbjct: 424 LLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGV 483
Query: 686 RKSGGCSWVEVRNQVHFF 703
RK G S +E+ +VH F
Sbjct: 484 RKPPGYSLIEIDGKVHEF 501
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 186/384 (48%), Gaps = 38/384 (9%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+NP N+ + A I G + + ++K L G+ P+ +T + KACA++ + +
Sbjct: 78 QNP--NLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPM 135
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G+ G K GFE+ V NSL+ + +G+++ ARSVF RM + DVVSWT ++ +
Sbjct: 136 GMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHR 195
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GD AR +FD MPERN V+WS MI+ Y ++ E+A F + N + V
Sbjct: 196 CGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGV 255
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+S+ A L AL G H +V++ + ++ + A++D+Y++CG + +VF+ + EKD
Sbjct: 256 ISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKD- 314
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
V+ W ++I G ++G E+A F M K+
Sbjct: 315 --VLCWTALIAGLAMHGYAEKALWYFSEMAKK---------------------------- 344
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGD 501
G +P TF++VL A + +E+G ++ + + G + + D ++G
Sbjct: 345 ---GFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGK 401
Query: 502 IESSRRVFDRMPDK-NEISWTVMV 524
+ + + +MP K N W ++
Sbjct: 402 LRKAEKFVLKMPVKPNAPIWRALL 425
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 157/365 (43%), Gaps = 50/365 (13%)
Query: 10 SINPETSFNSYIETC-LCLLKDITSQNLVIQ----------GRALHGHLIKTGIHKERYL 58
S NPE SF+ YI+ LL D + +++ G HG IK G ++ Y+
Sbjct: 95 SENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYV 154
Query: 59 TTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE 118
L+ MY G++ A+ +F M +
Sbjct: 155 QNSLVHMYASV-------------------------------GDINAARSVFQRMCRFDV 183
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
VSWT +I+G+ + G + + F+R P +N+++W+ I G+ +N +A++ F L
Sbjct: 184 VSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAE 243
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV NE + +CA + +G + + ++ + +++ + + G V+ A
Sbjct: 244 GVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKA 303
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQS 294
VF+++ ++DV+ WT ++ G +A F EM ++ +++++ ++ + +
Sbjct: 304 VMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHA 363
Query: 295 GYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G E +F M R + +P + ++ L LR VLK+ ++ + I
Sbjct: 364 GMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKA---EKFVLKMPVKPNAPI 420
Query: 354 SNALI 358
AL+
Sbjct: 421 WRALL 425
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 146/352 (41%), Gaps = 71/352 (20%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HAH+L+ + DVF ++ LI C ++ L +
Sbjct: 36 IHAHMLRTHLFFDVFAASRLIAF---CIDSTTNLLHY----------------------- 69
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
A + + N ++A+I G + + F + + L G +P+ T +
Sbjct: 70 ------AIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFL 123
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI--------------- 502
+ A A + + G HG+ IK GF D ++ +L YA GDI
Sbjct: 124 VKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDV 183
Query: 503 ----------------ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+S+R +FDRMP++N ++W+ M+ G A + ++++ FE ++
Sbjct: 184 VSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAE 243
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
+ NE ++ V+ +C+H G + G K + + N T VVDM +R G + +
Sbjct: 244 GVVANETVMVGVISSCAHLGALAMGEKAHEYVMR-NKLSLNLILGTAVVDMYARCGNVEK 302
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
A +P E D W +L++G + AE+A LW +E G+V
Sbjct: 303 AVMVFEQLP-EKDVLCWTALIAGLAMHG---YAEKA---LWYFSEMAKKGFV 347
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 175/408 (42%), Gaps = 52/408 (12%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL--EANEIVKDLNGFDLVVHNCMINA-- 96
+ +H H+++T + + + +RL+ + S +L A + + +L ++N +I
Sbjct: 34 KIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGCS 93
Query: 97 -----------------------NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
NI L +A + P + A+ GF +
Sbjct: 94 TSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFY 153
Query: 134 VEESMWYF---------ERNPFQ-----NVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
V+ S+ + R+ FQ +V+SWT I G+ + G + A +LF ++ E
Sbjct: 154 VQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPER- 212
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
N VT+S++ A N F + F + G + +V +I+ +G + +
Sbjct: 213 ---NLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGE 269
Query: 240 SVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
+ + + +++ T ++D++ G++ +A +F+++PE++ + W+ +IA G
Sbjct: 270 KAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHG 329
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFIS 354
Y E+A F +M + F P F+ VL+A + + G+ + + + G+E +
Sbjct: 330 YAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHY 389
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
++DL + G+ + + K A + W +++G ++ +E
Sbjct: 390 GCMVDLLGRAGKLRKAEKFVLKMPVKPNAPI--WRALLGACRIHKNVE 435
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 312/632 (49%), Gaps = 61/632 (9%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + C A+ G + G+ VS TAL+ ++K + ++ F
Sbjct: 13 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVS-TALLDMYVKCACLPDAAHIFATM 71
Query: 145 PFQNVISWTAAICGFVQNGFSFEALK--LFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
P +++++W A + G+ +G A+ L +++ ++PN T ++ A+
Sbjct: 72 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G SV +A + + S +T + +G T +LD++ +
Sbjct: 132 GTSVHAYCIRACLHPNRNS-KSKLTDGVLLG--------------------TALLDMYAK 170
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFS 320
G L ARR+FD MP RNEV+WS +I + +AF LF+ M F TS S
Sbjct: 171 CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 230
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
L A ASL LR G +HA + K G+ D+ N+L+ +Y+K
Sbjct: 231 -ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAK----------------- 272
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
G +++A LFD M ++ VS+SA++SGY+++ + + F VF
Sbjct: 273 -----------------AGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+M P+ +T S++ A + +A+L+ G+ HG +I G + + AL D YAK G
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 375
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
I+ SR+VF+ MP ++ +SW M+ G G KE+ LF EM P+ +T + +L
Sbjct: 376 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 435
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSHSGLV +G +F+ M Y + P HY C+VD+LSR G L EA +FI SMP D
Sbjct: 436 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 495
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL C+ YKN + ++ + + +L E +VLLSNIY++AGR+ +A VR +
Sbjct: 496 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 555
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G +KS GCSW+E+ +H F +P+
Sbjct: 556 KVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 587
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 181/390 (46%), Gaps = 85/390 (21%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
T + LL + Q + QG ++H + I+ +H R N K
Sbjct: 114 STLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR-------------------NSKSKL 154
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+G +++ +++ + G+L A+R+FD MP RNEV+W+ALI GF+ R+ ++ F
Sbjct: 155 TDG--VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLF 212
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ + G F + P + +S +ACA ++ R
Sbjct: 213 K---------------AMLAQGLCF-------------LSPTSI--ASALRACASLDHLR 242
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + L+ K+G ++ NSL+++ K G +D A ++FD M +D VS++ ++ ++
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
Q+G EEAF +F++M + +P+ +
Sbjct: 303 -------------------------------QNGRAEEAFLVFKKMQACNVEPDAATMVS 331
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
++ A + L AL+ G H V+ G+ + I NALID+Y+KCG R VF+ + +D
Sbjct: 332 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 391
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+VSWN+MI GYG++G +EA LF M
Sbjct: 392 ---IVSWNTMIAGYGIHGLGKEATALFLEM 418
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 149/373 (39%), Gaps = 86/373 (23%)
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R+ PN F L A ++L G +H H + G++ D+F+S AL+D+Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
D +F ++ +D +V+WN+M+ GY +G A +M
Sbjct: 61 LPDAAHIFATMPARD---LVAWNAMLAGYAHHGMYHHAVAHLLSM--------------- 102
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD- 485
+M + PN ST ++L A +L +G +H I+ +
Sbjct: 103 --------------QMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 486 ---------VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
V LGTAL D YAK G + +RRVFD MP +NE++W+ ++ G ++
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 537 INLFEEMEKTSIT-PNELTILSVLFAC--------------------------------- 562
LF+ M + + +I S L AC
Sbjct: 209 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268
Query: 563 --SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FE 617
+ +GL+D+ + F+ M + Y+ +V ++GR EA M E
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKKMQACNVE 323
Query: 618 PDSNAWASLLSGC 630
PD+ SL+ C
Sbjct: 324 PDAATMVSLIPAC 336
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 254/440 (57%), Gaps = 5/440 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLS 324
L +A +FDE P R+ +S ++ + S PE A + R M + + P+ S V S
Sbjct: 136 LPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHPDHFVISSVAS 195
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L++ R G +HAH + D + ++L+D+Y KCG DGR VFDS+ K+
Sbjct: 196 VFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNS-- 253
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
V W +++ GY NG+ EEA +LF +MP RN +W+A+ISG + + +F EM
Sbjct: 254 -VVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRR 312
Query: 445 SG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G I + S V+ SA +A+ G+ LHG ++LGF ++ +G AL D Y+K DI
Sbjct: 313 DGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDIL 372
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
S+R VF+ + ++ ISWT MV G A+ G A+E++ L++ M PNE+T + +++ACS
Sbjct: 373 SAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACS 432
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV KG + F SM+ Y I P +HYTC +D+LSRSG L EAE+ + +MP+EPD W
Sbjct: 433 HAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATW 492
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LLS C YK+ ++ R L +L + + Y+LLSN+YA G+W VRK M
Sbjct: 493 GALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGL 552
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
+RK G SW+E + F
Sbjct: 553 EIRKEPGYSWIEAGREFRLF 572
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 193/426 (45%), Gaps = 38/426 (8%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GV 180
AL+S + K + +++ F+ P +++ +++ + + AL + +L + +
Sbjct: 124 AALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADAL 183
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ SS+ A + RLG + + + V +SL+ + K G D R
Sbjct: 184 HPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRK 243
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VFD M ++ V WT ++ + G EA ++F MP RN +W+ +I+ +G A
Sbjct: 244 VFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGA 303
Query: 301 FRLFRQMTRYSFKPNTS-CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
LF +M R + + + SIV+ A L A G +H +++G ++ + NALID
Sbjct: 304 VELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALID 363
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+YSKC + R VF+ I +D V+SW +M+ G +G+ EEA
Sbjct: 364 MYSKCSDILSAREVFEGITFRD---VISWTTMVVGEAQHGRAEEA--------------- 405
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII- 478
A+++ M+L+G PN+ TF ++ A + ++KG+ L +
Sbjct: 406 ----------------LALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKN 449
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESI 537
+ G + T D ++SG + + + MP + +E +W ++ + A+ I
Sbjct: 450 EYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCI 509
Query: 538 NLFEEM 543
+ +++
Sbjct: 510 RISDKL 515
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 194/393 (49%), Gaps = 35/393 (8%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
+ L A+ +V NG D VV + +++ + G+ ++ +++FD M +N V WTAL+SG+
Sbjct: 207 RQLHAHFVVSPYNGDD-VVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYAS 265
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV-TFSS 189
+GR EE++ F P +N+ +WTA I G V G S A++LF+++ GV+ ++ S
Sbjct: 266 NGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSI 325
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ A++ F LG + G + GF ++ V N+LI + K ++ AR VF+ + RD
Sbjct: 326 VIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRD 385
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFR 305
V+SWT ++ + G EA ++D M + NEV++ +I + +G ++ +LF
Sbjct: 386 VISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFE 445
Query: 306 QM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYS 362
M Y P ++ L L+ RSG + A L + E D AL+ S
Sbjct: 446 SMKNEYGITPRLQHYTCYLDLLS-----RSGHLLEAEELMTTMPYEPDEATWGALL---S 497
Query: 363 KCGETKDGRL---VFDSIVEKDVAHVVSWNSMIGGYGLNGQ---MEEAKELFDNMPKRND 416
C + KD + + D ++E ++ + Y +NG+ + + ++ + R +
Sbjct: 498 ACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKVRKCMIGLEIRKE 557
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+S I +G ++F L A GE+P
Sbjct: 558 PGYSWIEAG----REFRLFHA--------GEVP 578
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
+ GR LHG ++ G + L+ MY L A E+ + + D++ M+
Sbjct: 337 VLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGE 396
Query: 98 IQWGNLEEAQRLFDGM----PERNEVSWTALISGFMKHGRVEESMWYFE--RNPF---QN 148
Q G EEA L+D M + NEV++ LI G V++ FE +N +
Sbjct: 397 AQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPR 456
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ +T + ++G EA +L + +P+E T+ ++ AC + D + + +
Sbjct: 457 LQHYTCYLDLLSRSGHLLEAEELMTTM---PYEPDEATWGALLSACTKYKDAEMCIRI 511
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 10/219 (4%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ +H +I+K G + AL YAKS + + +FD P ++ ++ ++ ++ S
Sbjct: 105 RGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHS 164
Query: 531 GYAKESINLFEEM-EKTSITPNELTILSV--LFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ ++ + M ++ P+ I SV +FA S + + L + P YN
Sbjct: 165 ASPELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSP-YNGDDV 223
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
+ + +VDM + G + +SM + +S W +L+SG Y + +E A++
Sbjct: 224 VK--SSLVDMYCKCGSPDDGRKVFDSMSAK-NSVVWTALVSG---YASNGRSEEALQLFR 277
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
+ + + L + + G + A+ + M G+R
Sbjct: 278 SMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVR 316
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 262/463 (56%), Gaps = 8/463 (1%)
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT----- 308
T ++DV G+ A +F + + N ++ MI Y + A +++QM
Sbjct: 50 TKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHG 109
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
P+ F V+ + A L G VH HV K G + + + N+L+++Y KC
Sbjct: 110 ENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLD 169
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
D VF+ + E+D VSWN++I G+ GQM A+ +F+ M + SW+AI+SGY
Sbjct: 170 DAHRVFEEMTERDA---VSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYAR 226
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ F M + G P++ + SVL A + +LE GK +H K GF ++ +
Sbjct: 227 IGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICV 286
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
AL + YAK G I+ RR+FD+M +++ ISW+ M+ GLA G A+E+I LF+EM+K I
Sbjct: 287 CNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKI 346
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
P+ +T + +L AC+H+GL+++GL+YF SM+ YNI+P HY C+V++L SGRL +A
Sbjct: 347 EPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQAL 406
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ + MP +PDS W SLLS C+++ N +IA A+++L +L YVLLSN+YA G
Sbjct: 407 ELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLG 466
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+W +RKLM K ++K+ GCS +EV N V F D P
Sbjct: 467 KWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDSKP 509
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 183/387 (47%), Gaps = 63/387 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LKD + +++ + +H H++K + + +L T+
Sbjct: 20 ILKDCPN---IVELKKIHAHIVKFSLSQSSFLVTK------------------------- 51
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
M++ +G E A LF G+ + N + A+I + KH +V
Sbjct: 52 ------MVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAY-KHNKV------------ 92
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ AI + Q + E+ + P++ TF + K+CA + + LG V
Sbjct: 93 -----YVLAITVYKQMLGNPHG--------ENPIFPDKFTFPFVVKSCAGLMCYDLGKQV 139
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G +FK G + + V NSL+ + +K +D A VF+ M +RD VSW ++ + +G +
Sbjct: 140 HGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQM 199
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
AR IF+EM ++ SW+ +++ Y + G +A FR+M +P+ VL
Sbjct: 200 RRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDC 259
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L AL G +H + K G +++ + NALI++Y+KCG GR +FD + E+D V+
Sbjct: 260 AQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERD---VI 316
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPK 413
SW++MI G +G+ EA ELF M K
Sbjct: 317 SWSTMIVGLANHGRAREAIELFQEMQK 343
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 135/245 (55%), Gaps = 5/245 (2%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
VV N ++ ++ +L++A R+F+ M ER+ VSW LISG ++ G++ + FE +
Sbjct: 153 VVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDK 212
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+ SWTA + G+ + G +AL+ F ++ G++P+E++ S+ CA++ LG +
Sbjct: 213 TIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIH 272
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
KAGF +++ VCN+LI + K G +D R +FD+M++RDV+SW+ ++ G
Sbjct: 273 IYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAR 332
Query: 268 EARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIV 322
EA +F EM E + +++ ++ +G E R F M R Y+ +P + +
Sbjct: 333 EAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCL 392
Query: 323 LSALA 327
++ L
Sbjct: 393 VNLLG 397
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 163/400 (40%), Gaps = 90/400 (22%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HAH++K + + F+ ++D+ + GET+ L+F + +
Sbjct: 33 IHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADP----------------- 75
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML--LSGE---IPNKS 452
N ++A+I Y +K + L V+ +ML GE P+K
Sbjct: 76 -----------------NAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKF 118
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS------------- 499
TF V+ + A + + GK +HG + K G + + +L + Y K
Sbjct: 119 TFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEM 178
Query: 500 ------------------GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
G + +R +F+ M DK SWT +V G A G +++ F
Sbjct: 179 TERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFR 238
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDM 597
M+ I P+E++++SVL C+ G ++ G K+ + IY K CV ++M
Sbjct: 239 RMQMVGIEPDEISLVSVLPDCAQLGALELG-KWIH----IYADKAGFLRNICVCNALIEM 293
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA-- 655
++ G + + + M E D +W++++ G + + A + + K A+ P+
Sbjct: 294 YAKCGSIDQGRRLFDQMK-ERDVISWSTMIVGLANHGRAREAIELFQEMQK-AKIEPSII 351
Query: 656 GYVLLSNIYASAG------RWIDAMNVRKLMTEKGLRKSG 689
+V L A AG R+ ++M R E G+ G
Sbjct: 352 TFVGLLTACAHAGLLNEGLRYFESMK-RDYNIEPGVEHYG 390
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 10/220 (4%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
K +H I+K FL T + D G+ E + +F + D N + M+R +
Sbjct: 31 KKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHN 90
Query: 531 GYAKESINLFEEM-----EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
+I ++++M + I P++ T V+ +C+ D G K + + K
Sbjct: 91 KVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLG-KQVHGHVFKFGQK 149
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
N +V+M + L +A M E D+ +W +L+SG + RA
Sbjct: 150 SNTVVENSLVEMYVKCDSLDDAHRVFEEMT-ERDAVSWNTLISG---HVRLGQMRRARAI 205
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
++ ++ + + + YA G + DA+ + M G+
Sbjct: 206 FEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGI 245
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 203/717 (28%), Positives = 349/717 (48%), Gaps = 113/717 (15%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL-NGFDLVVHNCMINA- 96
+G+ +H ++++ ++ + +L T L+ Y + EA + K L + ++V N MI
Sbjct: 157 EGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGF 216
Query: 97 --NIQWGNLEE---------------------------------AQRLFDGMP---ERNE 118
N W N E Q D + E +
Sbjct: 217 GENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDP 276
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
T+L++ + K +E + F P + + W A I +V NG++++AL+++ ++
Sbjct: 277 YVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQM--- 333
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
K C ++D ++ N L + S+ G DL
Sbjct: 334 -------------KLCTVLSD------------------SFTILNVLTSSSMA-GLYDLG 361
Query: 239 RSVFDRMEKRDVVS----WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
R + + KR + S + +L ++ + GD A IF M ER+ V+W +I+ + Q+
Sbjct: 362 RLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQN 421
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
+EA FR M KP++ + ++SA L+ + G +H V+K G++ DVF++
Sbjct: 422 RKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVA 481
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
++L+D+YSK G E A +F +MP +
Sbjct: 482 SSLLDMYSKFGFP----------------------------------ERAGNIFSDMPLK 507
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
N V+W++IIS Y + DL +F+++L + P+ +F+SVL A +SVA+L KGK +H
Sbjct: 508 NLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVH 567
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
G +++L P+D+ + L D Y K G ++ ++ +F+R+ +KN ++W M+ G G
Sbjct: 568 GYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECS 627
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
++I LF+EM + I P+++T LS+L +C+HSGL+++GL F M+ + I+P HY +
Sbjct: 628 KAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNI 687
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+ R+G L +A F+ +MP EPD + W SLL CK + N ++ E L +
Sbjct: 688 VDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKG 747
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ YV L N+Y A W N+R M EKGL+K+ GCSW+EVRN+V F+ +P
Sbjct: 748 SNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSP 804
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/628 (24%), Positives = 280/628 (44%), Gaps = 92/628 (14%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL--NG 84
LLK S + + G+ +H +I TG+H ++Y+T+ L+ +Y+ +A ++ L +G
Sbjct: 59 LLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSG 118
Query: 85 F---DLVVHNCMINANIQWGNLEEAQRLFDGMPE--------------RNEVSW-----T 122
D+ + N +I+ ++G LEE F M RN +++ T
Sbjct: 119 VSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNFDPFLET 178
Query: 123 ALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
ALI + K GR E+ + F++ N+++W I GF +NG +L+ +L VK
Sbjct: 179 ALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVK 238
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+F+ AC + G V K GFE V SL+T+ K ++ A V
Sbjct: 239 VVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKV 298
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+ + +++ W ++ ++ G +A RI+ +M +S ++F
Sbjct: 299 FNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLS---------------DSF 343
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+ +T S++A L L G +H ++K ++ + I +AL+ +Y
Sbjct: 344 TILNVLTS--------------SSMAGLYDL--GRLIHTEIVKRPLQSSITIQSALLTMY 387
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SK G++ +F ++ E+D VV+W S+I G+ N + +EA + F M
Sbjct: 388 SKFGDSNYANSIFSTMKERD---VVAWGSVISGFCQNRKYKEALDFFRAM---------- 434
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ DLV P+ +S++ A + ++ G +HG +IK G
Sbjct: 435 ---------EADLV------------KPDSDIMASIISACTGLEKVDLGCTIHGFVIKSG 473
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DVF+ ++L D Y+K G E + +F MP KN ++W ++ + SINLF
Sbjct: 474 LQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFS 533
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
++ + + P+ ++ SVL A S + KG + ++ I + + ++DM +
Sbjct: 534 QVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW-IPFDLQVENTLIDMYIKC 592
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSG 629
G L A+ + E + AW S++ G
Sbjct: 593 GLLKYAQHIFERIS-EKNLVAWNSMIGG 619
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 204/442 (46%), Gaps = 77/442 (17%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C L V G+ +H IK G + Y+ T LL MY + A ++ ++
Sbjct: 246 CTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDK 305
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGM-------------------------------- 113
++ + N +I+A + G +A R++ M
Sbjct: 306 EIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIH 365
Query: 114 ------PERNEVS-WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
P ++ ++ +AL++ + K G + F ++V++W + I GF QN
Sbjct: 366 TEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYK 425
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EAL F + VKP+ +SI AC + LG ++ G + K+G + V V +SL+
Sbjct: 426 EALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLL 485
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+ K G + A ++F M +++V+W I
Sbjct: 486 DMYSKFGFPERAGNIFSDMPLKNLVAWNSI------------------------------ 515
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
I+ Y ++ P+ + LF Q+ R P++ F+ VL+A++S+ AL G VH +++++
Sbjct: 516 -ISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW 574
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
I D+ + N LID+Y KCG K + +F+ I EK+ +V+WNSMIGGYG +G+ +A E
Sbjct: 575 IPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKN---LVAWNSMIGGYGSHGECSKAIE 631
Query: 407 LFDNMP----KRNDVSWSAIIS 424
LFD M K +DV++ +++S
Sbjct: 632 LFDEMRSSGIKPDDVTFLSLLS 653
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 220/529 (41%), Gaps = 95/529 (17%)
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
I VQ EALKL+ K S V T+ S+ KACA +++ + G ++ I G
Sbjct: 28 IKSLVQQRQYIEALKLYTK---SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR-----DVVSWTVILDVFIEMGDL---- 266
+ +SLI + +K G A VFD++ K DV W I+D + G L
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144
Query: 267 ----------------------------------------------GEARRIFDEMPER- 279
EAR +F ++ +R
Sbjct: 145 VQFGRMQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRS 204
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
N V+W+VMI + ++G E + + + K +S F+ LSA + + G VH
Sbjct: 205 NIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVH 264
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+K+G E D ++ +L+ +Y KC + VF+ + +K++ WN++I Y NG
Sbjct: 265 CDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIEL---WNALISAYVGNG 321
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+A ++ +M L + + T +VL
Sbjct: 322 YAYDA-------------------------------LRIYKQMKLCTVLSDSFTILNVLT 350
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
+S+ + G+ +H +I+K + + +AL Y+K GD + +F M +++ ++
Sbjct: 351 SSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVA 410
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W ++ G ++ KE+++ F ME + P+ + S++ AC+ VD G +
Sbjct: 411 WGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCT-IHGFV 469
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++ + + ++DM S+ G A + + MP + + AW S++S
Sbjct: 470 IKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK-NLVAWNSIIS 517
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 92/251 (36%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L I+S +++G+++HG+L++ I FD
Sbjct: 550 VLAAISSVAALLKGKSVHGYLVRLWIP-------------------------------FD 578
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V N +I+ I+ G L+ AQ +F+ + E+N V+W ++I G+ HG
Sbjct: 579 LQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECS----------- 627
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+A++LF ++ SG+KP++VTF S+ +C GL +
Sbjct: 628 --------------------KAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHL 667
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
F + + +K G + RME + I+D++ G L
Sbjct: 668 FEM------------------MKMKFG-------IEPRMEH-----YVNIVDLYGRAGCL 697
Query: 267 GEARRIFDEMP 277
G+A MP
Sbjct: 698 GDAYSFVKNMP 708
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 28/183 (15%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T+ S+L A AS+++L+ GK +H II G D ++ ++L + Y K G + +VFD++
Sbjct: 55 TYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQL 114
Query: 513 PDKNEIS------WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
P K+ +S W ++ G G +E + F M+ + + HS
Sbjct: 115 P-KSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQI---------HSY 164
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+V L + +E T ++D + GR +EA + + AW +
Sbjct: 165 IVRNMLNFDPFLE------------TALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVM 212
Query: 627 LSG 629
+ G
Sbjct: 213 IGG 215
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 323/602 (53%), Gaps = 54/602 (8%)
Query: 114 PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFL 173
P + W LI K G++ E+ F+ P ++V++WT I G+++ G EA +LF
Sbjct: 44 PRVPQPEW--LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD 101
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
++ + N VT++++ LS+ ++F+ E++V N++I + G
Sbjct: 102 RV---DSRKNVVTWTAMVSGYLRSKQ----LSIAEMLFQEMPERNVVSWNTMIDGYAQSG 154
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+D A +FD M +R++VSW ++ ++ G + EA +F+ MP R+ VSW+ M+ +
Sbjct: 155 RIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAK 214
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
+G +EA RLF M E+++
Sbjct: 215 NGKVDEARRLFDCMP---------------------------------------ERNIIS 235
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
NA+I Y++ + +F + E+D A SWN+MI G+ N +M +A LFD MP+
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPERDFA---SWNTMITGFIRNREMNKACGLFDRMPE 292
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKD 472
+N +SW+ +I+GY+E+K+ + VF++ML G + PN T+ S+L A + +A L +G+
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR--MPDKNEISWTVMVRGLAES 530
+H I K + + +AL + Y+KSG++ ++R++FD + ++ ISW M+ A
Sbjct: 353 IHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G+ KE+I ++ +M K P+ +T L++LFACSH+GLV+KG+++F + ++ H
Sbjct: 413 GHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEH 472
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
YTC+VD+ R+GRL + +FIN + + ++LS C + IA+ VK + +
Sbjct: 473 YTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG 532
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+ YVL+SNIYA+ G+ +A +R M EKGL+K GCSWV+V Q H F +
Sbjct: 533 SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSH 592
Query: 711 PK 712
P+
Sbjct: 593 PQ 594
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 188/357 (52%), Gaps = 45/357 (12%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T ++ YL S++ A + +++ ++V N MI+ Q G +++A LFD MPERN V
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +++ ++ GR++E+M FER P ++V+SWTA + G +NG EA +LF
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF------- 225
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
C E+++ N++IT + +D A
Sbjct: 226 -------------DCMP-------------------ERNIISWNAMITGYAQNNRIDEAD 253
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+F M +RD SW ++ FI ++ +A +FD MPE+N +SW+ MI Y ++ EE
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 300 AFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A +F +M R S KPN + +LSA + L L G +H + K +K+ +++AL+
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 359 DLYSKCGETKDGRLVFDS--IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
++YSK GE R +FD+ + ++D ++SWNSMI Y +G +EA E+++ M K
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRD---LISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 284/529 (53%), Gaps = 36/529 (6%)
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
D R G V K GF ++ + N+L+ + G V AR VFD D VSW IL
Sbjct: 121 DAREGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWDAVSWNTILA 180
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF---RQMTRYSFKPN 315
++ GD+ +A +F MPER+ + S M+A + ++G EEA +F +++
Sbjct: 181 TYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAFTWTAM 240
Query: 316 TSCFS----------------------------IVLSALASLKALRSGMHVHAHVLKIGI 347
SCF V++A A + +++G H V++ G+
Sbjct: 241 ISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVRAGL 300
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
V + NALI +YS C + R +FDS + + H SWNSMI GY NG++E+AK L
Sbjct: 301 GSRVNVQNALIHMYSSCLDVVAARRLFDS--SESLDH-FSWNSMISGYLKNGRVEDAKAL 357
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ MP +++VSWSA+I+G +++ Q VF+ M P++ T SV+ A ++ +L
Sbjct: 358 FNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCAL 417
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E+GK +H I + + + LGT+L D Y K G +E++ VFD + +K W ++ GL
Sbjct: 418 EQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTPCWNAVIVGL 477
Query: 528 AESGYAKESINLFEEMEKTSIT-PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
A +G S+++F EME + I P+E+T VL AC H GLV++G ++F M+ Y I P
Sbjct: 478 AMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIIP 537
Query: 587 NGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL 646
N RHY C+VD+L R+G + EAED I SMP PD AW +LL C + + ++ ER K L
Sbjct: 538 NIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAWGALLGACWKHSDSEVGERVGKKL 597
Query: 647 WKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
KL H +LSNIYAS G W ++R M + + K GCS VE
Sbjct: 598 VKLDPHHDGFQTMLSNIYASEGMWQCVKDLRGSMKQH-VAKVAGCSVVE 645
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/579 (26%), Positives = 258/579 (44%), Gaps = 95/579 (16%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMY------LGSRKSLEANEIVKDLNGFDLVVHNC 92
+GR +H H +K G YL L+ MY G+R+ +A + +D V N
Sbjct: 124 EGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPV------WDAVSWNT 177
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
++ ++ G++E+A +F MPER+ + +++++ F + G VEE+ F+ ++ +W
Sbjct: 178 ILATYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAFTW 237
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
TA I F +N EAL +F + E G +E S+ ACA+ + G GL+ +
Sbjct: 238 TAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVR 297
Query: 213 AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRI 272
AG V+V N+LI + +V AR +FD E D SW ++ +++ G + +A+ +
Sbjct: 298 AGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKAL 357
Query: 273 FDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL 332
F+ MP+++ VSWS MIA Q+ EA +F M + KP+ V+SA +L AL
Sbjct: 358 FNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCAL 417
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G VH ++ + + + +LID+Y KCG + VFD + EK WN++I
Sbjct: 418 EQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTP---CWNAVI 474
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG-EIPNK 451
G +NG L + D+ F+EM SG +P++
Sbjct: 475 VGLAMNG---------------------------LVTRSLDM----FSEMETSGIAVPSE 503
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF+ VL A HG G +E R+ F
Sbjct: 504 ITFTGVLSACR-----------HG------------------------GLVEEGRQFFKL 528
Query: 512 MPDKNEI-----SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
M +K +I + MV L +GY +E+ +L + M + P +L + S S
Sbjct: 529 MQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAWGALLGACWKHSDSE 588
Query: 567 LVDKGLKYFNSMEP--------IYNIKPNGRHYTCVVDM 597
+ ++ K ++P + NI + + CV D+
Sbjct: 589 VGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVKDL 627
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 161/384 (41%), Gaps = 41/384 (10%)
Query: 37 VIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMIN 95
VIQ G HG +++ G+ + L+ MY + A + D N MI+
Sbjct: 284 VIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMIS 343
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
++ G +E+A+ LF+ MP+++ VSW+A+I+
Sbjct: 344 GYLKNGRVEDAKALFNVMPDKDNVSWSAMIA----------------------------- 374
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
G VQN S EAL +F + +KP+EVT S+ AC + G V I + +
Sbjct: 375 --GCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQY 432
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ + SLI + +K G ++ A VFD +E++ W ++ G + + +F E
Sbjct: 433 NITIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSE 492
Query: 276 MPER-----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASL 329
M +E++++ +++ G EE + F+ M +Y PN + ++ L
Sbjct: 493 METSGIAVPSEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRA 552
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+R + + + + DV AL+ K +++ G V +V+ D H
Sbjct: 553 GYVREAEDL---IQSMPMSPDVPAWGALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQT 609
Query: 390 SMIGGYGLNGQMEEAKELFDNMPK 413
+ Y G + K+L +M +
Sbjct: 610 MLSNIYASEGMWQCVKDLRGSMKQ 633
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 285/573 (49%), Gaps = 64/573 (11%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T +++ + + G V+ + F+ +++++W+A I FVQ+G+ EAL LF + G++
Sbjct: 27 TPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQ 86
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N+V S ACAE++ +LG S+ KA + +SV +L+++ K G LA +
Sbjct: 87 ANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALT- 145
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
+F+ MP ++ V+W+ MI Y Q G P A
Sbjct: 146 ------------------------------LFNRMPCKDVVTWNAMINGYAQIGEPFPAL 175
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F ++ PN+ +L A A L L G +H ++K G E + + ALID+Y
Sbjct: 176 EMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMY 235
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG +F ++++VSW+
Sbjct: 236 AKCGSLSGAEFLFHR---------------------------------TGCRKDEVSWNV 262
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+I+GY+ F+ F +M L PN T +VL A A +++L G LH +I++G
Sbjct: 263 MIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMG 322
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
F +G L D YAK G ++ S ++F M +K+ +SW VM+ G A G +I LF
Sbjct: 323 FQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFS 382
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M+ + I + + ++VL AC H+GL+ +G K F+SM + ++P+ HY C+ D+L R+
Sbjct: 383 RMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRA 442
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G +E D I SMP EPD+ W +LL + N Q+AE A+ +L KL ++ Y LS
Sbjct: 443 GLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNLTHYAALS 502
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N YA +GRW D N R +T+ GLRKS G SWV
Sbjct: 503 NTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 194/390 (49%), Gaps = 53/390 (13%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
DV T I+ ++ G++ A+++F E+ R+ V+WS +IA + QSGYP+EA LFR M
Sbjct: 22 DVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQ 81
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+ N L A A + +L+ G +H +K ++ D+ + AL+ +Y+KCG
Sbjct: 82 NEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFA 141
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+F+ + KD VV+WN+MI GY G+ A E+
Sbjct: 142 LALTLFNRMPCKD---VVTWNAMINGYAQIGEPFPALEM--------------------- 177
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
F+++ LS PN T +L A A + L++G +HGKIIK GF + +
Sbjct: 178 ----------FHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHV 227
Query: 489 GTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
TAL D YAK G + + +F R K+E+SW VM+ G SG+A ++ + F +M+ +
Sbjct: 228 KTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLEN 287
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKY--------FNSMEPIYNIKPNGRHYTCVVDMLS 599
I PN +TI++VL A +H + G+ F S P+ N C++DM +
Sbjct: 288 IQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGN---------CLIDMYA 338
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ G L +E + M D+ +W +L+G
Sbjct: 339 KCGWLDHSEKIFHEMK-NKDTVSWNVMLAG 367
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 186/413 (45%), Gaps = 74/413 (17%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +H + GI + + T ++ MY + A ++ +++ G DLV + +I A +
Sbjct: 6 RGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFV 65
Query: 99 QWGNLEEAQRLFDGM----------------PERNEVS---------------------- 120
Q G +EA LF M P EVS
Sbjct: 66 QSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDIS 125
Query: 121 -WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
TAL+S + K G ++ F R P ++V++W A I G+ Q G F AL++F KL S
Sbjct: 126 VGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSE 185
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
+ PN T + A A +ND G + G I K GFE V +LI + K G + A
Sbjct: 186 LNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAE 245
Query: 240 SVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+F R ++D VSW +VMIA Y SG+
Sbjct: 246 FLFHRTGCRKDEVSW-------------------------------NVMIAGYMHSGHAI 274
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
+AF F QM + +PN VL A+A L ALR+GM +HA+V+++G + + N LI
Sbjct: 275 DAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLI 334
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
D+Y+KCG +F + KD VSWN M+ GY ++G+ A ELF M
Sbjct: 335 DMYAKCGWLDHSEKIFHEMKNKD---TVSWNVMLAGYAVHGRGSCAIELFSRM 384
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
+L +G ++H + G DV + T + YA+ G++++++++F + ++ ++W+ ++
Sbjct: 3 ALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIA 62
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
+SGY +E+++LF M+ + N++ +LS L AC+ + G K + N+
Sbjct: 63 AFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLG-KSMHCCAVKANVD 121
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ T +V M ++ G + A N MP + D W ++++G
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCK-DVVTWNAMING 164
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 16/209 (7%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V NC+I+ + G L+ ++++F M ++ VSW +++G+ HGR ++ F R
Sbjct: 329 VGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSE 388
Query: 149 V----ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
+ S+ + G E K+F +S K +++ AC R GL
Sbjct: 389 IRLDSFSFINVLSACRHAGLIGEGRKIF----DSMSKQHQLEPDLEHYACMADLLGRAGL 444
Query: 205 --SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV---FDRMEKRDVVSWTVILDV 259
V LI E V +L+ S V LA D++E +++ + + +
Sbjct: 445 FNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNLTHYAALSNT 504
Query: 260 FIEMG---DLGEARRIFDEMPERNEVSWS 285
+ G D+G R + R +S
Sbjct: 505 YARSGRWADVGNTRSKITKTGLRKSPGYS 533
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 268/487 (55%), Gaps = 40/487 (8%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM----TRYSFKPNTSCF 319
G + A +FD++P + ++ +I + P +A L+ +M +P+ F
Sbjct: 56 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 115
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK------DGRLV 373
VL A ++ A +G+ VHAHV+K G E D F+ NALI +++ CG DGR
Sbjct: 116 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 175
Query: 374 FDSIV----------------------EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
D++ E V +VSWN MI Y G M A+ELFD +
Sbjct: 176 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 235
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
P+R+ VSW+ +ISGY+ +F +M GE P+ T S+L A A L+ G+
Sbjct: 236 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQ 295
Query: 472 DLHGKIIKL----GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
LH + + GFP V LG AL D YAK G ++S+ VF M DK+ +W +V GL
Sbjct: 296 RLHSSLSDMFSRNGFP--VVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGL 353
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A G+ ESI++FE+M K + P+E+T ++VL ACSH G+VDKG ++FN M+ Y ++PN
Sbjct: 354 ALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPN 413
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
+HY C+VDML R+G L EA +FI++M EP+S W +LLS C+ + ++A+ A + L
Sbjct: 414 IKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLL 473
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE--VRNQVHFFFQ 705
K + YVLLSNIYAS G W + +RKLM + G+ K G ++V+ V++ + F Q
Sbjct: 474 KARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFVDGSVKDIIQSFGQ 533
Query: 706 KTDHNPK 712
H+ +
Sbjct: 534 SRSHSER 540
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 156/319 (48%), Gaps = 40/319 (12%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG----VKPNEVTF 187
G + + F++ P + + I G +A+ L+ ++L G V+P+++TF
Sbjct: 56 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 115
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI--------------------- 226
+ +AC + G+ V + KAG E V N+LI
Sbjct: 116 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 175
Query: 227 ----------TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
T + G++ AR +FD +D+VSW V++ + + GD+ AR +FD++
Sbjct: 176 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 235
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
PER+ VSW+VMI+ Y + G A LF QM R KP+ +LSA A L G
Sbjct: 236 PERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQ 295
Query: 337 HVHAHVLKIGIEKD--VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+H+ + + V + NALID+Y+KCG K VF S+ +KDV+ +WNS++GG
Sbjct: 296 RLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVS---TWNSIVGG 352
Query: 395 YGLNGQMEEAKELFDNMPK 413
L+G + E+ ++F+ M K
Sbjct: 353 LALHGHVLESIDMFEKMLK 371
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 11/316 (3%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ T+ G +H H++K G + ++ L+ M+ A + D
Sbjct: 118 VLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRARED 177
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V + MI + G++ A+ LFD P ++ VSW +I+ + K G + + F++ P
Sbjct: 178 AVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPE 237
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF----RL 202
++V+SW I G+V+ G AL+LF ++ G KP+ VT S+ ACA+ D RL
Sbjct: 238 RDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRL 297
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
S+ + + GF V + N+LI + K G + A VF M +DV +W I+
Sbjct: 298 HSSLSDMFSRNGFP--VVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLAL 355
Query: 263 MGDLGEARRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTS 317
G + E+ +F++M + +E+++ ++ + G ++ F M +Y +PN
Sbjct: 356 HGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIK 415
Query: 318 CFSIVLSALASLKALR 333
+ ++ L L+
Sbjct: 416 HYGCMVDMLGRAGLLK 431
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Query: 466 SLEKGKDLHGKIIKLGFPYDV--FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
SL K +H + GF D A G I + VFD++P + + +
Sbjct: 20 SLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTL 79
Query: 524 VRGLAESGYAKESINLFEEM----EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
+RG A + +++++L+ M + P++LT VL AC+ G D G++ +
Sbjct: 80 IRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVV 139
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
+ + ++ M + G L A + E D+ AW+++++GC
Sbjct: 140 KA-GCESDAFVKNALIGMHASCGNLGIAAALFDGRARE-DAVAWSAMITGC 188
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLL---IMYLGSRKSLEANEIV-KDLNG 84
KD+++ N ++ G ALHGH++++ E+ L ++ I ++ + +V K
Sbjct: 341 KDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREF 400
Query: 85 FDLVVH-----------NCMINANIQWGNLEEAQRLFDGMP-ERNEVSWTALISGFMKHG 132
F+L+ H CM++ + G L+EA D M E N V W L+S HG
Sbjct: 401 FNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 460
Query: 133 RVE 135
+E
Sbjct: 461 EIE 463
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 306/578 (52%), Gaps = 66/578 (11%)
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ NPF W A I F EA +F +LE+GV ++ +FS + KAC+ + +
Sbjct: 140 QDNPFL----WNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLIK 195
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G+ + GL+ V + N L+ L L+ G + +AR +FDRM RD VS+ ++D ++
Sbjct: 196 EGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYV 255
Query: 262 EMGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPEEAFR----LFRQMTRYSFKPN 315
+ G + AR +FD MP ++N +SW+ MI+ Y +S EE R LF +M +
Sbjct: 256 KHGMVKSARELFDVMPMEQKNLISWNSMISGYARS---EEGLRVAWELFEEMPK------ 306
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+D+ N++ID KCG+ ++ +F+
Sbjct: 307 ---------------------------------RDLISWNSMIDGCVKCGKMENAHHLFN 333
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ ++DV VSW +M+ GY G+++ A+ LFD MP+R+ +S +A+++GY+++
Sbjct: 334 XMPKRDV---VSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEA 390
Query: 436 FAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F++ML E+ P +T L A A + ++G LH I GF LG AL D
Sbjct: 391 LXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGXALID 450
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G I+++ + D W ++ GLA G + + LF EMEK + PB++T
Sbjct: 451 MYAKCGSIDNA--LIDH--------WNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDIT 500
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ VL AC+H+GLV +GL F M ++ ++P +HY C+VD+L R+G + E + F+ M
Sbjct: 501 FIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVDILGRAGHVEEXKKFVEKM 560
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
P EP+ W +LLS C+ ++N I E K+L + +P+ YVLLSNIYA G W D
Sbjct: 561 PIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAXFGMWNDVY 620
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R +M ++ L+K GCS +E+ VH FF + +P+
Sbjct: 621 RIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQ 658
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 221/494 (44%), Gaps = 108/494 (21%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G D+ + NC++ ++ G L A++LFD M R+ VS+ ++I G++KHG V+ + F+
Sbjct: 210 GSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDV 269
Query: 144 NPFQ--NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
P + N+ISW + I G+ + S E L++ +L E K + ++++S+ C
Sbjct: 270 MPMEQKNLISWNSMISGYAR---SEEGLRVAWELFEEMPKRDLISWNSMIDGC------- 319
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+K G+++ A +F+ M KRDVVSW ++D +
Sbjct: 320 ----------------------------VKCGKMENAHHLFNXMPKRDVVSWANMVDGYA 351
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFS 320
++G++ AR +FDEMPER+ +S + M+A Y Q+G EA F M + P +
Sbjct: 352 KLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLL 411
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
I LSA+A L G+ +H ++ G + ALID+Y+KCG
Sbjct: 412 ITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGXALIDMYAKCGSI------------- 458
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D A + WN++J G ++G E A ELF M K +F
Sbjct: 459 DNALIDHWNAIJXGLAIHGLGEVAFELFMEMEK---------------------LFVK-- 495
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKG-------KDLHGKIIKLGFPYDVFLGTALT 493
PB TF VL A +++G + +H KL +
Sbjct: 496 --------PBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQH------YGCMV 541
Query: 494 DTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT--- 549
D ++G +E ++ ++MP + N++ W R L + E+ + E + K I+
Sbjct: 542 DILGRAGHVEEXKKFVEKMPIEPNDVVW----RTLLSACRNHENFTIGEPVAKHLISVDS 597
Query: 550 --PNELTILSVLFA 561
P+ +LS ++A
Sbjct: 598 YNPSSYVLLSNIYA 611
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 152/360 (42%), Gaps = 76/360 (21%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
E+ +++ DL+ N MI+ ++ G +E A LF+ MP+R+ VSW ++ G+ K G ++
Sbjct: 299 ELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDI 358
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACA 195
+ F+ P ++VIS A + G+VQNG EAL F +L + P T A A
Sbjct: 359 ARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIA 418
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
++ F G+++ I GF +LS K+G
Sbjct: 419 QLGHFDEGVALHCYIEDNGF-----------SLSEKLG--------------------XA 447
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++D++ + G + A + D W+ +J G E AF LF +M + KPB
Sbjct: 448 LIDMYAKCGSIDNA--LIDH--------WNAIJXGLAIHGLGEVAFELFMEMEKLFVKPB 497
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
F VL+A HA G+ K+ + L+ K
Sbjct: 498 DITFIGVLNACN-----------HA-----GLVKEGLMXFXLMRXVHK------------ 529
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
VE + H + M+ G G +EE K+ + MP + NDV W ++S H+ F +
Sbjct: 530 --VEPKLQH---YGCMVDILGRAGHVEEXKKFVEKMPIEPNDVVWRTLLSACRNHENFTI 584
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 207/719 (28%), Positives = 342/719 (47%), Gaps = 118/719 (16%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
H +++K G + +L L+ +Y+ + A ++ ++ + V C+I+ Q G
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 103 LEEA-----QRLFDG-MPER-----------NEVSW------------------------ 121
E+A + +F+G +P R + W
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
LI+ + K G ++ + F ++ +SW + I G QN +A+K + + ++G+
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ S +CA + LG G K G + VSV N+L+ L
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLAL------------- 248
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP-EEA 300
+ E L E +++F M ER++VSW+ +I SG EA
Sbjct: 249 ------------------YAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEA 290
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+F +M R + PN F +L+ ++SL + +HA +LK ++ D I NAL+
Sbjct: 291 IEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLAC 350
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSW 419
Y K +G+ME +E+F M +R D VSW
Sbjct: 351 YGK----------------------------------SGEMENCEEIFSRMSERRDEVSW 376
Query: 420 SAIISGYLEH----KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
+++ISGY+ + K DLV+ M+ G+ + TF++VL A A+VA+LE G ++H
Sbjct: 377 NSMISGYIHNELLCKAMDLVWL----MMQRGQRLDCFTFATVLSACATVATLECGMEVHA 432
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
I+ DV +G+AL D Y+K G I+ + R F+ MP +N SW M+ G A G+
Sbjct: 433 CAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDN 492
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
++ LF M+ + P+ +T + VL ACSH GLVD+G +YF SM +Y + P HY+C+V
Sbjct: 493 ALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMV 552
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC--KTYKNEQIAERAVKNLWKLAEEH 653
D+L R+G L + E+FIN MP +P+ W ++L C + ++ RA + L+ + ++
Sbjct: 553 DLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQN 612
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YVLLSN+YAS G+W D R+ M E ++K GCSWV +++ VH F + +P+
Sbjct: 613 AVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPE 671
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/475 (20%), Positives = 189/475 (39%), Gaps = 63/475 (13%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L S ++ G+ HG IK G+ + ++ LL +Y + + E ++ + D
Sbjct: 211 LSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQ 270
Query: 88 VVHNCMINANIQWG-NLEEAQRLFDGM------PER------------------------ 116
V N +I A G ++ EA +F M P R
Sbjct: 271 VSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHA 330
Query: 117 ---------NEVSWTALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGFVQNGFSF 166
+ AL++ + K G +E F R + ++ +SW + I G++ N
Sbjct: 331 LILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLC 390
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+A+ L +++ G + + TF+++ ACA + G+ V +A E V + ++L+
Sbjct: 391 KAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALV 450
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE----V 282
+ K G +D A F+ M R++ SW ++ + G A R+F M + +
Sbjct: 451 DMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHI 510
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
++ +++ + G +E F F+ MT Y P +S ++ L L +
Sbjct: 511 TFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDK---IENF 567
Query: 342 VLKIGIEKDVFISNALIDLYSKCG--ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ K+ I+ ++ I ++ + +T+ GR + + D + V++ + Y G
Sbjct: 568 INKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGG 627
Query: 400 QMEEAKELFDNM-----PKRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEM 442
+ E+ M K SW + ++G H + L++A E+
Sbjct: 628 KWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKEL 682
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 313/579 (54%), Gaps = 55/579 (9%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+P ++ SW A+ ++ EA+ ++++ SG +P+ F ++ KA + + D + G
Sbjct: 52 SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 204 LSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
+ K G+ V+V N+L+ + K G + D+ + ++ ++ +
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCG------GIGDK-----TFTNNALMAMYAK 160
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
+G + +++ +F+ +R+ VSW+ MI+ ++QS EA FR M + + + V
Sbjct: 161 LGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASV 220
Query: 323 LSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
L A + L+ L G +HA+VL+ + ++ F+ +AL+D+Y C + + GR V
Sbjct: 221 LPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRV-------- 272
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
FD++ R W+A+ISGY + + +F E
Sbjct: 273 --------------------------FDHILGRRIELWNAMISGYARNGLDEKALILFIE 306
Query: 442 ML-LSGEIPNKSTFSSVLCASA-SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M+ ++G +PN +T +SV+ A S+A++ KGK++H I+ D+ +G+AL D YAK
Sbjct: 307 MIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKC 366
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-----ITPNELT 554
G + SRRVF+ MP+KN I+W V++ G +E++ LF+ M + PNE+T
Sbjct: 367 GCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVT 426
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
++V ACSHSGL+ +GL F M+ + ++P HY CVVD+L R+G+L EA + +N+M
Sbjct: 427 FITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTM 486
Query: 615 PFEPDS-NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
P E D AW+SLL C+ ++N ++ E A KNL L + YVLLSNIY+SAG W A
Sbjct: 487 PAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKA 546
Query: 674 MNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
M VRK M + G++K GCSW+E R++VH F +P+
Sbjct: 547 MEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQ 585
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 146/291 (50%), Gaps = 35/291 (12%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL++ + K GRV++S FE ++++SW I F Q+ EAL F ++ GV+
Sbjct: 153 ALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVEL 212
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ VT +S+ AC+ + +G + + + N LI S
Sbjct: 213 DGVTIASVLPACSHLERLDVGKEIHAYVLRN---------NDLIENSF------------ 251
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ ++D++ + RR+FD + R W+ MI+ Y ++G E+A
Sbjct: 252 ---------VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALI 302
Query: 303 LFRQMTRYS-FKPNTSCFSIVLSA-LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF +M + + PNT+ + V+ A + SL A+ G +HA+ ++ + D+ + +AL+D+
Sbjct: 303 LFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDM 362
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
Y+KCG R VF+ + K+ V++WN +I G++G+ EEA ELF NM
Sbjct: 363 YAKCGCLNLSRRVFNEMPNKN---VITWNVLIMACGMHGKGEEALELFKNM 410
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 12/223 (5%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N +AL+ + +VE F+ + + W A I G+ +NG +AL LF++++
Sbjct: 249 NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMI 308
Query: 177 E-SGVKPNEVTFSSICKACAE-INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+ +G+ PN T +S+ AC + G + + ++V ++L+ + K G
Sbjct: 309 KVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGC 368
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM---------PERNEVSWS 285
++L+R VF+ M ++V++W V++ G EA +F M + NEV++
Sbjct: 369 LNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFI 428
Query: 286 VMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
+ A + SG E LF +M + +P + ++ V+ L
Sbjct: 429 TVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 471
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 38/249 (15%)
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
++++ D+ V + +++ + G L ++R+F+ MP +N ++W LI HG+ EE++
Sbjct: 345 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 404
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
F+N+++ + G EA KPNEVTF ++ AC+
Sbjct: 405 EL-----FKNMVA---------EAGRGGEA------------KPNEVTFITVFAACSHSG 438
Query: 199 DFRLGLSVF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM--EKRDVVSWTV 255
GL++F + G E ++ L + G+++ A + + M E V +W+
Sbjct: 439 LISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSS 498
Query: 256 ILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTR 309
+L +E+G++ A+ + P N S V+++ Y+ +G +A + + M +
Sbjct: 499 LLGACRIHQNVELGEVA-AKNLLHLEP--NVASHYVLLSNIYSSAGLWNKAMEVRKNMRQ 555
Query: 310 YSFKPNTSC 318
K C
Sbjct: 556 MGVKKEPGC 564
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 204/739 (27%), Positives = 346/739 (46%), Gaps = 113/739 (15%)
Query: 14 ETSFNSYIETC-LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKS 72
E + + ++ C LC+ D+ G+ +H K G+ + ++ + L+ +Y +
Sbjct: 213 EFTLATGLKACSLCMALDL--------GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEI 264
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGF 128
A+++ + + V N ++N Q G++ +LF M E NE + T ++ G
Sbjct: 265 ELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGC 324
Query: 129 -----MKHGRVEESMWY---FERNPF---------------------------QNVISWT 153
+K G+V S+ +E N F +++ W+
Sbjct: 325 ANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWS 384
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
A I Q G S E++KLF + PN+ T S+ A + + G S+ ++K
Sbjct: 385 ALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKY 444
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF 273
GFE V+V N+L+T+ +K G V + +++
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVH-------------------------------DGTKLY 473
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
+ M +R+ +SW+ ++ + G + +F M F PN F +L + + L +
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G VHAH++K ++ + F+ ALID+Y+KC +D DVA
Sbjct: 534 YGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA----------DVA---------- 573
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
F+ + R+ +W+ II+ Y + Q + F +M G PN+ T
Sbjct: 574 --------------FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ L +S+ASLE G+ LH + K G D+F+G+AL D YAK G +E + +F+ +
Sbjct: 620 LAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALI 679
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++ I+W ++ G A++G +++ F M I+P+ +T +L ACSH GLV++G +
Sbjct: 680 RRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+FNSM + I P H C+VD+L R G+ E EDFI M ++ W ++L K +
Sbjct: 740 HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMH 799
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
N + E+A L++L E + Y+LLSNI+A+ GRW D VR LM+ KG++K GCSW
Sbjct: 800 NNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSW 859
Query: 694 VEVRNQVHFFFQKTDHNPK 712
VE QVH F +P+
Sbjct: 860 VEANGQVHTFVSHDYSHPQ 878
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 166/640 (25%), Positives = 278/640 (43%), Gaps = 116/640 (18%)
Query: 7 SLFSINPETSFNSYIETCLCLL--KDITSQNLVIQGRALHG----------HLIKTGIHK 54
SL ++ + +++Y L + +D+ S +IQG G + GI
Sbjct: 152 SLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP 211
Query: 55 ERY-LTTRL----LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRL 109
+ L T L L M L K + A L DL V + +++ + G +E A ++
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLL-LDLFVGSALVDLYAKCGEIELASKM 270
Query: 110 FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
F GMPE+N+V+W L++G+ + G V L
Sbjct: 271 FIGMPEQNDVTWNVLLNGYAQRGDVT-------------------------------GVL 299
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
KLF ++E VK NE T +++ K CA + + G + LI K G+E + + L+ +
Sbjct: 300 KLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMY 359
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
K G A VF ++K D+V W S +I
Sbjct: 360 SKCGLAIDAIGVFKTIKKPDIVVW-------------------------------SALIT 388
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
+Q G EE+ +LF M PN +LSA + L+ G +HA V K G E
Sbjct: 389 CLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFET 448
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
DV +SNAL+ +Y K G DG +++S+V++D ++SWN
Sbjct: 449 DVAVSNALVTMYMKNGCVHDGTKLYESMVDRD---LISWN-------------------- 485
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
A +SG + +D +F ML G IPN TF S+L + + + +
Sbjct: 486 -----------AYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
G+ +H IIK + F+ TAL D YAK +E + F+R+ ++ +WTV++ A+
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
+ ++++N F +M++ + PNE T+ L CS ++ G + +SM +
Sbjct: 595 TNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG-QQLHSMVFKSGHVSDMF 653
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ +VDM ++ G + EAE ++ D+ AW +++ G
Sbjct: 654 VGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 240/533 (45%), Gaps = 72/533 (13%)
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W +L++ + K + + P ++V+SWTA I G V GF+ +++ LF ++ G+
Sbjct: 150 WVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGI 209
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
PNE T ++ KAC+ LG + FK G + V ++L+ L K GE++L
Sbjct: 210 MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIEL--- 266
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
A ++F MPE+N+V+W+V++ Y Q G
Sbjct: 267 ----------------------------ASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGV 298
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+LF M K N + VL A+ K L+ G +H+ ++K G E + FI L+D+
Sbjct: 299 LKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDM 358
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG D VF +I + D +V W+++I GQ EE+ +L
Sbjct: 359 YSKCGLAIDAIGVFKTIKKPD---IVVWSALITCLDQQGQSEESIKL------------- 402
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
F+ M L +PN+ T S+L A+ + +L+ G+ +H + K
Sbjct: 403 ------------------FHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKY 444
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF DV + AL Y K+G + ++++ M D++ ISW + GL + G + +F
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIF 504
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN-IKPNGRHYTCVVDMLS 599
M + PN T +S+L +CS V G + + I N + N T ++DM +
Sbjct: 505 YHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI--IKNQLDDNNFVCTALIDMYA 562
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
+ L +A+ N + D W +++ Y E+A+ ++ +E
Sbjct: 563 KCMYLEDADVAFNRLSVR-DLFTWTVIIT---NYAQTNQGEKALNYFRQMQQE 611
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 206/483 (42%), Gaps = 84/483 (17%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+SS+ + CA + ++ GLI K + SL+ + K AR V +M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
RDVVSWT ++ + G+ ++ LF++
Sbjct: 175 DRDVVSWTALIQGLVA-------------------------------EGFANDSIYLFQE 203
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M PN + L A + AL G +HA K+G+ D+F+ +AL+DLY+KCGE
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ +F + E++ V+WN ++ GY +R DV+
Sbjct: 264 IELASKMFIGMPEQN---DVTWNVLLNGYA----------------QRGDVTG------- 297
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
V +F M+ N+ T ++VL A+ +L++G+ +H IIK G+ +
Sbjct: 298 --------VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNE 349
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+G L D Y+K G + VF + + + W+ ++ L + G ++ESI LF M
Sbjct: 350 FIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLG 409
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI---YNIKPNGRHYTCVVDMLSRSGR 603
PN+ TI S+L A +++G L+Y S+ Y + + +V M ++G
Sbjct: 410 DTLPNQYTICSLLSAATNTG----NLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSG---CKTYKNEQIAERAVKNLWKLAEEH--PAGYV 658
+ + SM + D +W + LSG C Y +R + + + EE P Y
Sbjct: 466 VHDGTKLYESM-VDRDLISWNAYLSGLHDCGMY------DRPLTIFYHMLEEGFIPNMYT 518
Query: 659 LLS 661
+S
Sbjct: 519 FIS 521
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 177/360 (49%), Gaps = 41/360 (11%)
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+S K +S +L AS ++L +H ++K I D + +L+++Y+KC +
Sbjct: 106 WSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAY 165
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
RLV AK MP R+ VSW+A+I G +
Sbjct: 166 ARLVL-----------------------------AK-----MPDRDVVSWTALIQGLVAE 191
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+ +F EM G +PN+ T ++ L A + +L+ GK +H + KLG D+F+G
Sbjct: 192 GFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVG 251
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
+AL D YAK G+IE + ++F MP++N+++W V++ G A+ G + LF M + +
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
NE T+ +VL C++S + +G + +S+ + N +VDM S+ G +A
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK--NLWKLAEEHPAGYVLLSNIYASA 667
++ +PD W++L++ C + + +E ++K +L +L + P Y + S + A+
Sbjct: 371 VFKTIK-KPDIVVWSALIT-CLDQQGQ--SEESIKLFHLMRLGDTLPNQYTICSLLSAAT 426
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 215/750 (28%), Positives = 347/750 (46%), Gaps = 127/750 (16%)
Query: 19 SYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI 78
+ + C CL NL GR +H + + L L+ MY ++A +
Sbjct: 12 ALVNACSCL------GNLA-AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64
Query: 79 VKDL---NGFDLVVHNCMINANIQWGNLEEAQRLF-----DGMPERNEVSW--------- 121
L + D+V N MI+A ++ G+ EA +LF DG P N V++
Sbjct: 65 FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124
Query: 122 ----------------------------TALISGFMKHGRVEESMWYFERN----PFQNV 149
TAL+ + K G ++++ F R P ++
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
++ +A I QNG+ E+L+LF + G KP+ VT S+ AC+ + G
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLP--------VGS 236
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
E+ + V ++ RD V T +L + DL A
Sbjct: 237 ATAFVLEQAMEVVSA----------------------TRDNVLGTTLLTTYARSNDLSRA 274
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R FD + + VSW+ M A Y Q P EA LF +M +P+ + F L+A A+
Sbjct: 275 RATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAY 334
Query: 330 KALRS---GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI--VEKDVAH 384
+ G + + + + G+E D ++NA +++Y+KCG D R VF+ I +D
Sbjct: 335 PPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRD--- 391
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
++WNSM+ YG +G +EA ELF M V
Sbjct: 392 CITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVK-------------------------- 425
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
PNK TF +VL AS S S+ +G+++H +++ GF D + AL + YAK G ++
Sbjct: 426 ----PNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDD 481
Query: 505 SRRVFDRMPDKNE--ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
++ +FD+ E I+WT +V G A+ G A+ ++ LF M++ + PN +T +S L AC
Sbjct: 482 AQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTAC 541
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+H G +++G + + M P + I P +H++C+VD+L R GRL EAE + + D
Sbjct: 542 NHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVIT 600
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LL CK K + ER + + +L E + Y++L+++YA+AGRW +A +RK M +
Sbjct: 601 WMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLD 660
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
KG+R GCS VEV ++H F +PK
Sbjct: 661 KGIRADPGCSAVEVNQELHSFSAGDKSHPK 690
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 37/323 (11%)
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+PN +++A + L L +G +H+ + E++ + NALI +YSKCG D +
Sbjct: 4 RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
FD + VV+WN+MI + NG EA +LF +M +H
Sbjct: 64 AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDM----------------DHD-- 105
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
PN TF SVL C A + SLE + +HG+I+ G + F+ T
Sbjct: 106 ------------GAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRT 153
Query: 491 ALTDTYAKSGDIESSRRVF----DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
AL D+Y K G ++ + VF D P + ++ + M+ ++G+ +ES+ LF M
Sbjct: 154 ALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLE 213
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
P+ +T++SVL ACS + + + + T ++ +RS LS
Sbjct: 214 GTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSR 273
Query: 607 AEDFINSMPFEPDSNAWASLLSG 629
A +++ PD +W ++ +
Sbjct: 274 ARATFDAIQ-SPDVVSWNAMAAA 295
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 188/465 (40%), Gaps = 81/465 (17%)
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
V+PN ++ AC+ + + G + I FE++ + N+LI++ K G + A+
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 240 SVFDRM---EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
FDR+ KRDVV+W ++ F+ G EA ++F +M + G
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDM---------------DHDGA 107
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSAL--ASLKALRSGMHVHAHVLKIGIEKDVFIS 354
P PN+ F VL + A L +L +H ++ GIE++ F+
Sbjct: 108 P---------------PPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVR 152
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
AL+D Y K G D VF + K D P
Sbjct: 153 TALVDSYGKLGSLDDAWEVF---LRKS---------------------------DEEPST 182
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA-------SASVASL 467
+ V+ SA+IS ++ +F M L G P+ T SVL A SA+ L
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVL 242
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E+ ++ + D LGT L TYA+S D+ +R FD + + +SW M
Sbjct: 243 EQAMEV------VSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAY 296
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL--KYFNSMEPIYNIK 585
+ +E++ LFE M + P+ T ++ L AC+ K S+ ++
Sbjct: 297 LQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLE 356
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSM-PFEPDSNAWASLLSG 629
+ ++M ++ G L++A + P D W S+L+
Sbjct: 357 GDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 177/456 (38%), Positives = 259/456 (56%), Gaps = 31/456 (6%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++F ++P+ + W+ I +QS P A L+ QMT S KP+ F +VL A
Sbjct: 60 AVQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTK 119
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA----- 383
L + +G VH V ++G +V + N L+ ++KCG+ K +FD + DV
Sbjct: 120 LFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSAL 179
Query: 384 -----------------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+VSWN MI Y +G+ME A+ LFD P ++ VSW+
Sbjct: 180 IAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWN 239
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A++ GY+ H +F+EM GE P++ T S+L A A + + G+ +H KI++L
Sbjct: 240 AMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMEL 297
Query: 481 G-FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG AL D YAK G+I VF + DK+ +SW ++ GLA G+A+ES+ L
Sbjct: 298 NKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGL 357
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
F EM++T + P+E+T + VL ACSH+G VD+G +YF M+ Y I+PN RH CVVDML+
Sbjct: 358 FREMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLA 417
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R+G L EA DFI SM EP++ W SLL CK + + ++A+RA + L ++ + YVL
Sbjct: 418 RAGLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVL 477
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
LSN+YAS G W A NVRKLM + G+ K+ G S+VE
Sbjct: 478 LSNVYASHGEWDGAENVRKLMDDNGVTKTRGSSFVE 513
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/567 (25%), Positives = 235/567 (41%), Gaps = 132/567 (23%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F + P + W I G Q+ A+ L+ ++ VKP+ TF + KAC ++
Sbjct: 64 FAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWV 123
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G V G +F+ GF +V V N+L+ K G++ +A +FD +K DVV+W+ ++ +
Sbjct: 124 NTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGY 183
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE---------------------- 298
+ GDL AR++FDEMP+R+ VSW+VMI Y + G E
Sbjct: 184 AQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVG 243
Query: 299 ---------EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
EA LF +M P+ +LSA A L G VHA ++++ K
Sbjct: 244 GYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGK 301
Query: 350 -DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
+ NAL+D+Y+KCG G VF I +KD +VSWNS+IGG +G EE+
Sbjct: 302 LSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKD---MVSWNSVIGGLAFHGHAEES---- 354
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
+F EM + P++ TF VL A
Sbjct: 355 ---------------------------LGLFREMQRTKVCPDEITFVGVLAAC------- 380
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV-----M 523
+ +G+++ R F M +K +I + +
Sbjct: 381 ----------------------------SHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCV 412
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
V LA +G KE+ + M+ I PN + S+L AC G V+ + + E +
Sbjct: 413 VDMLARAGLLKEAFDFIASMK---IEPNAIVWRSLLGACKVHGDVELAKR---ATEQLLR 466
Query: 584 IKPN-GRHYTCVVDMLSRSGRLSEAED-----------------FINSMPFEPDSNAWAS 625
++ + Y + ++ + G AE+ F+ + EP+ +
Sbjct: 467 MRVDQSGDYVLLSNVYASHGEWDGAENVRKLMDDNGVTKTRGSSFVEAYRIEPNPVNGRT 526
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEE 652
LL C Y + ++A+R + L +L +
Sbjct: 527 LLGACIVYGDVELAKRVNEELLRLRRD 553
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 191/413 (46%), Gaps = 42/413 (10%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK T V G +HG + + G + LL+ + AN+I D + D
Sbjct: 113 VLKACTKLFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGD 172
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + +I Q G+L A++LFD MP+R+ VSW +I+ + KHG +E + F+ P
Sbjct: 173 VVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPM 232
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW A + G+V + + EAL+LF ++ E G P+EVT S+ ACA++ D G V
Sbjct: 233 KDVVSWNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLGD--XGEKV 290
Query: 207 FGLIFKAGFEKHVSVC-NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
I + K ++ N+L+ + K G + VF + +D+VSW +
Sbjct: 291 HAKIMELNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSV--------- 341
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
I G+ EE+ LFR+M R P+ F VL+A
Sbjct: 342 ----------------------IGGLAFHGHAEESLGLFREMQRTKVCPDEITFVGVLAA 379
Query: 326 LASLKALRSG-MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-A 383
+ + G + + K IE ++ ++D+ ++ G K+ FD I +
Sbjct: 380 CSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEA---FDFIASMKIEP 436
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPK-RNDVSWSAII--SGYLEHKQFD 433
+ + W S++G ++G +E AK + + + R D S ++ + Y H ++D
Sbjct: 437 NAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWD 489
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 121/302 (40%), Gaps = 65/302 (21%)
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SM+G + A ++F +P+ + W+ I G + A++ +M P
Sbjct: 46 SMVGPAATTAVTQYAVQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKP 105
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY------------------------- 484
+ TF VL A + + G +HG++ +LGF
Sbjct: 106 DNFTFPLVLKACTKLFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIF 165
Query: 485 ------DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG------- 531
DV +AL YA+ GD+ +R++FD MP ++ +SW VM+ + G
Sbjct: 166 DDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARR 225
Query: 532 ------------------------YAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+E++ LF+EM + P+E+T+LS+L AC+ G
Sbjct: 226 LFDEAPMKDVVSWNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLG- 284
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
D G K + + K + +VDM ++ G + + + + + D +W S++
Sbjct: 285 -DXGEKVHAKIMELNKGKLSTLLGNALVDMYAKCGNIGKGV-CVFWLIRDKDMVSWNSVI 342
Query: 628 SG 629
G
Sbjct: 343 GG 344
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 184/632 (29%), Positives = 324/632 (51%), Gaps = 71/632 (11%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + + C + +++ G L A L + E + + TALI+ + + +E + F+
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLES---GVKPNEVTFSSICKACAEINDFR 201
+ +++W A I G+ +NG ALK++ ++ G+KP+ +TFSS AC+ + D
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G + +G+ V N+LI + +
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINM-------------------------------YS 209
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L AR++FD + R+ ++W+ MI+ Y + G +A LF++M KPN F
Sbjct: 210 KCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIG 269
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+L+A +L+ L G +H V + G E D+ I N L+++Y+KC +
Sbjct: 270 LLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSS-------------- 315
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+EEA+++F+ + R+ ++W+ +I Y+++ Q +F +
Sbjct: 316 -------------------LEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M L PN+ T S+VL A A + + +GK +H I DV L +L + Y + G
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + VF + DK+ +SW+ ++ A+ G+++ + F E+ + + +++T++S L A
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSH G++ +G++ F SM + + P+ RH+ C+VD+LSR+GRL AE+ I+ MPF PD+
Sbjct: 477 CSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAV 536
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKL-AEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
AW SLLSGCK + + + A R L++L +E+ + LLSN+YA AGRW D VRK
Sbjct: 537 AWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTR 593
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ RK+ GCS++E+ + VH F +P+
Sbjct: 594 NRRAARKNPGCSYIEINDTVHEFVAGDKSHPE 625
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/535 (25%), Positives = 250/535 (46%), Gaps = 85/535 (15%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ K G V +++ F N +SWT + F +NG EAL + +++ G++P+ F
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
C+ D + G + +I + E + + +LIT+ + +++LAR FD M
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
K+ +V+W ++ + GD A +I+ +M ++ PE
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKS----------------PE-------- 157
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
KP+ FS L A + + + G + A + G D + NALI++YSKCG
Sbjct: 158 ----GMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGS 213
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ R VFD + +D V++WN+MI GY G +A ELF M ND
Sbjct: 214 LESARKVFDRLKNRD---VIAWNTMISGYAKQGAATQALELFQRMGP-NDPK-------- 261
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
PN TF +L A ++ LE+G+ +H K+ + G+ D+
Sbjct: 262 ----------------------PNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299
Query: 487 FLGTALTDTYAK-SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
+G L + Y K S +E +R+VF+R+ ++ I+W +++ + G AK+++++F++M+
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV------DMLS 599
++ PNE+T+ +VL AC+ G +G + ++ + +GR VV +M +
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQG-------KAVHALIASGRCKADVVLENSLMNMYN 412
Query: 600 RSGRLSEAEDFINSMPFEPDSN--AWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
R G L +D + D + +W++L++ Y + +++ W+L +E
Sbjct: 413 RCGSL---DDTVGVFAAIRDKSLVSWSTLIAA---YAQHGHSRTGLEHFWELLQE 461
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 128/264 (48%), Gaps = 9/264 (3%)
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
YG G + +A +F + N VSW+ I++ + + + + M+L G P+ + F
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ +S L++G+ LH I++ +D+ LGTAL YA+ D+E +R+ FD M
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTS---ITPNELTILSVLFACSHSGLVDK 570
K ++W ++ G + +G + ++ ++++M S + P+ +T S L+ACS G + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G + + + +++M S+ G L A + + D AW +++SG
Sbjct: 182 G-REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMISG- 238
Query: 631 KTYKNEQIAERAVKNLWKLAEEHP 654
Y + A +A++ ++ P
Sbjct: 239 --YAKQGAATQALELFQRMGPNDP 260
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 178/425 (41%), Gaps = 58/425 (13%)
Query: 21 IETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL-EANEIV 79
+ T + LL T+ + QGRA+H + + G + + LL MY SL EA ++
Sbjct: 264 VVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVF 323
Query: 80 KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISG-------- 127
+ L D++ N +I A +Q+G ++A +F M NE++ + ++S
Sbjct: 324 ERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKR 383
Query: 128 ---------------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
+ + G +++++ F ++++SW+ I +
Sbjct: 384 QGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYA 443
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHV 219
Q+G S L+ F +LL+ G+ ++VT S AC+ + G+ F ++ G
Sbjct: 444 QHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDY 503
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFD---E 275
++ L + G ++ A ++ M D V+WT +L D A R+ D E
Sbjct: 504 RHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
Query: 276 MPERNEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+ +E S +++ Y ++G ++ + + R + + N C I ++
Sbjct: 564 LESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGD 620
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS--MI 392
H ++ I++ +S + D G D R+V ++ E++ ++ ++S +
Sbjct: 621 KSHPEEELIAAEIKR---LSKQMKD----AGYVPDMRMVLHNVKEEEKEQMLCYHSEKLA 673
Query: 393 GGYGL 397
YGL
Sbjct: 674 IAYGL 678
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 278/533 (52%), Gaps = 39/533 (7%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E S+ C IN + V IF+ G E+ C L L + ++D+ +
Sbjct: 39 ESRLVSVLHGCTHINQVK---QVHAHIFRKGLEQ---CCFVLAKLLRTLTKLDVPMDPYP 92
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
R+ +F ++ N W+ +I Y G E+ L
Sbjct: 93 RL--------------------------VFQQVEYPNPFLWTALIRGYALQGPFMESVLL 126
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYS 362
+ M R P + F+ +L A ++ + G VH + IG D+++ N LID+Y
Sbjct: 127 YNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYV 186
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG G VFD ++++DV +SW S+I Y G ME A ELFD +P ++ V+W+A+
Sbjct: 187 KCGCLGCGHRVFDEMLDRDV---ISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAM 243
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
++GY ++ + VF M +G ++ T V+ A A + + + + + GF
Sbjct: 244 VTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGF 303
Query: 483 --PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
+V +G+AL D YAK G +E + +VF+RM ++N S++ M+ G A G A ++ LF
Sbjct: 304 GPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELF 363
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+EM KT I PN +T + VL ACSH+G+V++G + F ME + + P+ HY C+VD+L R
Sbjct: 364 DEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGR 423
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+GRL EA + + MP P W +LL C+ + N +A+ A +L++L Y+LL
Sbjct: 424 AGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILL 483
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ-VHFFFQKTDHNPK 712
SNIYASAGRW D VRKLM KGL+K+ GCSWVE + +H FF +PK
Sbjct: 484 SNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPK 536
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 38/377 (10%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F++ + N WTA I G+ G E++ L+ + G+ P TF+++ KAC+ D
Sbjct: 96 FQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDV 155
Query: 201 RLGLSVFG-LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
LG V I GF + V N+LI + +K G + VFD M RDV+SWT ++
Sbjct: 156 NLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVA 215
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ ++G++ A +FD +P ++ V+W+ M+ Y Q+ P EA +F +M K +
Sbjct: 216 YAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTL 275
Query: 320 SIVLSALASLKALRSGMHVH--AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
V+SA A L A + V A G +V + +ALID+Y+KCG +D VF+ +
Sbjct: 276 VGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERM 335
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
E++ V S++SMI G+ ++G A ELFD
Sbjct: 336 EERN---VYSYSSMIVGFAMHGLAGAAMELFD---------------------------- 364
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTY 496
EML + PN+ TF VL A + +E+G+ L + + G + D
Sbjct: 365 ---EMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLL 421
Query: 497 AKSGDIESSRRVFDRMP 513
++G +E + + MP
Sbjct: 422 GRAGRLEEALNLVKMMP 438
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 143/262 (54%), Gaps = 7/262 (2%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G DL V N +I+ ++ G L R+FD M +R+ +SWT+LI + K G +E + F+
Sbjct: 172 GSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDG 231
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +++++WTA + G+ QN EAL++F ++ +GVK +EVT + ACA++ +
Sbjct: 232 LPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYA 291
Query: 204 LSVFGLIFKAGF--EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
V + ++GF +V V ++LI + K G V+ A VF+RME+R+V S++ ++ F
Sbjct: 292 NWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFA 351
Query: 262 EMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNT 316
G G A +FDEM + N V++ ++ + +G E+ +LF M + P+
Sbjct: 352 MHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSE 411
Query: 317 SCFSIVLSALASLKALRSGMHV 338
++ ++ L L +++
Sbjct: 412 DHYACMVDLLGRAGRLEEALNL 433
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 312/632 (49%), Gaps = 61/632 (9%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + C A+ G + G+ VS TAL+ ++K + ++ F
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVS-TALLDMYVKCACLPDAAHIFATM 186
Query: 145 PFQNVISWTAAICGFVQNGFSFEALK--LFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
P +++++W A + G+ +G A+ L +++ ++PN T ++ A+
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G SV +A + + S +T + +G T +LD++ +
Sbjct: 247 GTSVHAYCIRACLHPNRNS-KSKLTDGVLLG--------------------TALLDMYAK 285
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFS 320
G L ARR+FD MP RNEV+WS +I + +AF LF+ M F TS S
Sbjct: 286 CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 345
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
L A ASL LR G +HA + K G+ D+ N+L+ +Y+K
Sbjct: 346 -ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA---------------- 388
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
G +++A LFD M ++ VS+SA++SGY+++ + + F VF
Sbjct: 389 ------------------GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+M P+ +T S++ A + +A+L+ G+ HG +I G + + AL D YAK G
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
I+ SR+VF+ MP ++ +SW M+ G G KE+ LF EM P+ +T + +L
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSHSGLV +G +F+ M Y + P HY C+VD+LSR G L EA +FI SMP D
Sbjct: 551 ACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 610
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL C+ YKN + ++ + + +L E +VLLSNIY++AGR+ +A VR +
Sbjct: 611 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 670
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G +KS GCSW+E+ +H F +P+
Sbjct: 671 KVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 181/390 (46%), Gaps = 85/390 (21%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
T + LL + Q + QG ++H + I+ +H R N K
Sbjct: 229 STLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR-------------------NSKSKL 269
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+G +++ +++ + G+L A+R+FD MP RNEV+W+ALI GF+ R+ ++ F
Sbjct: 270 TDG--VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLF 327
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ + G F + P + +S +ACA ++ R
Sbjct: 328 K---------------AMLAQGLCF-------------LSPTSI--ASALRACASLDHLR 357
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + L+ K+G ++ NSL+++ K G +D A ++FD M +D VS++ ++ ++
Sbjct: 358 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 417
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
Q+G EEAF +F++M + +P+ +
Sbjct: 418 -------------------------------QNGRAEEAFLVFKKMQACNVEPDAATMVS 446
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
++ A + L AL+ G H V+ G+ + I NALID+Y+KCG R VF+ + +D
Sbjct: 447 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 506
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+VSWN+MI GYG++G +EA LF M
Sbjct: 507 ---IVSWNTMIAGYGIHGLGKEATALFLEM 533
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 173/421 (41%), Gaps = 88/421 (20%)
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA--FRLFRQMTRYSFKPNTSC 318
I G L A +FD++P + +++ +I Y+ S A L+R+M R+ PN
Sbjct: 68 IASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYT 127
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
F L A ++L G +H H + G++ D+F+S AL+D+Y KC D +F ++
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+D +V+WN+M+ GY +G A +M
Sbjct: 188 ARD---LVAWNAMLAGYAHHGMYHHAVAHLLSM--------------------------- 217
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD----------VFL 488
+M + PN ST ++L A +L +G +H I+ + V L
Sbjct: 218 --QMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLL 275
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GTAL D YAK G + +RRVFD MP +NE++W+ ++ G ++ LF+ M +
Sbjct: 276 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 335
Query: 549 T-PNELTILSVLFAC-----------------------------------SHSGLVDKGL 572
+ +I S L AC + +GL+D+ +
Sbjct: 336 CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 395
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FEPDSNAWASLLSG 629
F+ M + Y+ +V ++GR EA M EPD+ SL+
Sbjct: 396 ALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 450
Query: 630 C 630
C
Sbjct: 451 C 451
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 267/481 (55%), Gaps = 31/481 (6%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+ + + G + A ++F ++ + + W+ MI Q+ P A L+ QM +P
Sbjct: 52 IFVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRP 111
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ FS VL A L ++ G +H VLK G + + F+ N LI ++ CG+ R +F
Sbjct: 112 DKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALF 171
Query: 375 DSIVEKDVA----------------------------HVVSWNSMIGGYGLNGQMEEAKE 406
D+ +++V +VSWN MI Y +G+ME+A++
Sbjct: 172 DASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARK 231
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
LFD +PK++ V+W+A+I+GY+ + +F+ M G+ P+ T S+L ASA +
Sbjct: 232 LFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGD 291
Query: 467 LEKGKDLHGKIIKLGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
LE GK +H I + V L AL D YAK G I ++ VF M K+ SW ++
Sbjct: 292 LEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIG 351
Query: 526 GLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
GLA G+A+ESINLF+EM + + PNE+T ++VL ACSH+G V +G YFN M+ ++ I+
Sbjct: 352 GLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIE 411
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
PN +HY C+VD+L R+G L EA DFI++M EP++ W +LL C+ + + ++ RA +
Sbjct: 412 PNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQ 471
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ--VHFF 703
L K+ ++ YVLLSNIYAS G W VRKLM + G++K G S ++ N +HF
Sbjct: 472 LLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFL 531
Query: 704 F 704
F
Sbjct: 532 F 532
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 209/480 (43%), Gaps = 99/480 (20%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+S + G ++ + F + ++ W I G Q A+ L+ ++ GV+P+
Sbjct: 53 FVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPD 112
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ TFS + KAC +++ +LG + G + K+GF+ + V N+LI G++ AR++FD
Sbjct: 113 KFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFD 172
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
KR+VV W+ + + G L AR++FDEMP ++ VSW+VMI Y + G E+A +L
Sbjct: 173 ASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKL 232
Query: 304 FRQMTRYSF-------------------------------KPNTSCFSIVLSALASLKAL 332
F ++ + +P+ +LSA A L L
Sbjct: 233 FDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDL 292
Query: 333 RSGMHVHAHVLKIGI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
G +H + + + V +SNALID+Y+KCG + VF + +KD + SWNS+
Sbjct: 293 EIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTS---SWNSI 349
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
IGG L+G EE+ L F EML PN+
Sbjct: 350 IGGLALHGHAEESINL-------------------------------FQEMLRLKMKPNE 378
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF +VL A + + +G+ ++ ++K VF
Sbjct: 379 ITFVAVLVACSHAGKVREGR-MYFNLMK---------------------------NVFKI 410
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
P N + MV L +G E+ + + ME I PN + ++L AC G V+ G
Sbjct: 411 EP--NIKHYGCMVDILGRAGLLIEAFDFIDTME---IEPNAIIWRTLLGACRVHGDVELG 465
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 185/402 (46%), Gaps = 40/402 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK T + V G +HG ++K+G ++ L+ + A + +
Sbjct: 119 VLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKRE 178
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + + + G L+ A++LFD MP ++ VSW +I+ + KHG +E++ F+ P
Sbjct: 179 VVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPK 238
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V++W A I G+V + + EAL++F + + G +P++VT SI A A++ D +G +
Sbjct: 239 KDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKI 298
Query: 207 FGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
IF + V + N+LI + K G + A VF M K+D SW I
Sbjct: 299 HRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSI--------- 349
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
I G+ EE+ LF++M R KPN F VL A
Sbjct: 350 ----------------------IGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVA 387
Query: 326 LASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV- 382
+ +R G ++ +++K IE ++ ++D+ + G + FD I ++
Sbjct: 388 CSHAGKVREG-RMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEA---FDFIDTMEIE 443
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPK-RNDVSWSAII 423
+ + W +++G ++G +E + + + K R D S ++
Sbjct: 444 PNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVL 485
>gi|297830544|ref|XP_002883154.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp.
lyrata]
gi|297328994|gb|EFH59413.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp.
lyrata]
Length = 614
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 331/593 (55%), Gaps = 19/593 (3%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-NPFQNV 149
N ++N + G L EA+ +FD MPERN SW A+I+ ++K V+E+ F+R N +++
Sbjct: 27 NQLVNLYSKNGLLREARNVFDEMPERNVYSWNAVIAAYVKFNNVKEARELFKRDNCERDL 86
Query: 150 ISWTAAICGFVQ-NGFSFEALKLFLKLL---ESGVKPNEVTFSSICKACAEINDFRLGLS 205
I++ + GF + +G EA+K+F ++ + + ++ + +++ K A++ + G
Sbjct: 87 ITYNTLLSGFAKTDGCESEAIKMFGEMHRKEKDEIWIDDFSVTTMVKLSAKLTNVFYGEQ 146
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR--MEKRDVVSWTVILDVFIEM 263
+ G++ K G + +SLI + K G+ +VF+ +E D V+ ++ +
Sbjct: 147 LHGVMVKTGNDATKFSVSSLIHMYSKCGKFKEVCNVFNGSCVEFVDSVARNAMIAAYCRE 206
Query: 264 GDLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
GD+ +A IF PE N+ +SW+ +I+ Y Q+GY EEA ++ M K + F+ V
Sbjct: 207 GDIDKALSIFWRNPELNDTISWNTLISGYAQNGYEEEALKIAVSMEESGLKWDEHTFAAV 266
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK---DGRLVFDSIVE 379
L+ L+SLK+L+ G VHA +LK G + F+S+ ++D+Y KCG K L++
Sbjct: 267 LNVLSSLKSLKIGKEVHARLLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG---- 322
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
++ S +SMI GY G+M EAK LFD++ ++N V W+A+ GYL +Q D V +
Sbjct: 323 --FGNLYSTSSMIVGYSSQGKMGEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELA 380
Query: 440 NEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ + + +P+ SVL A + A +E GK++HG ++ G D L TA D Y+K
Sbjct: 381 RDFIANETNVPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G++E + R+FD +++ + + M+ G A G+ +S LFE+M + P+E+T +++
Sbjct: 441 CGNVEYAERIFDISFERDTVMYNTMIAGYAHHGHEAKSFQLFEDMTEGGFKPDEITFMAL 500
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM-PFE 617
L AC H GLV G KYF SM YNI P HYTC++D+ ++ RL +A + + + E
Sbjct: 501 LSACRHRGLVLAGEKYFKSMIEAYNISPEAGHYTCMIDLYGKANRLDKAIELMEGIDQVE 560
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
D+ + L+ C KN ++ + + L + + + Y+ L+N YAS+GRW
Sbjct: 561 KDAVILGAFLNACSWNKNTELVKEVEEKLLAIEGSNGSRYIQLANAYASSGRW 613
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 187/400 (46%), Gaps = 48/400 (12%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG-----FDLVVHN 91
V G LHG ++KTG ++ + L+ MY K + E+ NG D V N
Sbjct: 141 VFYGEQLHGVMVKTGNDATKFSVSSLIHMY---SKCGKFKEVCNVFNGSCVEFVDSVARN 197
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNE-VSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
MI A + G++++A +F PE N+ +SW LISG
Sbjct: 198 AMIAAYCREGDIDKALSIFWRNPELNDTISWNTLISG----------------------- 234
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+ QNG+ EALK+ + + ESG+K +E TF+++ + + ++G V +
Sbjct: 235 --------YAQNGYEEEALKIAVSMEESGLKWDEHTFAAVLNVLSSLKSLKIGKEVHARL 286
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K G + V + ++ + K G + A S ++ S + ++ + G +GEA+
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSTSSMIVGYSSQGKMGEAK 346
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ-MTRYSFKPNTSCFSIVLSALASL 329
R+FD + E+N V W+ M Y P+ L R + + P++ VL A +
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARDFIANETNVPDSLVMVSVLGACSLQ 406
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ G +H H L+ GI D + A +D+YSKCG + +FD E+D V +N
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDISFERD---TVMYN 463
Query: 390 SMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISG 425
+MI GY +G ++ +LF++M K +++++ A++S
Sbjct: 464 TMIAGYAHHGHEAKSFQLFEDMTEGGFKPDEITFMALLSA 503
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 211/457 (46%), Gaps = 74/457 (16%)
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF----- 304
+S +++++ + G L EAR +FDEMPERN SW+ +IA Y + +EA LF
Sbjct: 23 TISSNQLVNLYSKNGLLREARNVFDEMPERNVYSWNAVIAAYVKFNNVKEARELFKRDNC 82
Query: 305 -RQMTRYS-----FKPNTSC-----------------------FSI--VLSALASLKALR 333
R + Y+ F C FS+ ++ A L +
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIKMFGEMHRKEKDEIWIDDFSVTTMVKLSAKLTNVF 142
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD-SIVEKDVAHVVSWNSMI 392
G +H ++K G + F ++LI +YSKCG+ K+ VF+ S VE V+ N+MI
Sbjct: 143 YGEQLHGVMVKTGNDATKFSVSSLIHMYSKCGKFKEVCNVFNGSCVE--FVDSVARNAMI 200
Query: 393 GGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
Y G +++A +F P+ ND +SW+ +ISGY ++ + + M SG ++
Sbjct: 201 AAYCREGDIDKALSIFWRNPELNDTISWNTLISGYAQNGYEEEALKIAVSMEESGLKWDE 260
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE-------- 503
TF++VL +S+ SL+ GK++H +++K G + F+ + + D Y K G+++
Sbjct: 261 HTFAAVLNVLSSLKSLKIGKEVHARLLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLL 320
Query: 504 -----------------------SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
++R+FD + +KN + WT M G + L
Sbjct: 321 YGFGNLYSTSSMIVGYSSQGKMGEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELA 380
Query: 541 EE-MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
+ + + P+ L ++SVL ACS ++ G K + I + + T VDM S
Sbjct: 381 RDFIANETNVPDSLVMVSVLGACSLQAYMEPG-KEIHGHSLRTGILMDKKLVTAFVDMYS 439
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
+ G + AE + + FE D+ + ++++G + +E
Sbjct: 440 KCGNVEYAERIFD-ISFERDTVMYNTMIAGYAHHGHE 475
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 135/271 (49%), Gaps = 44/271 (16%)
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+K L+ G H +K G SN L++LYSK G ++ R VFD + E++ V SW
Sbjct: 1 MKCLKDGFLHHIRSIKTGSTLTTISSNQLVNLYSKNGLLREARNVFDEMPERN---VYSW 57
Query: 389 NSMIGGYGLNGQMEEAKELF--DNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLL- 444
N++I Y ++EA+ELF DN +R+ ++++ ++SG+ + + +F EM
Sbjct: 58 NAVIAAYVKFNNVKEARELFKRDNC-ERDLITYNTLLSGFAKTDGCESEAIKMFGEMHRK 116
Query: 445 -SGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY------------------ 484
EI + + ++++ SA + ++ G+ LHG ++K G
Sbjct: 117 EKDEIWIDDFSVTTMVKLSAKLTNVFYGEQLHGVMVKTGNDATKFSVSSLIHMYSKCGKF 176
Query: 485 ----DVFLGT-----------ALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMVRGLA 528
+VF G+ A+ Y + GDI+ + +F R P+ N+ ISW ++ G A
Sbjct: 177 KEVCNVFNGSCVEFVDSVARNAMIAAYCREGDIDKALSIFWRNPELNDTISWNTLISGYA 236
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVL 559
++GY +E++ + ME++ + +E T +VL
Sbjct: 237 QNGYEEEALKIAVSMEESGLKWDEHTFAAVL 267
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 62/155 (40%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HGH ++TGI ++ L T + MY +
Sbjct: 412 GKEIHGHSLRTGILMDKKLVTAFVDMY-------------------------------SK 440
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+E A+R+FD ER+ V + +I+G+ HG E FQ
Sbjct: 441 CGNVEYAERIFDISFERDTVMYNTMIAGYAHHGH--------EAKSFQ------------ 480
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
LF + E G KP+E+TF ++ AC
Sbjct: 481 -----------LFEDMTEGGFKPDEITFMALLSAC 504
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 193/674 (28%), Positives = 324/674 (48%), Gaps = 102/674 (15%)
Query: 106 AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
A+ +FDGM R +SW A ++ + GRV
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHARRGRVR------------------------------ 94
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
+AL ++ S +E T++S ACA R+G V + K+G + V SL
Sbjct: 95 -DALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASL 153
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP-ERNEVSW 284
+ ++D AR++FD + + + W+ ++ + L +A + MP R+ +W
Sbjct: 154 LDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAW 213
Query: 285 SVMIARYNQSG--YPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
+ +I+ Y + Y ++ LF Q+ PN + VL A + AL G +H
Sbjct: 214 TAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGC 273
Query: 342 VLKIGIEKDVFISNALIDLYSKCG-------------------------------ETKDG 370
+++ G E + I++AL+DLY + G T+D
Sbjct: 274 LIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDA 333
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN--------------- 415
+LVF + E D S+N MI Y G++E+ + +F+ MP+RN
Sbjct: 334 KLVFSQMTEHDSG---SYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNG 390
Query: 416 -----------------DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
V+W+++ISGY+++ Q +F M + STF ++L
Sbjct: 391 KLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALL 450
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A++ ++E+GK +H + K F + ++GTAL D Y+K G + +R F + N
Sbjct: 451 HACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVA 510
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SWT ++ GLA++G+ E+I F M K ++ PNE+T L +L A + +GLV+KG+++F+SM
Sbjct: 511 SWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSM 570
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
E Y + P HYTC VD+L R+ R+ EAE FI+ MP D W +LL+ C + ++
Sbjct: 571 ES-YGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEM 629
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E+ + L+ + +H + YV +SNIYA G+W D + VR + +K GCSW+EV++
Sbjct: 630 GEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKD 689
Query: 699 QVHFFFQKTDHNPK 712
VH F + ++P+
Sbjct: 690 MVHVFLVEDRNHPE 703
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 220/482 (45%), Gaps = 77/482 (15%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGFV 160
+L+ A+ LFD + NE+ W+ ++ ++ + +++ +R P +++ +WTA I G+
Sbjct: 162 DLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYA 221
Query: 161 Q--NGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+ N + ++L+LF++LL E GV PNE T+ S+ +AC ++ G S+ G + ++GFE
Sbjct: 222 RGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFES 281
Query: 218 HVSVCNSLITLSLKMGEVD-------------------------------LARSVFDRME 246
+ ++L+ L + G VD A+ VF +M
Sbjct: 282 EQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMT 341
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMP----------------------------- 277
+ D S+ +++ + + G L + RR+F+ MP
Sbjct: 342 EHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQ 401
Query: 278 ---ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
ERN V+W+ MI+ Y Q+ EA +LF M R S + + S F +L A A++ +
Sbjct: 402 IKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQ 461
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VHA + K E + ++ AL+D+YSKCG D R F I+ +VA SW S+I G
Sbjct: 462 GKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVA---SWTSLING 518
Query: 395 YGLNGQMEEA----KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
NG EA + N K N++++ I+ + F+ M G +P
Sbjct: 519 LAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPT 578
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
++ CA + + ++ I K+ P D + AL + D+E +V +
Sbjct: 579 VEHYT---CAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAE 635
Query: 511 RM 512
++
Sbjct: 636 KL 637
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 181/403 (44%), Gaps = 45/403 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSR----------------------------- 70
GR++HG LI++G E+ +T+ L+ +Y S
Sbjct: 267 GRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFIS 326
Query: 71 --KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
++ +A + + D +N MI A G LE+ +R+F+ MP RN V+ +++S
Sbjct: 327 MGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVL 386
Query: 129 MKHGRVEESMWYFER-NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+++G++EE FE+ +N ++W + I G+VQN S EALKLF + ++ + TF
Sbjct: 387 LQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTF 446
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
++ ACA I G V L+ K FE + V +L+ + K G V AR+ F +
Sbjct: 447 PALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMS 506
Query: 248 RDVVSWTVILDVFIEMGDLGEA----RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+V SWT +++ + G EA R+ + NE+++ ++ ++G + R
Sbjct: 507 PNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRF 566
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F M Y P ++ + L + +R + K+ I D + AL+ +
Sbjct: 567 FHSMESYGVVPTVEHYTCAVDLLGRARRVREA---EKFISKMPIPADGVVWGALL---TA 620
Query: 364 CGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
C T D G V + + H+ ++ +M Y G+ E+
Sbjct: 621 CWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWED 663
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 107/315 (33%), Gaps = 66/315 (20%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF++ S T LL + + QG+ +H L KT Y+ T L+ MY
Sbjct: 430 LFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMY- 488
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
C G + +A+ F + N SWT+LI+G
Sbjct: 489 ----------------------SKC--------GCVSDARAAFSCIMSPNVASWTSLING 518
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
QNG EA+ F ++L++ VKPNE+TF
Sbjct: 519 -------------------------------LAQNGHWMEAIVQFARMLKNNVKPNEITF 547
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME- 246
I A A G+ F + G V + L + V A +M
Sbjct: 548 LGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPI 607
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDE---MPERNEVSWSVMIARYNQSGYPEEAFRL 303
D V W +L DL ++ ++ M ++ ++ M Y + G E+ ++
Sbjct: 608 PADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKV 667
Query: 304 FRQMTRYSFKPNTSC 318
++ + K C
Sbjct: 668 RTRLRSINAKKEPGC 682
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 312/632 (49%), Gaps = 61/632 (9%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + C A+ G + G+ VS TAL+ ++K + ++ F
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVS-TALLDMYVKCACLPDAAHIFATM 186
Query: 145 PFQNVISWTAAICGFVQNGFSFEALK--LFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
P +++++W A + G+ +G A+ L +++ ++PN T ++ A+
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G SV +A + + S +T + +G T +LD++ +
Sbjct: 247 GTSVHAYRIRACLHSNRNS-KSKLTDGVLLG--------------------TALLDMYAK 285
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFS 320
G L ARR+FD MP RNEV+WS +I + +AF LF+ M F TS S
Sbjct: 286 CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 345
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
L A ASL LR G +HA + K G+ D+ N+L+ +Y+K
Sbjct: 346 -ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA---------------- 388
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
G +++A LFD M ++ VS+SA++SGY+++ + + F VF
Sbjct: 389 ------------------GLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
+M P+ +T S++ A + +A+L+ G+ HG +I G + + AL D YAK G
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
I+ SR+VF+ MP ++ +SW M+ G G KE+ LF EM P+ +T + +L
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSHSGLV +G +F+ M Y + P HY C+VD+LSR G L EA +FI SMP D
Sbjct: 551 ACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV 610
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL C+ YKN + ++ + + +L E +VLLSNIY++AGR+ +A VR +
Sbjct: 611 RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQ 670
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+G +KS GCSW+E+ +H F +P+
Sbjct: 671 KVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 181/390 (46%), Gaps = 85/390 (21%)
Query: 22 ETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
T + LL + Q + QG ++H + I+ +H R N K
Sbjct: 229 STLVALLPLLAQQGALAQGTSVHAYRIRACLHSNR-------------------NSKSKL 269
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
+G +++ +++ + G+L A+R+FD MP RNEV+W+ALI GF+ R+ ++ F
Sbjct: 270 TDG--VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLF 327
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
+ + G F + P + +S +ACA ++ R
Sbjct: 328 K---------------AMLAQGLCF-------------LSPTSI--ASALRACASLDHLR 357
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
+G + L+ K+G ++ NSL+++ K G +D A ++FD M +D VS++ ++ ++
Sbjct: 358 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 417
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
Q+G EEAF +F++M + +P+ +
Sbjct: 418 -------------------------------QNGRAEEAFLVFKKMQACNVEPDAATMVS 446
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
++ A + L AL+ G H V+ G+ + I NALID+Y+KCG R VF+ + +D
Sbjct: 447 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 506
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+VSWN+MI GYG++G +EA LF M
Sbjct: 507 ---IVSWNTMIAGYGIHGLGKEATALFLEM 533
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 173/421 (41%), Gaps = 88/421 (20%)
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA--FRLFRQMTRYSFKPNTSC 318
I G L A +FD++P + +++ +I Y+ S A L+R+M R+ PN
Sbjct: 68 IASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYT 127
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
F L A ++L G +H H + G++ D+F+S AL+D+Y KC D +F ++
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+D +V+WN+M+ GY +G A +M
Sbjct: 188 ARD---LVAWNAMLAGYAHHGMYHHAVAHLLSM--------------------------- 217
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD----------VFL 488
+M + PN ST ++L A +L +G +H I+ + V L
Sbjct: 218 --QMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLL 275
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GTAL D YAK G + +RRVFD MP +NE++W+ ++ G ++ LF+ M +
Sbjct: 276 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 335
Query: 549 T-PNELTILSVLFAC-----------------------------------SHSGLVDKGL 572
+ +I S L AC + +GL+D+ +
Sbjct: 336 CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 395
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP---FEPDSNAWASLLSG 629
F+ M + Y+ +V ++GR EA M EPD+ SL+
Sbjct: 396 ALFDEMAVKDTVS-----YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPA 450
Query: 630 C 630
C
Sbjct: 451 C 451
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 286/542 (52%), Gaps = 35/542 (6%)
Query: 156 ICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I G Q+ EA+ ++ L+ G+ + +TF + KAC+ + D G + K G
Sbjct: 128 IRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLG 187
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
F ++ + NSLI + + G+LG A+++FD
Sbjct: 188 FGSYLFIENSLIRM-------------------------------YGYFGELGYAQKVFD 216
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
+M +R+ VSW+ +I Y+Q +E LF M + ++ V+ A + L
Sbjct: 217 KMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGV 276
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+ ++ ++ DV++ N+LID+Y + G R VFD + EK++ VSWN+M+ G
Sbjct: 277 VDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNI---VSWNAMLTG 333
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y G + AK+LF+ MP RN +SW+ +ISG + Q +F EM+ + P++ T
Sbjct: 334 YATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITV 393
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
SSVL A + + L+ G+ +H + + DV++G AL D Y K G ++ + VF M
Sbjct: 394 SSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKK 453
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
K+ +SWT M+ GLA +G+ LF +M + + P + + +L AC+H+GLVDKGL+Y
Sbjct: 454 KDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEY 513
Query: 575 FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK 634
F SME +Y ++P +HY CVVD+LSRSG L A +FI MP PD W LLS CK ++
Sbjct: 514 FESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHR 573
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N +AE A L +L + YVLLSN YA + RW DA +R LM ++K S +
Sbjct: 574 NLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQKPSSWSSI 633
Query: 695 EV 696
EV
Sbjct: 634 EV 635
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 204/431 (47%), Gaps = 66/431 (15%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
G L + N +I +G L AQ++FD M +R+ VSW +LI G+ + R +
Sbjct: 189 GSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFK-------- 240
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
E L LF + E+ V + VT + AC+ + + +
Sbjct: 241 -----------------------EVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVV 277
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
S+ I + V + NSLI + + G VDLAR VFDRM+++++VSW +L +
Sbjct: 278 DSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATA 337
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
GDL A+++F+EMP RN +SW+ MI+ Q+ +A +LF++M + KP+ S VL
Sbjct: 338 GDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVL 397
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA + L L +G VH ++ + I+ DV++ NALID+Y KCG VF + +KD
Sbjct: 398 SACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKD-- 455
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSW SMI G +NG DN VF +F++ML
Sbjct: 456 -SVSWTSMILGLAVNG-------FVDN------------------------VFELFSQML 483
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDI 502
G P +F +L A ++KG + + + G ++ + D ++SG++
Sbjct: 484 RDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGEL 543
Query: 503 ESSRRVFDRMP 513
+ + +MP
Sbjct: 544 DRAYEFIKQMP 554
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 312/621 (50%), Gaps = 100/621 (16%)
Query: 82 LNGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
++GFD V N ++ + G +E A+R+FD M ER
Sbjct: 151 MSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERT---------------------- 188
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
++SW I G+ +NG EAL +F ++ G++P+ T S+ C+ + +
Sbjct: 189 ---------LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
+G V L V V N +GE D+ W +LD+
Sbjct: 240 LEVGRRVHAL---------VEVKN--------LGE--------------DISVWNSLLDM 268
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + G++ EA+ IF EM +R+ VSW+ M+ Y +G A L + M S KPN
Sbjct: 269 YAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTL 328
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ VLSA ASL +L+ G +H ++ +E +V + ALID+Y+KC L F
Sbjct: 329 ASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVN---LSF----- 380
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+F K+ W+AIISG + + +F
Sbjct: 381 --------------------------RVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELF 414
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+ML+ PN +T +S+L A A + L++ +++HG +I+ GF + + T L D Y+K
Sbjct: 415 KQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKC 474
Query: 500 GDIESSRRVFDRMP--DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
G +ES+ +F+ +P DK+ I+W+ ++ G G+ + +I+LF++M ++ + PNE+T S
Sbjct: 475 GSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTS 534
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
+L ACSH+GLVD+GL F M + HYTCV+D+L R+GRL EA + I +M F
Sbjct: 535 ILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFR 594
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
P+ W +LL C ++N ++ E A K L++L + YVLL+NIY++ GRW DA +VR
Sbjct: 595 PNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVR 654
Query: 678 KLMTEKGLRKSGGCSWVEVRN 698
+M GLRK+ S +EVRN
Sbjct: 655 LMMNNIGLRKTPAHSLIEVRN 675
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 217/528 (41%), Gaps = 108/528 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +H + +G + ++ L+ MY+ + A + + LV N MIN +
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201
Query: 100 WGNLEEAQRLFDGM------PERNEV---------------------------------S 120
G ++EA +FD M P+ V
Sbjct: 202 NGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISV 261
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W +L+ + K G ++E+ F ++V+SWT + G++ NG + AL L + V
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESV 321
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KPN VT +S+ ACA + + G + G + E V V +LI + K V+L+
Sbjct: 322 KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFR 381
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VF + K+ W I+ I +G +A
Sbjct: 382 VFSKTSKQRTAPWNAIISGCI-------------------------------HNGLSRKA 410
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF+QM + PN + + +L A A L L+ ++H ++++ G + ++ LID+
Sbjct: 411 IELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDI 470
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG + +F+ I +KD +++W+++I GYG++G E A LFD
Sbjct: 471 YSKCGSLESAHNIFNGIPKKD-KDIITWSAIIAGYGMHGHGETAISLFD----------- 518
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-- 478
+M+ SG PN+ TF+S+L A + +++G L ++
Sbjct: 519 --------------------QMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLED 558
Query: 479 -KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMV 524
++ D + T + D ++G +E + + M + N W ++
Sbjct: 559 NQMSLRTDHY--TCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALL 604
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 198/485 (40%), Gaps = 129/485 (26%)
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR +FD + + SW + MI Y SG
Sbjct: 75 ARKLFDELRNPSLFSW-------------------------------NAMIRMYTNSGLS 103
Query: 298 EEAFRLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+A LF QM + P+ + V+ A G +HA + G + D F+ N+
Sbjct: 104 YDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNS 163
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN- 415
L+ +Y CGE + R VFD + E+ +VSWN+MI GY NG ++EA +FD M +
Sbjct: 164 LMAMYMNCGEMEVARRVFDLMRERT---LVSWNTMINGYFKNGCVKEALMVFDWMIGKGI 220
Query: 416 -------------------------------------DVS-WSAIISGYLEHKQFDLVFA 437
D+S W++++ Y + D
Sbjct: 221 EPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQM 280
Query: 438 VFNEM----------LLSGEI---------------------PNKSTFSSVLCASASVAS 466
+F EM +++G I PN T +SVL A AS+ S
Sbjct: 281 IFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYS 340
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
L+ G+ LHG I+ +V + TAL D YAK ++ S RVF + + W ++ G
Sbjct: 341 LKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISG 400
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGLVDKGLKYF 575
+G ++++I LF++M ++ PN+ T+ S+L A + H L+ G +
Sbjct: 401 CIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSG--FL 458
Query: 576 NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP-FEPDSNAWASLLSGCKTYK 634
+ +E T ++D+ S+ G L A + N +P + D W+++++G +
Sbjct: 459 SRIEVA----------TILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHG 508
Query: 635 NEQIA 639
+ + A
Sbjct: 509 HGETA 513
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 148/315 (46%), Gaps = 34/315 (10%)
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
T+ + +L S K++ + +HAH + +G+ L YS
Sbjct: 18 TARYQSLLQRCTSRKSIPNTKQIHAHTITLGL---------LSSPYSH------------ 56
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
H++S S+ Y + G A++LFD + + SW+A+I Y
Sbjct: 57 --------HLLS--SLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDA 106
Query: 436 FAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F +ML SG P+ T+ V+ A E G +H + + GF D F+ +L
Sbjct: 107 LGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMA 166
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y G++E +RRVFD M ++ +SW M+ G ++G KE++ +F+ M I P+ T
Sbjct: 167 MYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCAT 226
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
++SVL CS+ ++ G + +++ + N+ + + ++DM ++ G + EA+ M
Sbjct: 227 VVSVLPVCSYLKELEVG-RRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEM 285
Query: 615 PFEPDSNAWASLLSG 629
+ D +W ++++G
Sbjct: 286 D-KRDVVSWTTMMNG 299
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 294/597 (49%), Gaps = 82/597 (13%)
Query: 110 FDGMPERNEV-SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
++G N V SW L M H R F+ P V W A G+ N F E
Sbjct: 55 YNGYVAPNVVTSWVGLKQ--MAHAR-----HLFDHFPDPKVELWNAISRGYFHNAFYREV 107
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
+ LF K+ V+PN TF + K+CA+I F G + + K G E + V +LI
Sbjct: 108 VFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLI-- 165
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
DV+ +G A ++F M ERN V+W+ MI
Sbjct: 166 -----------------------------DVYSGGRAIGSAYKLFVGMLERNIVAWTSMI 196
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
+ Y A RLF + E
Sbjct: 197 SGYILCNRVALARRLF---------------------------------------DLAPE 217
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
+DV + N ++ Y + G+ K R +FD++ +D +SWN+M+ GY NG +E ++LF
Sbjct: 218 RDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDT---MSWNTMLNGYANNGDVEACEQLF 274
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASL 467
+ MP+RN SW+ +I GY + F V F ML+ G +PN +T +VL A A + +L
Sbjct: 275 EEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGAL 334
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+ GK +H +GF +++G AL D Y+K G IE++ VF+ M K+ I+W M+ GL
Sbjct: 335 DLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGL 394
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A G +++ LF +M+ P+ +T + VL +C+H GLV++G YFNSM Y+I P
Sbjct: 395 ATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQ 454
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C+VD+ R+G L A +F+ MP E D+ WA+LL C+ YKN +AE A++ L
Sbjct: 455 IEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLI 514
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L ++PA YVLLSNIY GRW D ++ LM + G +K GCS +EV + V F+
Sbjct: 515 VLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFY 571
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 202/498 (40%), Gaps = 133/498 (26%)
Query: 95 NANIQWGNLEE---AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
N W L++ A+ LFD P+ W A+ G+
Sbjct: 62 NVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYF---------------------- 99
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
N F E + LF K+ V+PN TF + K+CA+I F G + +
Sbjct: 100 ---------HNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVI 150
Query: 212 KAG-------------------------------FEKHVSVCNSLITLSLKMGEVDLARS 240
K G E+++ S+I+ + V LAR
Sbjct: 151 KGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARR 210
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+FD +RDVV W +++ +IE+GD+ AR++FD MP R+ +SW+ M+ Y +G E
Sbjct: 211 LFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEAC 270
Query: 301 FRLFRQMTRYS-----------------------FK---------PNTSCFSIVLSALAS 328
+LF +M + FK PN + VLSA A
Sbjct: 271 EQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACAR 330
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L AL G VH + IG + +++ NALID+YSKCG ++ VF+S+ D+ +++W
Sbjct: 331 LGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM---DLKDLITW 387
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
NSMI G +G +A +F++M ++GE
Sbjct: 388 NSMICGLATHGCGADA-------------------------------LTLFHQMKINGEK 416
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ TF VLC+ + +E+G ++ + + + D + ++G ++ +
Sbjct: 417 PDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIE 476
Query: 508 VFDRMP-DKNEISWTVMV 524
RMP + + + W ++
Sbjct: 477 FVKRMPMEADAVIWAALL 494
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 182/441 (41%), Gaps = 97/441 (21%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRK----------SLEAN 76
+LK ++G +H +IK G+ +++ T L+ +Y G R LE N
Sbjct: 129 VLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERN 188
Query: 77 EI--VKDLNGF-------------------DLVVHNCMINANIQWGNLEEAQRLFDGMPE 115
+ ++G+ D+V+ N M++ I+ G+++ A++LFD MP
Sbjct: 189 IVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPY 248
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
R+ +SW +++G+ +G VE FE P +NV SW I G+ NG FE L+ F ++
Sbjct: 249 RDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRM 308
Query: 176 LESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L G V PN+ T ++ ACA + LG V GF+ + V N+LI + K G
Sbjct: 309 LIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGL 368
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
++ A VF+ M+ +D++ +W+ MI
Sbjct: 369 IENAMEVFESMDLKDLI-------------------------------TWNSMICGLATH 397
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G +A LF QM KP+ F VL + L + G
Sbjct: 398 GCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYF--------------- 442
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
N++++ YS + + H + M+ +G G ++ A E MP
Sbjct: 443 NSMVNEYS---------------IAPQIEH---YGCMVDLFGRAGLLDRAIEFVKRMPME 484
Query: 415 ND-VSWSAIISGYLEHKQFDL 434
D V W+A++ +K DL
Sbjct: 485 ADAVIWAALLGACRIYKNIDL 505
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 201/702 (28%), Positives = 336/702 (47%), Gaps = 101/702 (14%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
SF+ +++ LL T + + G+ LHGH+I +G+ ++ +L ++L++ Y EA
Sbjct: 74 SFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEA 133
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
+ +V+ N F SW LI+ ++KH E
Sbjct: 134 HTLVETSNLF-------------------------------RPCSWNILITSYVKHKLYE 162
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
AAI + Q ++ GV+P+ TF SI KAC
Sbjct: 163 ------------------AAILAYKQ-------------MVSKGVRPDNFTFPSILKACG 191
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
E + + GL V I + V N+LI++ + GEVD AR++FD M +RD VSW
Sbjct: 192 ETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNS 251
Query: 256 ILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
++ + G EA +F+ M E N V+W+++ + G +A +L QM +
Sbjct: 252 MISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFG 311
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ I L A + + A+R G +H ++ + NAL+ +Y++C + +
Sbjct: 312 IHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAY 371
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
++F D ++WNSM+ G G++EEA
Sbjct: 372 MLFR---LNDDKSRITWNSMLSGLTHLGRVEEA--------------------------- 401
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGT 490
+F E+LL G P+ TF+S+L A VA L+ G++ H I K F + L
Sbjct: 402 ----LCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWN 457
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D YA++G + ++R+F + K+E+++T ++ G G +++ LFEEM++ I P
Sbjct: 458 ALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKP 517
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+ +T+++VL ACSHSGLV++ F M+ ++ + P HY C+ D+ R G L++A++
Sbjct: 518 DHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEI 577
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
I MP+ P S WA+L+ C + N I E A + L ++ EH YVL++N+YA+AG W
Sbjct: 578 ITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSW 637
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R LM + G+ K GCSWV+V ++ F +P+
Sbjct: 638 SKLAEIRTLMRDSGVAKIPGCSWVDVGSEFISFSVGDTSSPQ 679
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 204/739 (27%), Positives = 346/739 (46%), Gaps = 113/739 (15%)
Query: 14 ETSFNSYIETC-LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKS 72
E + + ++ C LC+ D+ G+ +H K G+ + ++ + L+ +Y +
Sbjct: 213 EFTLATGLKACSLCMALDL--------GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEI 264
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGF 128
A+++ + + V N ++N Q G++ +LF M E NE + T ++ G
Sbjct: 265 ELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGC 324
Query: 129 -----MKHGRVEESMWY---FERNPF---------------------------QNVISWT 153
+K G+V S+ +E N F +++ W+
Sbjct: 325 ANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWS 384
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
A I Q G S E++KLF + PN+ T S+ A + + G S+ ++K
Sbjct: 385 ALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKY 444
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIF 273
GFE V+V N+L+T+ +K G V + +++
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVH-------------------------------DGTKLY 473
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
+ M +R+ +SW+ ++ + G + +F M F PN F +L + + L +
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G VHAH++K ++ + F+ ALID+Y+KC +D DVA
Sbjct: 534 YGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA----------DVA---------- 573
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
F+ + R+ +W+ II+ Y + Q + F +M G PN+ T
Sbjct: 574 --------------FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+ L +S+ASLE G+ LH + K G D+F+G+AL D YAK G +E + +F+ +
Sbjct: 620 LAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALI 679
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++ I+W ++ G A++G +++ F M I+P+ +T +L ACSH GLV++G +
Sbjct: 680 RRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+FNSM + I P H C+VD+L R G+ E EDFI M ++ W ++L K +
Sbjct: 740 HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMH 799
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
N + E+A L++L E + Y+LLSNI+A+ GRW D VR LM+ KG++K GCSW
Sbjct: 800 NNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSW 859
Query: 694 VEVRNQVHFFFQKTDHNPK 712
VE QVH F +P+
Sbjct: 860 VEANGQVHTFVSHDYSHPQ 878
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 166/640 (25%), Positives = 278/640 (43%), Gaps = 116/640 (18%)
Query: 7 SLFSINPETSFNSYIETCLCLL--KDITSQNLVIQGRALHG----------HLIKTGIHK 54
SL ++ + +++Y L + +D+ S +IQG G + GI
Sbjct: 152 SLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP 211
Query: 55 ERY-LTTRL----LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRL 109
+ L T L L M L K + A L DL V + +++ + G +E A ++
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLL-LDLFVGSALVDLYAKCGEIELASKM 270
Query: 110 FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
F GMPE+N+V+W L++G+ + G V L
Sbjct: 271 FIGMPEQNDVTWNVLLNGYAQRGDVT-------------------------------GVL 299
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
KLF ++E VK NE T +++ K CA + + G + LI K G+E + + L+ +
Sbjct: 300 KLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMY 359
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
K G A VF ++K D+V W S +I
Sbjct: 360 SKCGLAIDAIGVFKTIKKPDIVVW-------------------------------SALIT 388
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
+Q G EE+ +LF M PN +LSA + L+ G +HA V K G E
Sbjct: 389 CLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFET 448
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
DV +SNAL+ +Y K G DG +++S+V++D ++SWN
Sbjct: 449 DVAVSNALVTMYMKNGCVHDGTKLYESMVDRD---LISWN-------------------- 485
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
A +SG + +D +F ML G IPN TF S+L + + + +
Sbjct: 486 -----------AYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
G+ +H IIK + F+ TAL D YAK +E + F+R+ ++ +WTV++ A+
Sbjct: 535 GRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQ 594
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGR 589
+ ++++N F +M++ + PNE T+ L CS ++ G + +SM +
Sbjct: 595 TNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG-QQLHSMVFKSGHVSDMF 653
Query: 590 HYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ +VDM ++ G + EAE ++ D+ AW +++ G
Sbjct: 654 VGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 240/533 (45%), Gaps = 72/533 (13%)
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W +L++ + K + + P ++V+SWTA I G V GF+ +++ LF ++ G+
Sbjct: 150 WVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGI 209
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
PNE T ++ KAC+ LG + FK G + V ++L+ L K GE++L
Sbjct: 210 MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIEL--- 266
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
A ++F MPE+N+V+W+V++ Y Q G
Sbjct: 267 ----------------------------ASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGV 298
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+LF M K N + VL A+ K L+ G +H+ ++K G E + FI L+D+
Sbjct: 299 LKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDM 358
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG D VF +I + D +V W+++I GQ EE+ +L
Sbjct: 359 YSKCGLAIDAIGVFKTIKKPD---IVVWSALITCLDQQGQSEESIKL------------- 402
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
F+ M L +PN+ T S+L A+ + +L+ G+ +H + K
Sbjct: 403 ------------------FHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKY 444
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF DV + AL Y K+G + ++++ M D++ ISW + GL + G + +F
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIF 504
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN-IKPNGRHYTCVVDMLS 599
M + PN T +S+L +CS V G + + I N + N T ++DM +
Sbjct: 505 YHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI--IKNQLDDNNFVCTALIDMYA 562
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
+ L +A+ N + D W +++ Y E+A+ ++ +E
Sbjct: 563 KCMYLEDADVAFNRLSVR-DLFTWTVIIT---NYAQTNQGEKALNYFRQMQQE 611
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 206/483 (42%), Gaps = 84/483 (17%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
+SS+ + CA + ++ GLI K + SL+ + K AR V +M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
RDVVSWT ++ + G+ ++ LF++
Sbjct: 175 DRDVVSWTALIQGLVA-------------------------------EGFANDSIYLFQE 203
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M PN + L A + AL G +HA K+G+ D+F+ +AL+DLY+KCGE
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ +F + E++ V+WN ++ GY +R DV+
Sbjct: 264 IELASKMFIGMPEQN---DVTWNVLLNGYA----------------QRGDVTG------- 297
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
V +F M+ N+ T ++VL A+ +L++G+ +H IIK G+ +
Sbjct: 298 --------VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNE 349
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F+G L D Y+K G + VF + + + W+ ++ L + G ++ESI LF M
Sbjct: 350 FIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLG 409
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI---YNIKPNGRHYTCVVDMLSRSGR 603
PN+ TI S+L A +++G L+Y S+ Y + + +V M ++G
Sbjct: 410 DTLPNQYTICSLLSAATNTG----NLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSG---CKTYKNEQIAERAVKNLWKLAEEH--PAGYV 658
+ + SM + D +W + LSG C Y +R + + + EE P Y
Sbjct: 466 VHDGTKLYESM-VDRDLISWNAYLSGLHDCGMY------DRPLTIFYHMLEEGFIPNMYT 518
Query: 659 LLS 661
+S
Sbjct: 519 FIS 521
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 177/360 (49%), Gaps = 41/360 (11%)
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+S K +S +L AS ++L +H ++K I D + +L+++Y+KC +
Sbjct: 106 WSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAY 165
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
RLV AK MP R+ VSW+A+I G +
Sbjct: 166 ARLVL-----------------------------AK-----MPDRDVVSWTALIQGLVAE 191
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
+ +F EM G +PN+ T ++ L A + +L+ GK +H + KLG D+F+G
Sbjct: 192 GFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVG 251
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
+AL D YAK G+IE + ++F MP++N+++W V++ G A+ G + LF M + +
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
NE T+ +VL C++S + +G + +S+ + N +VDM S+ G +A
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQG-QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370
Query: 610 FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK--NLWKLAEEHPAGYVLLSNIYASA 667
++ +PD W++L++ C + + +E ++K +L +L + P Y + S + A+
Sbjct: 371 VFKTIK-KPDIVVWSALIT-CLDQQGQ--SEESIKLFHLMRLGDTLPNQYTICSLLSAAT 426
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 198/631 (31%), Positives = 320/631 (50%), Gaps = 68/631 (10%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF VV+ C + +++ G A + G +++ + AL+ + K G + + F +
Sbjct: 204 GFSCVVNACTGSRDLEAGRKVHAMVVRTGY-DKDVFTANALVDMYSKLGDIHMAALVFGK 262
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
P +V+SW A I G V +G AL+L L++ SG+ PN T SSI KACA
Sbjct: 263 VPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322
Query: 204 L--SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
L + G + KA + D ++D++
Sbjct: 323 LGRQIHGFMIKACADS-------------------------------DDYIGVALVDMYA 351
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+ G L +AR++F+ +P ++ + W+ +I+ + G E+ LF +M + N + +
Sbjct: 352 KYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAA 411
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VL + ASL+A+ VHA KIG D + N LID Y KC + VF+ E
Sbjct: 412 VLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFE---EHS 468
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
+++++ SMI E+A +LF E
Sbjct: 469 SDNIIAFTSMITALSQCDHGEDAIKLF-------------------------------ME 497
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
ML G P+ SS+L A AS+++ E+GK +H +IK F DVF G AL TYAK G
Sbjct: 498 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGS 557
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
IE + F +PDK +SW+ M+ GLA+ G+ K ++++F M I PN +T+ SVL A
Sbjct: 558 IEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCA 617
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+H+GLVD+ YF+SM+ ++ I HY+C++D+L R+G+L +A + +NSMPFE ++
Sbjct: 618 CNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAA 677
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LL+ + +++ ++ + A + L+ L E +VLL+N YASAG W + VRKLM
Sbjct: 678 VWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMK 737
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ ++K SWVE++++VH F +P+
Sbjct: 738 DSKVKKEPAMSWVELKDRVHTFIVGDKSHPR 768
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 191/422 (45%), Gaps = 71/422 (16%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +SW++ + + N EAL F + GV+ NE + K CA D
Sbjct: 60 FDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAP--DA 116
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDV 259
LG+ V + G + V N+L+ + G VD AR VFD + R+ VSW ++
Sbjct: 117 GLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
F++ +A +F EM WS +PN F
Sbjct: 177 FVKNDRCSDAVELFGEM------VWS-------------------------GVRPNEFGF 205
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
S V++A + L +G VHA V++ G +KDVF +NAL+D+YSK G+ LVF + +
Sbjct: 206 SCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPK 265
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
D VVSWN+ I G L+G + A EL M
Sbjct: 266 TD---VVSWNAFISGCVLHGHDQHALELLLQMKS-------------------------- 296
Query: 440 NEMLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
SG +PN T SS+L CA A + G+ +HG +IK D ++G AL D YA
Sbjct: 297 -----SGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYA 351
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K G ++ +R+VF+ +P K+ + W ++ G + G ES++LF M K N T+ +
Sbjct: 352 KYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAA 411
Query: 558 VL 559
VL
Sbjct: 412 VL 413
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 159/365 (43%), Gaps = 38/365 (10%)
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
G ARR+FDE P+ VSWS ++ Y+ + P EA FR M + N IVL
Sbjct: 54 GSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCA 113
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
G+ VHA + G+ D+F++NAL+ +Y G + R VFD A V
Sbjct: 114 PDAGL---GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNA--V 168
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWN M+ + N + +A EL F EM+ SG
Sbjct: 169 SWNGMMSAFVKNDRCSDAVEL-------------------------------FGEMVWSG 197
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN+ FS V+ A LE G+ +H +++ G+ DVF AL D Y+K GDI +
Sbjct: 198 VRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAA 257
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL-FACSHS 565
VF ++P + +SW + G G+ + ++ L +M+ + + PN T+ S+L
Sbjct: 258 LVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAG 317
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
+ + + +VDM ++ G L +A +P D W +
Sbjct: 318 AGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIP-RKDLLLWNA 376
Query: 626 LLSGC 630
L+SGC
Sbjct: 377 LISGC 381
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 137/322 (42%), Gaps = 42/322 (13%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
S +L+ A+ ++L G H+HAH+LK G+ N L+ YSKC R VFD
Sbjct: 7 ISPLLTRYAATQSLFLGAHIHAHLLKSGLLHA--FRNHLLSFYSKCRLPGSARRVFDET- 63
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
D H VSW+S++ Y N EA A
Sbjct: 64 -PDPCH-VSWSSLVTAYSNNALPREA-------------------------------LAA 90
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F M G N+ VL A A L G +H + G D+F+ AL Y
Sbjct: 91 FRAMRARGVRCNEFALPIVL-KCAPDAGL--GVQVHAVAVSTGLSGDIFVANALVAMYGG 147
Query: 499 SGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
G ++ +RRVFD D+N +SW M+ ++ +++ LF EM + + PNE
Sbjct: 148 FGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSC 207
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
V+ AC+ S ++ G K ++M + +VDM S+ G + A +P +
Sbjct: 208 VVNACTGSRDLEAGRK-VHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP-K 265
Query: 618 PDSNAWASLLSGCKTYKNEQIA 639
D +W + +SGC + ++Q A
Sbjct: 266 TDVVSWNAFISGCVLHGHDQHA 287
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 115/321 (35%), Gaps = 80/321 (24%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +LK S + +H K G + ++ L+ Y AN++ ++
Sbjct: 408 TLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEH 467
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER-------------------------- 116
+ +++ MI A Q + E+A +LF M +
Sbjct: 468 SSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 527
Query: 117 -------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+ + AL+ + K G +E++ F P + V+SW+A I G Q+G
Sbjct: 528 QVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHG 587
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
AL +F ++++ + PN +T +S+ AC
Sbjct: 588 HGKRALDVFRRMVDERIAPNHITLTSVLCACNH--------------------------- 620
Query: 224 SLITLSLKMGEVDLARSVFDRMEK-----RDVVSWTVILDVFIEMGDLGEARRIFDEMP- 277
G VD A+ F M++ R ++ ++D+ G L +A + + MP
Sbjct: 621 --------AGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 672
Query: 278 ERNEVSWSVMIARYNQSGYPE 298
E N W ++A PE
Sbjct: 673 EANAAVWGALLAASRVHRDPE 693
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+ S +L A+ SL G +H ++K G + L Y+K S+RRVFD
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHA--FRNHLLSFYSKCRLPGSARRVFDET 63
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
PD +SW+ +V + + +E++ F M + NE + VL +GL
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL 118
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 326/613 (53%), Gaps = 54/613 (8%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G ++EA+++FD MP R+ VS+ ++I+ ++K+ + ++ F P +NV++ +A I G+V
Sbjct: 65 GKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYV 124
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ G +A ++F +++E ++V
Sbjct: 125 RAGRLDKARQVFDQMVE---------------------------------------RNVF 145
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
SL++ K+G VD A +F++M +++VVSWT + + + G + EAR IF++MPE+N
Sbjct: 146 SWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKN 205
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
++W+ M+ Y ++ +EAF LF QM + N ++I++S + L + +
Sbjct: 206 IIAWTAMVKSYVENDEIDEAFELFYQMPQR----NLYSWNIMISGCINANRLNEAIQLFN 261
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ +++ L+ ++ G + R FD + KD+A +WN+MI Y G
Sbjct: 262 SM----PQRNEVSWTTLVTGLARNGMMELARKYFDHMPTKDIA---AWNAMITAYVDQGS 314
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
M EA LF+ MP++N VSW+A+I GY + ML S PN++T +SVL A
Sbjct: 315 MAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTA 374
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
S+ L + HG +I LGF D L L TY++ GD+ S+R +FD++ K+ +SW
Sbjct: 375 CDSILELMQA---HGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSW 431
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T M+ + G ++ +F M ++ P+ +T + +L ACSH+GLV KG F+SM
Sbjct: 432 TAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSC 491
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM-PFEPDSNAWASLLSGCKTYKNEQIA 639
Y ++P HY+C+VD+L R+G +++A ++ M P E D +LL C+ +K+ +A
Sbjct: 492 AYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECDGAVLGALLGACRLHKDVGLA 551
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
+ L + YVLL+N YA+ G+W + VRK M E+ ++K G S +EV+ +
Sbjct: 552 NHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFAEVRKEMKERNVKKEPGFSQIEVKGK 611
Query: 700 VHFFFQKTDHNPK 712
H FF + +P+
Sbjct: 612 SHVFFVRDRSHPQ 624
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 233/480 (48%), Gaps = 69/480 (14%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
++ +YL ++ +A + +++ ++V + MI+ ++ G L++A+++FD M ERN SW
Sbjct: 88 MITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSW 147
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+L+SG+ K G V+E+M F + P +NV+SWT A+ G+ QNGF EA +F ++ E +
Sbjct: 148 TSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNI- 206
Query: 182 PNEVTFSSICKACAEINDFRLGLSVF----------------GLIFKAGFEKHVSVCNS- 224
+ ++++ K+ E ++ +F G I + + + NS
Sbjct: 207 ---IAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSM 263
Query: 225 ----------LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
L+T + G ++LAR FD M +D+ +W ++ +++ G + EA +F+
Sbjct: 264 PQRNEVSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFN 323
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
MPE+N VSW+ +I Y ++G + R M R +FKPN + + VL+A S+ L
Sbjct: 324 LMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTACDSILEL-- 381
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
M H V+ +G E+D ++N L+ YS+CG+ R +FD + KD +VSW +MI
Sbjct: 382 -MQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKD---IVSWTAMILA 437
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y +G A VF ML SG P+ TF
Sbjct: 438 YSNHGCGPHA-------------------------------LQVFARMLRSGAKPDGITF 466
Query: 455 SSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+L A + ++KG+ L + G + L D ++G++ + +V MP
Sbjct: 467 VGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMP 526
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 183/395 (46%), Gaps = 47/395 (11%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T ++ Y+ + + EA E+ + +L N MI+ I L EA +LF+ MP+RNEV
Sbjct: 210 TAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEV 269
Query: 120 SWTALISGFMKHGRVEESMWYFERNPF-------------------------------QN 148
SWT L++G ++G +E + YF+ P +N
Sbjct: 270 SWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKN 329
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
++SW A I G+ +NG +L+ + +L S KPNE T +S+ AC I + + G
Sbjct: 330 IVSWNALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTACDSILEL---MQAHG 386
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L+ GFE+ + N L+T + G+V AR +FD++E +D+VSWT ++ + G
Sbjct: 387 LVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPH 446
Query: 269 ARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVL 323
A ++F M + + +++ +++ + +G ++ LF M+ Y +P +S ++
Sbjct: 447 ALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLV 506
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL---VFDSIVEK 380
L + M V + + E D + AL+ C KD L + + ++EK
Sbjct: 507 DILGRAGEMNKAMKVVSEMPP--HECDGAVLGALL---GACRLHKDVGLANHIGEKLIEK 561
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+ S+ + Y G+ E E+ M +RN
Sbjct: 562 EPTSSGSYVLLANAYAACGKWNEFAEVRKEMKERN 596
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 154/299 (51%), Gaps = 25/299 (8%)
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N I GL G+++EA+++FD MP+R+ VS++++I+ YL++K +F EI
Sbjct: 55 NVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFR------EI 108
Query: 449 PNKSTF--SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P ++ S+++ L+K + + ++++ +VF T+L Y K G+++ +
Sbjct: 109 PERNVVADSAMISGYVRAGRLDKARQVFDQMVE----RNVFSWTSLVSGYFKIGNVDEAM 164
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
R+F++MP+KN +SWT V G A++G+ E+ ++F +M + +I + +++ + +
Sbjct: 165 RLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNI----IAWTAMVKSYVEND 220
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+D+ + F M P N+ + ++ + RL+EA NSMP + + +W +L
Sbjct: 221 EIDEAFELFYQM-PQRNL----YSWNIMISGCINANRLNEAIQLFNSMP-QRNEVSWTTL 274
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
++G + E A K + + A + + Y G +A N+ LM EK +
Sbjct: 275 VTGL---ARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNI 330
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 26/187 (13%)
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS---------GDI 502
+TF S+ + S +SL K + I P+ VF +DTY + G +
Sbjct: 15 ATFQSLRHLNRSFSSL---KTPNPSKITTRIPFPVFA----SDTYESNVKISNLGLRGKV 67
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ +R+VFD MP ++ +S+ M+ ++ ++ LF E+ + ++ + I + A
Sbjct: 68 KEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVRA- 126
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
G +DK + F+ M ++ N +T +V + G + EA N MP E + +
Sbjct: 127 ---GRLDKARQVFDQM-----VERNVFSWTSLVSGYFKIGNVDEAMRLFNQMP-EKNVVS 177
Query: 623 WASLLSG 629
W + + G
Sbjct: 178 WTTAVVG 184
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 277/522 (53%), Gaps = 34/522 (6%)
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +F S+ KA ++++ F GL + GL K GF VD
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGF-------------------VD------ 154
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D T ++ ++ + +AR +FD+M + V+W+++I Y Q+G+ ++A R
Sbjct: 155 ------DPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF M KP++ VLSA L G +H V G D + ALI++Y+
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
CG R ++D + K H++ +M+ GY G +++A+ +FD M +R+ V WSA+
Sbjct: 269 NCGAMDLARKIYDGLSSK---HLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAM 325
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
ISGY E Q +F+EML +P++ T SV+ A + V +L + +H + + GF
Sbjct: 326 ISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGF 385
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+ + AL D YAK G++ +R VF+ MP KN ISW+ M+ A G A +I LF
Sbjct: 386 GRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRR 445
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M++ +I PN +T + VL+AC H+GLV++G K F+SM + I P HY C+VD+ R+
Sbjct: 446 MKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRAN 505
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L +A + I +MPF P+ W SL+S C+ + ++ E A K L +L +H V+LSN
Sbjct: 506 FLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSN 565
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
IYA RW D +RK M+ KG+ K S +E+ NQVH F
Sbjct: 566 IYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFM 607
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 219/463 (47%), Gaps = 47/463 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T LI+ + R+ ++ F++ + ++W I G+ QNG +AL+LF + S +K
Sbjct: 160 TGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMK 219
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ V ++ AC + G ++ + G+ + +LI + G +DLAR +
Sbjct: 220 PDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKI 279
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
+D + + ++ T +L + ++G + +AR IFD+M ER+ V WS MI+ Y +S P+EA
Sbjct: 280 YDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEAL 339
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+LF +M + P+ V+SA + + AL +H +V + G + + ++NALID+Y
Sbjct: 340 KLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMY 399
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KCG R VF+++ K+ V+SW+SMI + ++G + A +LF M + N
Sbjct: 400 AKCGNLVKAREVFENMPRKN---VISWSSMINAFAMHGNADSAIKLFRRMKEVN------ 450
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KL 480
+E PN TF VL A +E+G+ L +I +
Sbjct: 451 -----IE--------------------PNGVTFIGVLYACGHAGLVEEGEKLFSSMINEH 485
Query: 481 GF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESIN 538
G P G + D Y ++ + + + + MP N I W ++ G A+ +
Sbjct: 486 GISPTREHYG-CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAE--LG 542
Query: 539 LFEEMEKTSITPNE---LTILSVLFACSHS----GLVDKGLKY 574
F + P+ L +LS ++A GL+ K + Y
Sbjct: 543 EFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSY 585
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 162/321 (50%), Gaps = 21/321 (6%)
Query: 76 NEIVKDLNGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+E VKD NG+ + H +IN G ++ A++++DG+ ++ + TA++SG+ K G
Sbjct: 245 HEFVKD-NGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGM 303
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
V+++ + F++ ++++ W+A I G+ ++ EALKLF ++L+ P+++T S+ A
Sbjct: 304 VKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISA 363
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C+ + + + ++GF + +SV N+LI + K G + AR VF+ M +++V+SW
Sbjct: 364 CSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISW 423
Query: 254 TVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-T 308
+ +++ F G+ A ++F M E N V++ ++ +G EE +LF M
Sbjct: 424 SSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMIN 483
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI--DLYSKC-- 364
+ P + ++ LR + + IE F N +I L S C
Sbjct: 484 EHGISPTREHYGCMVDLYCRANFLRKAIEL--------IETMPFAPNVIIWGSLMSACQV 535
Query: 365 -GETKDGRLVFDSIVEKDVAH 384
GE + G ++E + H
Sbjct: 536 HGEAELGEFAAKRLLELEPDH 556
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F N ++ ++ +F S+L A + V++ G ++HG KLGF D F+ T L
Sbjct: 105 IFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIA 164
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YA I +R +FD+M + ++W +++ G ++G+ +++ LFE+M + + P+ +
Sbjct: 165 MYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVI 224
Query: 555 ILSVLFACSHSG-----------LVDKGLKYFNSME-PIYNIKPN--------------- 587
+ +VL AC H+G + D G + ++ + N+ N
Sbjct: 225 LCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLS 284
Query: 588 GRHYTCVVDMLSRSGRLSEAED--FINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
+H MLS +L +D FI E D W++++SG Y + A+K
Sbjct: 285 SKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG---YAESDQPQEALKL 341
Query: 646 LWKLAEEH--PAGYVLLSNIYASA 667
++ ++ P +LS I A +
Sbjct: 342 FDEMLQKRSVPDQITMLSVISACS 365
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 45/240 (18%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV----------------------SW-- 121
DLV + MI+ + +EA +LFD M ++ V +W
Sbjct: 318 DLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIH 377
Query: 122 ---------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
ALI + K G + ++ FE P +NVISW++ I F +G +
Sbjct: 378 TYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNAD 437
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVCNSL 225
A+KLF ++ E ++PN VTF + AC G +F +I + G +
Sbjct: 438 SAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCM 497
Query: 226 ITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMG--DLGE--ARRIFDEMPERN 280
+ L + + A + + M +V+ W ++ G +LGE A+R+ + P+ +
Sbjct: 498 VDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHD 557
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 182/606 (30%), Positives = 328/606 (54%), Gaps = 55/606 (9%)
Query: 101 GNLEEAQRLFDG--MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
G++ A+++FD +P+R SW A++S + + + +++ F++ P +N +S+ I G
Sbjct: 33 GDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISG 92
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+V+NG +A K+F + E N V+++S+ + + +F + + ++
Sbjct: 93 YVKNGMVADARKVFDVMPER----NVVSWTSMVRGYVQEGMVEEAEKLFWEMPR----RN 144
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V +I LK +D A+ +FD + ++DVV T ++ + ++G L EAR +FDEM
Sbjct: 145 VVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKV 204
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
RN +W+ M++ Y ++G + A +LF M
Sbjct: 205 RNVFTWTTMVSGYAKNGRVDVARKLFEVMP------------------------------ 234
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
E++ A++ Y++ G K+ +F+++ V +V+ N MI +GL
Sbjct: 235 ---------ERNEVSWTAMLMGYTQSGRMKEAFELFEAM---PVKWIVACNEMILQFGLA 282
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLSGEIPNKSTFSSV 457
G+M A+ +F+ M +R++ +W+A+I + E K DL +F M G N + SV
Sbjct: 283 GEMHRARMMFEGMKERDEGTWNAMIKVF-ERKGLDLEALGLFARMQREGVALNFPSMISV 341
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L AS+ASL+ G+ +H ++++ F D+++ + L Y K GD+ ++ +F+R K+
Sbjct: 342 LSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDV 401
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
+ W M+ G ++ G +E++N+F +M + + P+E+T + VL ACS+SG V +G + F +
Sbjct: 402 VMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEA 461
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M+ Y ++P HY C+VD+L R+GR+ EA + + MP EPD+ W +LL C+ +
Sbjct: 462 MKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLD 521
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVR 697
+AE AV+ L KL ++ YVLLS++YA+ GRW D +RK + + + K GCSW+EV
Sbjct: 522 LAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVI-KFPGCSWIEVE 580
Query: 698 NQVHFF 703
+VH F
Sbjct: 581 KKVHMF 586
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 152/577 (26%), Positives = 253/577 (43%), Gaps = 114/577 (19%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y S K +A + + + V N MI+ ++ G + +A+++FD MPERN VSWT+++
Sbjct: 62 YFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMV 121
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G+++ G VEE+ F P +NV+SWT I G ++ +A KLF + E V
Sbjct: 122 RGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTN 181
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
C+ +++ R +F ++V ++++ K G VD+AR +F+ M
Sbjct: 182 MIGGYCQV-GRLDEAR-------ELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM 233
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMP---------------------------- 277
+R+ VSWT +L + + G + EA +F+ MP
Sbjct: 234 PERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFE 293
Query: 278 ---ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
ER+E +W+ MI + + G EA LF +M R N VLS ASL +L
Sbjct: 294 GMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDH 353
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VHA +++ ++D+++++ LI +Y KCG+ + +F+ + KD VV WNSMI G
Sbjct: 354 GRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKD---VVMWNSMITG 410
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
Y +G EEA VF++M SG P++ TF
Sbjct: 411 YSQHGLGEEA-------------------------------LNVFHDMCSSGVQPDEVTF 439
Query: 455 SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
VL A + +++G +++F A+ TY IE
Sbjct: 440 IGVLSACSYSGKVKEG-------------FEIF--EAMKCTYQVEPGIE----------- 473
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS---GLVDKG 571
+ MV L +G E++ L E+M + P+ + ++L AC + L +
Sbjct: 474 ----HYACMVDLLGRAGRVDEAMELVEKM---PMEPDAIVWGALLGACRNHMKLDLAEVA 526
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
++ +EP N Y + M + GR + E
Sbjct: 527 VEKLAKLEP-----KNAGPYVLLSHMYATKGRWRDVE 558
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 57/316 (18%)
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDE--MPERNEVSWSVMIARYNQSGYPEEAFR 302
++ R + S T + + +GD+ AR++FD +P+R SW+ M++ Y +S P +A
Sbjct: 14 VQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALL 73
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LF QM + NT F N +I Y
Sbjct: 74 LFDQMP----QRNTVSF-----------------------------------NGMISGYV 94
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
K G D R VFD + E++ VVSW SM+ GY G +EEA++LF MP+RN VSW+ +
Sbjct: 95 KNGMVADARKVFDVMPERN---VVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVM 151
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKS--TFSSVLCASASVASLEKGKDLHGKIIKL 480
I G L+ + D +F+ IP K ++++ V L++ ++L ++
Sbjct: 152 IGGLLKESRIDDAKKLFD------MIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMK-- 203
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
+VF T + YAK+G ++ +R++F+ MP++NE+SWT M+ G +SG KE+ LF
Sbjct: 204 --VRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELF 261
Query: 541 EEME-KTSITPNELTI 555
E M K + NE+ +
Sbjct: 262 EAMPVKWIVACNEMIL 277
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 206/471 (43%), Gaps = 83/471 (17%)
Query: 1 MKASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
M A R +F + PE + S+ +++ + +V + L + + + +
Sbjct: 98 MVADARKVFDVMPERNVVSWTS----MVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIG 153
Query: 61 RLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
LL + +A ++ + D+VV MI Q G L+EA+ LFD M RN +
Sbjct: 154 GLL----KESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFT 209
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF-------- 172
WT ++SG+ K+GRV+ + FE P +N +SWTA + G+ Q+G EA +LF
Sbjct: 210 WTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWI 269
Query: 173 ------------------LKLLESGVKP-NEVTFSSICKACAEINDFRLGLSVFGLIFKA 213
+++ G+K +E T++++ K L +F + +
Sbjct: 270 VACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQRE 329
Query: 214 GFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK----RDVVSWTVILDVFIEMGDLGEA 269
G + S++++ + +D R V R+ + +D+ +V++ ++++ GDL A
Sbjct: 330 GVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRA 389
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+ IF+ ++ V W+ MI Y+Q G EEA +F M +P+ F VLSA +
Sbjct: 390 KGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACS-- 447
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDVAH 384
YS G+ K+G +F+++ VE + H
Sbjct: 448 -------------------------------YS--GKVKEGFEIFEAMKCTYQVEPGIEH 474
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDL 434
+ M+ G G+++EA EL + MP D + W A++ H + DL
Sbjct: 475 ---YACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDL 522
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 312/621 (50%), Gaps = 100/621 (16%)
Query: 82 LNGFD--LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMW 139
++GFD V N ++ + G +E A+R+FD M ER
Sbjct: 151 MSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERT---------------------- 188
Query: 140 YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIND 199
++SW I G+ +NG EAL +F ++ G++P+ T S+ C+ + +
Sbjct: 189 ---------LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 200 FRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDV 259
+G V L V V N +GE D+ W +LD+
Sbjct: 240 LEVGRRVHAL---------VEVKN--------LGE--------------DISVWNSLLDM 268
Query: 260 FIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
+ + G++ EA+ IF EM +R+ VSW+ M+ Y +G A L + M S KPN
Sbjct: 269 YAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTL 328
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ VLSA ASL +L+ G +H ++ +E +V + ALID+Y+KC L F
Sbjct: 329 ASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVN---LSF----- 380
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+F K+ W+AIISG + + +F
Sbjct: 381 --------------------------RVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELF 414
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+ML+ PN +T +S+L A A + L++ +++HG +I+ GF + + T L D Y+K
Sbjct: 415 KQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKC 474
Query: 500 GDIESSRRVFDRMP--DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
G +ES+ +F+ +P DK+ I+W+ ++ G G+ + +I+LF++M ++ + PNE+T S
Sbjct: 475 GSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTS 534
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
+L ACSH+GLVD+GL F M + HYTCV+D+L R+GRL EA + I +M F
Sbjct: 535 ILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFR 594
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
P+ W +LL C ++N ++ E A K L++L + YVLL+NIY++ GRW DA +VR
Sbjct: 595 PNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVR 654
Query: 678 KLMTEKGLRKSGGCSWVEVRN 698
+M GLRK+ S +EVRN
Sbjct: 655 LMMNNIGLRKTPAHSLIEVRN 675
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 217/528 (41%), Gaps = 108/528 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +H + +G + ++ L+ MY+ + A + + LV N MIN +
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201
Query: 100 WGNLEEAQRLFDGM------PERNEV---------------------------------S 120
G ++EA +FD M P+ V
Sbjct: 202 NGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISV 261
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W +L+ + K G ++E+ F ++V+SWT + G++ NG + AL L + V
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESV 321
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KPN VT +S+ ACA + + G + G + E V V +LI + K V+L+
Sbjct: 322 KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFR 381
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VF + K+ W I+ I +G +A
Sbjct: 382 VFSKXSKQRTAPWNAIISGCI-------------------------------HNGLSRKA 410
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF+QM + PN + + +L A A L L+ ++H ++++ G + ++ LID+
Sbjct: 411 IELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDI 470
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG + +F+ I +KD +++W+++I GYG++G E A LFD
Sbjct: 471 YSKCGSLESAHNIFNGIPKKD-KDIITWSAIIAGYGMHGHGETAISLFD----------- 518
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-- 478
+M+ SG PN+ TF+S+L A + +++G L ++
Sbjct: 519 --------------------QMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLED 558
Query: 479 -KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMV 524
++ D + T + D ++G +E + + M + N W ++
Sbjct: 559 NQMSLRTDHY--TCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALL 604
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 148/315 (46%), Gaps = 34/315 (10%)
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
T+ + +L S K++ + +HAH + +G+ L YS
Sbjct: 18 TARYQSLLQRCTSRKSIPNTKQIHAHTITLGL---------LSSPYSH------------ 56
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
H++S S+ Y + G A++LFD + + SW+A+I Y
Sbjct: 57 --------HLLS--SLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDA 106
Query: 436 FAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F +ML SG P+ T+ V+ A E G +H + + GF D F+ +L
Sbjct: 107 LGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMA 166
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y G++E +RRVFD M ++ +SW M+ G ++G KE++ +F+ M I P+ T
Sbjct: 167 MYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCAT 226
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
++SVL CS+ ++ G + +++ + N+ + + ++DM ++ G + EA+ M
Sbjct: 227 VVSVLPVCSYLKELEVG-RRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEM 285
Query: 615 PFEPDSNAWASLLSG 629
+ D +W ++++G
Sbjct: 286 D-KRDVVSWTTMMNG 299
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 294/597 (49%), Gaps = 82/597 (13%)
Query: 110 FDGMPERNEV-SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
++G N V SW L M H R F+ P V W A G+ N F E
Sbjct: 97 YNGYVAPNVVTSWVGLKQ--MAHAR-----HLFDHFPDPKVELWNAISRGYFHNAFYREV 149
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
+ LF K+ V+PN TF + K+CA+I F G + + K G E + V +LI
Sbjct: 150 VFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLI-- 207
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
DV+ +G A ++F M ERN V+W+ MI
Sbjct: 208 -----------------------------DVYSGGRAIGSAYKLFVGMLERNIVAWTSMI 238
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
+ Y A RLF + E
Sbjct: 239 SGYILCNRVALARRLF---------------------------------------DLAPE 259
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
+DV + N ++ Y + G+ K R +FD++ +D +SWN+M+ GY NG +E ++LF
Sbjct: 260 RDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDT---MSWNTMLNGYANNGDVEACEQLF 316
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASL 467
+ MP+RN SW+ +I GY + F V F ML+ G +PN +T +VL A A + +L
Sbjct: 317 EEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGAL 376
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+ GK +H +GF +++G AL D Y+K G IE++ VF+ M K+ I+W M+ GL
Sbjct: 377 DLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGL 436
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A G +++ LF +M+ P+ +T + VL +C+H GLV++G YFNSM Y+I P
Sbjct: 437 ATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQ 496
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C+VD+ R+G L A +F+ MP E D+ WA+LL C+ YKN +AE A++ L
Sbjct: 497 IEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLI 556
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L ++PA YVLLSNIY GRW D ++ LM + G +K GCS +EV + V F+
Sbjct: 557 VLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFY 613
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 202/498 (40%), Gaps = 133/498 (26%)
Query: 95 NANIQWGNLEE---AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
N W L++ A+ LFD P+ W A+ G+
Sbjct: 104 NVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYF---------------------- 141
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
N F E + LF K+ V+PN TF + K+CA+I F G + +
Sbjct: 142 ---------HNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVI 192
Query: 212 KAG-------------------------------FEKHVSVCNSLITLSLKMGEVDLARS 240
K G E+++ S+I+ + V LAR
Sbjct: 193 KGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARR 252
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+FD +RDVV W +++ +IE+GD+ AR++FD MP R+ +SW+ M+ Y +G E
Sbjct: 253 LFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEAC 312
Query: 301 FRLFRQMTRYS-----------------------FK---------PNTSCFSIVLSALAS 328
+LF +M + FK PN + VLSA A
Sbjct: 313 EQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACAR 372
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L AL G VH + IG + +++ NALID+YSKCG ++ VF+S+ D+ +++W
Sbjct: 373 LGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM---DLKDLITW 429
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
NSMI G +G +A +F++M ++GE
Sbjct: 430 NSMICGLATHGCGADA-------------------------------LTLFHQMKINGEK 458
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P+ TF VLC+ + +E+G ++ + + + D + ++G ++ +
Sbjct: 459 PDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIE 518
Query: 508 VFDRMP-DKNEISWTVMV 524
RMP + + + W ++
Sbjct: 519 FVKRMPMEADAVIWAALL 536
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 182/441 (41%), Gaps = 97/441 (21%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRK----------SLEAN 76
+LK ++G +H +IK G+ +++ T L+ +Y G R LE N
Sbjct: 171 VLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERN 230
Query: 77 EI--VKDLNGF-------------------DLVVHNCMINANIQWGNLEEAQRLFDGMPE 115
+ ++G+ D+V+ N M++ I+ G+++ A++LFD MP
Sbjct: 231 IVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPY 290
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
R+ +SW +++G+ +G VE FE P +NV SW I G+ NG FE L+ F ++
Sbjct: 291 RDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRM 350
Query: 176 LESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L G V PN+ T ++ ACA + LG V GF+ + V N+LI + K G
Sbjct: 351 LIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGL 410
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
++ A VF+ M+ +D+ ++W+ MI
Sbjct: 411 IENAMEVFESMDLKDL-------------------------------ITWNSMICGLATH 439
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
G +A LF QM KP+ F VL + L + G
Sbjct: 440 GCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYF--------------- 484
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
N++++ YS + + H + M+ +G G ++ A E MP
Sbjct: 485 NSMVNEYS---------------IAPQIEH---YGCMVDLFGRAGLLDRAIEFVKRMPME 526
Query: 415 ND-VSWSAIISGYLEHKQFDL 434
D V W+A++ +K DL
Sbjct: 527 ADAVIWAALLGACRIYKNIDL 547
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 261/462 (56%), Gaps = 30/462 (6%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIV 322
G +G AR++FD +P + + M+ Y +G P +AF ++R+MT S +P+ F +
Sbjct: 47 GRMGYARKVFDGIPRPDLFMHNAMVRGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYL 106
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A A L R+G VH V+K+G KD ++ NALI++++KCG+ + ++ D E DV
Sbjct: 107 LRACAGLPGSRAGRQVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDV 166
Query: 383 A----------------------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+V WN M+G Y +G+ME A+ELFD P++
Sbjct: 167 VAWSAVIAGHAARGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEK 226
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ VSW+ II+GY VF+EM +G P+++T S+L A+ L+ G+ +H
Sbjct: 227 DVVSWNTIITGYAAQGMLKHALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIH 286
Query: 475 GKIIKLGFPY-DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
++ P+ + +G AL YAK GD+ ++ F+ M D + +W ++ GLA G A
Sbjct: 287 HQLHLERRPWISIVVGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQA 346
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
++S+ F++M + I PNE++ L VL ACSH+GLV+ G K+F M+ Y I+PN RHY+C
Sbjct: 347 EQSVRFFKKMLEKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSC 406
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+VDML R+G L EA +++M EP + W +LL C+T+ N + + + L + E+
Sbjct: 407 IVDMLGRAGLLDEAYAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDA 466
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
A YVLLS IYAS+G W+ R+ M +G+RK+ G + ++
Sbjct: 467 SADYVLLSGIYASSGEWLGVETERRSMDRRGIRKAAGYAQID 508
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 125/552 (22%), Positives = 225/552 (40%), Gaps = 152/552 (27%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +HGHL+ GI R R L++ +C+
Sbjct: 15 RQIHGHLVVGGIAAARLQHLRELLL-------------------------SCVATFR--- 46
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G + A+++FDG+P + A++ G+
Sbjct: 47 GRMGYARKVFDGIPRPDLFMHNAMVR-------------------------------GYA 75
Query: 161 QNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
G +A ++ ++ E S ++P+ TF + +ACA + R G V G + K GF K
Sbjct: 76 HAGAPGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRAGRQVHGAVVKLGFLKDA 135
Query: 220 SVCNSLITLSLKMGEVDL-------------------------------ARSVFDRMEKR 248
V N+LI + K G++ + AR +FD +
Sbjct: 136 YVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAARGDMAAARKMFDECTHK 195
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D+V W V+L + + G++ AR +FD PE++ VSW+ +I Y G + A +F +M
Sbjct: 196 DIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAAQGMLKHALEVFDEMR 255
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS----NALIDLYSKC 364
+ P+ + +LS A+ L +G +H ++ +E+ +IS NAL+ +Y+KC
Sbjct: 256 AAGWTPDEATIVSLLSCCANTGLLDAGRMIHH---QLHLERRPWISIVVGNALVSMYAKC 312
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWS 420
G+ F+++ + D V +WNS+IGG +GQ E++ F M ++ N++S+
Sbjct: 313 GDLHTAVEGFNTMKDTD---VWTWNSVIGGLAFHGQAEQSVRFFKKMLEKRIHPNEISFL 369
Query: 421 AII-----SGYLEHKQ-------------------------------FDLVFAVFNEMLL 444
++ +G +E Q D +A+ + M
Sbjct: 370 CVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRAGLLDEAYAIVSNMRC 429
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG--FPYDVFLGTALTDTYAKSGD- 501
P+ + ++L A + ++ GK + K++ + D L L+ YA SG+
Sbjct: 430 E---PSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADYVL---LSGIYASSGEW 483
Query: 502 --IESSRRVFDR 511
+E+ RR DR
Sbjct: 484 LGVETERRSMDR 495
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 180/397 (45%), Gaps = 22/397 (5%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +HG ++K G K+ Y+ L+ M+ A+ ++ + D+V + +I +
Sbjct: 119 GRQVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAA 178
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G++ A+++FD ++ V W ++ + KHG +E + F+R P ++V+SW I G+
Sbjct: 179 RGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGY 238
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH- 218
G AL++F ++ +G P+E T S+ CA G + + E+
Sbjct: 239 AAQGMLKHALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIHHQLH---LERRP 295
Query: 219 ---VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE 275
+ V N+L+++ K G++ A F+ M+ DV +W ++ G ++ R F +
Sbjct: 296 WISIVVGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFKK 355
Query: 276 MPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLK 330
M E+ NE+S+ ++ + +G E+ + F M RY +PN +S ++ L
Sbjct: 356 MLEKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLG--- 412
Query: 331 ALRSGM--HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
R+G+ +A V + E + L+ G G+LV + ++ + +
Sbjct: 413 --RAGLLDEAYAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADY 470
Query: 389 NSMIGGYGLNGQ---MEEAKELFDNMPKRNDVSWSAI 422
+ G Y +G+ +E + D R ++ I
Sbjct: 471 VLLSGIYASSGEWLGVETERRSMDRRGIRKAAGYAQI 507
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 111/273 (40%), Gaps = 17/273 (6%)
Query: 26 CLLKDITSQNLVIQGRALHG------HLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV 79
C KDI N+++ A HG L K+ ++ Y A E+
Sbjct: 192 CTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAAQGMLKHALEVF 251
Query: 80 KDLNGFD--------LVVHNCMINAN-IQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
++ + + +C N + G + Q + P + V AL+S + K
Sbjct: 252 DEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIHHQLHLERRPWISIVVGNALVSMYAK 311
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G + ++ F +V +W + I G +G + ++++ F K+LE + PNE++F +
Sbjct: 312 CGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFKKMLEKRIHPNEISFLCV 371
Query: 191 CKACAEINDFRLGLSVFGLIF-KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KR 248
AC+ G F L+ + G E + + ++ + + G +D A ++ M +
Sbjct: 372 LGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRAGLLDEAYAIVSNMRCEP 431
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
V W +L G++ + + +++ NE
Sbjct: 432 SAVVWRTLLGACRTHGNMTLGKLVREKLLNMNE 464
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 302/529 (57%), Gaps = 46/529 (8%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLGE 268
+F+ ++ V ++IT +K G ++ A+++FDR + ++VV+WT ++ ++ + E
Sbjct: 88 VFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEE 147
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARR+FD MP +N +SW+ MI Y + G+ ++A LF +M + N ++ V++A
Sbjct: 148 ARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMP----ERNVVSWNTVITAFMQ 203
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ + + + E+DV ++ SK G D RL+FD + V +VVSW
Sbjct: 204 RRRVDEAQELFNRM----PERDVISWTTMVAGLSKNGRIDDARLLFDKM---PVRNVVSW 256
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKR-------------------------------NDV 417
N+MI GY N +++EA +LF+ MP+R N V
Sbjct: 257 NTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVV 316
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGK 476
+W+A+ISG+++ + + +F+EM + + PN+ TF SVL A + +A+L +G+ +H
Sbjct: 317 TWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQI 376
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD--RMPDKNEISWTVMVRGLAESGYAK 534
I K + + +AL + Y+K G++E +R++FD + ++ +SW M+ A G+
Sbjct: 377 ISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGH 436
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
++I+LF+EM+ P+ +T +++L ACSH+GLVD+GLK F ++ +IK H+TC+
Sbjct: 437 KAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCL 496
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+ R+GRL EA DFI + +P ++ WA+LL+GC + + + + + L + E+
Sbjct: 497 VDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENA 556
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
Y++LSNIYAS G+W +A VR M +KGL+K GCSW+EV N VH F
Sbjct: 557 GTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVF 605
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 227/469 (48%), Gaps = 50/469 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++V +++ ++W +EEA+RLFD MP +N +SW +I G+ + G +++++ FE+ P
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMP 187
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SW I F+Q EA +LF ++ E V + + K I+D R
Sbjct: 188 ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKN-GRIDDAR---- 242
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
L+F ++V N++I + +D A +F++M +R++ SW ++ FI+ G
Sbjct: 243 ---LLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGK 299
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLS 324
L A F +M +N V+W+ +I+ + Q G EEA ++F +M + KPN F VL
Sbjct: 300 LERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLG 359
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD--SIVEKDV 382
A + L AL G +H + K ++ + +ALI++YSKCGE + R +FD SI +D
Sbjct: 360 ACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRD- 418
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAV 438
VVSWN MI Y +G +A LFD M + ++V++ A++S D +
Sbjct: 419 --VVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKL 476
Query: 439 FNEMLLSGEIPNKSTFSSVLC----------------------ASASV-ASLEKGKDLHG 475
F ++ I + + L SASV A+L G ++HG
Sbjct: 477 FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHG 536
Query: 476 KIIKLGFPYDVFLGT---------ALTDTYAKSGDIESSRRVFDRMPDK 515
I + L T L++ YA +G + V +M DK
Sbjct: 537 HIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDK 585
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 238/472 (50%), Gaps = 54/472 (11%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN-PFQNVISWTAAICGF 159
G + EA+++F+ MP+R+ VSWTA+I+G++K G +EE+ F+RN +NV++WTA + G+
Sbjct: 80 GKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGY 139
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
V+ EA +LF ++ N ++++++ + A L +F+ E++V
Sbjct: 140 VRWNRIEEARRLF----DAMPVKNVISWNTMIEGYARKGWIDQALD----LFEKMPERNV 191
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
N++IT ++ VD A+ +F+RM +RDV+SWT ++ + G + +AR +FD+MP R
Sbjct: 192 VSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVR 251
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP-NTSCFSIVLSA------------- 325
N VSW+ MI Y Q+ +EAF+LF QM NT + +
Sbjct: 252 NVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMS 311
Query: 326 ---LASLKALRSGMHVH----AHVLKIGIE----------KDVFIS--NALIDLYSKCGE 366
+ + A+ SG HV LKI E + F+S A L + C E
Sbjct: 312 NKNVVTWTAVISG-HVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALC-E 369
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN--MPKRNDVSWSAIIS 424
+ + V ++VA VVS ++I Y G++E A+++FD+ + R+ VSW+ +I+
Sbjct: 370 GQQIHQIISKTVYQEVADVVS--ALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIA 427
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK---LG 481
Y H ++F+EM G P+ T+ ++L A + +++G L +++ +
Sbjct: 428 AYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIK 487
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGY 532
D F T L D + ++G ++ + + K S W ++ G G+
Sbjct: 488 LREDHF--TCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGH 537
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 156/364 (42%), Gaps = 71/364 (19%)
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L RY+F SI+ S ++ + + + + V +V SN LI
Sbjct: 21 LLSSFGRYAFLLCNLHNSILSSQFSTCQVVPK---ISSPVRDFSANSNVARSNWLITQLG 77
Query: 363 KCGETKDGRLVFDSIVEKDVA-----------------------------HVVSWNSMIG 393
K G+ + R VF+ + ++DV +VV+W +++
Sbjct: 78 KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVS 137
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
GY ++EEA+ LFD MP +N +SW+ +I GY D +F +M P ++
Sbjct: 138 GYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKM------PERNV 191
Query: 454 FS--SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
S +V+ A +++ ++L ++ + DV T + +K+G I+ +R +FD+
Sbjct: 192 VSWNTVITAFMQRRRVDEAQELFNRMPE----RDVISWTTMVAGLSKNGRIDDARLLFDK 247
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEK-------TSIT--------------- 549
MP +N +SW M+ G A++ E+ LFE+M + T IT
Sbjct: 248 MPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFF 307
Query: 550 -----PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
N +T +V+ G ++ LK F+ M+ N+KPN + V+ S+ L
Sbjct: 308 YKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAAL 367
Query: 605 SEAE 608
E +
Sbjct: 368 CEGQ 371
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 50/248 (20%)
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
++V N +I G G++ EA+++F+ MP R+ VSW+A+I+GY++ + +F+
Sbjct: 64 SNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR- 122
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
+ I N T+ TAL Y + I
Sbjct: 123 --NDAIKNVVTW-----------------------------------TALVSGYVRWNRI 145
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFA 561
E +RR+FD MP KN ISW M+ G A G+ ++++LFE+M E+ ++ N +V+ A
Sbjct: 146 EEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWN-----TVITA 200
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
VD+ + FN M P ++ +T +V LS++GR+ +A + MP +
Sbjct: 201 FMQRRRVDEAQELFNRM-PERDVIS----WTTMVAGLSKNGRIDDARLLFDKMPVR-NVV 254
Query: 622 AWASLLSG 629
+W +++ G
Sbjct: 255 SWNTMIIG 262
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/570 (32%), Positives = 293/570 (51%), Gaps = 66/570 (11%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRL 202
+P ++ S+ I F++ G +AL LF+++L+ + V P++ T ++ K+C+ + D +
Sbjct: 130 HPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSV 189
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G V FK GF V NSLI + G+V A +F ++ + V++
Sbjct: 190 GRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIA---------- 239
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
W+ MIA Y ++G +E +F+ M + V
Sbjct: 240 ---------------------WNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSV 278
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
+A L G + + + G+ + ++ AL+D+Y+KCGE
Sbjct: 279 ATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGE---------------- 322
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+++A+ LFD M R+ V+WSA+ISGY + + A+FNEM
Sbjct: 323 ------------------LDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEM 364
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
+ PN T SVL A A + +LE GK +H I + P V LGTAL D YAK G I
Sbjct: 365 QGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCI 424
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ + + F+ MP +N +WT +++G+A +G ++E++ LF M + +I P ++T + VL AC
Sbjct: 425 KDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLAC 484
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SH LV++G ++F SM Y I P HY C+VD+L R+G + EA FI +MP EP++
Sbjct: 485 SHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVV 544
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LLS C +KN +I E A+K + L H Y+LLSN YAS G+W +A VRK M E
Sbjct: 545 WRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKE 604
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
KG+ K GCS +E+ + FF + +P+
Sbjct: 605 KGVEKIPGCSLIELEGTIFEFFAEDSEHPQ 634
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 193/475 (40%), Gaps = 67/475 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR + + K G ++++ L+ MY + A+ + + ++ N MI ++
Sbjct: 190 GRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVK 249
Query: 100 WGNLEEAQRLFDGMPER----NEVS------------------W---------------- 121
G+ +E +F GM E +EV+ W
Sbjct: 250 NGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL 309
Query: 122 -TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TAL+ + K G ++++ F+R ++V++W+A I G+ Q+ EAL +F ++ + V
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
PN+VT S+ ACA + G V I + V + +L+ K G + A
Sbjct: 370 NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN----EVSWSVMIARYNQSGY 296
F+ M R+ +WT ++ G EA +F M E N +V++ ++ +
Sbjct: 430 AFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCL 489
Query: 297 PEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFI 353
EE R F MT+ Y P + ++ L R+G+ A+ + + IE + +
Sbjct: 490 VEEGRRHFTSMTQDYGICPRIEHYGCMVDLLG-----RAGLIDEAYQFIRNMPIEPNAVV 544
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA----KEL-- 407
AL+ + + G IV D H ++ + Y GQ + A KE+
Sbjct: 545 WRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKE 604
Query: 408 --FDNMPKRNDVSWSAIISGYL----EHKQFDLVFAVFNEML----LSGEIPNKS 452
+ +P + + I + EH Q ++ +EM+ + G IPN +
Sbjct: 605 KGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTA 659
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/630 (29%), Positives = 313/630 (49%), Gaps = 71/630 (11%)
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+SW A + + G +AL ++ S +E T++S ACA R+G V
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ K+G + V SL+ ++D AR++FD + + + W+ ++ + L +A
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 270 RRIFDEMP-ERNEVSWSVMIARYNQSG--YPEEAFRLFRQM-TRYSFKPNTSCFSIVLSA 325
+ MP R+ +W+ +I+ Y + Y ++ LF Q+ PN + VL A
Sbjct: 153 LDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRA 212
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG-------------------- 365
+ AL G +H +++ G E + I++AL+DLY + G
Sbjct: 213 CVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITS 272
Query: 366 -----------ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
T+D +LVF + E D S+N MI Y G++E+ + +F+ MP+R
Sbjct: 273 NTLIAGFISMGRTEDAKLVFSQMTEHDSG---SYNLMIKAYADEGRLEDCRRMFEMMPRR 329
Query: 415 N--------------------------------DVSWSAIISGYLEHKQFDLVFAVFNEM 442
N V+W+++ISGY+++ Q +F M
Sbjct: 330 NMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVM 389
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
+ STF ++L A A++ ++E+GK +H + K F + ++GTAL D Y+K G +
Sbjct: 390 CRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCV 449
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+R F + N SWT ++ GLA++G+ E+I F M K ++ PNE+T L +L A
Sbjct: 450 SDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMAS 509
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+ +GLV+KG+++F+SME Y + P HYTC VD+L R+ R+ EAE FI+ MP D
Sbjct: 510 ARAGLVNKGMRFFHSMES-YGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPADGVV 568
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LL+ C + ++ E+ + L+ + +H + YV +SNIYA G+W D + VR +
Sbjct: 569 WGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRTRLRS 628
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K GCSW+EV++ VH F + ++P+
Sbjct: 629 INAKKEPGCSWIEVKDMVHVFLVEDRNHPE 658
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 220/482 (45%), Gaps = 77/482 (15%)
Query: 102 NLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGFV 160
+L+ A+ LFD + NE+ W+ ++ ++ + +++ +R P +++ +WTA I G+
Sbjct: 117 DLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYA 176
Query: 161 Q--NGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+ N + ++L+LF++LL E GV PNE T+ S+ +AC ++ G S+ G + ++GFE
Sbjct: 177 RGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFES 236
Query: 218 HVSVCNSLITLSLKMGEVD-------------------------------LARSVFDRME 246
+ ++L+ L + G VD A+ VF +M
Sbjct: 237 EQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMT 296
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMP----------------------------- 277
+ D S+ +++ + + G L + RR+F+ MP
Sbjct: 297 EHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQ 356
Query: 278 ---ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
ERN V+W+ MI+ Y Q+ EA +LF M R S + + S F +L A A++ +
Sbjct: 357 IKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHACATIGTIEQ 416
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VHA + K E + ++ AL+D+YSKCG D R F I+ +VA SW S+I G
Sbjct: 417 GKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVA---SWTSLING 473
Query: 395 YGLNGQMEEA----KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
NG EA + N K N++++ I+ + F+ M G +P
Sbjct: 474 LAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPT 533
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
++ CA + + ++ I K+ P D + AL + D+E +V +
Sbjct: 534 VEHYT---CAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAE 590
Query: 511 RM 512
++
Sbjct: 591 KL 592
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 181/403 (44%), Gaps = 45/403 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSR----------------------------- 70
GR++HG LI++G E+ +T+ L+ +Y S
Sbjct: 222 GRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFIS 281
Query: 71 --KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
++ +A + + D +N MI A G LE+ +R+F+ MP RN V+ +++S
Sbjct: 282 MGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNMVTLNSMMSVL 341
Query: 129 MKHGRVEESMWYFER-NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+++G++EE FE+ +N ++W + I G+VQN S EALKLF + ++ + TF
Sbjct: 342 LQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTF 401
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
++ ACA I G V L+ K FE + V +L+ + K G V AR+ F +
Sbjct: 402 PALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMS 461
Query: 248 RDVVSWTVILDVFIEMGDLGEA----RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+V SWT +++ + G EA R+ + NE+++ ++ ++G + R
Sbjct: 462 PNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRF 521
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F M Y P ++ + L + +R + K+ I D + AL+ +
Sbjct: 522 FHSMESYGVVPTVEHYTCAVDLLGRARRVR---EAEKFISKMPIPADGVVWGALL---TA 575
Query: 364 CGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
C T D G V + + H+ ++ +M Y G+ E+
Sbjct: 576 CWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWED 618
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 107/315 (33%), Gaps = 66/315 (20%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF++ S T LL + + QG+ +H L KT Y+ T L+ MY
Sbjct: 385 LFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMY- 443
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
+ G + +A+ F + N SWT+LI+G
Sbjct: 444 ------------------------------SKCGCVSDARAAFSCIMSPNVASWTSLING 473
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
QNG EA+ F ++L++ VKPNE+TF
Sbjct: 474 -------------------------------LAQNGHWMEAIVQFARMLKNNVKPNEITF 502
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME- 246
I A A G+ F + G V + L + V A +M
Sbjct: 503 LGILMASARAGLVNKGMRFFHSMESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPI 562
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDE---MPERNEVSWSVMIARYNQSGYPEEAFRL 303
D V W +L DL ++ ++ M ++ ++ M Y + G E+ ++
Sbjct: 563 PADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKV 622
Query: 304 FRQMTRYSFKPNTSC 318
++ + K C
Sbjct: 623 RTRLRSINAKKEPGC 637
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 294/579 (50%), Gaps = 65/579 (11%)
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
+ + S F F N+ + + I GFV N E L LFL + + G+ + TF + K
Sbjct: 60 QTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLK 119
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
AC + +LG+ + L+ K GF DV +
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGF-------------------------------NHDVAA 148
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
T +L ++ G L +A ++FDE+P+R+ V+W+ + + Y SG EA LF++M
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
KP++ VLSA + L SG + ++ ++ ++K+ F+ L++LY+KCG+ + R
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
VFDS+VEKD +V+W++MI GY N +E ELF M + N L+ QF
Sbjct: 269 VFDSMVEKD---IVTWSTMIQGYASNSFPKEGIELFLQMLQEN-----------LKPDQF 314
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+V L + AS+ +L+ G+ I + F ++F+ AL
Sbjct: 315 SIV--------------------GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK G + VF M +K+ + + GLA++G+ K S +F + EK I+P+
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
T L +L C H+GL+ GL++FN++ +Y +K HY C+VD+ R+G L +A I
Sbjct: 415 STFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
MP P++ W +LLSGC+ K+ Q+AE +K L L + YV LSNIY+ GRW +
Sbjct: 475 DMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDE 534
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A VR +M +KG++K G SW+E+ +VH F +P
Sbjct: 535 AAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHP 573
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 183/409 (44%), Gaps = 71/409 (17%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+L+S + GR+ ++ F+ P ++V++WTA G+ +G EA+ LF K++E GVK
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ + AC + D G + + + +K+ V +L+ L K G+++ ARSV
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M ++D+V +WS MI Y + +P+E
Sbjct: 270 FDSMVEKDIV-------------------------------TWSTMIQGYASNSFPKEGI 298
Query: 302 RLFRQMTRYSFKPNTSCFSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
LF QM + + KP+ FSIV LS+ ASL AL G + + + ++F++NALID
Sbjct: 299 ELFLQMLQENLKPDQ--FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG G VF + EKD +V N+ I G NG ++
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKD---IVIMNAAISGLAKNGHVK----------------- 396
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-I 478
L FAVF + G P+ STF +LC ++ G I
Sbjct: 397 --------------LSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRG 526
V + D + ++G ++ + R+ MP + N I W ++ G
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 177/444 (39%), Gaps = 104/444 (23%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LH ++K G + + T LL +Y GS + +A+++ ++ +V + +
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 100 WGNLEEAQRLFDGMPE---------------------------------------RNEVS 120
G EA LF M E +N
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
T L++ + K G++E++ F+ +++++W+ I G+ N F E ++LFL++L+ +
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP++ + +CA + LG LI + F ++ + N+LI + K G +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VF M+++D+ V + I+ ++G+ + +
Sbjct: 370 VFKEMKEKDI-------------------------------VIMNAAISGLAKNGHVKLS 398
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F +F Q + P+ S F +L VHA +++ G+ NA+ +
Sbjct: 399 FAVFGQTEKLGISPDGSTFLGLLCGC-----------VHAGLIQDGLR----FFNAISCV 443
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR-NDVSW 419
Y+ +++ V H + M+ +G G +++A L +MP R N + W
Sbjct: 444 YA---------------LKRTVEH---YGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 420 SAIISGYLEHKQFDLVFAVFNEML 443
A++SG K L V E++
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELI 509
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 16/234 (6%)
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ ++ T SV C ++ K +H +I +D FL L +
Sbjct: 10 TSKVQQIKTLISVAC------TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKY 63
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
S +F N + ++ G + E+++LF + K + + T VL AC+
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+ G+ +S+ + T ++ + S SGRL++A + +P + W
Sbjct: 124 ASSRKLGID-LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWT 181
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA-------SAGRWI 671
+L SG T + A K + ++ + P Y ++ + A +G WI
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVK-PDSYFIVQVLSACVHVGDLDSGEWI 234
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 274/490 (55%), Gaps = 11/490 (2%)
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
+K+G+ A+ V ++ ++ ++ ++ GDL A +FD + + + ++ +I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMV-AMYASSGDLDSAVVVFDRIDNPSSLLYNSIIR 151
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKP---NTSCFSIVLSALASLKALRSGMHVHAHVLKIG 346
Y + G R F + VL + A L + G VH L++G
Sbjct: 152 AYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVG 211
Query: 347 IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
+E D ++ +LID+Y KCG D R +FD ++ +D+A SWN++I GY G++ A++
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMA---SWNALIAGYMKEGEIGVAED 268
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE--IPNKSTFSSVLCASASV 464
LF+ M RN VSW+A+ISGY ++ + +F+EML G PN T SVL A A
Sbjct: 269 LFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQS 328
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD--KNEISWTV 522
A+LE+G+ +H +G + + TAL YAK + +R FD + KN I+W
Sbjct: 329 AALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNT 388
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M+ A G E++++FE M + + P+ +T + +L CSHSGL+D GL +FN M I+
Sbjct: 389 MITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIH 448
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+++P HY CVVD+L R+GRL EA++ I+ MP + + W +LL+ C++++N +IAE A
Sbjct: 449 SVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELA 508
Query: 643 VKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHF 702
+ L+ L ++ YVLLSN+YA AG W + +R L+ +G++KS GCSW+E+ + H
Sbjct: 509 ARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHL 568
Query: 703 FFQKTDHNPK 712
F +P+
Sbjct: 569 FMGADKSHPQ 578
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 214/450 (47%), Gaps = 16/450 (3%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
I+ G AQ + G+ + N +++ + G ++ ++ F+R + + + + I
Sbjct: 93 IKLGQQAHAQIVLHGL-QPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIR 151
Query: 158 GFVQNGFSFEA---LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
+ ++G L+ + ++ G+ + T + K+CA+++ +G V G + G
Sbjct: 152 AYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVG 211
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
E V SLI + +K G + AR +FD+M RD+ SW ++ +++ G++G A +F+
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFE 271
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFSIVLSALASLKAL 332
M RN VSW+ MI+ Y Q+G+ E+A LF +M + KPN VL A A AL
Sbjct: 272 RMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAAL 331
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
G +H IG+ + + AL +Y+KC + R FD I + ++++WN+MI
Sbjct: 332 ERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNG-KNLIAWNTMI 390
Query: 393 GGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
Y +G EA +F+NM + + V++ ++SG D FN+M +
Sbjct: 391 TAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSV 450
Query: 449 -PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP--YDVFLGTALTDTYAKSGDIESS 505
P ++ V+ L + K+L ++ P + L + + ++ ++
Sbjct: 451 EPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAEL-AA 509
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
RR+F PD N ++ ++ AE+G +E
Sbjct: 510 RRLFVLEPD-NSGNYVLLSNLYAEAGMWEE 538
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 40/310 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V GR +HG ++ G+ + Y+ L+ MY
Sbjct: 187 VLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMY-------------------- 226
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
++ G + +A++LFD M R+ SW ALI+G+MK G + + FER
Sbjct: 227 -----------VKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEH 275
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACAEINDFRLGL 204
+N++SWTA I G+ QNGF+ +AL LF ++L+ G +KPN VT S+ ACA+ G
Sbjct: 276 RNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGR 335
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK--RDVVSWTVILDVFIE 262
+ G + SV +L + K + AR FD + + +++++W ++ +
Sbjct: 336 RIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYAS 395
Query: 263 MGDLGEARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTS 317
G EA IF+ M + + V++ +++ + SG + F M T +S +P
Sbjct: 396 HGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVE 455
Query: 318 CFSIVLSALA 327
++ V+ L
Sbjct: 456 HYACVVDLLG 465
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 142/327 (43%), Gaps = 65/327 (19%)
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ S ++ + L ++ G HA ++ G++ + F++ ++ +Y+ G+ +V
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FD I D + +NS+I Y +G +
Sbjct: 135 FDRI---DNPSSLLYNSIIRAYTRHGXXXXXXXXLE------------------------ 167
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+ M G + + T VL + A ++ + G+ +HG+ +++G D ++G +L
Sbjct: 168 ----AYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLI 223
Query: 494 DTYAKSGDIESSRRVFD-------------------------------RMPDKNEISWTV 522
D Y K G I +R++FD RM +N +SWT
Sbjct: 224 DMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTA 283
Query: 523 MVRGLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ G ++G+A++++ LF+EM + + + PN +TI+SVL AC+ S +++G + +
Sbjct: 284 MISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANG 343
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEA 607
I + N T + M ++ L EA
Sbjct: 344 I-GLHLNSSVQTALAGMYAKCYSLVEA 369
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 78/186 (41%), Gaps = 9/186 (4%)
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ S+++ + ++ G+ H +I+ G + FL + YA SGD++S+ V
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 509 FDRMPDKNEISWTVMVRGLAESG---YAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
FDR+ + + + + ++R G + + M + + T+ VL +C+
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHY--TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
V G + G Y ++DM + G + +A + M D +W
Sbjct: 195 SRVCMGRCVHGQG---LRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASW 250
Query: 624 ASLLSG 629
+L++G
Sbjct: 251 NALIAG 256
>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
Length = 1849
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/594 (29%), Positives = 313/594 (52%), Gaps = 40/594 (6%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVK 181
+L+S +++ ++E++ + F ++++SW A I G+ NG +AL+LF + + +K
Sbjct: 1219 SLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIK 1278
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ VT S+ ACA +++ ++ + G I + G + SV N+L++ K A
Sbjct: 1279 PDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQ 1338
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
F + ++D++SW ILD F +SG
Sbjct: 1339 TFLMISRKDLISWNAILDAF-------------------------------TESGCETHL 1367
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI---EKDVFISNAL 357
L M R +P++ ++ A++ ++ H++ ++ G+ + + N +
Sbjct: 1368 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGM 1427
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
+D Y+KCG K +F S+ EK +VV+ NSMI GY + ++A +F+ M + +
Sbjct: 1428 LDAYAKCGNMKYAVNIFGSLSEKR--NVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLT 1485
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+W+ ++ Y E+ D ++F+E+ G P+ T S+L A A +AS+ + HG +
Sbjct: 1486 TWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYV 1545
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
I+ F DV L A D Y+K G + + ++F P K+ + +T MV G A G +E++
Sbjct: 1546 IRACF-NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEAL 1604
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
+F M + + P+ + I +VLFACSH+GLVD+G K FNS+E ++ +P Y CVVD+
Sbjct: 1605 RIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDL 1664
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGY 657
L+R GR+ +A F+ MP E ++N W +LL C+T+ ++ +L+K+ ++ Y
Sbjct: 1665 LARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNY 1724
Query: 658 VLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEV-RNQVHFFFQKTDHN 710
V++SN+YA+ RW M +R+LM + L+K GCSW+EV R + FQK + N
Sbjct: 1725 VVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNMGSFQKGNAN 1778
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 229/541 (42%), Gaps = 135/541 (24%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK + + + G LHG+ +K G + L LL +Y S
Sbjct: 977 LLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKS----------------- 1019
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G L+ +LF M +R+ V W ++SG
Sbjct: 1020 --------------GALDYCNKLFGEMDQRDPVIWNIVLSG------------------- 1046
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ GF E ++LF + + + KPN VT + + CA + + G S
Sbjct: 1047 ---------LAGF--QSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKS 1094
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEV-DLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V + K+G E H N+LI++ K G V A + F+R+E +DVVS
Sbjct: 1095 VHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVS------------ 1142
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
W+ +IA ++++ + EEAF+LF M + +PN + + +L
Sbjct: 1143 -------------------WNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILP 1183
Query: 325 ALASLK---ALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
ASL+ R G VH HVL+ + + +DV + N+L+ Y +
Sbjct: 1184 VCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIX--------------- 1228
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
QME+A+ LF NM R+ VSW+AII+GY + ++ +F+
Sbjct: 1229 -------------------QMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFS 1269
Query: 441 EML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAK 498
E + L P+ T SVL A A V +L+ K +HG II+ G D +G AL YAK
Sbjct: 1270 EFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAK 1329
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
+++ + F + K+ ISW ++ ESG +NL M + I P+ +TIL++
Sbjct: 1330 CNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTI 1389
Query: 559 L 559
+
Sbjct: 1390 I 1390
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 185/408 (45%), Gaps = 76/408 (18%)
Query: 167 EALKLFLKLLES--GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
EAL LFL+ + G KPN +++ K+C + R G + G K G S+C
Sbjct: 952 EALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKG 1011
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ L K G +D ++F EM +R+ V W
Sbjct: 1012 LLNLYAKSGALDYCN-------------------------------KLFGEMDQRDPVIW 1040
Query: 285 SVMIARYNQ-SGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
+++++ + E RLFR M + KPN+ +IVL A L+ +G VH++V
Sbjct: 1041 NIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYV 1099
Query: 343 LKIGIEKDVFISNALIDLYSKCGET-KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+K G+E NALI +Y+KCG D F+ I KDV
Sbjct: 1100 IKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDV------------------- 1140
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
VSW+A+I+G+ E+K + F +F+ ML PN +T +S+L
Sbjct: 1141 ---------------VSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVC 1185
Query: 462 ASV---ASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
AS+ A GK++H +++ + DV + +L Y + +E + +F M ++
Sbjct: 1186 ASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDL 1245
Query: 518 ISWTVMVRGLAESGYAKESINLFEE-MEKTSITPNELTILSVLFACSH 564
+SW ++ G A +G +++ LF E + +I P+ +T++SVL AC+H
Sbjct: 1246 VSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAH 1293
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 187/419 (44%), Gaps = 42/419 (10%)
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
G+ E V AL+S + K + ++ F +++ISW A + F ++G + L
Sbjct: 1312 GLREDTSVG-NALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNL 1370
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF---EKHVSVCNSLITL 228
+L G++P+ +T +I + A ++ + + G + ++ N ++
Sbjct: 1371 LHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDA 1430
Query: 229 SLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
K G + A ++F + EKR+VV+ ++ ++ +A IF+ M E + +W++M
Sbjct: 1431 YAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLM 1490
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
+ Y ++ +P++A LF ++ KP+ +L A A + ++ H +V++
Sbjct: 1491 VRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF 1550
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
DV ++ A ID+YSKCG +F S +KD +V + +M+GG+ ++G EEA
Sbjct: 1551 -NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKD---LVMFTAMVGGFAMHGMGEEA--- 1603
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
+F+ ML G P+ ++VL A + +
Sbjct: 1604 ----------------------------LRIFSYMLELGVKPDHVIITAVLFACSHAGLV 1635
Query: 468 EKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV 524
++G + I K+ GF + + D A+ G I+ + RMP + N W ++
Sbjct: 1636 DEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLL 1694
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 155/330 (46%), Gaps = 10/330 (3%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPE-RNEVSWTALISGFMKHGRVEESMWYFERNPFQNV 149
N M++A + GN++ A +F + E RN V+ ++ISG++ +++ F ++
Sbjct: 1425 NGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETDL 1484
Query: 150 ISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
+W + + +N F +AL LF +L G+KP+ VT SI ACA + + G
Sbjct: 1485 TTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGY 1544
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+ +A F V + + I + K G V A +F ++D+V +T ++ F G EA
Sbjct: 1545 VIRACFND-VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEA 1603
Query: 270 RRIFDEMPE----RNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLS 324
RIF M E + V + ++ + +G +E +++F + + + F+P ++ V+
Sbjct: 1604 LRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVD 1663
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
LA ++ + V ++ IE + I L+ E + GR+V D + + + +
Sbjct: 1664 LLARGGRIKD---AYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDN 1720
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+ ++ M Y + + + E+ M R
Sbjct: 1721 IGNYVVMSNLYAADARWDGVMEIRRLMRTR 1750
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 12/265 (4%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A I + K G V + F +P ++++ +TA + GF +G EAL++F +LE GVKP
Sbjct: 1558 AFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKP 1617
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ V +++ AC+ G +F I K GF+ + ++ L + G + A +
Sbjct: 1618 DHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTF 1677
Query: 242 FDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEM---PERNEVSWSVMIARYNQSGYP 297
RM + + W +L ++ R + D + N ++ VM Y
Sbjct: 1678 VTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARW 1737
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+ + R M K C I + ++ + + G +A+ +G++ V +
Sbjct: 1738 DGVMEIRRLMRTRELKKPAGCSWIEVGRRKNMGSFQKG---NANAPGLGLKDSVRGRSKW 1794
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDV 382
+ K G +K GRLV+ S +++V
Sbjct: 1795 L---KKLGTSK-GRLVWGSCSKREV 1815
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN +++L + + +++ G LHG +KLG L L + YAKSG ++
Sbjct: 966 GYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYC 1025
Query: 506 RRVFDRMPDKNEISWTVMVRGLAE-SGYAKESINLFEEMEKTS-ITPNELTILSVLFACS 563
++F M ++ + W +++ GLA + E + LF M + PN +TI VL C+
Sbjct: 1026 NKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA 1085
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYT----CVVDMLSRSGRL-SEAEDFINSMPFEP 618
L + K +S Y IK +T ++ M ++ G + S+A N + F+
Sbjct: 1086 R--LREDAGKSVHS----YVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFK- 1138
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVK 644
D +W ++++G + + E A K
Sbjct: 1139 DVVSWNAVIAG---FSENKFTEEAFK 1161
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 292/543 (53%), Gaps = 69/543 (12%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL L+ ++ SG+KP++ T++ + ACA++ + +G SV +FK G E+ V + +SLI
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K G+V G AR++FDE+ ER+ VSW+ M
Sbjct: 176 MYAKCGQV-------------------------------GYARKLFDEITERDTVSWNSM 204
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y+++GY ++A LFR+M F+P+ +L A + L LR+G + + I
Sbjct: 205 ISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKI 264
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
F+ + LI +Y KC G ++ A+ +
Sbjct: 265 GLSTFLGSKLISMYGKC----------------------------------GDLDSARRV 290
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ M K++ V+W+A+I+ Y ++ + F +F EM +G P+ T S+VL A SV +L
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 350
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E GK + +L +++++ T L D Y K G +E + RVF+ MP KNE +W M+
Sbjct: 351 ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAY 410
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A G+AKE++ LF+ M S+ P+++T + VL AC H+GLV +G +YF+ M ++ + P
Sbjct: 411 AHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 467
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HYT ++D+LSR+G L EA +F+ P +PD A++L C K+ I E+A++ L
Sbjct: 468 IEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLM 527
Query: 648 KLAEEHPAG-YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
++ E AG YV+ SN+ A W ++ +R LM ++G+ K+ GCSW+E+ ++ F
Sbjct: 528 EMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Query: 707 TDH 709
+D+
Sbjct: 588 SDY 590
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 204/410 (49%), Gaps = 40/410 (9%)
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI-ARYNQ 293
V+ R + +M V ++ +E+GD + +F E N S++ MI N
Sbjct: 50 VNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNT 109
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
E A L+R+M KP+ ++ V A A L+ + G VH+ + K+G+E+DV I
Sbjct: 110 WNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHI 169
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+++LI +Y+KCG+ GY A++LFD + +
Sbjct: 170 NHSLIMMYAKCGQV--------------------------GY--------ARKLFDEITE 195
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
R+ VSW+++ISGY E +F +M G P++ T S+L A + + L G+ L
Sbjct: 196 RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
I FLG+ L Y K GD++S+RRVF++M K+ ++WT M+ +++G +
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKS 315
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
E+ LF EMEKT ++P+ T+ +VL AC G ++ G K + +++ N T
Sbjct: 316 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNIYVATG 374
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+VDM + GR+ EA +MP + ++ W ++++ Y ++ A+ A+
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMITA---YAHQGHAKEAL 420
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 191/423 (45%), Gaps = 102/423 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR++H L K G+ ++ ++ L++MY +
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMY-------------------------------AK 179
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + A++LFD + ER+ VSW ++IS G+
Sbjct: 180 CGQVGYARKLFDEITERDTVSWNSMIS-------------------------------GY 208
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG--LSVFGLIFKAGFEK 217
+ G++ +A+ LF K+ E G +P+E T S+ AC+ + D R G L + K G
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST 268
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+ + LI++ K G++D AR VF++M K+D V+WT ++ V+
Sbjct: 269 FLG--SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVY----------------- 309
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+Q+G EAF+LF +M + P+ S VLSA S+ AL G
Sbjct: 310 --------------SQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+ H ++ ++ +++++ L+D+Y KCG ++ VF+++ K+ A +WN+MI Y
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA---TWNAMITAYAH 412
Query: 398 NGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEM-LLSGEIPNKSTFS 455
G +EA LFD M +D+++ ++S + F+EM + G +P ++
Sbjct: 413 QGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYT 472
Query: 456 SVL 458
+++
Sbjct: 473 NII 475
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 144/351 (41%), Gaps = 59/351 (16%)
Query: 52 IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF----DLVVHNCMINANIQWGNLEEAQ 107
I K+R T ++ +Y + KS EA ++ ++ D + +++A G LE +
Sbjct: 295 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 108 RLFDGMPE----RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
++ E N T L+ + K GRVEE++ FE P +N +W A I + G
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 414
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ EAL LF ++ V P+++TF + AC GL+ + C
Sbjct: 415 HAKEALLLFDRM---SVPPSDITFIGVLSACVHA----------GLVHQG--------CR 453
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-NEV 282
+S S+F + K + +T I+D+ G L EA + P + +E+
Sbjct: 454 YFHEMS----------SMFGLVPK--IEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 501
Query: 283 SWSVMIA---RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+ ++ + E+A R+ +M N + I + LA +K +
Sbjct: 502 MLAAILGACHKRKDVAIREKAMRMLMEMKE---AKNAGNYVISSNVLADMKMWDESAKMR 558
Query: 340 AHVLKIGIEKD-----VFISNALIDL-----YSKCGETKDGRLVFDSIVEK 380
A + G+ K + I L++ Y +CG G L FD +VE+
Sbjct: 559 ALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL-FDLLVEE 608
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 288/516 (55%), Gaps = 33/516 (6%)
Query: 221 VCNSLIT--LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD-LGEARRIFDEMP 277
+C+SL+T SLK + A ++ +++ ++L + + D L ARR+F P
Sbjct: 7 LCSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFP 66
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP-NTSCFSIVLSALASLKALRSGM 336
+ + +I +S P+ + F +M R P ++ F+ +L A AS ++L SG+
Sbjct: 67 NPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGI 126
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA------------- 383
+H + G++ +F+ L+ +YS+CG + VF+ + E +V
Sbjct: 127 QLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCG 186
Query: 384 ---------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
++ SWN M+ GY G++E A++LF MP ++DVSWS +I G+
Sbjct: 187 DVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAH 246
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ F F F E+ G PN+ + + L A A ++E GK LHG I K GF + V +
Sbjct: 247 NGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSV 306
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRGLAESGYAKESINLFEEMEKTS 547
AL DTY+K G++ +R VF+RMP+K I SWT M+ GLA GY +E+I LF EME++
Sbjct: 307 NNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESG 366
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
I P+ + +S+L+ACSH+GL++KG +YF M+ IYNI+P HY C+VD+ R+G+L +A
Sbjct: 367 IRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKA 426
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
+FI MP P + W +LL C + N ++AER + L +L + +VLLSNIYA A
Sbjct: 427 YEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVA 486
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
G+W D VR+ MT++ + K+ G S +EV ++ F
Sbjct: 487 GKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSF 522
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 179/384 (46%), Gaps = 37/384 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK S + G LH I G+ ++ T L+ MY A ++ +++ +
Sbjct: 112 LLKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPN 171
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V N ++ A + G+++ A +F+ MP RN SW +++G+ K G +E + F P
Sbjct: 172 VVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPV 231
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++ +SW+ I GF NGF +EA F +L + G++PNEV+ + ACA+ G +
Sbjct: 232 KDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKIL 291
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGD 265
G I K+GF VSV N+L+ K G V +AR VF+RM EKR +VSWT
Sbjct: 292 HGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWT----------- 340
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
MIA GY EEA +LF +M +P+ F +L A
Sbjct: 341 --------------------SMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYA 380
Query: 326 LASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV-A 383
+ + G + I IE + ++DLY + G+ ++ I+ V
Sbjct: 381 CSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKA---YEFIIHMPVLP 437
Query: 384 HVVSWNSMIGGYGLNGQMEEAKEL 407
+ W +++G ++G ++ A+ +
Sbjct: 438 TAIIWRTLLGACSIHGNVKLAERV 461
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 176/362 (48%), Gaps = 46/362 (12%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+F+ FE +V N+++T + G+V A +F+RM R++ SW V+L + + G+L A
Sbjct: 163 VFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELA 222
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R++F EMP +++VSWS MI + +G+ EAF FR++ + +PN + LSA A
Sbjct: 223 RKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADA 282
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
A+ G +H + K G V ++NAL+D YSKCG RLVF+ + EK +VSW
Sbjct: 283 GAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKR--SIVSWT 340
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SMI G ++G EEA +L F+EM SG P
Sbjct: 341 SMIAGLAMHGYGEEAIQL-------------------------------FHEMEESGIRP 369
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT----ALTDTYAKSGDIESS 505
+ F S+L A + +EKG + K+ + Y++ + D Y ++G ++ +
Sbjct: 370 DGIAFISILYACSHAGLIEKGYEYFYKMKDI---YNIEPAIEHYGCMVDLYGRAGQLDKA 426
Query: 506 RRVFDRMPD-KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN---ELTILSVLFA 561
MP I W ++ + G K + + E + + + PN + +LS ++A
Sbjct: 427 YEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERL--SELDPNNSGDHVLLSNIYA 484
Query: 562 CS 563
+
Sbjct: 485 VA 486
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 301/529 (56%), Gaps = 46/529 (8%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLGE 268
+F+ ++ V ++IT +K G ++ A+++FDR + ++VV+WT ++ ++ + E
Sbjct: 88 VFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEE 147
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
ARR+FD MP +N +SW+ MI Y + G+ ++A LF M + N ++ V++A
Sbjct: 148 ARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMP----ERNVVSWNTVITAFMQ 203
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ + + + E+DV ++ SK G D RL+FD + V +VVSW
Sbjct: 204 RRRVDEAQELFNRM----PERDVISWTTMVAGLSKNGRIDDARLLFDKM---PVRNVVSW 256
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKR-------------------------------NDV 417
N+MI GY N +++EA +LF+ MP+R N V
Sbjct: 257 NTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVV 316
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGK 476
+W+A+ISG+++ + + +F+EM + + PN+ TF SVL A + +A+L +G+ +H
Sbjct: 317 TWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQI 376
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD--RMPDKNEISWTVMVRGLAESGYAK 534
I K + + +AL + Y+K G++E +R++FD + ++ +SW M+ A G+
Sbjct: 377 ISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGH 436
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
++I+LF+EM+ P+ +T +++L ACSH+GLVD+GLK F ++ +IK H+TC+
Sbjct: 437 KAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCL 496
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
VD+ R+GRL EA DFI + +P ++ WA+LL+GC + + + + + L + E+
Sbjct: 497 VDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENA 556
Query: 655 AGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
Y++LSNIYAS G+W +A VR M +KGL+K GCSW+EV N VH F
Sbjct: 557 GTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVF 605
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 226/469 (48%), Gaps = 50/469 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++V +++ ++W +EEA+RLFD MP +N +SW +I G+ + G +++++ FE P
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMP 187
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV+SW I F+Q EA +LF ++ E V + + K I+D R
Sbjct: 188 ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKN-GRIDDAR---- 242
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
L+F ++V N++I + +D A +F++M +R++ SW ++ FI+ G
Sbjct: 243 ---LLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGK 299
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLS 324
L A F +M +N V+W+ +I+ + Q G EEA ++F +M + KPN F VL
Sbjct: 300 LERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLG 359
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD--SIVEKDV 382
A + L AL G +H + K ++ + +ALI++YSKCGE + R +FD SI +D
Sbjct: 360 ACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRD- 418
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAV 438
VVSWN MI Y +G +A LFD M + ++V++ A++S D +
Sbjct: 419 --VVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKL 476
Query: 439 FNEMLLSGEIPNKSTFSSVLC----------------------ASASV-ASLEKGKDLHG 475
F ++ I + + L SASV A+L G ++HG
Sbjct: 477 FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHG 536
Query: 476 KIIKLGFPYDVFLGT---------ALTDTYAKSGDIESSRRVFDRMPDK 515
I + L T L++ YA +G + V +M DK
Sbjct: 537 HIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDK 585
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 238/472 (50%), Gaps = 54/472 (11%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN-PFQNVISWTAAICGF 159
G + EA+++F+ MP+R+ VSWTA+I+G++K G +EE+ F+RN +NV++WTA + G+
Sbjct: 80 GKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGY 139
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
V+ EA +LF ++ N ++++++ + A L +F+ E++V
Sbjct: 140 VRWNRIEEARRLF----DAMPVKNVISWNTMIEGYARKGWIDQALD----LFEXMPERNV 191
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
N++IT ++ VD A+ +F+RM +RDV+SWT ++ + G + +AR +FD+MP R
Sbjct: 192 VSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVR 251
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP-NTSCFSIVLSA------------- 325
N VSW+ MI Y Q+ +EAF+LF QM NT + +
Sbjct: 252 NVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMS 311
Query: 326 ---LASLKALRSGMHVH----AHVLKIGIE----------KDVFIS--NALIDLYSKCGE 366
+ + A+ SG HV LKI E + F+S A L + C E
Sbjct: 312 NKNVVTWTAVISG-HVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALC-E 369
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN--MPKRNDVSWSAIIS 424
+ + V ++VA VVS ++I Y G++E A+++FD+ + R+ VSW+ +I+
Sbjct: 370 GQQIHQIISKTVYQEVADVVS--ALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIA 427
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK---LG 481
Y H ++F+EM G P+ T+ ++L A + +++G L +++ +
Sbjct: 428 AYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIK 487
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGY 532
D F T L D + ++G ++ + + K S W ++ G G+
Sbjct: 488 LREDHF--TCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGH 537
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 155/364 (42%), Gaps = 71/364 (19%)
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
L RY+F SI+ S ++ + + + + V +V SN LI
Sbjct: 21 LLSSFGRYAFLLCNLHNSILSSQFSTCQVVPK---ISSPVRDFSANSNVARSNWLITQLG 77
Query: 363 KCGETKDGRLVFDSIVEKDVA-----------------------------HVVSWNSMIG 393
K G+ + R VF+ + ++DV +VV+W +++
Sbjct: 78 KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVS 137
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
GY ++EEA+ LFD MP +N +SW+ +I GY D +F M P ++
Sbjct: 138 GYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXM------PERNV 191
Query: 454 FS--SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
S +V+ A +++ ++L ++ + DV T + +K+G I+ +R +FD+
Sbjct: 192 VSWNTVITAFMQRRRVDEAQELFNRMPE----RDVISWTTMVAGLSKNGRIDDARLLFDK 247
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEK-------TSIT--------------- 549
MP +N +SW M+ G A++ E+ LFE+M + T IT
Sbjct: 248 MPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFF 307
Query: 550 -----PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
N +T +V+ G ++ LK F+ M+ N+KPN + V+ S+ L
Sbjct: 308 YKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAAL 367
Query: 605 SEAE 608
E +
Sbjct: 368 CEGQ 371
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 50/248 (20%)
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
++V N +I G G++ EA+++F+ MP R+ VSW+A+I+GY++ + +F+
Sbjct: 64 SNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR- 122
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
+ I N T+ TAL Y + I
Sbjct: 123 --NDAIKNVVTW-----------------------------------TALVSGYVRWNRI 145
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFA 561
E +RR+FD MP KN ISW M+ G A G+ ++++LFE M E+ ++ N +V+ A
Sbjct: 146 EEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWN-----TVITA 200
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
VD+ + FN M P ++ +T +V LS++GR+ +A + MP +
Sbjct: 201 FMQRRRVDEAQELFNRM-PERDVIS----WTTMVAGLSKNGRIDDARLLFDKMPVR-NVV 254
Query: 622 AWASLLSG 629
+W +++ G
Sbjct: 255 SWNTMIIG 262
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 291/538 (54%), Gaps = 67/538 (12%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL+ + ++ G+KPN +T+ + AC+ + G + + G ++ V +SLIT
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ + G +G+AR++FDE+ +++ VSW+ M
Sbjct: 171 M-------------------------------YARCGKMGDARKVFDEISQKDLVSWNSM 199
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y++ + EA LFR+M F+PN VL A L L+ G V V++ +
Sbjct: 200 ISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKM 259
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ F+ +ALI +Y KCG+ + A+ +
Sbjct: 260 TLNYFMGSALIHMYGKCGD----------------------------------LVSARRI 285
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD+M K++ V+W+A+I+GY ++ + +F +M +S P++ T +L A AS+ +L
Sbjct: 286 FDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGAL 345
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+ GK + + GF DV++GTAL D YAK G ++++ RVF MP+KNE+SW M+ L
Sbjct: 346 DLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISAL 405
Query: 528 AESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
A G A+E++ LF+ M E +++PN++T + VL AC H+GLVD+G + F+ M + +
Sbjct: 406 AFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLV 465
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
P HY+C+VD+ SR+G L EA DF+ +MP +PD +LL C+ KN I+ER +K
Sbjct: 466 PKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKL 525
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L +L + YV+ S +YA+ RW D+ +R LM +KG+ K+ GCSW+++ +Q+H F
Sbjct: 526 LLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEF 583
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 202/419 (48%), Gaps = 45/419 (10%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
++ G + + G+ E VS +LI+ + + G++ ++ F+ ++++SW + I
Sbjct: 143 VENGRMGHCSVIRRGLDEDGHVS-HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMIS 201
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G+ + + EA+ LF +++E+G +PNE++ S+ AC E+ D +LG V + +
Sbjct: 202 GYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTL 261
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+ + ++LI + K G++ AR +FD M+K+D V+W
Sbjct: 262 NYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTW------------------------ 297
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+ MI Y Q+G EEA +LF+ M S P+ +LSA AS+ AL G
Sbjct: 298 -------NAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ 350
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
V + + G + DV++ AL+D+Y+KCG + VF + K+ VSWN+MI
Sbjct: 351 VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKN---EVSWNAMISALAF 407
Query: 398 NGQMEEAKELFDNMPKR------NDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPN 450
+GQ +EA LF +M ND+++ ++S + D +F+ M S G +P
Sbjct: 408 HGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPK 467
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+S ++ + LE+ D + + P +V LG AL K +I+ S RV
Sbjct: 468 IEHYSCMVDLFSRAGHLEEAWDFVMTMPEK--PDEVILG-ALLGACQKRKNIDISERVM 523
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 148/341 (43%), Gaps = 48/341 (14%)
Query: 31 ITSQNL--VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
I NL V GR H +I+ G+ ++ +++ L+ MY K +A ++ +++ DLV
Sbjct: 135 IACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLV 194
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPER----NEVS------------------W----- 121
N MI+ + + EA LF M E NE+S W
Sbjct: 195 SWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFV 254
Query: 122 ------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
+ALI + K G + + F+ ++ ++W A I G+ QNG S EA+
Sbjct: 255 VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAI 314
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
KLF + S P+++T I ACA I LG V + GF+ V V +L+ +
Sbjct: 315 KLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMY 374
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER------NEVS 283
K G +D A VF M ++ VSW ++ G EA +F M N+++
Sbjct: 375 AKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDIT 434
Query: 284 WSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVL 323
+ +++ +G +E RLF M + + P +S ++
Sbjct: 435 FVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMV 475
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 404 AKELFDNMPKRNDVSWSAIISGY-LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
A F N+ + S++ +I G + L ++ M G PN T+ + A +
Sbjct: 79 ASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACS 138
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
++ ++E G+ H +I+ G D + +L YA+ G + +R+VFD + K+ +SW
Sbjct: 139 NLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNS 198
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M+ G ++ +A E++ LF EM + PNE++++SVL AC G + G +
Sbjct: 199 MISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLG-TWVEEFVVEN 257
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
+ N + ++ M + G L A +SM + D W ++++G Y ++E A
Sbjct: 258 KMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK-KKDKVTWNAMITG---YAQNGMSEEA 313
Query: 643 VK 644
+K
Sbjct: 314 IK 315
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 283/530 (53%), Gaps = 45/530 (8%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDF-RLGLSVFGLIFKAGFEKHVSVCNSLI 226
A F +L SG P+ TF S+ K+ + + F R G V + G V V N+L+
Sbjct: 62 AFAAFSSILRSGDTPDRFTFPSLLKSASRLASFPRTGAQVHAQAVRRGLLVDVFVVNTLL 121
Query: 227 TLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+ + R VFD D+V+W +L +++ G++GEARR+F++MP+RN VSWS
Sbjct: 122 AMYAAFRDTRSMREVFDSCAGVADLVTWNTMLGGYVKCGEIGEARRVFEQMPQRNGVSWS 181
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
M+ Y +G + A +F +M
Sbjct: 182 AMVGAYAGAGELDVAREMFDEMP------------------------------------- 204
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
I ++V N++I +++ G R +FD E V ++VSWN+M+ GY +NG+M +A+
Sbjct: 205 AIGRNVVSWNSMITGFARHGLLPLARKMFD---EMPVRNLVSWNTMVRGYAVNGEMNDAR 261
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSVLCASASV 464
ELFD MP+++ VSW+ +ISGY + + + +F M S +PN+ T SVL A A +
Sbjct: 262 ELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACAHL 321
Query: 465 ASLEKGKDLHGKIIKLGFPYD--VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
+LE+G+ H I K D LG AL D Y+K G + + ++F + KN +W
Sbjct: 322 TALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSLDQKNVSAWNA 381
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
++ GLA +G + SI++FE+M ++ PN +T + VL AC+H GLVD+G + F SM
Sbjct: 382 LITGLAVNGDVRSSIDVFEQMRRSGEKPNGITFVGVLTACAHGGLVDEGRRCFQSMASTC 441
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERA 642
++P +HY C+VDML R+G L EAE+ I SMP PD +LL C+ +K +A R
Sbjct: 442 GVQPEAKHYGCMVDMLGRAGLLEEAEELIRSMPMVPDVMILGALLGACRMHKRVDVAARV 501
Query: 643 VKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
+ L+ + +VL+S+IYA+AG+W DA+ R ++ + G+ K G S
Sbjct: 502 QNEILGLSTQQSGCHVLISDIYAAAGKWADALYARGVLQKFGISKLRGSS 551
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 166/384 (43%), Gaps = 70/384 (18%)
Query: 66 YLGSRKSLEANEIVKDLN--GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
Y G+ + A E+ ++ G ++V N MI + G L A+++FD MP RN VSW
Sbjct: 187 YAGAGELDVAREMFDEMPAIGRNVVSWNSMITGFARHGLLPLARKMFDEMPVRNLVSWNT 246
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKP 182
++ G+ +G + ++ F+R P ++V+SWT I G+ Q E L+LF + ES V P
Sbjct: 247 MVRGYAVNGEMNDARELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLP 306
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLI--FKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
NEVT S+ ACA + G I K + ++ +LI + K G DLA
Sbjct: 307 NEVTMVSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVK 366
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+F +++++V +W ++ GD+ +
Sbjct: 367 IFHSLDQKNVSAWNALITGLAVNGDV-------------------------------RSS 395
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+F QM R KPN F VL+A A H ++ G + F S A
Sbjct: 396 IDVFEQMRRSGEKPNGITFVGVLTACA-----------HGGLVDEG--RRCFQSMA---- 438
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-W 419
S CG V+ + H + M+ G G +EEA+EL +MP DV
Sbjct: 439 -STCG------------VQPEAKH---YGCMVDMLGRAGLLEEAEELIRSMPMVPDVMIL 482
Query: 420 SAIISGYLEHKQFDLVFAVFNEML 443
A++ HK+ D+ V NE+L
Sbjct: 483 GALLGACRMHKRVDVAARVQNEIL 506
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 300/616 (48%), Gaps = 95/616 (15%)
Query: 41 RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQW 100
R +H +IKTG+H Y ++L + C+++ +
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKL--------------------------IEFCVLSPH--- 34
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
FDG+P V FE N++ W G
Sbjct: 35 ---------FDGLPYAISV---------------------FETIQEPNLLIWNTMFRGHA 64
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+ AL L++ ++ G+ PN TF + K+CA+ FR G + G + K G++ +
Sbjct: 65 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V SLI++ ++ G ++ AR VFD+ RDVVS+T ++ + G + A+++FDE+P ++
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 184
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
VSW+ MI+ Y ++G +EA LF+ M + + +P+ S V+SA A ++ G VH
Sbjct: 185 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 244
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
+ G ++ I NALIDLYSKCGE
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYSKCGE---------------------------------- 270
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+E A LF+ + ++ +SW+ +I GY + +F EML SGE PN T S+L A
Sbjct: 271 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 330
Query: 461 SASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + +++ G+ +H I K G L T+L D YAK GDIE++++VFD M ++
Sbjct: 331 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS 390
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
SW M+ G A G A + +LF +M K I P+++T + +L ACSHSG++D G F SM
Sbjct: 391 SWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSM 450
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
Y I P HY C++D+L G EA++ I +MP EPD W SLL CK + N ++
Sbjct: 451 SQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVEL 510
Query: 639 AERAVKNLWKLAEEHP 654
E +NL K+ E P
Sbjct: 511 GESYAQNLIKIEPETP 526
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 198/422 (46%), Gaps = 71/422 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK +G+ +HGH++K G + Y+ T L+ MY+ + + +A ++ + D
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+V + +I G +E AQ+LFD +P ++ VSW A+ISG+ + G +
Sbjct: 154 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK----------- 202
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
EAL+LF ++++ V+P+E T ++ ACA+ LG V
Sbjct: 203 --------------------EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 242
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
I GF ++ + N+LI L K GEV+ A +F+ + +DV+SW ++ + M
Sbjct: 243 HLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM--- 299
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
++ E A LF++M R PN +L A
Sbjct: 300 ----NLYKE------------------------ALLLFQEMLRSGESPNDVTMLSILPAC 331
Query: 327 ASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L A+ G +H ++ K G+ + +LID+Y+KCG+ + + VFDS++ + ++
Sbjct: 332 AHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS- 390
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFN 440
SWN+MI G+ ++G+ A +LF M K +D+++ ++S DL +F
Sbjct: 391 --SWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFR 448
Query: 441 EM 442
M
Sbjct: 449 SM 450
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 262/504 (51%), Gaps = 60/504 (11%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++FD++PE N W+ M Y+Q+ ++ LFRQM PN F ++L +
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK------------------------- 363
+ AL+ G VH V+K G + F++ LID+Y+
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAM 123
Query: 364 ------CGETKDGRLVFDSIVEKDVA----------------------------HVVSWN 389
C + R +FD E+D+ V+SWN
Sbjct: 124 INGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWN 183
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI- 448
+++ GY NG + + LF+ MP+RN SW+A+I GY + F V + F ML+ G +
Sbjct: 184 TVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVV 243
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN +T +VL A A + +L+ GK +H G+ +V++ AL D YAK G +E++ V
Sbjct: 244 PNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDV 303
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F M +K+ ISW ++ GLA G+ +++NLF M+ P+ +T + +L AC+H GLV
Sbjct: 304 FKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLV 363
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ G YF SM Y+I P HY C+VD+L R+G L+ A DFI MP E D+ WA+LL
Sbjct: 364 EDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLG 423
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ YKN ++AE A++ L + ++PA YV+LSNIY GRW D ++ M + G +K
Sbjct: 424 ACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKKL 483
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
GCS +EV + + F+ + +P+
Sbjct: 484 PGCSLIEVNDYLVEFYSLDERHPE 507
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 174/431 (40%), Gaps = 128/431 (29%)
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
+E A ++FD +PE N W A+ G+ QN
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYS-------------------------------QN 29
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
+ + LF ++ V PN TF I K+C +IN + G V + K+GF + V
Sbjct: 30 ESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINALKEGEEVHCFVIKSGFRANPFVA 89
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
+LI + G + A VF M +R+V++WT +++ +I DL ARR+FD PER+ V
Sbjct: 90 TTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPERDIV 149
Query: 283 SWSVMIARYNQS--------------------------GYPEEAF-----RLFRQMT-RY 310
W+ MI+ Y ++ GY RLF +M R
Sbjct: 150 LWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERN 209
Query: 311 SFKPNT--------SCFSIVLSAL-----------------------ASLKALRSGMHVH 339
F N CFS VLSA A L AL G VH
Sbjct: 210 VFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVH 269
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ G + +V++ NAL+D+Y+KCG + VF S+ KD ++SWN++IGG ++G
Sbjct: 270 VYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKD---LISWNTIIGGLAVHG 326
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+A LF +M ++GE P+ TF +LC
Sbjct: 327 HGADALNLFSHMK-------------------------------IAGENPDGITFIGILC 355
Query: 460 ASASVASLEKG 470
A + +E G
Sbjct: 356 ACTHMGLVEDG 366
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 180/412 (43%), Gaps = 47/412 (11%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK N + +G +H +IK+G ++ T L+ MY A + ++ +
Sbjct: 57 ILKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERN 116
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK---------------- 130
++ MIN I +L A+RLFD PER+ V W +ISG+++
Sbjct: 117 VIAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPN 176
Query: 131 ---------------HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+G V FE P +NV SW A I G+ +NG E L F ++
Sbjct: 177 KDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRM 236
Query: 176 LESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L G V PN+ T ++ ACA + LG V G++ +V V N+L+ + K G
Sbjct: 237 LVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGV 296
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE----VSWSVMIAR 290
V+ A VF M+ +D++SW I+ G +A +F M E +++ ++
Sbjct: 297 VETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCA 356
Query: 291 YNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHA--HVLKIGI 347
G E+ F F+ MT YS P + ++ L R+G+ HA + K+ I
Sbjct: 357 CTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLG-----RAGLLAHAVDFIRKMPI 411
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVE---KDVAHVVSWNSMIGGYG 396
E D I AL+ + L + ++E K+ A+ V +++ G +G
Sbjct: 412 EADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFG 463
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
ME A ++FD +P+ N W+A+ GY +++ V +F +M +PN TF +L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ +L++G+++H +IK GF + F+ T L D YA G I ++ RVF M ++N I+W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T M+ G + LF+ + I VL+ SG ++ K
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDI---------VLWNTMISGYIEA--KDVIRARE 169
Query: 581 IYNIKPNG--RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+++ PN + V++ + +G + E MP E + +W +L+ G
Sbjct: 170 LFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMP-ERNVFSWNALIGG 219
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 292/543 (53%), Gaps = 69/543 (12%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL L+ ++ SG+KP++ T++ + ACA++ + +G SV +FK G E+ V + +SLI
Sbjct: 112 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 171
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ K G+V G AR++FDE+ ER+ VSW+ M
Sbjct: 172 MYAKCGQV-------------------------------GYARKLFDEITERDTVSWNSM 200
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y+++GY ++A LFR+M F+P+ +L A + L LR+G + + I
Sbjct: 201 ISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKI 260
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
F+ + LI +Y KC G ++ A+ +
Sbjct: 261 GLSTFLGSKLISMYGKC----------------------------------GDLDSARRV 286
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F+ M K++ V+W+A+I+ Y ++ + F +F EM +G P+ T S+VL A SV +L
Sbjct: 287 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 346
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E GK + +L +++++ T L D Y K G +E + RVF+ MP KNE +W M+
Sbjct: 347 ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAY 406
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A G+AKE++ LF+ M S+ P+++T + VL AC H+GLV +G +YF+ M ++ + P
Sbjct: 407 AHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 463
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HYT ++D+LSR+G L EA +F+ P +PD A++L C K+ I E+A++ L
Sbjct: 464 IEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLM 523
Query: 648 KLAEEHPAG-YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
++ E AG YV+ SN+ A W ++ +R LM ++G+ K+ GCSW+E+ ++ F
Sbjct: 524 EMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 583
Query: 707 TDH 709
+D+
Sbjct: 584 SDY 586
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 197/396 (49%), Gaps = 37/396 (9%)
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI-ARYNQ 293
V+ R + +M V ++ +E+GD + +F E N S++ MI N
Sbjct: 46 VNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNT 105
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
E A L+R+M KP+ ++ V A A L+ + G VH+ + K+G+E+DV I
Sbjct: 106 WNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHI 165
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+++LI +Y+KCG+ GY A++LFD + +
Sbjct: 166 NHSLIMMYAKCGQV--------------------------GY--------ARKLFDEITE 191
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
R+ VSW+++ISGY E +F +M G P++ T S+L A + + L G+ L
Sbjct: 192 RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 251
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
I FLG+ L Y K GD++S+RRVF++M K+ ++WT M+ +++G +
Sbjct: 252 EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKS 311
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
E+ LF EMEKT ++P+ T+ +VL AC G ++ G K + +++ N T
Sbjct: 312 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNIYVATG 370
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+VDM + GR+ EA +MP + ++ W ++++
Sbjct: 371 LVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMITA 405
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 191/423 (45%), Gaps = 102/423 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR++H L K G+ ++ ++ L++MY +
Sbjct: 147 GRSVHSSLFKVGLERDVHINHSLIMMY-------------------------------AK 175
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + A++LFD + ER+ VSW ++IS G+
Sbjct: 176 CGQVGYARKLFDEITERDTVSWNSMIS-------------------------------GY 204
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG--LSVFGLIFKAGFEK 217
+ G++ +A+ LF K+ E G +P+E T S+ AC+ + D R G L + K G
Sbjct: 205 SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST 264
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+ + LI++ K G++D AR VF++M K+D V+WT ++ V+
Sbjct: 265 FLG--SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVY----------------- 305
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+Q+G EAF+LF +M + P+ S VLSA S+ AL G
Sbjct: 306 --------------SQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 351
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+ H ++ ++ +++++ L+D+Y KCG ++ VF+++ K+ A +WN+MI Y
Sbjct: 352 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA---TWNAMITAYAH 408
Query: 398 NGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEM-LLSGEIPNKSTFS 455
G +EA LFD M +D+++ ++S + F+EM + G +P ++
Sbjct: 409 QGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYT 468
Query: 456 SVL 458
+++
Sbjct: 469 NII 471
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 144/351 (41%), Gaps = 59/351 (16%)
Query: 52 IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF----DLVVHNCMINANIQWGNLEEAQ 107
I K+R T ++ +Y + KS EA ++ ++ D + +++A G LE +
Sbjct: 291 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 350
Query: 108 RLFDGMPE----RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
++ E N T L+ + K GRVEE++ FE P +N +W A I + G
Sbjct: 351 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 410
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ EAL LF ++ V P+++TF + AC GL+ + C
Sbjct: 411 HAKEALLLFDRM---SVPPSDITFIGVLSACVHA----------GLVHQG--------CR 449
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER-NEV 282
+S S+F + K + +T I+D+ G L EA + P + +E+
Sbjct: 450 YFHEMS----------SMFGLVPK--IEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 497
Query: 283 SWSVMIA---RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+ ++ + E+A R+ +M N + I + LA +K +
Sbjct: 498 MLAAILGACHKRKDVAIREKAMRMLMEMKE---AKNAGNYVISSNVLADMKMWDESAKMR 554
Query: 340 AHVLKIGIEKD-----VFISNALIDL-----YSKCGETKDGRLVFDSIVEK 380
A + G+ K + I L++ Y +CG G L FD +VE+
Sbjct: 555 ALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL-FDLLVEE 604
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 202/694 (29%), Positives = 347/694 (50%), Gaps = 80/694 (11%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R++F P + S+ ++ +T+ ++ + +L+ +I++ I + ++
Sbjct: 58 RNMFDEMPHRNIVSWTT----MVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLK 113
Query: 66 YLGSRKSLEANEIV-----KDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVS 120
G +++E ++V + D+V+ N +++ ++ G+L +AQR+F +P +N S
Sbjct: 114 ACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATS 173
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
W LI G+ K G ++++M F++ P +++SW + I G V N S AL+ + G+
Sbjct: 174 WNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNA-SSRALRFVSMMHGKGL 232
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K +E TF S+ KAC ++ LG + I K+GFE ++LI
Sbjct: 233 KMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALI-------------- 278
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS-----WSVMIARYNQSG 295
D++ L EA +IFD+ + VS W+ M++ + +G
Sbjct: 279 -----------------DMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNG 321
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
EA + M R + + FSIVL + L VH V+ G E D + +
Sbjct: 322 DYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGS 381
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
LID+Y+K G + +F+ + +KD VV+W+S+I G G +
Sbjct: 382 ILIDIYAKQGSINNALRLFERLPDKD---VVAWSSLITGCARFGSDK------------- 425
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
L F++F +M+ G + S VL A +S+AS + GK +H
Sbjct: 426 ------------------LAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHS 467
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
+K G+ + + TAL D YAK GDIE + +F + + + +SWT ++ G A++G A+E
Sbjct: 468 LCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEE 527
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
+I+L +M ++ PN++TIL VL AC HSGLV++ FNS+E + + P HY C+V
Sbjct: 528 AISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMV 587
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPA 655
D+L ++GR EA I+ MPF+PD W+SLL C TYKN +A ++L + E +
Sbjct: 588 DILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVS 647
Query: 656 GYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
Y++LSN+YA+ G W VR+ + + G +++G
Sbjct: 648 VYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAG 681
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 216/463 (46%), Gaps = 61/463 (13%)
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
+ C + S+ I K+GF H+ + N++I++ K + AR++FD M R++V
Sbjct: 11 RYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIV 70
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SWT ++ V S P EA L+ +M
Sbjct: 71 SWTTMVSVL-------------------------------TNSSMPHEALSLYNEMIESK 99
Query: 312 F-KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
+PN +S VL A ++ + G VH H+ + ++ D+ + NAL+D+Y KCG +D
Sbjct: 100 IEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDA 159
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+ VF I K+ SWN++I GY G +++A +LFD MP+ + VSW++II+G +++
Sbjct: 160 QRVFCEIPCKNAT---SWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNA 216
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
+ M G ++ TF SVL A L G+++H IIK GF + +
Sbjct: 217 S-SRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCIS 275
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEIS-----WTVMVRGLAESGYAKESINLFEEMEK 545
AL D Y+ + + ++FD+ + +S W M+ G +G E++++ M +
Sbjct: 276 ALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHR 335
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK----PNGRHYTCVV-----D 596
+ + + T VL C + F+++ + +G CVV D
Sbjct: 336 SGVRFDFYTFSIVLKICMN----------FDNLSLASQVHGFVITSGYELDCVVGSILID 385
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
+ ++ G ++ A +P + D AW+SL++GC + ++++A
Sbjct: 386 IYAKQGSINNALRLFERLP-DKDVVAWSSLITGCARFGSDKLA 427
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 17/238 (7%)
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVR 525
S++ K LH IIK GF +F+ + Y+K I +R +FD MP +N +SWT MV
Sbjct: 18 SIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVS 77
Query: 526 GLAESGYAKESINLFEEMEKTSI-TPNELTILSVLFACSHSGLVDKG-LKYFNSMEPIYN 583
L S E+++L+ EM ++ I PN+ +VL AC V+ G + +++ + +
Sbjct: 78 VLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLD 137
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ + ++DM + G L +A+ +P + ++ +W +L+ G Y + + + A+
Sbjct: 138 V--DIVLMNALLDMYVKCGSLRDAQRVFCEIPCK-NATSWNTLILG---YAKQGLIDDAM 191
Query: 644 KNLWKLAEEHPAGY-----VLLSNIYASAGRWIDAMNVRKL----MTEKGLRKSGGCS 692
K K+ E + L+ N + A R++ M+ + L T + K+ GCS
Sbjct: 192 KLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCS 249
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 294/582 (50%), Gaps = 38/582 (6%)
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ N S + + G L L+ L P+ T + ACA D G
Sbjct: 68 YPNAFSCNTLLKSALIGGMPHLCLPLYASL---PAPPDSYTHPILAAACASRKDVIEGRQ 124
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V GF ++ + N+LI + G + AR VFD D VSW IL ++ GD
Sbjct: 125 VHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAVSWNTILAAYVHAGD 184
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR---YSFKPNTSCFS-- 320
+ +A +F +MP+RN + S M++ + + G +EA R+F +++ SCF
Sbjct: 185 VDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFERN 244
Query: 321 --------------------------IVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS 354
V+SA A + +++G H V++ G+ V +
Sbjct: 245 DMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQ 304
Query: 355 NALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
NALI +YS C + R +FDS + SWNSMI GY NG +++A LF MP +
Sbjct: 305 NALIHMYSSCLDVFAARRLFDS---GECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNK 361
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
++VSWS +ISG +++ Q VF+ M G P++ T SV+ A ++++LEKGK +H
Sbjct: 362 DNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVH 421
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
I + + + LGT+L + Y K G +E++ F+ M +K W ++ GLA +G
Sbjct: 422 EYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVM 481
Query: 535 ESINLFEEMEKT-SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+S+++F EME + + TPNE+T VL AC H+GLVD+G +F M+ Y I PN RHY C
Sbjct: 482 KSLDMFSEMEASDTATPNEITFTGVLSACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGC 541
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+VD+L R+G + EAED I SMP PD AW +LL C + ++ ER + L H
Sbjct: 542 MVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGACWKHGEYEVGERVGRKLVNRDPLH 601
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
+LSNIYA G W ++R M ++ ++K G S V+
Sbjct: 602 DGFQTMLSNIYAKEGMWQSVDDLRGSMKQRHVQKVSGHSVVK 643
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 245/533 (45%), Gaps = 23/533 (4%)
Query: 13 PETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKS 72
P S+ I C S+ VI+GR +H H + G YL L+ MY
Sbjct: 100 PPDSYTHPILAAAC-----ASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCL 154
Query: 73 LEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG 132
+A + +D V N ++ A + G++++A +F MP+RN + ++++S F + G
Sbjct: 155 WDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRG 214
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
V+E+ F+ +++ +WTA I F +N EAL +F + +E S+
Sbjct: 215 MVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVS 274
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
ACA+ + G GL+ +AG V+V N+LI + +V AR +FD E D S
Sbjct: 275 ACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYS 334
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
W ++ +++ G + +A +F MP ++ VSWS +I+ Q+ +A +F M
Sbjct: 335 WNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGI 394
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
+P+ V+SA +L AL G VH ++ + + + +LI++Y KCG +
Sbjct: 395 RPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALE 454
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM-----PKRNDVSWSAIISGYL 427
F+ + EK WN++I G +NG + ++ ++F M N+++++ ++S
Sbjct: 455 AFNIMEEKGTP---CWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACR 511
Query: 428 EHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
D F M +I PN + ++ +++ +D+ I + DV
Sbjct: 512 HAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDM---IQSMPMSPDV 568
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEI--SWTVMVRGLAESGYAKESI 537
AL K G+ E RV ++ +++ + + M+ + YAKE +
Sbjct: 569 PAWGALLGACWKHGEYEVGERVGRKLVNRDPLHDGFQTMLSNI----YAKEGM 617
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 284/544 (52%), Gaps = 34/544 (6%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W I G Q+ +A+ + K G+ P+ +TF I KACA IN G + I
Sbjct: 55 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 114
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K G + V NSLI L + G+L AR
Sbjct: 115 KLGLLSDIFVSNSLIHL-------------------------------YAACGNLCYARS 143
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FDEM ++ VSW+ +I Y+Q ++ LF+ M K + V+SA L
Sbjct: 144 VFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGD 203
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
++ ++ IE DV++ N L+D + + G+ + VF ++ V ++V+ N+M
Sbjct: 204 YSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNM---KVRNIVTMNAM 260
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I Y + A+++FD +PK++ +SWS++ISGY + F +F +M + P+
Sbjct: 261 IAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDA 320
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
+SV+ + A + +L+ GK +H + + D + +L D Y K G + + +VF
Sbjct: 321 IVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKE 380
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
M +K+ +SW ++ GLA +G+ KES+NLF+ M PN +T L VL AC+++ LV++G
Sbjct: 381 MKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG 440
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
L +F SM+ +Y+++P +HY CVVD+L R+G+L +A FI MP +PD W LL C
Sbjct: 441 LDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCN 500
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
T+ + IAE K L +L + Y LLSN YASA RW +AMNVR+ M + +RKS GC
Sbjct: 501 THGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGC 560
Query: 692 SWVE 695
S VE
Sbjct: 561 SAVE 564
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 214/448 (47%), Gaps = 43/448 (9%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+LI + G + + F+ ++V+SW + ICG+ Q + L LF + GVK
Sbjct: 127 SLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKA 186
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
++VT + AC + D+ + + I E V + N+L+ + G++ A VF
Sbjct: 187 DKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVF 246
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
M+ R++V+ ++ + + D+ AR+IFD++P+++ +SWS MI+ Y+Q+ + +A
Sbjct: 247 FNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALE 306
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+FRQM R KP+ + V+S+ A L AL G VH +V + I+ D + N+LID+Y
Sbjct: 307 IFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYM 366
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG K+ VF + EKD +SWNS+I G NG +E+ L
Sbjct: 367 KCGSAKEALQVFKEMKEKD---TLSWNSIIIGLANNGFEKESLNL--------------- 408
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
F ML G PN TF VL A A+ +E+G D H + +K +
Sbjct: 409 ----------------FQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLD-HFESMKRLY 451
Query: 483 PYDVFLG--TALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESG---YAKES 536
+ + + D ++G +E + R MP D + + W +++ G A+
Sbjct: 452 SLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIV 511
Query: 537 INLFEEMEKTSITPNELTILSVLFACSH 564
E+E ++ T+LS +A +H
Sbjct: 512 TKKLNELEPSN--SGNYTLLSNAYASAH 537
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 185/372 (49%), Gaps = 19/372 (5%)
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
DL A ++FD++ W+++I QS P +A +++ P+ F +L
Sbjct: 36 DLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILK 95
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A + AL G +H H+ K+G+ D+F+SN+LI LY+ CG R VFD +V KD
Sbjct: 96 ACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKD--- 152
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYL---EHKQFDLVFA 437
VVSWNS+I GY + ++ LF M K + V+ ++S ++ D +
Sbjct: 153 VVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVR 212
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
+ + ++ +T + S EK + K+ ++ A+ YA
Sbjct: 213 YIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEK-VFFNMKV------RNIVTMNAMIAAYA 265
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K DI S+R++FD++P K+ ISW+ M+ G +++ + +++ +F +M++ + P+ + I S
Sbjct: 266 KGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIAS 325
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
V+ +C+H G +D G K+ + NIK + ++DM + G EA M E
Sbjct: 326 VVSSCAHLGALDLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMK-E 383
Query: 618 PDSNAWASLLSG 629
D+ +W S++ G
Sbjct: 384 KDTLSWNSIIIG 395
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 150/322 (46%), Gaps = 36/322 (11%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ + N +++ + G L+ A+++F M RN V+ A+I+ + K + + F++ P
Sbjct: 222 DVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIP 281
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+++ISW++ I G+ Q +AL++F ++ + VKP+ + +S+ +CA + LG
Sbjct: 282 KKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKW 341
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V + + + + NSLI + +K G A VF M+++D +SW
Sbjct: 342 VHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWN----------- 390
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
S++I N +G+ +E+ LF+ M F+PN F VL A
Sbjct: 391 -------------------SIIIGLAN-NGFEKESLNLFQAMLTEGFRPNGVTFLGVLIA 430
Query: 326 LASLKALRSGM-HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVA 383
A+ K + G+ H + +E + ++DL + G+ + R + + ++ D
Sbjct: 431 CANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPD-- 488
Query: 384 HVVSWNSMIGGYGLNGQMEEAK 405
V W ++G +G + A+
Sbjct: 489 -PVVWRILLGSCNTHGDVAIAE 509
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 302/600 (50%), Gaps = 73/600 (12%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
+AQ + G+ E N+ I+ + R+ + F++ P N +W A G++QNG
Sbjct: 32 QAQIVTHGL-EHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGH 90
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
+ + LF +L PN TF I K+C ++ R G V K GF+ + V S
Sbjct: 91 HRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATS 150
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
LI + K G V+ A VF M +R+VV WT I++ +I GD+ RR+FD PER+ V W
Sbjct: 151 LIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMW 210
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
SV+I+ Y +S A LF +M PN
Sbjct: 211 SVLISGYIESKNMAAARELFDKM------PN----------------------------- 235
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+D NA+++ Y+ GE + VFD + E++ V SWN +IGGY NG E
Sbjct: 236 ----RDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERN---VFSWNGLIGGYVKNGLFSET 288
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
E F M ++ G++ IPN T +VL A + +
Sbjct: 289 LESFKRM----------LVEGHV--------------------IPNDFTLVAVLSACSRL 318
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+L+ GK +H +G+ ++F+G L D YAK G IE++ VF+ + K+ ISW ++
Sbjct: 319 GALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTII 378
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
GLA G+A +++ +F+ M+ P+ +T + +L AC+H GLV G YF SM Y+I
Sbjct: 379 NGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSI 438
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P HY C+VD+L R+G L +A +FI MP EPD+ WA+LL C+ YKN +IAE A++
Sbjct: 439 VPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQ 498
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L +L +PA +V++SNIY GR D ++ M + G RK GCS +E + V F+
Sbjct: 499 RLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFY 558
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 142/279 (50%), Gaps = 9/279 (3%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+V+ + +I+ I+ N+ A+ LFD MP R+ +SW A+++G+ +G VE F+ P
Sbjct: 206 DVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMP 265
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRLGL 204
+NV SW I G+V+NG E L+ F ++L G V PN+ T ++ AC+ + +G
Sbjct: 266 ERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGK 325
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V G++ ++ V N LI + K G ++ A VF+ ++++D++SW I++ G
Sbjct: 326 WVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHG 385
Query: 265 DLGEARRIFDEMPERNE----VSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCF 319
+A +FD M E V++ +++ G ++ F F+ M YS P +
Sbjct: 386 HAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHY 445
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
++ L L ++ + K+ IE D I AL+
Sbjct: 446 GCMVDLLGRAGLLDQALNF---IRKMPIEPDAVIWAALL 481
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
S + E+ + +I+ G ++ F+ T ++ I +R++FD++P N +W
Sbjct: 21 SCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNA 80
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY 582
M RG ++G+ ++++ LF E+ + + PN T ++ +C V +G + + +
Sbjct: 81 MFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREG-EEVHCCATKH 139
Query: 583 NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
K N T ++DM S+ G + +A M E + W ++++G
Sbjct: 140 GFKSNSFVATSLIDMYSKKGCVEDAYKVFGEM-HERNVVVWTAIING 185
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 262/469 (55%), Gaps = 33/469 (7%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
MPERN VSW+ +IA Y+Q+G A + QM + P+ F ++ A +SL + G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV------------- 382
+HAHVLK + NALI +Y+K D VF + +D+
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 383 ------------------AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND-VSWSAII 423
+V+WN++I G+ G++ +A F+ M D VSW+AI+
Sbjct: 121 GYELEALCYFKEMLHQGRPDLVAWNAIIAGFAY-GELRDAIFFFEEMRCNADLVSWNAIL 179
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
+ + H Q + VF + M +S P+ T ++VL ASA S+E G +H +K G
Sbjct: 180 TACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLN 239
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
D + L D YAK G ++++ ++FD M + + +SW+ ++ G A+ GY +E++ LF+ M
Sbjct: 240 CDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTM 299
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
+ + PN +T + VL ACSH GLV++G K + +ME + I P H +C+VD+L+R+G
Sbjct: 300 RRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGC 359
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
L+EAE FI+ M F+PD W +LL+ CKT+ N + +RA +N+ K+ + A +VLL NI
Sbjct: 360 LNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNI 419
Query: 664 YASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
YAS G W D +R LM ++G+RK G SW+EV++++H FF + +P+
Sbjct: 420 YASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPE 468
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 211/480 (43%), Gaps = 110/480 (22%)
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +NV+SWT+ I G+ QNG AL+ + ++L+SGV P++ TF SI KAC+ + D LG
Sbjct: 2 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 61
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + K+ F H+ N+LI++ K + A VF RM RD++SW ++ F ++G
Sbjct: 62 QLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLG 121
Query: 265 DLGEARRIFDEMPERNE---VSWSVMIA-------------------------------- 289
EA F EM + V+W+ +IA
Sbjct: 122 YELEALCYFKEMLHQGRPDLVAWNAIIAGFAYGELRDAIFFFEEMRCNADLVSWNAILTA 181
Query: 290 --RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
R++Q+ EE FRL + M +P+ + VL A A ++ G VH + LK G+
Sbjct: 182 CMRHDQA---EEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGL 238
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D ++N LIDLY+KCG K +FDS++ D VVSW+S+I GY G EEA +L
Sbjct: 239 NCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPD---VVSWSSLILGYAQFGYGEEALKL 295
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
F M +R DV PN TF VL A + V +
Sbjct: 296 FKTM-RRLDVK------------------------------PNHVTFVGVLTACSHVGLV 324
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E+G L+G + + F P + S MV L
Sbjct: 325 EEGWKLYGTM----------------------------EKEFGIAPTREHCS--CMVDLL 354
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A +G E+ +M + P+ + ++L AC G VD G + + E I I P+
Sbjct: 355 ARAGCLNEAEGFIHQM---AFDPDIVVWKTLLAACKTHGNVDVGKR---AAENILKIDPS 408
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 173/408 (42%), Gaps = 56/408 (13%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F S I+ C +S + GR LH H++K+ L+ MY S ++A
Sbjct: 43 TFGSIIKAC-------SSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDA 95
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE---VSWTALISGFMKHG 132
++ + DL+ MI Q G EA F M + V+W A+I+GF +G
Sbjct: 96 LDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGRPDLVAWNAIIAGF-AYG 154
Query: 133 RVEESMWYFERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
+ +++++FE +++SW A + +++ + E +L + S +P+ +T +++
Sbjct: 155 ELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVL 214
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
A AE +G V K G SV N LI L K G + A +FD M DVV
Sbjct: 215 GASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVV 274
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW S +I Y Q GY EEA +LF+ M R
Sbjct: 275 SW-------------------------------SSLILGYAQFGYGEEALKLFKTMRRLD 303
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDG 370
KPN F VL+A + + + G ++ + K GI + ++DL ++ G +
Sbjct: 304 VKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEA 363
Query: 371 -----RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
++ FD +V W +++ +G ++ K +N+ K
Sbjct: 364 EGFIHQMAFDP-------DIVVWKTLLAACKTHGNVDVGKRAAENILK 404
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 213/742 (28%), Positives = 362/742 (48%), Gaps = 117/742 (15%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F+S +++C I +++ + G+ +H LI+ I + L L+ +Y S +A
Sbjct: 64 TFSSLLKSC------IRARHFRL-GKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKA 116
Query: 76 NEIVKDLNGF---DLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALI--- 125
++ + + F D+V + M+ G +A +LF E N+ +TA+I
Sbjct: 117 KDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRAC 176
Query: 126 --SGFMKHGRV--------------------------------EESMWYFERNPFQNVIS 151
S F+ GRV E + F++ NV++
Sbjct: 177 SNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT 236
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
WT I +Q GF EA++ FL ++ SG + ++ T SS+ ACAE+ + LG +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAI 296
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
++G V SL+ + K G + + R+
Sbjct: 297 RSGLADDVEC--SLVDMYAKCSAD----------------------------GSVDDCRK 326
Query: 272 IFDEMPERNEVSWSVMIARYNQS-GYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASL 329
+FD M + + +SW+ +I Y Q+ EA LF +M T+ +PN FS A ++
Sbjct: 327 VFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNV 386
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
R G V H K G+ + +SN++I ++ KC
Sbjct: 387 SDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCD------------------------ 422
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
+ME+A+ F+++ ++N VS++ + G + F+ F + +E+
Sbjct: 423 ----------RMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGV 472
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ TF+S+L A+V SL KG+ +H +++KLG + + AL Y+K G I+++ RVF
Sbjct: 473 SAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
M ++N ISWT M+ G A+ G+A+ + F +M K + PNE+T +++L ACSH GLV
Sbjct: 533 SLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVS 592
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+G ++FNSM + IKP HY C+VD+L R+G L++A +FIN+MPF+ D W + L
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 630 CKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSG 689
C+ + N ++ + A + + + PA Y+ LSNIYASAG+W ++ +R+ M E+ L K G
Sbjct: 653 CRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEG 712
Query: 690 GCSWVEVRNQVHFFFQKTDHNP 711
GCSW+EV ++VH F+ +P
Sbjct: 713 GCSWIEVGDKVHKFYVGDTSHP 734
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 179/400 (44%), Gaps = 76/400 (19%)
Query: 175 LLESGVKP-NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
+ G++P + VTFSS+ K+C FRLG V + + E + NSLI+L K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111
Query: 234 EVDLARSVFD---RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
++ A+ VF+ R KRDVVSW S M+A
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSW-------------------------------SAMMAC 140
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEK 349
+ +G +A +LF + PN C++ V+ A ++ + G + ++K G E
Sbjct: 141 FGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFES 200
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
DV + +LID++ K GE E A ++FD
Sbjct: 201 DVCVGCSLIDMFVK-GEN--------------------------------SFENAYKVFD 227
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M + N V+W+ +I+ ++ F +M+LSG +K T SSV A A + +L
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAK---SGDIESSRRVFDRMPDKNEISWTVMVRG 526
G+ LH I+ G DV +L D YAK G ++ R+VFDRM D + +SWT ++ G
Sbjct: 288 GRQLHSWAIRSGLADDV--ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITG 345
Query: 527 -LAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSH 564
+ A E+INLF EM + + PN T S AC +
Sbjct: 346 YMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 261/464 (56%), Gaps = 16/464 (3%)
Query: 265 DLGEARRIFDEMPERNEVSWSVMI-ARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIV 322
D+G A +FD++PERN +W+ +I A +A +F QM + + +PN F V
Sbjct: 64 DIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSV 123
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE--K 380
L A A + L G VH +LK G+ D F+ L+ +Y CG +D ++F VE
Sbjct: 124 LKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVD 183
Query: 381 DVAH-----------VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
DV + VV N M+ GY G ++ A+ELFD M +R+ VSW+ +ISGY ++
Sbjct: 184 DVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQN 243
Query: 430 KQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ +F+ M+ G++ PN+ T SVL A + + LE GK +H K D L
Sbjct: 244 GFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVL 303
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G+AL D YAK G IE + +VF+R+P N I+W ++ GLA G A + N MEK I
Sbjct: 304 GSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGI 363
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+P+++T +++L ACSH+GLVD+G +FN M +KP HY C+VD+L R+G L EAE
Sbjct: 364 SPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAE 423
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
+ I +MP +PD W +LL K +KN +I RA + L ++A YV LSN+YAS+G
Sbjct: 424 ELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSG 483
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
W VR +M + +RK GCSW+E+ +H F + D + +
Sbjct: 484 NWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSR 527
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 195/416 (46%), Gaps = 58/416 (13%)
Query: 141 FERNPFQNVISWTAAICGFVQ-NGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEIN 198
F++ P +N +W I + +AL +F ++L E+ V+PN+ TF S+ KACA +
Sbjct: 72 FDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMA 131
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF---------------- 242
G V GL+ K G V +L+ + + G ++ A +F
Sbjct: 132 RLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRD 191
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+R + +VV V++D + +G+L AR +FD M +R+ VSW+VMI+ Y Q+G+ +EA
Sbjct: 192 ERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIE 251
Query: 303 LFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F +M + PN VL A++ L L G VH + K I D + +AL+D+Y
Sbjct: 252 IFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMY 311
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDV 417
+KCG + VF+ + + + V++WN++IGG ++G+ + M K +DV
Sbjct: 312 AKCGSIEKAIQVFERLPQNN---VITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDV 368
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDL--- 473
++ AI+S D + FN+M+ S G P + ++ LE+ ++L
Sbjct: 369 TYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILN 428
Query: 474 ------------------HGKIIKLGF----------PYDVFLGTALTDTYAKSGD 501
K IK+G P+D AL++ YA SG+
Sbjct: 429 MPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGN 484
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 182/449 (40%), Gaps = 131/449 (29%)
Query: 10 SINP-ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLG 68
++ P + +F S ++ C + + + +G+ +HG L+K G+ + ++ T LL MY+
Sbjct: 112 TVEPNQFTFPSVLKACAVMAR-------LAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVM 164
Query: 69 SRKSLEAN--------------EIVKDLNG--FDLVVHNCMINANIQWGNLEEAQRLFDG 112
+AN +V+D G F++V+ N M++ + GNL+ A+ LFD
Sbjct: 165 CGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDR 224
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
M +R+ VSW +ISG + QNGF EA+++F
Sbjct: 225 MAQRSVVSWNVMISG-------------------------------YAQNGFYKEAIEIF 253
Query: 173 LKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
++++ G V PN VT S+ A + + LG V K + ++L+ + K
Sbjct: 254 HRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAK 313
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
G ++ A VF+R+ + +V++W ++ G L
Sbjct: 314 CGSIEKAIQVFERLPQNNVITWNAVI------GGLA------------------------ 343
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
G + F +M + P+ + +LSA + HA
Sbjct: 344 -MHGKANDIFNYLSRMEKCGISPSDVTYIAILSACS-----------HA----------- 380
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIV-----EKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
L+D +GR F+ +V + + H + M+ G G +EEA+E
Sbjct: 381 ----GLVD---------EGRSFFNDMVNSVGLKPKIEH---YGCMVDLLGRAGYLEEAEE 424
Query: 407 LFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
L NMP K +DV W A++ HK +
Sbjct: 425 LILNMPMKPDDVIWKALLGASKMHKNIKI 453
>gi|297826975|ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327209|gb|EFH57629.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/594 (31%), Positives = 319/594 (53%), Gaps = 56/594 (9%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI K G++ E+ F+ P ++V++WT I G+++ G EA +LF ++
Sbjct: 52 LIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRV-------- 103
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
D R K+V ++++ L+ ++ +A ++F
Sbjct: 104 ---------------DSR---------------KNVVTWTAMVSGYLRSKQLSVAETLFQ 133
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
M +R++VSW ++D + + G + +A +FDEMPERN VSW+ MI Q G +EA L
Sbjct: 134 EMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNL 193
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA--HVLKIGIEKDVFISNALIDLY 361
F +M V+S A + L V + E+++ NA+I Y
Sbjct: 194 FERMP----------IKDVISWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGY 243
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+ + +F + E+D A SWN+MI G+ N ++ A LFD MP++N +SW+A
Sbjct: 244 TYNNRIDEADQLFQVMPERDFA---SWNTMITGFIRNREINRACGLFDRMPQKNVISWTA 300
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+I+GY+E+K+ + VF++ML G + PN T+ S+L A + +A L +G+ +H I K
Sbjct: 301 MITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDR--MPDKNEISWTVMVRGLAESGYAKESIN 538
+ + +AL + Y+KSG++ ++R++FD + ++ ISW M+ A G+ KE+I
Sbjct: 361 VHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
++++M K P+E+T L++LFACSH+GLV+KG+++F + ++ HYTC+VD+
Sbjct: 421 MYDQMRKHGFKPSEVTYLNLLFACSHAGLVEKGMEFFKELVRDESLPLREEHYTCLVDLC 480
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
R+GRL + +FIN + + ++LS C + IA+ VK + + + YV
Sbjct: 481 GRAGRLKDVLNFINCDDARLSRSFYGAILSACNVHSEVSIAKEVVKKVLETGSDDAGTYV 540
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++SNIYA++G+ A +R M EKGL+K GCSWV++ NQ H F +P+
Sbjct: 541 MMSNIYAASGKREKAAEMRMKMKEKGLKKQPGCSWVKIGNQTHLFVVGDKSHPQ 594
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 185/357 (51%), Gaps = 45/357 (12%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T ++ YL S++ A + +++ ++V N MI+ Q G +++A LFD MPERN V
Sbjct: 113 TAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTV 172
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +I ++ GR++E+M FER P ++VISWTA + G +NG EA +LF
Sbjct: 173 SWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLF------- 225
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
C E+++ N++IT +D A
Sbjct: 226 -------------DCMP-------------------ERNIISWNAMITGYTYNNRIDEAD 253
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+F M +RD SW ++ FI ++ A +FD MP++N +SW+ MI Y ++ EE
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKENEE 313
Query: 300 AFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A ++F +M R KPN + +LSA + L L G +H + K +++ +++ALI
Sbjct: 314 ALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQENEVVTSALI 373
Query: 359 DLYSKCGETKDGRLVFDS--IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
++YSK GE R +FD+ + ++D ++SWNSMI Y +G +EA E++D M K
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRD---LISWNSMIAVYAHHGHGKEAIEMYDQMRK 427
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 290/538 (53%), Gaps = 67/538 (12%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL+ + ++ G+KPN +T+ + AC+ + G + + G ++ V +SLIT
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ + G +G+AR++FDE+ +++ VSW+ M
Sbjct: 171 M-------------------------------YARCGKMGDARKVFDEISQKDLVSWNSM 199
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I+ Y++ + EA LFR+M F+PN VL A L L+ G V V++ +
Sbjct: 200 ISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKM 259
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ F+ +ALI +Y KCG+ + A+ +
Sbjct: 260 TLNYFMGSALIHMYGKCGD----------------------------------LVSARRI 285
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD+M K++ V+W+A+I+GY ++ + +F +M +S P++ T +L A AS+ +L
Sbjct: 286 FDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGAL 345
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+ GK + + GF DV++GTAL D YAK G ++++ RVF MP KNE+SW M+ L
Sbjct: 346 DLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISAL 405
Query: 528 AESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
A G A+E++ LF+ M E +++PN++T + VL AC H+GLVD+G + F+ M + +
Sbjct: 406 AFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLV 465
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
P HY+C+VD+ SR+G L EA DF+ +MP +PD +LL C+ KN I+ER +K
Sbjct: 466 PKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKL 525
Query: 646 LWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L +L + YV+ S +YA+ RW D+ +R LM +KG+ K+ GCSW+++ +Q+H F
Sbjct: 526 LLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEF 583
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 203/419 (48%), Gaps = 45/419 (10%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
++ G + + G+ E VS +LI+ + + G++ ++ F+ ++++SW + I
Sbjct: 143 VENGRMGHCSVIRRGLDEDGHVS-HSLITMYARCGKMGDARKVFDEISQKDLVSWNSMIS 201
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G+ + + EA+ LF +++E+G +PNE++ S+ AC E+ D +LG V + +
Sbjct: 202 GYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTL 261
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+ + ++LI + K G++ AR +FD M+K+D V+W
Sbjct: 262 NYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTW------------------------ 297
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+ MI Y Q+G EEA +LF+ M S P+ +LSA AS+ AL G
Sbjct: 298 -------NAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ 350
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
V + + G + DV++ AL+D+Y+KCG + VF + +K+ VSWN+MI
Sbjct: 351 VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKN---EVSWNAMISALAF 407
Query: 398 NGQMEEAKELFDNMPKR------NDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPN 450
+GQ +EA LF +M ND+++ ++S + D +F+ M S G +P
Sbjct: 408 HGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPK 467
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+S ++ + LE+ D + + P +V LG AL K +I+ S RV
Sbjct: 468 IEHYSCMVDLFSRAGHLEEAWDFVMTMPEK--PDEVILG-ALLGACQKRKNIDISERVM 523
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 149/341 (43%), Gaps = 48/341 (14%)
Query: 31 ITSQNL--VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
I NL V GR H +I+ G+ ++ +++ L+ MY K +A ++ +++ DLV
Sbjct: 135 IACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLV 194
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPER----NEVS------------------W----- 121
N MI+ + + EA LF M E NE+S W
Sbjct: 195 SWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFV 254
Query: 122 ------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
+ALI + K G + + F+ ++ ++W A I G+ QNG S EA+
Sbjct: 255 VENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAI 314
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
KLF + S P+++T I ACA I LG V + GF+ V V +L+ +
Sbjct: 315 KLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMY 374
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER------NEVS 283
K G +D A VF M K++ VSW ++ G EA +F M N+++
Sbjct: 375 AKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDIT 434
Query: 284 WSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVL 323
+ +++ +G +E RLF M + + P +S ++
Sbjct: 435 FVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMV 475
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 16/247 (6%)
Query: 404 AKELFDNMPKRNDVSWSAIISGY-LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
A F N+ + S++ +I G + L ++ M G PN T+ + A +
Sbjct: 79 ASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACS 138
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
++ ++E G+ H +I+ G D + +L YA+ G + +R+VFD + K+ +SW
Sbjct: 139 NLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNS 198
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG--LKYF---NS 577
M+ G ++ +A E++ LF EM + PNE++++SVL AC G + G ++ F N
Sbjct: 199 MISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENK 258
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M Y + + ++ M + G L A +SM + D W ++++G Y
Sbjct: 259 MTLNYFMG------SALIHMYGKCGDLVSARRIFDSMK-KKDKVTWNAMITG---YAQNG 308
Query: 638 IAERAVK 644
++E A+K
Sbjct: 309 MSEEAIK 315
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 284/544 (52%), Gaps = 34/544 (6%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W I G Q+ +A+ + K G+ P+ +TF I KACA IN G + I
Sbjct: 520 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 579
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K G + V NSLI L + G+L AR
Sbjct: 580 KLGLLSDIFVSNSLIHL-------------------------------YAACGNLCYARS 608
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FDEM ++ VSW+ +I Y+Q ++ LF+ M K + V+SA L
Sbjct: 609 VFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGD 668
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
++ ++ IE DV++ N L+D + + G+ + VF ++ V ++V+ N+M
Sbjct: 669 YSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNM---KVRNIVTMNAM 725
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I Y + A+++FD +PK++ +SWS++ISGY + F +F +M + P+
Sbjct: 726 IAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDA 785
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
+SV+ + A + +L+ GK +H + + D + +L D Y K G + + +VF
Sbjct: 786 IVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKE 845
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
M +K+ +SW ++ GLA +G+ KES+NLF+ M PN +T L VL AC+++ LV++G
Sbjct: 846 MKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG 905
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
L +F SM+ +Y+++P +HY CVVD+L R+G+L +A FI MP +PD W LL C
Sbjct: 906 LDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCN 965
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
T+ + IAE K L +L + Y LLSN YASA RW +AMNVR+ M + +RKS GC
Sbjct: 966 THGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGC 1025
Query: 692 SWVE 695
S VE
Sbjct: 1026 SAVE 1029
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 240/421 (57%), Gaps = 9/421 (2%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++FD P W ++ Y+ +P++A +LFR R+ +T F+ L A A
Sbjct: 47 AHQVFDRRP----TPWHALLKAYSHGPHPQDALQLFRH-ARWHAADDTYAFTFALKACAG 101
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L R M +H V++ G E ++ AL+++Y CG D R+ F+ E V + VSW
Sbjct: 102 LGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFE---EMPVKNAVSW 158
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
N +I G+ G++E A+ LF+ MP RN VSWS +I GY + A+F M+ G
Sbjct: 159 NVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGIS 218
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P++ T +V+ A ++V + G+ LHG K G +DV +G +L D YAK G I++S RV
Sbjct: 219 PSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRV 278
Query: 509 FDRMPDK-NEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
FD M D+ N +SWT ++ G A G + +++ LF +M + I PN +T LSVL ACSH GL
Sbjct: 279 FDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGL 338
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
V++G+ +F SM YNI P+ +H+ C++DML R+GRL EAE I P E ++ W +LL
Sbjct: 339 VEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLL 398
Query: 628 SGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRK 687
C Y ++ ER +K + L E +V+LSN+ R+ DA VRKL+ ++ K
Sbjct: 399 GCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVK 458
Query: 688 S 688
S
Sbjct: 459 S 459
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/603 (26%), Positives = 270/603 (44%), Gaps = 83/603 (13%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F VH ++N I G L +++ F+ MP +N VSW +I+GF G VE + FER
Sbjct: 122 FQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYARLLFERM 181
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P +NV+SW+ I G+ + EA+ LF +++ G+ P+E+T ++ A + + +G
Sbjct: 182 PCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGE 241
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEM 263
++ G K G V V NSLI L K+G + + VFD M ++R++VSWT I+ F
Sbjct: 242 ALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMH 301
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSC 318
G +A +F +M N +++ ++ + G E+ F+ M Y+ P+
Sbjct: 302 GLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKH 361
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI- 377
F ++ L LR + + +E + + L+ SK GE + G I
Sbjct: 362 FGCIIDMLGRAGRLREAEQI---IRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKIL 418
Query: 378 -VEKDV-AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS---------------WS 420
+E++ V ++M+ E ++L D +RN V
Sbjct: 419 ALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVD---QRNSVKSFFNIVRMEAIKRLHAY 475
Query: 421 AIISG-----YLEHK--------QFDLVFA--VFNEM--------------LLSGEIPNK 451
I+SG Y K Q DLVFA VF+++ L + P
Sbjct: 476 YIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPAD 535
Query: 452 S-----------------TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+ TF +L A A + +L +G+ +H I KLG D+F+ +L
Sbjct: 536 AIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIH 595
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YA G++ +R VFD M K+ +SW ++ G ++ K+ + LF+ M+ + +++T
Sbjct: 596 LYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVT 655
Query: 555 ILSVLFACSHSG---LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
++ V+ AC+ G + D ++Y Y I+ + +VD R G+L AE
Sbjct: 656 MIKVVSACTRLGDYSMADYMVRYIED----YCIEVDVYLGNTLVDYFGRRGQLQSAEKVF 711
Query: 612 NSM 614
+M
Sbjct: 712 FNM 714
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/620 (24%), Positives = 281/620 (45%), Gaps = 88/620 (14%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPER-NEVSWTALISGFMKHGRVEESMWYF-- 141
+D+ V N +I+ + G+++ + R+FD M +R N VSWT++ISGF HG +++ F
Sbjct: 254 WDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFAD 313
Query: 142 --------ERNPFQNVISWTAAICGFVQNGFSF---------------------EALKLF 172
R F +V+ + G V+ G +F + L
Sbjct: 314 MRRAGIRPNRITFLSVLH-ACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRA 372
Query: 173 LKLLES-------GVKPNEVTFSSICKACAEINDFRLGLSVFG--LIFKAGFEKHVSVCN 223
+L E+ V+ N + ++ C++ + +G L + F V +
Sbjct: 373 GRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLS 432
Query: 224 SLITLSLKMGEVDLARSVFD------------RMEK-RDVVSWTVILDVF---------- 260
+++T + + ++ R + D RME + + ++ ++ ++
Sbjct: 433 NMLTELRRFSDAEIVRKLVDQRNSVKSFFNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVL 492
Query: 261 ----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
I DL A ++FD++ W+++I QS P +A +++ P+
Sbjct: 493 RSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDN 552
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F +L A A + AL G +H H+ K+G+ D+F+SN+LI LY+ CG R VFD
Sbjct: 553 LTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDE 612
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYL---EH 429
+V KD VVSWNS+I GY + ++ LF M K + V+ ++S ++
Sbjct: 613 MVVKD---VVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDY 669
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
D + + + ++ +T + S EK + K+ ++
Sbjct: 670 SMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEK-VFFNMKV------RNIVTM 722
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
A+ YAK DI S+R++FD++P K+ ISW+ M+ G +++ + +++ +F +M++ +
Sbjct: 723 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 782
Query: 550 PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
P+ + I SV+ +C+H G +D G K+ + NIK + ++DM + G EA
Sbjct: 783 PDAIVIASVVSSCAHLGALDLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQ 841
Query: 610 FINSMPFEPDSNAWASLLSG 629
M E D+ +W S++ G
Sbjct: 842 VFKEMK-EKDTLSWNSIIIG 860
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 207/430 (48%), Gaps = 43/430 (10%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ ++V+SW + ICG+ Q + L LF + GVK ++VT + AC + D+
Sbjct: 610 FDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDY 669
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+ + I E V + N+L+ + G++ A VF M+ R++V+ ++ +
Sbjct: 670 SMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAY 729
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+ D+ AR+IFD++P+++ +SWS MI+ Y+Q+ + +A +FRQM R KP+ +
Sbjct: 730 AKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIA 789
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+S+ A L AL G VH +V + I+ D + N+LID+Y KCG K+ VF + EK
Sbjct: 790 SVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEK 849
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D +SWNS+I G NG +E+ L F
Sbjct: 850 D---TLSWNSIIIGLANNGFEKESLNL-------------------------------FQ 875
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAK 498
ML G PN TF VL A A+ +E+G D H + +K + + + + D +
Sbjct: 876 AMLTEGFRPNGVTFLGVLIACANAKLVEEGLD-HFESMKRLYSLEPQMKHYGCVVDLLGR 934
Query: 499 SGDIESSRRVFDRMP-DKNEISWTVMVRGLAESG---YAKESINLFEEMEKTSITPNELT 554
+G +E + R MP D + + W +++ G A+ E+E ++ T
Sbjct: 935 AGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSN--SGNYT 992
Query: 555 ILSVLFACSH 564
+LS +A +H
Sbjct: 993 LLSNAYASAH 1002
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 183/393 (46%), Gaps = 40/393 (10%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+R P W A + + +AL+LF + + F+ KACA +
Sbjct: 51 FDRRP----TPWHALLKAYSHGPHPQDALQLF-RHARWHAADDTYAFTFALKACAGLGWP 105
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
R + + GL+ + GFE V +L+ + + G + +R F+ M ++ VSW V++ F
Sbjct: 106 RCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGF 165
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
G++ AR +F+ MP RN VSWS MI Y ++ P EA LFR+M P+
Sbjct: 166 AGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVL 225
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+ AL+++ + G +H + K G+ DV + N+LIDLY+K G ++ VFD ++++
Sbjct: 226 AVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDR 285
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
++VSW S+I G+ ++G +A ELF +M +
Sbjct: 286 R--NLVSWTSIISGFAMHGLSVKAVELFADMRR--------------------------- 316
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKS 499
+G PN+ TF SVL A + +E+G +I + DV + D ++
Sbjct: 317 ----AGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRA 372
Query: 500 GDIESSRRVFDRMP-DKNEISWTVMVRGLAESG 531
G + + ++ P + N W ++ ++ G
Sbjct: 373 GRLREAEQIIRDFPVEVNATVWRTLLGCCSKYG 405
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 150/322 (46%), Gaps = 36/322 (11%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ + N +++ + G L+ A+++F M RN V+ A+I+ + K + + F++ P
Sbjct: 687 DVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIP 746
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+++ISW++ I G+ Q +AL++F ++ + VKP+ + +S+ +CA + LG
Sbjct: 747 KKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKW 806
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V + + + + NSLI + +K G A VF M+++D +SW
Sbjct: 807 VHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWN----------- 855
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
S++I N +G+ +E+ LF+ M F+PN F VL A
Sbjct: 856 -------------------SIIIGLAN-NGFEKESLNLFQAMLTEGFRPNGVTFLGVLIA 895
Query: 326 LASLKALRSGM-HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVA 383
A+ K + G+ H + +E + ++DL + G+ + R + + ++ D
Sbjct: 896 CANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPD-- 953
Query: 384 HVVSWNSMIGGYGLNGQMEEAK 405
V W ++G +G + A+
Sbjct: 954 -PVVWRILLGSCNTHGDVAIAE 974
>gi|414589997|tpg|DAA40568.1| TPA: hypothetical protein ZEAMMB73_314346 [Zea mays]
Length = 627
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 319/618 (51%), Gaps = 46/618 (7%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G+ A+ +FD MP R+ V+W A+++ +++ G+ +++ F R P + S TAA+
Sbjct: 26 GDAASARAMFDAMPRRDAVAWNAMLTAYVRAGQPRDALTLFSRAPAPDAFSLTAALSAAA 85
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+L +L+ +AG +
Sbjct: 86 ALRSPVAGAQLHARLI-----------------------------------RAGLRALLP 110
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
V N+L+ + K D A F M +R+ +SW +L ++ L A+ +FD+MP RN
Sbjct: 111 VGNTLVDMYAKCARADDAARAFGEMRERNALSWCSLLHAYVVSDHLMLAQELFDQMPNRN 170
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
V+W+ ++ Y++SG + LF +M + + I+ A L +G +H
Sbjct: 171 NVAWNTLLMGYSRSGNANQCLLLFNKMRAEGMACDGATLCILADACTELAHPSAGSAIHK 230
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
++ G +SN+LI LYSK D +F+S+ +V +VSWNS+I Y G
Sbjct: 231 VAVQSGWSAMAEVSNSLISLYSKFSLLDDAVRIFESM---EVRTIVSWNSLIDSYMKLGC 287
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLC 459
+E+A LF +P+ N +SW+A+I G + D A+F ML I P+ TF SVL
Sbjct: 288 VEKATSLFRRVPETNVISWTAMIGGLARNGCADEALALFIVMLAHEHIHPDDFTFGSVLH 347
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
A A+ ASL G+ +H + + GF +++ +L D YAK GD+E VF + +K+ +S
Sbjct: 348 ACATAASLASGRMVHCRAFRSGFAAYLYVANSLMDMYAKCGDVEGGTNVFGAIVNKDLVS 407
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W M+ G A +G+A E++ +++ M+ + P+E+T +L AC+HSGL++ G +F SM
Sbjct: 408 WNTMLFGFAINGWANEALVVYDSMKSHEVCPDEVTFAGLLTACNHSGLLEHGESFFESMV 467
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAE---DFINSMPFEPDSNAWASLLSGCK-TYKN 635
++ I+P H +C++DM +RSG +++A D + +S+ +LLS C + N
Sbjct: 468 SVHGIQPKPEHLSCILDMYARSGNITKAMEMLDLYSETIRAHNSDIREALLSACSLEHLN 527
Query: 636 EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
++A +A++++ GYV+LSN++ +AG+W A VR M E G++K+ GCSW+E
Sbjct: 528 FRVARKAMEDMVATKSAGDVGYVMLSNLFCAAGQWNQAEQVRIAMAEHGIKKTPGCSWIE 587
Query: 696 VRNQVHFF---FQKTDHN 710
V+ V F Q DH+
Sbjct: 588 VQGAVKVFASGAQDLDHS 605
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 214/426 (50%), Gaps = 36/426 (8%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V N +++ + ++A R F M ERN +SW +L+ ++ + + F++ P
Sbjct: 109 LPVGNTLVDMYAKCARADDAARAFGEMRERNALSWCSLLHAYVVSDHLMLAQELFDQMPN 168
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N ++W + G+ ++G + + L LF K+ G+ + T + AC E+ G ++
Sbjct: 169 RNNVAWNTLLMGYSRSGNANQCLLLFNKMRAEGMACDGATLCILADACTELAHPSAGSAI 228
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ ++G+ V NSLI+L K +D A +F+ ME R +VSW ++D ++++G +
Sbjct: 229 HKVAVQSGWSAMAEVSNSLISLYSKFSLLDDAVRIFESMEVRTIVSWNSLIDSYMKLGCV 288
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSA 325
+A +F +PE N +SW+ MI ++G +EA LF M + P+ F VL A
Sbjct: 289 EKATSLFRRVPETNVISWTAMIGGLARNGCADEALALFIVMLAHEHIHPDDFTFGSVLHA 348
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A+ +L SG VH + G ++++N+L+D+Y+KCG+ + G VF +IV KD +
Sbjct: 349 CATAASLASGRMVHCRAFRSGFAAYLYVANSLMDMYAKCGDVEGGTNVFGAIVNKD---L 405
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWN+M+ G+ +NG EA ++D+M K ++V
Sbjct: 406 VSWNTMLFGFAINGWANEALVVYDSM-KSHEV---------------------------- 436
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIES 504
P++ TF+ +L A LE G+ ++ + G + + D YA+SG+I
Sbjct: 437 --CPDEVTFAGLLTACNHSGLLEHGESFFESMVSVHGIQPKPEHLSCILDMYARSGNITK 494
Query: 505 SRRVFD 510
+ + D
Sbjct: 495 AMEMLD 500
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 35/213 (16%)
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
A +V+ S I G G A+ +FD MP+R+ V+W+A+++ Y+ Q +F+
Sbjct: 9 AAGLVAATSRIASLGRAGDAASARAMFDAMPRRDAVAWNAMLTAYVRAGQPRDALTLFSR 68
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK--- 498
P+ + ++ L A+A++ S G LH ++I+ G + +G L D YAK
Sbjct: 69 ----APAPDAFSLTAALSAAAALRSPVAGAQLHARLIRAGLRALLPVGNTLVDMYAKCAR 124
Query: 499 ----------------------------SGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
S + ++ +FD+MP++N ++W ++ G + S
Sbjct: 125 ADDAARAFGEMRERNALSWCSLLHAYVVSDHLMLAQELFDQMPNRNNVAWNTLLMGYSRS 184
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACS 563
G A + + LF +M + + T+ + AC+
Sbjct: 185 GNANQCLLLFNKMRAEGMACDGATLCILADACT 217
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 264/450 (58%), Gaps = 6/450 (1%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
GD+ + R+F ++ SW+ +I Y+ S P ++ +F +M R P+ + ++
Sbjct: 62 GDINYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLV 121
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A A L +G+ VHAH++K G E D FI N+LI +Y+ CG + + VFDSI +K+V
Sbjct: 122 KASARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNV- 180
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSWNSM+ GY G+M A++ F++M +++ SWS++I GY++ ++ A+F +M
Sbjct: 181 --VSWNSMLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQ 238
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+G N+ T SV CA A + +LEKG+ ++ I+ G P + L T+L D YAK G IE
Sbjct: 239 SAGPKANEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
Query: 504 SSRRVFDRMP--DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ +F R+ + + W ++ GLA G +ES+ LF+EM+ I P+E+T L +L A
Sbjct: 299 EALLIFRRVSKSQTDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAA 358
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+H GLV + +F S+ + P HY C+VD+L+R+G+L+ A FI MP EP ++
Sbjct: 359 CAHGGLVKEAWFFFESLSKC-GMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTAS 417
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
+LLSGC ++N +AE + L +L H Y+ LSN+YA RW DA ++R+ M
Sbjct: 418 MLGALLSGCINHRNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAME 477
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+G++KS G S+VE+ +H F +P
Sbjct: 478 RRGVKKSPGFSFVEISGVLHRFIAHDKTHP 507
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 183/395 (46%), Gaps = 32/395 (8%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
+S S G + S F + + SW I G+ + ++L +FLK+L
Sbjct: 49 ISKILCFSALSNSGDINYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRL 108
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
GV P+ +T+ + KA A + + G+SV I K G E + NSLI + G A
Sbjct: 109 GVAPDYLTYPFLVKASARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWA 168
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
+ VFD +++++VVSW +LD + + G++ A++ F+ M E++ SWS +I Y ++G
Sbjct: 169 QKVFDSIQQKNVVSWNSMLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYS 228
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EA +F +M K N V A A + AL G ++ +++ G+ + + +L+
Sbjct: 229 EAMAIFEKMQSAGPKANEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLV 288
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+Y+KCG ++ L+F V K V+ WN++IGG +G +EE+ +L
Sbjct: 289 DMYAKCGAIEEALLIFRR-VSKSQTDVLIWNAVIGGLATHGLVEESLKL----------- 336
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
F EM + G P++ T+ +L A A +++ +
Sbjct: 337 --------------------FKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFFFESLS 376
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
K G + D A++G + ++ + +MP
Sbjct: 377 KCGMTPTSEHYACMVDVLARAGQLTTAYQFICQMP 411
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 175/384 (45%), Gaps = 46/384 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G ++H H+IKTG +R++ L+ MY
Sbjct: 133 GVSVHAHIIKTGHESDRFIQNSLIHMYAAC------------------------------ 162
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN AQ++FD + ++N VSW +++ G+ K G + + FE ++V SW++ I G+
Sbjct: 163 -GNSMWAQKVFDSIQQKNVVSWNSMLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGY 221
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
V+ G EA+ +F K+ +G K NEVT S+ ACA + G ++ I G +
Sbjct: 222 VKAGEYSEAMAIFEKMQSAGPKANEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTL 281
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKR--DVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+ SL+ + K G ++ A +F R+ K DV+ W ++ G + E+ ++F EM
Sbjct: 282 VLQTSLVDMYAKCGAIEEALLIFRRVSKSQTDVLIWNAVIGGLATHGLVEESLKLFKEMQ 341
Query: 278 ----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
+EV++ ++A G +EA+ F +++ P + ++ ++ LA L
Sbjct: 342 IVGICPDEVTYLCLLAACAHGGLVKEAWFFFESLSKCGMTPTSEHYACMVDVLARAGQLT 401
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD---GRLVFDSIVEKDVAHVVSWNS 390
+ + + ++ E + AL+ S C ++ +V ++E + H +
Sbjct: 402 TA---YQFICQMPTEPTASMLGALL---SGCINHRNLALAEIVGRKLIELEPNHDGRYIG 455
Query: 391 MIGGYGLNGQMEEAKELFDNMPKR 414
+ Y ++ + ++A+ + + M +R
Sbjct: 456 LSNMYAVDKRWDDARSMREAMERR 479
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 46/321 (14%)
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL---NGQMEEAKELFD 409
IS+ L+ L KC + + + ++ ++ + S I + +G + + +F
Sbjct: 13 ISHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFS 72
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
+ SW+ II GY K ++F +ML G P+ T+ ++ ASA + + E
Sbjct: 73 QLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQET 132
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
G +H IIK G D F+ +L YA G+ +++VFD + KN +SW M+ G A+
Sbjct: 133 GVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGYAK 192
Query: 530 --------------------------SGYAK-----ESINLFEEMEKTSITPNELTILSV 558
GY K E++ +FE+M+ NE+T++SV
Sbjct: 193 CGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVSV 252
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV-----VDMLSRSGRLSEA-EDFIN 612
AC+H G ++KG + I NG T V VDM ++ G + EA F
Sbjct: 253 SCACAHMGALEKGRMIYK------YIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRR 306
Query: 613 SMPFEPDSNAWASLLSGCKTY 633
+ D W +++ G T+
Sbjct: 307 VSKSQTDVLIWNAVIGGLATH 327
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 23/224 (10%)
Query: 471 KDLHGKIIKLGFPYD-VFLGTALT-DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K LH +I G D F+ L + SGDI S RVF ++ SW ++RG +
Sbjct: 31 KQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFSQLSSPTIFSWNTIIRGYS 90
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI---YNIK 585
S +S+++F +M + + P+ LT + LV + N + +I
Sbjct: 91 NSKNPIQSLSIFLKMLRLGVAPDYLT---------YPFLVKASARLLNQETGVSVHAHII 141
Query: 586 PNGRH-----YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
G ++ M + G A+ +S+ + + +W S+L G +A+
Sbjct: 142 KTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQ-QKNVVSWNSMLDGYAKCGEMVMAQ 200
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+A ++ ++E+ + L + Y AG + +AM + + M G
Sbjct: 201 KAFES---MSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAG 241
>gi|356561520|ref|XP_003549029.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Glycine max]
Length = 506
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 259/446 (58%), Gaps = 7/446 (1%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++F+EM + S + MI + + E+A LF +M +PN F ++++ A+
Sbjct: 34 ACQLFEEMSDLTVASATTMIQGFVKRHCHEDAIYLFSKMLASKIRPNEFTFGTLINSSAA 93
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH--VV 386
L + G +HA +KIG+ VF+ ++L+DLY K +D + F D H VV
Sbjct: 94 LGNVVVGKQLHACAMKIGLSCHVFVGSSLLDLYFKQSTIEDAQKAFG-----DTQHPNVV 148
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
S+ ++I GY G+ E+A +F MP+RN VSW+A++ G + + F ML G
Sbjct: 149 SYTTLICGYLKRGRFEDALRVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIGMLREG 208
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
IPN+STF V+CA+A++ASL GK H IK D F+G +L YAK G +E S
Sbjct: 209 FIPNESTFPCVICAAANIASLGIGKSFHACAIKFLGKVDQFVGNSLISFYAKCGSMEDSL 268
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+FD++ +N +SW M+ G A++G E+I+ FE M PN +T+L +L+AC+H+G
Sbjct: 269 LMFDKLFKRNIVSWNAMICGYAQNGRGAEAISFFERMCSEGYKPNYVTLLGLLWACNHAG 328
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
LVD+G YFN HY C+V++L+RSGR +EAEDF+ S+PF+P W +L
Sbjct: 329 LVDEGYSYFNRARLESPGLLKSEHYACMVNLLARSGRFAEAEDFLQSVPFDPGLGFWKAL 388
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L+GC+ + N ++ E A + + L + + YV+LSN +++AG+W D VR M EKG++
Sbjct: 389 LAGCQIHSNMRLGELAARKILDLDPDDVSSYVMLSNAHSAAGKWSDVATVRTEMKEKGMK 448
Query: 687 KSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ G SW+EVR +VH F ++ K
Sbjct: 449 RIPGSSWIEVRGEVHAFLTGDQNHDK 474
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 151/271 (55%), Gaps = 3/271 (1%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
FE V S T I GFV+ +A+ LF K+L S ++PNE TF ++ + A + +
Sbjct: 38 FEEMSDLTVASATTMIQGFVKRHCHEDAIYLFSKMLASKIRPNEFTFGTLINSSAALGNV 97
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G + K G HV V +SL+ L K ++ A+ F + +VVS+T ++ +
Sbjct: 98 VVGKQLHACAMKIGLSCHVFVGSSLLDLYFKQSTIEDAQKAFGDTQHPNVVSYTTLICGY 157
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
++ G +A R+F EMPERN VSW+ M+ +Q+G+ EEA F M R F PN S F
Sbjct: 158 LKRGRFEDALRVFHEMPERNVVSWNAMVGGCSQTGHNEEAVNFFIGMLREGFIPNESTFP 217
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
V+ A A++ +L G HA +K + D F+ N+LI Y+KCG +D L+FD + ++
Sbjct: 218 CVICAAANIASLGIGKSFHACAIKFLGKVDQFVGNSLISFYAKCGSMEDSLLMFDKLFKR 277
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ +VSWN+MI GY NG+ EA F+ M
Sbjct: 278 N---IVSWNAMICGYAQNGRGAEAISFFERM 305
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V+ G+ LH +K G+ ++ + LL +Y
Sbjct: 97 VVVGKQLHACAMKIGLSCHVFVGSSLLDLYF----------------------------- 127
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+ +E+AQ+ F N VS+T LI G++K GR E+++ F P +NV+SW A +
Sbjct: 128 --KQSTIEDAQKAFGDTQHPNVVSYTTLICGYLKRGRFEDALRVFHEMPERNVVSWNAMV 185
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G Q G + EA+ F+ +L G PNE TF + A A I +G S K +
Sbjct: 186 GGCSQTGHNEEAVNFFIGMLREGFIPNESTFPCVICAAANIASLGIGKSFHACAIKFLGK 245
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
V NSLI+ K G ++ + +FD++ KR++VSW ++ + + G EA F+ M
Sbjct: 246 VDQFVGNSLISFYAKCGSMEDSLLMFDKLFKRNIVSWNAMICGYAQNGRGAEAISFFERM 305
Query: 277 PER----NEVSWSVMIARYNQSGYPEEAFRLFRQ 306
N V+ ++ N +G +E + F +
Sbjct: 306 CSEGYKPNYVTLLGLLWACNHAGLVDEGYSYFNR 339
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 209/697 (29%), Positives = 329/697 (47%), Gaps = 135/697 (19%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
I+K DL N ++N +Q +L++A +LFD MP+ N +S+ L G+ + +
Sbjct: 60 HILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFH- 118
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+AL L++ + G + N F+++ K
Sbjct: 119 ------------------------------QALHFILRIFKEGHEVNPFVFTTLLKLLVS 148
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
++ L ++ ++K G V +LI G VD+AR VFD + +D+VSWT +
Sbjct: 149 MDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGM 208
Query: 257 LDVFIEMGDLGEARRIFDEM------PERNEVSWSV------------------------ 286
+ + E E+ ++F++M P +S ++
Sbjct: 209 VACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCY 268
Query: 287 ---------MIARYNQSGYPEEAFRLFRQM------------TRY--------------- 310
++ Y +SG +A RLF +M RY
Sbjct: 269 DHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLR 328
Query: 311 ----SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
S PN F+ VL A AS +L G +H+ VLK G+ +VF+SNA++D+Y+KCGE
Sbjct: 329 MRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGE 388
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
++ +F+ + +++ V+WN++I GY G E A LF +M
Sbjct: 389 IENSMKLFEELPDRN---DVTWNTIIVGYVQLGDGERAMNLFTHM--------------- 430
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
LEH P + T+SSVL ASAS+A+LE G +H IK + D
Sbjct: 431 LEHDM----------------QPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDT 474
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ +L D YAK G I +R FD+M ++E+SW M+ G + G + E++NLF+ M+ T
Sbjct: 475 VVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHT 534
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
PN+LT + VL ACS++GL+ KG +F SM Y+IKP HYTC+V +L R GR E
Sbjct: 535 DCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDE 594
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A I + ++P W +LL C +K + +++ ++ A +VLLSN+YA+
Sbjct: 595 AMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYAT 654
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
AGRW + VRK M +K +RK G SWVE + VH+F
Sbjct: 655 AGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYF 691
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 157/596 (26%), Positives = 244/596 (40%), Gaps = 140/596 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK + S +L LH + K G H + ++ T L+ Y A + D+ D
Sbjct: 142 LLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKD 201
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PERNEVSWT------------------ 122
+V M+ + EE+ +LF+ M P +S
Sbjct: 202 MVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHG 261
Query: 123 ---------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
AL+ + K G + ++ FE P ++I W+ I + Q+ S E
Sbjct: 262 CALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKE 321
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL LFL++ ++ V PN TF+S+ +ACA LG + + K G +V V N+
Sbjct: 322 ALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNA--- 378
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
I+DV+ + G++ + ++F+E+P+RN+V+W+ +
Sbjct: 379 ----------------------------IMDVYAKCGEIENSMKLFEELPDRNDVTWNTI 410
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
I Y Q G E A LF M + +P +S VL A ASL AL G+ +H+ +K
Sbjct: 411 IVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMY 470
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
KD ++N+LID+Y+KCG D RL FD + ++D VSWN+MI GY ++G EA L
Sbjct: 471 NKDTVVANSLIDMYAKCGRINDARLTFDKMNKRD---EVSWNAMICGYSMHGMSMEALNL 527
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD M + D PNK TF VL A ++ L
Sbjct: 528 FD-MMQHTDCK------------------------------PNKLTFVGVLSACSNAGLL 556
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
KG+ ES + +D P +T MV L
Sbjct: 557 YKGQ----------------------------AHFESMSKDYDIKPCIEH--YTCMVWLL 586
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG---LKYFNSMEP 580
G E++ L E+ + P+ + ++L AC VD G ++ MEP
Sbjct: 587 GRLGRFDEAMKLIGEI---AYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEP 639
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 48/301 (15%)
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
+G H+H H+LK G D+F N L++ Y + +D +FD
Sbjct: 53 AGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDE----------------- 95
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
MP+ N +S+ + GY QF + G N
Sbjct: 96 -----------------MPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFV 138
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
F+++L S+ LH + KLG D F+GTAL D Y+ G+++ +R VFD +
Sbjct: 139 FTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDIC 198
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
K+ +SWT MV AE+ + +ES+ LF +M PN TI L +C GL+
Sbjct: 199 CKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSC-------LGLE 251
Query: 574 YFNSMEPIYNIKPNGRHY------TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
FN + ++ G + ++++ ++SG + +A+ MP + D W+ ++
Sbjct: 252 AFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMI 310
Query: 628 S 628
+
Sbjct: 311 A 311
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 36/251 (14%)
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
GK LH I+K G D+F L + Y +S ++ + ++FD MP N IS+ + +G +
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 530 SGYAKESIN---------------LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKY 574
++++ +F + K ++ + + L AC +
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 575 FNSMEPIYNIKPN---GRHY---TCVVDMLSRSGRLS---------EAEDFINSMP---F 616
++ Y+++ N RH C DM+S +G ++ E+ N M +
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP--AGYVLLSNIYASAGRWIDAM 674
+P++ + L C + + + K +H G LL +YA +G IDA
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLE-LYAKSGEIIDAQ 292
Query: 675 NVRKLMTEKGL 685
+ + M + L
Sbjct: 293 RLFEEMPKTDL 303
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 303/560 (54%), Gaps = 42/560 (7%)
Query: 160 VQNGFSF-EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+ +G SF + L LF +L G+ P+ T + K+ + G V G KAG E
Sbjct: 21 LADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFD 80
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V NSL+ + +G++++ ++FDEMP+
Sbjct: 81 SYVSNSLMGMYASLGKIEITH-------------------------------KVFDEMPQ 109
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMH 337
R+ VSW+ +I+ Y +G E+A +F++M++ S K + LSA ++LK L G
Sbjct: 110 RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGER 169
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
++ V+ E V I NAL+D++ KCG R VFDS+ +K+V W SM+ GY
Sbjct: 170 IYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK---CWTSMVFGYVS 225
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
G+++EA+ LF+ P ++ V W+A+++GY++ +FD +F M +G P+ S+
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSL 285
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L A +LE+GK +HG I + D +GTAL D YAK G IE++ VF + +++
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDT 345
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
SWT ++ GLA +G + +++L+ EME + + +T ++VL AC+H G V +G K F+S
Sbjct: 346 ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHS 405
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN---AWASLLSGCKTYK 634
M +N++P H +C++D+L R+G L EAE+ I+ M E D + SLLS + Y
Sbjct: 406 MTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYG 465
Query: 635 NEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
N +IAER + L K+ + + LL+++YASA RW D NVR+ M + G+RK GCS +
Sbjct: 466 NVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSI 525
Query: 695 EVRNQVHFFFQKTD--HNPK 712
E+ H F D +PK
Sbjct: 526 EIDGVGHEFIVGDDLLSHPK 545
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 184/391 (47%), Gaps = 42/391 (10%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS-RKSLEANEI----VKD 81
+LK + + AL G L G++ + + T +++ +G RK +E ++ VK
Sbjct: 17 MLKSLADGKSFTKVLALFGELRGQGLYPDNF-TLPVVLKSIGRLRKVIEGEKVHGYAVKA 75
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF 141
FD V N ++ G +E ++FD MP+
Sbjct: 76 GLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQ-------------------------- 109
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDF 200
++V+SW I +V NG +A+ +F ++ ES +K +E T S AC+ + +
Sbjct: 110 -----RDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNL 164
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G ++ + FE V + N+L+ + K G +D AR+VFD M ++V WT ++ +
Sbjct: 165 EIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGY 223
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+ G + EAR +F+ P ++ V W+ M+ Y Q +EA LFR M +P+
Sbjct: 224 VSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLV 283
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
+L+ A AL G +H ++ + + D + AL+D+Y+KCG + VF I E+
Sbjct: 284 SLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER 343
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
D A SW S+I G +NG A +L+ M
Sbjct: 344 DTA---SWTSLIYGLAMNGMSGRALDLYYEM 371
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 127/244 (52%), Gaps = 5/244 (2%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
+ N +++ + G L++A+ +FD M ++N WT+++ G++ GR++E+ FER+P ++
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+ WTA + G+VQ EAL+LF + +G++P+ S+ CA+ G + G
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I + V +L+ + K G ++ A VF +++RD SWT ++ G G
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 269 ARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVL 323
A ++ EM + +++ ++ N G+ E ++F MT R++ +P + S ++
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 324 SALA 327
L
Sbjct: 424 DLLC 427
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 25/278 (8%)
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
++ ++ + K F V A+F E+ G P+ T VL + + + +G+ +HG +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
K G +D ++ +L YA G IE + +VFD MP ++ +SW ++ +G +++I
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 539 LFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIY-----NIKPNGRHYT 592
+F+ M +++++ +E TI+S L ACS LK E IY + + R
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACS-------ALKNLEIGERIYRFVVTEFEMSVRIGN 186
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
+VDM + G L +A +SM + + W S++ G +I E V L E
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFG--YVSTGRIDEARV-----LFER 238
Query: 653 HPAGYVLL----SNIYASAGRWIDAMNVRKLMTEKGLR 686
P V+L N Y R+ +A+ + + M G+R
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 41/251 (16%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D VV +++ + G +E A +F + ER+ SWT+LI
Sbjct: 313 DKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIY------------------- 353
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
G NG S AL L+ ++ GV+ + +TF ++ AC G
Sbjct: 354 ------------GLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 206 VF-GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD----VVSWTVILDVF 260
+F + + + C+ LI L + G +D A + D+M V + +L
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAA 461
Query: 261 IEMGDLGEARRIFDEMPERNEVSWS----VMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
G++ A R+ +++ E+ EVS S ++ + Y + E+ + R+M +
Sbjct: 462 RNYGNVKIAERVAEKL-EKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFP 520
Query: 317 SCFSIVLSALA 327
C SI + +
Sbjct: 521 GCSSIEIDGVG 531
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 299/554 (53%), Gaps = 40/554 (7%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W A I +AL LF +LE+GV ++ + S + KAC+ + + GL + G++
Sbjct: 93 WNAVIKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGLQIHGILR 152
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K G + + N LI L LK G LG AR+
Sbjct: 153 KTGLCSDLFLQNCLIGLYLKCG-------------------------------CLGFARQ 181
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
IFD MP+R+ VS++ MI Y + G E A LF M R N ++ ++S A
Sbjct: 182 IFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREV--KNLISWNSIISGYAQTS- 238
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
G+ + +++ EKD+ N++ID Y K G +D + +FD++ +DV V+W +M
Sbjct: 239 --DGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDV---VTWATM 293
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PN 450
I GY G + +AK LFD MP R+ VS++++++GY+++K +F++M + P+
Sbjct: 294 IDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPD 353
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
++T VL A A + L K D+H I++ F LG AL D Y+K G I+ + VF+
Sbjct: 354 ETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFE 413
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+ +K+ W M+ GLA G + + ++ ++E+ SI P+++T + VL ACSHSGLV +
Sbjct: 414 GIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKE 473
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
GL F M + I+P +HY C+VD+LSRSG + A++ I MP EP+ W + L+ C
Sbjct: 474 GLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPNDVIWRTFLTAC 533
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGG 690
+K + E K+L A +P+ YVLLSN+YAS G+W D +R +M E+ + K G
Sbjct: 534 NHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYASFGKWKDVRRIRTMMKERKIEKIPG 593
Query: 691 CSWVEVRNQVHFFF 704
CSW+E+ +VH FF
Sbjct: 594 CSWIELDGRVHEFF 607
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 85/444 (19%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL + NC+I ++ G L A+++FD MP+R+ VS+ ++I G++K G +E + F+ P
Sbjct: 159 DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMP 218
Query: 146 --FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
+N+ISW + I G+ Q G
Sbjct: 219 REVKNLISWNSIISGYAQTSD--------------------------------------G 240
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ + +F EK + NS+I +K G ++ A+ +FD M +RDVV+W ++D + ++
Sbjct: 241 VDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKL 300
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIV 322
G + +A+ +FD+MP R+ VS++ M+A Y Q+ Y EA +F M + S P+ + IV
Sbjct: 301 GFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIV 360
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISN----ALIDLYSKCGETKDGRLVFDSIV 378
LSA+A L L M +H ++ +EK F+ ALID+YSKCG + LVF+ I
Sbjct: 361 LSAIAQLGRLSKAMDMHLYI----VEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIE 416
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF-A 437
K + H WN+MIGG ++G E A ++ + +R+ K D+ F
Sbjct: 417 NKSIDH---WNAMIGGLAIHGLGESAFDMLLQIERRSI-------------KPDDITFVG 460
Query: 438 VFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
V N SG + +LC + + + ++ G + D +
Sbjct: 461 VLNACSHSGLVKE-----GLLCFEL----MRRKHKIEPRLQHYG---------CMVDILS 502
Query: 498 KSGDIESSRRVFDRMP-DKNEISW 520
+SG IE ++ + MP + N++ W
Sbjct: 503 RSGSIELAKNLIQEMPIEPNDVIW 526
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 178/407 (43%), Gaps = 82/407 (20%)
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
A+ + ++ DL+ N MI+ ++ G +E+A+ LFD MP R+ V+W +I G+ K G V
Sbjct: 244 ASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFV 303
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVTFSSICKA 193
++ F++ P ++V+S+ + + G+VQN + EAL++F + ES + P+E T + A
Sbjct: 304 HQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSA 363
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
A++ G + KA + H+ + L K+G
Sbjct: 364 IAQL----------GRLSKA-MDMHLYIVEKQFFLGGKLG-------------------- 392
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
++D++ + G + A +F+ + ++ W+ MI G E AF + Q+ R S K
Sbjct: 393 VALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIK 452
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+ F VL+A S G K+G L
Sbjct: 453 PDDITFVGVLNAC-----------------------------------SHSGLVKEGLLC 477
Query: 374 FDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYL 427
F+ + +E + H + M+ +G +E AK L MP + NDV W ++
Sbjct: 478 FELMRRKHKIEPRLQH---YGCMVDILSRSGSIELAKNLIQEMPIEPNDVIWRTFLTACN 534
Query: 428 EHKQFDLVFAVFNEMLL-SGEIPNKSTFSSVLCASASVASLEKGKDL 473
HK+F+ V ++L +G P SS + S AS K KD+
Sbjct: 535 HHKEFETGELVGKHLILQAGYNP-----SSYVLLSNMYASFGKWKDV 576
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 212/721 (29%), Positives = 348/721 (48%), Gaps = 106/721 (14%)
Query: 31 ITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVH 90
I S +L++ G+A+H L K G + + L+ +Y K +A + ++ + +
Sbjct: 89 IGSGDLML-GQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITW 147
Query: 91 NCMINANIQWGNLEEAQRLFDGM----PERNEVSW------------------------- 121
+I ++Q ++E R+ M E NE +
Sbjct: 148 TTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIK 207
Query: 122 ----------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
T+LIS + + G + + + +++V I + + G +A+ +
Sbjct: 208 RGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGV 267
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
FL LL SG++PN+ TF+++ AC D + + G+ K G +SV N++++
Sbjct: 268 FLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVS---- 323
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
V+++ G L EA + F M ERN VSW+ +++ Y
Sbjct: 324 ---------------------------VYVKHGMLEEAEKSFCGMGERNLVSWTALLSGY 356
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
++G ++A F Q+ ++ CF+ +L + K L G+ +H V+K+G DV
Sbjct: 357 VKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDV 416
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ ALIDLY+KC + + RLVF S+++K++
Sbjct: 417 SVGTALIDLYAKCRKLRSARLVFHSLLDKNI----------------------------- 447
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
VS++AI+SGY+ + D A+F+++ L+ P+ TF+ +L SA A L KGK
Sbjct: 448 -----VSFNAILSGYIGADEED-AMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGK 501
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
LH IIK GF + +G A+ YAK G I + ++F M + ISW ++ A G
Sbjct: 502 CLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHG 561
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
++++ LFEEM+K P+E+TILSVL ACS+SGL+++G FN ME Y IKP H+
Sbjct: 562 QGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHF 621
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
C+VD+L R+G LSEA FIN PF W +L+ CK + + + A K+L LA
Sbjct: 622 ACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAP 681
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
E Y+L+SN+YA G +A VR +M + + K G SW+E+ N+VH F +P
Sbjct: 682 EEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFVASDKDHP 741
Query: 712 K 712
+
Sbjct: 742 E 742
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 229/480 (47%), Gaps = 82/480 (17%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
R ++ + E FN + TC +L+ S +++G +HG +IK G ++ ++ T L+ M
Sbjct: 168 REMYWVGEE--FNEH--TCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISM 223
Query: 66 Y-----LGSRKSLEANEIVKDLNGFDLVVH-----NC----------MINANIQW----- 100
Y LG+ + + +N KD+ + ++ C ++ + ++
Sbjct: 224 YSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTF 283
Query: 101 --------GNLE-EAQRLFDGMPER----NEVS-WTALISGFMKHGRVEESMWYFERNPF 146
G+++ E R+ GM + +E+S A++S ++KHG +EE+ F
Sbjct: 284 TNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGE 343
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+N++SWTA + G+V+NG +AL+ F ++LE GV + F+++ C+E + LGL +
Sbjct: 344 RNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQI 403
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G + K G+ VSV +LI L K ++ AR VF + +++VS+ IL +I
Sbjct: 404 HGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGA--- 460
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
DE E+A LF Q+ KP++ F+ +LS
Sbjct: 461 -------DE----------------------EDAMALFSQLRLADIKPDSVTFARLLSLS 491
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A L G +HA+++K G E + + NA+I +Y+KCG D +F S+ D +
Sbjct: 492 ADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLD---SI 548
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV----FAVFNEM 442
SWN++I Y L+GQ +A LF+ M K V I L+ + + F +FN+M
Sbjct: 549 SWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDM 608
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
S + P + + +L S L G+ +H + KLG+ D F G L + Y K +
Sbjct: 72 SDQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGD 131
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS- 563
++ VFD M +N I+WT +++G + + + EM NE T +L AC
Sbjct: 132 AQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDS 191
Query: 564 ----------HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
H ++ +G E ++ T ++ M SR G L AE ++
Sbjct: 192 LENLVRGEQIHGFVIKRGFD-----EDVFV-------GTSLISMYSRCGDLGAAEKVYSN 239
Query: 614 MPFE 617
+ ++
Sbjct: 240 LAYK 243
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 199/640 (31%), Positives = 321/640 (50%), Gaps = 100/640 (15%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TAL++ + K GR++ +M F+ P +N ++WTA I G+ Q G + AL+LF ++ GV+
Sbjct: 176 TALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVR 235
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ +S AC+ + G + G ++ E SV N+LI L K + LAR
Sbjct: 236 PDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLAR-- 293
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
R+FD M RN VSW+ MIA Y Q+ EA
Sbjct: 294 -----------------------------RLFDSMENRNLVSWTTMIAGYMQNSLDTEAM 324
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFIS------- 354
+F Q+++ ++P+ + +L++ SL A+ G VHAHV+K +E D ++
Sbjct: 325 SMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMY 384
Query: 355 ------------------------NALIDLYSKCGET---------------KDGRLVFD 375
NA+I+ Y++ G+ K L F
Sbjct: 385 AKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFV 444
Query: 376 SIV-----------EKDVAHVV----------SWNSMIGGYGLNGQMEEAKELFDNMPKR 414
S++ K + ++ + +++I Y +++AK +F M R
Sbjct: 445 SLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNR 504
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
+ V W+A+I G ++++ + +F + +SG PN+ TF +++ ++++AS+ G+ H
Sbjct: 505 DMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFH 564
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
+IIK G D + AL D YAK G IE R +F+ K+ I W M+ A+ G+A+
Sbjct: 565 AQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAE 624
Query: 535 ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV 594
E++++F ME + PN +T +SVL AC+H+GLVD+GL +FNSM+ Y ++P HY V
Sbjct: 625 EALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASV 684
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
V++ RSG+L A++FI MP EP + W SLLS C + N +I A + + LA+
Sbjct: 685 VNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATE-MALLADPAD 743
Query: 655 AG-YVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
+G VL+SNIYAS G W DA +R+ M G+ K G SW
Sbjct: 744 SGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 207/474 (43%), Gaps = 90/474 (18%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DL + N ++ + G L +A+RLFD MP RN VSW + IS + +HGR ++++ F P
Sbjct: 64 DLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFP 123
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
S G PNE +S +ACA+ R G
Sbjct: 124 SAGAAS-------------------------PDGEPPNEFLLASALRACAQSRAARFGEQ 158
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V G+ K G + +V V +L+ L K G +D A SVFD + R+ V+WT +
Sbjct: 159 VHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAV--------- 209
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
I Y+Q+G A LF +M +P+ + SA
Sbjct: 210 ----------------------ITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASA 247
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L + G +H + + E D + NALIDLY KC R +FDS+ ++ +
Sbjct: 248 CSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRN---L 304
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW +MI GY N EA +F W ++ +
Sbjct: 305 VSWTTMIAGYMQNSLDTEAMSMF----------W---------------------QLSQA 333
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G P+ +S+L + S+A++ +G+ +H +IK D ++ AL D YAK + +
Sbjct: 334 GWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEA 393
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
R VF+ + + + IS+ M+ G A G ++ +F +M S+ P+ LT +S+L
Sbjct: 394 RAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLL 447
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 195/422 (46%), Gaps = 52/422 (12%)
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI---------EMGDLGEARRIF 273
SL L L D R V R VVS ++ D+F+ ++G LG+ARR+F
Sbjct: 30 GSLAQLLLSCLAGDRLRRVLPPAHARAVVS-GLLPDLFLANLLLRGYSKLGRLGDARRLF 88
Query: 274 DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK------PNTSCFSIVLSALA 327
D MP RN VSW I+ Y Q G ++A LF PN + L A A
Sbjct: 89 DSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACA 148
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
+A R G VH K+G++ +VF+ AL++LY+K G
Sbjct: 149 QSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAG---------------------- 186
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+++ A +FD +P RN V+W+A+I+GY + Q + +F M L G
Sbjct: 187 ------------RIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGV 234
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
P++ +S A + + +E G+ +HG + D + AL D Y K + +RR
Sbjct: 235 RPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARR 294
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGL 567
+FD M ++N +SWT M+ G ++ E++++F ++ + P+ S+L +C
Sbjct: 295 LFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAA 354
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
+ +G + ++ +++ + ++DM ++ L+EA ++ E D+ ++ +++
Sbjct: 355 IWQG-RQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALA-EDDAISYNAMI 412
Query: 628 SG 629
G
Sbjct: 413 EG 414
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
S ++LS LA + R HA + G+ D+F++N L+ YSK G D
Sbjct: 31 SLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGD------- 83
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD--- 433
A+ LFD+MP RN VSW + IS Y +H + D
Sbjct: 84 ---------------------------ARRLFDSMPSRNLVSWGSAISMYAQHGREDDAL 116
Query: 434 LVFAVFNEMLLS---GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
L+FA F + GE PN+ +S L A A + G+ +HG KLG +VF+GT
Sbjct: 117 LLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGT 176
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL + YAK+G I+++ VFD +P +N ++WT ++ G +++G A ++ LF M + P
Sbjct: 177 ALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRP 236
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+ + S ACS G V+ G + + + + ++D+ + RL A
Sbjct: 237 DRFVLASAASACSGLGFVEGG-RQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRL 295
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+SM + +W ++++G Y + A+ W+L++
Sbjct: 296 FDSME-NRNLVSWTTMIAG---YMQNSLDTEAMSMFWQLSQ 332
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 186/452 (41%), Gaps = 53/452 (11%)
Query: 7 SLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMY 66
S+F + + + C +L S + QGR +H H+IK + + Y+ L+ MY
Sbjct: 325 SMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMY 384
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM------------- 113
EA + + L D + +N MI + G+L A +F M
Sbjct: 385 AKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFV 444
Query: 114 ------PERNEV--------------------SWTALISGFMKHGRVEESMWYFERNPFQ 147
R+++ + +ALI + K V+++ F +
Sbjct: 445 SLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNR 504
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+++ W A I G QN EA+KLF +L SG+ PNE TF ++ + + G
Sbjct: 505 DMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFH 564
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
I KAG + + N+LI + K G ++ R +F+ +DV+ W ++ + + G
Sbjct: 565 AQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAE 624
Query: 268 EARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIV 322
EA +F M E N V++ +++ +G +E F M T+Y+ +P T ++ V
Sbjct: 625 EALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASV 684
Query: 323 LSALASLKALRSGMHVHAH---VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
++ RSG +HA + ++ IE I +L+ G + GR + +
Sbjct: 685 VNLFG-----RSG-KLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALL 738
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
D A M Y G +A++L M
Sbjct: 739 ADPADSGPSVLMSNIYASKGLWADAQKLRQGM 770
>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 760
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 212/718 (29%), Positives = 339/718 (47%), Gaps = 140/718 (19%)
Query: 34 QNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCM 93
Q+ VI G HG +KTG+ K ++ LL MY GF M
Sbjct: 138 QDGVI-GMRCHGVAVKTGLDKNIFVGNALLSMYAKC--------------GF-------M 175
Query: 94 INANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWT 153
++ + R+F+ + E NEVS+T +ISG + +V
Sbjct: 176 VDYGV---------RVFESLSEPNEVSFTTVISGLARENKV------------------- 207
Query: 154 AAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI---------CKACAEINDFRLGL 204
EA+ +F + E GV+ + V S+I C + +EI LG
Sbjct: 208 ------------LEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGK 255
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV--------- 255
+ L + GF + + NSL+ + K +++ A +F M + +VVSW +
Sbjct: 256 QIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEY 315
Query: 256 --------------------------ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
IL GD+ RRIF+ +P+ + +W+ M++
Sbjct: 316 RSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIPQPSVSAWNAMLS 375
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y+ + EEA FRQM + KP+ + S++LS+ A L+ L G +H ++ +
Sbjct: 376 GYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSE 435
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIV-EKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D I + LI +YS+C + + +FD + E D+A WNSMI G N +A LF
Sbjct: 436 DSHIVSGLIAVYSECEKMEICECIFDDCINELDIA---CWNSMISGLRRNTLDTKALMLF 492
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
M + + + +PN++T++ VL + + + SL
Sbjct: 493 RRMHQTSVL------------------------------LPNETTYAIVLGSCSRLCSLV 522
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
G+ HG+++K G+ D F+ TA+TD Y K G+IES+R+ FD + KN + W M+ G A
Sbjct: 523 HGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHGYA 582
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
+G E+++L+ EM P+ +T +SVL ACSHSGLVD GL+ +SM+ + I+P
Sbjct: 583 HNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEPEL 642
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
HY C+VD L R+GRL +AE + P++ S W LLS C+ Y + +A R + L
Sbjct: 643 DHYICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILLSSCRVYGDVSLARRVAEKLMH 702
Query: 649 LAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
L ++ A YVLLSN Y+S +W DA +++LM + + K+ G SW+ N + F+K
Sbjct: 703 LDPQNSAAYVLLSNTYSSVRQWDDAAALQELMNKNRVHKTPGHSWITYGNDLDSGFRK 760
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/630 (24%), Positives = 291/630 (46%), Gaps = 86/630 (13%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D + N +++ I++G+ + A++LFD M R+ SW A ++ K G +EE+ F+ P
Sbjct: 26 DTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACEVFDGMP 85
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V+SW I V+ GF +AL ++ +++ G P+ T +S+ AC+++ D +G+
Sbjct: 86 ERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQDGVIGMR 145
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
G+ K G +K++ V N+L+++ K G M D
Sbjct: 146 CHGVAVKTGLDKNIFVGNALLSMYAKCG----------------------------FMVD 177
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS- 324
G R+F+ + E NEVS++ +I+ + EA +FR M + + C S +LS
Sbjct: 178 YGV--RVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSI 235
Query: 325 --------ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+L+ + G +H+ L+ G ++ ++N+L+++Y+K + L+F
Sbjct: 236 SVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTE 295
Query: 377 IVEKDVAHVVSWNSMIGGYGL-----------------------------------NGQM 401
+ E +VVSWN MI G+G +G +
Sbjct: 296 MPE---VNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDV 352
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
E + +F+ +P+ + +W+A++SGY ++ ++ F +M P+++T S +L +
Sbjct: 353 ETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSC 412
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-W 520
A + LE GK +HG I+ D + + L Y++ +E +FD ++ +I+ W
Sbjct: 413 ARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACW 472
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSI-TPNELTILSVLFACSHSGLVDKGLKYFNSME 579
M+ GL + +++ LF M +TS+ PNE T VL +CS + G ++ +
Sbjct: 473 NSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHGQVV 532
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
+ + T V DM + G + A F +++ ++ W ++ G Y +
Sbjct: 533 KSGYVSDSFVE-TAVTDMYCKCGEIESARQFFDTVS-RKNTVIWNEMIHG---YAHNGRG 587
Query: 640 ERAVKNLWKL--AEEHPAGYVLLSNIYASA 667
+ AV ++ A E P G +S + A +
Sbjct: 588 DEAVDLYREMISAGEKPDGITFVSVLTACS 617
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 213/427 (49%), Gaps = 42/427 (9%)
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ G +CN L+ L ++ G+ D AR +FD M RDV SW L ++GDL EA
Sbjct: 20 RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACE 79
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FD MPER+ VSW+ MI+ + G+ E+A ++ +M F P+ + VLSA + ++
Sbjct: 80 VFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQD 139
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD-GRLVFDSIVEKDVAHVVSWNS 390
GM H +K G++K++F+ NAL+ +Y+KCG D G VF+S+ E + VS+ +
Sbjct: 140 GVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPN---EVSFTT 196
Query: 391 MIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+I G ++ EA +F M ++ + V S I+S + + D + ++ +L
Sbjct: 197 VISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVL--- 253
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
GK +H ++ GF ++ L +L + YAK+ D+ +
Sbjct: 254 -----------------------GKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAE 290
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+F MP+ N +SW +M+ G + + +SI + M + PNE+T +S+L AC SG
Sbjct: 291 LIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSG 350
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAW 623
V+ G + FN++ +P+ + ++ S EA + M F+ PD
Sbjct: 351 DVETGRRIFNTIP-----QPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTL 405
Query: 624 ASLLSGC 630
+ +LS C
Sbjct: 406 SVILSSC 412
>gi|326520249|dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 300/536 (55%), Gaps = 19/536 (3%)
Query: 183 NEVTFSSICKACAEINDFR-LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
N T + + + D R LG + L+ K H + N LI L + +R+
Sbjct: 30 NVATVLHLIERAISLGDVRYLGRAAHALLLKTALNHHTLLSNRLIELYAMLNSPAASRTA 89
Query: 242 FDRMEKRDVVSWTVILDVFIE-MGDLGEARRIFDEMP--ERNEVSWSVMIARYNQSGYPE 298
F+ + R+ S+ +L L +A + D MP RN VS++ +I+ ++G
Sbjct: 90 FEDLPYRNAHSYNNLLAALSRGSATLPDALHLLDAMPASSRNVVSYNTIISALARNGRQG 149
Query: 299 EAFRLFRQMTR-YSFKPNTSC--FSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
EA R+F ++ R P + F++V SA A + ALR +H V+ G+E V +
Sbjct: 150 EALRVFARLARDRCLGPEVALDRFAVVSVASACAGMGALRPLREMHGAVVVSGVEVTVIM 209
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+NA++D YSK G +D R +F+ + +D VSW SMI GY +++EA +F MP+
Sbjct: 210 ANAMVDAYSKAGRMEDARTLFNQMSIQDT---VSWTSMIAGYCRAKRLDEAIRVFHMMPE 266
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
++ ++W+A+ISG+ ++ + D +F +ML+ G P S L A A + + +G+++
Sbjct: 267 QDTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLGACAKLGLVTRGREV 326
Query: 474 HGKIIK--LGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
HG I++ +G P+++F+ AL D Y+K GD+ ++ VF RM +++ ISW MV G + +
Sbjct: 327 HGFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERDFISWNSMVTGFSHN 386
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G K+S+ +F+ M + P +T L+VL ACSH+GLV G + SM+ + ++P H
Sbjct: 387 GQGKQSLAMFKRMLDAEVQPTYVTFLAVLTACSHAGLVTDGRRILESMQ-YHGVEPRAEH 445
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMP--FEPDSN-AWASLLSGCKTYKNEQIAERAVKNLW 647
Y +D L R+ +L EA +FI + P + +W +LL C+ + N +IAE+ ++L+
Sbjct: 446 YASFIDALGRNHQLEEASEFIKGLSSRIGPGTTGSWGALLGACRVHGNTEIAEKVAESLF 505
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+L + YV+LSNIYA+AG+W DA +R +M EKGLRK CSW+EVR+ H F
Sbjct: 506 QLEPGNSGRYVMLSNIYAAAGQWDDARRIRAIMKEKGLRKDQACSWIEVRSAKHMF 561
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 187/383 (48%), Gaps = 45/383 (11%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GRA H L+KT ++ L+ RL+ +Y M+N+
Sbjct: 51 GRAAHALLLKTALNHHTLLSNRLIELY-------------------------AMLNSP-- 83
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMK-HGRVEESMWYFERNPF--QNVISWTAAI 156
++ F+ +P RN S+ L++ + + +++ + P +NV+S+ I
Sbjct: 84 ----AASRTAFEDLPYRNAHSYNNLLAALSRGSATLPDALHLLDAMPASSRNVVSYNTII 139
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFS-----SICKACAEINDFRLGLSVFGLIF 211
+NG EAL++F +L EV S+ ACA + R + G +
Sbjct: 140 SALARNGRQGEALRVFARLARDRCLGPEVALDRFAVVSVASACAGMGALRPLREMHGAVV 199
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+G E V + N+++ K G ++ AR++F++M +D VSWT ++ + L EA R
Sbjct: 200 VSGVEVTVIMANAMVDAYSKAGRMEDARTLFNQMSIQDTVSWTSMIAGYCRAKRLDEAIR 259
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+F MPE++ ++W+ +I+ + Q+G + A LF+QM P L A A L
Sbjct: 260 VFHMMPEQDTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLGACAKLGL 319
Query: 332 LRSGMHVHAHVL--KIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ G VH +L +IG++ ++FI NALID+YSKCG+ LVF + E+D +SW
Sbjct: 320 VTRGREVHGFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERD---FISW 376
Query: 389 NSMIGGYGLNGQMEEAKELFDNM 411
NSM+ G+ NGQ +++ +F M
Sbjct: 377 NSMVTGFSHNGQGKQSLAMFKRM 399
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 7/246 (2%)
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
++ N M++A + G +E+A+ LF+ M ++ VSWT++I+G+ + R++E++ F P Q
Sbjct: 208 IMANAMVDAYSKAGRMEDARTLFNQMSIQDTVSWTSMIAGYCRAKRLDEAIRVFHMMPEQ 267
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
+ I+WTA I G QNG AL LF ++L G+ P S ACA++ G V
Sbjct: 268 DTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLGACAKLGLVTRGREVH 327
Query: 208 GLIF--KAGFEK-HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
G I + G + ++ + N+LI + K G++ A VF RM +RD +SW ++ F G
Sbjct: 328 GFILRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERDFISWNSMVTGFSHNG 387
Query: 265 D----LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
L +R+ D + V++ ++ + +G + R+ M + +P ++
Sbjct: 388 QGKQSLAMFKRMLDAEVQPTYVTFLAVLTACSHAGLVTDGRRILESMQYHGVEPRAEHYA 447
Query: 321 IVLSAL 326
+ AL
Sbjct: 448 SFIDAL 453
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 202/701 (28%), Positives = 341/701 (48%), Gaps = 104/701 (14%)
Query: 51 GIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF 110
G H + + + L+ +Y + +A + +L D ++ N M+ ++ G+ + A F
Sbjct: 142 GFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTF 201
Query: 111 DGMPER----NEVSWTALIS----------GFMKHGRVEESMWYFERN------------ 144
M N V++T ++S G HG V S + F+
Sbjct: 202 CEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKC 261
Query: 145 -------------PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
P + ++W I G+VQNGF+ EA LF ++ +GVKP+ VTF+S
Sbjct: 262 GNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFL 321
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
+ I ++G +H +S I R FD K
Sbjct: 322 PS----------------ILESGSLRHCKEVHSYIVRH---------RVPFDVYLK---- 352
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
+ ++DV+ + GD+ AR+IF + + + MI+ Y G +A FR + +
Sbjct: 353 --SALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEG 410
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
N+ + VL A A++ AL+ G +H H+LK +E V + +A+ D+Y+KCG
Sbjct: 411 MVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCG------ 464
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+++ A E F M R+ V W+++IS + ++ +
Sbjct: 465 ----------------------------RLDLAYEFFRRMSDRDSVCWNSMISSFSQNGK 496
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
++ +F +M +SG + + SS L A+A++ +L GK++HG +I+ F D F+ +
Sbjct: 497 PEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVAST 556
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D Y+K G++ + VF+ M KNE+SW ++ G +E ++L+ EM + I P+
Sbjct: 557 LIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPD 616
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+T L ++ AC H+GLVD+G+ YF+ M Y I HY C+VD+ R+GR+ EA D I
Sbjct: 617 HVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTI 676
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
SMPF PD+ W +LL C+ + N ++A+ A ++L +L ++ YVLLSN++A AG W
Sbjct: 677 KSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWA 736
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ VR LM EKG++K G SW++V H F ++P+
Sbjct: 737 SVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPE 777
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 239/553 (43%), Gaps = 78/553 (14%)
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
C + +Q Q + GM + S + ++ ++ GR ++ F + +
Sbjct: 21 CSDASMVQQARQVHTQVIVGGMGDVCAPS-SRVLGLYVLCGRFRDAGNLFFELELRYALP 79
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W I G G+ AL + K+L S V P++ TF + KAC +N+ L + V
Sbjct: 80 WNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTAR 139
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
GF + ++LI L G + AR VFD + RD + W V+L +++ GD A
Sbjct: 140 SLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIG 199
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
F EM S+S++ N+ ++ +LS A+
Sbjct: 200 TFCEM----RTSYSMV---------------------------NSVTYTCILSICATRGN 228
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
+G +H V+ G E D ++N L+ +YSKCG R +F+++ + D V+WN +
Sbjct: 229 FCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTD---TVTWNGL 285
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
I GY NG +EA L FN M+ +G P+
Sbjct: 286 IAGYVQNGFTDEAAPL-------------------------------FNAMISAGVKPDS 314
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF+S L + SL K++H I++ P+DV+L +AL D Y K GD+E +R++F +
Sbjct: 315 VTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQ 374
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+ T M+ G G ++IN F + + + N LT+ SVL AC+ + G
Sbjct: 375 NILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPG 434
Query: 572 LKYF-----NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+ +E I N+ + + DM ++ GRL A +F M + DS W S+
Sbjct: 435 KELHCHILKKRLENIVNVG------SAITDMYAKCGRLDLAYEFFRRMS-DRDSVCWNSM 487
Query: 627 LSGCKTYKNEQIA 639
+S +IA
Sbjct: 488 ISSFSQNGKPEIA 500
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 218/531 (41%), Gaps = 105/531 (19%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C+L ++ G LHG +I +G + + L+ MY L A ++ +
Sbjct: 215 TYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTM 274
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PE--------------------- 115
D V N +I +Q G +EA LF+ M P+
Sbjct: 275 PQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCK 334
Query: 116 -------RNEVSW-----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
R+ V + +ALI + K G VE + F++N +V TA I G+V +G
Sbjct: 335 EVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHG 394
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+ +A+ F L++ G+ N +T +S+ ACA + + G + I K E V+V +
Sbjct: 395 LNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGS 454
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
++ + K G +DLA F RM RD V W
Sbjct: 455 AITDMYAKCGRLDLAYEFFRRMSDRDSVCW------------------------------ 484
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
+ MI+ ++Q+G PE A LFRQM K ++ S LSA A+L AL G +H +V+
Sbjct: 485 -NSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVI 543
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
+ D F+++ LID+YSKCG VF+ + D + VSWNS+I YG +G E
Sbjct: 544 RNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLM---DGKNEVSWNSIIAAYGNHGCPRE 600
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
+L ++EML +G P+ TF ++ A
Sbjct: 601 CLDL-------------------------------YHEMLRAGIHPDHVTFLVIISACGH 629
Query: 464 VASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
+++G H + G + + D Y ++G + + MP
Sbjct: 630 AGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMP 680
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 6/281 (2%)
Query: 353 ISNALIDLYSKCGET---KDGRLVFDSIVEKDVAHVVSWNS-MIGGYGLNGQMEEAKELF 408
++ L L+ C + + R V ++ + V + +S ++G Y L G+ +A LF
Sbjct: 10 LTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLF 69
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
+ R + W+ +I G FD + +ML S P+K TF V+ A + ++
Sbjct: 70 FELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVP 129
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
+H LGF D+F G+AL YA +G I +RRVFD +P ++ I W VM+RG
Sbjct: 130 LCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYV 189
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
+SG +I F EM + N +T +L C+ G G + + + + +
Sbjct: 190 KSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQ-LHGLVIGSGFEFDP 248
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ +V M S+ G L A N+MP + D+ W L++G
Sbjct: 249 QVANTLVAMYSKCGNLLYARKLFNTMP-QTDTVTWNGLIAG 288
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/652 (28%), Positives = 326/652 (50%), Gaps = 96/652 (14%)
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N+ + T + GF +E+++ F+ + W I GF G EA++ + +++
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
+GVK + T+ + K+ A I+ G + ++ K GF V VCNSLI+L +K+G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLG--- 179
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
+W +A ++F+EMPER+ VSW+ MI+ Y G
Sbjct: 180 --------------CAW--------------DAEKVFEEMPERDIVSWNSMISGYLALGD 211
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK-DVFISN 355
+ LF++M + FKP+ L A + + + + G +H H ++ IE DV +
Sbjct: 212 GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMT 271
Query: 356 ALIDLYSKCGE--------------------------TKDGR-----LVFDSIVEKD--- 381
+++D+YSK GE ++GR L F + E++
Sbjct: 272 SILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQ 331
Query: 382 ------------------------------VAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ H+V ++I YG GQ++ A+ +FD M
Sbjct: 332 PDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
++N +SW++II+ Y+++ + +F E+ S +P+ +T +S+L A A SL +G+
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H I+K + + + +L YA GD+E +R+ F+ + K+ +SW ++ A G
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ + S+ LF EM + + PN+ T S+L ACS SG+VD+G +YF SM+ Y I P HY
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
C++D++ R+G S A+ F+ MPF P + W SLL+ + +K+ IAE A + ++K+
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEH 631
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
++ YVLL N+YA AGRW D ++ LM KG+ ++ S VE + + H F
Sbjct: 632 DNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVF 683
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 217/501 (43%), Gaps = 115/501 (22%)
Query: 29 KDITSQNLVIQGRALHG----------HLIKTGIHKERYLTTRLL-----IMYLGSRKSL 73
+DI S N +I G G ++K G +R+ T L + K +
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ + + D++V +++ ++G + A+R+F+GM +RN V+W +I + ++GR
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
V ++ F++ QN G++P+ +T ++ A
Sbjct: 314 VTDAFLCFQKMSEQN------------------------------GLQPDVITSINLLPA 343
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
A + G ++ G + GF H+ + +LI + + G++ A +FDRM +++V+SW
Sbjct: 344 SAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISW 399
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
I IA Y Q+G A LF+++ S
Sbjct: 400 NSI-------------------------------IAAYVQNGKNYSALELFQELWDSSLV 428
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P+++ + +L A A +L G +HA+++K + I N+L+ +Y+ CG+ +D R
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
F+ I+ KD VVSWNS+I Y ++G IS +L
Sbjct: 489 FNHILLKD---VVSWNSIIMAYAVHG--------------------FGRISVWL------ 519
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTAL 492
F+EM+ S PNKSTF+S+L A + +++G + + + G + +
Sbjct: 520 -----FSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCM 574
Query: 493 TDTYAKSGDIESSRRVFDRMP 513
D ++G+ +++R + MP
Sbjct: 575 LDLIGRTGNFSAAKRFLEEMP 595
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 301/608 (49%), Gaps = 73/608 (12%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
+AQ + +G + NE L++ R+ + F++ P N+ W + G+ Q+
Sbjct: 58 QAQIIANGF-QYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSES 116
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
E + LF ++ ++PN TF + K+C +IN G V + K GF + V +
Sbjct: 117 YREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTT 176
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
LI + G V A +F M +R+VV+WT +++ +I DL ARR+FD PER+ V W
Sbjct: 177 LIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLW 236
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
++M++ Y + G EA +LF +M PN
Sbjct: 237 NIMVSGYIEGGDMVEARKLFHEM------PN----------------------------- 261
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+DV N ++ Y+ G + +F+ + E++ + SWN++IGGY NG E
Sbjct: 262 ----RDVMFWNTVLKGYATNGNVEALEGLFEEMPERN---IFSWNALIGGYAHNGLFFEV 314
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
F M +DV PN +T +VL A A +
Sbjct: 315 LGSFKRMLSESDVP------------------------------PNDATLVTVLSACARL 344
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+L+ GK +H G +V++G AL D YAK G IE++ VF M K+ ISW ++
Sbjct: 345 GALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLI 404
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
GLA +++NLF +M+ P+ +T + +L AC+H GLV+ G YF SM Y I
Sbjct: 405 GGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLI 464
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P HY C+VDML+R+GRL +A F+ MP E D WA LL C+ YKN ++AE A++
Sbjct: 465 MPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQ 524
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L +L ++PA YV+LSNIY AGRW D ++ M + G +K GCS +EV + V F+
Sbjct: 525 RLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFY 584
Query: 705 QKTDHNPK 712
+ +P+
Sbjct: 585 SLDERHPQ 592
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 40/418 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK N +I+G +H LIK G ++ T L+ MY +A +I ++ +
Sbjct: 142 VLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERN 201
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES--------- 137
+V MIN I +L A+RLFD PER+ V W ++SG+++ G + E+
Sbjct: 202 VVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPN 261
Query: 138 ----MW------------------YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
W FE P +N+ SW A I G+ NG FE L F ++
Sbjct: 262 RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 321
Query: 176 L-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L ES V PN+ T ++ ACA + LG V +G + +V V N+L+ + K G
Sbjct: 322 LSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGI 381
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE----VSWSVMIAR 290
++ A SVF M+ +D++SW ++ +A +F +M + +++ ++
Sbjct: 382 IENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCA 441
Query: 291 YNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
G E+ F F+ M Y P + ++ LA L M A V K+ +E
Sbjct: 442 CTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAM---AFVRKMPVEA 498
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D I L+ + L ++E + + ++ + YG G+ E+ L
Sbjct: 499 DGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARL 556
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+ +II GF Y+ ++ L A + +R++FD++PD N W M RG A+S
Sbjct: 57 IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSES 116
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
+E + LF +M+ I PN T VL +C + +G + + + N T
Sbjct: 117 YREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEG-EQVHCFLIKCGFRGNPFVGT 175
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
++DM S G + +A M FE + AW S+++G + A R L+ LA E
Sbjct: 176 TLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGYILSADLVSARR----LFDLAPE 230
Query: 653 HPAGYVLLSNI----YASAGRWIDAMNVRKLMTE 682
V+L NI Y G ++A RKL E
Sbjct: 231 RD---VVLWNIMVSGYIEGGDMVEA---RKLFHE 258
>gi|255553249|ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543299|gb|EEF44831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 283/515 (54%), Gaps = 41/515 (7%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+K +++ + N +I+A + G ++A+++FD MPE+N SW A++S +K G ++E
Sbjct: 45 IIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEG 104
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F P + SW + I GF Q+ EAL F+K+ G NE TF S ACA +
Sbjct: 105 ARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSACAGL 164
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
D ++G + GL+ K+ F V + ++LI + K G VD A+ VFD M +R+VVSW +
Sbjct: 165 KDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSL- 223
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
I Y Q+G EA +F +M F+P+
Sbjct: 224 ------------------------------ITCYEQNGPSREALEIFMRMMESGFEPDEV 253
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDS 376
+ V+SA ASL A + G+ +HA V+K + D+ +SNAL+D+Y+KCG + R VFD
Sbjct: 254 TLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCVFDR 313
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ + +VVS SM+ GY ++ A+ LF M +RN VSW+A+I+GY ++ + +
Sbjct: 314 M---PIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNGENEEAL 370
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY------DVFLGT 490
+F + P TF ++L A A++A L+ G+ H ++K GF + DVF+G
Sbjct: 371 RLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVFVGN 430
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D Y K G +E R+F+ M +++ +SW M+ G A++GY E++ LF +M + P
Sbjct: 431 ALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLFRKMLASGEKP 490
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
+ +T++ L ACSH+GLV +G K+F+SM Y ++
Sbjct: 491 DHVTMIGALCACSHAGLVQEGRKHFSSMTEEYGLE 525
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 223/486 (45%), Gaps = 84/486 (17%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
F+ + +C + R + I K F V + N LI K G D AR +FD+M
Sbjct: 22 FAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMP 81
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+++V SW I+ ++ G L E R+F MPE ++ SW+ +IA + Q EEA F +
Sbjct: 82 EKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFVK 141
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R F N F LSA A LK L+ G +H +LK DV++ +ALID+YSKCG
Sbjct: 142 MHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGF 201
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
+ VFD ++E++ VVSWNS+I Y NG EA E
Sbjct: 202 VDCAQRVFDGMMERN---VVSWNSLITCYEQNGPSREALE-------------------- 238
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYD 485
+F M+ SG P++ T +SV+ A AS+A+ ++G ++H ++K D
Sbjct: 239 -----------IFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDD 287
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMP-------------------------------D 514
+ L AL D YAK G I +R VFDRMP +
Sbjct: 288 LILSNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIE 347
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC-----------S 563
+N +SW ++ G ++G +E++ LF +++ +I P T ++L AC +
Sbjct: 348 RNVVSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQA 407
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+ ++ G ++ E + ++DM + G + E +M E D +W
Sbjct: 408 HAHVLKHGFRFQYGEESDVFVG------NALIDMYMKCGSVEEGCRIFENM-VERDYVSW 460
Query: 624 ASLLSG 629
+++ G
Sbjct: 461 NAMIVG 466
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 174/301 (57%), Gaps = 3/301 (0%)
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
++S F+ +L + K+LR +HA ++K +VFI N LID Y KCG D R +F
Sbjct: 18 DSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIF 77
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D + EK+V SWN+++ +G ++E LF +MP+ + SW+++I+G+ +H +F+
Sbjct: 78 DQMPEKNV---FSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEE 134
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
F +M G + N+ TF S L A A + L+ G +HG ++K F DV++G+AL D
Sbjct: 135 ALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALID 194
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y+K G ++ ++RVFD M ++N +SW ++ ++G ++E++ +F M ++ P+E+T
Sbjct: 195 IYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVT 254
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ SV+ AC+ +GL+ + ++ + +VDM ++ GR++EA + M
Sbjct: 255 LASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRM 314
Query: 615 P 615
P
Sbjct: 315 P 315
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/577 (33%), Positives = 297/577 (51%), Gaps = 39/577 (6%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES---GVKPNEVTFSSICKACAE- 196
F+ P +N +W A + G+ N AL LF S P+ T S + KA A
Sbjct: 92 FDTTPHRNTFTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTISCVLKALASS 151
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
L V LI + G + V N+LIT + EV LAR VF
Sbjct: 152 FCSPELAKEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVF-------------- 197
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPN 315
D M ER+ V+W+ MI Y+Q +E RL+ +M S PN
Sbjct: 198 -----------------DGMSERDIVTWNAMIGGYSQRRLYDECKRLYLEMLNVSAVAPN 240
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
V+ A L GM +H V + GIE DV +SNA++ +Y+KCG R +F+
Sbjct: 241 VVTAVSVMQACGQSMDLAFGMELHRFVKESGIEIDVSLSNAVVAMYAKCGRLDYAREMFE 300
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ EKD V++ ++I GY G +++A +F + W+A+ISG +++KQF+ V
Sbjct: 301 GMREKDE---VTYGAIISGYMDYGLVDDAMGVFRGVENPGLNMWNAVISGMVQNKQFEGV 357
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F + +M SG PN T +S+L + + ++L GK++HG I+ G+ +V++ T++ D
Sbjct: 358 FDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRGGKEVHGYAIRRGYEQNVYVSTSIIDA 417
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G I +R VFD ++ I WT ++ A G A ++ L+ +M I P+ +T+
Sbjct: 418 YGKLGCICGARWVFDLSQSRSLIIWTSIISAYAAHGDAGLALGLYAQMLDKGIRPDPVTL 477
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
SVL AC+HSGLVD+ FNSM Y I+P HY C+V +LSR+G+LSEA FI+ MP
Sbjct: 478 TSVLTACAHSGLVDEAWNIFNSMPSKYGIQPLVEHYACMVGVLSRAGKLSEAVQFISEMP 537
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
EP + W LL G + + +I + A +L+++ E+ Y++++N+YA AG+W A
Sbjct: 538 IEPSAKVWGPLLHGASVFGDVEIGKFACDHLFEIEPENTGNYIIMANLYAHAGKWEQAGE 597
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VR+ M GL+K G SW+E + F K N +
Sbjct: 598 VRERMKVIGLQKIRGSSWIETSGGLLSFIAKDVSNGR 634
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/529 (24%), Positives = 226/529 (42%), Gaps = 113/529 (21%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ V N +I + + A+ +FDGM ER+ V+W A+I G Y +R
Sbjct: 173 DIFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGG------------YSQRRL 220
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKACAEINDFRLGL 204
+ E +L+L++L S V PN VT S+ +AC + D G+
Sbjct: 221 YD-------------------ECKRLYLEMLNVSAVAPNVVTAVSVMQACGQSMDLAFGM 261
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ + ++G E VS+ N+++ + K G +D AR +F+ M ++D V++ I+ +++ G
Sbjct: 262 ELHRFVKESGIEIDVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYG 321
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ +A +F + W+ +I+ Q+ E F L RQM PN + +L
Sbjct: 322 LVDDAMGVFRGVENPGLNMWNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILP 381
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ + LR G VH + ++ G E++V++S ++ID Y K G R VFD
Sbjct: 382 SFSYFSNLRGGKEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFD--------- 432
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+ +++ L + W++IIS Y H L ++ +ML
Sbjct: 433 ----------------LSQSRSL---------IIWTSIISAYAAHGDAGLALGLYAQMLD 467
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
G P+ T +SVL A A SG ++
Sbjct: 468 KGIRPDPVTLTSVLTAC-----------------------------------AHSGLVDE 492
Query: 505 SRRVFDRMPDKNEIS-----WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
+ +F+ MP K I + MV L+ +G E++ EM I P+ +L
Sbjct: 493 AWNIFNSMPSKYGIQPLVEHYACMVGVLSRAGKLSEAVQFISEM---PIEPSAKVWGPLL 549
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKP-NGRHYTCVVDMLSRSGRLSEA 607
S G V+ G K+ + + ++ I+P N +Y + ++ + +G+ +A
Sbjct: 550 HGASVFGDVEIG-KF--ACDHLFEIEPENTGNYIIMANLYAHAGKWEQA 595
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 170/333 (51%), Gaps = 12/333 (3%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE--R 143
D+ + N ++ + G L+ A+ +F+GM E++EV++ A+ISG+M +G V+++M F
Sbjct: 275 DVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVE 334
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
NP N+ W A I G VQN L ++ SG+ PN VT +SI + + ++ R G
Sbjct: 335 NPGLNM--WNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRGG 392
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V G + G+E++V V S+I K+G + AR VFD + R ++ WT I+ +
Sbjct: 393 KEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAYAAH 452
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSC 318
GD G A ++ +M ++ + V+ + ++ SG +EA+ +F M ++Y +P
Sbjct: 453 GDAGLALGLYAQMLDKGIRPDPVTLTSVLTACAHSGLVDEAWNIFNSMPSKYGIQPLVEH 512
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
++ ++ L+ L + + ++ IE + L+ S G+ + G+ D +
Sbjct: 513 YACMVGVLSRAGKLSEAVQF---ISEMPIEPSAKVWGPLLHGASVFGDVEIGKFACDHLF 569
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
E + + ++ M Y G+ E+A E+ + M
Sbjct: 570 EIEPENTGNYIIMANLYAHAGKWEQAGEVRERM 602
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 39/285 (13%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS----CFSIVLS 324
AR++FD P RN +W+ M+ Y+ + A LF T +S PN S S VL
Sbjct: 88 ARKVFDTTPHRNTFTWNAMLLGYSFNSMFRHALNLFGSFT-FSTTPNASPDNFTISCVLK 146
Query: 325 ALA-SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
ALA S + VH +L+ G+ D+F+ NALI Y +C E R VFD + E+D
Sbjct: 147 ALASSFCSPELAKEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVFDGMSERD-- 204
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+V+WN+MIGGY +E K L+ M +
Sbjct: 205 -IVTWNAMIGGYSQRRLYDECKRLYLEM------------------------------LN 233
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
+S PN T SV+ A L G +LH + + G DV L A+ YAK G ++
Sbjct: 234 VSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIEIDVSLSNAVVAMYAKCGRLD 293
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+R +F+ M +K+E+++ ++ G + G +++ +F +E +
Sbjct: 294 YAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVENPGL 338
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 309 RYSFKPNTSCFSIVLSAL---ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
R P F+ SAL + + LR G +HA ++ + + D F+++ LI YSK
Sbjct: 24 RRRLSPPGVDFAAYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSK-- 81
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ AH A+++FD P RN +W+A++ G
Sbjct: 82 --------------SNHAHF------------------ARKVFDTTPHRNTFTWNAMLLG 109
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKS----TFSSVLCA-SASVASLEKGKDLHGKIIKL 480
Y + F +F S PN S T S VL A ++S S E K++H I++
Sbjct: 110 YSFNSMFRHALNLFGSFTFS-TTPNASPDNFTISCVLKALASSFCSPELAKEVHCLILRR 168
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G D+F+ AL Y + ++ +R VFD M +++ ++W M+ G ++ E L+
Sbjct: 169 GLYSDIFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGGYSQRRLYDECKRLY 228
Query: 541 EEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
EM S + PN +T +SV+ AC S + G++ ++ I+ + VV M +
Sbjct: 229 LEMLNVSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKE-SGIEIDVSLSNAVVAMYA 287
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ GRL A + M E D + +++SG Y
Sbjct: 288 KCGRLDYAREMFEGMR-EKDEVTYGAIISGYMDY 320
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 254/457 (55%), Gaps = 34/457 (7%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L + ++ G + +ARR+FDEMPERN VSW+ +I+ G EAFRLF M
Sbjct: 16 VLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAG 75
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ F++++ A A L+ + G +HA LK+GI D+F+S ALID+YSKCG +D R VF+
Sbjct: 76 SFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFE 135
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ EK V WN++I GY L+G EEA ++
Sbjct: 136 EMPEKT---TVGWNTIIAGYALHGYSEEALDM---------------------------- 164
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+ EM SG + TFS ++ A +AS+E K H +I+ GF D+ TAL D
Sbjct: 165 ---YYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDF 221
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y+K G IE +R VFD+M KN ISW ++ G G E++ LFE+M + + PN +T
Sbjct: 222 YSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITF 281
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
L+VL ACSHSGL ++G + F SM IKP HY C+++++ R G L EA I P
Sbjct: 282 LAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAP 341
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
F+P +N WA+LL+ C+ +N ++ + A + L+ + + Y++L NIY SAG +A +
Sbjct: 342 FKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAAD 401
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
V + KGLR CSW+EV+ + H F + +P+
Sbjct: 402 VVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQ 438
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 164/345 (47%), Gaps = 69/345 (20%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
FD + N ++ +++ G + +A+RLFD MPERN
Sbjct: 8 FDQYMRNRVLLMHVKCGMMIDARRLFDEMPERN--------------------------- 40
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
++SW I G V G EA +LFL + E TF+ + +A A GL
Sbjct: 41 ----LVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASA-------GL 89
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ +S+ L +LKMG D D+ ++D++ + G
Sbjct: 90 EL------------ISIGRQLHACTLKMGIGD------------DIFVSCALIDMYSKCG 125
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+ +AR +F+EMPE+ V W+ +IA Y GY EEA ++ +M K + FS+++
Sbjct: 126 SIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVR 185
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A L ++ HA +++ G D+ + AL+D YSK G +D R VFD + K+
Sbjct: 186 ICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKN--- 242
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
V+SWN++IGGYG +G+ EA ELF+ M + N +++ A++S
Sbjct: 243 VISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSA 287
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 203/471 (43%), Gaps = 69/471 (14%)
Query: 47 LIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEA 106
+I G ++Y+ R+L+M++ ++A + ++ +LV N +I+ + G+ EA
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 107 QRLFDGMPER--NEVSWT-------------------------------------ALISG 127
RLF M E + S+T ALI
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ K G +E++ + FE P + + W I G+ +G+S EAL ++ ++ +SGVK + TF
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
S I + CA + + + GF + +L+ K G ++ AR VFD+M
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRL 303
++V+SW ++ + G EA +F++M + N +++ +++ + SG E + +
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEI 300
Query: 304 FRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
F+ M R + KP ++ ++ + R G+ A L G +N L +
Sbjct: 301 FQSMGRDNRIKPRAMHYACMIELMG-----REGLLDEALALIRGAPFKP-TANMWAALLT 354
Query: 363 KCGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK-----R 414
C ++ G+ + + + + ++ ++ Y G ++EA ++ + + R
Sbjct: 355 ACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMR 414
Query: 415 NDVSWSAI-------ISGYLEHKQFDLVFAVFNEMLLS----GEIPNKSTF 454
SW + +SG H Q ++ ++++L G +PN+ T
Sbjct: 415 PVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTL 465
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 26/297 (8%)
Query: 29 KDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLV 88
K N +I G ALHG+ + L MY R S + D F ++
Sbjct: 140 KTTVGWNTIIAGYALHGY------------SEEALDMYYEMRDS----GVKMDHFTFSMI 183
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V C A+++ A + G + V+ TAL+ + K GR+E++ F++ +N
Sbjct: 184 VRICARLASVEHAKQAHAALIRHGFGS-DIVANTALVDFYSKWGRIEDARHVFDKMASKN 242
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
VISW A I G+ +G EA++LF ++++ + PN +TF ++ AC+ G +F
Sbjct: 243 VISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQ 302
Query: 209 LIFKAGFEKHVSVCNS-LITLSLKMGEVDLARSVFDRMEKRDVVS-WTVILDVF-----I 261
+ + K ++ + +I L + G +D A ++ + + W +L
Sbjct: 303 SMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENF 362
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
E+G A +++ P++ ++ V++ YN +G +EA + + R + C
Sbjct: 363 ELGKFA-AEKLYGMEPDKLN-NYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVC 417
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+I GF +D ++ + + K G + +RR+FD MP++N +SW ++ GL + G E+
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVD 596
LF M + T ++ A + L+ G + ++ I + ++D
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIG-RQLHACTLKMGIGDDIFVSCALID 119
Query: 597 MLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
M S+ G + +A MP E + W ++++G
Sbjct: 120 MYSKCGSIEDARFVFEEMP-EKTTVGWNTIIAG 151
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/591 (31%), Positives = 296/591 (50%), Gaps = 65/591 (10%)
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
+P+ V T LI + G + E+ F+ P ++V++WT I G+ A +F
Sbjct: 38 IPKGPSVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVF 97
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
+++ + PN T SS+ KAC + G V GL K G + + V N+L+ +
Sbjct: 98 CEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDM---- 153
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
+ V +D +A +F + +NEVSW+ +IA Y
Sbjct: 154 -----------------YATCCVSMD---------DACMVFRGIHLKNEVSWTTLIAGYT 187
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
R+FRQM + N FSI + A S+ + G +HA V K G E ++
Sbjct: 188 HRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLP 247
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
+ N+++D+Y +C + F + ++D +++WN++I GY
Sbjct: 248 VMNSILDMYCRCSCFSEANRYFYEMNQRD---LITWNTLIAGY----------------- 287
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
+R++ + S + +E + F PN TF+S++ A A++A L G+
Sbjct: 288 ERSNPTESLYVFSMMESEGFS---------------PNCFTFTSIMAACATLAFLNCGQQ 332
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
+HG+II+ G ++ L AL D Y+K G+I S +VF M ++ +SWT M+ G GY
Sbjct: 333 IHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGY 392
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
+E++ LF++M ++ I P+ + +++L ACSH+GLVD+GL+YF M YNI P+ Y
Sbjct: 393 GEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYG 452
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
CVVD+L R+G++ EA + I SMPF+PD W L CK + + + A + L
Sbjct: 453 CVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPH 512
Query: 653 HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
YV+LSNIYA+ G+W + +RKLM G +K G SWVEV N V+ F
Sbjct: 513 MAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSF 563
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 213/513 (41%), Gaps = 112/513 (21%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR 70
+N E N++ T +LK + GR +HG IK G+ Y+ L+ MY
Sbjct: 101 MNEELDPNAF--TISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYA--- 155
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
C ++ +++A +F G+ +NEVSWT LI+G
Sbjct: 156 --------------------TCCVS-------MDDACMVFRGIHLKNEVSWTTLIAG--- 185
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
Y R+ + L++F ++L V+ N +FS
Sbjct: 186 ---------YTHRDD-------------------GYGGLRVFRQMLLEEVELNPFSFSIA 217
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
+AC I G + + K GFE ++ V NS++ + + A F M +RD+
Sbjct: 218 VRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDL 277
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
++W+ +IA Y +S P E+ +F M
Sbjct: 278 -------------------------------ITWNTLIAGYERSN-PTESLYVFSMMESE 305
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
F PN F+ +++A A+L L G +H +++ G++ ++ +SNALID+YSKCG D
Sbjct: 306 GFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADS 365
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK---RND-VSWSAIISGY 426
VF + +D +VSW +M+ GYG +G EEA ELFD M + R D V + AI+S
Sbjct: 366 HQVFGGMSRRD---LVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSAC 422
Query: 427 LEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
D F M+ I P++ + V+ +E+ +L I + F D
Sbjct: 423 SHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYEL---IESMPFKPD 479
Query: 486 -----VFLGTALTDTYAKSGDIESSRRVFDRMP 513
FLG T+ G + ++ R+ D P
Sbjct: 480 ECVWGPFLGACKAHTFPNLGKL-AAHRILDLRP 511
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 125/319 (39%), Gaps = 77/319 (24%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
+FS+ F+ T ++ + + G+ +HG +I
Sbjct: 298 VFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRII------------------- 338
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
R+ L+ N L + N +I+ + GN+ ++ ++F GM R+ VSWTA++ G
Sbjct: 339 --RRGLDGN----------LALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIG 386
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
+ HG E EA++LF K++ SG++P+ V F
Sbjct: 387 YGTHGYGE-------------------------------EAVELFDKMVRSGIRPDRVVF 415
Query: 188 SSICKACAEINDFRLGLSVFGLI---FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
+I AC+ GL F L+ + ++ + C ++ L + G+V+ A + +
Sbjct: 416 MAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGC--VVDLLGRAGKVEEAYELIES 473
Query: 245 ME-KRDVVSWTVIL-----DVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR-YNQSGYP 297
M K D W L F +G L A RI D P VM++ Y G
Sbjct: 474 MPFKPDECVWGPFLGACKAHTFPNLGKLA-AHRILDLRPHM--AGTYVMLSNIYAADGKW 530
Query: 298 EEAFRLFRQMTRYSFKPNT 316
E RL + M R K T
Sbjct: 531 GEFARLRKLMKRMGNKKET 549
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 269/488 (55%), Gaps = 4/488 (0%)
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
+F AG N+++ + G+VD A VF RM KR+ + + ++ +F G + EA
Sbjct: 160 VFDAGPVWDAVSWNTILAAYVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRRGMVEEA 219
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
R +FDE R+ +W+ MI+ + ++ EA +F M R + + + V++A A
Sbjct: 220 RGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVAACAQS 279
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ +R+G H V++ G+ + I N LI +YS C + R +FDS D SWN
Sbjct: 280 EVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDS---GDCLDQFSWN 336
Query: 390 SMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP 449
SMI GY NG +E A LF MP +++VSWS +ISG +++ Q VF+ M G P
Sbjct: 337 SMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQGVRP 396
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
++ T SV+ A ++++LEKGK +H + + + LGT+L D Y K G +E++ VF
Sbjct: 397 DEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAAMDVF 456
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-PNELTILSVLFACSHSGLV 568
+ M +K W ++ GLA +G +S+ +F EME +S PNE+T VL AC H+GLV
Sbjct: 457 NIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEITFTGVLSACRHAGLV 516
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G +F M+ Y I PN RHY C+VD+L R+G + EAED I SMP PD AW +LL
Sbjct: 517 EEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMPMSPDVPAWGALLG 576
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C + ++ ER + L L H +LSNIYA G W ++R M ++ + K
Sbjct: 577 ACWKHGENEVGERVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQSVNDLRDSMKQRHVPKV 636
Query: 689 GGCSWVEV 696
G S VE+
Sbjct: 637 SGYSVVEM 644
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 151/611 (24%), Positives = 259/611 (42%), Gaps = 90/611 (14%)
Query: 12 NPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRK 71
+P+T + + +D++ +GR + H I+ G + YL L+ MY
Sbjct: 100 SPDTYTHPILAAACAARRDVS------EGRQVQSHAIRHGFGDDLYLRNALMHMYSVCGC 153
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
+A + +D V N ++ A + G++++A +F MP+RN + ++++S F +
Sbjct: 154 LWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRR 213
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G VEE+ F+ +++ +WTA I F +N EAL +F + +E S+
Sbjct: 214 GMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVV 273
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
ACA+ R G GL+ +AG +++ N LI + +V AR +FD + D
Sbjct: 274 AACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQF 333
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW ++ +++ G + A +F MP+++ VSWS MI+ Q+ A +F M
Sbjct: 334 SWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQG 393
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+P+ V+SA +L AL G VH +V + + + +LID+Y KCG +
Sbjct: 394 VRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAAM 453
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VF+ + EK WN++I G +NG + ++ E+F M
Sbjct: 454 DVFNIMEEKGAP---CWNAVIVGLAMNGLVTKSLEIFSEMEAS----------------- 493
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
S IPN+ TF+ VL A
Sbjct: 494 -------------STAIPNEITFTGVLSAC------------------------------ 510
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEI-----SWTVMVRGLAESGYAKESINLFEEMEKT 546
+G +E R F M K +I + MV L +GY KE+ +L E M
Sbjct: 511 -----RHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMP-- 563
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH---YTCVVDMLSRSGR 603
++P+ ++L AC G + G + + N+ P RH T + ++ ++ G
Sbjct: 564 -MSPDVPAWGALLGACWKHGENEVGERVGRKL---VNLDP--RHDGFQTMLSNIYAKEGM 617
Query: 604 LSEAEDFINSM 614
D +SM
Sbjct: 618 WQSVNDLRDSM 628
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 165/392 (42%), Gaps = 45/392 (11%)
Query: 33 SQNLVIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHN 91
+Q+ VI+ G HG +I+ G+ + L+ MY + A + + D N
Sbjct: 277 AQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFSWN 336
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
MI ++ G++E A LF MP+++ VSW+ +IS
Sbjct: 337 SMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMIS------------------------- 371
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
G VQN S AL +F + GV+P+EVT S+ AC ++ G SV +
Sbjct: 372 ------GCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVR 425
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
+ + + SLI + +K G ++ A VF+ ME++ W ++ G + ++
Sbjct: 426 QNKCYITLVLGTSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLE 485
Query: 272 IFDEMPER-----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSA 325
IF EM NE++++ +++ +G EE F+ M +Y PN + ++
Sbjct: 486 IFSEMEASSTAIPNEITFTGVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDL 545
Query: 326 LASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
L R+G A L + + DV AL+ K GE + G V +V D
Sbjct: 546 LG-----RAGYVKEAEDLIESMPMSPDVPAWGALLGACWKHGENEVGERVGRKLVNLDPR 600
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
H + Y G + +L D+M +R+
Sbjct: 601 HDGFQTMLSNIYAKEGMWQSVNDLRDSMKQRH 632
>gi|302767812|ref|XP_002967326.1| hypothetical protein SELMODRAFT_30579 [Selaginella moellendorffii]
gi|300165317|gb|EFJ31925.1| hypothetical protein SELMODRAFT_30579 [Selaginella moellendorffii]
Length = 569
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 307/587 (52%), Gaps = 23/587 (3%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DLV N MI A Q GNL+ AQ +F MP RN VSW A+I G + + F+ P
Sbjct: 1 DLVAWNAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAIIDGCAQGQDEALAKKVFDSMP 60
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+ V+SWTA + + Q+G EA L K+ N V+++ + +A A+ L +
Sbjct: 61 QREVVSWTAMVATYSQSGRLEEARALLSKM----PALNIVSWNVMIQAFAD----NLLVE 112
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
F E N++IT + ++ LAR+ FDRM +RDVVSW ++ + + G
Sbjct: 113 DAKERFDRAPEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRDVVSWATMIQSYAQEGQ 172
Query: 266 --LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
+ +A+ IFD P+RN VSW+VMI Y+ SG ++A +F M + I
Sbjct: 173 PSMDQAKEIFDRAPQRNVVSWNVMITGYSASGRIKQAKAVFDTMPQKDV--------ISW 224
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+AL + + V + N ++ ++ + R +FD + E+ +A
Sbjct: 225 AALVAGYLQNQQLAEAKRVFDRMPATNAVCCNTVMASFAGADRMPETRSLFDRMPERTLA 284
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND--VSWSAIISGYLEHKQFDLVFAVFNE 441
SW++M+GGY +G AK FD MP+R+ VSW+A+I+G+L++ + +F E
Sbjct: 285 ---SWSTMLGGYAQSGHTASAKSFFDRMPQRDHDLVSWNALIAGHLDNGLDERALQLFLE 341
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M G P+ ++++S L A A +ASL +D+H ++ K G D F+ AL D Y KSG
Sbjct: 342 MDRRGCSPDPASYASALAACAGLASLGAARDIHWRLCKAGLETDAFVHNALVDFYGKSGR 401
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ + VF + + ++W + G + G + ++L ++ + P+ +T L++L A
Sbjct: 402 MADAELVFQSLASVDVVTWNALAAGFSRQGSYRLVVDLLWAIKDQGLEPDGITFLALLAA 461
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
H+GLVD G + F +M Y I+ HY C+VDML R+ RL EA + +MP P S
Sbjct: 462 YGHAGLVDHGRRAFAAMVESYRIEAGIEHYHCLVDMLGRANRLEEALAEVAAMPHRPSSV 521
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
W ++LS C +KN +A A ++L + + PA YVL++N+Y SAG
Sbjct: 522 TWTTVLSTCVKWKNLDVASVAFESLLGIDPDGPAAYVLMANVYGSAG 568
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 240/537 (44%), Gaps = 81/537 (15%)
Query: 29 KDITSQNLVIQG------RALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
++ S N +I G AL + + +E T ++ Y S + EA ++ +
Sbjct: 31 RNFVSWNAIIDGCAQGQDEALAKKVFDSMPQREVVSWTAMVATYSQSGRLEEARALLSKM 90
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
++V N MI A +E+A+ FD PE + VSW A+I+ + + ++ + F+
Sbjct: 91 PALNIVSWNVMIQAFADNLLVEDAKERFDRAPEHDFVSWNAIITAYAQTSQIFLARAAFD 150
Query: 143 RNPFQNVISWTAAICGFVQNG-FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
R P ++V+SW I + Q G S + K ++ + + N V+++ + + +
Sbjct: 151 RMPQRDVVSWATMIQSYAQEGQPSMDQAK---EIFDRAPQRNVVSWNVMITGYSASGRIK 207
Query: 202 LGLSVFGLIFK----------AGFEKHVSV-----------------CNSLITLSLKMGE 234
+VF + + AG+ ++ + CN+++
Sbjct: 208 QAKAVFDTMPQKDVISWAALVAGYLQNQQLAEAKRVFDRMPATNAVCCNTVMASFAGADR 267
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE--VSWSVMIARYN 292
+ RS+FDRM +R + SW+ +L + + G A+ FD MP+R+ VSW+ +IA +
Sbjct: 268 MPETRSLFDRMPERTLASWSTMLGGYAQSGHTASAKSFFDRMPQRDHDLVSWNALIAGHL 327
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVF 352
+G E A +LF +M R P+ + ++ L+A A L +L + +H + K G+E D F
Sbjct: 328 DNGLDERALQLFLEMDRRGCSPDPASYASALAACAGLASLGAARDIHWRLCKAGLETDAF 387
Query: 353 ISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP 412
+ NAL+D Y K G D LVF S+ D VV+WN++ G+ G
Sbjct: 388 VHNALVDFYGKSGRMADAELVFQSLASVD---VVTWNALAAGFSRQG------------- 431
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
S+ ++ DL++A+ ++ G P+ TF ++L A ++ G+
Sbjct: 432 -----SYRLVV---------DLLWAIKDQ----GLEPDGITFLALLAAYGHAGLVDHGRR 473
Query: 473 LHGKIIKLGFPYDVFLGT----ALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMV 524
+++ Y + G L D ++ +E + MP + + ++WT ++
Sbjct: 474 AFAAMVE---SYRIEAGIEHYHCLVDMLGRANRLEEALAEVAAMPHRPSSVTWTTVL 527
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 292/576 (50%), Gaps = 78/576 (13%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
NV SW + I ++G S EAL+ F + + +KPN TF K+C+ + D G
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
GFE + V ++L+ D++ + G+L
Sbjct: 176 QQALIFGFEPDLFVSSALV-------------------------------DMYSKCGELR 204
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM---TRYSFKPNTSCFSI--- 321
+AR +FDE+ RN VSW+ MI Y Q+ A LF++ S C
Sbjct: 205 DARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAM 264
Query: 322 --VLSALA--SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
VLSA + S K++ G VH ++K G E D+ + N L+D Y+KCG
Sbjct: 265 VSVLSACSRVSEKSITEG--VHGFLIKRGFEGDLGVENTLMDAYAKCG------------ 310
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFA 437
++ ++ +FD M +R+ +SW++II+ Y ++
Sbjct: 311 ----------------------ELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESME 348
Query: 438 VFNEMLLSGEIP-NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F+ M+ GEI N T S+VL A A S GK +H ++IK+G +VF+GT++ D Y
Sbjct: 349 IFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMY 408
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K G +E +R+ FDRM +KN SW+ MV G G+AKE++ +F EM + PN +T +
Sbjct: 409 CKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFV 468
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
SVL ACSH+GL+++G +F +M ++++P HY C+VD+L R+G L EA D I M
Sbjct: 469 SVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKL 528
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
PD W +LL C+ +KN + E + + L++L ++ YVLLSNIYA AGRW D +
Sbjct: 529 RPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERM 588
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
R LM GL K G S V+++ +VH F +P+
Sbjct: 589 RILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQ 624
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 165/618 (26%), Positives = 265/618 (42%), Gaps = 135/618 (21%)
Query: 3 ASLRSLFSINPE--TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTT 60
A LR +S NP T FN Y++ ++ S N VI A G ++
Sbjct: 92 AVLRRRYSNNPNLTTLFNKYVDK-----TNVFSWNSVIAELARSGDSVEA---------- 136
Query: 61 RLLIMYLGSRK-SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
L + RK SL+ N + F + +C ++ G Q L G V
Sbjct: 137 --LRAFSSMRKLSLKPNR-----STFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFV 189
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL--E 177
S +AL+ + K G + ++ F+ +N++SWT+ I G+VQN + AL LF + L E
Sbjct: 190 S-SALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEE 248
Query: 178 SG------VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
SG V + + S+ AC+ +++ + V G + K GFE + V N+L+ K
Sbjct: 249 SGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAK 308
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
GE+ ++R VFD M +RDV+SW I+ V+ + G E+ IF M + E+++
Sbjct: 309 CGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY------- 361
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
N S VL A A + R G +H V+K+G+E +V
Sbjct: 362 -----------------------NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 398
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
F+ ++ID+Y KCG+ + R FD + EK+V SW++M+ GYG++G +EA E
Sbjct: 399 FVGTSIIDMYCKCGKVEMARKAFDRMREKNVK---SWSAMVAGYGMHGHAKEALE----- 450
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
VF EM ++G PN TF SVL A + LE+G
Sbjct: 451 --------------------------VFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW 484
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++ FD P + MV L +G
Sbjct: 485 HW----------------------------FKAMSHEFDVEPGVEH--YGCMVDLLGRAG 514
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP-NGRH 590
Y KE+ +L + M+ + P+ + ++L AC VD G S ++ + P N +
Sbjct: 515 YLKEAFDLIKGMK---LRPDFVVWGALLGACRMHKNVDLGEI---SARKLFELDPKNCGY 568
Query: 591 YTCVVDMLSRSGRLSEAE 608
Y + ++ + +GR + E
Sbjct: 569 YVLLSNIYADAGRWEDVE 586
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 32/235 (13%)
Query: 413 KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKD 472
K N SW+++I+ F+ M PN+STF + + +++ L G+
Sbjct: 114 KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 173
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY 532
H + + GF D+F+ +AL D Y+K G++ +R +FD + +N +SWT M+ G ++
Sbjct: 174 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 233
Query: 533 AKESINLFEE--MEKTS------ITPNELTILSVLFACS-----------HSGLVDKGLK 573
A ++ LF+E +E++ + + + ++SVL ACS H L+ +G +
Sbjct: 234 AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFE 293
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+E ++D ++ G L + + M E D +W S+++
Sbjct: 294 GDLGVE------------NTLMDAYAKCGELGVSRRVFDGMA-ERDVISWNSIIA 335
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 175/630 (27%), Positives = 323/630 (51%), Gaps = 40/630 (6%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI+ + K+ ++ + F+ P Q W + +++ +AL+LF ++ + K
Sbjct: 171 ALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKA 230
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ T + +AC ++ G + G + + G + S+CNS++++ + ++LAR F
Sbjct: 231 TDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAF 290
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPE 298
D E + SW I+ + L A + EM + + ++W+ +++ + G E
Sbjct: 291 DSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYE 350
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
FR + FKP++ + L A+ L G +H ++++ +E DV++ +L+
Sbjct: 351 NVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLV 410
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVA--------------------------------HVV 386
D Y K +VF K++ +V
Sbjct: 411 DKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLV 470
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+WNS++ GY ++G+ EEA + + + N VSW+A+ISG +++ + F++M
Sbjct: 471 TWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQM 530
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
PN +T ++L A A + L+ G+++H ++ GF D+++ TAL D Y K G +
Sbjct: 531 QEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKL 590
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ + VF + +K W M+ G A G+ +E LF+EM KT + P+ +T ++L C
Sbjct: 591 KVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGC 650
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+SGLV G KYF+SM+ YNI P HY+C+VD+L ++G L EA DFI+++P + D++
Sbjct: 651 KNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASI 710
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W ++L+ C+ +K+ +IAE A +NL +L + A Y L+ NIY++ RW D +++ MT
Sbjct: 711 WGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTA 770
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G++ SW++V+ +H F + +P+
Sbjct: 771 LGVKIPNVWSWIQVKQTIHVFSTEGKSHPE 800
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/575 (24%), Positives = 251/575 (43%), Gaps = 74/575 (12%)
Query: 64 IMYLGSRKSLEANEIVKDLNGFDLVVHN-CMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
I L S + L A +I+K +LV + M+ +Q+G+ E A ++F RN + W
Sbjct: 41 IRTLNSVRELHA-QIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWN 99
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+ I F G G S E L +F +L + GVK
Sbjct: 100 SFIEEFASFG------------------------------GDSHEILAVFKELHDKGVKF 129
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ + + K C + + LG+ V + K GF V + +LI L K +D A V
Sbjct: 130 DSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQV- 188
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
FDE P + + W+ ++ +S E+A
Sbjct: 189 ------------------------------FDETPLQEDFLWNTIVMANLRSEKWEDALE 218
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR+M S K +L A L+AL G +H +V++ G + I N+++ +YS
Sbjct: 219 LFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYS 278
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVS 418
+ + R+ FDS + + A SWNS+I Y +N + A +L M K + ++
Sbjct: 279 RNNRLELARVAFDSTEDHNSA---SWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIIT 335
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W++++SG+L ++ V F + +G P+ + +S L A + GK++HG I+
Sbjct: 336 WNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIM 395
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ YDV++ T+L D Y K+ ++ + VF +KN +W ++ G G +
Sbjct: 396 RSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEK 455
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
L +M++ I P+ +T S++ S SG ++ L N ++ + + PN +T ++
Sbjct: 456 LLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSL-GLTPNVVSWTAMISGC 514
Query: 599 SRSGRLSEAEDFINSMPFE---PDSNAWASLLSGC 630
++ +A F + M E P+S +LL C
Sbjct: 515 CQNENYMDALQFFSQMQEENVKPNSTTICTLLRAC 549
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 23 TCLC-LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKD 81
T +C LL+ +L+ G +H ++ G + Y+ T L+ MY K A+E+ ++
Sbjct: 540 TTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRN 599
Query: 82 LNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEES 137
+ L NCM+ +G+ EE LFD M + + +++TAL+SG G V +
Sbjct: 600 IKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDG 659
Query: 138 MWYFER-------NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
YF+ NP S + G + GF EAL + + K + + ++
Sbjct: 660 WKYFDSMKTDYNINPTIEHYSCMVDLLG--KAGFLDEALDFIHAVPQ---KADASIWGAV 714
Query: 191 CKACAEINDFRLG 203
AC D ++
Sbjct: 715 LAACRLHKDIKIA 727
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 214/726 (29%), Positives = 348/726 (47%), Gaps = 111/726 (15%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T C++K V G A+HG +KT + + ++ L+ MY A ++ +
Sbjct: 198 TLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKM 257
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDG--------MPE-------------RNEVSW 121
+LV N ++ A ++ G EE+ LF G MP+ + EV
Sbjct: 258 PQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRL 317
Query: 122 --------------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQ 161
++L+ + K G + E+ F+ N +NVISW + I G+ +
Sbjct: 318 GMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSK 376
Query: 162 NGFSFEALKLFLKL-LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHV 219
+ A +L K+ +E VK NEVT ++ C E F + G + GF +
Sbjct: 377 DRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDE 436
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N+ + K G + A VF ME + V S
Sbjct: 437 LVANAFVAGYAKCGSLHYAEGVFCGMESKMVSS--------------------------- 469
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
W+ +I + Q+G+P +A L+ M +P+ + +LSA A LK+L G +H
Sbjct: 470 ----WNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIH 525
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+L+ G E D FI +L+ LY +CG
Sbjct: 526 GSMLRNGFELDEFICISLVSLYVQCG---------------------------------- 551
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHK-QFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
++ AK FDNM ++N V W+ +I+G+ +++ FD +F++ML S P++ + L
Sbjct: 552 KILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFD-ALDMFHQMLSSKIWPDEISIIGAL 610
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A + V++L GK+LH +K F+ +L D YAK G +E S+ +FDR+ K E+
Sbjct: 611 GACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEV 670
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
+W V++ G G+ +++I LF+ M+ P+ +T +++L AC+H+GLV +GL+Y M
Sbjct: 671 TWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQM 730
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ ++ IKP HY CVVDML R+GRL+EA + +N +P +PDS W+SLLS C+ Y++ I
Sbjct: 731 QSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDI 790
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E+ L +L + YVL+SN YA G+W + +R+ M E GL+K GCSW+E+
Sbjct: 791 GEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGG 850
Query: 699 QVHFFF 704
+V F
Sbjct: 851 KVSRFL 856
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 223/501 (44%), Gaps = 77/501 (15%)
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE-SGVKPNEVTFSSICKAC 194
+S F + +N+ W A + G+++N +A+ +F++++ + P+ T + KAC
Sbjct: 147 DSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKAC 206
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
+ D RLG +V G K V V N+LI + K G V+ A VFD+M +R++VSW
Sbjct: 207 VGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWN 266
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
++ +E G E+ +F + +E P
Sbjct: 267 SVMYACLENGVFEESYGLFKGLLNGDE-----------------------------GLMP 297
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + V+ A +R GM H LK+G+ ++ ++++L+D+YSKCG + R++F
Sbjct: 298 DVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF 357
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D+ + +V+SWNSMIGGY + A EL M + V
Sbjct: 358 DT----NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK---------------- 397
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF-PYDVFLGTALT 493
N+ T +VL K K++HG ++ GF D + A
Sbjct: 398 --------------VNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFV 443
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
YAK G + + VF M K SW ++ G ++G+ +++++L+ M + + P+
Sbjct: 444 AGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLF 503
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG---RHYTCV--VDMLSRSGRLSEAE 608
TI S+L AC+ + G + SM NG + C+ V + + G++ A+
Sbjct: 504 TIASLLSACARLKSLSCGKEIHGSM------LRNGFELDEFICISLVSLYVQCGKILLAK 557
Query: 609 DFINSMPFEPDSNAWASLLSG 629
F ++M E + W ++++G
Sbjct: 558 LFFDNME-EKNLVCWNTMING 577
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 140/281 (49%), Gaps = 17/281 (6%)
Query: 360 LYSKCGETKD---GRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
L CGE K+ GR + + I + DV + +M Y + ++ +F+
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTM---YSICDSPYDSCLVFNAS 155
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEML-LSGEIPNKSTFSSVLCASASVASLEKG 470
++N W+A++SGYL + F VF EM+ L+ +P+ T V+ A V + G
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215
Query: 471 KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES 530
+ +HG +K DVF+G AL Y K G +ES+ +VFD+MP +N +SW ++ E+
Sbjct: 216 EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLEN 275
Query: 531 GYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
G +ES LF+ + + P+ T+++V+ C+ G V G+ F+ + +
Sbjct: 276 GVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGEL 334
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ + ++DM S+ G L EA ++ E + +W S++ G
Sbjct: 335 KVNSSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGG 373
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 35/318 (11%)
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ DVV T ++ ++ ++ +F+ +N W+ +++ Y ++ +A +F +
Sbjct: 126 QNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVE 185
Query: 307 MTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M + F P+ V+ A + +R G VH LK + DVF+ NALI +Y K G
Sbjct: 186 MISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFG 245
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ VFD + +++ +VSWNS++ NG EE+ LF + ++
Sbjct: 246 FVESAVKVFDKMPQRN---LVSWNSVMYACLENGVFEESYGLFKGLLNGDE--------- 293
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
G +P+ +T +V+ A + G HG +KLG +
Sbjct: 294 --------------------GLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGE 333
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME- 544
+ + ++L D Y+K G + +R +FD +KN ISW M+ G ++ + + L +M+
Sbjct: 334 LKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQM 392
Query: 545 KTSITPNELTILSVLFAC 562
+ + NE+T+L+VL C
Sbjct: 393 EDKVKVNEVTLLNVLPVC 410
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 127/565 (22%), Positives = 235/565 (41%), Gaps = 125/565 (22%)
Query: 20 YIETCLCLL--KDITSQNLVIQG--------RALHGHLIKTGIHKERYLTTRLLIMYLGS 69
Y E C + K ++S N +I G +AL +L+ G E L T ++ +
Sbjct: 454 YAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACA 513
Query: 70 R-KSLEANEIVKD---LNGFDLVVHNC--MINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
R KSL + + NGF+L C +++ +Q G + A+ FD M E+N V W
Sbjct: 514 RLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNT 573
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
+I+ GF QN F F+AL +F ++L S + P+
Sbjct: 574 MIN-------------------------------GFSQNEFPFDALDMFHQMLSSKIWPD 602
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
E++ AC++++ RLG + K+ +H V SLI + K G ++ ++++FD
Sbjct: 603 EISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFD 662
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
R+ + V+ W+V+I Y G+ +A L
Sbjct: 663 RVHLKGEVT-------------------------------WNVLITGYGIHGHGRKAIEL 691
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F+ M F+P++ F +L+A HA ++ G+E L + S
Sbjct: 692 FKSMQNAGFRPDSVTFIALLTACN-----------HAGLVAEGLE-------YLGQMQSL 733
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAI 422
G ++ + H M+G G++ EA EL + +P + D WS++
Sbjct: 734 FG------------IKPKLEHYACVVDMLGRA---GRLNEALELVNELPDKPDSRIWSSL 778
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS--ASVASLEKGKDLHGKIIKL 480
+S ++ D+ V N++L G P+K+ + VL ++ A + ++ + + ++ ++
Sbjct: 779 LSSCRNYRDLDIGEKVANKLLELG--PDKAE-NYVLISNFYARLGKWDEVRKMRQRMKEI 835
Query: 481 GFPYDVFLGTALTDTYAK-SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES--- 536
G D G + + K S + + M K + +W + + + + GY ++
Sbjct: 836 GLQKDA--GCSWIEIGGKVSRFLVGDESLLQSM--KIQQTWIELEKKINKIGYKPDTSCV 891
Query: 537 INLFEEMEKTSITPNELTILSVLFA 561
++ EE EK I N L++ F
Sbjct: 892 LHELEEDEKIKILRNHSEKLAISFG 916
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 301/608 (49%), Gaps = 73/608 (12%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
+AQ + +G + NE L++ R+ + F++ P N+ W + G+ Q+
Sbjct: 121 QAQIIANGF-QYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSES 179
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
E + LF ++ ++PN TF + K+C +IN G V + K GF + V +
Sbjct: 180 YREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTT 239
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
LI + G V A +F M +R+VV+WT +++ +I DL ARR+FD PER+ V W
Sbjct: 240 LIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLW 299
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
++M++ Y + G EA +LF +M PN
Sbjct: 300 NIMVSGYIEGGDMVEARKLFXEM------PN----------------------------- 324
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+DV N ++ Y+ G + +F+ + E++ + SWN++IGGY NG E
Sbjct: 325 ----RDVMFWNTVLKGYATNGNVEALEGLFEEMPERN---IFSWNALIGGYAHNGLFFEV 377
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
F M +DV PN +T +VL A A +
Sbjct: 378 LGSFKRMLSESDVP------------------------------PNDATLVTVLSACARL 407
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+L+ GK +H G +V++G AL D YAK G IE++ VF M K+ ISW ++
Sbjct: 408 GALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLI 467
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
GLA +++NLF +M+ P+ +T + +L AC+H GLV+ G YF SM Y I
Sbjct: 468 GGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLI 527
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P HY C+VDML+R+GRL +A F+ MP E D WA LL C+ YKN ++AE A++
Sbjct: 528 MPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQ 587
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L +L ++PA YV+LSNIY AGRW D ++ M + G +K GCS +EV + V F+
Sbjct: 588 RLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFY 647
Query: 705 QKTDHNPK 712
+ +P+
Sbjct: 648 SLDERHPQ 655
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 180/418 (43%), Gaps = 40/418 (9%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK N +I+G +H LIK G ++ T L+ MY +A +I ++ +
Sbjct: 205 VLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERN 264
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES--------- 137
+V MIN I +L A+RLFD PER+ V W ++SG+++ G + E+
Sbjct: 265 VVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPN 324
Query: 138 ----MW------------------YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
W FE P +N+ SW A I G+ NG FE L F ++
Sbjct: 325 RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 384
Query: 176 L-ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
L ES V PN+ T ++ ACA + LG V +G + +V V N+L+ + K G
Sbjct: 385 LSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGI 444
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE----VSWSVMIAR 290
++ A SVF M+ +D++SW ++ +A +F +M + +++ ++
Sbjct: 445 IENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCA 504
Query: 291 YNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
G E+ F F+ M Y P + ++ LA L A V K+ +E
Sbjct: 505 CTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLE---QAXAFVRKMPVEA 561
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
D I L+ + L ++E + + ++ + YG G+ E+ L
Sbjct: 562 DGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARL 619
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 454 FSSVLCASASVASLEKGKDLH---GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
+++ C ++ S + K +H +II GF Y+ ++ L A + +R++FD
Sbjct: 98 LTALRCLRENMRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFD 157
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
++PD N W M RG A+S +E + LF +M+ I PN T VL +C + +
Sbjct: 158 QIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIE 217
Query: 571 GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC 630
G + + + N T ++DM S G + +A M FE + AW S+++G
Sbjct: 218 GEQVHCFLIKC-GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGY 275
Query: 631 KTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI----YASAGRWIDAMNVRKLMTE 682
+ A R L+ LA E V+L NI Y G D + RKL E
Sbjct: 276 ILSADLVSARR----LFDLAPERD---VVLWNIMVSGYIEGG---DMVEARKLFXE 321
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 306/602 (50%), Gaps = 73/602 (12%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
AQ L + +P+ N L+S + + + F + N+ ++ + G
Sbjct: 53 HAQMLINSIPKPN-----FLLSKIIDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWK 107
Query: 165 SFE-ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
++ ++L+ KL G+K N T+ + AC + G L+FKAG + V +
Sbjct: 108 KYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNH 167
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
SLIT+ + GE +G AR++FDEM +R+ VS
Sbjct: 168 SLITMYARCGE-------------------------------MGFARKVFDEMGDRDLVS 196
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W+ MI+ Y++ G+ +EA LF +M F+P+ VL A L L G V VL
Sbjct: 197 WNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVL 256
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE 403
+ +E + ++ +ALID+Y KCG+ +
Sbjct: 257 EKKMEVNSYMGSALIDMYGKCGD----------------------------------LIS 282
Query: 404 AKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
A+ +FD+MP ++ V+W+AII+GY ++ + +FN M +G P++ T VL A ++
Sbjct: 283 ARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACST 342
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
+ +L+ GK + + G +DV++ +AL D YAK G ++ + RVF+ MP KNE+SW M
Sbjct: 343 IGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAM 402
Query: 524 VRGLAESGYAKESINLFEEMEKT--SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
+ LA G A+E+++LF M K ++ PN++T + VL AC H+GLVD+G + F SM
Sbjct: 403 ISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLS 462
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
+ + P HY+C+VD+ +R+G L EA D I MP +PD SLL C+ +N + ER
Sbjct: 463 FGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGER 522
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
++ ++ + YV+ S IYA+ RW D+ +R LM + G+ K+ GCSW+++ VH
Sbjct: 523 VIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVH 582
Query: 702 FF 703
F
Sbjct: 583 EF 584
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 192/414 (46%), Gaps = 74/414 (17%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D V++ +I + G + A+++FD M +R+ VSW ++ISG+ K
Sbjct: 162 DEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKM-------------- 207
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
GF+ EA+ LF+++ E G +P+E+T S+ AC ++ D LG
Sbjct: 208 -----------------GFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRW 250
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V G + + E + + ++LI + K G++ AR VFD M +DVV+W I
Sbjct: 251 VEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAI--------- 301
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
I Y Q+G EA LF M P+ VLSA
Sbjct: 302 ----------------------ITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSA 339
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+++ AL G V H + G++ DV++++ALID+Y+KCG D VF+S+ K+
Sbjct: 340 CSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKN---E 396
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKR------NDVSWSAIISGYLEHKQFDLVFAVF 439
VSWN+MI +GQ +EA LF M K ND+++ ++S + D +F
Sbjct: 397 VSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLF 456
Query: 440 NEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
M LS G +P +S ++ A L + DL K+ G P ++ LG+ L
Sbjct: 457 ESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMP--GKPDEIVLGSLL 508
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
++ G+ H + K G+ + Y+ L+ MY + A ++ ++ DLV N MI+
Sbjct: 144 LVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISG 203
Query: 97 NIQWGNLEEAQRLFDGMPER---------------------------------------N 117
+ G +EA LF M E N
Sbjct: 204 YSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVN 263
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
+ALI + K G + + F+ P ++V++W A I G+ QNG S EA+ LF + E
Sbjct: 264 SYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMRE 323
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
+G P+ VT + AC+ I LG V + G + V V ++LI + K G +D
Sbjct: 324 AGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDD 383
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP------ERNEVSWSVMIARY 291
A VF+ M ++ VSW ++ G EA +F M + N++++ +++
Sbjct: 384 AVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSAC 443
Query: 292 NQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVLSALA 327
+G +E +LF M + P +S ++ A
Sbjct: 444 VHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCA 480
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 29 KDITSQNLVIQGRALHGH----------LIKTGIHKERYLTTRLL-----IMYLGSRKSL 73
KD+ + N +I G A +G + + G H +R +L I L K +
Sbjct: 293 KDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWV 352
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
E + K L D+ V + +I+ + G+L++A R+F+ MP +NEVSW A+IS HG+
Sbjct: 353 ETHASEKGLQ-HDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQ 411
Query: 134 VEESMWYFER------NPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGVKPNEVT 186
+E++ F R N I++ + V G E +LF + L G+ P
Sbjct: 412 AQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEH 471
Query: 187 FSSICKACA 195
+S + CA
Sbjct: 472 YSCMVDLCA 480
>gi|242092962|ref|XP_002436971.1| hypothetical protein SORBIDRAFT_10g012871 [Sorghum bicolor]
gi|241915194|gb|EER88338.1| hypothetical protein SORBIDRAFT_10g012871 [Sorghum bicolor]
Length = 726
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 318/644 (49%), Gaps = 77/644 (11%)
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
+ F+ ++ +SW A + G + G +AL ++ SG E TF+S+ ACA
Sbjct: 70 YLFDGTRHRDAVSWNAMVSGHARRGNVPDALGTAARMHSSGQPFTEATFASVVGACARGR 129
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
FR G G + K+G E + SL+ ++ R++F+ + +R+ + W+ ++
Sbjct: 130 MFRAGTQAHGQVIKSGCEGSAVIGASLLDFYSSCFDLRATRALFESLHQRNELLWSPMVV 189
Query: 259 VFIEMGDLGEARRIFDEMPERNEV-SWSVMIARYNQSGYPE---EAFRLF-RQMTRYSFK 313
+ G L EA + P R +V +W+ +I+ Y + G + +A +LF + +
Sbjct: 190 ALVRFGLLAEALDLLQITPARRDVFAWTAVISGYAK-GTDQCCGKALQLFVKLLADDGAM 248
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS----------- 362
PN + VL A L AL G VH +++ G + I++AL+DLY
Sbjct: 249 PNEYTYDCVLRACVRLGALDFGRSVHGCLIRCGFWCEQLITSALVDLYCTSDALDDALLV 308
Query: 363 --------------------KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
G T+D ++VF + E+D S+N MI Y + G++E
Sbjct: 309 YNDLDRPPLITSNTLIAGLISIGRTEDAKMVFSQMPEQDSG---SYNLMIKAYAMEGKLE 365
Query: 403 EAKELFDNMPKRN--------------------------------DVSWSAIISGYLEHK 430
+ +F+ MPKRN V+W+++ISGY+++
Sbjct: 366 HCRRMFEKMPKRNMVSLNSMMSVLLQNGRLEEGLKLFKQIKDERDTVTWNSMISGYIQND 425
Query: 431 QFDLVFAVFNEM--LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ +F M L G P STFS++L A A++ +LE+G+ +H + K F + +
Sbjct: 426 EPSEALKLFVVMCRLYIGCSP--STFSALLHACATIGTLEQGRMIHAHLCKTSFDSNGHV 483
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GTAL D Y K G + +R F + N SWT +V GLA++G E++ F M K +
Sbjct: 484 GTALADMYFKCGCVIDARSAFTYVTSPNVASWTCLVNGLAQNGLWLEALLQFGRMLKHHV 543
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+PNE+T L +L A + +GLV+KG+K F SME + + P +HYTC VD+L R+G EAE
Sbjct: 544 SPNEITFLGLLMASARAGLVNKGMKIFYSMEN-FGLVPTVQHYTCAVDLLGRTGHTREAE 602
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
FI MP D W +LL+ C + ++ E+ + L+ + +H + YV +SNIYA G
Sbjct: 603 KFIYEMPLPADGIIWEALLTACWYSVDLEMGEKVAQRLFLMGTKHRSAYVAMSNIYAKLG 662
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+W D + VR M +K GCSW+E+++ VH F ++P+
Sbjct: 663 KWEDVVKVRTQMRSLNEKKEPGCSWIEIKDIVHIFLVDDQNHPE 706
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 178/368 (48%), Gaps = 18/368 (4%)
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT-SCFSIVLSA 325
G R +FD R+ VSW+ M++ + + G +A +M S +P T + F+ V+ A
Sbjct: 66 GRTRYLFDGTRHRDAVSWNAMVSGHARRGNVPDALGTAARM-HSSGQPFTEATFASVVGA 124
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A + R+G H V+K G E I +L+D YS C + + R +F+S+ +++
Sbjct: 125 CARGRMFRAGTQAHGQVIKSGCEGSAVIGASLLDFYSSCFDLRATRALFESLHQRN---E 181
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLE--HKQFDLVFAVFNEM 442
+ W+ M+ G + EA +L P R DV +W+A+ISGY + + +F ++
Sbjct: 182 LLWSPMVVALVRFGLLAEALDLLQITPARRDVFAWTAVISGYAKGTDQCCGKALQLFVKL 241
Query: 443 LL-SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
L G +PN+ T+ VL A + +L+ G+ +HG +I+ GF + + +AL D Y S
Sbjct: 242 LADDGAMPNEYTYDCVLRACVRLGALDFGRSVHGCLIRCGFWCEQLITSALVDLYCTSDA 301
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
++ + V++ + I+ ++ GL G +++ +F +M + L I A
Sbjct: 302 LDDALLVYNDLDRPPLITSNTLIAGLISIGRTEDAKMVFSQMPEQDSGSYNLMIK----A 357
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
+ G ++ + F M K N ++ +L ++GRL E + E D+
Sbjct: 358 YAMEGKLEHCRRMFEKMP-----KRNMVSLNSMMSVLLQNGRLEEGLKLFKQIKDERDTV 412
Query: 622 AWASLLSG 629
W S++SG
Sbjct: 413 TWNSMISG 420
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 185/427 (43%), Gaps = 39/427 (9%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C+L+ + GR++HG LI+ G E+ +T+ L+ +Y S +A + DL+
Sbjct: 256 CVLRACVRLGALDFGRSVHGCLIRCGFWCEQLITSALVDLYCTSDALDDALLVYNDLDRP 315
Query: 86 DLVV-------------------------------HNCMINANIQWGNLEEAQRLFDGMP 114
L+ +N MI A G LE +R+F+ MP
Sbjct: 316 PLITSNTLIAGLISIGRTEDAKMVFSQMPEQDSGSYNLMIKAYAMEGKLEHCRRMFEKMP 375
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFER-NPFQNVISWTAAICGFVQNGFSFEALKLFL 173
+RN VS +++S +++GR+EE + F++ ++ ++W + I G++QN EALKLF+
Sbjct: 376 KRNMVSLNSMMSVLLQNGRLEEGLKLFKQIKDERDTVTWNSMISGYIQNDEPSEALKLFV 435
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
+ + + TFS++ ACA I G + + K F+ + V +L + K G
Sbjct: 436 VMCRLYIGCSPSTFSALLHACATIGTLEQGRMIHAHLCKTSFDSNGHVGTALADMYFKCG 495
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIA 289
V ARS F + +V SWT +++ + G EA F M + NE+++ ++
Sbjct: 496 CVIDARSAFTYVTSPNVASWTCLVNGLAQNGLWLEALLQFGRMLKHHVSPNEITFLGLLM 555
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
++G + ++F M + P ++ + L R + ++ +
Sbjct: 556 ASARAGLVNKGMKIFYSMENFGLVPTVQHYTCAVDLLGRTGHTREA---EKFIYEMPLPA 612
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D I AL+ + + G V + H ++ +M Y G+ E+ ++
Sbjct: 613 DGIIWEALLTACWYSVDLEMGEKVAQRLFLMGTKHRSAYVAMSNIYAKLGKWEDVVKVRT 672
Query: 410 NMPKRND 416
M N+
Sbjct: 673 QMRSLNE 679
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 303/617 (49%), Gaps = 65/617 (10%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L+ C ++A + G L A+RLFD +PE + + L+
Sbjct: 48 LIASYCTLSAGDRDGGLCHARRLFDRIPEPDRFMYNTLVR-------------------- 87
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+++ + C EAL+L +L+ G+ PNE T + KAC + L+
Sbjct: 88 ----AYSNSDC-------PQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAA 136
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G++ K GF + + V N+L+ G + +R F M R+VVSW ++ + + G++
Sbjct: 137 HGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEV 196
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
EA +F EM G + F L +L A
Sbjct: 197 SEACALFGEM---------------RHQGLLADVFTLVS----------------LLFAC 225
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
+S L G VH H+L G D + NAL+D+Y KCG+ FD + K+ VV
Sbjct: 226 SSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKN---VV 282
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
+W SM+ +G ++ ++ F+ MP+RN VSW+A+IS Y++ + ++N M G
Sbjct: 283 TWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLG 342
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
P++ T + VL A L GK +H + V L +L D YA+ G ++++
Sbjct: 343 ITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAI 402
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+F MP+KN ISW V++ LA G A+E++ F M + +P+E+T + +L ACSH G
Sbjct: 403 GLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGG 462
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
L++ G YF +M +YN++P HY C+VD+L R G L++A + I M +PD W +L
Sbjct: 463 LLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGAL 522
Query: 627 LSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLR 686
L C+ + N +I + +K L +L +VL+ N++ +W D +RKLM E+G +
Sbjct: 523 LGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTK 582
Query: 687 KSGGCSWVEVRNQVHFF 703
K G S +EV+N +H F
Sbjct: 583 KDMGVSSIEVKNIIHEF 599
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 216/502 (43%), Gaps = 101/502 (20%)
Query: 72 SLEANEIVKDLNGF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFM 129
+L A+ +V L GF + V N +++ + G+L +++R F M +RN VSW +I G+
Sbjct: 133 ALAAHGVVVKL-GFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYA 191
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
+ G V EA LF ++ G+ + T S
Sbjct: 192 QAGEVS-------------------------------EACALFGEMRHQGLLADVFTLVS 220
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ AC+ + +G V + +G + N+L+ + K G++ +A FD M ++
Sbjct: 221 LLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKN 280
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
VV+WT +L + G + R F++MPERN VSW+ MI+ Y Q G E L+ +M
Sbjct: 281 VVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRS 340
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
P+ + VLSA L SG +H +V + V + N+L+D+Y++CG+
Sbjct: 341 LGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDT 400
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
+F + K+ V+SWN +IG ++G+ +E F M
Sbjct: 401 AIGLFTEMPNKN---VISWNVIIGALAMHGRAQETVTFFRTM------------------ 439
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
V F+ P++ TF +L A + HG +++ G Y
Sbjct: 440 -----VSDAFS--------PDEITFVGLLSACS-----------HGGLLEAGEYY----- 470
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
E+ RV++ P+ + MV L G+ +++NL ++M SI
Sbjct: 471 ------------FEAMARVYNVEPEVEH--YGCMVDLLGRRGHLAKAVNLIKDM---SIK 513
Query: 550 PNELTILSVLFACSHSGLVDKG 571
P+ + ++L AC G V+ G
Sbjct: 514 PDVVVWGALLGACRIHGNVEIG 535
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 67/385 (17%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + LL +S+ + GR +H H++ +G +R L LL MY
Sbjct: 217 TLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMY---------------- 260
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+ G+L A R FD MP +N V+WT+++ KHG V+ +FE
Sbjct: 261 ---------------GKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFE 305
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ P +N++SW A I +VQ G E L L+ ++ G+ P+E T + + AC + D
Sbjct: 306 QMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLAS 365
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + + + V++ NSL+ + + G+VD A +F M ++V+SW VI
Sbjct: 366 GKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVI------ 419
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
I G +E FR M +F P+ F +
Sbjct: 420 -------------------------IGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGL 454
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGE-TKDGRLVFDSIVEK 380
LSA + L +G + + ++ +E +V ++DL + G K L+ D ++
Sbjct: 455 LSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKP 514
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAK 405
D VV W +++G ++G +E K
Sbjct: 515 D---VVVWGALLGACRIHGNVEIGK 536
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA------KSGDIESSRRVFDRMPDKNEIS 519
S++ +H ++ GF + + L +Y + G + +RR+FDR+P+ +
Sbjct: 22 SIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIPEPDRFM 81
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
+ +VR + S +E++ L + + I PNE T+ VL AC+ V+ L
Sbjct: 82 YNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHAL 134
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 300/583 (51%), Gaps = 64/583 (10%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TA + F+K V+ + FER P ++ +W A + GF Q+G + +A LF ++ + +
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ VT ++ ++ + +L ++ + + G + V+V N+ I+ K G++D A+ V
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+ +++ D R VSW+ M Y+ G +AF
Sbjct: 211 FEAIDRGD-----------------------------RTVVSWNSMFKAYSVFGEAFDAF 241
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
L+ M R FKP+ S F + ++ + + L G +H+H + +G ++D+ N I +Y
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMY 301
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
SK +T RL LFD M R VSW+
Sbjct: 302 SKSEDTCSARL----------------------------------LFDIMTSRTCVSWTV 327
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+ISGY E D A+F+ M+ SGE P+ T S++ SLE GK + + G
Sbjct: 328 MISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG 387
Query: 482 FPYD-VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D V + AL D Y+K G I +R +FD P+K ++WT M+ G A +G E++ LF
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+M PN +T L+VL AC+HSG ++KG +YF+ M+ +YNI P HY+C+VD+L R
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
G+L EA + I +M +PD+ W +LL+ CK ++N +IAE+A ++L+ L + A YV +
Sbjct: 508 KGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEM 567
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
+NIYA+AG W +R +M ++ ++K G S ++V + H F
Sbjct: 568 ANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSF 610
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 226/485 (46%), Gaps = 66/485 (13%)
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+V +W I V E+L LF ++ G +PN TF + KACA + D
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD------ 67
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V C +M L +S F DV T +D+F++
Sbjct: 68 -------------VGCC--------EMVHAHLIKSPF----WSDVFVGTATVDMFVKCNS 102
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ A ++F+ MPER+ +W+ M++ + QSG+ ++AF LFR+M P++ ++ +
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ K+L+ +HA +++G++ V ++N I Y KCG+ +LVF++I D V
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRT-V 221
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWNSM Y + G E FD F ++ ML
Sbjct: 222 VSWNSMFKAYSVFG------EAFD-------------------------AFGLYCLMLRE 250
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P+ STF ++ + + +L +G+ +H I LG D+ Y+KS D S+
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
R +FD M + +SWTVM+ G AE G E++ LF M K+ P+ +T+LS++ C
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 566 GLVDKGLKYFNSMEPIYNIK-PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
G ++ G K+ ++ IY K N ++DM S+ G + EA D ++ P E W
Sbjct: 371 GSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWT 428
Query: 625 SLLSG 629
++++G
Sbjct: 429 TMIAG 433
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 96/243 (39%), Gaps = 40/243 (16%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
L+ + F + T + L + + QGR +H H I G ++ + MY
Sbjct: 243 LYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE----VSWTA 123
S + A + + V MI+ + G+++EA LF M + E V+ +
Sbjct: 303 KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 124 LISGFMKHGRVEESMWY------------------------------------FERNPFQ 147
LISG K G +E W F+ P +
Sbjct: 363 LISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK 422
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
V++WT I G+ NG EALKLF K+++ KPN +TF ++ +ACA G F
Sbjct: 423 TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYF 482
Query: 208 GLI 210
++
Sbjct: 483 HIM 485
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 163/432 (37%), Positives = 252/432 (58%), Gaps = 3/432 (0%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A R+F + ++ W+ M+ + + AF L++ M ++ PN FS V+ A
Sbjct: 65 AERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACID 124
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ L+ G+ H V+K G E F+ N LI LY+ CG R +FD +++DV V+W
Sbjct: 125 VFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDV---VTW 181
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
+I GY +GQ+ A+ELFD MP++N VSW A+I+GY+ F VF +M +SG
Sbjct: 182 TCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFR 241
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
N+++ L A A + +L++G+ +H + + D LGTAL D YAK G IE + V
Sbjct: 242 LNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSV 301
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
FD M D++ ++T ++ GLA ++ +I+LF M+ + PNE+T + VL ACS G+V
Sbjct: 302 FDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMV 361
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
D+GL+ F SM Y I+P +HY C+VD+L R+G++ EA+ + MP +PDS +LL
Sbjct: 362 DEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLD 421
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+ + + Q+ E V +L + +H +VLLSN+YASA +W DA +RK M +K +RK
Sbjct: 422 ACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKL 481
Query: 689 GGCSWVEVRNQV 700
GCS +EV V
Sbjct: 482 PGCSSIEVNGTV 493
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 203/427 (47%), Gaps = 42/427 (9%)
Query: 122 TALISGFMKHGRVEESMWYFERN--PFQN--VISWTAAICGFVQNGFSFEALKLFLKLLE 177
A I H S++Y ER QN W + FV+ + A L+ +LE
Sbjct: 46 AAKIISLHAHSNARSSLFYAERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLE 105
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
S PN TFS + +AC ++ + ++GL G + K G+E + V N LI L G +DL
Sbjct: 106 SNYLPNNFTFSFVIRACIDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDL 165
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
AR++FD KRDVV+WT ++ ++ G + AR +FD MPE+N VSW +IA Y + G+
Sbjct: 166 ARNMFDMSIKRDVVTWTCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFF 225
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+EA +F M F+ N + L+A A L AL G +HA+V + + D + AL
Sbjct: 226 KEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTAL 285
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
ID+Y+KCG +E A +FD M R+
Sbjct: 286 IDMYAKCG----------------------------------CIEMACSVFDEMDDRDVY 311
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
+++ +ISG H + + +FN M G +PN+ TF VL A + + +++G + +
Sbjct: 312 AFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESM 371
Query: 478 I-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
+ + L D ++G IE +++V MP + + S+T + L ++
Sbjct: 372 SNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPD-SYT--LGALLDACRVHGD 428
Query: 537 INLFEEM 543
+ L EEM
Sbjct: 429 VQLGEEM 435
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 160/332 (48%), Gaps = 8/332 (2%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
V N +I+ G ++ A+ +FD +R+ V+WT LISG++ G+V + F+R P +N
Sbjct: 149 VQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQVLIARELFDRMPEKN 208
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+SW A I G+V+ GF EAL++F + SG + N + ACA + G +
Sbjct: 209 PVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWIHA 268
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ + + +LI + K G +++A SVFD M+ RDV ++T ++
Sbjct: 269 YVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCLISGLANHDKSEA 328
Query: 269 ARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIVL 323
A +F+ M + NEV++ ++ ++ G +E R+F M+ RY +P + ++
Sbjct: 329 AIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGCLV 388
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
L + V V ++ ++ D + AL+D G+ + G + DS+V++ +
Sbjct: 389 DLLGRAGKIEEAKQV---VREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCLD 445
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
H + Y + E+A ++ M +N
Sbjct: 446 HGGVHVLLSNMYASADKWEDASKIRKKMEDKN 477
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 113/288 (39%), Gaps = 67/288 (23%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QGR +H ++ + + +R L T L+ MY
Sbjct: 262 QGRWIHAYVKRHHMSLDRMLGTALIDMY-------------------------------A 290
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ G +E A +FD M +R+ ++T LISG H + E
Sbjct: 291 KCGCIEMACSVFDEMDDRDVYAFTCLISGLANHDKSE----------------------- 327
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEK 217
A+ LF ++ + GV PNEVTF + AC+ + GL +F + + E
Sbjct: 328 --------AAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEP 379
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ L+ L + G+++ A+ V M + D + +LD GD+ + D +
Sbjct: 380 QIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSL 439
Query: 277 PER--NEVSWSVMIAR-YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
+R + V+++ Y + E+A ++ ++M + + C SI
Sbjct: 440 VQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSI 487
>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 178/526 (33%), Positives = 280/526 (53%), Gaps = 37/526 (7%)
Query: 187 FSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME 246
FS + +AC + R L F A ++ + N L+ +G++ AR +F+R+
Sbjct: 47 FSHLFRACRALRPLR-QLHAFAATSGAATDRFTA--NHLMLAYADLGDLTAARELFERIP 103
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+R+V+SW ++ +I+ GDLG AR++FDEMPERN +W+ M+A G+ EE+ LF
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLD 163
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R P+ V A L+ + +G VHA+V++ G+++D+ + ++L +Y +CG
Sbjct: 164 MRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
++G V + +VS N++I G NG E G
Sbjct: 224 LQEGEAVLRMLPS---LSIVSCNTIIAGRTQNGDSE----------------------GA 258
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
LE+ F M G + TF S + + + +A+L +G+ +HG+++K G V
Sbjct: 259 LEY---------FCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVV 309
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ T L Y++ G + S RVF + + M+ G+ +++I LF++M
Sbjct: 310 PVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNG 369
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
P+++T L++L+ACSHSGL ++G+ F M Y I+P+ +HYTCVVD+L RSG L E
Sbjct: 370 GAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDE 429
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE I SMP PD W +LLS CKT KN +AER K + +L A YVLLSNI A+
Sbjct: 430 AEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRAT 489
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ RW D VRK M + +RK G SWVE++ +H F + +P+
Sbjct: 490 SRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPR 535
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 177/429 (41%), Gaps = 66/429 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D N ++ A G+L A+ LF+ +P RN +SW L G++K+G + + F+ P
Sbjct: 75 DRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP 134
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+NV +W A + G GF E+L LFL + G+ P+E S+ + CA + D G
Sbjct: 135 ERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAGLRDVVTGRQ 194
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V + ++G ++ + V +SL + ++ G
Sbjct: 195 VHAYVVRSGLDRDMCVGSSLAHM-------------------------------YMRCGC 223
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L E + +P + VS + +IA Q+G E A F M + F +S+
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L AL G +H V+K G++K V + L+ +YS+CG D VF D
Sbjct: 284 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSD---T 340
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
++MI YG +G ++A EL F +M+
Sbjct: 341 FLLSAMISAYGFHGHGQKAIEL-------------------------------FKQMMNG 369
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL-GFPYDVFLGTALTDTYAKSGDIES 504
G P+ TF ++L A + E+G D + K G V T + D +SG ++
Sbjct: 370 GAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDE 429
Query: 505 SRRVFDRMP 513
+ + MP
Sbjct: 430 AEALILSMP 438
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 35/320 (10%)
Query: 5 LRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI 64
+RS+ +F S I +C D+ + + QG+ +HG ++K G+ K + T L+
Sbjct: 265 MRSVGVAADVVTFVSAISSC----SDLAA---LAQGQQIHGQVMKAGVDKVVPVMTCLVH 317
Query: 65 MYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF----DGMPERNEVS 120
MY ++ + G D + + MI+A G+ ++A LF +G E ++V+
Sbjct: 318 MYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVT 377
Query: 121 WTALISGFMKHGRVEESMWYFE-----RNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+ AL+ G EE M FE +V +T + ++G EA L L +
Sbjct: 378 FLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDEAEALILSM 437
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT----LSLK 231
+ P+ V + ++ AC +F + + + + + H S L++ S +
Sbjct: 438 ---PLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE--LDPHDSASYVLLSNIRATSRR 492
Query: 232 MGEVDLARSVF--DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV--M 287
G+V R + + K VSW V L I G+ + P + E+ + M
Sbjct: 493 WGDVSEVRKAMRDNNVRKEPGVSW-VELKGHIHQFCTGD-----ESHPRQKEIDECLEEM 546
Query: 288 IARYNQSGYPEEAFRLFRQM 307
+A+ Q GY + + M
Sbjct: 547 MAKIRQCGYSPDMSMVLHDM 566
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 285/491 (58%), Gaps = 8/491 (1%)
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+E+ V+ N++++ K A+ +FD M +R+V++WT ++ + ++ DL ARR FD
Sbjct: 159 YERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFD 218
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
MPER+ VSW+ M++ Y Q+G EE RLF +M +P+ + + V+SA +S
Sbjct: 219 CMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCL 278
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
+ + + I+ + F+ AL+D+Y+KCG R +FD + + V+WN+MI
Sbjct: 279 AASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDEL--GAYRNSVTWNAMISA 336
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKST 453
Y G ++ A+ELF+ MP RN V+W+++I+GY ++ Q + +F EM+ + ++ P++ T
Sbjct: 337 YTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 396
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
SV+ A + +LE G + + + + A+ Y++ G +E ++RVF M
Sbjct: 397 MVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 456
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
++ +S+ ++ G A G+ E+INL M++ I P+ +T + VL ACSH+GL+++G K
Sbjct: 457 TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK 516
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
F S++ P HY C+VD+L R G L +A+ + MP EP + + SLL+ + +
Sbjct: 517 VFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIH 571
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
K ++ E A L++L ++ ++LLSNIYASAGRW D +R+ M + G++K+ G SW
Sbjct: 572 KQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSW 631
Query: 694 VEVRNQVHFFF 704
VE ++H F
Sbjct: 632 VEYGGKLHKFI 642
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 238/478 (49%), Gaps = 42/478 (8%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVH--NCMINAN 97
G H H++K G + ++ ++ MY A ++ ++ ++ V N M++
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
+W + +AQ LFD MPERN ++WTA+++G+ K +E + YF+ P ++V+SW A +
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G+ QNG + E L+LF +++ +G++P+E T+ ++ AC+ D L S+ + + +
Sbjct: 234 GYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL 293
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ V +L+ + K G + AR +FD + R+ V+W ++ + +G+L AR +F+ M
Sbjct: 294 NCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTM 353
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSG 335
P RN V+W+ MIA Y Q+G A LF++M T P+ V+SA L AL G
Sbjct: 354 PGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG 413
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
V + + I+ + NA+I +YS+CG +D + VF + +D VVS+N++I G+
Sbjct: 414 NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD---VVSYNTLISGF 470
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+G EA L M + G P++ TF
Sbjct: 471 AAHGHGVEAINLMSTMKE-------------------------------GGIEPDRVTFI 499
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
VL A + LE+G+ + I + + D + G++E ++R +RMP
Sbjct: 500 GVLTACSHAGLLEEGRKVFESIKDPAIDHY----ACMVDLLGRVGELEDAKRTMERMP 553
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 162/367 (44%), Gaps = 77/367 (20%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE-RNEVSWTALISGFM 129
++L +I LN F V +++ + G++ A+R+FD + RN V+W A+IS +
Sbjct: 284 RTLHQKQI--QLNCF---VRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYT 338
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFS 188
+ G ++ + F P +NV++W + I G+ QNG S A++LF +++ + + P+EVT
Sbjct: 339 RVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMV 398
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
S+ AC + LG V + + + +S N++I + + G ++ A+ VF M R
Sbjct: 399 SVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR 458
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
DVV S++ +I+ + G+ EA L M
Sbjct: 459 DVV-------------------------------SYNTLISGFAAHGHGVEAINLMSTMK 487
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
+P+ F VL+A + HA +L +
Sbjct: 488 EGGIEPDRVTFIGVLTACS-----------HAGLL------------------------E 512
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS-WSAIISGYL 427
+GR VF+SI + + H + M+ G G++E+AK + MP + ++++
Sbjct: 513 EGRKVFESIKDPAIDH---YACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASR 569
Query: 428 EHKQFDL 434
HKQ +L
Sbjct: 570 IHKQVEL 576
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 128/339 (37%), Gaps = 72/339 (21%)
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG--LNGQMEEAKELFDNMPKR 414
L + S+ G R + I+ + H W +++ + L LF++
Sbjct: 4 LGSIASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNP 63
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLH 474
N +++++ Y + V +F M G P+ + +L SA G H
Sbjct: 64 NVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYP-ILIKSAG----NGGIGFH 118
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD-------------------- 514
++KLG D F+ A+ D YA+ G I +R+VFD +PD
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES 178
Query: 515 -------------KNEISWTVMVRGLAE--------------------------SGYAK- 534
+N I+WT MV G A+ SGYA+
Sbjct: 179 EGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQN 238
Query: 535 ----ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
E + LF+EM I P+E T ++V+ ACS G ++ I+ N
Sbjct: 239 GLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQ-KQIQLNCFV 297
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
T ++DM ++ G + A + + +S W +++S
Sbjct: 298 RTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISA 336
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
A+I + + G +E++ F+ ++V+S+ I GF +G EA+ L + E G++P
Sbjct: 434 AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEP 493
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ VTF + AC+ G VF I + + ++ L ++GE++ A+
Sbjct: 494 DRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYA----CMVDLLGRVGELEDAKRTM 549
Query: 243 DR--MEKRDVVSWTVI----LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
+R ME V +++ + +E+G+L A ++F+ P+ N ++ ++ Y +G
Sbjct: 550 ERMPMEPHAGVYGSLLNASRIHKQVELGELA-ANKLFELEPD-NSGNFILLSNIYASAGR 607
Query: 297 PEEAFRLFRQMTRYSFKPNT 316
++ R+ M + K T
Sbjct: 608 WKDVERIREAMKKGGVKKTT 627
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 272/516 (52%), Gaps = 39/516 (7%)
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR----SVFDRMEKRDVVSWTVI 256
+ GL V LI E ++ N+L+ ++G++ + V + K D+V +
Sbjct: 56 KTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSL 115
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
L ++ G L ARR+FDEMP R+ VSW+ MI Y Q+ +A LF +M +PN
Sbjct: 116 LFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNE 175
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
S ++ + + G +HA K G +VF+ ++L+D+Y++CG
Sbjct: 176 FTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCG----------- 224
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ EA +FD + +N+VSW+A+I+GY + +
Sbjct: 225 -----------------------YLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEAL 261
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
A+F M G P + T+S++L + +S+ LE+GK LH ++K ++G L Y
Sbjct: 262 ALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMY 321
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
AKSG I + +VFD++ + +S M+ G A+ G KE+ F+EM + I PN++T L
Sbjct: 322 AKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFL 381
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
SVL ACSH+ L+D+G YF M YNI+P HY +VD+L R+G L +A+ FI MP
Sbjct: 382 SVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPI 440
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
EP W +LL K +KN ++ A + +++L +P + LL+NIYASAGRW D V
Sbjct: 441 EPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKV 500
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
RK+M + G++K CSWVEV N VH F +P+
Sbjct: 501 RKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQ 536
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 189/428 (44%), Gaps = 96/428 (22%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
DLV+ N ++ + G+LE A+RLFD MP R
Sbjct: 108 DLVIQNSLLFMYARCGSLEGARRLFDEMPHR----------------------------- 138
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+++SWT+ I G+ QN + +AL LF ++L G +PNE T SS+ K C + + G
Sbjct: 139 --DMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQ 196
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ +K G +V V +SL+ + + G + A VFD++ ++ VSW
Sbjct: 197 IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSW------------ 244
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ +IA Y + G EEA LF +M R ++P +S +LS+
Sbjct: 245 -------------------NALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSS 285
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+S+ L G +HAH++K + ++ N L+ +Y+K G +D VFD +V+ D V
Sbjct: 286 CSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVD---V 342
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS NSM+ GY +G +EA + FD EM+
Sbjct: 343 VSCNSMLIGYAQHGLGKEAAQQFD-------------------------------EMIRF 371
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
G PN TF SVL A + L++GK G + K V + D ++G ++ +
Sbjct: 372 GIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQA 431
Query: 506 RRVFDRMP 513
+ + MP
Sbjct: 432 KSFIEEMP 439
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 120/298 (40%), Gaps = 70/298 (23%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LL +S + QG+ LH HL+K+ Y+ LL MY S
Sbjct: 282 LLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKS----------------- 324
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
G++ +A+++FD + + + VS +++ G+ +HG +E+ F+
Sbjct: 325 --------------GSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFD---- 366
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+++ G++PN++TF S+ AC+ G
Sbjct: 367 ---------------------------EMIRFGIEPNDITFLSVLTACSHARLLDEGKHY 399
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-WTVILDVF----- 260
FGL+ K E VS +++ L + G +D A+S + M V+ W +L
Sbjct: 400 FGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKN 459
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
EMG A+R+F E+ + +++ Y +G E+ ++ + M K +C
Sbjct: 460 TEMGAYA-AQRVF-ELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPAC 515
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 212/735 (28%), Positives = 351/735 (47%), Gaps = 126/735 (17%)
Query: 61 RLLIMYLGSRKSLEANEIVKDLN----GFDLVVHNCMINA-----NIQWGNLEEAQRLFD 111
RLL + + EA + KDL+ G D + +C + + G Q L
Sbjct: 74 RLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKS 133
Query: 112 GMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKL 171
G E V T+L+ +MK E+ F+ +NV+SWT+ + G+ +NG + E + L
Sbjct: 134 GFLEDVSVG-TSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHL 192
Query: 172 FLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
++ GV PN TF+++ A A+ + G+ V +I K GFE VCN+LI + LK
Sbjct: 193 INQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLK 252
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM--------------- 276
V A +VFD M RD V+W +++ + +G E ++F M
Sbjct: 253 SEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTA 312
Query: 277 ----PERNEVSW--------------------SVMIARYNQSGYPEEAFRLFR------- 305
++ E+++ + ++ Y++ +EAF+LF
Sbjct: 313 LKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHN 372
Query: 306 -------------------------QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
QM+R +PN +S VL+ S +L S +HA
Sbjct: 373 VVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPS--SLLS--QLHA 428
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
++K EK ++ AL+D Y K G + VF SI KD +V+W++M+ G
Sbjct: 429 QIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD---IVAWSAMLTGLAQTRD 485
Query: 401 MEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
E+A E+F + K N+ ++S++I+
Sbjct: 486 SEKAMEVFIQLVKEGVKPNEYTFSSVINA------------------------------- 514
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
S+S A++E GK +H +K G + + +AL Y+K G+IES+ +VF R +++
Sbjct: 515 ---CSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERD 571
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW M+ G + G AK+++ +F+ M+ + +++T + VL AC+H+GLV++G KYFN
Sbjct: 572 IVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFN 631
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
M Y+I HY+C+VD+ SR+G +A D IN MPF W +LL+ C+ ++N
Sbjct: 632 IMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNL 691
Query: 637 QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEV 696
++ + A + L L GYVLLSNI+A AG W + +VRKLM E+ ++K GCSW+E+
Sbjct: 692 ELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEI 751
Query: 697 RNQVHFFFQKTDHNP 711
+N++ F +P
Sbjct: 752 KNRIFSFLAGDVSHP 766
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 251/549 (45%), Gaps = 87/549 (15%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +++ + + F +N EAL LF L SG+ + +T S K C + D
Sbjct: 61 FDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQ 120
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G V K+GF + VSV SL+ D++
Sbjct: 121 VVGRQVHCQSLKSGFLEDVSVGTSLV-------------------------------DMY 149
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
++ D + R IFDEM +N VSW+ +++ Y ++G +E L QM PN F+
Sbjct: 150 MKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFA 209
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
VL ALA + G+ VHA ++K G E F+ NALI +Y K D VFDS+V +
Sbjct: 210 TVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVR 269
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
D V+WN MIGGY A I YLE F +F+
Sbjct: 270 D---SVTWNIMIGGY-------------------------AAIGFYLEG------FQMFH 295
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M L+G +++ F + L + L K LH ++K G+ + + TAL TY+K
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 501 DIESSRRVFDRMPD--KNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
++ + ++F M D N ++WT M+ G ++ K++++LF +M + + PN T +V
Sbjct: 356 SVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L A S L+ + + ++ Y P+ T ++D ++G + E+ S+P +
Sbjct: 415 L-AGKPSSLLSQ--LHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK- 468
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE--HPAGYVLLSNIYASA--------G 668
D AW+++L+G ++ +E+A++ +L +E P Y S I A + G
Sbjct: 469 DIVAWSAMLTGLAQTRD---SEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525
Query: 669 RWIDAMNVR 677
+ I A V+
Sbjct: 526 KQIHATAVK 534
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 193/444 (43%), Gaps = 83/444 (18%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L + ++++ G +H ++K G ++ L+ MYL S +A + + D
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRD 270
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM-------------------PERNEVSW------ 121
V N MI G E ++F M ++ E+++
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHC 330
Query: 122 --------------TALISGFMKHGRVEESMWYFE-RNPFQNVISWTAAICGFVQNGFSF 166
TAL+ + K V+E+ F + NV++WTA I GFVQN +
Sbjct: 331 GVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNK 390
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
+A+ LF ++ GV+PN T+S++ L + I KA +EK SV +L+
Sbjct: 391 KAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVPSVATALL 446
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+K G V + VF + +D+V+W S
Sbjct: 447 DAYVKTGNVVESARVFYSIPAKDIVAW-------------------------------SA 475
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA-LRSGMHVHAHVLKI 345
M+ Q+ E+A +F Q+ + KPN FS V++A +S A + G +HA +K
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS 535
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G + +S+AL+ +YSK G + VF E+D +VSWNSMI GYG +G ++A
Sbjct: 536 GKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERD---IVSWNSMITGYGQHGDAKKAL 592
Query: 406 ELFDNMPKR----NDVSWSAIISG 425
E+F M + +DV++ +++
Sbjct: 593 EVFQIMQNQGLPLDDVTFIGVLTA 616
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 185/446 (41%), Gaps = 79/446 (17%)
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++FDE P ++ ++ ++ ++++ + EA LF+ + + S L
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L G VH LK G +DV + +L+D+Y K + +DGR +FD E + +VVSW
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFD---EMGIKNVVSW 173
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
S++ GY NG +E V + N+M + G
Sbjct: 174 TSLLSGYARNGLNDE-------------------------------VIHLINQMQMEGVN 202
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN TF++VL A A + +E G +H I+K GF + F+ AL Y KS + + V
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS----- 563
FD M ++ ++W +M+ G A G+ E +F M + + + L CS
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 564 ------HSGL------------------------VDKGLKYFNSMEPIYNIKPNGRHYTC 593
H G+ VD+ K F+ + +N+ +T
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVT----WTA 378
Query: 594 VVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
++ ++ +A D M E P+ ++++L+G + Q+ + +K +
Sbjct: 379 MIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYY--- 435
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNV 676
E+ P+ L + Y G +++ V
Sbjct: 436 EKVPSVATALLDAYVKTGNVVESARV 461
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 164/344 (47%), Gaps = 31/344 (9%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
TAL+ ++K G V ES F P +++++W+A + G Q S +A+++F++L++ GVK
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVK 502
Query: 182 PNEVTFSSICKAC-AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
PNE TFSS+ AC + G + K+G + V ++L+T+ K G ++ A
Sbjct: 503 PNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEK 562
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGY 296
VF R E+RD+VSW ++ + + GD +A +F M + ++V++ ++ +G
Sbjct: 563 VFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGL 622
Query: 297 PEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
EE + F M + Y +S ++ + R+GM A + G+ F ++
Sbjct: 623 VEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYS-----RAGMFDKAMDIINGMP---FPAS 674
Query: 356 ALI--DLYSKCGETKD---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEE---AKEL 407
I L + C ++ G+L + +V V + + + + G EE ++L
Sbjct: 675 PTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKL 734
Query: 408 FD--NMPKRNDVSWSAI-------ISGYLEHKQFDLVFAVFNEM 442
D + K SW I ++G + H DLV+A E+
Sbjct: 735 MDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEEL 778
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 115/312 (36%), Gaps = 77/312 (24%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
E +F+S I C +S V G+ +H +K+G +++ LL MY S+K
Sbjct: 505 EYTFSSVINAC------SSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMY--SKK-- 554
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
GN+E A+++F ER+ VSW ++I+G+ +HG
Sbjct: 555 ---------------------------GNIESAEKVFTRQEERDIVSWNSMITGYGQHGD 587
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
+ +AL++F + G+ ++VTF + A
Sbjct: 588 AK-------------------------------KALEVFQIMQNQGLPLDDVTFIGVLTA 616
Query: 194 CAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVV 251
C G F ++ K +K + ++ L + G D A + + M
Sbjct: 617 CTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPT 676
Query: 252 SWTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
W +L +E+G L A ++ P + V + ++ + +G EE + +
Sbjct: 677 IWRTLLAACRVHRNLELGKLA-AEKLVSLQP-NDAVGYVLLSNIHAVAGNWEEKAHVRKL 734
Query: 307 MTRYSFKPNTSC 318
M K C
Sbjct: 735 MDERKVKKEAGC 746
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 252/432 (58%), Gaps = 13/432 (3%)
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
S M+A Y SG + + +F + Y F VL + L ++ G VH +L+
Sbjct: 109 SKMVAFYASSGDIDSSVSVFNGIGDYF------TFPFVLKSSVELLSVWMGKCVHGLILR 162
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
IG++ D++++ +LI LY KCGE D VFD++ +DV+ SWN+++ GY +G ++ A
Sbjct: 163 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVS---SWNALLAGYTKSGCIDAA 219
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL--SGEIPNKSTFSSVLCASA 462
+F+ MP RN VSW+ +ISGY + ++F+EM+ SG PN T SVL A A
Sbjct: 220 LAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACA 279
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP--DKNEISW 520
+++LE+G+ +H ++G + + ALT YAK G + +R FD++ +KN I+W
Sbjct: 280 QLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAW 339
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
M+ A G+ ++++ F EM + I P+++T +L CSHSGLVD GLKYFN M
Sbjct: 340 NTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMST 399
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
Y+I P HY CV D+L R+GRL+EA + MP + W SLL+ C+ ++N ++AE
Sbjct: 400 TYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAE 459
Query: 641 RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQV 700
A + L+ L E+ YVLLSN+YA AGRW + +R ++ +G +KS GCSW+E+ +
Sbjct: 460 TAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKA 519
Query: 701 HFFFQKTDHNPK 712
H F +P+
Sbjct: 520 HMFLGGDTSHPQ 531
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 174/361 (48%), Gaps = 16/361 (4%)
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
TF + K+ E+ +G V GLI + G + + V SLI L K GE++ A VFD M
Sbjct: 136 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 195
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
RDV SW +L + + G + A IF+ MP RN VSW+ MI+ Y+QSG ++A LF
Sbjct: 196 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 255
Query: 306 QMTR--YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
+M + +PN VL A A L L G +H ++G+ + + AL +Y+K
Sbjct: 256 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 315
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSW 419
CG D R FD + ++ ++++WN+MI Y G +A F M + +D+++
Sbjct: 316 CGSLVDARNCFDKL-NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITF 374
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKII 478
+ ++SG D+ FN M + I P ++ V L + L G
Sbjct: 375 TGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVG--- 431
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIE----SSRRVFDRMPDKNEISWTVMVRGLAESGYAK 534
++ P + +L K ++E ++R++F P+ N ++ ++ AE+G +
Sbjct: 432 EMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPE-NTGNYVLLSNMYAEAGRWQ 490
Query: 535 E 535
E
Sbjct: 491 E 491
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 152/300 (50%), Gaps = 40/300 (13%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V G+ +HG +++ G+ + Y+ T L+I+Y C
Sbjct: 150 VWMGKCVHGLILRIGLQFDLYVATSLIILY-----------------------GKC---- 182
Query: 97 NIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
G + +A ++FD M R+ SW AL++G+ K G ++ ++ FER P++N++SWT I
Sbjct: 183 ----GEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMI 238
Query: 157 CGFVQNGFSFEALKLFLKLL--ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
G+ Q+G + +AL LF +++ +SGV+PN VT S+ ACA+++ G + L + G
Sbjct: 239 SGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMG 298
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK--RDVVSWTVILDVFIEMGDLGEARRI 272
+ SV +L + K G + AR+ FD++ + +++++W ++ + G +A
Sbjct: 299 LNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVST 358
Query: 273 FDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALA 327
F EM + ++++++ +++ + SG + + F M T YS P ++ V L
Sbjct: 359 FREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLG 418
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 192/628 (30%), Positives = 306/628 (48%), Gaps = 96/628 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ V +++ ++G L+ A ++F MP ++ SW A+IS
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS------------------- 195
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
GF QNG + AL + ++ GVK + +T +SI CA+ +D G+
Sbjct: 196 ------------GFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVL 243
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + K G + V V N+LI + K G + A+ VFD+ME RD+VSW I
Sbjct: 244 IHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSI--------- 294
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
IA Y Q+ P A R F+ M +P+ + S
Sbjct: 295 ----------------------IAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI 332
Query: 326 LASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ L R + V++ ++KDV I NAL+++Y+K G VFD + KD
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD--- 389
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+SWN+++ GY NG EA + ++ M + D
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDT--------------------------- 422
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
IPN+ T+ S++ A + V +L++G +H K+IK DVF+ T L D Y K G +E
Sbjct: 423 ---IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ +F +P + W ++ L G +E++ LF++M + + +T +S+L ACSH
Sbjct: 480 AMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLVD+G K F+ M+ Y IKP+ +HY C+VD+L R+G L +A + + +MP +PD++ W
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CK Y N ++ A L ++ E+ YVLLSNIYA+ +W + VR L ++G
Sbjct: 600 ALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRG 659
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
LRK+ G S V V ++ F+ +PK
Sbjct: 660 LRKTPGWSSVVVGSKAEVFYTGNQTHPK 687
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 153/576 (26%), Positives = 262/576 (45%), Gaps = 103/576 (17%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++V+ +IN + G++ ++ FD + ++N SW ++IS +++ G+ E+M
Sbjct: 53 NIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAM------- 105
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
N ++ ++CG ++P+ TF I KAC + D G
Sbjct: 106 --NCVNQLFSMCG------------------GGHLRPDFYTFPPILKACVSLVD---GKK 142
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V +FK GFE V V SL+ L + G +D+A VF M +DV SW
Sbjct: 143 VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSW------------ 190
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ MI+ + Q+G A + +M K +T + +L
Sbjct: 191 -------------------NAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPV 231
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A + +G+ +H HVLK G++ DVF+SNALI++YSK G +D ++VFD + +D +
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRD---L 288
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWNS+I Y N A F M L
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQ-------------------------------LG 317
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIES 504
G P+ T S+ + ++ + + G +I+ DV +G AL + YAK G +
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNC 377
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-PNELTILSVLFACS 563
+ VFD++P K+ ISW +V G ++G A E+I+ + ME+ T PN+ T +S++ A S
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437
Query: 564 HSGLVDKGLKYFNSMEPIYN-IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
H G + +G+K + I N + + TC++D+ + GRL +A +P + S
Sbjct: 438 HVGALQQGMKIHAKL--IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVP 494
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
W ++++ + + A + K++ LAE A ++
Sbjct: 495 WNAIIASLGIHGRGEEALQLFKDM--LAERVKADHI 528
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 198/472 (41%), Gaps = 78/472 (16%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ F+++ +C +N + + L+ G +++ + LI L + G++ L+RS FD
Sbjct: 22 DADFNALFNSCVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ K+++ SW I+ ++ G EA ++ L
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ---------------------------L 111
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +P+ F +L A SL G VH V K+G E DVF++ +L+ LYS+
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G VF + KDV SWN+MI G+ NG A
Sbjct: 169 YGVLDVAHKVFVDMPVKDVG---SWNAMISGFCQNGNAAGA------------------- 206
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
V N M G + T +S+L A + G +H ++K G
Sbjct: 207 ------------LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD 254
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
DVF+ AL + Y+K G ++ ++ VFD+M ++ +SW ++ ++ ++ F+ M
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM 314
Query: 544 EKTSITPNELTIL---SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ I P+ LT++ S+ S + L + E + G +V+M ++
Sbjct: 315 QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG---NALVNMYAK 371
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
G ++ A + +P D+ +W +L++G Y +A A+ + + + EE
Sbjct: 372 LGYMNCAHTVFDQLP-RKDTISWNTLVTG---YTQNGLASEAI-DAYNMMEE 418
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 38/201 (18%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
+++K+ D+ V C+I+ + G LE+A LF +P V W A+I+ HGR EE
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
AL+LF +L VK + +TF S+ AC+
Sbjct: 511 -------------------------------ALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 197 INDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWT 254
G F ++ K G + + ++ L + G ++ A + M + D W
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599
Query: 255 VILDVF-----IEMGDLGEAR 270
+L E+G L R
Sbjct: 600 ALLSACKIYGNAELGTLASDR 620
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 215/731 (29%), Positives = 349/731 (47%), Gaps = 101/731 (13%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+ R LH IK G +L+ L+ +Y+ A ++ +++ +LV C+I+
Sbjct: 117 EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYT 176
Query: 99 QWGNLEEAQRLFDGM------PER----------NEVSWTALISGFMKHGRVEESMW--- 139
Q G +EA F M P E + G HG + ++ +
Sbjct: 177 QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 236
Query: 140 -----------------------YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
F+ +N ISW + I + + G + A LF +
Sbjct: 237 VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ 296
Query: 177 ESGV----KPNEV--TFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLS 229
+ G+ KPN+ FS + + R G V + + G + V++ N L+ +
Sbjct: 297 KEGLGFSFKPNDAFSEFSVLEEG------RRKGREVHAHVIRTGLNDNKVAIGNGLVNMY 350
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW-SVMI 288
K G + A SVF+ M ++D VSW ++ + +A +F MPE ++VSW SV+
Sbjct: 351 AKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIG 410
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
A + +A + F QM R + + F +LSA++SL +HA VLK +
Sbjct: 411 ALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLS 470
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D I NAL+ Y KC G+M E +++F
Sbjct: 471 DDTAIGNALLSCYGKC----------------------------------GEMNECEKIF 496
Query: 409 DNMPK-RNDVSWSAIISGYLE----HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASAS 463
M + R++VSW+++ISGY+ HK DLV+ M+ G+ + TF+++L A AS
Sbjct: 497 ARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF----MMQKGQRLDSFTFATILSACAS 552
Query: 464 VASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVM 523
VA+LE+G ++H I+ DV +G+AL D Y+K G I+ + R F+ MP +N SW M
Sbjct: 553 VATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSM 612
Query: 524 VRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
+ G A G+ ++++ LF M P+ +T + VL ACSH G V++G ++F SM +Y
Sbjct: 613 ISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYR 672
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGC--KTYKNEQIAER 641
+ P H++C+VD+L R+G+L E DFINSMP +P+ W ++L C +N ++ R
Sbjct: 673 LSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRR 732
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A + L +L ++ YVLL+N+YAS +W D R M E ++K GCSWV +++ VH
Sbjct: 733 AAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVH 792
Query: 702 FFFQKTDHNPK 712
F +P+
Sbjct: 793 VFVAGDKLHPE 803
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 175/596 (29%), Positives = 286/596 (47%), Gaps = 86/596 (14%)
Query: 62 LLIMYLGSRKSLEANEI-VKDLN-GF--DLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
L+ Y GS S EA E+ ++ + GF +L + N +IN ++ G+L AQ+LFD M RN
Sbjct: 105 LINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRN 164
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
V+W LISG + QNG EA F ++
Sbjct: 165 LVTWACLISG-------------------------------YTQNGKPDEACARFRDMVR 193
Query: 178 SGVKPNEVTFSSICKACAE--INDFRLGLSVFGLIFKAGFEKHVSVCNSLITL-SLKMGE 234
+G PN F S +AC E + +LG+ + GLI K + V VCN LI++ +
Sbjct: 194 AGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDS 253
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ ARSVFD + R+ +SW I+ V+ GD A +F M
Sbjct: 254 ANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ----------------- 296
Query: 295 GYPEEAFRLFRQMTRYSFKPNT--SCFSIVLSALASLKALRSGMHVHAHVLKIGI-EKDV 351
++ +SFKPN S FS++ + R G VHAHV++ G+ + V
Sbjct: 297 ----------KEGLGFSFKPNDAFSEFSVL------EEGRRKGREVHAHVIRTGLNDNKV 340
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
I N L+++Y+K G D VF+ +VEKD VSWNS+I G N E+A E+F M
Sbjct: 341 AIGNGLVNMYAKSGAIADACSVFELMVEKD---SVSWNSLISGLDQNECSEDAAEMFSLM 397
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAV--FNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
P+ + VSW+++I G L + + AV F +M+ G ++ TF ++L A +S++ E
Sbjct: 398 PEYDQVSWNSVI-GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 456
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPD-KNEISWTVMVRGLA 528
+H ++K D +G AL Y K G++ ++F RM + ++E+SW M+ G
Sbjct: 457 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 516
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
+ ++++L M + + T ++L AC+ +++G++ ++ ++ +
Sbjct: 517 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME-VHACGIRACLESDV 575
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ +VDM S+ GR+ A F MP + +W S++SG Y E+A+K
Sbjct: 576 VVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISG---YARHGHGEKALK 627
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 27/289 (9%)
Query: 356 ALIDLYS-KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
+LI+ Y C + L SI V ++ N++I Y G + A++LFD M R
Sbjct: 104 SLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNR 163
Query: 415 NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLEKGKD 472
N V+W+ +ISGY ++ + D A F +M+ +G IPN F S L C + + + G
Sbjct: 164 NLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQ 223
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGD-IESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+HG I K + DV + L Y D +R VFD + +N ISW ++ + G
Sbjct: 224 IHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRG 283
Query: 532 YAKESINLFEEMEKT----SITPNE-LTILSVLFACS------HSGLVDKGLKYFNSMEP 580
A + +LF M+K S PN+ + SVL H+ ++ GL ++
Sbjct: 284 DAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLN--DNKVA 341
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
I N +V+M ++SG +++A M E DS +W SL+SG
Sbjct: 342 IGN---------GLVNMYAKSGAIADACSVFELM-VEKDSVSWNSLISG 380
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
TF S++ E+ ++LH + IK GF ++FL L + Y + GD+ S++++FD M
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
++N ++W ++ G ++G E+ F +M + PN S L AC SG
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 16/244 (6%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E + V +AL+ + K GR++ + +FE P +NV SW + I G+ ++G +ALKLF +
Sbjct: 572 ESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTR 631
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMG 233
++ G P+ VTF + AC+ + G F + + V + ++ L + G
Sbjct: 632 MMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAG 691
Query: 234 EVDLARSVFDRME-KRDVVSWTVILDVFIEMG----DLG-EARRIFDEMPERNEVSWSVM 287
++D + M K +V+ W +L +LG A + E+ +N V++ ++
Sbjct: 692 KLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLL 751
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
Y E+ + M + K C S ++ G+HV K+
Sbjct: 752 ANMYASGEKWEDVAKARTAMKEAAVKKEAGC---------SWVTMKDGVHVFVAGDKLHP 802
Query: 348 EKDV 351
EKD+
Sbjct: 803 EKDL 806
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/680 (29%), Positives = 338/680 (49%), Gaps = 113/680 (16%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
LH HL TG+H+ +T+L+ Y Q G
Sbjct: 367 LHAHLFITGLHRHPPASTKLIESY-------------------------------AQIGI 395
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES------MWYFERNPFQNVI--SWTA 154
E ++R+FD P+ + W LI ++ G EE+ M Y ++ N + S
Sbjct: 396 FESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLK 455
Query: 155 AICGFV------QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
A GF +NG + E L +F +++ V+P+ VT S+ +AC+E+ RLG
Sbjct: 456 ACSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLG----- 510
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS-----WTVILDVFIEM 263
++G V RSV + +R + +++++ +
Sbjct: 511 ----------------------RLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADT 548
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G+L + ++F+ + E+ +SW+ +I+ + ++G PEEA LF QM P++ + L
Sbjct: 549 GNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSL 608
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA ++ + G +H +++K G D F+ NALID+Y+KCG
Sbjct: 609 SACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGF----------------- 650
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+ A ++F+ + +++ V+W+++I G+ ++ +F++M
Sbjct: 651 -----------------VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMY 693
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
++ +K TF SV+ A + + LEKGK +H K+I G D +L TALTD Y+K G+++
Sbjct: 694 MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQ 753
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ VFDRM +++ +SW+VM+ G G +I+LF +M + I PN++T + +L ACS
Sbjct: 754 MAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACS 813
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+G V++G YFNSM + ++P H+ C+VD+LSR+G L+ A I S+PF +S+ W
Sbjct: 814 HAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIW 872
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+LL+GC+ +K I + KNL + Y LLSNIYA G W VR +M K
Sbjct: 873 GALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSK 932
Query: 684 GLRKSGGCSWVEVRNQVHFF 703
GLRK G S +E+ +++ F
Sbjct: 933 GLRKVPGYSTIEIDKKIYRF 952
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 164/419 (39%), Gaps = 101/419 (24%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +HG++IKTG F+ V N +I+ +
Sbjct: 620 GAQIHGYIIKTG--------------------------------NFNDFVQNALIDMYAK 647
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G + A ++F+ + E++ V+W ++I G F
Sbjct: 648 CGFVHSANKMFEKIKEKSLVTWNSMICG-------------------------------F 676
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
QNG+S EA+ LF ++ + VK +++TF S+ +AC+ + G V + G K
Sbjct: 677 SQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDS 736
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+ +L + K GE+ +A VFDRM +R +VSW
Sbjct: 737 YLDTALTDMYSKCGELQMAHGVFDRMSERSIVSW-------------------------- 770
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
SVMIA Y G LF QM KPN F +LSA + A+ G
Sbjct: 771 -----SVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYF 825
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
+ + G+E ++DL S+ G+ + S+ A+ W +++ G ++
Sbjct: 826 NSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFP--ANSSIWGALLNGCRIHK 883
Query: 400 QMEEAKELFDNMPKRN--DVSWSAIISG-YLEHKQFDLVFAVFNEMLLSG--EIPNKST 453
+++ K + N+ + D + ++S Y E +D V + M G ++P ST
Sbjct: 884 RIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYST 942
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
++S S CA+++ + LH + G T L ++YA+ G ESS+RVF
Sbjct: 349 SRSLTSHKRCATSTTLT-----QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVF 403
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEM---EKTSITPNELTILSVLFACSHSG 566
D P + W V+++ G+ +E+++L+ EM ++T I+ SVL ACS G
Sbjct: 404 DTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQIS--NFVFPSVLKACSGFG 461
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+ G K + E + DM S+ +SEA EPDS S+
Sbjct: 462 DLSVGGKNGQASEGL--------------DMFSQ--MISEA--------VEPDSVTMLSV 497
Query: 627 LSGC 630
C
Sbjct: 498 TEAC 501
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/732 (27%), Positives = 349/732 (47%), Gaps = 109/732 (14%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T L L+ TS L+ QG+ +H + G L+ L+ Y A E+V
Sbjct: 5 TLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASA-ELVFQT 63
Query: 83 NG--FDLVVHNCMINANIQWGNLEEAQRLFDGM-------PE------------------ 115
N D+ + N +++A EA +LFD + P+
Sbjct: 64 NDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123
Query: 116 ----------RNEVSW-----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
+ + W ++L++ + K + +++ F+ P ++V W A I +
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
++G + ALK F K+ E G +PN VTF+ + +C +
Sbjct: 184 KDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRL----------------------- 220
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
L+L+ G+ ++ R + +R D + ++D++ + G L A+ +F+++P +N
Sbjct: 221 -------LNLERGK-EVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKN 272
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
++W+ MI Y+ G L +M KP + ++ A + LR G +H
Sbjct: 273 AITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHG 332
Query: 341 HVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQ 400
++L+ I+ D+FI +LID Y KCG
Sbjct: 333 YILRNRIDVDIFIDVSLIDFYFKCG----------------------------------Y 358
Query: 401 MEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCA 460
+ A+ +F + K VSW+ +ISG++ +++ M P+ TFSS L A
Sbjct: 359 VSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSA 418
Query: 461 SASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISW 520
+ +A+L+KG++LH II + + AL D YAK GD++ +R++F ++P ++ +SW
Sbjct: 419 CSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSW 478
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
T M+ G A E++ LF+EM+K ++ + +T L+VL ACSH+GLVD+G YFN M
Sbjct: 479 TSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVV 538
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN-SMPFEPDSNAWASLLSGCKTYKNEQIA 639
Y+IKP HY+C++D+L R+GRL EA + + S D ++L S C + N +
Sbjct: 539 QYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLG 598
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQ 699
+ K L ++ + P+ Y+LLSN+YAS +W + VR+ M E GL+KS GCSW+E+ +
Sbjct: 599 IQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQR 658
Query: 700 VHFFFQKTDHNP 711
+H FF + NP
Sbjct: 659 IHPFFAEDKSNP 670
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 272/541 (50%), Gaps = 67/541 (12%)
Query: 173 LKLLESG-VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLK 231
L LL +G + P + SI ACA+ + ++ + ++ + NSLI + K
Sbjct: 48 LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCK 107
Query: 232 MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARY 291
G V +AR +FD+MP R+ VSW+ +IA Y
Sbjct: 108 CGAVS-------------------------------DARHVFDKMPSRDVVSWTYLIAGY 136
Query: 292 NQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
Q+ P EA L M R F+PN F+ +L A + G +HA +K ++DV
Sbjct: 137 AQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDV 196
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
++ +AL+D+Y++C + +VFD +V K+ VSWN++I G+ E
Sbjct: 197 YVGSALLDMYARCEQMDMAIMVFDRLVSKN---EVSWNALIAGFARKADGET-------- 245
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
F EM +G T+SS+ A A + +LE+G+
Sbjct: 246 -----------------------TLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 282
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+H +IK G F+G + YAKSG + +R+VFDRM ++ ++W M+ LA+ G
Sbjct: 283 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 342
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
KE++ FEE+ K I N++T LSVL ACSH GLV +G YF+ M+ YN++P HY
Sbjct: 343 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHY 401
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
VD+L R+G L EA F+ MP EP + W +LL C+ +KN ++ + A ++++L
Sbjct: 402 VSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDP 461
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ VLL NIYAS G+W DA VRK+M G++K CSWV++ N VH F D +P
Sbjct: 462 DDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHP 521
Query: 712 K 712
K
Sbjct: 522 K 522
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 38/329 (11%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERN 144
+++ +I A Q+ NL A+ + + + +LI + K G V ++ F++
Sbjct: 62 LYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKM 121
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++V+SWT I G+ QN EA+ L +L + +PN TF+S+ KA +G
Sbjct: 122 PSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGE 181
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ L K +++ V V ++L+ + + ++D+A VFDR+ ++ VSW ++ F
Sbjct: 182 QMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKA 241
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
D E F +M R F +S + S
Sbjct: 242 D-------------------------------GETTLMKFAEMQRNGFGATHFTYSSMFS 270
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A + AL G VHAH++K G + F+ N ++ +Y+K G D R VFD + ++D
Sbjct: 271 AFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRD--- 327
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
+V+WN+M+ G +EA F+ + K
Sbjct: 328 LVTWNTMLTALAQYGLGKEAVAHFEEIRK 356
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 7/264 (2%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+AL+ + + +++ ++ F+R +N +SW A I GF + L F ++ +G
Sbjct: 200 SALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFG 259
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
T+SS+ A A I G V + K+G + V N+++ + K G + AR V
Sbjct: 260 ATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKV 319
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYP 297
FDRM+KRD+V+W +L + G EA F+E+ + N++++ ++ + G
Sbjct: 320 FDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 379
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
+E F M Y+ +P + + L L+ + V K+ +E + AL
Sbjct: 380 KEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEAL---IFVFKMPMEPTAAVWGAL 436
Query: 358 IDLYSKCGETKDGRLVFDSIVEKD 381
+ K G+ D + E D
Sbjct: 437 LGACRMHKNAKMGQYAADHVFELD 460
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QGR +H HLIK+G ++ +L MY S ++A ++ ++ DLV N M+ A
Sbjct: 280 QGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALA 339
Query: 99 QWGNLEEAQRLFDGMP----ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTA 154
Q+G +EA F+ + + N++++ ++++ G V+E YF+ NV
Sbjct: 340 QYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEID 399
Query: 155 AICGFV----QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
FV + G EAL K+ ++P + ++ AC + ++G +
Sbjct: 400 HYVSFVDLLGRAGLLKEALIFVFKM---PMEPTAAVWGALLGACRMHKNAKMGQYAADHV 456
Query: 211 FK 212
F+
Sbjct: 457 FE 458
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 263/461 (57%), Gaps = 20/461 (4%)
Query: 267 GEARRIF---------DEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
GEAR I ++P E+ +I ++S P A L+ + R P
Sbjct: 15 GEARAIVRIQAALLTSGQLPRSVELH-DALIRALSRSARPHLALPLYAHLLRAGLLPTPH 73
Query: 318 CFSIVLSALASLKALRSG----MHVHAHVLKIGIEKDVFISNALIDLYSK-CGETKDGRL 372
+L ++A A+ + VH H +K+G+++ V +SNALI +++ G DG L
Sbjct: 74 TLPSLLKSMALSPAVPGAAVLALTVHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLL 133
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
+ + D + ++N++I Y G++ +A+ LFD MP RN VSWSA+++GY++
Sbjct: 134 LLRTAAAVDAS---TFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDG 190
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+F M P+ + VL A A +LE+GK +HG + G ++F GTAL
Sbjct: 191 REALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTAL 250
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D Y+K G+++ + VF+RM KN ++WT M++GLA G E++ LF +ME + I P++
Sbjct: 251 VDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDD 310
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+ + VL AC+H+GLVDKG + F+SM Y IKP HY C+VD+L+R+G L EA++ I
Sbjct: 311 IAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQ 370
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG-YVLLSNIYASAGRWI 671
MP EPD+ W +L++GC+ +KN + AE K+ W L E +G YVLLSNIYA++GR
Sbjct: 371 KMPMEPDALIWGALMAGCRFHKNVEFAEYVAKH-WILLEPDKSGAYVLLSNIYAASGRHA 429
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
A +R LM EKG+ K+ GCS VEV +H F +P+
Sbjct: 430 SAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPR 470
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 169/366 (46%), Gaps = 41/366 (11%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFR----LGLSVFGLIFKAGFEKHVSVCN 223
AL L+ LL +G+ P T S+ K+ A L L+V K G ++ V V N
Sbjct: 56 ALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHTHAVKLGLDRFVLVSN 115
Query: 224 SLITLSLK-MGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
+LI + +G + + D ++ ++ + G L +AR +FDEMP RN V
Sbjct: 116 ALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAV 175
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SWS M+ Y Q+G EA R+F +M +P+ + VL+A A AL G VH ++
Sbjct: 176 SWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYL 235
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
GI+ ++F AL+D+YSKCGE + VF+ + K+ V++W +MI G ++G+
Sbjct: 236 KAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKN---VLAWTTMIKGLAMHGRGS 292
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
EA LF M SG P+ F VLCA
Sbjct: 293 EAVMLFAQMES-------------------------------SGIRPDDIAFIGVLCACT 321
Query: 463 SVASLEKGKDLHGKII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISW 520
++KG++L ++ K G + + D A++G + ++ + +MP + + + W
Sbjct: 322 HAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIW 381
Query: 521 TVMVRG 526
++ G
Sbjct: 382 GALMAG 387
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 15/285 (5%)
Query: 84 GFD--LVVHNCMINANIQW-GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
G D ++V N +I + + G+L + L + ++ LI+ + + GR+ ++
Sbjct: 106 GLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLADARAL 165
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ P +N +SW+A + G+VQ G EAL++F ++ V+P++ + ACA+
Sbjct: 166 FDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGAL 225
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G V G + G + ++ +L+ + K GEV LA VF+RM+ ++V++WT ++
Sbjct: 226 EQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGL 285
Query: 261 IEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPN 315
G EA +F +M +++++ ++ +G ++ LF M R Y KP
Sbjct: 286 AMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPK 345
Query: 316 TSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALI 358
+ ++ LA R+G A + K+ +E D I AL+
Sbjct: 346 IEHYGCMVDLLA-----RNGFLYEAKEMIQKMPMEPDALIWGALM 385
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 202/619 (32%), Positives = 307/619 (49%), Gaps = 80/619 (12%)
Query: 96 ANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
A I+ G L + + F + E S T L S++ P + +
Sbjct: 38 ALIKSGELTGSAKSFHSLLEAAAASPTLLPYAV--------SLFRLGPRPPLSTPCYNVL 89
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF 215
+ F+ G +AL LF+++L + +S C A
Sbjct: 90 MRAFLHAGHPEDALHLFIEMLHA---------ASACPA---------------------- 118
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM----GDLGEARR 271
++H + C +L + S +M +D+ R V KR +V+ +L I M GD+ AR
Sbjct: 119 DQHTAAC-ALKSCS-RMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARL 176
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
+FD E V W+ ++A Y ++G E +F+ M + V++A +
Sbjct: 177 VFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGD 236
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
+ G V HV + G+ ++ + AL+D+Y+KCGE
Sbjct: 237 AKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGE------------------------- 271
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
IG +A+ LFD M R+ V+WSA+ISGY + Q +F+EM L+ PN
Sbjct: 272 IG---------KARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPND 322
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
T SVL A A + +LE GK +H + + LGTAL D YAK G I+ + F+
Sbjct: 323 VTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFES 382
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
MP KN +WT +++G+A +G +E++ LF M + I P ++T + VL ACSHS LV++G
Sbjct: 383 MPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEG 442
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
++F+SM Y IKP HY C+VD+L R+G + EA FI +MP EP++ W +LLS C
Sbjct: 443 RRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCA 502
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
++N I E A+K + L H YVLLSNIYASAG+W DA VRK M ++G+ K+ GC
Sbjct: 503 VHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGC 562
Query: 692 SWVEVRNQV-HFFFQKTDH 709
S +E+ V FF + +DH
Sbjct: 563 SLIELDGVVFEFFAEDSDH 581
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 208/523 (39%), Gaps = 86/523 (16%)
Query: 8 LFSINPETSFNSYIE-------------TCLCLLKDITSQNLVIQGRALHGHLIKTGIHK 54
L + +PE + + +IE T C LK + + GR + + +K G+
Sbjct: 94 LHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVA 153
Query: 55 ERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP 114
+R++ + L+ MY A + +V+ N ++ A ++ G+ E +F GM
Sbjct: 154 DRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGML 213
Query: 115 E---------------------------------------RNEVSWTALISGFMKHGRVE 135
E RN TAL+ + K G +
Sbjct: 214 EVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIG 273
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
++ F+ ++V++W+A I G+ Q EAL LF ++ + V+PN+VT S+ ACA
Sbjct: 274 KARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACA 333
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ G V + + + +L+ K G +D A F+ M ++ +WT
Sbjct: 334 VLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTA 393
Query: 256 ILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-Y 310
++ G EA +F M E +V++ ++ + S EE R F M R Y
Sbjct: 394 LIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDY 453
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALIDLYSKCGETK 368
KP + ++ L R+G+ A+ + + IE + I AL+ S C +
Sbjct: 454 GIKPRVEHYGCMVDLLG-----RAGLVDEAYQFIRTMPIEPNAVIWRALL---SSCAVHR 505
Query: 369 D---GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA----KELFD----NMPKRNDV 417
+ G I+ + +H + + Y GQ ++A KE+ D P + +
Sbjct: 506 NVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLI 565
Query: 418 SWSAIISGYL----EHKQFDLVFAVFNEML----LSGEIPNKS 452
++ + +H + ++ EM+ ++G +PN +
Sbjct: 566 ELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTA 608
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 208/700 (29%), Positives = 330/700 (47%), Gaps = 143/700 (20%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H + +G K+ ++ T+L+ MY +C
Sbjct: 14 GKQIHQQITVSGWGKDPFMLTKLIQMYA-----------------------DC------- 43
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
+L AQRLFD MP+ N +WTA+ +++HG ++
Sbjct: 44 -DHLFSAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKC---------------------- 80
Query: 160 VQN-GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
VQN GF + S V P+ F + +AC ++ F G+ + + G E +
Sbjct: 81 VQNYGF----------MKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESN 130
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKR------------------------------ 248
+ VCNSLI + +K G AR VF+ ME+R
Sbjct: 131 LQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRL 190
Query: 249 -----DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
DVV+W ++D + +MG EA + ++ + N +SW+ +I+ Y++ G + + R+
Sbjct: 191 DGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRV 250
Query: 304 FRQM-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN---ALID 359
F+ M R P+ C VL + + ALRSG +H + K+ VF S+ AL+
Sbjct: 251 FQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNT-VFYSSAGAALLT 309
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG +D VF+ + D + +V+WN+MI G+ ++A E F M +R D+
Sbjct: 310 MYAKCGRIQDAINVFELM---DKSDIVTWNAMILGFVELDLGKQAIECFREM-QRMDIK- 364
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+++T S++L V L+ G +H + K
Sbjct: 365 -----------------------------NDQTTISTIL----PVCDLQYGNPIHAYVRK 391
Query: 480 -LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ V + A+ Y K G + S+ +F MP+K+ +SW M+ G G+ + ++
Sbjct: 392 SITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALK 451
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
L +EM + I PN T SVL ACSHSGLVD+G + F SM Y+I P HY+C+VDML
Sbjct: 452 LLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDML 511
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
+R+G+ ++A FI+ MP EPD + W +LL+ C+ Y+N A + L ++ + YV
Sbjct: 512 ARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYV 571
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
LSNIYA AGRW DA VRK + KGL K G S +E R+
Sbjct: 572 TLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLIETRD 611
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 152/372 (40%), Gaps = 48/372 (12%)
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+L ++LK+L +G +H + G KD F+ LI +Y+ C + +FD
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFD------ 54
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
MP+ N +W+AI YL H +D +
Sbjct: 55 ----------------------------KMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGF 86
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M S +P+ F VL A + E G +H +I G ++ + +L D Y K G+
Sbjct: 87 MKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGN 146
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
S+R VF+ M +++ SW M+ G +G A ++ L M P+ +T +++ A
Sbjct: 147 ARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDA 206
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR----LSEAEDFINSMPFE 617
G D+ + +E +PN +T ++ S+ G L +D I
Sbjct: 207 YCQMGRFDEAWEVLKQIE-----QPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVS 261
Query: 618 PDSNAWASLLSGCKTY----KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDA 673
PD + S+L C+ ++I K AG LL+ +YA GR DA
Sbjct: 262 PDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLT-MYAKCGRIQDA 320
Query: 674 MNVRKLMTEKGL 685
+NV +LM + +
Sbjct: 321 INVFELMDKSDI 332
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 311/600 (51%), Gaps = 55/600 (9%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E N L++ + K G++ S +++++W + QN EAL+ +
Sbjct: 229 ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLRE 288
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
++ GV+P+ T SS+ AC+ + R G L +LK G
Sbjct: 289 MVLEGVEPDGFTISSVLPACSHLEMLRTG-------------------KELHAYALKNGS 329
Query: 235 VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+D + + ++D++ + R+FD M +R W+ MI Y Q+
Sbjct: 330 LD-----------ENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQN 378
Query: 295 GYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
Y EEA LF +M + N++ + V+ A A +H V+K G+++D F+
Sbjct: 379 EYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFV 438
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
NAL+D+YS+ G+ + +F + ++D +V+WN++I GY + + E+A + M
Sbjct: 439 QNALMDMYSRLGKIDIAKRIFGKMEDRD---LVTWNTIITGYVFSERHEDALLMLHKMQ- 494
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
LE K + V + PN T ++L + A++++L KGK++
Sbjct: 495 ------------ILERKASERASRVSLK-------PNSITLMTILPSCAALSALAKGKEI 535
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H IK DV +G+AL D YAK G ++ SR+VFD++P +N I+W V+V G +
Sbjct: 536 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNS 595
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
+++I++ M + PNE+T +SV ACSHSG+V++GLK F +M+ Y ++P+ HY C
Sbjct: 596 QDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYAC 655
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPD-SNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
VVD+L R+GR+ EA IN +P D + AW+SLL C+ + N +I E A +NL +L
Sbjct: 656 VVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPN 715
Query: 653 HPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+ YVLL+NIY+SAG W A VR+ M +G+RK GCSW+E ++VH F +P+
Sbjct: 716 VASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 775
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 144/637 (22%), Positives = 277/637 (43%), Gaps = 126/637 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLI-------MYLGSRKSLEANEIV 79
LL+ NL+ + + +I GI + + LL M LG K + A+ +
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLG--KQIHAH-VY 120
Query: 80 KDLNGFDLV-VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
K G D V V N ++N + G+ ++FD + ERN+VSW +LIS
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS------------ 168
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI- 197
++C F + + EA + +L+ V+P+ T S+ AC+
Sbjct: 169 ----------------SLCSFEKWEMALEAFRC---MLDEDVEPSSFTLVSVALACSNFP 209
Query: 198 --NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+G V + G E + + N+L+ + KMG++ ++ + E RD+
Sbjct: 210 MPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDL----- 263
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
V+W+ +++ Q+ EA R+M +P+
Sbjct: 264 --------------------------VTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPD 297
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVF 374
S VL A + L+ LR+G +HA+ LK G ++++ F+ +AL+D+Y C + G VF
Sbjct: 298 GFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVF 357
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
D + ++ + GL W+A+I+GY +++ +
Sbjct: 358 DGMFDRKI-------------GL---------------------WNAMITGYAQNEYDEE 383
Query: 435 VFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
+F EM S G + N +T + V+ A + K + +HG ++K G D F+ AL
Sbjct: 384 ALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALM 443
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME--------- 544
D Y++ G I+ ++R+F +M D++ ++W ++ G S ++++ + +M+
Sbjct: 444 DMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASER 503
Query: 545 --KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
+ S+ PN +T++++L +C+ + KG K ++ N+ + + +VDM ++ G
Sbjct: 504 ASRVSLKPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCG 562
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
L + + +P + W ++ + N Q A
Sbjct: 563 CLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQDA 598
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 218/492 (44%), Gaps = 90/492 (18%)
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W + V++ EA+ ++ ++ G+KP+ F ++ KA A++ D LG + ++
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 212 KAGFE-KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K G+ V+V N+L+ L K G+ VFDR+ +R
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER---------------------- 158
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS-- 328
N+VSW+ +I+ E A FR M +P S F++V ALA
Sbjct: 159 ---------NQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEP--SSFTLVSVALACSN 207
Query: 329 ---LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L G VHA+ L+ G E + FI N L+ +Y K G+ +++ S +D +
Sbjct: 208 FPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRD---L 263
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V+WN+++ N Q EA E YL EM+L
Sbjct: 264 VTWNTVLSSLCQNEQFLEALE-------------------YLR------------EMVLE 292
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIES 504
G P+ T SSVL A + + L GK+LH +K G + F+G+AL D Y + S
Sbjct: 293 GVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 352
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACS 563
RVFD M D+ W M+ G A++ Y +E++ LF EME+++ + N T+ V+ AC
Sbjct: 353 GCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACV 412
Query: 564 HSGLVDKGLKYFNSMEPIY------NIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
SG F+ E I+ + + ++DM SR G++ A+ M +
Sbjct: 413 RSGA-------FSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKME-D 464
Query: 618 PDSNAWASLLSG 629
D W ++++G
Sbjct: 465 RDLVTWNTIITG 476
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 182/367 (49%), Gaps = 37/367 (10%)
Query: 73 LEANEIVKDL-------NGFDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTA 123
LEA E ++++ +GF + V+ C ++ G A L +G + N +A
Sbjct: 280 LEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 339
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKP 182
L+ + +V F+ + + W A I G+ QN + EAL LF+++ ES G+
Sbjct: 340 LVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLA 399
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N T + + AC F ++ G + K G ++ V N+L+ + ++G++D+A+ +F
Sbjct: 400 NSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIF 459
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+ME RD+V+W I+ ++ ER+E ++ + +A
Sbjct: 460 GKMEDRDLVTWNTIITGYV--------------FSERHE---DALLMLHKMQILERKA-- 500
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+ +R S KPN+ +L + A+L AL G +HA+ +K + DV + +AL+D+Y+
Sbjct: 501 -SERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 559
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVS 418
KCG + R VFD I + +V++WN ++ YG++G ++A ++ M K N+V+
Sbjct: 560 KCGCLQMSRKVFDQI---PIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVT 616
Query: 419 WSAIISG 425
+ ++ +
Sbjct: 617 FISVFAA 623
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 161/389 (41%), Gaps = 47/389 (12%)
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
W ++ +S EA + M KP+ F +L A+A L+ + G +HAHV
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 344 KIGIEKD-VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
K G D V ++N L++LY KCG+ VFD I E++ VSWNS+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN---QVSWNSL----------- 166
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
IS +++++ F ML P+ T SV A +
Sbjct: 167 --------------------ISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACS 206
Query: 463 SVA---SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
+ L GK +H ++ G + F+ L Y K G + SS+ + ++ ++
Sbjct: 207 NFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVT 265
Query: 520 WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSME 579
W ++ L ++ E++ EM + P+ TI SVL ACSH ++ G +
Sbjct: 266 WNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYAL 325
Query: 580 PIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
++ N + +VDM ++ + M F+ W ++++G Y +
Sbjct: 326 KNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGM-FDRKIGLWNAMITG---YAQNEYD 381
Query: 640 ERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
E A+ L + E AG LL+N AG
Sbjct: 382 EEAL--LLFIEMEESAG--LLANSTTMAG 406
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 323/614 (52%), Gaps = 22/614 (3%)
Query: 110 FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
FD +P R+ V+W + ++ + V + +F P ++ +SW + + ++ + E L
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRS-LNSEHL 111
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG-LIFKAGFEKHVSVCNSLITL 228
+L + + + VT++++ A R GL V +F +++V+ N+++T
Sbjct: 112 AAARRLFDEMPQRDAVTWNTLLGAYV-----RRGLMVEAEKLFDEMPQRNVASWNTMVTG 166
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDE---MPERNEV--S 283
G+V+ A +FD M +D S ++ FI+ G L EA + + + + +E +
Sbjct: 167 FFSAGQVNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDA 226
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL-----RSGMHV 338
++ +IA Y Q G +A RLF + R ++ T+ + + S ++ R+G
Sbjct: 227 YNTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVC 286
Query: 339 HAH-VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
A + +KD+ N +I Y+K + ++ +F + + D+ VSWN +I G+
Sbjct: 287 SAREIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDI---VSWNLIIRGFTQ 343
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
G +E A+ FD MP+R +SW+ +ISGY ++ +D +F +ML +G P++ TFSSV
Sbjct: 344 KGDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSV 403
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L A AS+ L G LH ++I+ F D AL Y++ G + + +F +MP K+
Sbjct: 404 LAACASLPMLRLGAQLH-QLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDL 462
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
+SW ++ G G A E++ LFE+M + P +T +S+L AC ++GLV +G F++
Sbjct: 463 VSWNALIGGYEHHGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGLVSEGWMVFDT 522
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
M Y+I HY +V+++ R G+L +A + INSMP PD + W + L C KNE
Sbjct: 523 MIHEYSIAARIEHYAALVNLIGRHGQLDDALEVINSMPIAPDRSVWGAFLGACTAKKNEL 582
Query: 638 IAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVR 697
+A A K L K+ E A YVL+ N++A GRW A VR+ M ++G+ K G SW+++
Sbjct: 583 LAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKHPGYSWIDLH 642
Query: 698 NQVHFFFQKTDHNP 711
++VH F +P
Sbjct: 643 DKVHVFISGDTSHP 656
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 191/387 (49%), Gaps = 46/387 (11%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALIS 126
L S A + ++ D V N ++ A ++ G + EA++LFD MP+RN SW +++
Sbjct: 106 LNSEHLAAARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVT 165
Query: 127 GFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV- 185
GF G+V +++ F+ P ++ S + GF++NG EA +L K L V
Sbjct: 166 GFFSAGQVNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVD 225
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAG----------FEKHVSVCNSLITLSLKMGEV 235
++++ A ++ +F +I + F ++V NS++T ++ G+V
Sbjct: 226 AYNTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDV 285
Query: 236 DLARSVFDRMEKR-------------------------------DVVSWTVILDVFIEMG 264
AR +F+ M + D+VSW +I+ F + G
Sbjct: 286 CSAREIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKG 345
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
D+ AR FD MPER +SW+ MI+ Y Q+G+ + A LF +M P+ FS VL+
Sbjct: 346 DVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLA 405
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A ASL LR G +H +++ D SNAL+ +YS+ G D +F + +KD
Sbjct: 406 ACASLPMLRLGAQLH-QLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKD--- 461
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNM 411
+VSWN++IGGY +G EA +LF++M
Sbjct: 462 LVSWNALIGGYEHHGCATEALQLFEDM 488
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 165/367 (44%), Gaps = 70/367 (19%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
++ Y+ + A EI ++ DLV N MI + ++EEA++LF MP+ + VSW
Sbjct: 275 MMTCYIRTGDVCSAREIFNEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSW 334
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+I GF + G VE + +F+R P + ISW I G+ QNG A++LF K+LE+G
Sbjct: 335 NLIIRGFTQKGDVEHARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGT 394
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ TFSS+ ACA + RLG + LI K+ F + N+L+T+ + G + A ++
Sbjct: 395 PDRHTFSSVLAACASLPMLRLGAQLHQLIEKS-FLPDTATSNALMTMYSRGGALTDAEAI 453
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F +M ++D+VSW + +I Y G EA
Sbjct: 454 FKQMPQKDLVSW-------------------------------NALIGGYEHHGCATEAL 482
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+LF M P F +LSA +
Sbjct: 483 QLFEDMRSARVMPTHITFISLLSACGN--------------------------------- 509
Query: 362 SKCGETKDGRLVFDSIVEKD--VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS- 418
G +G +VFD+++ + A + + +++ G +GQ+++A E+ ++MP D S
Sbjct: 510 --AGLVSEGWMVFDTMIHEYSIAARIEHYAALVNLIGRHGQLDDALEVINSMPIAPDRSV 567
Query: 419 WSAIISG 425
W A +
Sbjct: 568 WGAFLGA 574
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 253/455 (55%), Gaps = 34/455 (7%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D++ +L + + DL A +F++M ER+ VSWSVMI + ++G E F+ FR++
Sbjct: 34 DLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELI 93
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
R KP+ V+ A L G +H+ VLK G+ D F+ + L+D+Y+KCG
Sbjct: 94 RAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMID 153
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
+ + +FD + +KD +V+ MI GY G+ E+ LFD M +
Sbjct: 154 NAKQLFDRMPKKD---LVTRTVMIAGYAECGKPNESWVLFDQMRR--------------- 195
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
G +P+K +++ A A + ++ K + +H + + DV L
Sbjct: 196 ----------------DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVEL 239
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
GTA+ D YAK G I+SSR +FDRM KN ISW+ M+ G +E++ LF M + I
Sbjct: 240 GTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGI 299
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
PN +T +S+L+ACSH+GLVD GL+ F+ M Y ++P+ +HYTC+VD+L R+GRL +A
Sbjct: 300 IPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQAL 359
Query: 609 DFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAG 668
I +M E D W + L C+ ++ +AE+A K L L ++P Y+LLSNIYA+AG
Sbjct: 360 RLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAG 419
Query: 669 RWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
RW D +R LM ++ L+K G +W+EV N ++ F
Sbjct: 420 RWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRF 454
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 198/437 (45%), Gaps = 72/437 (16%)
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
KH + + F + ++ +SW+ I GFV+NG + F +L+ +G KP+ +
Sbjct: 47 KHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPF 106
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ KAC + +G + + K G VC++L+ + K G +D
Sbjct: 107 VIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMID------------- 153
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
A+++FD MP+++ V+ +VMIA Y + G P E++ LF QM R
Sbjct: 154 ------------------NAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRR 195
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
F P+ +++A A L A+ VH +V DV + A+ID+Y+KCG
Sbjct: 196 DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDS 255
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
R +FD + +K+ V+SW++MIG YG +GQ EA EL
Sbjct: 256 SREIFDRMEQKN---VISWSAMIGAYGYHGQGREALEL---------------------- 290
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-IKLGFPYDVFL 488
F+ ML SG IPN+ TF S+L A + ++ G L + + G DV
Sbjct: 291 ---------FHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKH 341
Query: 489 GTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMV---RGLAESGYAKESINLFEEME 544
T + D ++G ++ + R+ + M +K+E W + R + A+++ L ++
Sbjct: 342 YTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQ 401
Query: 545 KTSITPNELTILSVLFA 561
+ P +LS ++A
Sbjct: 402 TQN--PGHYILLSNIYA 416
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 146/296 (49%), Gaps = 42/296 (14%)
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VHA V GI D+ ++N L+ + C + KD
Sbjct: 21 QVHAQVTTTGIIHDLIVANKLLYM---CAKHKD--------------------------- 50
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSS 456
+ A LF+ M +R+ VSWS +I G++++ ++ F F E++ +G P+ +
Sbjct: 51 ----LVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPF 106
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
V+ A L G+ +H ++K G D F+ + L D YAK G I++++++FDRMP K+
Sbjct: 107 VIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKD 166
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL---K 573
++ TVM+ G AE G ES LF++M + P+++ +++++ AC+ G ++K
Sbjct: 167 LVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHD 226
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
Y + +++ T ++DM ++ G + + + + M + + +W++++
Sbjct: 227 YVCARRYSLDVELG----TAMIDMYAKCGSIDSSREIFDRME-QKNVISWSAMIGA 277
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 157/376 (41%), Gaps = 50/376 (13%)
Query: 45 GHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLE 104
G +K G ++ + T R LI GS+ D V+ C + G L
Sbjct: 74 GGFVKNGDYERCFQTFRELIR-AGSKP---------DNFSLPFVIKACRDTMGLIMGRLI 123
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
+ L +G+ N V T L+ + K G ++ + F+R P +++++ T I G+ + G
Sbjct: 124 HSTVLKNGLHLDNFVCST-LVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGK 182
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
E+ LF ++ G P++V +I ACA++ V + + V + +
Sbjct: 183 PNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTA 242
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
+I + K G +D +R +FDRME+++V+SW
Sbjct: 243 MIDMYAKCGSIDSSREIFDRMEQKNVISW------------------------------- 271
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV-L 343
S MI Y G EA LF M PN F +L A + + G+ + + + +
Sbjct: 272 SAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSV 331
Query: 344 KIGIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM- 401
G+ DV ++DL + G RL+ + VEKD W + +G ++ Q+
Sbjct: 332 SYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEG---IWCAFLGACRIHRQVD 388
Query: 402 --EEAKELFDNMPKRN 415
E+A +L ++ +N
Sbjct: 389 LAEKAAKLLLSLQTQN 404
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 41/262 (15%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
+I GR +H ++K G+H + ++ + L+ MY A ++ + DLV MI
Sbjct: 117 LIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAG 176
Query: 97 NIQWGNLEEAQRLFDGM------PER----------------NEVSW------------- 121
+ G E+ LFD M P++ N+
Sbjct: 177 YAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD 236
Query: 122 ----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
TA+I + K G ++ S F+R +NVISW+A I + +G EAL+LF +L
Sbjct: 237 VELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN 296
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLI-FKAGFEKHVSVCNSLITLSLKMGEVD 236
SG+ PN +TF S+ AC+ GL +F L+ G V ++ L + G +D
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLD 356
Query: 237 LARSVFDRME-KRDVVSWTVIL 257
A + + ME ++D W L
Sbjct: 357 QALRLIENMEVEKDEGIWCAFL 378
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/680 (28%), Positives = 339/680 (49%), Gaps = 59/680 (8%)
Query: 45 GHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHN-------CMINAN 97
GHL G + + T LL L+++ V D DLV+H+ C+
Sbjct: 11 GHLASHGHLHDAFKTFSLL--------RLQSSSAVSD----DLVLHSAASLLSACVDVRA 58
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
G A + G+ E + V L++ + E+ E + + + W I
Sbjct: 59 FLAGVQVHAHCISSGV-EYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIA 117
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
+ +N E + + +++ G++P+ T+ S+ KAC E D G V G I + ++
Sbjct: 118 SYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKS 177
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM- 276
+ VCN+LI++ + + +AR +FDRM +RD VSW +++ + G EA +FD+M
Sbjct: 178 SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW 237
Query: 277 ---PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALR 333
E + ++W+++ Q+G A L +M + + I L A + + A+R
Sbjct: 238 FSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIR 297
Query: 334 SGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G +H + + + N LI +YSKC + + +VF E + +WNS+I
Sbjct: 298 LGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLC---TWNSIIS 354
Query: 394 GYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
GY + EEA L EML++G PN T
Sbjct: 355 GYAQLNKSEEASHL-------------------------------LREMLVAGFQPNSIT 383
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+S+L A +A+L+ GK+ H I++ F L +L D YAKSG I ++++V D M
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
++E+++T ++ G G ++ LF+EM ++ I P+ +T+++VL ACSHS LV +G
Sbjct: 444 SKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGE 503
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKT 632
+ F M+ Y I+P +H++C+VD+ R+G L++A+D I++MP++P WA+LL+ C
Sbjct: 504 RLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHI 563
Query: 633 YKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCS 692
+ N QI + A + L ++ E+P YVL++N+YA+AG W VR +M + G++K GC+
Sbjct: 564 HGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCA 623
Query: 693 WVEVRNQVHFFFQKTDHNPK 712
W++ + F +P+
Sbjct: 624 WIDTDSGFSLFSVGDTSSPE 643
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 192/488 (39%), Gaps = 95/488 (19%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +HG + + Y+ L+ MY R A + + D V N +IN
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G EA LFD M W SG VE S VI+W G
Sbjct: 223 EGMWSEAFELFDKM-------W---FSG------VEVS-----------VITWNIISGGC 255
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+Q G AL L ++ + V KAC+ I RLG + GL + ++
Sbjct: 256 LQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGID 315
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
+V N+LIT+ K ++ A VF + E+ + +W I
Sbjct: 316 NVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSI----------------------- 352
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
I+ Y Q EEA L R+M F+PN+ + +L A + L+ G H
Sbjct: 353 --------ISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 340 AHVLKIGIEKD-VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
++L+ KD + N+L+D+Y+K G+ + V D + ++D V++ S+I GYG
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRD---EVTYTSLIDGYGNQ 461
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVL 458
G+ A A+F EM SG P+ T +VL
Sbjct: 462 GEGGVA-------------------------------LALFKEMTRSGIKPDHVTVVAVL 490
Query: 459 CASASVASLEKGKDLHGKI-IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-N 516
A + + +G+ L K+ + G + + + D Y ++G + ++ + MP K +
Sbjct: 491 SACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPS 550
Query: 517 EISWTVMV 524
+W ++
Sbjct: 551 GATWATLL 558
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/651 (30%), Positives = 321/651 (49%), Gaps = 86/651 (13%)
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQR---------LFDGMPERNEVSWTALISGFM 129
+KDL G + + +++A ++ LEE +R + G+ + L++ +
Sbjct: 374 MKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYA 433
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
K G + ++ FE ++ +SW + I G QN S +A + F ++ +G P+ T S
Sbjct: 434 KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLIS 493
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+CA + LG + K G + VSV N+L+ L
Sbjct: 494 TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLAL--------------------- 532
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW-SVMIARYNQSGYPEEAFRLFRQMT 308
+ E G E ++F MPE ++VSW SV+ A + +A + F QM
Sbjct: 533 ----------YAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMM 582
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
R + + F +LSA++SL +HA VLK + D I NAL+ Y KC
Sbjct: 583 RGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC---- 638
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK-RNDVSWSAIISGYL 427
G+M E +++F M + R++VSW+++ISGY+
Sbjct: 639 ------------------------------GEMNECEKIFARMSETRDEVSWNSMISGYI 668
Query: 428 E----HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
HK DLV+ M+ G+ + TF+++L A ASVA+LE+G ++H I+
Sbjct: 669 HNELLHKAMDLVWF----MMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLE 724
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
DV +G+AL D Y+K G I+ + R F+ MP +N SW M+ G A G+ ++++ LF M
Sbjct: 725 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM 784
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
P+ +T + VL ACSH G V++G ++F SM +Y + P H++C+VD+L R+G+
Sbjct: 785 MLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGK 844
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGC--KTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
L E DFINSMP +P+ W ++L C +N ++ RA + L +L ++ YVLL+
Sbjct: 845 LDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLA 904
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+YAS +W D R M E ++K GCSWV +++ VH F +P+
Sbjct: 905 NMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPE 955
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 146/669 (21%), Positives = 283/669 (42%), Gaps = 126/669 (18%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+ R LH IK G +L+ L+ +Y+ A ++ +++ +LV C+I+
Sbjct: 89 EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYT 148
Query: 99 QWGNLEEAQRLFDGM------PER----------NEVSWTALISGFMKHGRVEESMW--- 139
Q G +EA F M P E + G HG + ++ +
Sbjct: 149 QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 208
Query: 140 -----------------------YFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
F+ +N ISW + I + + G + A LF +
Sbjct: 209 VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ 268
Query: 177 ESGV----KPNEVTFSS-ICKACAEINDFRLGL--SVFGLIFKAGFEKHVSVCNSLITLS 229
+ G+ KPNE TF S I AC+ + DF L + + + K+GF + + V ++L++
Sbjct: 269 KEGLGFSFKPNEYTFGSLITTACSSV-DFGLCVLEQMLARVEKSGFLQDLYVSSALVSGF 327
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
+ G D +A+ IF++M RN VS + ++
Sbjct: 328 ARFGLTD-------------------------------DAKNIFEQMGVRNVVSMNGLMV 356
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKAL----RSGMHVHAHVLKI 345
+ E A ++F +M N+ + ++LSA + L R G VHAHV++
Sbjct: 357 GLVKQKQGEAAAKVFHEMKDL-VGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRT 415
Query: 346 GI-EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
G+ + V I N L+++Y+K +G + +A
Sbjct: 416 GLNDNKVAIGNGLVNMYAK----------------------------------SGAIADA 441
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+F+ M +++ VSW+++ISG +++ + F+ M +G +P+ T S L + AS+
Sbjct: 442 CSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASL 501
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+ G+ +H +KLG DV + AL YA++G +VF MP+ +++SW ++
Sbjct: 502 GWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI 561
Query: 525 RGLAES-GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN 583
L++S +++ F +M + + +T +++L A S L + + +++ Y
Sbjct: 562 GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ-IHALVLKYC 620
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAV 643
+ + ++ + G ++E E M D +W S++SG Y + ++ +A+
Sbjct: 621 LSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG---YIHNELLHKAM 677
Query: 644 KNLWKLAEE 652
+W + ++
Sbjct: 678 DLVWFMMQK 686
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
TF S++ E+ ++LH + IK GF ++FL L + Y + GD+ S++++FD M
Sbjct: 73 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
++N ++W ++ G ++G E+ F +M + PN S L AC SG
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 16/244 (6%)
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
E + V +AL+ + K GR++ + +FE P +NV SW + I G+ ++G +ALKLF +
Sbjct: 724 ESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTR 783
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMG 233
++ G P+ VTF + AC+ + G F + + V + ++ L + G
Sbjct: 784 MMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAG 843
Query: 234 EVDLARSVFDRME-KRDVVSWTVILDVFIEMG----DLG-EARRIFDEMPERNEVSWSVM 287
++D + M K +V+ W +L +LG A + E+ +N V++ ++
Sbjct: 844 KLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLL 903
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
Y E+ + M + K C S ++ G+HV K+
Sbjct: 904 ANMYASGEKWEDVAKARTAMKEAAVKKEAGC---------SWVTMKDGVHVFVAGDKLHP 954
Query: 348 EKDV 351
EKD+
Sbjct: 955 EKDL 958
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/711 (28%), Positives = 341/711 (47%), Gaps = 103/711 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
+ LH L+ G + +++TRL+ +Y + + D+ N MI+A +
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 100 WGNLEEAQRLFDGMPERNEV--------------------------------SWTALISG 127
G+ EA F + +E+ W ++
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAA 254
Query: 128 FMKH-----GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+ H G + F+ PF+++ SW A I G +QNG + +AL + ++ G+K
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N VT SI C ++ D + + + K G E + V N+LI
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALI---------------- 358
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
+++ + G+L +AR+ F +M + VSW+ +IA Y Q+ P A
Sbjct: 359 ---------------NMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHG 403
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLY 361
F +M F+P+ + S +A + ++ VH +++ G + +DV I NA++D+Y
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+K G VF+ I+ KDV +SWN++I GY NG EA E++ M + ++
Sbjct: 464 AKLGLLDSAHKVFEIILVKDV---ISWNTLITGYAQNGLASEAIEVYKMMEECKEI---- 516
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
IPN+ T+ S+L A A V +L++G +HG++IK
Sbjct: 517 --------------------------IPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTN 550
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
DVF+ T L D Y K G + + +F ++P ++ ++W ++ G+A++++ LF
Sbjct: 551 LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFG 610
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
EM + P+ +T +S+L ACSHSG V++G F M+ Y IKP+ +HY C+VD+L R+
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRA 669
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L A FI MP +PD++ W +LL C+ + N ++ + A L+++ ++ YVLLS
Sbjct: 670 GYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLS 729
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
NIYA+ G+W VR L E+GL+K+ G S +EV +V F+ +PK
Sbjct: 730 NIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPK 780
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 218/529 (41%), Gaps = 105/529 (19%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
++ GR +H K G ++ L+ MY + A + D+ D+ N MI+
Sbjct: 231 LVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290
Query: 97 NIQWGNLEEAQRLFDGM-------------------PERNEVSWT--------------- 122
IQ GN +A + D M P+ ++S
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350
Query: 123 -----ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
ALI+ + K G +E++ F++ +V+SW + I + QN A F+K+
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEVD 236
+G +P+ +T S+ A+ D + SV G I + G+ + V + N+++ + K+G +D
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A VF+ + +DV+SW ++ + + G EA ++ M E E+
Sbjct: 471 SAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEII------------- 517
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
PN + +L A A + AL+ GM +H V+K + DVF++
Sbjct: 518 -----------------PNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATC 560
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LID+Y KCG D +F + ++ V+WN++I +G++G E+ +L
Sbjct: 561 LIDVYGKCGRLVDAMSLFYQVPQES---SVTWNAIISCHGIHGHAEKTLKL--------- 608
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
F EML G P+ TF S+L A + +E+GK
Sbjct: 609 ----------------------FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRL 646
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMV 524
+ + G + + D ++G +E + MP + + S W ++
Sbjct: 647 MQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALL 695
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 90/238 (37%), Gaps = 68/238 (28%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
QG +HG +IKT +H D+ V C+I+
Sbjct: 538 QGMRIHGRVIKTNLH-------------------------------LDVFVATCLIDVYG 566
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ G L +A LF +P+ + V+W A+IS HG E++
Sbjct: 567 KCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKT--------------------- 605
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
LKLF ++L+ GVKP+ VTF S+ AC+ G F L+ + G +
Sbjct: 606 ----------LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPS 655
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVF-----IEMGDLGEAR 270
+ ++ L + G +++A M + D W +L IE+G R
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDR 713
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/628 (30%), Positives = 306/628 (48%), Gaps = 96/628 (15%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ V +++ ++G L+ A ++F MP ++ SW A+IS
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS------------------- 195
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
GF QNG + AL + ++ GVK + +T +SI CA+ +D G+
Sbjct: 196 ------------GFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVL 243
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ + K G + V V N+LI + K G + A+ VFD+ME RD+VSW I
Sbjct: 244 IHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSI--------- 294
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
IA Y Q+ P A R F+ M +P+ + S
Sbjct: 295 ----------------------IAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI 332
Query: 326 LASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
+ L R + V++ ++KDV I NAL+++Y+K G VFD + KD
Sbjct: 333 FSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD--- 389
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+SWN+++ GY NG EA + ++ M + D
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDT--------------------------- 422
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
IPN+ T+ S++ A + V +L++G +H K+IK DVF+ T L D Y K G +E
Sbjct: 423 ---IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
+ +F +P + W ++ L G +E++ LF++M + + +T +S+L ACSH
Sbjct: 480 AMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
SGLVD+G K F+ M+ Y IKP+ +HY C+VD+L R+G L +A + + +MP +PD++ W
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKG 684
+LLS CK Y N ++ A L ++ E+ YVLLSNIYA+ +W + VR L ++G
Sbjct: 600 ALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRG 659
Query: 685 LRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
LRK+ G S V V ++ F+ +PK
Sbjct: 660 LRKTPGWSSVVVGSKAEVFYTGNQTHPK 687
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 153/576 (26%), Positives = 262/576 (45%), Gaps = 103/576 (17%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
++V+ +IN + G++ ++ FD + ++N SW ++IS +++ G+ E+M
Sbjct: 53 NIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAM------- 105
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
N ++ ++CG ++P+ TF I KAC + D G
Sbjct: 106 --NCVNQLFSMCG------------------GGHLRPDFYTFPPILKACVSLVD---GKK 142
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V +FK GFE V V SL+ L + G +D+A VF M +DV SW
Sbjct: 143 VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSW------------ 190
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ MI+ + Q+G A + +M K +T + +L
Sbjct: 191 -------------------NAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPV 231
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A + +G+ +H HVLK G++ DVF+SNALI++YSK G +D ++VFD + +D +
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRD---L 288
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSWNS+I Y N A F M L
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQ-------------------------------LG 317
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG-FPYDVFLGTALTDTYAKSGDIES 504
G P+ T S+ + ++ + + G +I+ DV +G AL + YAK G +
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNC 377
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT-PNELTILSVLFACS 563
+ VFD++P K+ ISW +V G ++G A E+I+ + ME+ T PN+ T +S++ A S
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437
Query: 564 HSGLVDKGLKYFNSMEPIYN-IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
H G + +G+K + I N + + TC++D+ + GRL +A +P + S
Sbjct: 438 HVGALQQGMKIHAKL--IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVP 494
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
W ++++ + + A + K++ LAE A ++
Sbjct: 495 WNAIIASLGIHGRGEEALQLFKDM--LAERVKADHI 528
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 198/472 (41%), Gaps = 78/472 (16%)
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ F+++ +C +N + + L+ G +++ + LI L + G++ L+RS FD
Sbjct: 22 DADFNALFNSCVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ K+++ SW I+ ++ G EA ++ L
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ---------------------------L 111
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F +P+ F +L A SL G VH V K+G E DVF++ +L+ LYS+
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G VF + KDV SWN+MI G+ NG A
Sbjct: 169 YGVLDVAHKVFVDMPVKDVG---SWNAMISGFCQNGNAAGA------------------- 206
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
V N M G + T +S+L A + G +H ++K G
Sbjct: 207 ------------LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD 254
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
DVF+ AL + Y+K G ++ ++ VFD+M ++ +SW ++ ++ ++ F+ M
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM 314
Query: 544 EKTSITPNELTIL---SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ I P+ LT++ S+ S + L + E + G +V+M ++
Sbjct: 315 QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG---NALVNMYAK 371
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEE 652
G ++ A + +P D+ +W +L++G Y +A A+ + + + EE
Sbjct: 372 LGYMNCAHTVFDQLP-RKDTISWNTLVTG---YTQNGLASEAI-DAYNMMEE 418
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 38/201 (18%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
+++K+ D+ V C+I+ + G LE+A LF +P V W A+I+ HGR EE
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
AL+LF +L VK + +TF S+ AC+
Sbjct: 511 -------------------------------ALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 197 INDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWT 254
G F ++ K G + + ++ L + G ++ A + M + D W
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599
Query: 255 VILDVF-----IEMGDLGEAR 270
+L E+G L R
Sbjct: 600 ALLSACKIYGNAELGTLASDR 620
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 264/461 (57%), Gaps = 13/461 (2%)
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
DL AR+IF M N S++ +I ++S P +A +F +M S +PN F V
Sbjct: 60 DLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVF 119
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF--------- 374
A + LR G VH +K G++ D F+ + ++ +Y CG +D +F
Sbjct: 120 KACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGC 179
Query: 375 DSIVEKDV---AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
D I +K VV WN MI GY G++E A+ LFD MP+R+ VSW+ +I+GY +
Sbjct: 180 DGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGH 239
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
F VF EM ++ PN T SVL A + + +LE GK +H ++ D LG+A
Sbjct: 240 FKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSA 299
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L D YAK G IE + +VF+ +P +N ++W+ ++ GLA G AK++++ FE+ME+ + P+
Sbjct: 300 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
++T + +L ACSH+GLV++G +F+ M + ++P HY C+VD+L R+G L E+E+ I
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWI 671
+MP +PD W +LL CK + N ++ +R ++L +LA YV LSNIYAS G W
Sbjct: 420 LNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWE 479
Query: 672 DAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VR +M E +RK GCSW+E+ +H F + D +PK
Sbjct: 480 GVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPK 520
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 165/298 (55%), Gaps = 23/298 (7%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEINDFRLGLSV 206
N S+ I ++ +AL +F++++E V+PN TF S+ KAC R G V
Sbjct: 75 NCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQV 134
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM-----------EKR----DVV 251
GL K G + V ++++ + L G ++ A +F R +KR DVV
Sbjct: 135 HGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVV 194
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
W V++D ++ +G+L AR +FDEMP+R+ VSW+VMIA Y QSG+ +EA +FR+M
Sbjct: 195 LWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAE 254
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
PN VL A++ L AL G VH + ++ I D + +ALID+Y+KCG +
Sbjct: 255 VPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKAL 314
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
VF+ + +++ VV+W+++I G ++G+ ++ + F++M + +DV++ ++S
Sbjct: 315 QVFEGLPKRN---VVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSA 369
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 161/374 (43%), Gaps = 50/374 (13%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+GR +HG +K G+ + ++ + ++ MYL S E L + V C
Sbjct: 130 EGRQVHGLAVKFGLDSDEFVVSNVVRMYL----SCGVMEDAHRLFYRRVFVDGC------ 179
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ + +R DG + V W +I G+++ G +E + F+ P ++V+SW I G
Sbjct: 180 --DGIRDKKRRVDG----DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAG 233
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
+ Q+G EA+++F ++ + V PN VT S+ A + + LG V +
Sbjct: 234 YAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVD 293
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+ ++LI + K G ++ A VF+ + KR+VV+W+ I
Sbjct: 294 DVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTI---------------------- 331
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
IA G ++ F M R P+ + +LSA + + G
Sbjct: 332 ---------IAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWF 382
Query: 339 HAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
H++++ G+E + ++DL + G ++ + ++ K V W +++G +
Sbjct: 383 FDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIK--PDDVIWKALLGACKM 440
Query: 398 NGQMEEAKELFDNM 411
+G +E K + +++
Sbjct: 441 HGNVEMGKRVAEHL 454
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 53/269 (19%)
Query: 29 KDITSQNLVIQGRALHGHL---------IKTGIHKERYLT--------TRLLIMYLGSRK 71
+ + S N++I G A GH ++ Y+T +RL + LG
Sbjct: 222 RSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWV 281
Query: 72 SLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
L A V++ G D V+ + +I+ + G++E+A ++F+G+P+RN V+W+ +I+G H
Sbjct: 282 HLYA---VRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMH 338
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
GR ++++ +FE + +GV P++VT+ +
Sbjct: 339 GRAKDTLDHFE-------------------------------DMERAGVMPSDVTYIGLL 367
Query: 192 KACAEINDFRLGLSVFGLIFK-AGFEKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRD 249
AC+ G F + + +G E + ++ L + G ++ + + M K D
Sbjct: 368 SACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPD 427
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPE 278
V W +L G++ +R+ + + E
Sbjct: 428 DVIWKALLGACKMHGNVEMGKRVAEHLME 456
>gi|218197545|gb|EEC79972.1| hypothetical protein OsI_21597 [Oryza sativa Indica Group]
Length = 731
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/619 (29%), Positives = 316/619 (51%), Gaps = 13/619 (2%)
Query: 77 EIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEE 136
+++ + ++ + N +I+ + + +A++ FD MP RN VSWTA+I G V+
Sbjct: 125 QVLDGVESPNVALWNALISGLVMNHRVGDARKAFDRMPVRNVVSWTAMIKGHFTVHEVDM 184
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
+ F+ P +N +SW I GFV + EA++LF L+ +G + V I A A
Sbjct: 185 AFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVNAFAG 244
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
+ R G + GL K+GF + + SL+ + K ++ AR FD+ME V SW +
Sbjct: 245 MKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAM 304
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
L +I + EAR++FD M R+++SW+ MI Y G +A L+ +MT S + T
Sbjct: 305 LCGYIYSDKIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAAT 364
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDGRLVFD 375
+ S + +GM A + + + DV L+ Y K G D +F
Sbjct: 365 ALMSWFID---------NGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFH 415
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ ++ V V++N MI G G++ EA +LF+ P R+ V+WS +++G +
Sbjct: 416 MMQKRTV---VTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEA 472
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+ +MLLS P++S SS++ ++ + + G+ H IK+G + + +L
Sbjct: 473 LQFYKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISL 532
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G++ ++ +FD M +++++W ++ G A + + ++ +FE M K + P+++T
Sbjct: 533 YCKCGEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITF 592
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
L VL AC+H L+++ +FN+M Y I PN HY C+VD+ R + EAE + SMP
Sbjct: 593 LGVLSACNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRKCMIKEAEGLVKSMP 652
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
FEPDS W SLLSGC+ N+++AE A L + Y+ L +++ + +
Sbjct: 653 FEPDSAIWTSLLSGCRLTGNDKLAEHAASQLIAIDPCTKMPYLHLISVHGLTNKSTVIDS 712
Query: 676 VRKLMTEKGLRKSGGCSWV 694
+R + K G SW+
Sbjct: 713 LRSQIKSTATEKDVGYSWI 731
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 247/493 (50%), Gaps = 29/493 (5%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L++ ++ GR+E + F+ P ++V+SW + + G A+ FL++ G +P+
Sbjct: 41 LMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFRPD 100
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+FS+ ACA + +G S + +V++ N+LI+ + V AR FD
Sbjct: 101 HTSFSTALSACARLEALEMG-SCLEQVLDGVESPNVALWNALISGLVMNHRVGDARKAFD 159
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
RM R+VVSWT ++ + ++ A ++F MP +N VSW VMI + EA L
Sbjct: 160 RMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVEL 219
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
F + + +++A A +K++R G +H +K G D+ + +L+ +Y K
Sbjct: 220 FNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYCK 279
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
+ + RL FD + + HV SWN+M+ GY + +++EA++LFD+M R+ +SW+++I
Sbjct: 280 SLDITEARLEFDKM---EGNHVGSWNAMLCGYIYSDKIDEARKLFDSMNNRDKISWNSMI 336
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA------SLEKGKDLHGKI 477
+GY+ + + + E+ +K T S+ A+A ++ L+K +D+ +
Sbjct: 337 NGYINDGR----------IADATELYSKMTEKSLEAATALMSWFIDNGMLDKARDMFYNM 386
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
++ DV T L Y K G ++ + +F M + +++ VM+ GL G E+
Sbjct: 387 PQI----DVMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGLFHQGKITEAY 442
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
LF E S T + +T ++ + +GL+ + L+++ M + NI+P+ + ++
Sbjct: 443 KLFNE----SPTRDSVTWSCLVAGLATNGLIHEALQFYKKM-LLSNIRPSESVVSSLISC 497
Query: 598 LSRSGRLSEAEDF 610
LS + + F
Sbjct: 498 LSNYSMMVHGQQF 510
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 238/533 (44%), Gaps = 79/533 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +HG +K+G + L L++MY S EA + G + N M+ I
Sbjct: 251 GRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIY 310
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
++EA++LFD M R+++SW ++I+G++ GR+ ++ + + +++ + TA + F
Sbjct: 311 SDKIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWF 370
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+ NG +A +F + + V
Sbjct: 371 IDNGMLDKARDMFYNMPQIDVMS------------------------------------- 393
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
C +L+ +K G +D A +F M+KR VV++ V++ G + EA ++F+E P R
Sbjct: 394 --CTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGLFHQGKITEAYKLFNESPTR 451
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+ V+WS ++A +G EA + +++M + +P+ S S ++S L++ + G H
Sbjct: 452 DSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQFH 511
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
A +KIG++ + I N+LI LY KCGE + +FD + ++D V+WN++I GY LN
Sbjct: 512 ATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKRD---KVTWNTIIHGYALNN 568
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLC 459
+ A E+F++M K Q D P+ TF VL
Sbjct: 569 LGQNAVEMFESMTK----------------AQVD---------------PDDITFLGVLS 597
Query: 460 ASASVASLEKGKD-LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNE 517
A ++ LE+ K + G ++ + D + + I+ + + MP + +
Sbjct: 598 ACNHMSLLEEAKYFFNAMTCTYGILPNIMHYACMVDLFCRKCMIKEAEGLVKSMPFEPDS 657
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
WT ++ G +G K L E I + T + L S GL +K
Sbjct: 658 AIWTSLLSGCRLTGNDK----LAEHAASQLIAIDPCTKMPYLHLISVHGLTNK 706
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 196/431 (45%), Gaps = 70/431 (16%)
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+ G L AR +FD MP R+ VSW+ ++A ++G A F +M R F+P+ + FS
Sbjct: 46 LRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFRPDHTSFS 105
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIVE 379
LSA A L+AL G + VL G+E +V + NALI D R FD +
Sbjct: 106 TALSACARLEALEMGSCLE-QVLD-GVESPNVALWNALISGLVMNHRVGDARKAFDRM-- 161
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
V +VVSW +MI G+ +++ A +LF MP +N VSW +I G++ H++F +F
Sbjct: 162 -PVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVELF 220
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
N ++++GE ++ A A + S+ G+ +HG +K GF YD+ L +L Y KS
Sbjct: 221 NSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYCKS 280
Query: 500 GD-------------------------------IESSRRVFDRMPDKNEISWTVMVRGLA 528
D I+ +R++FD M ++++ISW M+ G
Sbjct: 281 LDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMNNRDKISWNSMINGYI 340
Query: 529 ESGYAKESINLFEEMEKTSITP---------------------------NELTILSVLFA 561
G ++ L+ +M + S+ + ++ ++LF
Sbjct: 341 NDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFG 400
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
G +D L F+ M+ K Y ++ L G+++EA N P DS
Sbjct: 401 YVKGGHMDDALDLFHMMQ-----KRTVVTYNVMISGLFHQGKITEAYKLFNESPTR-DSV 454
Query: 622 AWASLLSGCKT 632
W+ L++G T
Sbjct: 455 TWSCLVAGLAT 465
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L + ++G +E++R VFD MP ++ +SW ++ A +G ++ F EM + P+
Sbjct: 41 LMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFRPD 100
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
+ + L AC+ ++ G ++ + + PN + ++ L + R+ +A
Sbjct: 101 HTSFSTALSACARLEALEMGSCLEQVLDGVES--PNVALWNALISGLVMNHRVGDARKAF 158
Query: 612 NSMPFEPDSNAWASLLSG 629
+ MP + +W +++ G
Sbjct: 159 DRMPVR-NVVSWTAMIKG 175
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 268/459 (58%), Gaps = 6/459 (1%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++D + + G L +A ++FD +P+++ V+W+ +++ N S P +AF + + +P+
Sbjct: 49 LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPD 108
Query: 316 TSCFSIVLSALASLKAL--RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
FS ++ A A+L ++ + G +HA L +D + ++L+D+Y+K GR V
Sbjct: 109 HFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAV 168
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FDSI E +SW +MI GY +G+ EA ELF P +N +W+A+ISG ++ +
Sbjct: 169 FDSIFELSS---ISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNAN 225
Query: 434 LVFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+F EM G I + SSV+ A A+ A E GK +H +I LG+ +F+ AL
Sbjct: 226 DALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNAL 285
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK D+ +++ +F M K+ +SWT ++ G A+ G A+E++ L+++M + PNE
Sbjct: 286 VDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNE 345
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
+T + +++ACSH GLV KG F SM + I+P+ +HYTC++D+ SRSG L EAE+ I
Sbjct: 346 VTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIR 405
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
+MP +PD WA+LLS CK + N ++A R +L L E P+ Y+LLSNIYA AG W +
Sbjct: 406 TMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWEN 465
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
VRKLM K ++K G S V++ + F P
Sbjct: 466 VSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQP 504
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 216/463 (46%), Gaps = 41/463 (8%)
Query: 105 EAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGF 164
AQ + G+ + T LI + K G +++++ F+ P Q+ ++W + +
Sbjct: 31 HAQIIKSGLNHHHPFPKT-LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNL 89
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF--RLGLSVFGLIFKAGFEKHVSVC 222
+A + L +L G++P+ FSS+ KACA + +LG + + F + V
Sbjct: 90 PHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVK 149
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
+SL+ + K D R+VFD + + +SWT ++ + G EA +F E P +N
Sbjct: 150 SSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLY 209
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFK-PNTSCFSIVLSALASLKALRSGMHVHAH 341
+W+ +I+ QSG +A LF +M R + S V+ A A+ G VH
Sbjct: 210 AWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCV 269
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
V+ +G E +FISNAL+D+Y+KC + + +F + KD VVSW S+I G +G
Sbjct: 270 VITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKD---VVSWTSIIVGTAQHGLA 326
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EEA L+D +M+L+G PN+ TF ++ A
Sbjct: 327 EEALTLYD-------------------------------DMVLAGVKPNEVTFVGLIYAC 355
Query: 462 ASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEIS 519
+ V + KG+ L +++ G + T L D +++SG ++ + + MP K +E +
Sbjct: 356 SHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPT 415
Query: 520 WTVMVRGLAESGYAKESINLFEE-MEKTSITPNELTILSVLFA 561
W ++ G K ++ + + ++ P+ +LS ++A
Sbjct: 416 WAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYA 458
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 173/383 (45%), Gaps = 69/383 (18%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D VV + +++ ++ + + +FD + E + +SWTA+ISG+ + GR E++ F +P
Sbjct: 145 DDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESP 204
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK-PNEVTFSSICKACAEINDFRLGL 204
F+N+ +WTA I G VQ+G + +AL LF+++ GV + + SS+ ACA LG
Sbjct: 205 FKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGK 264
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V ++ G+E + + N+L+ + K +V A+ +F M ++DVVSWT I+
Sbjct: 265 QVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSII------- 317
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
+G A Q G EEA L+ M KPN F ++
Sbjct: 318 -VGTA-----------------------QHGLAEEALTLYDDMVLAGVKPNEVTFVGLIY 353
Query: 325 ALASLKALRSGMHVHAHVLK-IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A + + + G + +++ GI + L+DL+S+
Sbjct: 354 ACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSR-------------------- 393
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+G ++EA+ L MP K ++ +W+A++S H + + + +
Sbjct: 394 --------------SGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHL 439
Query: 443 L-LSGEIPNKSTFSSVLCASASV 464
L L E P+ S + A A +
Sbjct: 440 LDLKPEDPSSYILLSNIYAGAGM 462
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 44/211 (20%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+HA ++K G+ LID Y KCG KD +FD+
Sbjct: 30 LHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDA--------------------- 68
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGY----LEHKQFDLVFAVFNEMLLSGEIPNKST 453
+P+++ V+W+ ++S L HK F + + +E G P+
Sbjct: 69 -------------LPQQDHVAWATVLSACNLSNLPHKAFSISLPILHE----GLQPDHFV 111
Query: 454 FSSVLCASASVAS--LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
FSS++ A A++ S ++ GK LH + + F D + ++L D YAK + R VFD
Sbjct: 112 FSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDS 171
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+ + + ISWT M+ G A SG E++ LF E
Sbjct: 172 IFELSSISWTAMISGYARSGRKLEALELFRE 202
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 43/197 (21%)
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAE 529
K LH +IIK G + L D Y K G ++ + ++FD +P ++ ++W ++
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG----------------------- 566
S ++ ++ + + P+ S++ AC++ G
Sbjct: 87 SNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDD 146
Query: 567 --------------LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
L D G F+S+ + +I +T ++ +RSGR EA +
Sbjct: 147 VVKSSLVDMYAKFELPDYGRAVFDSIFELSSIS-----WTAMISGYARSGRKLEALELFR 201
Query: 613 SMPFEPDSNAWASLLSG 629
PF+ + AW +L+SG
Sbjct: 202 ESPFK-NLYAWTALISG 217
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +H +I G +++ L+ MY + A I ++ D+V +I Q
Sbjct: 263 GKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQ 322
Query: 100 WGNLEEAQRLFDGM----PERNEVSWTALISGFMKHGRVEESMWYFE--------RNPFQ 147
G EEA L+D M + NEV++ LI G V + F+ R Q
Sbjct: 323 HGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQ 382
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ +T + F ++G EA L + VKP+E T++++ AC + ++ + +
Sbjct: 383 H---YTCLLDLFSRSGHLDEAENLIRTM---PVKPDEPTWAALLSACKHHGNTKMAVRI 435
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 334/650 (51%), Gaps = 58/650 (8%)
Query: 67 LGSRKSLEANEIVKDLNGFDLVVHNCMINANI--QWGNLEEAQRLFDGMPERNEVSWTAL 124
G+ K +N +L L ++NC I + + GN+ A++LFD MP + VS+TA+
Sbjct: 47 FGATKISSSNSGKSNLRSTVLDIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAM 106
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
I+ ++K+ + ++ F+ P + +++ +A I G+ + G A K+F ++++ V
Sbjct: 107 ITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNV---- 162
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
FS SLI+ + G+V A +FD+
Sbjct: 163 --FS---------------------------------WTSLISGYFRDGQVAKACQLFDQ 187
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M ++VVSWT ++ + G + +AR +F++MPE+N +SW+ M+ Y +G +EA +LF
Sbjct: 188 MPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLF 247
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV-HAHVLKIGIEKDVFISNALIDLYSK 363
+M + N ++ ++S K + + H L+ + + +S ++
Sbjct: 248 HEMP----QRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSG-----LAR 298
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
G TK R FD + KD+A +WN+MI Y + EA ELF+ M +RN V+W+A+I
Sbjct: 299 NGFTKLAREYFDQMPNKDIA---AWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMI 355
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
GY H+ ML S PN++T + +L + + L + H I +G
Sbjct: 356 DGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLELMQA---HALAIVVGCE 412
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+ L AL Y++ GDI SSR F+ + K+ +SWT M+ G+ ++++F M
Sbjct: 413 CETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHM 472
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
K+ P+E+T + VL ACSH+GLV KG K F+SM Y ++P HY+C+VD+L R+G+
Sbjct: 473 LKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQ 532
Query: 604 LSEAEDFINSMP-FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
+ EA D + MP E D +LL C+ + N ++A+ + L +L GYVLL+N
Sbjct: 533 VHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLAN 592
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++A+ G W + VRK M ++ +RK G S +EV+ + H FF +P+
Sbjct: 593 VFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIEVKGKCHAFFAGDKSHPQ 642
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 222/490 (45%), Gaps = 69/490 (14%)
Query: 53 HKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG 112
H + T ++ YL + + +A ++ + + +V + MI+ + G ++ AQ++FD
Sbjct: 97 HHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVFDA 156
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
M + N SWT+LISG+ + G+V ++ F++ P +NV+SWT + G+ +NG +A +F
Sbjct: 157 MIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVF 216
Query: 173 ---------------------------LKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
LKL + N +++++ C +
Sbjct: 217 NQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFK 276
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+F L+ VS +++ + G LAR FD+M +D+ +W ++ +++
Sbjct: 277 LFHLM---PLRNAVS-WTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECL 332
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ EA +F+ M ERN V+W+ MI Y + EA + M R +PN + +I+L++
Sbjct: 333 IVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTS 392
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L M HA + +G E + +SNALI +YS+ G+ R+ F+S+ KD V
Sbjct: 393 CWGMLEL---MQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKD---V 446
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VSW +M+ + +G + A VF ML S
Sbjct: 447 VSWTAMLLAFTYHGHGDHA-------------------------------LHVFGHMLKS 475
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIES 504
G P++ TF VL A + ++KG+ L + + G + L D ++G +
Sbjct: 476 GTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHE 535
Query: 505 SRRVFDRMPD 514
+ V +MP+
Sbjct: 536 AMDVVWKMPE 545
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 189/434 (43%), Gaps = 55/434 (12%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T ++ Y+ + ++ EA ++ ++ +L N MI+ + + EA +LF MP RN V
Sbjct: 228 TAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAV 287
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQ-------------------------------N 148
SWT ++SG ++G + + YF++ P + N
Sbjct: 288 SWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERN 347
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+++W A I G+ ++ EA+K + +L S ++PNE T + I +C + + +
Sbjct: 348 IVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCWGMLEL---MQAHA 404
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
L G E S+ N+LIT+ ++G++ +R F+ ++ +DVVSWT +L F G
Sbjct: 405 LAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDH 464
Query: 269 ARRIFDEM----PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVL 323
A +F M + +E+++ +++ + +G ++ +LF M+R Y +P +S ++
Sbjct: 465 ALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLV 524
Query: 324 SALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L + M V V K+ E+D + AL+ G + + ++E
Sbjct: 525 DILGRAGQVHEAMDV---VWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQP 581
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN------------DVSWSAIISGYLEHK 430
+ + + G +E E+ M RN A +G H
Sbjct: 582 NSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIEVKGKCHAFFAGDKSHP 641
Query: 431 QFDLVFAVFNEMLL 444
Q + ++ + E LL
Sbjct: 642 QVEEIYELLREKLL 655
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 260/467 (55%), Gaps = 12/467 (2%)
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
T ++DV D+ A +F E+ + N ++ MI + ++QM R
Sbjct: 24 TKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRN 83
Query: 314 PNTS---------CFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
TS F V+ A A L G VHA K G + + NALID+Y+KC
Sbjct: 84 SQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKC 143
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
D +FD + E+ +SWN +I G+ GQM A+ LFD MP R VSW+AIIS
Sbjct: 144 DNLLDAHNLFDEMHERGA---ISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIIS 200
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
GY + VF EM ++G P++++ SVL A A + +LE GK +H + G
Sbjct: 201 GYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLR 260
Query: 485 DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
+ AL + Y K G I+ + ++FD+M ++ ISW+ M+ GLA G +E+I +FE M+
Sbjct: 261 RTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMK 320
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+T+I PN +T + +L AC+H+G ++GL YF++M+ ++I+P HY +VD+L R+GRL
Sbjct: 321 QTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRL 380
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIY 664
S+A D + MP +PDS W SLLS C+T+ N ++A A+++L +L + YVLLSNIY
Sbjct: 381 SQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIY 440
Query: 665 ASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A G+W D +RKL+ K ++K+ GCS +EV N F D P
Sbjct: 441 ADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFVSGDDSKP 487
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 162/347 (46%), Gaps = 49/347 (14%)
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
E + P+E TF + KACA + LG V FK G + H+ N+LI + K +
Sbjct: 88 EDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLL 147
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A ++FD M +R +SW I+ + +G + AR +FDEMP R VSW+ +I+ Y + G
Sbjct: 148 DAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGS 207
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+A +FR+M +P+ + VL A A L AL +G +H + G+ + I NA
Sbjct: 208 YIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNA 267
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LI++Y+KCG +FD + +D V+SW++MIGG +G++ EA +F+ M + N
Sbjct: 268 LIEMYTKCGCIDQACQLFDQMRGRD---VISWSTMIGGLANHGKVREAIAIFERMKQTNI 324
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG------ 470
PN TF +L A A E+G
Sbjct: 325 K-------------------------------PNGITFVGLLSACAHAGFWEEGLMYFDT 353
Query: 471 --KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
KD H + P G+ L D ++G + + + ++MP K
Sbjct: 354 MKKDFHIE------PEIEHYGS-LVDLLGRAGRLSQALDIVEKMPMK 393
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 142/277 (51%), Gaps = 8/277 (2%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L+ N +I+ + NL +A LFD M ER +SW +ISG ++ G++ + F+ P
Sbjct: 130 LITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPN 189
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+ ++SWTA I G+ + G +AL +F ++ +G++P+E + S+ ACA++ G +
Sbjct: 190 RTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWI 249
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+ G + +CN+LI + K G +D A +FD+M RDV+SW+ ++ G +
Sbjct: 250 HMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKV 309
Query: 267 GEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSI 321
EA IF+ M + N +++ +++ +G+ EE F M + + +P +
Sbjct: 310 REAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGS 369
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
++ L L + + V K+ ++ D I +L+
Sbjct: 370 LVDLLGRAGRLSQALDI---VEKMPMKPDSKIWGSLL 403
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 147/378 (38%), Gaps = 87/378 (23%)
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
HA V+K + + F+ +ID+ + N
Sbjct: 8 HALVIKYALSQSNFLVTKMIDVCDR----------------------------------N 33
Query: 399 GQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE---------IP 449
M+ A LF + N ++A+I + + L + +ML +P
Sbjct: 34 EDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILP 93
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS---------- 499
++ TF V+ A A + GK +H + K G + AL D Y K
Sbjct: 94 DEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLF 153
Query: 500 ---------------------GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
G + +R +FD MP++ +SWT ++ G G ++++
Sbjct: 154 DEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALD 213
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV---- 594
+F EM+ I P+E +I+SVL AC+ G ++ G K+ + ++ + TC+
Sbjct: 214 VFREMQIAGIEPDEASIISVLPACAKLGALETG-KWIH----MFCARNGLLRRTCICNAL 268
Query: 595 VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHP 654
++M ++ G + +A + M D +W++++ G + + A A+ K P
Sbjct: 269 IEMYTKCGCIDQACQLFDQMRGR-DVISWSTMIGGLANHGKVREA-IAIFERMKQTNIKP 326
Query: 655 AG--YVLLSNIYASAGRW 670
G +V L + A AG W
Sbjct: 327 NGITFVGLLSACAHAGFW 344
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 30/229 (13%)
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
H +IK FL T + D ++ D++ + +F + D N + M+R +
Sbjct: 8 HALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTHNSMY 67
Query: 534 KESINLFEEM------EKTS---ITPNELTILSVLFACSHSGLVDKG----LKYFNSMEP 580
+I+ +++M +TS I P+E T V+ AC+ GL + G ++F +
Sbjct: 68 SLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKK 127
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAE 640
+ I N ++DM ++ L +A + + M E + +W ++SG +
Sbjct: 128 SHLITENA-----LIDMYTKCDNLLDAHNLFDEM-HERGAISWNGIISG-------HVRL 174
Query: 641 RAVKNLWKLAEEHP----AGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
++ L +E P + + + Y G +IDA++V + M G+
Sbjct: 175 GQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGI 223
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/576 (31%), Positives = 292/576 (50%), Gaps = 73/576 (12%)
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV--TFSSICKACAEINDFRLGLSVFG 208
SW I G A+ LFL++ S + V + + K+CA + L S+
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 209 LIFKAGFEKHVSVCNSLITLSLKM-------------GEVDLARSVFDRMEKRDVVSWTV 255
L ++G N+L+ L +K+ GE L + ++ M
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESM---------- 123
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
R++FDEM ER+ VSW+ +I + +EA + R+M R F P+
Sbjct: 124 --------------RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPD 169
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
T S VL A ++ GM VH + +K G + DVF+ ++LID+Y+ C
Sbjct: 170 TFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCT---------- 219
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
QM+ + ++FD+ + V W+++++GY ++ +
Sbjct: 220 ------------------------QMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEA 255
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F ML +G P TFSS++ A +++ L GK LH +I+ F ++F+ ++L D
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDM 315
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y K G+++ +RRVF+ + + +SWT M+ G A G E+ LFE ME ++ PN +T
Sbjct: 316 YCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITF 375
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
L+VL ACSH+GLVD G KYFNSM Y P+ H + D L R+G L EA +FI+ M
Sbjct: 376 LAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMK 435
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMN 675
+P S+ W++LL C+ +KN +AE K +++L + +V+LSN+Y+++GRW +A
Sbjct: 436 IKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQ 495
Query: 676 VRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+RK M KG++K CSW+EV+N++H F +P
Sbjct: 496 LRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHP 531
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 221/564 (39%), Gaps = 127/564 (22%)
Query: 10 SINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
S+ P +S + + L K L +LH I++G +R+ LL
Sbjct: 41 SVAPRSSVPASLPAAL---KSCAGLGLCTLAASLHALAIRSGSFADRFTANALL------ 91
Query: 70 RKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEA-----QRLFDGMPERNEVSWTAL 124
N +K L GF H N G LE A +++FD M ER+ VSW
Sbjct: 92 ------NLCIK-LPGFH---HPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWN-- 139
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
I G ++ EAL + ++ G P+
Sbjct: 140 -----------------------------TLILGCAEHKRHQEALSMVREMWRDGFMPDT 170
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
T S++ AE D + G+ V G K GF+ V V +SLI + ++D + VFD
Sbjct: 171 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
D V W +L A Y Q+G EEA +F
Sbjct: 231 FSDCDAVLWNSML-------------------------------AGYAQNGSVEEALGIF 259
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
R+M + +P FS ++ A +L LR G +HA++++ ++FIS++LID+Y KC
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKC 319
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G R VF+ I D +VSW +MI GY L+G EA
Sbjct: 320 GNVDIARRVFNGIQSPD---IVSWTAMIMGYALHGPTTEA-------------------- 356
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFP 483
F +F M L PN TF +VL A + ++ G K + + GF
Sbjct: 357 -----------FVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFV 405
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGL---AESGYAKESINL 539
+ AL DT ++GD++ + M K S W+ ++R + A+E
Sbjct: 406 PSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKK 465
Query: 540 FEEMEKTSITPNELTILSVLFACS 563
E+E S+ + ILS +++ S
Sbjct: 466 IFELEPKSMGSH--VILSNMYSAS 487
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/630 (29%), Positives = 321/630 (50%), Gaps = 105/630 (16%)
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L V + M+N ++ G L +AQ++FDGMPE+
Sbjct: 180 LYVGSSMVNFLVKRGYLADAQKVFDGMPEK------------------------------ 209
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+V+ W + I G+VQ G +E++++FL+++ G++P+ VT +++ KAC +
Sbjct: 210 -DVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQ---------- 258
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
+G +K V +C L+L MG DV T ++D++ +GD
Sbjct: 259 ------SGLKK-VGMCAHSYVLALGMGN--------------DVFVLTSLVDMYSNLGDT 297
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
G A +FD M R+ +SW+ MI+ Y Q+G E++ LFR++ +
Sbjct: 298 GSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSG--------------- 342
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD---GRLVFDSIVEKDV- 382
SG F S L+ L C +T D GR++ I+ K++
Sbjct: 343 -------SG----------------FDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELE 379
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+H+V +++ Y G +++A +F M K+N ++W+A++ G ++ + +F +M
Sbjct: 380 SHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQM 439
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
N T S++ A + SL KG+ +H I+ G+ +D + +AL D YAK G I
Sbjct: 440 QEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKI 499
Query: 503 ESSRRVFD-RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
S+ ++F+ K+ I M+ G G+ + ++ ++ M + + PN+ T +S+L A
Sbjct: 500 HSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTA 559
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
CSHSGLV++G F+SME ++++P +HY C+VD+ SR+GRL EA++ + MPF+P ++
Sbjct: 560 CSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTD 619
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
+LLSGC+T+KN + + L L + YV+LSNIYA A +W +R LM
Sbjct: 620 VLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMR 679
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+G++K G S +EV N+V+ FF D +P
Sbjct: 680 MQGMKKIPGYSLIEVGNKVYTFFASDDSHP 709
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 192/431 (44%), Gaps = 48/431 (11%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
++ V+ ++G LG AR +FD+ + MIA + ++ E RLFR M + N
Sbjct: 85 LIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEIN 144
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+ L A L GM + ++ G +++ +++++ K G D + VFD
Sbjct: 145 SYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFD 204
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ EKD VV WNS+IGGY G LF W +I
Sbjct: 205 GMPEKD---VVCWNSIIGGYVQKG-------LF----------WESI------------- 231
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
+F EM+ G P+ T +++L A + G H ++ LG DVF+ T+L D
Sbjct: 232 -QMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDM 290
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
Y+ GD S+ VFD M ++ ISW M+ G ++G ES LF + ++ + T+
Sbjct: 291 YSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTL 350
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMP 615
+S++ CS + ++ G + +S ++ + T +VDM S+ G + +A M
Sbjct: 351 VSLIRGCSQTSDLENG-RILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG 409
Query: 616 FEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAG--YVLLSNIYASA------ 667
+ + W ++L G AE A+K ++ EE A L+S ++ A
Sbjct: 410 -KKNVITWTAMLVG---LSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLT 465
Query: 668 -GRWIDAMNVR 677
GR + A +R
Sbjct: 466 KGRTVHAHFIR 476
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 140/334 (41%), Gaps = 45/334 (13%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
LLK L G H +++ G+ + ++ T L+ MY + A + +
Sbjct: 252 LLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRS 311
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP-------------------------------- 114
L+ N MI+ +Q G + E+ LF +
Sbjct: 312 LISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHS 371
Query: 115 -------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
E + V TA++ + K G ++++ F R +NVI+WTA + G QNG++ +
Sbjct: 372 CIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAED 431
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
ALKLF ++ E V N VT S+ CA + G +V + G+ + ++LI
Sbjct: 432 ALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALID 491
Query: 228 LSLKMGEVDLARSVF-DRMEKRDVVSWTVILDVFIEMGD----LGEARRIFDEMPERNEV 282
+ K G++ A +F + +DV+ ++ + G LG R+ +E + N+
Sbjct: 492 MYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQT 551
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPN 315
++ ++ + SG EE LF M R + +P
Sbjct: 552 TFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQ 585
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
S FSS+L ++ +L K +H +IIK + FL L Y+ G + +R VFD+
Sbjct: 47 SVFSSLLHQFSN--TLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQ 104
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
M+ G + E LF M I N T + L AC + L+D
Sbjct: 105 CSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKAC--TDLLDDE 162
Query: 572 LKYFNSMEPIYNIKPNGRHY-----TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
+ ME I G H + +V+ L + G L++A+ + MP E D W S+
Sbjct: 163 V----GMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMP-EKDVVCWNSI 217
Query: 627 LSG 629
+ G
Sbjct: 218 IGG 220
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/590 (30%), Positives = 311/590 (52%), Gaps = 66/590 (11%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI+ + + G++ E+ F + ISW + + GFVQNG EAL+ + ++ ++G KP
Sbjct: 358 ALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP 417
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ V SI A A + G+ + K G + + V NSL+ + K F
Sbjct: 418 DLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK----------F 467
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
M+ D IFD+MP+++ VSW+ +IA + Q+G A
Sbjct: 468 CSMKYMDC---------------------IFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 506
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR++ + S +L A + LK + S +H+++++ G+ D+ + N ++D+
Sbjct: 507 LFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDV-- 563
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
YG G ++ A +F+ + ++ VSW+++
Sbjct: 564 --------------------------------YGECGNVDYAARMFELIEFKDVVSWTSM 591
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
IS Y+ + + +F+ M +G P+ + S+L A+AS+++L+KGK++HG +I+ GF
Sbjct: 592 ISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 651
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+ L + L D YA+ G +E SR VF+ + +K+ + WT M+ G + +I+LF
Sbjct: 652 VLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRR 711
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
ME SI P+ + ++VL+ACSHSGL+++G ++ SM+ Y ++P HY C+VD+L R+
Sbjct: 712 MEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRAN 771
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSN 662
L EA F+ M EP + W +LL C+ + N+++ E A + L ++ E+P YVL+SN
Sbjct: 772 HLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSN 831
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+YA+ RW D VR M GL+K+ GCSW+EV N+VH F + +P+
Sbjct: 832 VYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQ 881
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 173/661 (26%), Positives = 292/661 (44%), Gaps = 157/661 (23%)
Query: 4 SLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKT-GIHKERYLTTRL 62
SL LF+ + F S E +L+ S+ + +G+ +H H+I + + +L+TRL
Sbjct: 98 SLTDLFANQSPSQF-SLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRL 156
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
+ MY + G L +A++LFDGMP +
Sbjct: 157 VFMYG-------------------------------KCGCLVDAEKLFDGMPHKT----- 180
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+ +W A I +V NG +L+L+ ++ SG+
Sbjct: 181 --------------------------IFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPL 214
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ TF I KAC + D R G V GL K G+ V V NS++ +
Sbjct: 215 DACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGM-------------- 260
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV-SWSVMIARYNQSGYPEEAF 301
+ + DL AR++FD MPE+ +V SW+ MI+ Y+ +G EA
Sbjct: 261 -----------------YTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEAL 303
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
RLF +M + S PNT F L A ++ GM +HA VLK +VF++NALI +Y
Sbjct: 304 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 363
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
++ G +M EA +F NM + +SW++
Sbjct: 364 ARFG----------------------------------KMGEAANIFYNMDDWDTISWNS 389
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
++SG++++ + ++EM +G+ P+ S++ ASA + G +H +K G
Sbjct: 390 MLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNG 449
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
D+ +G +L D YAK ++ +FD+MPDK+ +SWT ++ G A++G ++ LF
Sbjct: 450 LDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFR 509
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYN----------IKPNGRHY 591
E++ I + + I S+L ACS GLK +S++ I++ + NG
Sbjct: 510 EVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIHSYIIRKGLSDLVLQNG--- 559
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+VD+ G + A + F+ D +W S++S Y + +A A++ L+ L +
Sbjct: 560 --IVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS---CYVHNGLANEALE-LFHLMK 612
Query: 652 E 652
E
Sbjct: 613 E 613
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 191/443 (43%), Gaps = 74/443 (16%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF + S T + L+ + + QG +H ++K+ + ++ L+ MY
Sbjct: 305 LFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYA 364
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNE----VSWTA 123
K EA I +++ +D + N M++ +Q G EA + + M + + V+ +
Sbjct: 365 RFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 424
Query: 124 LISGFMKHGRVEE-------------------------------SMWY----FERNPFQN 148
+I+ + G SM Y F++ P ++
Sbjct: 425 IIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKD 484
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V+SWT I G QNG AL+LF ++ G+ + + SSI AC+ + +
Sbjct: 485 VVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHS 544
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
I + G D+V I+DV+ E G++
Sbjct: 545 YIIRKGLS--------------------------------DLVLQNGIVDVYGECGNVDY 572
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A R+F+ + ++ VSW+ MI+ Y +G EA LF M +P++ +LSA AS
Sbjct: 573 AARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAAS 632
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L AL+ G +H +++ G + +++ L+D+Y++CG + R VF+ I KD +V W
Sbjct: 633 LSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKD---LVLW 689
Query: 389 NSMIGGYGLNGQMEEAKELFDNM 411
SMI YG++G A +LF M
Sbjct: 690 TSMINAYGMHGCGRAAIDLFRRM 712
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 79/322 (24%)
Query: 29 KDITSQNLVIQGRALHGHLIKT----------GIHKERYLTTRLLIMYLG-----SRKSL 73
KD+ S +I G A +G + GI + + + +L+ G S K +
Sbjct: 483 KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEI 542
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+ I K L+ DLV+ N +++ + GN++ A R+F+ LI
Sbjct: 543 HSYIIRKGLS--DLVLQNGIVDVYGECGNVDYAARMFE------------LIE------- 581
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKA 193
F++V+SWT+ I +V NG + EAL+LF + E+GV+P+ ++ SI A
Sbjct: 582 ------------FKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSA 629
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
A ++ + G + G + + GF S+ ++L+
Sbjct: 630 AASLSALKKGKEIHGFLIRKGFVLEGSLASTLV--------------------------- 662
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
D++ G L ++R +F+ + ++ V W+ MI Y G A LFR+M S
Sbjct: 663 ----DMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 718
Query: 314 PNTSCFSIVLSALASLKALRSG 335
P+ F VL A + + G
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEG 740
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 255/449 (56%), Gaps = 3/449 (0%)
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
GDL A +FD++P + ++ + Y + ++ +M S PN + ++
Sbjct: 68 GDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLI 127
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
A A+ G +HAHVLK G D F N LI +Y + R VFD++ ++DV
Sbjct: 128 RACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDV- 186
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
VSW S+I GY G +++A+E+F+ MP+RN VSW+A+I+ Y++ + FA+F+ M
Sbjct: 187 --VSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
L + +K +S+L A + +LE+GK +HG I K G D L T + D Y K G +E
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304
Query: 504 SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ VF+ +P K SW M+ GLA G + +I LF+EME+ + P+ +T ++VL AC+
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
HSGLV++G YF M + +KP H+ C+VD+L R+G L EA IN MP PD+
Sbjct: 365 HSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVL 424
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
+L+ C+ + N ++ E+ K + +L + YVLL+N+YASAGRW D VRKLM ++
Sbjct: 425 GALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDR 484
Query: 684 GLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
G++K+ G S +E + V F +P+
Sbjct: 485 GVKKAPGFSMIESESGVDEFIAGGRAHPQ 513
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 187/385 (48%), Gaps = 35/385 (9%)
Query: 130 KHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSS 189
K G + ++ F++ P + + G+++ + + ++ ++L V PN+ T+
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 190 ICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD 249
+ +AC G + + K GF N+LI + + ++ AR VFD M +RD
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185
Query: 250 VVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR 309
VVSWT ++ + + G + +AR +F+ MPERN VSW+ MIA Y QS EAF LF +M
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245
Query: 310 YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKD 369
+ + + +LSA L AL G +H ++ K GIE D ++ +ID+Y KCG +
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 305
Query: 370 GRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
VF+ + +K ++ SWN MIGG ++G+ E A ELF M +
Sbjct: 306 ASEVFNELPQKGIS---SWNCMIGGLAMHGKGEAAIELFKEMER---------------- 346
Query: 430 KQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFL 488
EM+ P+ TF +VL A A +E+GK + + LG +
Sbjct: 347 -----------EMV----APDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEH 391
Query: 489 GTALTDTYAKSGDIESSRRVFDRMP 513
+ D ++G +E +R++ + MP
Sbjct: 392 FGCMVDLLGRAGLLEEARKLINEMP 416
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 155/326 (47%), Gaps = 37/326 (11%)
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
+GF L N +I+ + + +LE+A+R+FD MP+R+ VSWT+LI+G+ + G V+++ FE
Sbjct: 154 DGFSL---NNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFE 210
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRL 202
P +N +SW A I +VQ+ EA LF ++ V ++ +S+ AC +
Sbjct: 211 LMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 270
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + G I K+G E + ++I + K G ++ A VF+
Sbjct: 271 GKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFN------------------- 311
Query: 263 MGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIV 322
E+P++ SW+ MI G E A LF++M R P+ F V
Sbjct: 312 ------------ELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNV 359
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
LSA A + G H ++ ++ G++ + ++DL + G ++ R + + +
Sbjct: 360 LSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNP 419
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKEL 407
A V+ +++G ++G E +++
Sbjct: 420 DAGVL--GALVGACRIHGNTELGEQI 443
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
+G + A E+FD +P + ++ I GYL + +++ ML PNK T+ +
Sbjct: 67 SGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPL 126
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
+ A ++E+GK +H ++K GF D F L Y +E +RRVFD MP ++
Sbjct: 127 IRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDV 186
Query: 518 ISWTVMVRGLAESGYA-------------------------------KESINLFEEMEKT 546
+SWT ++ G ++ G+ E+ LF+ M
Sbjct: 187 VSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLE 246
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
++ ++ S+L AC+ G +++G K+ + I+ + + T V+DM + G L +
Sbjct: 247 NVVLDKFVAASMLSACTGLGALEQG-KWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 305
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIA 639
A + N +P + ++W ++ G + + A
Sbjct: 306 ASEVFNELP-QKGISSWNCMIGGLAMHGKGEAA 337
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYD-VFLGTALT-DTYAKSGDIESSRRVFDRMPDKNEISW 520
S +++ + K H +II+LG D +G + +KSGD+ + VFD++P + +
Sbjct: 29 SCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIY 88
Query: 521 TVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP 580
+ RG A+ I ++ M S++PN+ T ++ AC +++G K ++
Sbjct: 89 NTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEG-KQIHAHVL 147
Query: 581 IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ +G ++ M L +A ++MP + D +W SL++G
Sbjct: 148 KFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP-QRDVVSWTSLITG 195
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 89/251 (35%), Gaps = 92/251 (36%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L T + QG+ +HG++ K+GI + L T ++ MY
Sbjct: 258 MLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMY-------------------- 297
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ G LE+A +F+ +P++ SW +I G HG+ E
Sbjct: 298 -----------CKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGE----------- 335
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
A++LF ++ V P+ +TF ++ ACA G
Sbjct: 336 --------------------AAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHY 375
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
F + + L LK G ME + ++D+ G L
Sbjct: 376 FQYMTE--------------VLGLKPG-----------MEH-----FGCMVDLLGRAGLL 405
Query: 267 GEARRIFDEMP 277
EAR++ +EMP
Sbjct: 406 EEARKLINEMP 416
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 204/712 (28%), Positives = 331/712 (46%), Gaps = 108/712 (15%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
LH + KTGI + + T+L +Y A ++ + ++ + N + + +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 103 LEEAQRLFD-----------------------------------GMPERNE------VSW 121
EE RLF G ++N+
Sbjct: 83 WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL-LESGV 180
+AL+ + K G++ E++ FE + + WT+ + G+ QN EAL LF ++ + V
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+ VT S+ ACA++ + + G V GL+ + F+ + + NSL+ L K G +A +
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+F +M PE++ +SWS MIA Y + EA
Sbjct: 263 LFSKM-------------------------------PEKDVISWSTMIACYANNEAANEA 291
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF +M F+PN+ L A A + L G +H + G E D +S ALID+
Sbjct: 292 LNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDM 351
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
Y KC +EA +LF +PK++ VSW
Sbjct: 352 YMKCSCP----------------------------------DEAVDLFQRLPKKDVVSWV 377
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A++SGY ++ VF ML G P+ +L AS+ + ++ LHG +++
Sbjct: 378 ALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS 437
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
GF +VF+G +L + Y+K G + + ++F M ++ + W+ M+ G E++ +F
Sbjct: 438 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIF 497
Query: 541 EEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
++M K S + PN +T LS+L ACSH+GLV++GLK F+ M Y ++P+ H+ +VD+L
Sbjct: 498 DQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLG 557
Query: 600 RSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVL 659
R G+L +A D IN MP + W +LL C+ + N ++ E A KNL+ L H Y+L
Sbjct: 558 RIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYIL 617
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
LSNIYA G+W + +R + E+GL+K G S VEVR VH F +P
Sbjct: 618 LSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHP 669
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 241/454 (53%), Gaps = 34/454 (7%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+++ + A +F+++P W+VMI + G + L+ +M KP+
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
F L + A L L+ G +H H++ G D+F+ AL+D+Y+KCG+
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGD------------ 868
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+E A+ +FD M R+ VSW+++ISGY +
Sbjct: 869 ----------------------IEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGF 906
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F+ M SG IPN+ + SVL A ++ +L KG+ H +I+ GF +D+ + TA+ D Y+K
Sbjct: 907 FDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSK 966
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G ++ +R +FD K+ + W+ M+ G+ +++I+LF++M K + P+ +T V
Sbjct: 967 CGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCV 1026
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSHSGL+++G YF M + I +Y C+VD+L R+G+LSEA D I +MP EP
Sbjct: 1027 LSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEP 1086
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
D++ W SLL C+ + N +AE+ +L+ L H +VLLSNIYA+ RW + VRK
Sbjct: 1087 DASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRK 1146
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+M +G K G S VE NQVH F +P+
Sbjct: 1147 MMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQ 1180
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 138/595 (23%), Positives = 255/595 (42%), Gaps = 75/595 (12%)
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVIS 151
C ++ N++ G ++ G VS TALI +MK +E++ F+R P ++V+S
Sbjct: 317 CAVSRNLEEGKKIHKIAVWKGFELDFSVS-TALIDMYMKCSCPDEAVDLFQRLPKKDVVS 375
Query: 152 WTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
W A + G+ QNG +++++ +F +L G++P+ V I A +E+ F+ L + G +
Sbjct: 376 WVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV 435
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
++GF +V V SLI L K G + A +F M RDVV W+ ++ + G GEA
Sbjct: 436 RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALE 495
Query: 272 IFDEMPER-----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSA 325
IFD+M + N V++ +++ + +G EE ++F +M Y +P++ F I++
Sbjct: 496 IFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDL 555
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L + L M + + ++ I + AL+ + G ++ D +H
Sbjct: 556 LGRIGQLGKAMDI---INRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHA 612
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKR--------NDVSWSAIISGYLEHKQFDLVFA 437
+ + Y ++G+ + EL + +R + V + +L +F
Sbjct: 613 GYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQ 672
Query: 438 VFNEMLLSGE--------IPN---------------------KSTFSSVLCASAS--VAS 466
E+L E IP+ +S + ++ A + ++
Sbjct: 673 KIYELLRKLEAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKATESKYKTIGSAPGTDTISC 732
Query: 467 LEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRG 526
K H KI G YD + T Y I+++ VF+ +P+ W VM+RG
Sbjct: 733 FSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 792
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP 586
A G S+ L+ +M + + P++ L +C+ GL + I+
Sbjct: 793 FATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCA-------GLSDLQRGKVIH---- 841
Query: 587 NGRHYTC------------VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+H C +VDM ++ G + A + M D +W S++SG
Sbjct: 842 --QHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISG 893
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 175/394 (44%), Gaps = 68/394 (17%)
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
++ R++ + FE P W I GF +G +L+L+ K++E G+KP++ F
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
K+CA ++D + G + +H+ C
Sbjct: 822 PFALKSCAGLSDLQRGKVI---------HQHLVCCGC----------------------S 850
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
D+ ++D++ + GD+ AR +FD+M R+ VSW+ MI+ Y +GY E F M
Sbjct: 851 NDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLM 910
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGET 367
PN VL A +L ALR G H++V++ G E D+ ++ A++D+YSKCG
Sbjct: 911 RSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSL 970
Query: 368 KDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
R +FD KD +V W++MI YG++G +A +LFD M K
Sbjct: 971 DLARCLFDETAGKD---LVCWSAMIASYGIHGHGRKAIDLFDQMVK-------------- 1013
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVF 487
+G P+ TF+ VL A + LE+GK ++ +++ F
Sbjct: 1014 -----------------AGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARK 1055
Query: 488 LG--TALTDTYAKSGDIESSRRVFDRMPDKNEIS 519
L + D ++G + + + + MP + + S
Sbjct: 1056 LSNYACMVDLLGRAGQLSEAVDLIENMPVEPDAS 1089
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 132/316 (41%), Gaps = 69/316 (21%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
AL+ + K G +E + F++ ++++SWT+ I G+ NG++ E L F + SGV
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
PN V+ S+ AC + R G + + GFE + V +++ + K G +DLAR +
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD +D+V W S MIA Y G+ +A
Sbjct: 977 FDETAGKDLVCW-------------------------------SAMIASYGIHGHGRKAI 1005
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF QM + +P+ F+ VLSA
Sbjct: 1006 DLFDQMVKAGVRPSHVTFTCVLSAC----------------------------------- 1030
Query: 362 SKCGETKDGRLVFDSIVEKDVA--HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS- 418
S G ++G++ F + E+ V + ++ M+ G GQ+ EA +L +NMP D S
Sbjct: 1031 SHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASI 1090
Query: 419 WSAIISGYLEHKQFDL 434
W +++ H DL
Sbjct: 1091 WGSLLGACRIHNNLDL 1106
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 157/349 (44%), Gaps = 62/349 (17%)
Query: 333 RSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMI 392
RS +H+ V K GI D F + L LY+KC + R VFD +V H+ WNS +
Sbjct: 18 RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNV-HL--WNSTL 74
Query: 393 GGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKS 452
Y Q EE LF M + +GE P+
Sbjct: 75 RSYCREKQWEETLRLFHLM------------------------------ICTAGEAPDNF 104
Query: 453 TFSSVLCASASVASLEKGKDLHG---KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
T L A A + LE GK +HG K ++G D+F+G+AL + Y+K G + + +VF
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIG--SDMFVGSALVELYSKCGQMGEALKVF 162
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACSH---- 564
+ + + WT MV G ++ +E++ LF +M + + +T++SV+ AC+
Sbjct: 163 EEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNV 222
Query: 565 -SGLVDKGL---KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
+G GL + F+ P+ N ++++ +++G A + + MP E D
Sbjct: 223 KAGSCVHGLVIRREFDGDLPLVN---------SLLNLYAKTGCEKIAANLFSKMP-EKDV 272
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH--PAGYVLLSNIYASA 667
+W+++++ Y N + A A+ ++ E+ P ++S + A A
Sbjct: 273 ISWSTMIA---CYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA 318
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 118/291 (40%), Gaps = 43/291 (14%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF-D 86
LK + + +G+ +H HL+ G + ++ L+ MY +EA +V D D
Sbjct: 825 LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMY-AKCGDIEAARLVFDKMAVRD 883
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGM------PERNEV----------------SW--- 121
LV MI+ G E FD M P R + W
Sbjct: 884 LVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHS 943
Query: 122 --------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
TA++ + K G ++ + F+ ++++ W+A I + +G +
Sbjct: 944 YVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRK 1003
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLI 226
A+ LF +++++GV+P+ VTF+ + AC+ G F L+ + + +S ++
Sbjct: 1004 AIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMV 1063
Query: 227 TLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
L + G++ A + + M + D W +L +L A +I D +
Sbjct: 1064 DLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHL 1114
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 88/239 (36%), Gaps = 91/239 (38%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
Q LHG+++++G + ++ L+ +Y
Sbjct: 426 QALCLHGYVVRSGFNSNVFVGASLIELY-------------------------------S 454
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ G+L +A +LF GM R+ V W+++I+ + HGR E++ F++
Sbjct: 455 KCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ--------------- 499
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
V+N S V+PN VTF SI AC+ GL +F
Sbjct: 500 MVKN---------------STVRPNNVTFLSILSACSHAGLVEEGLKIFD---------- 534
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
R V D + D + +++D+ +G LG+A I + MP
Sbjct: 535 --------------------RMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMP 573
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/710 (27%), Positives = 336/710 (47%), Gaps = 109/710 (15%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGS---RKSLEANEIVKDLNGFDLVVHNCMINA 96
G +HG +K G+ + ++ L+ MY ++ E++ D G D+ N MI+
Sbjct: 183 GCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHD--GRDVASWNSMISG 240
Query: 97 NIQWGNLEEAQRLFDGMPE--------------------------------------RNE 118
+Q G +A LF GM
Sbjct: 241 CLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN 300
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
+ AL+ + K GRV+ ++ F ++ ISW + + +VQNG EA++ ++L
Sbjct: 301 IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRG 360
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
G +P+ S+ A + G V K + V N+L+ + +K ++ +
Sbjct: 361 GFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYS 420
Query: 239 RSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPE 298
VFDRM RI ++ +SW+ +I Y QS
Sbjct: 421 AHVFDRM-------------------------RI------KDHISWTTIITCYAQSSRHI 449
Query: 299 EAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
EA +FR+ + K + +L A + L+ + +H + ++ G+ D+ + N +I
Sbjct: 450 EALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRII 508
Query: 359 DLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVS 418
D+Y +CGE V+ S+ ++F+ + +++ V+
Sbjct: 509 DIYGECGE------VYHSL----------------------------KMFETVEQKDIVT 534
Query: 419 WSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII 478
W+++I+ Y + +F EM + P+ S+L A ++SL KGK++HG +I
Sbjct: 535 WTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLI 594
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
+ F + + ++L D Y+ G + + +VF+ + K+ + WT M+ G+ K++I+
Sbjct: 595 RRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAID 654
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDML 598
LF+ M +T +TP+ ++ L++L+ACSHS LV++G Y + M Y ++P HY CVVD+L
Sbjct: 655 LFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLL 714
Query: 599 SRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYV 658
RSG+ EA +FI SMP +P S W SLL C+ +KN ++A A L +L ++P YV
Sbjct: 715 GRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYV 774
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
L+SN++A G+W +A VR ++E+GLRK CSW+E+ N VH F + +
Sbjct: 775 LVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDN 824
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 153/648 (23%), Positives = 273/648 (42%), Gaps = 114/648 (17%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHK--ERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
+L + ++ V QG +H H + TG + + +L T+LL MY + +A + ++
Sbjct: 64 VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMP------------------------------ 114
+ N +I A + G+ EA ++ M
Sbjct: 124 RTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG 183
Query: 115 ------------ERNEVSWTALISGFMKHGRVEESMWYFE-RNPFQNVISWTAAICGFVQ 161
+R+ ALI+ + K G ++ +M FE + ++V SW + I G +Q
Sbjct: 184 CEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQ 243
Query: 162 NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSV 221
NG +AL LF + + + N T + + C E+ LG + + K+G E ++
Sbjct: 244 NGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ- 302
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
CN+L+ + K G VD A VF ++++D +SW +L ++
Sbjct: 303 CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYV-------------------- 342
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
Q+G EA +M R F+P+ +C + SA+ L L +G VHA+
Sbjct: 343 -----------QNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAY 391
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
+K ++ D + N L+D+Y KC + VFD + KD H +SW ++I Y + +
Sbjct: 392 AIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKD--H-ISWTTIITCYAQSSRH 448
Query: 402 EEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCAS 461
EA E+F K G + S+L A
Sbjct: 449 IEALEIFREAQKE-------------------------------GIKVDPMMIGSILEAC 477
Query: 462 ASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWT 521
+ + ++ K LH I+ G D+ + + D Y + G++ S ++F+ + K+ ++WT
Sbjct: 478 SGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWT 536
Query: 522 VMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M+ A SG E++ LF EM+ T + P+ + ++S+L A + KG K +
Sbjct: 537 SMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKG-KEVHGFLIR 595
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
N + +VDM S G LS A N++ + D W ++++
Sbjct: 596 RNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINA 642
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 156/345 (45%), Gaps = 50/345 (14%)
Query: 293 QSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IE-KD 350
+ G +A RL T P + VL +A+ KA+ G+ VHAH + G +E D
Sbjct: 36 KEGNLRQALRLLTSQTPGRSPPQEH-YGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDD 94
Query: 351 VFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDN 410
F++ L+ +Y KCG D RL+FD + + V SWN++IG Y +G EA
Sbjct: 95 GFLATKLLFMYGKCGRVADARLLFDGMSSRT---VFSWNALIGAYLSSGSACEA------ 145
Query: 411 MPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL---SGEIPNKSTFSSVLCASASVASL 467
V+ M L SG P+ T +SVL AS
Sbjct: 146 -------------------------LGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDG 180
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI-SWTVMVRG 526
G ++HG +K G F+ AL YAK G ++S+ RVF+ M D ++ SW M+ G
Sbjct: 181 RCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISG 240
Query: 527 LAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM---EPIYN 583
++G ++++LF M++ ++ N T + VL C+ ++ G + ++ N
Sbjct: 241 CLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN 300
Query: 584 IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
I+ N ++ M ++ GR+ A + E D +W S+LS
Sbjct: 301 IQCNA-----LLVMYTKCGRVDSALRVFREID-EKDYISWNSMLS 339
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L I + + +G+ +HG LI+ H E + + L+ MY G A ++ + D
Sbjct: 573 ILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKD 632
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWY-- 140
+V+ MINA G+ ++A LF M + + VS+ AL+ V E Y
Sbjct: 633 MVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLD 692
Query: 141 -----FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ P+Q + + G ++G + EA + F+K + +KP V + S+ AC
Sbjct: 693 MMMSTYRLEPWQEHYACVVDLLG--RSGQTEEAYE-FIKSMP--LKPKSVVWCSLLGAC 746
>gi|356532922|ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Glycine max]
Length = 611
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 299/561 (53%), Gaps = 69/561 (12%)
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
F+ PF++VI+WT+ I G VQ A+ LFL++L ++PN T SSI KAC+++ +
Sbjct: 112 FDALPFKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQAIEPNAFTLSSILKACSQLENL 171
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG ++ ++F GF + N+++ +L +D++
Sbjct: 172 HLGKTLHAVVFIRGFHSN----NNVVACAL--------------------------IDMY 201
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSC 318
+ +AR++FDE+PE + V W+ +I+ ++ EA R+F M + +
Sbjct: 202 GRSRVVDDARKVFDELPEPDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFT 261
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
F +L+A +L LR G VH V+ +G++ +VF+ ++L+D+Y KCGE R+
Sbjct: 262 FGTLLNACGNLGWLRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARV------ 315
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+FD + ++N+V+ +A++ Y + + V +
Sbjct: 316 ----------------------------VFDGLEEKNEVALTAMLGVYCHNGECGSVLGL 347
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
E + + +F +++ A + +A++ +G ++H + ++ G DV + +AL D YAK
Sbjct: 348 VREWR---SMVDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRGGWRDVVVESALVDLYAK 404
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G ++ + R+F RM +N I+W M+ G A++G +E + LFEEM K + P+ ++ ++V
Sbjct: 405 CGSVDFAYRLFSRMEARNLITWNAMIGGFAQNGRGQEGVELFEEMVKEGVRPDWISFVNV 464
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
LFACSH+GLVD+G +YF+ M Y I+P HYTC++D+L R+ + EAE + S
Sbjct: 465 LFACSHNGLVDQGRRYFDLMRREYGIRPGVVHYTCMIDILGRAELIEEAESLLESADCRY 524
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
D + WA LL C + AER K + +L + YVLL NIY + G+W +A+ +RK
Sbjct: 525 DHSRWAVLLGACTKCSDYVTAERIAKKMIQLEPDFHLSYVLLGNIYRAVGKWNEALEIRK 584
Query: 679 LMTEKGLRKSGGCSWVEVRNQ 699
LM E+G++K G SW+E Q
Sbjct: 585 LMEERGVKKVPGKSWIESEKQ 605
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 173/388 (44%), Gaps = 55/388 (14%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
KD+ + +I G KT +H L + LG +++E N
Sbjct: 117 FKDVIAWTSIISGHVQKAQ-PKTAVH--------LFLQMLG--QAIEPNAFT-----LSS 160
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
++ C N+ G A G N V ALI + + V+++ F+ P
Sbjct: 161 ILKACSQLENLHLGKTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVFDELPEP 220
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLES--GVKPNEVTFSSICKACAEINDFRLGLS 205
+ + WTA I +N EA+++F + + G++ + TF ++ AC + R+G
Sbjct: 221 DYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLLNACGNLGWLRMGRE 280
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
V G + G + +V V +SL+ + K GEV AR VFD +E+++ V+ T +L V+ G+
Sbjct: 281 VHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARVVFDGLEEKNEVALTAMLGVYCHNGE 340
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
G + E W M+ Y+ F ++ A
Sbjct: 341 CGSVLGLVRE--------WRSMVDVYS--------------------------FGTIIRA 366
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ L A+R G VH ++ G +DV + +AL+DLY+KCG +F + ++ +
Sbjct: 367 CSGLAAVRQGNEVHCQYVRRGGWRDVVVESALVDLYAKCGSVDFAYRLFSRMEARN---L 423
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPK 413
++WN+MIGG+ NG+ +E ELF+ M K
Sbjct: 424 ITWNAMIGGFAQNGRGQEGVELFEEMVK 451
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 174/395 (44%), Gaps = 68/395 (17%)
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
+KP V ++S+ +AC + + F LG + + K+GF V NSL++L K+
Sbjct: 49 QALKP--VVYASLLQACRKAHSFPLGTHLHAHVLKSGFLADRFVANSLLSLYSKLSP--- 103
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
+AR +FD +P ++ ++W+ +I+ + Q P
Sbjct: 104 ---------------------------HFSQARALFDALPFKDVIAWTSIISGHVQKAQP 136
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK-DVFISNA 356
+ A LF QM + +PN S +L A + L+ L G +HA V G + ++ A
Sbjct: 137 KTAVHLFLQMLGQAIEPNAFTLSSILKACSQLENLHLGKTLHAVVFIRGFHSNNNVVACA 196
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRND 416
LID+Y + D R VFD + E D V W ++I N + EA +F M +D
Sbjct: 197 LIDMYGRSRVVDDARKVFDELPEPD---YVCWTAVISTLARNDRFREAVRVFFAM---HD 250
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
+ G+ TF ++L A ++ L G+++HGK
Sbjct: 251 GGLGLEVDGF--------------------------TFGTLLNACGNLGWLRMGREVHGK 284
Query: 477 IIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKES 536
++ LG +VF+ ++L D Y K G++ +R VFD + +KNE++ T M+ +G
Sbjct: 285 VVTLGMKGNVFVESSLLDMYGKCGEVGCARVVFDGLEEKNEVALTAMLGVYCHNGECGSV 344
Query: 537 INLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+ L E + + +++ ACS V +G
Sbjct: 345 LGLVREWRSMV---DVYSFGTIIRACSGLAAVRQG 376
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 153/335 (45%), Gaps = 42/335 (12%)
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
+P R E S ++ P+ L Q + KP ++ +L A + G
Sbjct: 18 VPSRTE---SQILHHCKLGALPKALILLKAQAQAQALKPVV--YASLLQACRKAHSFPLG 72
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
H+HAHVLK G D F++N+L+ LYSK
Sbjct: 73 THLHAHVLKSGFLADRFVANSLLSLYSK-------------------------------- 100
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
L+ +A+ LFD +P ++ ++W++IISG+++ Q +F +ML PN T S
Sbjct: 101 -LSPHFSQARALFDALPFKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQAIEPNAFTLS 159
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGF-PYDVFLGTALTDTYAKSGDIESSRRVFDRMPD 514
S+L A + + +L GK LH + GF + + AL D Y +S ++ +R+VFD +P+
Sbjct: 160 SILKACSQLENLHLGKTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVFDELPE 219
Query: 515 KNEISWTVMVRGLAESGYAKESINLFEEMEK--TSITPNELTILSVLFACSHSGLVDKGL 572
+ + WT ++ LA + +E++ +F M + + T ++L AC + G + G
Sbjct: 220 PDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFTFGTLLNACGNLGWLRMGR 279
Query: 573 KYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ + + +K N + ++DM + G + A
Sbjct: 280 EVHGKVVTL-GMKGNVFVESSLLDMYGKCGEVGCA 313
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 43/316 (13%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMY-----LGSRKSL-----EANEI----------- 78
GR +HG ++ G+ ++ + LL MY +G + + E NE+
Sbjct: 278 GREVHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARVVFDGLEEKNEVALTAMLGVYCH 337
Query: 79 ----------------VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
+ D+ F ++ C A ++ GN Q + G R+ V +
Sbjct: 338 NGECGSVLGLVREWRSMVDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRG-GWRDVVVES 396
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+ + K G V+ + F R +N+I+W A I GF QNG E ++LF ++++ GV+P
Sbjct: 397 ALVDLYAKCGSVDFAYRLFSRMEARNLITWNAMIGGFAQNGRGQEGVELFEEMVKEGVRP 456
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARSV 241
+ ++F ++ AC+ G F L+ + G V +I + + ++ A S+
Sbjct: 457 DWISFVNVLFACSHNGLVDQGRRYFDLMRREYGIRPGVVHYTCMIDILGRAELIEEAESL 516
Query: 242 FDRMEKR-DVVSWTVILDVFIEMGDLGEARRIFDEMPERN---EVSWSVMIARYNQSGYP 297
+ + R D W V+L + D A RI +M + +S+ ++ Y G
Sbjct: 517 LESADCRYDHSRWAVLLGACTKCSDYVTAERIAKKMIQLEPDFHLSYVLLGNIYRAVGKW 576
Query: 298 EEAFRLFRQMTRYSFK 313
EA + + M K
Sbjct: 577 NEALEIRKLMEERGVK 592
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 289/575 (50%), Gaps = 65/575 (11%)
Query: 137 SMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAE 196
S F F N+ + I GFV N E L LFL + + G+ + TF + KAC
Sbjct: 64 SFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTR 123
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
++ +LG+ + L+ K GF DV + T +
Sbjct: 124 ASNRKLGIDLHSLVVKCGF-------------------------------NHDVAAMTSL 152
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
L ++ G L +A ++F+E+PER+ V+W+ + + Y +G EA LF++M +P++
Sbjct: 153 LSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDS 212
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
VLSA + L SG + H+ ++ ++K+ F+ L++LY+KCG+ + R VFDS
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDS 272
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ EKD +V+W++MI GY N +E E F M + N L+ QF +V
Sbjct: 273 MGEKD---IVTWSTMIQGYASNSFPKEGIEFFLQMLQEN-----------LKPDQFSIV- 317
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
L + AS+ +L+ G+ I + F ++F+ AL D Y
Sbjct: 318 -------------------GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
AK G + VF M +K+ + + GLA++G+ K S +F + EK I+P+ T L
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
+L C H+GL+ GL++FN++ +Y +K HY C+VD+ R+G L +A I MP
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM 478
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
P++ W +LLSGC+ K+ Q+AE +K L L + YV LSNIY+ +GRW +A V
Sbjct: 479 RPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEV 538
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R +M KG++K G SW+E+ VH F +P
Sbjct: 539 RDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHP 573
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 181/409 (44%), Gaps = 71/409 (17%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+L+S + GR+ ++ FE P ++V++WTA G+ G EA+ LF K++E GV+
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ + AC + D G + + + +K+ V +L+ L K G+++ ARSV
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M ++D+V +WS MI Y + +P+E
Sbjct: 270 FDSMGEKDIV-------------------------------TWSTMIQGYASNSFPKEGI 298
Query: 302 RLFRQMTRYSFKPNTSCFSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
F QM + + KP+ FSIV LS+ ASL AL G + + + ++F++NALID
Sbjct: 299 EFFLQMLQENLKPDQ--FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG G VF + EKD +V N+ I G NG ++
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKD---IVIMNAAISGLAKNGHVK----------------- 396
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-I 478
L FAVF + G P+ STF +LC ++ G I
Sbjct: 397 --------------LSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRG 526
V + D + ++G ++ + R+ MP + N I W ++ G
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 177/444 (39%), Gaps = 104/444 (23%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LH ++K G + + T LL +Y GS + +A+++ +++ +V + +
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTT 189
Query: 100 WGNLEEAQRLFDGMPE---------------------------------------RNEVS 120
G EA LF M E +N
Sbjct: 190 AGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFV 249
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
T L++ + K G++E++ F+ +++++W+ I G+ N F E ++ FL++L+ +
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENL 309
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP++ + +CA + LG LI + F ++ + N+LI + K G +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VF M+++D+ V + I+ ++G+ + +
Sbjct: 370 VFKEMKEKDI-------------------------------VIMNAAISGLAKNGHVKLS 398
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F +F Q + P+ S F +L VHA +++ G+ NA+ +
Sbjct: 399 FAVFGQTEKLGISPDGSTFLGLLCGC-----------VHAGLIQDGLR----FFNAISCV 443
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR-NDVSW 419
Y+ +++ V H + M+ +G G +++A L +MP R N + W
Sbjct: 444 YA---------------LKRTVEH---YGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 420 SAIISGYLEHKQFDLVFAVFNEML 443
A++SG K L V E++
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELI 509
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 282/544 (51%), Gaps = 43/544 (7%)
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
AL + + + ++ + S+ KAC++I+ R+G + G K G V V N+L+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVM 287
+ + G + AR +FD+M +RDVVSW+ ++ +I + F +R+ VSW+ M
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITL---------FYGFSQRSIVSWTAM 203
Query: 288 IARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
IA Y + EE RLF +M + PN ++ + + A++ G +HA++L+ G
Sbjct: 204 IAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGF 263
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ ++ AL+D+Y KCGE + A+ +
Sbjct: 264 GMSLALATALVDMYGKCGEIR----------------------------------SARAI 289
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD+M ++ ++W+A+IS Y + D F +F +M +G PN+ T S+L A +L
Sbjct: 290 FDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGAL 349
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+ GK H I K G DV L TAL D YAK GDI ++R+F D++ +W VM+ G
Sbjct: 350 DMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGY 409
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
GY ++++ LF EME + PN++T + L ACSH+GLV +G F M + + P
Sbjct: 410 GMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPK 469
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C+VD+L R+G L EA I SMP P+ W ++L+ CK +KN + E A + L
Sbjct: 470 VEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELL 529
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
L ++ VL+SNIYA+A RW D +RK + + G++K G S +EV VH F
Sbjct: 530 ALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGD 589
Query: 708 DHNP 711
+P
Sbjct: 590 TAHP 593
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 182/349 (52%), Gaps = 17/349 (4%)
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
+P A + M + + ++ VL A + + R G +H +K G+ DVF+ N
Sbjct: 89 HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
AL+ +YS+CG RL+FD + E+D VVSW++MI Y LF +R+
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERD---VVSWSTMIRAY---------ITLFYGFSQRS 196
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
VSW+A+I+GY+ + +F M+ PN T S++ + V +++ GK LH
Sbjct: 197 IVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHA 256
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
I++ GF + L TAL D Y K G+I S+R +FD M +K+ ++WT M+ A++
Sbjct: 257 YILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDY 316
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
+ LF +M + PNELT++S+L C+ +G +D G K+F++ ++ + T ++
Sbjct: 317 AFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALI 375
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
DM ++ G +S A+ S + D W +++G Y E+A+K
Sbjct: 376 DMYAKCGDISGAQRLF-SEAIDRDICTWNVMMAG---YGMHGYGEKALK 420
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 225/501 (44%), Gaps = 109/501 (21%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + ++ G+ +HG +K G+ + ++ L+ MY
Sbjct: 115 VLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMY-------------------- 154
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWY-FERNP 145
+ G+L A+ LFD M ER+ VSW+ +I ++ +++Y F +
Sbjct: 155 -----------SECGSLVSARLLFDKMSERDVVSWSTMIRAYI-------TLFYGFSQ-- 194
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++++SWTA I G+++ E +LF++++E V PN++T S+ +C + +LG
Sbjct: 195 -RSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKR 253
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I + GF +++ +L+ + K GE+ AR++FD M+ +DV++WT
Sbjct: 254 LHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWT----------- 302
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
MI+ Y Q+ + AF+LF QM +PN +LS
Sbjct: 303 --------------------AMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSL 342
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A AL G HA++ K G+E DV + ALID+Y+KCG+ + +F +++D+
Sbjct: 343 CAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDIC-- 400
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+WN M+ GYG++G E+A +L F EM
Sbjct: 401 -TWNVMMAGYGMHGYGEKALKL-------------------------------FTEMETL 428
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIES 504
G PN TF L A + + +GK L K+I G V + D ++G ++
Sbjct: 429 GVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDE 488
Query: 505 SRRVFDRMPDKNEIS-WTVMV 524
+ ++ + MP I+ W M+
Sbjct: 489 AYKMIESMPVTPNIAIWGAML 509
>gi|147767158|emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 205/658 (31%), Positives = 328/658 (49%), Gaps = 56/658 (8%)
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
LT + Y S L A I L + V N +++ + +L QR+F+ + +
Sbjct: 66 LTACANLRYAASGNQLHAYSIQTGLKAYTHV-GNTLLSFYAKSKDLVSVQRVFNEIENPD 124
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
SWT L+S K G++ + F + P + W A I G +N + AL LF ++ +
Sbjct: 125 VYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQ 184
Query: 178 SGVKPNEVTFSSICKACA-EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
GV+ ++ TF+S+ C+ E+ DF G V L+ K GF SV N+L+T+ G+V
Sbjct: 185 LGVRHDKYTFASVLSLCSLELLDF--GREVHTLVIKTGFLVRASVINALLTMYFNSGKVA 242
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A VF+ E TV ++++++VMI G
Sbjct: 243 DAYEVFEEAES------TV-----------------------HDDITFNVMIGGLASVGR 273
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
EEA +F++M +P F +S ++S + R VHA +K+G E +SNA
Sbjct: 274 DEEALIMFKEMQEACLRPTELTF---VSVMSSCSSARVSHQVHAQAIKMGFEACTPVSNA 330
Query: 357 LIDLYSKCGETKDGRLVFD-----------SIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
+ +YS CG +VFD + ++ A + IG + + E
Sbjct: 331 AMTMYSSCGNLHAVHMVFDRLGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIV 390
Query: 406 ELFDNMPKRNDVSW-----SAIISGYLEHKQFDLVFA---VFNEMLLSGEIPNKSTFSSV 457
++F + +N ++ +A++S + +H Q + + F E+L+S PN T S V
Sbjct: 391 KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQGLEQFYELLMSTLKPNAYTLSIV 450
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
L AS+++L GK +HG I++ G LG AL YAK GD++ S R+F+ M ++
Sbjct: 451 LSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDI 510
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW M+ A+ G KE+++ F+ M+ + + P++ T +VL ACSH+GLVD G + FN
Sbjct: 511 VSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFN 570
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
SM Y +P H +C+VD+L R+G L EAE INS + S+ W +L S C + N
Sbjct: 571 SMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNL 630
Query: 637 QIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWV 694
++ L ++ + PA YVLLSNIYA+AG+W +A N R LM + + K GCSW+
Sbjct: 631 RLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWI 688
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 219/499 (43%), Gaps = 68/499 (13%)
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFR 201
+N + +I + ++ + +++LF+++ S +KP+ T SS ACA +
Sbjct: 17 KNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAA 76
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G + + G + + V N+L++ K ++ + VF+ +E DV SWT +L
Sbjct: 77 SGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACT 136
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
++G +G A +F++ P V W+ +I ++ + E A LFR+M + + + F+
Sbjct: 137 KLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFAS 196
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
VLS L SL+ L G VH V+K G + NAL+ +Y G+ D VF+ E
Sbjct: 197 VLS-LCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEE-AEST 254
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V +++N MIGG G+ EEA +F E
Sbjct: 255 VHDDITFNVMIGGLASVGRDEEA-------------------------------LIMFKE 283
Query: 442 MLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
M + P + TF SV+ C+SA V+ +H + IK+GF + A Y+
Sbjct: 284 MQEACLRPTELTFVSVMSSCSSARVS-----HQVHAQAIKMGFEACTPVSNAAMTMYSSC 338
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G++ + VFDR+ + + + +I F +M++ I P+E TI S+L
Sbjct: 339 GNLHAVHMVFDRLGN-----------------FYRLAILAFLQMQRAGIEPDEFTIGSLL 381
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA----EDFINSM- 614
+ +V K F ++ + +V S+ G++ +A E F +
Sbjct: 382 ASSESLEIV----KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQGLEQFYELLM 437
Query: 615 -PFEPDSNAWASLLSGCKT 632
+P++ + +LS C +
Sbjct: 438 STLKPNAYTLSIVLSICAS 456
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 170/428 (39%), Gaps = 72/428 (16%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG--FDLVVHNCMINAN 97
GR +H +IKTG + LL MY S K +A E+ ++ D + N MI
Sbjct: 209 GREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGL 268
Query: 98 IQWGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEES-------MWYFERNPF 146
G EEA +F M E E+++ +++S RV M + P
Sbjct: 269 ASVGRDEEALIMFKEMQEACLRPTELTFVSVMSS-CSSARVSHQVHAQAIKMGFEACTPV 327
Query: 147 QNVISWTAAICGFVQ---------NGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
N + CG + F A+ FL++ +G++P+E T S+ + +
Sbjct: 328 SNAAMTMYSSCGNLHAVHMVFDRLGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESL 387
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA------------------- 238
++ L+ K G + V N+L++ K G+++ A
Sbjct: 388 EIVKM---FQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQGLEQFYELLMSTLKPNA 444
Query: 239 -------------------RSVFDRMEKRDVVSWTVILDVFIEM----GDLGEARRIFDE 275
+ + + + V S T + + I M GDL + RIF+
Sbjct: 445 YTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNV 504
Query: 276 MPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRS 334
M R+ VSW+ MI+ Y Q G +EA F+ M KP+ + F+ VLSA + +
Sbjct: 505 MNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDD 564
Query: 335 GMHV-HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIG 393
G + ++ V G E + ++DL + G ++ + +S K V+ + W ++
Sbjct: 565 GTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSI--WWTLFS 622
Query: 394 GYGLNGQM 401
+G +
Sbjct: 623 ACAAHGNL 630
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
G+ +HG+++++G+ L L+ MY + I +NG D+V N MI+A
Sbjct: 462 HGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYA 521
Query: 99 QWGNLEEAQRLFDGMPER-----NEVSWTALISGFMKHGRVEESMWYFER-------NPF 146
Q G +EA F M + ++ ++TA++S G V++ F P
Sbjct: 522 QHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPG 581
Query: 147 QNVISWTAAICGFVQNGFSFEALKLF----LKLLESGVKPNEVTFSSICKACAEINDFRL 202
+ +S + G + G+ EA +L LK++ S + ++ ACA + RL
Sbjct: 582 ADHLSCIVDLLG--RAGYLEEAERLINSKHLKIVSS-------IWWTLFSACAAHGNLRL 632
Query: 203 GLSVFGLIFK 212
G V G + +
Sbjct: 633 GRIVAGFLLE 642
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,016,763,218
Number of Sequences: 23463169
Number of extensions: 452907839
Number of successful extensions: 1317714
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9345
Number of HSP's successfully gapped in prelim test: 2876
Number of HSP's that attempted gapping in prelim test: 1022436
Number of HSP's gapped (non-prelim): 88443
length of query: 712
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 562
effective length of database: 8,839,720,017
effective search space: 4967922649554
effective search space used: 4967922649554
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)