BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005136
(712 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/712 (31%), Positives = 381/712 (53%), Gaps = 78/712 (10%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
L S + F +++C I S+ I R +H +IK+G E ++ RL
Sbjct: 13 LSSFTDSSPFAKLLDSC------IKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL----- 61
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISG 127
I+A + G+LE+ +++FD MP+RN +W ++++G
Sbjct: 62 --------------------------IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTG 95
Query: 128 FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTF 187
K G ++E+ F P ++ +W + + GF Q+ EAL F + + G NE +F
Sbjct: 96 LTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSF 155
Query: 188 SSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEK 247
+S+ AC+ +ND G+ V LI K+ F V + ++L+
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV--------------------- 194
Query: 248 RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
D++ + G++ +A+R+FDEM +RN VSW+ +I + Q+G EA +F+ M
Sbjct: 195 ----------DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 308 TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEKDVFISNALIDLYSKCGE 366
+P+ + V+SA ASL A++ G VH V+K + D+ +SNA +D+Y+KC
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
K+ R +FDS+ + +V++ SMI GY + + A+ +F M +RN VSW+A+I+GY
Sbjct: 305 IKEARFIFDSM---PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY-- 484
++ + + ++F + P +F+++L A A +A L G H ++K GF +
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 421
Query: 485 ----DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D+F+G +L D Y K G +E VF +M +++ +SW M+ G A++GY E++ LF
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
EM ++ P+ +T++ VL AC H+G V++G YF+SM + + P HYTC+VD+L R
Sbjct: 482 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G L EA+ I MP +PDS W SLL+ CK ++N + + + L ++ + YVLL
Sbjct: 542 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLL 601
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
SN+YA G+W D MNVRK M ++G+ K GCSW++++ H F K +P+
Sbjct: 602 SNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPR 653
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 370/630 (58%), Gaps = 3/630 (0%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F + + N ++N + G A++LFD MP R SW ++S + K G ++ + +F++
Sbjct: 47 FSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
P ++ +SWT I G+ G +A+++ +++ G++P + T +++ + A G
Sbjct: 107 PQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGK 166
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V I K G +VSV NSL+ + K G+ +A+ VFDRM RD+ SW ++ + +++G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF-KPNTSCFSIVL 323
+ A F++M ER+ V+W+ MI+ +NQ GY A +F +M R S P+ + VL
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
SA A+L+ L G +H+H++ G + + NALI +YS+CG + R + + KD+
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEML 443
+ + +++ GY G M +AK +F ++ R+ V+W+A+I GY +H + +F M+
Sbjct: 347 -IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 444 LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE 503
G+ PN T +++L ++S+ASL GK +HG +K G Y V + AL YAK+G+I
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 504 SSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
S+ R FD + +++ +SWT M+ LA+ G+A+E++ LFE M + P+ +T + V AC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
+H+GLV++G +YF+ M+ + I P HY C+VD+ R+G L EA++FI MP EPD
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W SLLS C+ +KN + + A + L L E+ Y L+N+Y++ G+W +A +RK M +
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
++K G SW+EV+++VH F + +P+
Sbjct: 646 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPE 675
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 155/598 (25%), Positives = 254/598 (42%), Gaps = 116/598 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L + + + G+ +H ++K G+ ++ LL MY + A + + D
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
+ N MI ++Q G ++ A F+ M ER+ V+W ++ISGF
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN----------------- 254
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLGLS 205
Q G+ AL +F K+L +S + P+ T +S+ ACA + +G
Sbjct: 255 --------------QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRD--VVSWTVILDVFIEM 263
+ I GF+ V N+LI++ + G V+ AR + ++ +D + +T +LD +I++
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
GD+ +A+ IF + +R+ V+W+ MI Y Q G EA LFR M +PN+ + +L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEKDV 382
S +SL +L G +H +K G V +SNALI +Y+K G FD I E+D
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD- 479
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
VSW SMI +G EEA ELF+ M
Sbjct: 480 --TVSWTSMIIALAQHGHAEEALELFET-------------------------------M 506
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
L+ G P+ T+ V A +G +
Sbjct: 507 LMEGLRPDHITYVGVFSAC-----------------------------------THAGLV 531
Query: 503 ESSRRVFDRMPDKNEI-----SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
R+ FD M D ++I + MV +G +E+ E +EK I P+ +T S
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ---EFIEKMPIEPDVVTWGS 588
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKP-NGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L AC +D G + E + ++P N Y+ + ++ S G+ EA SM
Sbjct: 589 LLSACRVHKNIDLGKV---AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 68/356 (19%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
VH V+K G+ V++ N L+++YSK G R +FD E + SWN+++ Y
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFD---EMPLRTAFSWNTVLSAYSK 92
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
G M+ E FD +P+R+ VSW+ +I GY Q+ V +M+ G P + T ++V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR------ 511
L + A+ +E GK +H I+KLG +V + +L + YAK GD ++ VFDR
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 512 -------------------------MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
M +++ ++W M+ G + GY ++++F +M +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 547 S-ITPNELTILSVLFACS-----------HSGLVDKGLK----YFNSMEPIYN------- 583
S ++P+ T+ SVL AC+ HS +V G N++ +Y+
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 584 ----IKPNGRH------YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
I+ G +T ++D + G +++A++ S+ + D AW +++ G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK-DRDVVAWTAMIVG 387
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/698 (32%), Positives = 378/698 (54%), Gaps = 50/698 (7%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
LCL TS L RA+HG++I G ++ RL+ +Y S +
Sbjct: 21 LCLPLRRTSLQL---ARAVHGNIITFGFQPRAHILNRLIDVYCKSSE------------- 64
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
L A++LFD + E ++++ T ++SG+ G + + FE+
Sbjct: 65 ------------------LNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKA 106
Query: 145 P--FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI-NDFR 201
P ++ + + A I GF N + A+ LF K+ G KP+ TF+S+ A + +D +
Sbjct: 107 PVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEK 166
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE----VDLARSVFDRMEKRDVVSWTVIL 257
+ K+G SV N+L+++ K + AR VFD + ++D SWT ++
Sbjct: 167 QCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMM 226
Query: 258 DVFIEMG--DLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
+++ G DLGE + + M + + V+++ MI+ Y G+ +EA + R+M +
Sbjct: 227 TGYVKNGYFDLGE--ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + V+ A A+ L+ G VHA+VL+ + N+L+ LY KCG+ + R +F
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
+ + KD+ VSWN+++ GY +G + EAK +F M ++N +SW +ISG E+ +
Sbjct: 344 EKMPAKDL---VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F+ M G P FS + + A + + G+ H +++K+GF + G AL
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
YAK G +E +R+VF MP + +SW ++ L + G+ E+++++EEM K I P+ +T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+L+VL ACSH+GLVD+G KYF+SME +Y I P HY ++D+L RSG+ S+AE I S+
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
PF+P + W +LLSGC+ + N ++ A L+ L EH Y+LLSN++A+ G+W +
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVA 640
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
VRKLM ++G++K CSW+E+ QVH F +P+
Sbjct: 641 RVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 170/414 (41%), Gaps = 91/414 (21%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERY---LTTRLLIMYLGSR 70
E ++ S I C + L+ G+ +H ++++ +E + L+ +Y
Sbjct: 286 EFTYPSVIRAC-------ATAGLLQLGKQVHAYVLR----REDFSFHFDNSLVSLYYKCG 334
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K EA I + + DLV N +++ + G++ EA+ +F M E+N +SW +IS
Sbjct: 335 KFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS---- 390
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
G +NGF E LKLF + G +P + FS
Sbjct: 391 ---------------------------GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
K+CA + + G + K GF+ +S N+LIT+ K G V+ AR VF M D
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQ 306
VSW ++ + G EA +++EM ++ + ++ ++ + +G ++ + F
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 307 M-TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
M T Y P ++ LIDL + G
Sbjct: 544 METVYRIPPGADHYA-----------------------------------RLIDLLCRSG 568
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME----EAKELFDNMPKRN 415
+ D V +S+ K A + W +++ G ++G ME A +LF +P+ +
Sbjct: 569 KFSDAESVIESLPFKPTAEI--WEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRR 507
I N+ + LC SL+ + +HG II GF + L D Y KS ++ +R+
Sbjct: 11 IANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQ 70
Query: 508 VFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
+FD + + ++I+ T MV G SG + +FE+
Sbjct: 71 LFDEISEPDKIARTTMVSGYCASGDITLARGVFEK 105
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/647 (33%), Positives = 358/647 (55%), Gaps = 50/647 (7%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y+ + + EA + K + + V +N MI+ ++ G E A++LFD MPER+ VSW +I
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G++++ + ++ FE P ++V SW + G+ QNG +A +F ++ E N+V
Sbjct: 134 KGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDV 189
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+++++ A + + ++FK+ + N L+ +K ++ AR FD M
Sbjct: 190 SWNALLSAYVQNSKMEEAC----MLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 246 EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFR 305
RDVVSW I+ + + G + EAR++FDE P ++ +W+ M++ Y Q+ EEA LF
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 306 QMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCG 365
+M E++ NA++ Y +
Sbjct: 306 KMP---------------------------------------ERNEVSWNAMLAGYVQGE 326
Query: 366 ETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISG 425
+ + +FD + ++V+ +WN+MI GY G++ EAK LFD MPKR+ VSW+A+I+G
Sbjct: 327 RMEMAKELFDVMPCRNVS---TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
Y + +F +M G N+S+FSS L A V +LE GK LHG+++K G+
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
F+G AL Y K G IE + +F M K+ +SW M+ G + G+ + ++ FE M++
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P++ T+++VL ACSH+GLVDKG +YF +M Y + PN +HY C+VD+L R+G L
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
+A + + +MPFEPD+ W +LL + + N ++AE A ++ + E+ YVLLSN+YA
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
S+GRW D +R M +KG++K G SW+E++N+ H F + +P+
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 670
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 237/518 (45%), Gaps = 70/518 (13%)
Query: 6 RSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHG------HLIKTGIHKERYLT 59
R LF I PE +D+ S N ++ G A +G + K
Sbjct: 146 RELFEIMPE--------------RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSW 191
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
LL Y+ + K EA + K + LV NC++ ++ + EA++ FD M R+ V
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV 251
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +I+G+ + G+++E+ F+ +P Q+V +WTA + G++QN EA +LF K+ E
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER- 310
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
NEV+++++ + + +F ++ ++VS N++IT + G++ A+
Sbjct: 311 ---NEVSWNAMLAGYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYAQCGKISEAK 363
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
++FD+M KRD VSW MIA Y+QSG+ E
Sbjct: 364 NLFDKMPKRDPVSWAA-------------------------------MIAGYSQSGHSFE 392
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A RLF QM R + N S FS LS A + AL G +H ++K G E F+ NAL+
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRN 415
+Y KCG ++ +F + KD +VSWN+MI GY +G E A F++M K +
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKD---IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLH 474
D + A++S D F M G +PN ++ ++ LE D H
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE---DAH 566
Query: 475 GKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+ + F D + L G+ E + D++
Sbjct: 567 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKI 604
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 325/573 (56%), Gaps = 49/573 (8%)
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
V++W + I F +AL F+++ SG P+ F S+ K+C + D R G SV G
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 209 LIFKAGFEKHVSVCNSLITLSLK---MGEVDLARSVFDRMEKR-------DVVSWTVILD 258
I + G + + N+L+ + K MG +VFD M +R DV + T I+
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
I+ RR+F+ MP ++ VS++ +IA Y QSG E+A R+ R+M KP++
Sbjct: 190 FGID-----SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
S VL + + G +H +V++ GI+ DV+I ++L+D+Y+K
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK--------------- 289
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
+ ++E+++ +F + R+ +SW+++++GY+++ +++ +
Sbjct: 290 -------------------SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRL 330
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F +M+ + P FSSV+ A A +A+L GK LHG +++ GF ++F+ +AL D Y+K
Sbjct: 331 FRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK 390
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G+I+++R++FDRM +E+SWT ++ G A G+ E+++LFEEM++ + PN++ ++V
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
L ACSH GLVD+ YFNSM +Y + HY V D+L R+G+L EA +FI+ M EP
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRK 678
+ W++LLS C +KN ++AE+ + ++ + E+ YVL+ N+YAS GRW + +R
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRL 570
Query: 679 LMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
M +KGLRK CSW+E++N+ H F +P
Sbjct: 571 RMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHP 603
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 188/410 (45%), Gaps = 70/410 (17%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G ++HG +++ G+ + Y L+ MY L G + + I
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMY-------------AKLLG---------MGSKIS 161
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISG---FMKHGRVEESMWYFERNPFQNVISWTAAI 156
GN+ FD MP+R S + M G ++ FE P ++V+S+ I
Sbjct: 162 VGNV------FDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTII 214
Query: 157 CGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFE 216
G+ Q+G +AL++ ++ + +KP+ T SS+ +E D G + G + + G +
Sbjct: 215 AGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID 274
Query: 217 KHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEM 276
V + +SL+ + K ++ + VF R+ RD +SW ++ +++ G
Sbjct: 275 SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG------------ 322
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
RYN EA RLFRQM KP FS V+ A A L L G
Sbjct: 323 -------------RYN------EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
+H +VL+ G ++FI++AL+D+YSKCG K R +FD + +V VSW ++I G+
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM---NVLDEVSWTAIIMGHA 420
Query: 397 LNGQMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEM 442
L+G EA LF+ M ++ N V++ A+++ D + FN M
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 192/394 (48%), Gaps = 12/394 (3%)
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F R + S ++++ ++ + L EA +F + ++W +I + +A
Sbjct: 31 FIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKAL 90
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
F +M P+ + F VL + + LR G VH ++++G++ D++ NAL+++Y
Sbjct: 91 ASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMY 150
Query: 362 SKC---GETKDGRLVFDSIVEKDV---AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+K G VFD + ++ V + I +G+ + + +F+ MP+++
Sbjct: 151 AKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI----DSVRRVFEVMPRKD 206
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
VS++ II+GY + ++ + EM + P+ T SSVL + + KGK++HG
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
+I+ G DV++G++L D YAKS IE S RVF R+ ++ ISW +V G ++G E
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNE 326
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
++ LF +M + P + SV+ AC+H + G K + N + +V
Sbjct: 327 ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG-KQLHGYVLRGGFGSNIFIASALV 385
Query: 596 DMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
DM S+ G + A + M D +W +++ G
Sbjct: 386 DMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMG 418
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 164/355 (46%), Gaps = 30/355 (8%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
++L+ + K R+E+S F R ++ ISW + + G+VQNG EAL+LF +++ + VK
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P V FSS+ ACA + LG + G + + GF ++ + ++L+ + K G + AR +
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYP 297
FDRM D VSWT I+ G EA +F+EM + N+V++ ++ + G
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 298 EEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
+EA+ F MT+ Y ++ V L L + + K+ +E + +
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA---YNFISKMCVEPTGSVWST 517
Query: 357 LIDLYSKCGETKDGRL---VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
L+ S C K+ L V + I D ++ ++ M Y NG+ +E +L M K
Sbjct: 518 LL---SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 414 RN-----DVSW-------SAIISGYLEHKQFD----LVFAVFNEMLLSGEIPNKS 452
+ SW +SG H D + AV +M G + + S
Sbjct: 575 KGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 323/589 (54%), Gaps = 66/589 (11%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
L+ + + R++ + FE P ++ +++ I G+ ++G E++ LFLK+ +SG +P+
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
+ TFS + KA ++DF LG + L GF + SV N
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ------------------- 290
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
ILD + + + E R +FDEMPE + VS++V+I+ Y+Q+ E +
Sbjct: 291 ------------ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 304 FRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSK 363
FR+M F F+ +LS A+L +L+ G +H L + + + N+L+D+Y+K
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398
Query: 364 CGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAII 423
C EEA+ +F ++P+R VSW+A+I
Sbjct: 399 CE----------------------------------MFEEAELIFKSLPQRTTVSWTALI 424
Query: 424 SGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFP 483
SGY++ +F +M S ++STF++VL ASAS ASL GK LH II+ G
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 484 YDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEM 543
+VF G+ L D YAK G I+ + +VF+ MPD+N +SW ++ A++G + +I F +M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 544 EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGR 603
++ + P+ ++IL VL ACSH G V++G +YF +M PIY I P +HY C++D+L R+GR
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 604 LSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-EHPAGYVLLSN 662
+EAE ++ MPFEPD W+S+L+ C+ +KN+ +AERA + L+ + + A YV +SN
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSN 664
Query: 663 IYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
IYA+AG W +V+K M E+G++K SWVEV +++H F +P
Sbjct: 665 IYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 250/562 (44%), Gaps = 83/562 (14%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I+K D N ++ ++ G + A++++D MP +N VS +ISG +K G V +
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSA 98
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG--VKPNEVTFSSICKACA 195
F+ P + V++WT + + +N EA KLF ++ S P+ VTF+++ C
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ V K GF+ N +T+S V
Sbjct: 159 DAVPQNAVGQVHAFAVKLGFDT-----NPFLTVS------------------------NV 189
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPN 315
+L + E+ L A +F+E+PE++ V+++ +I Y + G E+ LF +M + +P+
Sbjct: 190 LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249
Query: 316 TSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
FS VL A+ L G +HA + G +D + N ++D YSK + R++FD
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLV 435
+ E D VS+N +IS Y + Q++
Sbjct: 310 EMPELD---FVSYN-------------------------------VVISSYSQADQYEAS 335
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F EM G F+++L +A+++SL+ G+ LH + + + +G +L D
Sbjct: 336 LHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDM 395
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTI 555
YAK E + +F +P + +SWT ++ G + G + LF +M +++ ++ T
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 556 LSVLFACSH--SGLVDKGLKYF----NSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
+VL A + S L+ K L F ++E +++ + +VDM ++ G + +A
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFS-------GSGLVDMYAKCGSIKDAVQ 508
Query: 610 FINSMPFEPDSNA--WASLLSG 629
M PD NA W +L+S
Sbjct: 509 VFEEM---PDRNAVSWNALISA 527
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 44/345 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + + G+ LH + TG ++ + ++L Y + LE + ++ D
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALIS-----GFMKHGR---- 133
V +N +I++ Q E + F M +R + ++S ++ GR
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 134 --------------------------VEESMWYFERNPFQNVISWTAAICGFVQNGFSFE 167
EE+ F+ P + +SWTA I G+VQ G
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 168 ALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLIT 227
LKLF K+ S ++ ++ TF+++ KA A LG + I ++G ++V + L+
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 495
Query: 228 LSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVS 283
+ K G + A VF+ M R+ VSW ++ + GD A F +M E + VS
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALA 327
++ + G+ E+ F+ M+ Y P ++ +L L
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 47/212 (22%)
Query: 98 IQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAIC 157
I+ GNLE N S + L+ + K G +++++ FE P +N +SW A I
Sbjct: 479 IRSGNLE------------NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
NG A+ F K++ESG++P+ V+ + AC+ G F +
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM------- 579
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
++ K+ + +LD+ G EA ++ DEMP
Sbjct: 580 ---------------------SPIYGITPKKK--HYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 278 -ERNEVSWSVMI----ARYNQSGYPEEAFRLF 304
E +E+ WS ++ NQS A +LF
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLF 648
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
S A+ + + +IIK GF D + + + G + ++R+V+D MP KN +S
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 523 MVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
M+ G ++G + +LF+ M ++T +T TIL +A + D+ K F M
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVT---WTILMGWYA--RNSHFDEAFKLFRQM--- 136
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
R +C + PD + +LL GC N+ + +
Sbjct: 137 ------CRSSSCTL----------------------PDHVTFTTLLPGC----NDAVPQN 164
Query: 642 AVKNLWKLA 650
AV + A
Sbjct: 165 AVGQVHAFA 173
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 337/635 (53%), Gaps = 36/635 (5%)
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
I++ L + ++N +++A + A+R+FD +P+ N SW L+ + K G + E
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAE 196
FE+ P ++ ++W I G+ +G A+K + ++ VT ++ K +
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 197 INDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVI 256
LG + G + K GFE ++ V + L+ + +G + A+ VF ++ R+ V + +
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 257 LDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNT 316
+ + G + +A ++F M E++ VSW+ MI Q+G +EA FR+M K +
Sbjct: 212 MGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 317 SCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDS 376
F VL A L A+ G +HA +++ + +++ +ALID+Y KC
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK----------- 319
Query: 377 IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVF 436
+ AK +FD M ++N VSW+A++ GY + + +
Sbjct: 320 -----------------------CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F +M SG P+ T + A A+V+SLE+G HGK I G + V + +L Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTIL 556
K GDI+ S R+F+ M ++ +SWT MV A+ G A E+I LF++M + + P+ +T+
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
V+ ACS +GLV+KG +YF M Y I P+ HY+C++D+ SRSGRL EA FIN MPF
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
PD+ W +LLS C+ N +I + A ++L +L HPAGY LLS+IYAS G+W +
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R+ M EK ++K G SW++ + ++H F + +P
Sbjct: 597 RRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSP 631
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 246/506 (48%), Gaps = 35/506 (6%)
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
C N R + G I +A + N+++ M AR VFDR+ + ++
Sbjct: 13 CIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL 72
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
SW +L + + G + E F+++P+R+ V+W+V+I Y+ SG A + + M R
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR- 131
Query: 311 SFKPNTSCFSI--VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
F N + ++ +L +S + G +H V+K+G E + + + L+ +Y+ G
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
D + VF + +++ V +NS++GG G +E+A +LF M K + VSW+A+I G +
Sbjct: 192 DAKKVFYGLDDRN---TVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQ 247
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ F EM + G ++ F SVL A + ++ +GK +H II+ F +++
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
G+AL D Y K + ++ VFDRM KN +SWT MV G ++G A+E++ +F +M+++ I
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRL 604
P+ T+ + AC++ +++G ++ I HY V V + + G +
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKA-----ITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 605 SEAEDFINSMPFEPDSNAWASLLSGCKTYKNE----QIAERAVKNLWKLAEEHPAGYVLL 660
++ N M D+ +W +++S + Q+ ++ V++ K P G L
Sbjct: 423 DDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK-----PDGVTLT 476
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLR 686
I A + R + EKG R
Sbjct: 477 GVISACS---------RAGLVEKGQR 493
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/567 (24%), Positives = 249/567 (43%), Gaps = 110/567 (19%)
Query: 3 ASLRSLFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL 62
A++++ ++ + S N T + +LK +S V G+ +HG +IK G + + L
Sbjct: 121 AAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 63 LIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWT 122
L MY AN+ G + +A+++F G+ +RN V +
Sbjct: 181 LYMY-----------------------------ANV--GCISDAKKVFYGLDDRNTVMYN 209
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
+L+ G + G +E+++ F R ++ +SW A I G QNG + EA++ F ++ G+K
Sbjct: 210 SLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKM 268
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
++ F S+ AC + G + I + F+ H+ V ++LI + K + A++VF
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
DRM++++VVSWT M+ Y Q+G EEA +
Sbjct: 329 DRMKQKNVVSWT-------------------------------AMVVGYGQTGRAEEAVK 357
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+F M R P+ +SA A++ +L G H + G+ V +SN+L+ LY
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KCG+ D +F+ E +V VSW +M+ Y G+ E +LFD M
Sbjct: 418 KCGDIDDSTRLFN---EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM----------- 463
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKII-KLG 481
++H G P+ T + V+ A + +EKG+ + + G
Sbjct: 464 ----VQH----------------GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESG------YAK 534
+ + + D +++SG +E + R + MP + I WT ++ G +A
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563
Query: 535 ESINLFEEMEKTSITPNELTILSVLFA 561
ES+ +E P T+LS ++A
Sbjct: 564 ESL-----IELDPHHPAGYTLLSSIYA 585
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 331/605 (54%), Gaps = 67/605 (11%)
Query: 109 LFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
L G ERN V +L++ ++K+ RV+ + F+ ++VISW + I G+V NG + +
Sbjct: 222 LKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L +F+++L SG++ + T S+ CA+ LG +V + KA F + CN+L
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL--- 337
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
LD++ + GDL A+ +F EM +R+ VS++ MI
Sbjct: 338 ----------------------------LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 369
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
A Y + G EA +LF +M P+ + VL+ A + L G VH + + +
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
D+F+SNAL+D+Y+KC G M+EA+ +F
Sbjct: 430 FDIFVSNALMDMYAKC----------------------------------GSMQEAELVF 455
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASL 467
M ++ +SW+ II GY ++ + ++FN +L P++ T + VL A AS+++
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
+KG+++HG I++ G+ D + +L D YAK G + + +FD + K+ +SWTVM+ G
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
G+ KE+I LF +M + I +E++ +S+L+ACSHSGLVD+G ++FN M I+P
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HY C+VDML+R+G L +A FI +MP PD+ W +LL GC+ + + ++AE+ + ++
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 695
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
+L E+ YVL++NIYA A +W +RK + ++GLRK+ GCSW+E++ +V+ F
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Query: 708 DHNPK 712
NP+
Sbjct: 756 SSNPE 760
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 187/388 (48%), Gaps = 48/388 (12%)
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
++ GDL EA R+FDE+ + W++++ +SG + LF++M + ++
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
FS V + +SL+++ G +H +LK G + + N+L+ Y K R VFD +
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
E+D V+SWNS+I GY NG E+ +V
Sbjct: 258 ERD---VISWNSIINGYVSNGLAEKG-------------------------------LSV 283
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
F +ML+SG + +T SV A + G+ +H +K F + L D Y+K
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
GD++S++ VF M D++ +S+T M+ G A G A E++ LFEEME+ I+P+ T+ +V
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 559 LFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-----TCVVDMLSRSGRLSEAEDFINS 613
L C+ L+D+G + IK N + ++DM ++ G + EAE +
Sbjct: 404 LNCCARYRLLDEGKRVHEW------IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 614 MPFEPDSNAWASLLSGC--KTYKNEQIA 639
M + D +W +++ G Y NE ++
Sbjct: 458 MRVK-DIISWNTIIGGYSKNCYANEALS 484
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 171/375 (45%), Gaps = 41/375 (10%)
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMH 337
+R+ + + R+ +SG E A +L ++ P T C VL A K+L+ G
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCS--VLQLCADSKSLKDGKE 115
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
V + G D + + L +Y+ CG+ K+ VFD E + + WN
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD---EVKIEKALFWNI------- 165
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
L + + K D S S +F +M+ SG + TFS V
Sbjct: 166 ---------LMNELAKSGDFSGS---------------IGLFKKMMSSGVEMDSYTFSCV 201
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
+ +S+ S+ G+ LHG I+K GF +G +L Y K+ ++S+R+VFD M +++
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 518 ISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNS 577
ISW ++ G +G A++ +++F +M + I + TI+SV C+ S L+ G + +S
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-RAVHS 320
Query: 578 MEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQ 637
+ R ++DM S+ G L A+ M + ++ S+++G Y E
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAG---YAREG 376
Query: 638 IAERAVKNLWKLAEE 652
+A AVK ++ EE
Sbjct: 377 LAGEAVKLFEEMEEE 391
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 46/284 (16%)
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GFD+ V N +++ + G+++EA+ +F M ++ +SW +I G+ K
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK------------- 475
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKPNEVTFSSICKACAEINDFRL 202
N ++ EAL LF LLE P+E T + + ACA ++ F
Sbjct: 476 ------------------NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 203 GLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIE 262
G + G I + G+ V NSL+ + K G + LA +FD + +D+VSWTV++ +
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 263 MGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK--PNT 316
G EA +F++M E +E+S+ ++ + SG +E +R F M R+ K P
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM-RHECKIEPTV 636
Query: 317 SCFSIVLSALASLKALRSGMHVHAH--VLKIGIEKDVFISNALI 358
++ ++ LA R+G + A+ + + I D I AL+
Sbjct: 637 EHYACIVDMLA-----RTGDLIKAYRFIENMPIPPDATIWGALL 675
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 127/324 (39%), Gaps = 80/324 (24%)
Query: 7 SLFSIN-PETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIM 65
SLF++ E F+ T C+L S + +GR +HG++++ G +R++ L+ M
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + G L A LFD + ++ VSWT +I
Sbjct: 544 Y-------------------------------AKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
+G+ H GF EA+ LF ++ ++G++ +E+
Sbjct: 573 AGYGMH-------------------------------GFGKEAIALFNQMRQAGIEADEI 601
Query: 186 TFSSICKACAEINDFRLGLSVFGLI-FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
+F S+ AC+ G F ++ + E V ++ + + G++ A +
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 245 ME-KRDVVSWTVIL-------DVFIEMGDLGE--ARRIFDEMPERNEVSWSVMIARYNQS 294
M D W +L DV L E A ++F+ PE N + +M Y ++
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDV-----KLAEKVAEKVFELEPE-NTGYYVLMANIYAEA 715
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSC 318
E+ RL +++ + + N C
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGC 739
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 310/539 (57%), Gaps = 5/539 (0%)
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK-HVSVCNSL 225
+A+ L + G++ +S+ + C + + G + + GF++ + + N L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
I + +K G+ A VFD+M R++ SW ++ +++ G L AR +FD MPER+ VSW+
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI 345
M+ Y Q G EA +++ R K N F+ +L+A + L+ H VL
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 346 GIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAK 405
G +V +S ++ID Y+KCG+ + + FD + KD+ H+ W ++I GY G ME A+
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI-HI--WTTLISGYAKLGDMEAAE 265
Query: 406 ELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVA 465
+LF MP++N VSW+A+I+GY+ + +F +M+ G P + TFSS LCASAS+A
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 466 SLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMV 524
SL GK++HG +I+ + + ++L D Y+KSG +E+S RVF DK++ + W M+
Sbjct: 326 SLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMI 385
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
LA+ G +++ + ++M K + PN T++ +L ACSHSGLV++GL++F SM + I
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
P+ HY C++D+L R+G E I MPFEPD + W ++L C+ + NE++ ++A
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
L KL E A Y+LLS+IYA G+W +R +M ++ + K SW+E+ +V F
Sbjct: 506 ELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAF 564
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 226/461 (49%), Gaps = 16/461 (3%)
Query: 63 LIMYLGSRKSLEANEIVK---DLNGF---DLVVHNCMINANIQWGNLEEAQRLFDGMPER 116
L+ G KSL+ + + + GF + ++ N +I ++ G +A ++FD M R
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 117 NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL 176
N SW ++SG++K G + + F+ P ++V+SW + G+ Q+G EAL + +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 177 ESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVD 236
SG+K NE +F+ + AC + +L G + AGF +V + S+I K G+++
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
A+ FD M +D+ WT ++ + ++GD+ A ++F EMPE+N VSW+ +IA Y + G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNA 356
A LFR+M KP FS L A AS+ +LR G +H ++++ + + + ++
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 357 LIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK--- 413
LID+YSK G + VF + D V WN+MI +G +A + D+M K
Sbjct: 352 LIDMYSKSGSLEASERVFR--ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 414 -RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGK 471
N + I++ + F M + G +P++ ++ ++ K
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF---K 466
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
+L KI ++ F D + A+ G+ E ++ D +
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL 507
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/599 (33%), Positives = 335/599 (55%), Gaps = 15/599 (2%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPN 183
LI+ + + ++ + P + S+++ I + +++ +F ++ G+ P+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 184 EVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
++ K CAE++ F++G + + +G + V S+ + ++ G + AR VFD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 244 RMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEE 299
RM +DVV+ + +L + G L E RI EM E N VSW+ +++ +N+SGY +E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 300 AFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
A +F+++ F P+ S VL ++ + L G +H +V+K G+ KD + +A+ID
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 360 LYSKCGETKDGRLVFDS--IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR--- 414
+Y K G +F+ ++E V N+ I G NG +++A E+F+ ++
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVC-----NAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 415 -NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
N VSW++II+G ++ + +F EM ++G PN T S+L A ++A+L G+
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
HG +++ +V +G+AL D YAK G I S+ VF+ MP KN + W ++ G + G A
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
KE +++FE + +T + P+ ++ S+L AC GL D+G KYF M Y IKP HY+C
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEH 653
+V++L R+G+L EA D I MPFEPDS W +LL+ C+ N +AE A + L+ L E+
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 654 PAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
P YVLLSNIYA+ G W + ++R M GL+K+ GCSW++V+N+V+ +P+
Sbjct: 591 PGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/546 (23%), Positives = 260/546 (47%), Gaps = 28/546 (5%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRL--LIMYLGSRKSLEANEIVKDLNG 84
L+ +T L Q + + G+ + ++ L + L + K + V ++G
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 85 FDL--VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYF- 141
D+ V M + ++ G + +A+++FD M +++ V+ +AL+ + + G +EE +
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 142 --ERNPFQ-NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
E + + N++SW + GF ++G+ EA+ +F K+ G P++VT SS+ + +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
+G + G + K G K V +++I + K G V S+F++ E + +
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 259 VFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
G + +A +F+ E+ N VSW+ +IA Q+G EA LFR+M KP
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N +L A ++ AL G H +++ + +V + +ALID+Y+KCG ++VF
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHK 430
+ + K+ +V WNS++ G+ ++G+ +E +F+++ K + +S+++++S +
Sbjct: 447 NMMPTKN---LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 431 QFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
D + F M G P +S ++ L++ DL I ++ F D +
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL---IKEMPFEPDSCVW 560
Query: 490 TALTDTYAKSGDIE----SSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
AL ++ +++ ++ ++F P+ N ++ ++ A G E ++ +ME
Sbjct: 561 GALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAKGMWTEVDSIRNKMES 619
Query: 546 TSITPN 551
+ N
Sbjct: 620 LGLKKN 625
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
+ALI + K GR+ S F P +N++ W + + GF +G + E + +F L+ + +K
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKA-GFEKHVSVCNSLITLSLKMGEVDLARS 240
P+ ++F+S+ AC ++ G F ++ + G + + + ++ L + G++ A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 241 VFDRME-KRDVVSWTVILDV--FIEMGDLGE--ARRIFDEMPERNEVSWSVMIARYNQSG 295
+ M + D W +L+ DL E A ++F PE N ++ ++ Y G
Sbjct: 547 LIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAKG 605
Query: 296 YPEEAFRLFRQMTRYSFKPNTSC 318
E + +M K N C
Sbjct: 606 MWTEVDSIRNKMESLGLKKNPGC 628
Score = 39.7 bits (91), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K H +I+K G D ++ L +Y+ + V +PD S++ ++ L
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
++ +SI +F M + P+ + ++ C+ G K + + + + +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG-KQIHCVSCVSGLDMDA 151
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSM 614
+ M R GR+ +A + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRM 177
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 359 bits (921), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 310/544 (56%), Gaps = 35/544 (6%)
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L+ ++LL KP T+ ++ + C++ G V I +GF + + N L+ +
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K G + AR VFD M RD+ SW V+++ + E+G L EAR++FDEM E++ SW+ M+
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 289 ARYNQSGYPEEAFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI 347
Y + PEEA L+ M R + +PN SI ++A A++K +R G +H H+++ G+
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 348 EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKEL 407
+ D V W+S++ YG G ++EA+ +
Sbjct: 250 DSDE----------------------------------VLWSSLMDMYGKCGCIDEARNI 275
Query: 408 FDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASL 467
FD + +++ VSW+++I Y + ++ F++F+E++ S E PN+ TF+ VL A A + +
Sbjct: 276 FDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTE 335
Query: 468 EKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
E GK +HG + ++GF F ++L D Y K G+IES++ V D P + +SWT ++ G
Sbjct: 336 ELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGC 395
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
A++G E++ F+ + K+ P+ +T ++VL AC+H+GLV+KGL++F S+ + +
Sbjct: 396 AQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
HYTC+VD+L+RSGR + + I+ MP +P WAS+L GC TY N +AE A + L+
Sbjct: 456 SDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 515
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKT 707
K+ E+P YV ++NIYA+AG+W + +RK M E G+ K G SW E++ + H F
Sbjct: 516 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAAD 575
Query: 708 DHNP 711
+P
Sbjct: 576 TSHP 579
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 158/575 (27%), Positives = 255/575 (44%), Gaps = 109/575 (18%)
Query: 26 CLLKDITSQNLVIQ-GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
C L + SQ ++ G+ +H H+ +G + RLL MY ++A ++ ++
Sbjct: 89 CNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN 148
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
DL N M+N + G LEEA++LFD M E++ SWTA+++G++K + EE++ +
Sbjct: 149 RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS-- 206
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGL 204
L ++ S +PN T S A A + R G
Sbjct: 207 --------------------------LMQRVPNS--RPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
+ G I +AG + + +SL+ + K G +D AR++FD++ ++DVVSWT ++D
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID------ 292
Query: 265 DLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLS 324
RY +S E F LF ++ +PN F+ VL+
Sbjct: 293 -------------------------RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLN 327
Query: 325 ALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH 384
A A L G VH ++ ++G + F S++L+D+Y+KCG + + V D + D
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD--- 384
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+VSW S+IGG NGQ +EA K FDL +L
Sbjct: 385 LVSWTSLIGGCAQNGQPDEAL------------------------KYFDL-------LLK 413
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKII---KLGFPYDVFLGTALTDTYAKSGD 501
SG P+ TF +VL A +EKG + I +L D + T L D A+SG
Sbjct: 414 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY--TCLVDLLARSGR 471
Query: 502 IESSRRVFDRMPDK-NEISWTVMVRGLAESGYAKESINLFEE--MEKTSITP-NELTILS 557
E + V MP K ++ W ++ G + G +I+L EE E I P N +T ++
Sbjct: 472 FEQLKSVISEMPMKPSKFLWASVLGGCSTYG----NIDLAEEAAQELFKIEPENPVTYVT 527
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
+ + +G ++ K M+ I K G +T
Sbjct: 528 MANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWT 562
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 358 bits (920), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 213/694 (30%), Positives = 346/694 (49%), Gaps = 104/694 (14%)
Query: 19 SYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI 78
S IE C+ L Q + HGH+I+TG + Y ++L M S
Sbjct: 35 SLIERCVSLR----------QLKQTHGHMIRTGTFSDPYSASKLFAMAALS--------- 75
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
+ +LE A+++FD +P+ N +W LI + S+
Sbjct: 76 --------------------SFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSI 115
Query: 139 WYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEIN 198
W F +++S ES PN+ TF + KA AE++
Sbjct: 116 W-----AFLDMVS-------------------------ESQCYPNKYTFPFLIKAAAEVS 145
Query: 199 DFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILD 258
LG S+ G+ K+ V V NSLI
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLI-------------------------------H 174
Query: 259 VFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSC 318
+ GDL A ++F + E++ VSW+ MI + Q G P++A LF++M K +
Sbjct: 175 CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVT 234
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
VLSA A ++ L G V +++ + + ++ ++NA++D+Y+KCG +D + +FD++
Sbjct: 235 MVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME 294
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
EKD V+W +M+ GY ++ E A+E+ ++MP+++ V+W+A+IS Y ++ + + V
Sbjct: 295 EKDN---VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 439 FNEMLLSGEIP-NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYA 497
F+E+ L + N+ T S L A A V +LE G+ +H I K G + + +AL Y+
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYS 411
Query: 498 KSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILS 557
K GD+E SR VF+ + ++ W+ M+ GLA G E++++F +M++ ++ PN +T +
Sbjct: 412 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471
Query: 558 VLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE 617
V ACSH+GLVD+ F+ ME Y I P +HY C+VD+L RSG L +A FI +MP
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531
Query: 618 PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVR 677
P ++ W +LL CK + N +AE A L +L + +VLLSNIYA G+W + +R
Sbjct: 532 PSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELR 591
Query: 678 KLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
K M GL+K GCS +E+ +H F + +P
Sbjct: 592 KHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 202/670 (30%), Positives = 362/670 (54%), Gaps = 8/670 (1%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTG-IHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
LL+ +S+N R +G L+K G + + LL MY S K A + ++
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+ N MI + G + R FD MPER+ SW ++SGF K G + + F P
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
++V++ + + G++ NG++ EAL+LF +L + +T +++ KACAE+ + G
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQ 208
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ I G E + +SL+ + K G++ +A + +++ + D S + ++ + G
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+ E+R +FD R + W+ MI+ Y + EA LF +M R + ++ + V++A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINA 327
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
L L +G +H H K G+ D+ +++ L+D+YSKCG + +F + D
Sbjct: 328 CIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT--- 384
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
+ NSMI Y G++++AK +F+ + ++ +SW+++ +G+ ++ F++M
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
++ + SSV+ A AS++SLE G+ + + +G D + ++L D Y K G +E
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHG 504
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
RRVFD M +E+ W M+ G A +G E+I+LF++M I P ++T + VL AC++
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYC 564
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
GLV++G K F SM+ + P+ H++C+VD+L+R+G + EA + + MPF+ D + W+S
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
+L GC + + ++A + + +L E+ YV LS I+A++G W + VRKLM E +
Sbjct: 625 ILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNV 684
Query: 686 RKSGGCSWVE 695
K+ G SW +
Sbjct: 685 TKNPGSSWTD 694
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/567 (35%), Positives = 308/567 (54%), Gaps = 36/567 (6%)
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
N++ W G + ALKL++ ++ G+ PN TF + K+CA+ F+ G +
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
G + K G + + V SLI++ ++ G ++ A VFD+ RDVVS+T ++ + G +
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
A+++FDE+P ++ VSW+ MI+ Y ++G +EA LF+ M + + +P+ S V+SA A
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
++ G VH + G ++ I NALIDLYSKCGE
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE--------------------- 316
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+E A LF+ +P ++ +SW+ +I GY + +F EML SGE
Sbjct: 317 -------------LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKL--GFPYDVFLGTALTDTYAKSGDIESS 505
PN T S+L A A + +++ G+ +H I K G L T+L D YAK GDIE++
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+VF+ + K+ SW M+ G A G A S +LF M K I P+++T + +L ACSHS
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 566 GLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWAS 625
G++D G F +M Y + P HY C++D+L SG EAE+ IN M EPD W S
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 543
Query: 626 LLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGL 685
LL CK + N ++ E +NL K+ E+P YVLLSNIYASAGRW + R L+ +KG+
Sbjct: 544 LLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM 603
Query: 686 RKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+K GCS +E+ + VH F +P+
Sbjct: 604 KKVPGCSSIEIDSVVHEFIIGDKFHPR 630
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 201/365 (55%), Gaps = 5/365 (1%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
L A +F + E N + W+ M + S P A +L+ M PN+ F VL +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A KA + G +H HVLK+G + D+++ +LI +Y + G +D VFD +D V
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD---V 200
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
VS+ ++I GY G +E A++LFD +P ++ VSW+A+ISGY E + +F +M+ +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESS 505
P++ST +V+ A A S+E G+ +H I GF ++ + AL D Y+K G++E++
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 506 RRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHS 565
+F+R+P K+ ISW ++ G KE++ LF+EM ++ TPN++T+LS+L AC+H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 566 GLVDKGLKYFNSMEP-IYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
G +D G ++ + + T ++DM ++ G + A NS+ ++W
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWN 439
Query: 625 SLLSG 629
+++ G
Sbjct: 440 AMIFG 444
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 204/431 (47%), Gaps = 73/431 (16%)
Query: 18 NSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANE 77
NSY T +LK +G+ +HGH++K G
Sbjct: 133 NSY--TFPFVLKSCAKSKAFKEGQQIHGHVLKLGC------------------------- 165
Query: 78 IVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEES 137
DL VH +I+ +Q G LE+A ++FD P R+ VS+TALI G+ G +E +
Sbjct: 166 ------DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 138 MWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEI 197
F+ P ++V+SW A I G+ + G EAL+LF ++++ V+P+E T ++ ACA+
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 198 NDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVIL 257
LG V I GF ++ + N+LI L K GE++ A +F+R+ +DV+SW ++
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 258 DVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTS 317
+ M +EA LF++M R PN
Sbjct: 340 GGYTHM-------------------------------NLYKEALLLFQEMLRSGETPNDV 368
Query: 318 CFSIVLSALASLKALRSGMHVHAHVLK--IGIEKDVFISNALIDLYSKCGETKDGRLVFD 375
+L A A L A+ G +H ++ K G+ + +LID+Y+KCG+ + VF+
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 376 SIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK----RNDVSWSAIISGYLEHKQ 431
SI+ K ++ SWN+MI G+ ++G+ + + +LF M K +D+++ ++S
Sbjct: 429 SILHKSLS---SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 432 FDLVFAVFNEM 442
DL +F M
Sbjct: 486 LDLGRHIFRTM 496
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 193/429 (44%), Gaps = 90/429 (20%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID--LYSKCGETKDGRL-VFDSIVE 379
LS L + K L+S +HA ++KIG+ + + LI+ + S E + VF +I E
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ ++ WN+M G+ L+ A +L+
Sbjct: 97 PN---LLIWNTMFRGHALSSDPVSALKLYVC----------------------------- 124
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG---------- 489
M+ G +PN TF VL + A + ++G+ +HG ++KLG D+++
Sbjct: 125 --MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQN 182
Query: 490 ---------------------TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
TAL YA G IE+++++FD +P K+ +SW M+ G A
Sbjct: 183 GRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYA 242
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNG 588
E+G KE++ LF++M KT++ P+E T+++V+ AC+ SG ++ G + ++ + N
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD-HGFGSNL 301
Query: 589 RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWK 648
+ ++D+ S+ G L A +P++ D +W +L+ G Y + + + A+ +
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG---YTHMNLYKEALLLFQE 357
Query: 649 L--AEEHPAGYVLLSNIYASA-------GRWIDAM---NVRKLMTEKGLRKS-----GGC 691
+ + E P +LS + A A GRWI ++ + LR S C
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 692 SWVEVRNQV 700
+E +QV
Sbjct: 418 GDIEAAHQV 426
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 218/741 (29%), Positives = 360/741 (48%), Gaps = 123/741 (16%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
+F+S + C K I S + G LHG ++K G + Y+ L+ +Y + A
Sbjct: 290 AFSSVLSAC----KKIESLEI---GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF-----DGM-PERNEVS--------- 120
I +++ D V +N +IN Q G E+A LF DG+ P+ N ++
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 121 -----------WT-------------ALISGFMKHGRVEESMWYFERNPFQNVISWTAAI 156
+T AL++ + K +E ++ YF +NV+ W +
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 157 CGF-----VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIF 211
+ ++N F ++F ++ + PN+ T+ SI K C + D LG + I
Sbjct: 463 VAYGLLDDLRNSF-----RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 212 KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARR 271
K F+ + VC+ LI + K+G++D +W +++
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLD--------------TAWDILI-------------- 549
Query: 272 IFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA 331
++ VSW+ MIA Y Q + ++A FRQM + + + +SA A L+A
Sbjct: 550 ---RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 332 LRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSM 391
L+ G +HA G D+ NAL+ LYS+CG
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG-------------------------- 640
Query: 392 IGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNK 451
++EE+ F+ ++++W+A++SG+ + + VF M G N
Sbjct: 641 --------KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Query: 452 STFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR 511
TF S + A++ A++++GK +H I K G+ + + AL YAK G I + + F
Sbjct: 693 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Query: 512 MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKG 571
+ KNE+SW ++ ++ G+ E+++ F++M +++ PN +T++ VL ACSH GLVDKG
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
+ YF SM Y + P HY CVVDML+R+G LS A++FI MP +PD+ W +LLS C
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV-RKLMTEKGLRKSGG 690
+KN +I E A +L +L E A YVLLSN+YA + +W DA ++ R+ M EKG++K G
Sbjct: 873 VHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW-DARDLTRQKMKEKGVKKEPG 931
Query: 691 CSWVEVRNQVHFFFQKTDHNP 711
SW+EV+N +H F+ ++P
Sbjct: 932 QSWIEVKNSIHSFYVGDQNHP 952
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 158/648 (24%), Positives = 283/648 (43%), Gaps = 117/648 (18%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYL------GSRKSLEA---------NEIVKDLN 83
+GR LH ++K G+ L+ +L YL G+ K + N+++K+L
Sbjct: 103 EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 162
Query: 84 GFDL-----------VVHNCMINANIQWGNLE---------------EAQRLFDGMPERN 117
+L V N N G LE A+ L+ G+ +
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 118 EVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
V LI + ++G V+ + F+ ++ SW A I G +N EA++LF +
Sbjct: 223 VVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV 281
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDL 237
G+ P FSS+ AC +I +G + GL+ K GF VCN+L++L +G +
Sbjct: 282 LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 238 ARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYP 297
A +F M +RD V+++ +I +Q GY
Sbjct: 342 AEHIFSNMSQRDA-------------------------------VTYNTLINGLSQCGYG 370
Query: 298 EEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNAL 357
E+A LF++M +P+++ + ++ A ++ L G +HA+ K+G + I AL
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 358 IDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV 417
++LY+KC D D +E +V +VV WN M+ YG L D++ RN
Sbjct: 431 LNLYAKCA---DIETALDYFLETEVENVVLWNVMLVAYG----------LLDDL--RNS- 474
Query: 418 SWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI 477
F +F +M + +PN+ T+ S+L + LE G+ +H +I
Sbjct: 475 ------------------FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 478 IKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESI 537
IK F + ++ + L D YAK G ++++ + R K+ +SWT M+ G + + +++
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 538 NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDM 597
F +M I +E+ + + + AC+ + +G + ++ + + +V +
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTL 635
Query: 598 LSRSGRLSEAEDFINSMPFEP----DSNAWASLLSGCKTYKNEQIAER 641
SR G++ E+ + FE D+ AW +L+SG + N + A R
Sbjct: 636 YSRCGKIEES-----YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 151/354 (42%), Gaps = 71/354 (20%)
Query: 313 KPNTSCFSIVLSA-LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+PN +L L + +L G +H+ +LK+G++ + +S L D Y G+
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VFD + E+ + +WN MI KEL RN +
Sbjct: 141 KVFDEMPERT---IFTWNKMI------------KEL----ASRNLIGE------------ 169
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLG 489
VF +F M+ PN+ TFS VL C SVA + + +H +I+ G +
Sbjct: 170 ---VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA-FDVVEQIHARILYQGLRDSTVVC 225
Query: 490 TALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSIT 549
L D Y+++G ++ +RRVFD + K+ SW M+ GL+++ E+I LF +M I
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 550 PNELTILSVLFACSH----------SGLVDK-GLK------------YFN-----SMEPI 581
P SVL AC GLV K G YF+ S E I
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 582 YN--IKPNGRHYTCVVDMLSRSGRLSEAEDFINSM---PFEPDSNAWASLLSGC 630
++ + + Y +++ LS+ G +A + M EPDSN ASL+ C
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 449 PNKSTFSSVL--CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
PN T +L C + SL++G+ LH +I+KLG + L L D Y GD+ +
Sbjct: 82 PNHQTLKWLLEGCLKTN-GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VFD MP++ +W M++ LA E LF M ++TPNE T VL AC
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 567 LVDKGLKYFNSMEPIY-NIKPNGRHYTCVV-----DMLSRSGRLSEAEDFINSMPFEPDS 620
+ F+ +E I+ I G + VV D+ SR+G + A + + + D
Sbjct: 201 VA------FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DH 253
Query: 621 NAWASLLSGCKTYKNEQIAE 640
++W +++SG KNE AE
Sbjct: 254 SSWVAMISGLS--KNECEAE 271
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 352 bits (902), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 347/644 (53%), Gaps = 36/644 (5%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N I+ + + GNL+EA+ +F M R+ VSW A+IS + ++G++ ++ F+ P +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 151 SWTAAICGFVQNGFSF-EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGL 209
S+ A I ++N +A +LF + E N V+++++ F ++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 210 IFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEA 269
F V+ N L++ L+ G+ + A VF M ++VVS + ++ + +MG + +A
Sbjct: 170 T-PVKFRDSVA-SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALAS 328
R +FD M ERN ++W+ MI Y ++G+ E+ F LF +M + K N++ +++ A
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAH---- 384
R G +H V ++ +E D+F+ N+L+ +YSK G + + VF + KD
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 385 ------------------------VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
+VSW MI G+ G++ + ELF MP++++++W+
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWT 407
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
A+IS ++ + ++ F++ML PN TFSSVL A+AS+A L +G +HG+++K+
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
D+ + +L Y K G+ + ++F + + N +S+ M+ G + +G+ K+++ LF
Sbjct: 468 NIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF 527
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+E + PN +T L++L AC H G VD G KYF SM+ YNI+P HY C+VD+L R
Sbjct: 528 SMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGR 587
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
SG L +A + I++MP +P S W SLLS KT+ +AE A K L +L + YV+L
Sbjct: 588 SGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVL 647
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
S +Y+ G+ D + + K ++K G SW+ ++ +VH F
Sbjct: 648 SQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFL 691
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 207/417 (49%), Gaps = 70/417 (16%)
Query: 62 LLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSW 121
LL YL + K EA + + + ++V + M++ + G + +A+ LFD M ERN ++W
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-V 180
TA+I G+ K GF ++GF LFL++ + G V
Sbjct: 243 TAMIDGYFK--------------------------AGFFEDGFG-----LFLRMRQEGDV 271
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
K N T + + KAC + +R G + GL+ + E + + NSL+++ K+G + A++
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 241 V-------------------------------FDRMEKRDVVSWTVILDVFIEMGDLGEA 269
V F++M +D+VSWT ++ F G++ +
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 270 RRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASL 329
+F MPE++ ++W+ MI+ + +GY EEA F +M + PN+ FS VLSA ASL
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
L G+ +H V+K+ I D+ + N+L+ +Y KCG T D +F I E + +VS+N
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN---IVSYN 508
Query: 390 SMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
+MI GY NG ++A +LF + + N V++ A++S + DL + F M
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 210/435 (48%), Gaps = 33/435 (7%)
Query: 222 CNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNE 281
CNS I+ + G + A ++F +M R +VSW ++ + E G + +A ++FDEMP R
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 282 VSWSVMI-ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHA 340
S++ MI A +A+ LF + + N ++ +++ +R+G A
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGF-----VRAGRFDEA 163
Query: 341 HVLKIGIE---KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
L +D SN L+ Y + G+ + VF + K+ VVS +SM+ GY
Sbjct: 164 EFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE---VVSCSSMVHGYCK 220
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIP-NKSTFSS 456
G++ +A+ LFD M +RN ++W+A+I GY + F+ F +F M G++ N +T +
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 457 VLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKN 516
+ A +G +HG + ++ +D+FLG +L Y+K G + ++ VF M +K+
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 517 EISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW ++ GL + E+ LFE+M + ++ ++ S G + K ++ F
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFG 396
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---PDSNAWASLLSGCKTY 633
M NI +T ++ +G EA + + M + P+S ++S+LS +
Sbjct: 397 MMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 634 KN----EQIAERAVK 644
+ QI R VK
Sbjct: 452 ADLIEGLQIHGRVVK 466
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 173/397 (43%), Gaps = 65/397 (16%)
Query: 39 QGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANI 98
+G +HG + + + + +L L+ MY EA + + D V N +I +
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 99 QWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
Q + EA LF+ MP ++ VSWT +I GF G + + + F P ++ I+WTA I
Sbjct: 353 QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISA 412
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKH 218
FV NG+ EAL F K+L+ V PN TFSS+ A A + D GL + G + K
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 219 VSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
+SV NSL+++ K G + +A +IF + E
Sbjct: 473 LSVQNSLVSMYCKCGNTN-------------------------------DAYKIFSCISE 501
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
N VS++ MI+ Y+ +G+ ++A +LF + +PN F +LSA V
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC-----------V 550
Query: 339 HAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLN 398
H + +G + Y K ++ +E H + M+ G +
Sbjct: 551 HVGYVDLGWK------------YFKSMKSSYN-------IEPGPDH---YACMVDLLGRS 588
Query: 399 GQMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDL 434
G +++A L MP K + W +++S H + DL
Sbjct: 589 GLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME- 544
+F + +A++G+++ + +F +M +++ +SW M+ AE+G ++ +F+EM
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 545 KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRL 604
+ + + N + + C + K + F + + N Y ++ R+GR
Sbjct: 110 RVTTSYNAMITAMIKNKCD----LGKAYELFCDIP-----EKNAVSYATMITGFVRAGRF 160
Query: 605 SEAEDFINSMPFE-PDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNI 663
EAE P + DS A LLSG Y AV+ +A + + +
Sbjct: 161 DEAEFLYAETPVKFRDSVASNVLLSG---YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHG 217
Query: 664 YASAGRWIDAMNVRKLMTEKGL 685
Y GR +DA ++ MTE+ +
Sbjct: 218 YCKMGRIVDARSLFDRMTERNV 239
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 72/197 (36%), Gaps = 64/197 (32%)
Query: 11 INPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSR 70
+ E NSY T +L S +I+G +HG ++K I
Sbjct: 430 LQKEVCPNSY--TFSSVLSATASLADLIEGLQIHGRVVKMNIVN---------------- 471
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
DL V N +++ + GN +A ++F + E N VS+ +ISG
Sbjct: 472 ---------------DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG--- 513
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
+ NGF +ALKLF L SG +PN VTF ++
Sbjct: 514 ----------------------------YSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Query: 191 CKACAEINDFRLGLSVF 207
AC + LG F
Sbjct: 546 LSACVHVGYVDLGWKYF 562
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 215/739 (29%), Positives = 366/739 (49%), Gaps = 106/739 (14%)
Query: 15 TSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLE 74
+SF + T + L+ +S + QGR +H H++ + + L +L MY +
Sbjct: 61 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 75 ANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLF------DGMPER------------ 116
A E+ + +LV + +I Q G EA RL+ D +P++
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 117 ---------------------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
+ ++ ALI+ +++ ++ ++ F P +++ISW++
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 156 ICGFVQNGFSFEALKLFLKLLESGV-KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAG 214
I GF Q GF FEAL ++L GV PNE F S KAC+ + G + GL K+
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS- 299
Query: 215 FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFD 274
+LA + ++ + D++ G L ARR+FD
Sbjct: 300 ---------------------ELAG---------NAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
++ + SW+V+IA +GY +EA +F QM F P+ +L A AL
Sbjct: 330 QIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ 389
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
GM +H++++K G D+ + N+L+ +Y+ C D F+
Sbjct: 390 GMQIHSYIIKWGFLADLTVCNSLLTMYTFCS---DLYCCFN------------------- 427
Query: 395 YGLNGQMEEAKELFDNMPKRND-VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
LF++ D VSW+ I++ L+H+Q + +F ML+S P+ T
Sbjct: 428 ------------LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 454 FSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP 513
++L ++SL+ G +H +K G + F+ L D YAK G + +RR+FD M
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 514 DKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
+++ +SW+ ++ G A+SG+ +E++ LF+EM+ I PN +T + VL ACSH GLV++GLK
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
+ +M+ + I P H +CVVD+L+R+GRL+EAE FI+ M EPD W +LLS CKT
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 655
Query: 634 KNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSW 693
N +A++A +N+ K+ + +VLL +++AS+G W +A +R M + ++K G SW
Sbjct: 656 GNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSW 715
Query: 694 VEVRNQVHFFFQKTDHNPK 712
+E+ +++H FF + +P+
Sbjct: 716 IEIEDKIHIFFAEDIFHPE 734
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 225/487 (46%), Gaps = 80/487 (16%)
Query: 178 SGVKPNEVT---FSSICKACAEINDFRLGLSVFGLI-----FKAGFEKHVS-VCNSLITL 228
S +K E+ +S+CK+ N +R L F FK ++S +C +
Sbjct: 26 STIKTEELMNDHINSLCKS----NFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSR 81
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
SL G + + + K D + IL ++ + G L +AR +FD MPERN VS++ +I
Sbjct: 82 SLAQGR-KIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVI 140
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIE 348
Y+Q+G EA RL+ +M + P+ F ++ A AS + G +HA V+K+
Sbjct: 141 TGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS 200
Query: 349 KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELF 408
+ NALI +Y + + D VF I KD ++SW+S+I G+ G EA
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD---LISWSSIIAGFSQLGFEFEA---- 253
Query: 409 DNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE 468
L H + L F VF+ PN+ F S L A +S+ +
Sbjct: 254 ------------------LSHLKEMLSFGVFH--------PNEYIFGSSLKACSSLLRPD 287
Query: 469 KGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
G +HG IK + G +L D YA+ G + S+RRVFD++ + SW V++ GLA
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 529 ESGYAKESINLFEEMEKTSITPNELTILSVLFACS-----------HSGLVDKG----LK 573
+GYA E++++F +M + P+ +++ S+L A + HS ++ G L
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 574 YFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTY 633
NS+ +Y + C ++ EDF N+ DS +W ++L+ C
Sbjct: 408 VCNSLLTMYTFCSD---LYCCFNLF---------EDFRNN----ADSVSWNTILTAC--L 449
Query: 634 KNEQIAE 640
++EQ E
Sbjct: 450 QHEQPVE 456
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 325/643 (50%), Gaps = 53/643 (8%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERN 144
F V C ++++ G A L G N AL++ + + + ++ F+
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFIS-NVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 145 PFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFRLG 203
+V+SW + I + + G AL++F ++ E G +P+ +T ++ CA + LG
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
+ + +++ V N L+ + K G +D A +VF M +DVVSW ++ + ++
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 264 GDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCF 319
G +A R+F++M E + V+WS I+ Y Q G EA + RQM KPN
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIE-------KDVFISNALIDLYSKCGETKDGRL 372
VLS AS+ AL G +H + +K I+ + + N LID+Y+KC
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK------- 421
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM-PKRNDV-SWSAIISGYLEHK 430
+++ A+ +FD++ PK DV +W+ +I GY +H
Sbjct: 422 ---------------------------KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 431 QFDLVFAVFNEMLLSG--EIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVF 487
+ + +EM PN T S L A AS+A+L GK +H ++ +F
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 488 LGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS 547
+ L D YAK G I +R VFD M KNE++WT ++ G GY +E++ +F+EM +
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 548 ITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
+ +T+L VL+ACSHSG++D+G++YFN M+ ++ + P HY C+VD+L R+GRL+ A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 608 EDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASA 667
I MP EP W + LS C+ + ++ E A + + +LA H Y LLSN+YA+A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 668 GRWIDAMNVRKLMTEKGLRKSGGCSWVE-VRNQVHFFFQKTDH 709
GRW D +R LM KG++K GCSWVE ++ FF H
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTH 737
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 247/533 (46%), Gaps = 71/533 (13%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQN--VISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
LIS ++ G + ++ R P + V W + I + NG + + L LF +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ TF + KAC EI+ R G S L GF +V V N+L+ + + + AR V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M DVVSW I++ + ++G P+ A
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGK-------------------------------PKVAL 213
Query: 302 RLFRQMT-RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
+F +MT + +P+ VL ASL G +H + + +++F+ N L+D+
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRND 416
Y+KCG + VF ++ KD VVSWN+M+ GY G+ E+A LF+ M K +
Sbjct: 274 YAKCGMMDEANTVFSNMSVKD---VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 417 VSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGK 476
V+WSA ISGY + V +ML SG PN+ T SVL ASV +L GK++H
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 477 IIKLGFPYDV---------FLGTALTDTYAKSGDIESSRRVFDRMPDKNE--ISWTVMVR 525
IK +P D+ + L D YAK ++++R +FD + K ++WTVM+
Sbjct: 391 AIK--YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 526 GLAESGYAKESINLFEEM--EKTSITPNELTILSVLFACSHSGLVDKG-------LKYFN 576
G ++ G A +++ L EM E PN TI L AC+ + G L+
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
+ P++ C++DM ++ G +S+A ++M + W SL++G
Sbjct: 509 NAVPLFV-------SNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTG 553
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 231/547 (42%), Gaps = 127/547 (23%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ LH + + + + ++ L+ MY EAN + +++ D+V N M+ Q
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAA 155
G E+A RLF+ M E + V+W+A IS
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS----------------------------- 338
Query: 156 ICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG--LSVFGLIF-- 211
G+ Q G +EAL + ++L SG+KPNEVT S+ CA + G + + + +
Sbjct: 339 --GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 212 ---KAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM--EKRDVVSWTVILDVFIEMGDL 266
K G V N LI + K +VD AR++FD + ++RDVV+WTV++ + + GD
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+A + EM E + + +PN S L A
Sbjct: 457 NKALELLSEMFEEDCQT-----------------------------RPNAFTISCALVAC 487
Query: 327 ASLKALRSGMHVHAHVLKIGIEK-DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
ASL ALR G +HA+ L+ +F+SN LID+Y+KCG D RLVFD+++ K+
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN---E 544
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V+W S++ GYG++G EEA +FD M K + V+ ++ D FN
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M +V + G + + L D ++G
Sbjct: 605 M-------------------KTVFGVSPGPEHYA---------------CLVDLLGRAGR 630
Query: 502 IESSRRVFDRMP-DKNEISWTVM-----VRGLAESG-YAKESINLFEEMEKTSITPNELT 554
+ ++ R+ + MP + + W + G E G YA E I E S T
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKIT-----ELASNHDGSYT 685
Query: 555 ILSVLFA 561
+LS L+A
Sbjct: 686 LLSNLYA 692
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 150/354 (42%), Gaps = 43/354 (12%)
Query: 338 VHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGL 397
+H +L GI + +++ LI Y G + D A V WNS+I YG
Sbjct: 47 IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSD-AGVYHWNSLIRSYGD 104
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSV 457
NG + LF M + +SW+ P+ TF V
Sbjct: 105 NGCANKCLYLFGLM---HSLSWT----------------------------PDNYTFPFV 133
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
A ++S+ G+ H + GF +VF+G AL Y++ + +R+VFD M +
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 518 ISWTVMVRGLAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
+SW ++ A+ G K ++ +F M + P+ +T+++VL C+ G G K +
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG-KQLH 252
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
+ N C+VDM ++ G + EA ++M + D +W ++++G Y
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAG---YSQI 308
Query: 637 QIAERAVKNLWKLAEEHPAGYVLLSNI----YASAGRWIDAMNVRKLMTEKGLR 686
E AV+ K+ EE V+ + YA G +A+ V + M G++
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 48/259 (18%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
K + A + N L V NC+I+ + G++ +A+ +FD M +NEV+WT+L++G+
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
HG E EAL +F ++ G K + VT +
Sbjct: 557 HGYGE-------------------------------EALGIFDEMRRIGFKLDGVTLLVV 585
Query: 191 CKACAEINDFRLGL-------SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFD 243
AC+ G+ +VFG+ G E + L+ L + G ++ A + +
Sbjct: 586 LYACSHSGMIDQGMEYFNRMKTVFGV--SPGPEHYA----CLVDLLGRAGRLNAALRLIE 639
Query: 244 RME-KRDVVSWTVILDVFIEMG--DLGE-ARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
M + V W L G +LGE A E+ ++ S++++ Y +G ++
Sbjct: 640 EMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKD 699
Query: 300 AFRLFRQMTRYSFKPNTSC 318
R+ M K C
Sbjct: 700 VTRIRSLMRHKGVKKRPGC 718
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 333/648 (51%), Gaps = 75/648 (11%)
Query: 57 YLTTRLLIMYLGSRKSLEANEIVKDL--NGF--DLVVHNCMINANIQWGNLEEAQRL--- 109
YL +L Y +++S+E ++ L +GF D +V + + A + +L+ +++
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 110 FDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEAL 169
+P + V T L+ + K G ++ + F +NV+ WT+ I G+V+N E L
Sbjct: 168 LVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGL 227
Query: 170 KLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLS 229
LF ++ E+ V NE T+ ++ AC +++ G G + K+G E +S C L+T
Sbjct: 228 VLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE--LSSC--LVT-- 281
Query: 230 LKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIA 289
+LD++++ GD+ ARR+F+E + V W+ MI
Sbjct: 282 -------------------------SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 290 RYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEK 349
Y +G EA LF++M KPN + VLS ++ L G VH +K+GI
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW- 375
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
D ++NAL+ +Y+KC + +D + VF +ME K++
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVF-------------------------EMESEKDI-- 408
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
V+W++IISG+ ++ +F+ M PN T +S+ A AS+ SL
Sbjct: 409 -------VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 470 GKDLHGKIIKLGF--PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGL 527
G LH +KLGF V +GTAL D YAK GD +S+R +FD + +KN I+W+ M+ G
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 528 AESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPN 587
+ G S+ LFEEM K PNE T S+L AC H+G+V++G KYF+SM YN P+
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 588 GRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLW 647
+HYTC+VDML+R+G L +A D I MP +PD + + L GC + + E +K +
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 648 KLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVE 695
L + + YVL+SN+YAS GRW A VR LM ++GL K G S +E
Sbjct: 642 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 227/533 (42%), Gaps = 109/533 (20%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
LK T + G+ +H L+K LT LL MY + A+++ D+ ++
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERN----------------------EVSW---- 121
V MI ++ EE LF+ M E N + W
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGC 267
Query: 122 -------------TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
T+L+ ++K G + + F + +++ WTA I G+ NG EA
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
L LF K+ +KPN VT +S+ C I + LG SV GL K G +V N+L+ +
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHM 386
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMI 288
K + A+ VF+ ++D+V+W I+ F
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGF---------------------------- 418
Query: 289 ARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGI- 347
+Q+G EA LF +M S PN + + SA ASL +L G +HA+ +K+G
Sbjct: 419 ---SQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFL 475
Query: 348 -EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKE 406
V + AL+D Y+KCG+ + RL+FD+I EK+ ++W++MIGGYG G + E
Sbjct: 476 ASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN---TITWSAMIGGYGKQGDTIGSLE 532
Query: 407 LFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVAS 466
LF+ M K+ + PN+STF+S+L A
Sbjct: 533 LFEEMLKKQ-------------------------------QKPNESTFTSILSACGHTGM 561
Query: 467 LEKGKDLHGKIIK-LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
+ +GK + K F T + D A++G++E + + ++MP + ++
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 222/509 (43%), Gaps = 69/509 (13%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T L+S + G +++ F++ P + W + + N S E +KL+ L++ G +
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
+++ FS KAC E+ D G + + K +V V L+ + K GE+ A V
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKV 198
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
F+ + R+VV WT MIA Y ++ EE
Sbjct: 199 FNDITLRNVVCWT-------------------------------SMIAGYVKNDLCEEGL 227
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
LF +M + N + ++ A L AL G H ++K GIE + +L+D+Y
Sbjct: 228 VLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMY 287
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
KCG+ + R VF+ E +V W +MI GY NG + EA LF M
Sbjct: 288 VKCGDISNARRVFN---EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG-------- 336
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLG 481
+E K PN T +SVL + +LE G+ +HG IK+G
Sbjct: 337 -----VEIK------------------PNCVTIASVLSGCGLIENLELGRSVHGLSIKVG 373
Query: 482 FPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+D + AL YAK ++ VF+ +K+ ++W ++ G +++G E++ LF
Sbjct: 374 I-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFH 432
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY-TCVVDMLSR 600
M S+TPN +T+ S+ AC+ G + G + + + H T ++D ++
Sbjct: 433 RMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAK 492
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSG 629
G A +++ E ++ W++++ G
Sbjct: 493 CGDPQSARLIFDTIE-EKNTITWSAMIGG 520
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 194/384 (50%), Gaps = 44/384 (11%)
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
D+ T ++ ++ G +AR +FD++PE + W VM+ Y + E +L+ +
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
++ F+ + FS L A L+ L +G +H ++K+ +V ++ L+D+Y+KCGE K
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCGEIK 193
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
A ++F+++ RN V W+++I+GY++
Sbjct: 194 ----------------------------------SAHKVFNDITLRNVVCWTSMIAGYVK 219
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
+ + +FN M + + N+ T+ +++ A +++L +GK HG ++K G L
Sbjct: 220 NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL 279
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
T+L D Y K GDI ++RRVF+ + + WT M+ G +G E+++LF++M+ I
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 549 TPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKP---NGRHYTCVVDMLSRSGRLS 605
PN +TI SVL C GL++ L+ S+ + +IK + +V M ++ +
Sbjct: 340 KPNCVTIASVLSGC---GLIEN-LELGRSVHGL-SIKVGIWDTNVANALVHMYAKCYQNR 394
Query: 606 EAEDFINSMPFEPDSNAWASLLSG 629
+A+ ++ M E D AW S++SG
Sbjct: 395 DAK-YVFEMESEKDIVAWNSIISG 417
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 198/436 (45%), Gaps = 54/436 (12%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
L+ T + + QG+ HG L+K+GI L T LL MY+ A + + + D
Sbjct: 248 LIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMP----ERNEVSWTALISG--------------- 127
LV+ MI G++ EA LF M + N V+ +++SG
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 128 -------------------FMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
+ K + ++ + FE +++++W + I GF QNG EA
Sbjct: 368 LSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF--EKHVSVCNSLI 226
L LF ++ V PN VT +S+ ACA + +G S+ K GF V V +L+
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 227 TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEV 282
K G+ AR +FD +E+++ ++W+ ++ + + GD + +F+EM ++ NE
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNES 547
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
+++ +++ +G E + F M + Y+F P+T ++ ++ LA L + +
Sbjct: 548 TFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI--- 604
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE---KDVAHVVSWNSMIGGYGLN 398
+ K+ I+ DV A + G +V +++ D ++ V +++ Y +
Sbjct: 605 IEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNL---YASD 661
Query: 399 GQMEEAKELFDNMPKR 414
G+ +AKE+ + M +R
Sbjct: 662 GRWNQAKEVRNLMKQR 677
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 15/213 (7%)
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYA 533
HG + G D+ + T L Y G + +R VFD++P+ + W VM+R + +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTC 593
E + L++ + K +++ L AC+ +D G K + + + + T
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF--DNVVLTG 181
Query: 594 VVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE-- 651
++DM ++ G + A N + + W S+++G Y + E + ++ E
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAG---YVKNDLCEEGLVLFNRMRENN 237
Query: 652 ----EHPAGYVLLSNIYASA---GRWIDAMNVR 677
E+ G ++++ SA G+W V+
Sbjct: 238 VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVK 270
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 316/597 (52%), Gaps = 68/597 (11%)
Query: 114 PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFL 173
P+++ + T LI + + G VEE+ F+ P ++V++WTA I G+ + ++ A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
++++ G PNE T SS+ K+C + G V G++ K G E + V N+++ +
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNM----- 155
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+ +V ++ A IF ++ +N+V+W+ +I +
Sbjct: 156 ----------------YATCSVTMEA---------ACLIFRDIKVKNDVTWTTLITGFTH 190
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
G ++++QM + + C +I + A AS+ ++ +G +HA V+K G + ++ +
Sbjct: 191 LGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPV 250
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
N+++DLY +CG + EAK F M
Sbjct: 251 MNSILDLYCRCG----------------------------------YLSEAKHYFHEMED 276
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDL 473
++ ++W+ +IS LE +F G +PN TF+S++ A A++A+L G+ L
Sbjct: 277 KDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL 335
Query: 474 HGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRGLAESGY 532
HG+I + GF +V L AL D YAK G+I S+RVF + D+ N +SWT M+ G GY
Sbjct: 336 HGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGY 395
Query: 533 AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYT 592
E++ LF++M + I P+ + ++VL AC H+GLV+KGLKYFN ME Y I P+ Y
Sbjct: 396 GAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYN 455
Query: 593 CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYK-NEQIAERAVKNLWKLAE 651
CVVD+L R+G++ EA + + MPF+PD + W ++L CK +K N I+ A + + +L
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKP 515
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTD 708
+ YV+LS IYA+ G+W+D VRK+M G +K G SW+ V NQV F F +D
Sbjct: 516 KMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQV-FSFAVSD 571
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 215/507 (42%), Gaps = 142/507 (28%)
Query: 93 MINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISW 152
+I + + G +EEA+ LFD MP+R+ V+WTA+I+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMIT-------------------------- 84
Query: 153 TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFK 212
G+ + ++ A + F ++++ G PNE T SS+ K+C + G V G++ K
Sbjct: 85 -----GYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK 139
Query: 213 AGFEKHVSVCNSLI----TLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
G E + V N+++ T S+ M + A +F ++ ++ V+WT ++ F +GD
Sbjct: 140 LGMEGSLYVDNAMMNMYATCSVTM---EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIG 196
Query: 269 ARRIFDEM-PERNEVS-WSVMIA------------------------------------- 289
+++ +M E EV+ + + IA
Sbjct: 197 GLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILD 256
Query: 290 RYNQSGYPEEAFRLFRQM---------------------------TRY---SFKPNTSCF 319
Y + GY EA F +M R+ F PN F
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTF 316
Query: 320 SIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVE 379
+ +++A A++ AL G +H + + G K+V ++NALID+Y+KCG D + VF IV+
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 380 KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+ ++VSW SM+ GYG +G EA ELFD
Sbjct: 377 RR--NLVSWTSMMIGYGSHGYGAEAVELFD------------------------------ 404
Query: 440 NEMLLSGEIPNKSTFSSVLCASASVASLEKG-KDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+M+ SG P++ F +VL A +EKG K + + G D + + D +
Sbjct: 405 -KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 499 SGDIESSRRVFDRMPDK-NEISWTVMV 524
+G I + + +RMP K +E +W ++
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 176/452 (38%), Gaps = 109/452 (24%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIV-KDLNGF 85
+LK + ++ G +HG ++K G+ Y+ ++ MY ++EA ++ +D+
Sbjct: 117 VLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVK 176
Query: 86 DLVVHNCMINANIQWGN------------LEEAQRL-------------FDGMPERNEVS 120
+ V +I G+ LE A+ D + ++
Sbjct: 177 NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIH 236
Query: 121 WTALISGFMKH--------------GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSF 166
+ + GF + G + E+ YF +++I+W I ++ S
Sbjct: 237 ASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSS 295
Query: 167 EALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLI 226
EAL +F + G PN TF+S+ ACA I G + G IF+ GF K+V + N+LI
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 227 TLSLKMGEVDLARSVFDRM-EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWS 285
+ K G + ++ VF + ++R++VSWT S
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVDRRNLVSWT------------------------------S 385
Query: 286 VMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM-HVHAHVLK 344
+MI Y GY EA LF +M +P+ F VLSA + G+ + + +
Sbjct: 386 MMIG-YGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
GI D I N ++DL G G++ EA
Sbjct: 445 YGINPDRDIYNCVVDL----------------------------------LGRAGKIGEA 470
Query: 405 KELFDNMP-KRNDVSWSAIISGYLEHKQFDLV 435
EL + MP K ++ +W AI+ HK L+
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKHNGLI 502
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 207/713 (29%), Positives = 352/713 (49%), Gaps = 86/713 (12%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G +HG +++ G + + LL MY ++ +E+ + + + + V + +I +Q
Sbjct: 199 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 258
Query: 100 WGNLEEAQRLFDGMPERNE---------------------------------------VS 120
L A + F M + N +
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
TA + + K ++++ F+ + N S+ A I G+ Q F+AL LF +L+ SG+
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 378
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+E++ S + +ACA + GL ++GL K+ V V N+ I
Sbjct: 379 GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI-------------- 424
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
D++ + L EA R+FDEM R+ VSW+ +IA + Q+G E
Sbjct: 425 -----------------DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
LF M R +P+ F +L A +L GM +H+ ++K G+ + + +LID+
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
YSKCG ++ + ++ ++G MEE +++ + + VSW+
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRA--------------NVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
+IISGY+ +Q + +F M+ G P+K T+++VL A++AS GK +H ++IK
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 632
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
DV++ + L D Y+K GD+ SR +F++ ++ ++W M+ G A G +E+I LF
Sbjct: 633 ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLF 692
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
E M +I PN +T +S+L AC+H GL+DKGL+YF M+ Y + P HY+ +VD+L +
Sbjct: 693 ERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGK 752
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE-QIAERAVKNLWKLAEEHPAGYVL 659
SG++ A + I MPFE D W +LL C ++N ++AE A L +L + + Y L
Sbjct: 753 SGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTL 812
Query: 660 LSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
LSN+YA AG W ++R+ M L+K GCSWVE+++++H F +P+
Sbjct: 813 LSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPR 865
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 149/582 (25%), Positives = 268/582 (46%), Gaps = 98/582 (16%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+ K+ Q + G+ H H+I +G ++ LL +Y SR D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSR---------------D 98
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
V A +FD MP R+ VSW +I+G+ K + ++ +F P
Sbjct: 99 FV----------------SASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
++V+SW + + G++QNG S +++++F+ + G++ + TF+ I K C+ + D LG+ +
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G++ + G C++ DVV+ + +LD++ +
Sbjct: 203 HGIVVRVG-------CDT------------------------DVVAASALLDMYAKGKRF 231
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
E+ R+F +PE+N VSWS +IA Q+ A + F++M + + + S ++ VL +
Sbjct: 232 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
A+L LR G +HAH LK D + A +D+Y+KC +D +++F
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF------------ 339
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
DN N S++A+I+GY + + +F+ ++ SG
Sbjct: 340 ----------------------DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
++ + S V A A V L +G ++G IK DV + A D Y K + +
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
RVFD M ++ +SW ++ ++G E++ LF M ++ I P+E T S+L AC+ G
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GG 496
Query: 567 LVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+ G++ +S+ + N ++DM S+ G + EAE
Sbjct: 497 SLGYGMEIHSSIVK-SGMASNSSVGCSLIDMYSKCGMIEEAE 537
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 219/469 (46%), Gaps = 47/469 (10%)
Query: 165 SFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNS 224
SF FL + S N FS + K CA+ LG + +GF V N
Sbjct: 32 SFSYFTDFLNQVNSVSTTN---FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNC 88
Query: 225 LITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
L+ + + A VFD+M RDVVSW +++ + + D+ +A F+ MP R+ VSW
Sbjct: 89 LLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSW 148
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ M++ Y Q+G ++ +F M R + + F+I+L + L+ GM +H V++
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEA 404
+G + DV ++AL+D+Y+K + VF I EK+ VSW+++I G N + A
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN---SVSWSAIIAGCVQNNLLSLA 265
Query: 405 KELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASV 464
+ F M K N A +S +S ++SVL + A++
Sbjct: 266 LKFFKEMQKVN-----AGVS--------------------------QSIYASVLRSCAAL 294
Query: 465 ASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMV 524
+ L G LH +K F D + TA D YAK +++ ++ +FD + N S+ M+
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354
Query: 525 RGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
G ++ + +++ LF + + + +E+++ V AC+ + +GL+ + I
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG-----LAI 409
Query: 585 KPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG 629
K + CV +DM + L+EA + M D+ +W ++++
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 436 FAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDT 495
F+ F + L + + FS V A +LE GK H +I GF F+ L
Sbjct: 33 FSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQV 92
Query: 496 YAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAES------------------------- 530
Y S D S+ VFD+MP ++ +SW M+ G ++S
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 531 -GYAK-----ESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
GY + +SI +F +M + I + T +L CS G++ + +
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-GC 211
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ + ++DM ++ R E+ +P E +S +W+++++GC +A + K
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 645 NLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKL 679
+ K+ AG + +IYAS R A++ +L
Sbjct: 271 EMQKV----NAG--VSQSIYASVLRSCAALSELRL 299
>sp|Q9SJK9|PP189_ARATH Pentatricopeptide repeat-containing protein At2g36980,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2
SV=1
Length = 625
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 324/602 (53%), Gaps = 12/602 (1%)
Query: 119 VSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES 178
V T+ I+ K GR+ + F+ P + ++W + + + G EA+ LF +L S
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 179 GVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLA 238
KP++ +F++I CA + + + G + L+ ++GF + V NSLI + K + A
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 239 RSVFDRM--EKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGY 296
VF M + R+ V+W +L ++ A +F EMP+R +W++MI+ + G
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 297 PEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKA-LRSGMHVHAHVLKIGIEKDVFISN 355
E LF++M FKP+ FS +++A ++ + + G VHA +LK G V N
Sbjct: 185 LESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+++ Y+K G D +SI +V VSWNS+I G+ E+A E+F P++N
Sbjct: 245 SVLSFYTKLGSRDDAMRELESI---EVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
V+W+ +I+GY + + F EM+ SG + + +VL A + +A L GK +HG
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 476 KIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKE 535
+I GF ++G AL + YAK GDI+ + R F + +K+ +SW M+ G A +
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 536 SINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVV 595
++ L++ M + I P+ +T + +L CSHSGLV++G F SM Y I H TC++
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 596 DMLSRSGRLSEAEDFINS----MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
DM R G L+EA+D + + ++++W +LL C T+ + ++ R V + K+AE
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELG-REVSKVLKIAE 540
Query: 652 -EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+VLLSN+Y S GRW + +VR+ M E+G++K+ GCSW+EV NQV F +
Sbjct: 541 PSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSH 600
Query: 711 PK 712
P+
Sbjct: 601 PR 602
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 221/493 (44%), Gaps = 72/493 (14%)
Query: 16 SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEA 75
SF + + TC S V GR + +I++G + L+ MY +L A
Sbjct: 72 SFTAILSTC-------ASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 76 NEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVE 135
N++ +D+ C RNEV+W +L+ +M + E
Sbjct: 125 NKVFRDM---------CC--------------------DSRNEVTWCSLLFAYMNAEQFE 155
Query: 136 ESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC- 194
++ F P + +W I G G L LF ++LES KP+ TFSS+ AC
Sbjct: 156 AALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A+ ++ G V ++ K G+ V NS+++ K+G D A + +E VSW
Sbjct: 216 ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWN 275
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
I+D +++G+ +A +F PE+N V+W+ MI Y ++G E+A R F +M +
Sbjct: 276 SIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS 335
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ + VL A + L L G +H ++ G + ++ NAL++LY+KCG+ K+ F
Sbjct: 336 DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF 395
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
I KD +VSWN+M+ +G++G ++A +L+DN
Sbjct: 396 GDIANKD---LVSWNTMLFAFGVHGLADQALKLYDN------------------------ 428
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-LGFPYDVFLGTALT 493
M+ SG P+ TF +L + +E+G + ++K P +V T +
Sbjct: 429 -------MIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 494 DTYAKSGDIESSR 506
D + + G + ++
Sbjct: 482 DMFGRGGHLAEAK 494
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 385 VVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL 444
+V S I +G++ A+++FD MP+ + V+W+ +++ Y A+F ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
S P+ +F+++L AS+ +++ G+ + +I+ GF + + +L D Y K D S
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 505 SRRVFD---------------------------------RMPDKNEISWTVMVRGLAESG 531
+ +VF MP + +W +M+ G A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACS 563
+ ++LF+EM ++ P+ T S++ ACS
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 342 bits (876), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 195/646 (30%), Positives = 330/646 (51%), Gaps = 71/646 (10%)
Query: 106 AQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFS 165
A +LFD MP+R++++W ++ ++ G E+
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEK----------------------------- 72
Query: 166 FEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSL 225
A++LF ++ SG K + T + + C+ F G + G + + G E +VS+CNSL
Sbjct: 73 --AVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 226 ITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----ERNE 281
I + + G+++L+R VF+ M+ R++ SW IL + ++G + +A + DEM + +
Sbjct: 131 IVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI 190
Query: 282 VSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAH 341
V+W+ +++ Y G ++A + ++M KP+TS S +L A+A L+ G +H +
Sbjct: 191 VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY 250
Query: 342 VLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA------------------ 383
+L+ + DV++ LID+Y K G R+VFD + K++
Sbjct: 251 ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA 310
Query: 384 --------------HVVSWNSMIGGYGLNGQMEEAKELFDNMPKR----NDVSWSAIISG 425
++WNS+ GY G+ E+A ++ M ++ N VSW+AI SG
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 426 YLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD 485
++ F VF +M G PN +T S++L ++ L GK++HG ++ D
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICD 430
Query: 486 VFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEK 545
++ TAL D Y KSGD++S+ +F + +K+ SW M+ G A G +E I F M +
Sbjct: 431 AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 546 TSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLS 605
+ P+ +T SVL C +SGLV +G KYF+ M Y I P H +C+VD+L RSG L
Sbjct: 491 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD 550
Query: 606 EAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
EA DFI +M +PD+ W + LS CK +++ ++AE A K L L + A Y+++ N+Y+
Sbjct: 551 EAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYS 610
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ RW D +R LM +R SW+++ VH F+ + +P
Sbjct: 611 NLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHP 656
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 200/374 (53%), Gaps = 13/374 (3%)
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
LG A ++FDEMP+R++++W+ ++ +SG E+A LFR+M K S +L
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
++ + G +H +VL++G+E +V + N+LI +YS+ G+ + R VF+S+ +++++
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS-- 156
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
SWNS++ Y G +++A L D M K + V+W++++SGY AV
Sbjct: 157 -SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M ++G P+ S+ SS+L A A L+ GK +HG I++ YDV++ T L D Y K+G
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+ +R VFD M KN ++W +V GL+ + K++ L MEK I P+ +T S+
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG 335
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFE---P 618
+ G +K L M+ + PN +T + S++G A M E P
Sbjct: 336 YATLGKPEKALDVIGKMKE-KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 619 DSNAWASLLS--GC 630
++ ++LL GC
Sbjct: 395 NAATMSTLLKILGC 408
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 147/647 (22%), Positives = 266/647 (41%), Gaps = 159/647 (24%)
Query: 19 SYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI 78
+Y T + LL+ +++ +GR +HG++++ G+ + L++MY SR
Sbjct: 87 AYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMY--SRN------- 137
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
G LE ++++F+ M +RN SW +++S + K G V++++
Sbjct: 138 ----------------------GKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAI 175
Query: 139 WYFERNPF----QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ ++++W + + G+ G S +A+ + ++ +G+KP+ + SS+ +A
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
AE +LG ++ G I + V V +LI + +K G + AR VFD M+ +++V+W
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWN 295
Query: 255 VILD-------------VFIEM-------------------GDLGEARRIFD---EMPER 279
++ + I M LG+ + D +M E+
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Query: 280 ----NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSG 335
N VSW+ + + +++G A ++F +M PN + S +L L L L SG
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG 415
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
VH L+ + D +++ AL+D+Y K G+ + +F I K +A SWN M+ GY
Sbjct: 416 KEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA---SWNCMLMGY 472
Query: 396 GLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
+ G+ EE A F+ ML +G P+ TF+
Sbjct: 473 AMFGRGEEG-------------------------------IAAFSVMLEAGMEPDAITFT 501
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK 515
SVL + SG ++ + FD M +
Sbjct: 502 SVLSVCKN-----------------------------------SGLVQEGWKYFDLMRSR 526
Query: 516 NEISWTV-----MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS-HSG--L 567
I T+ MV L SGY E+ + + M S+ P+ + L +C H L
Sbjct: 527 YGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAFLSSCKIHRDLEL 583
Query: 568 VDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
+ K +EP N +Y ++++ S R + E N M
Sbjct: 584 AEIAWKRLQVLEP-----HNSANYMMMINLYSNLNRWEDVERIRNLM 625
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 4/245 (1%)
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y G T G L+ + D VVS + +G YG + A +LFD MPKR+D++W
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDT-RVVS--ASMGFYGRCVSLGFANKLFDEMPKRDDLAW 57
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+ I+ L ++ +F EM SG ST +L ++ +G+ +HG +++
Sbjct: 58 NEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR 117
Query: 480 LGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINL 539
LG +V + +L Y+++G +E SR+VF+ M D+N SW ++ + GY ++I L
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGL 177
Query: 540 FEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLS 599
+EME + P+ +T S+L + GL + M+ I +KP+ + ++ ++
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLKPSTSSISSLLQAVA 236
Query: 600 RSGRL 604
G L
Sbjct: 237 EPGHL 241
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 339 bits (869), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 210/691 (30%), Positives = 335/691 (48%), Gaps = 117/691 (16%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKE--RYLTTRLLIMYLGSRKSLEANEIVKDLN 83
CL + N I + + LI + HK + + RLL++ L +
Sbjct: 6 CLASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGL-------------QFS 52
Query: 84 GFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFER 143
GF + +I+A+ +G++ A+++FD +P W A+I G Y
Sbjct: 53 GFLITK---LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRG------------YSRN 97
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
N FQ +AL ++ + + V P+ TF + KAC+ ++ ++G
Sbjct: 98 NHFQ-------------------DALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
V +F+ GF+ V V N LI L K + AR+VF+ +
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----------------- 181
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
+PER VSW+ +++ Y Q+G P EA +F QM + KP+ VL
Sbjct: 182 ------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 324 SALASLKALRSGMHVHAHVLKIG--IEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+A L+ L+ G +HA V+K+G IE D+ IS L +Y+KCG
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCG---------------- 271
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
Q+ AK LFD M N + W+A+ISGY ++ +F+E
Sbjct: 272 ------------------QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 442 MLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGD 501
M+ P+ + +S + A A V SLE+ + ++ + + + DVF+ +AL D +AK G
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 502 IESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFA 561
+E +R VFDR D++ + W+ M+ G G A+E+I+L+ ME+ + PN++T L +L A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 562 CSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
C+HSG+V +G +FN M + I P +HY CV+D+L R+G L +A + I MP +P
Sbjct: 434 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W +LLS CK +++ ++ E A + L+ + + YV LSN+YA+A W VR M
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
EKGL K GCSWVEVR ++ F +P+
Sbjct: 553 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 338 bits (868), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 207/660 (31%), Positives = 336/660 (50%), Gaps = 104/660 (15%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T L+S F ++G V+E+ FE + + + + GF + +AL+ F+++ V+
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P F+ + K C + + R+G + GL+ K+GF
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS------------------------- 167
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
D+ + T + +++ + + EAR++FD MPER+ VSW+ ++A Y+Q+G A
Sbjct: 168 ------LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 302 RLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+ + M + KP+ VL A+++L+ + G +H + ++ G + V IS AL+D+Y
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDV 417
+KCG + R +FD ++E++ VVSWNSMI Y N +EA +F M K DV
Sbjct: 282 AKCGSLETARQLFDGMLERN---VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 418 S-----------------------------------WSAIISGYLEHKQFDLVFAVF--- 439
S +++IS Y + K+ D ++F
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 440 --------NEMLL----SGEI----------------PNKSTFSSVLCASASVASLEKGK 471
N M+L +G P+ T+ SV+ A A ++ K
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+HG +++ +VF+ TAL D YAK G I +R +FD M +++ +W M+ G G
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ K ++ LFEEM+K +I PN +T LSV+ ACSHSGLV+ GLK F M+ Y+I+ + HY
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
+VD+L R+GRL+EA DFI MP +P N + ++L C+ +KN AE+A + L++L
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 638
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
+ +VLL+NIY +A W VR M +GLRK+ GCS VE++N+VH FF + +P
Sbjct: 639 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHP 698
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 203/429 (47%), Gaps = 77/429 (17%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HG L+K+G + + T L MY R+ EA ++ + DLV N ++ Q
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 100 WGNLEEAQRLFDGMPERN-------------------------EVSWTALISGF------ 128
G A + M E N E+ A+ SGF
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 129 --------MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
K G +E + F+ +NV+SW + I +VQN EA+ +F K+L+ GV
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP +V+ ACA++ D G + L + G +++VSV NSLI++ K EVD A S
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
+F +++ R +VSW + MI + Q+G P +A
Sbjct: 394 MFGKLQSRTLVSW-------------------------------NAMILGFAQNGRPIDA 422
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F QM + KP+T + V++A+A L +H V++ ++K+VF++ AL+D+
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRND 416
Y+KCG RL+FD + E+ HV +WN+MI GYG +G + A ELF+ M K N
Sbjct: 483 YAKCGAIMIARLIFDMMSER---HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 417 VSWSAIISG 425
V++ ++IS
Sbjct: 540 VTFLSVISA 548
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 174/378 (46%), Gaps = 68/378 (17%)
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSW 253
C+ + + R + L+FK G + L++L + G VD A VF+ ++ + V +
Sbjct: 47 CSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 254 TVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK 313
+L F ++ DL +A + F M RY+ +
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRM-------------RYDD------------------VE 132
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
P F+ +L LR G +H ++K G D+F L ++Y+KC + + R V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
FD + E+D +VSWN+++ GY NG A E+ +M + N
Sbjct: 193 FDRMPERD---LVSWNTIVAGYSQNGMARMALEMVKSMCEEN------------------ 231
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
P+ T SVL A +++ + GK++HG ++ GF V + TAL
Sbjct: 232 -------------LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK G +E++R++FD M ++N +SW M+ ++ KE++ +F++M + P ++
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 554 TILSVLFACSHSGLVDKG 571
+++ L AC+ G +++G
Sbjct: 339 SVMGALHACADLGDLERG 356
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 188/436 (43%), Gaps = 81/436 (18%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T + +L +++ L+ G+ +HG+ +++G ++T L+ MY A ++ +
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------P---------------------- 114
++V N MI+A +Q N +EA +F M P
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 115 -----------ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
+RN +LIS + K V+ + F + + ++SW A I GF QNG
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNG 417
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCN 223
+AL F ++ VKP+ T+ S+ A AE++ + G++ ++ +K+V V
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477
Query: 224 SLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVS 283
+L+ + K G + +AR +FD M +R V +W ++D
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID------------------------- 512
Query: 284 WSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
Y G+ + A LF +M + + KPN F V+SA + + +G+ +++
Sbjct: 513 ------GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMM 565
Query: 344 K--IGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS-WNSMIGGYGLNGQ 400
K IE + A++DL + G + +D I++ V V+ + +M+G ++
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEA---WDFIMQMPVKPAVNVYGAMLGACQIHKN 622
Query: 401 M----EEAKELFDNMP 412
+ + A+ LF+ P
Sbjct: 623 VNFAEKAAERLFELNP 638
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 338 bits (868), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 311/592 (52%), Gaps = 72/592 (12%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
ALI+ ++K G V+ + F+R P +++ISW A I G+ +NG E L+LF + V P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
+ +T +S+ AC + D RLG + + GF +SVCNSL + L G
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG--------- 346
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
SW EA ++F M ++ VSW+ MI+ Y + P++A
Sbjct: 347 ---------SWR-------------EAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+R M + S KP+ + VLSA A+L L +G+ +H +K + V ++N LI++YS
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
KC +++A ++F N+P++N +SW++I
Sbjct: 445 KCK----------------------------------CIDKALDIFHNIPRKNVISWTSI 470
Query: 423 ISGY-LEHKQFD-LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
I+G L ++ F+ L+F +M L PN T ++ L A A + +L GK++H +++
Sbjct: 471 IAGLRLNNRCFEALIFLRQMKMTLQ---PNAITLTAALAACARIGALMCGKEIHAHVLRT 527
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
G D FL AL D Y + G + ++ F+ K+ SW +++ G +E G + LF
Sbjct: 528 GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELF 586
Query: 541 EEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSR 600
+ M K+ + P+E+T +S+L CS S +V +GL YF+ ME Y + PN +HY CVVD+L R
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGR 645
Query: 601 SGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLL 660
+G L EA FI MP PD W +LL+ C+ + + E + +++++L ++ Y+LL
Sbjct: 646 AGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILL 705
Query: 661 SNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
N+YA G+W + VR++M E GL GCSWVEV+ +VH F ++P+
Sbjct: 706 CNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQ 757
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 224/483 (46%), Gaps = 84/483 (17%)
Query: 158 GFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEK 217
G NG EA+KL + E V +E F ++ + C G V+ +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL------ 121
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP 277
+S+ +L +++G LA +F+ G+L +A +F +M
Sbjct: 122 -----SSMSSLGVELGNAFLA--------------------MFVRFGNLVDAWYVFGKMS 156
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGM 336
ERN SW+V++ Y + GY +EA L+ +M KP+ F VL + L G
Sbjct: 157 ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGK 216
Query: 337 HVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYG 396
VH HV++ G E D+ + NALI +Y KCG+ K RL
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL------------------------ 252
Query: 397 LNGQMEEAKELFDNMPKRNDVSWSAIISGYLE----HKQFDLVFAVFNEMLLSGEIPNKS 452
LFD MP+R+ +SW+A+ISGY E H+ +L FA+ LS + P+
Sbjct: 253 ----------LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRG---LSVD-PDLM 298
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T +SV+ A + G+D+H +I GF D+ + +LT Y +G + ++F RM
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGL 572
K+ +SWT M+ G + ++I+ + M++ S+ P+E+T+ +VL AC+ G +D G+
Sbjct: 359 ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Query: 573 KYFNSMEPIYNIKPNGRHYTCV----VDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
+ IK Y V ++M S+ + +A D +++P + +W S+++
Sbjct: 419 ELHK-----LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIA 472
Query: 629 GCK 631
G +
Sbjct: 473 GLR 475
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 231/543 (42%), Gaps = 107/543 (19%)
Query: 91 NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
N + +++GNL +A +F M ERN SW L+ G+ K G +E+M + R +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR------M 186
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
W GVKP+ TF + + C I D G V +
Sbjct: 187 LWVG------------------------GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV 222
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
+ G+E + V N+LIT+ +K G+V AR +FDRM +RD++SW
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISW----------------- 265
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLK 330
+ MI+ Y ++G E LF M S P+ + V+SA L
Sbjct: 266 --------------NAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 331 ALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNS 390
R G +HA+V+ G D+ + N+L +Y G ++ +F + KD +VSW +
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD---IVSWTT 368
Query: 391 MIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPN 450
MI GY N +L K D + M P+
Sbjct: 369 MISGYEYN---------------------------FLPDKAID----TYRMMDQDSVKPD 397
Query: 451 KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
+ T ++VL A A++ L+ G +LH IK V + L + Y+K I+ + +F
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDK 570
+P KN ISWT ++ GL + E++ +M K ++ PN +T+ + L AC+ G +
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMC 516
Query: 571 G----LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASL 626
G + + + PN ++DM R GR++ A NS + D +W L
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNA-----LLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNIL 569
Query: 627 LSG 629
L+G
Sbjct: 570 LTG 572
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 218/519 (42%), Gaps = 112/519 (21%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
GR +H ++I TG + + L MYL +
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNA------------------------------ 345
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
G+ EA++LF M ++ VSWT +ISG +E N +
Sbjct: 346 -GSWREAEKLFSRMERKDIVSWTTMISG-------------YEYNFLPD----------- 380
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHV 219
+A+ + + + VKP+E+T +++ ACA + D G+ + L KA +V
Sbjct: 381 -------KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 220 SVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER 279
V N+LI + K +D A +F + +++V+SWT I+ L R F
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII------AGLRLNNRCF------ 481
Query: 280 NEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
EA RQM + + +PN + L+A A + AL G +H
Sbjct: 482 -------------------EALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
AHVL+ G+ D F+ NAL+D+Y +CG F+S +KDV SWN ++ GY G
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVT---SWNILLTGYSERG 577
Query: 400 QMEEAKELFDNMPKR----NDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFS 455
Q ELFD M K +++++ +++ G + + F++M G PN ++
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYA 637
Query: 456 SVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIE----SSRRVFDR 511
V+ L++ H I K+ D + AL + I+ S++ +F+
Sbjct: 638 CVVDLLGRAGELQEA---HKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFEL 694
Query: 512 MPDKNEISWTVMVRGL-AESGYAKESINLFEEMEKTSIT 549
DK + + +++ L A+ G +E + M++ +T
Sbjct: 695 --DKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 731
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 338 bits (867), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 340/692 (49%), Gaps = 71/692 (10%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEI----VKDL 82
L++ S L + L ++ +GI ++Y L SR +I VK
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFE 142
DL V N +++ + G L+ A+++FD M ERN
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN------------------------- 199
Query: 143 RNPFQNVISWTAAICGFVQNGFSFEALKLFLKLL-ESGVKPNEVTFSSICKACAEINDFR 201
V+SWT+ ICG+ + F+ +A+ LF +++ + V PN VT + ACA++ D
Sbjct: 200 ------VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE 253
Query: 202 LGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFI 261
G V+ I +G E + + ++L+ + +K +D+A+
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK---------------------- 291
Query: 262 EMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSI 321
R+FDE N + M + Y + G EA +F M +P+
Sbjct: 292 ---------RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 322 VLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKD 381
+S+ + L+ + G H +VL+ G E I NALID+Y KC +FD + K
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 382 VAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNE 441
V V+WNS++ GY NG+++ A E F+ MP++N VSW+ IISG ++ F+ VF
Sbjct: 403 V---VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 442 ML-LSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
M G + T S+ A + +L+ K ++ I K G DV LGT L D +++ G
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
D ES+ +F+ + +++ +WT + +A +G A+ +I LF++M + + P+ + + L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
ACSH GLV +G + F SM ++ + P HY C+VD+L R+G L EA I MP EP+
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W SLL+ C+ N ++A A + + LA E YVLLSN+YASAGRW D VR M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
EKGLRK G S +++R + H F + +P+
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 245/573 (42%), Gaps = 121/573 (21%)
Query: 141 FERNPFQNVISW------TAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
F + F+N S+ + I G+ +G EA+ LFL+++ SG+ P++ TF AC
Sbjct: 85 FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC 144
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A+ G+ + GLI K G+ K + V NSL+ + GE+D AR VFD M +R+VVSWT
Sbjct: 145 AKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFK 313
MI Y + + ++A LF +M R
Sbjct: 205 -------------------------------SMICGYARRDFAKDAVDLFFRMVRDEEVT 233
Query: 314 PNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLV 373
PN+ V+SA A L+ L +G V+A + GIE + + +AL+D+Y KC
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC--------- 284
Query: 374 FDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFD 433
++ AK LFD N +A+ S Y+
Sbjct: 285 -------------------------NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 434 LVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
VFN M+ SG P++ + S + + + + ++ GK HG +++ GF + AL
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 494 DTYAKSGDIESSRRVFDR-------------------------------MPDKNEISWTV 522
D Y K +++ R+FDR MP+KN +SW
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 523 MVRGLAESGYAKESINLFEEME-KTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPI 581
++ GL + +E+I +F M+ + + + +T++S+ AC H G +D +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY------ 493
Query: 582 YNIKPNG-----RHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
Y I+ NG R T +VDM SR G A NS+ D +AW + + N
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGN- 551
Query: 637 QIAERAVKNLWKLAEE--HPAGYVLLSNIYASA 667
AERA++ + E+ P G + + A +
Sbjct: 552 --AERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 123/233 (52%), Gaps = 3/233 (1%)
Query: 378 VEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDV-SWSAIISGYLEHKQFDLVF 436
++ DV+ + + G + AKE+F+N ++++I GY +
Sbjct: 60 LDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 437 AVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTY 496
+F M+ SG P+K TF L A A + G +HG I+K+G+ D+F+ +L Y
Sbjct: 120 LLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY 179
Query: 497 AKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTI 555
A+ G+++S+R+VFD M ++N +SWT M+ G A +AK++++LF M + +TPN +T+
Sbjct: 180 AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTM 239
Query: 556 LSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAE 608
+ V+ AC+ ++ G K + + I+ N + +VDM + + A+
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRN-SGIEVNDLMVSALVDMYMKCNAIDVAK 291
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 179/428 (41%), Gaps = 53/428 (12%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDL 82
T +C++ + G ++ + +GI + + L+ MY+ A + +
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PERNEV----------------- 119
+L + N M + ++ G EA +F+ M P+R +
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 120 ------------SW----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNG 163
SW ALI +MK R + + F+R + V++W + + G+V+NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 164 FSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF-GLIFKAGFEKHVSVC 222
A + F E+ + N V++++I + + F + VF + + G
Sbjct: 418 EVDAAWETF----ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKR----DVVSWTVILDVFIEMGDLGEARRIFDEMPE 278
S+ + +G +DLA+ ++ +EK DV T ++D+F GD A IF+ +
Sbjct: 474 MSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 279 RNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHV 338
R+ +W+ I +G E A LF M KP+ F L+A + ++ G +
Sbjct: 534 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 339 HAHVLKI-GIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYG 396
+LK+ G+ + ++DL + G ++ +L+ D +E + V WNS++
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN---DVIWNSLLAACR 650
Query: 397 LNGQMEEA 404
+ G +E A
Sbjct: 651 VQGNVEMA 658
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 338 bits (867), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 206/645 (31%), Positives = 327/645 (50%), Gaps = 70/645 (10%)
Query: 71 KSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMK 130
KSL A VK + + N +N + G L A+ F E N S+ ++ + K
Sbjct: 28 KSLHA-LYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 131 HGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSI 190
++ + F+ P + +S+ I G+ +F A+ LF ++ + G + + T S +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 191 CKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
AC + D L F + GF+ + SV N+ +T K G + A SVF M
Sbjct: 147 IAACCDRVDLIKQLHCFSV--SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM----- 199
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
DE+ R+EVSW+ MI Y Q +A L+++M
Sbjct: 200 -----------------------DEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK-- 368
FK + + VL+AL SL L G H ++K G ++ + + LID YSKCG
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGM 294
Query: 369 -DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
D VF I+ D+ V WN+MI GY +N ++ E A+ S
Sbjct: 295 YDSEKVFQEILSPDL---VVWNTMISGYSMNEELSE----------------EAVKS--- 332
Query: 428 EHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYD-V 486
F +M G P+ +F V A ++++S + K +HG IK P + +
Sbjct: 333 -----------FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ AL Y KSG+++ +R VFDRMP+ N +S+ M++G A+ G+ E++ L++ M +
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PN++T ++VL AC+H G VD+G +YFN+M+ + I+P HY+C++D+L R+G+L E
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
AE FI++MP++P S AWA+LL C+ +KN +AERA L + YV+L+N+YA
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYAD 561
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A +W + +VRK M K +RK GCSW+EV+ + H F + +P
Sbjct: 562 ARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 194/433 (44%), Gaps = 50/433 (11%)
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
K+ AE D G S+ L K+ + N + L K G + AR+ F E+ +V
Sbjct: 17 KSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVF 75
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
S+ VI+ + + + AR++FDE+P+ + VS++ +I+ Y + A LF++M +
Sbjct: 76 SYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
F+ + S +++A L +H + + G + ++NA + YSK G ++
Sbjct: 136 FEVDGFTLSGLIAACCDRVDLIKQLHCFS--VSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
VF + E + VSWNSMI YG +HK+
Sbjct: 194 SVFYGMDE--LRDEVSWNSMIVAYG-------------------------------QHKE 220
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
A++ EM+ G + T +SVL A S+ L G+ HGK+IK GF + +G+
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 492 LTDTYAKSGDIES---SRRVFDRMPDKNEISWTVMVRGLA-ESGYAKESINLFEEMEKTS 547
L D Y+K G + S +VF + + + W M+ G + ++E++ F +M++
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIG 340
Query: 548 ITPNELTILSVLFACSHSGLVDK-----GLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
P++ + + V ACS+ + GL S P I N ++ + +SG
Sbjct: 341 HRPDDCSFVCVTSACSNLSSPSQCKQIHGLA-IKSHIPSNRISVN----NALISLYYKSG 395
Query: 603 RLSEAEDFINSMP 615
L +A + MP
Sbjct: 396 NLQDARWVFDRMP 408
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 50/302 (16%)
Query: 23 TCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL---GSRKSLEANEIV 79
T +L +TS + +I GR HG LIK G H+ ++ + L+ Y G ++ ++
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 80 KDLNGFDLVVHNCMINANIQWGNL-EEAQRLFDGM------------------------P 114
+++ DLVV N MI+ L EEA + F M P
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 115 ER---------------NEVSW-TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICG 158
+ N +S ALIS + K G ++++ W F+R P N +S+ I G
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 159 FVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI---FKAGF 215
+ Q+G EAL L+ ++L+SG+ PN++TF ++ ACA G F + FK
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Query: 216 EKHVSVCNSLITLSLKMGEVDLARSVFDRME-KRDVVSWTVILDVFIEMGDLGEARRIFD 274
E C +I L + G+++ A D M K V+W +L + ++ A R +
Sbjct: 482 EAEHYSC--MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
Query: 275 EM 276
E+
Sbjct: 540 EL 541
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 77/210 (36%), Gaps = 42/210 (20%)
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIK----------------------LGFPYDVFLGT 490
TF +L S + L GK LH +K L + F T
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 491 ---------ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFE 541
+ YAK I +R++FD +P + +S+ ++ G A++ ++ LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 542 EMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCV----VDM 597
M K + T+ ++ AC + K L F ++ Y+ V V
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCF-------SVSGGFDSYSSVNNAFVTY 182
Query: 598 LSRSGRLSEAEDFINSMPFEPDSNAWASLL 627
S+ G L EA M D +W S++
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMI 212
>sp|P0C7R0|PPR69_ARATH Pentatricopeptide repeat-containing protein At1g32415,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2
SV=1
Length = 761
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 343/646 (53%), Gaps = 53/646 (8%)
Query: 101 GNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFV 160
G L+EA+ LF+ MPERN V+ A+++G++K R+ E+ F P +NV+SWT +
Sbjct: 91 GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALC 149
Query: 161 QNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVS 220
+G S +A++LF ++ E V V+++++ D V F A + V
Sbjct: 150 DDGRSEDAVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQV----FDAMPSRDVV 201
Query: 221 VCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERN 280
N++I ++ ++ A+ +F M +++VV+WT ++ + GD+ EA R+F EMPERN
Sbjct: 202 SWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 281 EVSWSVMIARYNQSGYPEEAFRLFRQMTR--YSFKPNTSCFSIVLSALASLKA--LRSGM 336
VSW+ MI+ + + EA LF +M + + PN + A L R G
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 321
Query: 337 HVHAHVLKIGIEK--------------------------------DVFISNALIDLYSKC 364
+HA V+ G E D+ N +I+ Y K
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIIS 424
G+ + +F+ + K + VSW SMI GY G + A LF + ++ V+W+ +IS
Sbjct: 382 GDLERAETLFERV--KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMIS 439
Query: 425 GYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPY 484
G ++++ F ++ ++M+ G P ST+S +L ++ + ++L++GK +H I K Y
Sbjct: 440 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACY 499
Query: 485 --DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
D+ L +L YAK G IE + +F +M K+ +SW M+ GL+ G A +++NLF+E
Sbjct: 500 DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKE 559
Query: 543 MEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSG 602
M + PN +T L VL ACSHSGL+ +GL+ F +M+ Y+I+P HY ++D+L R+G
Sbjct: 560 MLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAG 619
Query: 603 RLSEAEDFINSMPFEPDSNAWASLLSGC----KTYKNEQIAERAVKNLWKLAEEHPAGYV 658
+L EAE+FI+++PF PD + +LL C + E IAERA L +L + G+V
Sbjct: 620 KLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHV 679
Query: 659 LLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFF 704
L N+YA GR +RK M KG++K+ GCSWV V + + F
Sbjct: 680 ALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFL 725
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 229/484 (47%), Gaps = 82/484 (16%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
+A ++ + D+V N MI I+ +EEA+ LF M E+N V+WT+++ G+ ++G
Sbjct: 187 KAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGD 246
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE--SGVKPNEVTFSSIC 191
V E+ F P +N++SWTA I GF N EAL LFL++ + V PN T S+
Sbjct: 247 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLA 306
Query: 192 KACAEIN-DF-RLGLSVFGLIFKAGFEK-------------------------------- 217
AC + +F RLG + + G+E
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF 366
Query: 218 HVSVCNSLITLSLKMGEVDLARSVFDRMEK-RDVVSWTVILDVFIEMGDLGEARRIFDEM 276
+ CN +I LK G+++ A ++F+R++ D VSWT ++D ++E GD+ A +F ++
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 277 PERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGM 336
+++ V+W+VMI+ Q+ EA L M R KP S +S++LS+ + L G
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 337 HVHAHVLKIGI--EKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
H+H + K + D+ + N+L+ +Y+KCG +D +F +V+KD VSWNSMI G
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD---TVSWNSMIMG 543
Query: 395 YGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTF 454
+G ++A L F EML SG+ PN TF
Sbjct: 544 LSHHGLADKALNL-------------------------------FKEMLDSGKKPNSVTF 572
Query: 455 SSVLCASASVASLEKGKDLHGKI-----IKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
VL A + + +G +L + I+ G + + ++ D ++G ++ +
Sbjct: 573 LGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI----SMIDLLGRAGKLKEAEEFI 628
Query: 510 DRMP 513
+P
Sbjct: 629 SALP 632
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 447 EIPNKSTF-------SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS 499
+IPN ++ +++ S L + L KI + G V T+L YAK+
Sbjct: 31 KIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKT 90
Query: 500 GDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVL 559
G ++ +R +F+ MP++N ++ M+ G + E+ LF EM K N ++ +L
Sbjct: 91 GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVML 145
Query: 560 FACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPD 619
A G + ++ F+ M P N+ + +V L R+G + +A+ ++MP D
Sbjct: 146 TALCDDGRSEDAVELFDEM-PERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMP-SRD 199
Query: 620 SNAWASLLSG 629
+W +++ G
Sbjct: 200 VVSWNAMIKG 209
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 267/466 (57%), Gaps = 35/466 (7%)
Query: 247 KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ 306
+ D+V +L+++ + G L EAR++F++MP+R+ V+W+ +I+ Y+Q P +A F Q
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 307 MTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
M R+ + PN S V+ A A+ + G +H +K G + +V + +AL+DLY++
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR--- 208
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
YGL M++A+ +FD + RNDVSW+A+I+G+
Sbjct: 209 ----------------------------YGL---MDDAQLVFDALESRNDVSWNALIAGH 237
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+ +F ML G P+ +++S+ A +S LE+GK +H +IK G
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
F G L D YAKSG I +R++FDR+ ++ +SW ++ A+ G+ KE++ FEEM +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
I PNE++ LSVL ACSHSGL+D+G Y+ M+ I P HY VVD+L R+G L+
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 607 AEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYAS 666
A FI MP EP + W +LL+ C+ +KN ++ A +++++L + P +V+L NIYAS
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 667 AGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
GRW DA VRK M E G++K CSWVE+ N +H F + +P+
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQ 522
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 201/445 (45%), Gaps = 66/445 (14%)
Query: 69 SRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGF 128
S LE + I D ++ ++ C + + G + A + + + V L++ +
Sbjct: 47 SSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTLLNMY 105
Query: 129 MKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFS 188
K G +EE+ FE+ P ++ ++WT I G+ Q+ +AL F ++L G PNE T S
Sbjct: 106 AKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLS 165
Query: 189 SICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKR 248
S+ KA A G + G K GF+ +V V ++L+ L + G +D A+ VFD +E R
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 249 DVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT 308
N+VSW+ +IA + + E+A LF+ M
Sbjct: 226 -------------------------------NDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 309 RYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK 368
R F+P+ ++ + A +S L G VHA+++K G + F N L+D+Y+K G
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 369 DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLE 428
D R +FD + ++D VVSWNS++ Y +G +EA V W
Sbjct: 315 DARKIFDRLAKRD---VVSWNSLLTAYAQHGFGKEA------------VWW--------- 350
Query: 429 HKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
F EM G PN+ +F SVL A + L++G + + K G + +
Sbjct: 351 ----------FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 489 GTALTDTYAKSGDIESSRRVFDRMP 513
+ D ++GD+ + R + MP
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMP 425
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLE-KGKDLHGKIIKLGFPYDVFLGTA 491
DL+ + L IP F + L +V L +G+ +H I++ F +D+ +G
Sbjct: 41 DLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNT 100
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
L + YAK G +E +R+VF++MP ++ ++WT ++ G ++ +++ F +M + +PN
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 552 ELTILSVLFACS--HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAED 609
E T+ SV+ A + G L F N + ++D+ +R G + +A+
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVK---CGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 610 FINSMPFEPDSNAWASLLSG 629
+++ D +W +L++G
Sbjct: 218 VFDALESRNDV-SWNALIAG 236
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 130/324 (40%), Gaps = 47/324 (14%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LHG +K G ++ + LL +Y +A + L + V N +I + +
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 100 WGNLEEAQRLFDGMPER----NEVSWTALI-----SGFMKHGR----------------- 133
E+A LF GM + S+ +L +GF++ G+
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 134 -------------VEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
+ ++ F+R ++V+SW + + + Q+GF EA+ F ++ G+
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
+PNE++F S+ AC+ G + L+ K G +++ L + G+++ A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 241 VFDRMEKRDVVS-WTVILDVF-----IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQS 294
+ M + W +L+ E+G A +F+ P+ + ++ Y
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYA-AEHVFELDPD-DPGPHVILYNIYASG 477
Query: 295 GYPEEAFRLFRQMTRYSFKPNTSC 318
G +A R+ ++M K +C
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPAC 501
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 335 bits (858), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 197/612 (32%), Positives = 313/612 (51%), Gaps = 84/612 (13%)
Query: 125 ISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNE 184
I+ + G++ E+ F+ +++ SW + + G+ N +A KLF ++ +
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD------- 76
Query: 185 VTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR 244
+++ N L++ +K GE+D AR VFD
Sbjct: 77 --------------------------------RNIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 245 MEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLF 304
M +R+VVSWT ++ ++ G + A +F +MPE+N+VSW+VM+ + Q G ++A +L+
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 305 RQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKC 364
+ TS ++ L + + + E+ V ++ Y +
Sbjct: 165 EMIPDKDNIARTS----MIHGLCKEGRVDEAREIFDEMS----ERSVITWTTMVTGYGQN 216
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP------------ 412
D R +FD + EK VSW SM+ GY NG++E+A+ELF+ MP
Sbjct: 217 NRVDDARKIFDVMPEKTE---VSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMIS 273
Query: 413 -------------------KRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLSGEIPNKS 452
+RND SW +I + E F+L +F M G P
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIH-ERNGFELEALDLFILMQKQGVRPTFP 332
Query: 453 TFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM 512
T S+L AS+ASL GK +H ++++ F DV++ + L Y K G++ S+ +FDR
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 513 PDKNEISWTVMVRGLAESGYAKESINLFEEMEKT-SITPNELTILSVLFACSHSGLVDKG 571
P K+ I W ++ G A G +E++ +F EM + S PNE+T ++ L ACS++G+V++G
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Query: 572 LKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCK 631
LK + SME ++ +KP HY C+VDML R+GR +EA + I+SM EPD+ W SLL C+
Sbjct: 453 LKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACR 512
Query: 632 TYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGC 691
T+ +AE K L ++ E+ Y+LLSN+YAS GRW D +RKLM + +RKS GC
Sbjct: 513 THSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGC 572
Query: 692 SWVEVRNQVHFF 703
SW EV N+VH F
Sbjct: 573 SWTEVENKVHAF 584
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 204/396 (51%), Gaps = 47/396 (11%)
Query: 66 YLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALI 125
Y + +A ++ ++ +++ N +++ ++ G ++EA+++FD MPERN VSWTAL+
Sbjct: 58 YFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALV 117
Query: 126 SGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEV 185
G++ +G+V+ + F + P +N +SWT + GF+Q+G +A KL+ + +
Sbjct: 118 KGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS 177
Query: 186 TFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRM 245
+CK +++ R IF E+ V +++T + VD AR +FD M
Sbjct: 178 MIHGLCKE-GRVDEAR-------EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 246 EKRDVVSWTVILDVFI-------------------------------EMGDLGEARRIFD 274
++ VSWT +L ++ + G++ +ARR+FD
Sbjct: 230 PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFD 289
Query: 275 EMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRS 334
M ERN+ SW +I + ++G+ EA LF M + +P +LS ASL +L
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 335 GMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGG 394
G VHA +++ + DV++++ L+ +Y KCGE +L+FD KD ++ WNS+I G
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD---IIMWNSIISG 406
Query: 395 YGLNGQMEEAKELFDNMP-----KRNDVSWSAIISG 425
Y +G EEA ++F MP K N+V++ A +S
Sbjct: 407 YASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 209/453 (46%), Gaps = 86/453 (18%)
Query: 223 NSLITLSLKMGEVDLA-------------------------------RSVFDRMEKRDVV 251
N IT ++G++ A R +FD M R+++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS 311
SW ++ +++ G++ EAR++FD MPERN VSW+ ++ Y +G + A LF +M
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP--- 137
Query: 312 FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGR 371
+ N ++++L + ++ + +KD ++I K G + R
Sbjct: 138 -EKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 372 LVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQ 431
+FD + E+ V++W +M+ GYG N ++++A+++FD MP++ +VSW++++ GY+++ +
Sbjct: 193 EIFDEMSERS---VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR 249
Query: 432 FDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTA 491
+ +F M P K V+ +A ++ L
Sbjct: 250 IEDAEELFEVM------PVK----PVIACNAMISGL------------------------ 275
Query: 492 LTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPN 551
+ G+I +RRVFD M ++N+ SW +++ +G+ E+++LF M+K + P
Sbjct: 276 -----GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 552 ELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFI 611
T++S+L C+ + G K ++ + + ++ M + G L +++
Sbjct: 331 FPTLISILSVCASLASLHHG-KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 612 NSMPFEPDSNAWASLLSGCKTYKNEQIAERAVK 644
+ P + D W S++SG Y + + E A+K
Sbjct: 390 DRFPSK-DIIMWNSIISG---YASHGLGEEALK 418
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 156/322 (48%), Gaps = 40/322 (12%)
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR 133
EA EI +++ ++ M+ Q +++A+++FD MPE+ EVSWT+++ G++++GR
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR 249
Query: 134 VEESMWYFERNPFQNVISWTAAICGFVQ-------------------------------N 162
+E++ FE P + VI+ A I G Q N
Sbjct: 250 IEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
GF EAL LF+ + + GV+P T SI CA + G V + + F+ V V
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMP----- 277
+ L+T+ +K GE+ ++ +FDR +D++ W I+ + G EA ++F EMP
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGST 429
Query: 278 ERNEVSWSVMIARYNQSGYPEEAFRLFRQM-TRYSFKPNTSCFSIVLSALASLKALRSGM 336
+ NEV++ ++ + +G EE +++ M + + KP T+ ++ ++ L M
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 337 HVHAHVLKIGIEKDVFISNALI 358
+ + + +E D + +L+
Sbjct: 490 EM---IDSMTVEPDAAVWGSLL 508
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 188/385 (48%), Gaps = 47/385 (12%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T +LI +L + +A ++ + + D + MI+ + G ++EA+ +FD M ER+ +
Sbjct: 145 TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI 204
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF------- 172
+WT +++G+ ++ RV+++ F+ P + +SWT+ + G+VQNG +A +LF
Sbjct: 205 TWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP 264
Query: 173 --------------------LKLLESGVKPNEVTFSSICKACAEINDFRL-GLSVFGLIF 211
++ +S + N+ ++ ++ K E N F L L +F L+
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI-HERNGFELEALDLFILMQ 323
Query: 212 KAGFEKH-------VSVCNSLITLSL-KMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
K G +SVC SL +L K L R FD DV +V++ ++I+
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD----VDVYVASVLMTMYIKC 379
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMT-RYSFKPNTSCFSIV 322
G+L +++ IFD P ++ + W+ +I+ Y G EEA ++F +M S KPN F
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 323 LSALASLKALRSGMHVHAHVLKI-GIEKDVFISNALIDLYSKCGETKDGRLVFDSI-VEK 380
LSA + + G+ ++ + + G++ ++D+ + G + + DS+ VE
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAK 405
D A W S++G + Q++ A+
Sbjct: 500 DAA---VWGSLLGACRTHSQLDVAE 521
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 8 LFSINPETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYL 67
LF + + T + +L S + G+ +H L++ + Y+ + L+ MY+
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 68 GSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMP-----ERNEVSWT 122
+ +++ I D+++ N +I+ G EEA ++F MP + NEV++
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 123 ALISGFMKHGRVEESMWYFERNP----FQNVISWTAAICGFVQNGFSF-EALKLFLKLLE 177
A +S G VEE + +E + + + A + + F EA+++ +
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT- 496
Query: 178 SGVKPNEVTFSSICKAC 194
V+P+ + S+ AC
Sbjct: 497 --VEPDAAVWGSLLGAC 511
>sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protein At5g19020,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2
SV=1
Length = 685
Score = 335 bits (858), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 344/660 (52%), Gaps = 38/660 (5%)
Query: 28 LKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDL 87
L S N V GR +H ++K+G+ Y+ +L MY R +A + +D D
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 88 VVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQ 147
N M++ ++ L +A +LFD MPER+ VS+T LI G+ ++ +
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ-------------- 153
Query: 148 NVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVF 207
W+ EA++LF ++ G+ NEVT +++ AC+ + +
Sbjct: 154 ----WS-------------EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQ 196
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
L K E V V +L+ + + AR +FD M +R++V+W V+L+ + + G +
Sbjct: 197 SLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIE 256
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+A +FD++ E++ VSW MI + +EA + +M R KP+ +LSA A
Sbjct: 257 QAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASA 316
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
G+ +H ++K G + F+ +I Y+ + K F++ V+ H+ S
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD---HIAS 373
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
N++I G+ NG +E+A+E+FD ++ SW+A+ISGY + L +F EM+ S +
Sbjct: 374 RNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQ 433
Query: 448 I-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
+ P+ T SV A +S+ SLE+GK H + P + L A+ D YAK G IE++
Sbjct: 434 VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 507 RVFDRMPD--KNEIS-WTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS 563
+F + + + IS W ++ G A G+AK +++L+ +++ I PN +T + VL AC
Sbjct: 494 NIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
Query: 564 HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAW 623
H+GLV+ G YF SM+ + I+P+ +HY C+VD+L ++GRL EA++ I MP + D W
Sbjct: 554 HAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIW 613
Query: 624 ASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEK 683
LLS +T+ N +IAE A L + H V+LSN+YA AGRW D VR+ M +
Sbjct: 614 GMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 63/249 (25%)
Query: 444 LSGEIPN-KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKS--- 499
SGE + + S L + AS + G+ +H +++K G + ++ ++ + YAK
Sbjct: 33 FSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLL 92
Query: 500 GDIES----------------------SRR------VFDRMPDKNEISWTVMVRGLAESG 531
D ES SRR +FD MP+++ +S+T +++G A++
Sbjct: 93 ADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNN 152
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSH-SGLVD----KGLKYFNSMEPIYNIKP 586
E++ LF EM I NE+T+ +V+ ACSH G+ D + L +E +
Sbjct: 153 QWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVST 212
Query: 587 NGRHYTCVVDML-------------------------SRSGRLSEAEDFINSMPFEPDSN 621
N H C+ L S++G + +AE+ + + E D
Sbjct: 213 NLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT-EKDIV 271
Query: 622 AWASLLSGC 630
+W +++ GC
Sbjct: 272 SWGTMIDGC 280
>sp|Q9LHN5|PP242_ARATH Putative pentatricopeptide repeat-containing protein At3g18840
OS=Arabidopsis thaliana GN=PCMP-E92 PE=2 SV=1
Length = 678
Score = 332 bits (852), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 344/638 (53%), Gaps = 19/638 (2%)
Query: 79 VKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESM 138
+K + V N ++N + G L EA+ +FD M ERN SW A+I+ ++K V+E+
Sbjct: 15 IKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEAR 74
Query: 139 WYFER-NPFQNVISWTAAICGFVQ-NGFSFEALKLFLKLL---ESGVKPNEVTFSSICKA 193
FE N +++I++ + GF + +G EA+++F ++ + + ++ T +++ K
Sbjct: 75 ELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKL 134
Query: 194 CAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDR--MEKRDVV 251
A++ + G + G++ K G + +SLI + K G+ ++F+ +E D V
Sbjct: 135 SAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSV 194
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPERNE-VSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
+ ++ + GD+ +A +F PE N+ +SW+ +IA Y Q+GY EEA ++ M
Sbjct: 195 ARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEEN 254
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETK-- 368
K + F VL+ L+SLK+L+ G VHA VLK G + F+S+ ++D+Y KCG K
Sbjct: 255 GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYA 314
Query: 369 -DGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYL 427
L++ ++ S +SMI GY G+M EAK LFD++ ++N V W+A+ GYL
Sbjct: 315 ESAHLLYG------FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 428 EHKQFDLVFAVFNEMLLS-GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
+Q D V + + + P+ SVL A + A +E GK++HG ++ G D
Sbjct: 369 NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDK 428
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
L TA D Y+K G++E + R+FD +++ + + M+ G A G+ +S FE+M +
Sbjct: 429 KLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 547 SITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSE 606
P+E+T +++L AC H GLV +G KYF SM YNI P HYTC++D+ ++ RL +
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 607 AEDFINSM-PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA 665
A + + + E D+ + L+ C KN ++ + + L + + + Y+ ++N YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYA 608
Query: 666 SAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
S+GRW + +R M K L GCSW + Q H F
Sbjct: 609 SSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMF 646
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 184/400 (46%), Gaps = 48/400 (12%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG-----FDLVVHN 91
V G LHG L+KTG ++ + L+ MY K + E+ NG D V N
Sbjct: 141 VFYGEQLHGVLVKTGNDGTKFAVSSLIHMY---SKCGKFKEVCNIFNGSCVEFVDSVARN 197
Query: 92 CMINANIQWGNLEEAQRLFDGMPERNE-VSWTALISGFMKHGRVEESMWYFERNPFQNVI 150
MI A + G++++A +F PE N+ +SW LI+G
Sbjct: 198 AMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAG----------------------- 234
Query: 151 SWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLI 210
+ QNG+ EALK+ + + E+G+K +E +F ++ + + ++G V +
Sbjct: 235 --------YAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Query: 211 FKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEAR 270
K G + V + ++ + K G + A S ++ S + ++ + G + EA+
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 271 RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQ-MTRYSFKPNTSCFSIVLSALASL 329
R+FD + E+N V W+ M Y P+ L R + + P++ VL A +
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 330 KALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWN 389
+ G +H H L+ GI D + A +D+YSKCG + +FDS E+D V +N
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERD---TVMYN 463
Query: 390 SMIGGYGLNGQMEEAKELFDNMP----KRNDVSWSAIISG 425
+MI G +G ++ + F++M K +++++ A++S
Sbjct: 464 AMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 135/270 (50%), Gaps = 42/270 (15%)
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+K L+ G H +K G SN L++LYSK G ++ R VFD ++E++ V SW
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERN---VYSW 57
Query: 389 NSMIGGYGLNGQMEEAKELFD-NMPKRNDVSWSAIISGYLEHKQFDL-VFAVFNEMLLSG 446
N++I Y ++EA+ELF+ + +R+ ++++ ++SG+ + + +F EM
Sbjct: 58 NAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 447 EIP---NKSTFSSVLCASASVASLEKGKDLHGKIIKLG-----FPY-------------- 484
+ + T ++++ SA + ++ G+ LHG ++K G F
Sbjct: 118 KDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFK 177
Query: 485 ---DVFLGT-----------ALTDTYAKSGDIESSRRVFDRMPDKNE-ISWTVMVRGLAE 529
++F G+ A+ Y + GDI+ + VF R P+ N+ ISW ++ G A+
Sbjct: 178 EVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQ 237
Query: 530 SGYAKESINLFEEMEKTSITPNELTILSVL 559
+GY +E++ + ME+ + +E + +VL
Sbjct: 238 NGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 62/155 (40%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G+ +HGH ++TGI ++ L T + MY +
Sbjct: 412 GKEIHGHSLRTGILMDKKLVTAFVDMY-------------------------------SK 440
Query: 100 WGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGF 159
GN+E A+R+FD ER+ V + A+I+G HG +S +FE
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE----------------- 483
Query: 160 VQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ E G KP+E+TF ++ AC
Sbjct: 484 --------------DMTEGGFKPDEITFMALLSAC 504
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 332 bits (851), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 216/743 (29%), Positives = 348/743 (46%), Gaps = 111/743 (14%)
Query: 14 ETSFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSL 73
+T N + T L L + Q ++ GRA+HG +I+TG L+ Y K
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 74 EANEIVKDLNGFDLVVHNCMINANIQWGNLEEA---------QRLFDGMPERNEVSW--- 121
+A+ I + D+V N +I Q G + + R D +P ++
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 122 ------------------------------TALISGFMKHGRVEESMWYFERNPFQNVIS 151
T+L+ + K G VE+ + F P +N +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 152 WTAAICGFVQNGFSFEALK---LFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
W+ + G+ G EA+K LFL+ E G + V F+++ + A LG +
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHC 245
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ K G V++ N+L+T+ + + E L E
Sbjct: 246 ITIKNGLLGFVALSNALVTM-------------YSKCE------------------SLNE 274
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
A ++FD +RN ++WS M+ Y+Q+G EA +LF +M KP+ VL+A +
Sbjct: 275 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
+ L G +H+ +LK+G E+ +F + AL+D+Y+K G D
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD------------------- 375
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
A++ FD + +R+ W+++ISGY+++ + ++ M +G I
Sbjct: 376 ---------------ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
PN T +SVL A +S+A+LE GK +HG IK GF +V +G+AL+ Y+K G +E V
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLV 480
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F R P+K+ +SW M+ GL+ +G E++ LFEEM + P+++T ++++ ACSH G V
Sbjct: 481 FRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFV 540
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
++G YFN M + P HY C+VD+LSR+G+L EA++FI S + W LLS
Sbjct: 541 ERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLS 600
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
CK + ++ A + L L + YV LS IY + GR D V K M G+ K
Sbjct: 601 ACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660
Query: 689 GGCSWVEVRNQVHFFFQKTDHNP 711
GCSW+E++NQ H F +P
Sbjct: 661 VGCSWIELKNQYHVFVVGDTMHP 683
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 332 bits (850), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 210/701 (29%), Positives = 352/701 (50%), Gaps = 105/701 (14%)
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHG---RVEESMWYF 141
F ++ +C+ + + G L A RL + E + V + +LIS + K G + E+
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHA-RLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 142 ERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFR 201
R ++V+SW+A + + NG +A+K+F++ LE G+ PN+ ++++ +AC+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 202 LGLSVFGLIFKAG-FEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
+G G + K G FE V V SLI + +K GE
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GE-------------------------- 216
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
A ++FD+M E N V+W++MI R Q G+P EA R F M F+ + S
Sbjct: 217 ---NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 321 IVLSALASLK-----------ALRSG-------------------------------MHV 338
V SA A L+ A+RSG M
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 339 HA----HVLKIGIEKDVFISNALIDLYSK--------------------CGETKD---GR 371
H+ L G K+ ++ I+L+S+ CG D G+
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 372 LVFDSIVEKDVAHVVS-WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
V ++ +A S NS+I + + +ME+A+ F+++ ++N VS++ + G +
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
F+ F + +E+ + TF+S+L A+V S+ KG+ +H +++KLG + +
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL Y+K G I+++ RVF+ M ++N ISWT M+ G A+ G+A + F +M + + P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
NE+T +++L ACSH GLV +G ++FNSM + IKP HY C+VD+L R+G L++A +F
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
IN+MPF+ D W + L C+ + N ++ + A + + +L PA Y+ LSNIYA AG+W
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
++ +R+ M E+ L K GGCSW+EV +++H F+ +P
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHP 734
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 204/474 (43%), Gaps = 79/474 (16%)
Query: 175 LLESGVKP-NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
+ G++P + VTFSS+ K+C DFRLG V + + E + NSLI+L K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 234 EVDLARSVFDRME---KRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIAR 290
+ A VF+ M KRDVVSW S M+A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSW-------------------------------SAMMAC 140
Query: 291 YNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIG-IEK 349
Y +G +A ++F + PN C++ V+ A ++ + G ++K G E
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 350 DVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFD 409
DV + +LID++ K GE E A ++FD
Sbjct: 201 DVCVGCSLIDMFVK-GEN--------------------------------SFENAYKVFD 227
Query: 410 NMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEK 469
M + N V+W+ +I+ ++ F +M+LSG +K T SSV A A + +L
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Query: 470 GKDLHGKIIKLGFPYDVFLGTALTDTYAK---SGDIESSRRVFDRMPDKNEISWTVMVRG 526
GK LH I+ G DV +L D YAK G ++ R+VFDRM D + +SWT ++ G
Sbjct: 288 GKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 527 -LAESGYAKESINLFEEM-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNI 584
+ A E+INLF EM + + PN T S AC + G + +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK-RGL 404
Query: 585 KPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTYKNEQ 637
N V+ M +S R+ +A+ S+ E + ++ + L G C+ EQ
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNLNFEQ 457
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 329 bits (844), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 188/595 (31%), Positives = 313/595 (52%), Gaps = 44/595 (7%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLES--- 178
+ LIS + + R +++ F+ +N S+ A + + F+A LFL + S
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 179 ---GVKPNEVTFSSICKACAEINDFRLG---LSVFGLIFKAGFEKHVSVCNSLITLSLKM 232
+P+ ++ S + KA + +DF LG V G + + GF+ V V N +IT K
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 233 GEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYN 292
++ AR++FDEM ER+ VSW+ MI+ Y+
Sbjct: 181 DNIE-------------------------------SARKVFDEMSERDVVSWNSMISGYS 209
Query: 293 QSGYPEEAFRLFRQMTRYS-FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
QSG E+ ++++ M S FKPN V A L G+ VH +++ I+ D+
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
+ NA+I Y+KCG R +FD + EKD V++ ++I GY +G ++EA LF M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDS---VTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
+W+A+ISG +++ + V F EM+ G PN T SS+L + ++L+ GK
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
++H I+ G ++++ T++ D YAK G + ++RVFD D++ I+WT ++ A G
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHG 446
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
+ + +LF++M+ P+++T+ +VL A +HSG D F+SM Y+I+P HY
Sbjct: 447 DSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY 506
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
C+V +LSR+G+LS+A +FI+ MP +P + W +LL+G + +IA A L+++
Sbjct: 507 ACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP 566
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
E+ Y +++N+Y AGRW +A VR M GL+K G SW+E + F K
Sbjct: 567 ENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAK 621
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 230/475 (48%), Gaps = 52/475 (10%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ V N MI + N+E A+++FD M ER+ VSW ++ISG+ + G
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG------------- 212
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLK--LLESGVKPNEVTFSSICKACAEINDFRLG 203
SFE K K L S KPN VT S+ +AC + +D G
Sbjct: 213 -------------------SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFG 253
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
L V + + + +S+CN++I K G +D AR++FD M ++D V++ I+ ++
Sbjct: 254 LEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAH 313
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVL 323
G + EA +F EM +W+ MI+ Q+ + EE FR+M R +PNT S +L
Sbjct: 314 GLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLL 373
Query: 324 SALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVA 383
+L L+ G +HA ++ G + +++++ ++ID Y+K G + VFD+ ++
Sbjct: 374 PSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS-- 431
Query: 384 HVVSWNSMIGGYGLNGQMEEAKELFDNM----PKRNDVSWSAIISGYLEHKQFDLVFAVF 439
+++W ++I Y ++G + A LFD M K +DV+ +A++S + D+ +F
Sbjct: 432 -LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIF 490
Query: 440 NEMLLSGEI-PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT--ALTDTY 496
+ ML +I P ++ ++ + L + K+ P D AL +
Sbjct: 491 DSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM-----PIDPIAKVWGALLNGA 545
Query: 497 AKSGDIESSRRVFDR---MPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI 548
+ GD+E +R DR M +N ++T+M ++G +E+ + +M++ +
Sbjct: 546 SVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGL 600
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 336 MHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGY 395
+ +HA ++ I+ D F+++ LI Y++ + VFD I V + S+N+++ Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEIT---VRNAFSYNALLIAY 98
Query: 396 GLNGQMEEAKELFDNMPKRNDVSW--SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKST 453
+A LF +SW S+ S P+ +
Sbjct: 99 TSREMYFDAFSLF--------LSWIGSSCYSS-------------------DAARPDSIS 131
Query: 454 FSSVLCASASVASLEKG---KDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFD 510
S VL A + G + +HG +I+ GF DVF+G + Y K +IES+R+VFD
Sbjct: 132 ISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFD 191
Query: 511 RMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTS-ITPNELTILSVLFACSHSGLVD 569
M +++ +SW M+ G ++SG ++ +++ M S PN +T++SV AC S +
Sbjct: 192 EMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLI 251
Query: 570 KGLKYFNSMEPIYN-IKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
GL+ M I N I+ + V+ ++ G L A + M E DS + +++S
Sbjct: 252 FGLEVHKKM--IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDSVTYGAIIS 308
Query: 629 G 629
G
Sbjct: 309 G 309
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 329 bits (843), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/603 (30%), Positives = 317/603 (52%), Gaps = 74/603 (12%)
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
++EA+ +F+ +P + +T +I+G+ + R+ +++ F+ P ++V+SW + I G V+
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
G A+KLF ++ E V V+++++ C
Sbjct: 111 GDMNTAVKLFDEMPERSV----VSWTAMVNGC---------------------------- 138
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEV 282
+ G+VD A +F +M +D +W ++ +++ G + +A ++F +MP +N +
Sbjct: 139 -------FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVI 191
Query: 283 SWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHV 342
SW+ MI +Q+ EA LF+ M R K + F+ V++A A+ A G+ VH +
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI 251
Query: 343 LKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQME 402
+K+G + ++S +LI Y+ C D R VFD V + VA W +++ GY LN + E
Sbjct: 252 IKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVA---VWTALLSGYSLNKKHE 308
Query: 403 EAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASA 462
+A ++F+ ML + +PN+STF+S L + +
Sbjct: 309 DA-------------------------------LSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 463 SVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTV 522
++ +L+ GK++HG +KLG D F+G +L Y+ SG++ + VF ++ K+ +SW
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397
Query: 523 MVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEP-I 581
++ G A+ G K + +F +M + + P+E+T +L ACSH G ++KG K F M I
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGI 457
Query: 582 YNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAER 641
+I +HYTC+VD+L R G+L EAE+ I M +P+ W +LLS C+ + + E+
Sbjct: 458 NHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEK 517
Query: 642 AVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVH 701
A ++ L + A YVLLSNIYASAGRW + +R M + G+ K G SWV +R + H
Sbjct: 518 AAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKH 577
Query: 702 FFF 704
FF
Sbjct: 578 EFF 580
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/580 (27%), Positives = 248/580 (42%), Gaps = 132/580 (22%)
Query: 58 LTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERN 117
L T+++ Y S + ++A + ++ D+V N MI+ ++ G++ A +LFD MPER+
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 118 EVSWTALISG-------------------------------FMKHGRVEESMWYFERNPF 146
VSWTA+++G +++ G+V++++ F++ P
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG 187
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
+NVISWT ICG QN S EAL LF +L +K F+ + ACA F +G+ V
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
GLI K GF V SLIT + +R VFD V WT +L
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALL--------- 298
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSAL 326
+ Y+ + E+A +F M R S PN S F+ L++
Sbjct: 299 ----------------------SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSC 336
Query: 327 ASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVV 386
++L L G +H +K+G+E D F+ N+L+ +YS G D VF I +K +V
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKS---IV 393
Query: 387 SWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSG 446
SWNS II G +H + F +F +M+
Sbjct: 394 SWNS-------------------------------IIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 447 EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
+ P++ TF+ +L A + LEKG+ L Y SG R
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLF--------------------YYMSSGINHIDR 462
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
++ +T MV L G KE+ L E M + PNE+ L++L AC
Sbjct: 463 KI---------QHYTCMVDILGRCGKLKEAEELIERM---VVKPNEMVWLALLSACRMHS 510
Query: 567 LVDKGLKYFNSMEPIYNI-KPNGRHYTCVVDMLSRSGRLS 605
VD+G K + I+N+ + Y + ++ + +GR S
Sbjct: 511 DVDRGEK---AAAAIFNLDSKSSAAYVLLSNIYASAGRWS 547
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 110/532 (20%), Positives = 203/532 (38%), Gaps = 156/532 (29%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C++ + G +HG +IK G E Y++ L+ Y ++
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR-------------- 275
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
+ +++++FD WTAL+SG+ + + E
Sbjct: 276 -----------------IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHE---------- 308
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
+AL +F +L + + PN+ TF+S +C+ + G
Sbjct: 309 ---------------------DALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ G+ K G E V NSL+ + G V+ A SVF ++ K+ +VSW I+
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII-------- 399
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
+G A Q G + AF +F QM R + +P+ F+ +LSA
Sbjct: 400 VGCA-----------------------QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSA 436
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
+ H L+ G + ++S+ + + +++ + H
Sbjct: 437 CS-----------HCGFLEKGRKLFYYMSSGI------------------NHIDRKIQH- 466
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNM-PKRNDVSWSAIISGYLEHKQFD----LVFAVFN 440
+ M+ G G+++EA+EL + M K N++ W A++S H D A+FN
Sbjct: 467 --YTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFN 524
Query: 441 EMLLSGEIPNKSTFSSVLCAS--------ASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+ +KS+ + VL ++ ++V+ L +G + K G + V G
Sbjct: 525 -------LDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRG--- 574
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEME 544
SGD R+++++ E L E GYA + + ++E
Sbjct: 575 KKHEFFSGDQPHCSRIYEKLEFLRE--------KLKELGYAPDYRSALHDVE 618
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 41/215 (19%)
Query: 391 MIGGYGLNGQMEEAKEL-------------------------------FDNMPKRNDVSW 419
+I + L+ +++EA+E+ FD MP R+ VSW
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK 479
+++ISG +E + +F+EM P +S S + S GK + +
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCFRS---GKVDQAERLF 151
Query: 480 LGFPY-DVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESIN 538
P D ++ Y + G ++ + ++F +MP KN ISWT M+ GL ++ + E+++
Sbjct: 152 YQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALD 211
Query: 539 LFEEMEKTSITPNELTILSVLFACSHSGLVDKGLK 573
LF+ M + I V+ AC+++ G++
Sbjct: 212 LFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ 246
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/572 (31%), Positives = 301/572 (52%), Gaps = 39/572 (6%)
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV---KPNEVTFSSICKACAEINDF 200
NP N+ SW I GF ++ E+ L+ ++L G +P+ T+ + K CA++
Sbjct: 115 NP--NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
LG + G + K E V N+ I + F
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHM-------------------------------F 201
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
GD+ AR++FDE P R+ VSW+ +I Y + G E+A +++ M KP+
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMI 261
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
++S+ + L L G + +V + G+ + + NAL+D++SKCG+ + R +FD++ ++
Sbjct: 262 GLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
+ VSW +MI GY G ++ +++LFD+M +++ V W+A+I G ++ K+ A+F
Sbjct: 322 TI---VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 441 EMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSG 500
EM S P++ T L A + + +L+ G +H I K +V LGT+L D YAK G
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 501 DIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLF 560
+I + VF + +N +++T ++ GLA G A +I+ F EM I P+E+T + +L
Sbjct: 439 NISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498
Query: 561 ACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDS 620
AC H G++ G YF+ M+ +N+ P +HY+ +VD+L R+G L EA+ + SMP E D+
Sbjct: 499 ACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADA 558
Query: 621 NAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLM 680
W +LL GC+ + N ++ E+A K L +L YVLL +Y A W DA R++M
Sbjct: 559 AVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMM 618
Query: 681 TEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
E+G+ K GCS +EV V F + P+
Sbjct: 619 NERGVEKIPGCSSIEVNGIVCEFIVRDKSRPE 650
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 212/447 (47%), Gaps = 71/447 (15%)
Query: 89 VHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQN 148
VHN I+ G++E A+++FD P R+ VSW LI+G+ K G E++++ +
Sbjct: 193 VHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY------- 245
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLES-GVKPNEVTFSSICKACAEINDFRLGLSVF 207
KL+ES GVKP++VT + +C+ + D G +
Sbjct: 246 -------------------------KLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 208 GLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLG 267
+ + G + + N+L+ + K G++ AR +FD +EKR +VSWT ++ + G L
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 268 EARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALA 327
+R++FD+M E++ V W+ MI Q+ ++A LF++M + KP+ LSA +
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 328 SLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVS 387
L AL G+ +H ++ K + +V + +L+D+Y+KCG + VF I ++ ++
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN---SLT 457
Query: 388 WNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGE 447
+ ++IGG L+G A + FNEM+ +G
Sbjct: 458 YTAIIGGLALHGDASTA-------------------------------ISYFNEMIDAGI 486
Query: 448 IPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG--TALTDTYAKSGDIESS 505
P++ TF +L A ++ G+D + +K F + L + + D ++G +E +
Sbjct: 487 APDEITFIGLLSACCHGGMIQTGRDYFSQ-MKSRFNLNPQLKHYSIMVDLLGRAGLLEEA 545
Query: 506 RRVFDRMP-DKNEISWTVMVRGLAESG 531
R+ + MP + + W ++ G G
Sbjct: 546 DRLMESMPMEADAAVWGALLFGCRMHG 572
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 80/398 (20%)
Query: 255 VILDVF-----IEMGDLGEAR------RIFDEMPERNEVSWSVMIARYNQSGYPEEAFRL 303
+ILD F I L E+R +I + N SW+V I +++S P+E+F L
Sbjct: 81 LILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLL 140
Query: 304 FRQMTRYSF---KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
++QM R+ +P+ + ++ A L+ G + HVLK+ +E + NA I +
Sbjct: 141 YKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHM 200
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWS 420
++ CG+ ++ R VFD E V +VSWN +I GY G+ E+A
Sbjct: 201 FASCGDMENARKVFD---ESPVRDLVSWNCLINGYKKIGEAEKA---------------- 241
Query: 421 AIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKL 480
V+ M G P+ T ++ + + + L +GK+ + + +
Sbjct: 242 ---------------IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGY-------- 532
G + L AL D ++K GDI +RR+FD + + +SWT M+ G A G
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLF 346
Query: 533 -----------------------AKESINLFEEMEKTSITPNELTILSVLFACSHSGLVD 569
++++ LF+EM+ ++ P+E+T++ L ACS G +D
Sbjct: 347 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALD 406
Query: 570 KGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEA 607
G+ +E Y++ N T +VDM ++ G +SEA
Sbjct: 407 VGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEA 443
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 169/350 (48%), Gaps = 15/350 (4%)
Query: 74 EANEIVKDLNGFDLVVH--NCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKH 131
E E VK+ NG + + N +++ + G++ EA+R+FD + +R VSWT +ISG+ +
Sbjct: 278 EFYEYVKE-NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G ++ S F+ ++V+ W A I G VQ +AL LF ++ S KP+E+T
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 192 KACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVV 251
AC+++ +G+ + I K +V++ SL+ + K G + A SVF ++ R+ +
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL 456
Query: 252 SWTVILDVFIEMGDLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQM 307
++T I+ GD A F+EM + +E+++ +++ G + F QM
Sbjct: 457 TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM 516
Query: 308 -TRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKC 364
+R++ P +SI++ L R+G+ A L + +E D + AL+
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLG-----RAGLLEEADRLMESMPMEADAAVWGALLFGCRMH 571
Query: 365 GETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR 414
G + G ++E D + + + G YG E+AK M +R
Sbjct: 572 GNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNER 621
Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 471 KDLHGKIIKLGFPYDVFLGTALTD--TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLA 528
K + ++I G D F + L ++S ++ S ++ + + N SW V +RG +
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 529 ESGYAKESINLFEEMEKTSIT---PNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIK 585
ES KES L+++M + P+ T + C+ L G + + ++
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL-RLE 188
Query: 586 PNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKN 645
+ + M + G + A + P D +W L++G YK AE+A+
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVR-DLVSWNCLING---YKKIGEAEKAIY- 243
Query: 646 LWKLAE 651
++KL E
Sbjct: 244 VYKLME 249
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 338/666 (50%), Gaps = 97/666 (14%)
Query: 43 LHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGN 102
+HG LIKTGI K LTTR+++ + SR+ A+ F V + + +G
Sbjct: 31 IHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLAD--------FARCVFHEYHVCSFSFGE 82
Query: 103 LEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQN 162
+E+ W A+I HG+ +P Q
Sbjct: 83 VEDP------------FLWNAVIKSH-SHGK----------DPRQ--------------- 104
Query: 163 GFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVC 222
AL L +LE+GV ++ + S + KAC+ + + G+ + G + K G + +
Sbjct: 105 -----ALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQ 159
Query: 223 NSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPE--RN 280
N LI L LK G + L+R +FDRM KRD VS+ ++D +++ G + AR +FD MP +N
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 281 EVSWSVMIARYNQ-SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVH 339
+SW+ MI+ Y Q S + A +LF M
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMP------------------------------- 248
Query: 340 AHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNG 399
EKD+ N++ID Y K G +D + +FD + +DV V+W +MI GY G
Sbjct: 249 --------EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV---VTWATMIDGYAKLG 297
Query: 400 QMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVL 458
+ AK LFD MP R+ V+++++++GY+++K +F++M + P+ +T VL
Sbjct: 298 FVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 357
Query: 459 CASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEI 518
A A + L K D+H I++ F LG AL D Y+K G I+ + VF+ + +K+
Sbjct: 358 PAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID 417
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W M+ GLA G + + ++ ++E+ S+ P+++T + VL ACSHSGLV +GL F M
Sbjct: 418 HWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELM 477
Query: 579 EPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQI 638
+ I+P +HY C+VD+LSRSG + A++ I MP EP+ W + L+ C +K +
Sbjct: 478 RRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFET 537
Query: 639 AERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRN 698
E K+L A +P+ YVLLSN+YAS G W D VR +M E+ + K GCSW+E+
Sbjct: 538 GELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDG 597
Query: 699 QVHFFF 704
+VH FF
Sbjct: 598 RVHEFF 603
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 199/484 (41%), Gaps = 94/484 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+LK + V G +HG L KTG+ + +L L+ +YL + ++ + D
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 87 LVVHNCMINANIQWGNLEEAQRLFD----------------------------------G 112
V +N MI+ ++ G + A+ LFD
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 113 MPERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLF 172
MPE++ +SW ++I G++KHGR+E++ F+ P ++V++W I G+ + GF A LF
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 173 LKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSL-- 230
++ V V ++S+ + L +F + K E H+ ++ + + L
Sbjct: 307 DQMPHRDV----VAYNSMMAGYVQNKYHMEALEIFSDMEK---ESHLLPDDTTLVIVLPA 359
Query: 231 --KMGE----VDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSW 284
++G +D+ + ++ ++D++ + G + A +F+ + ++ W
Sbjct: 360 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 419
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLK 344
+ MI G E AF + Q+ R S KP+ F VL+A
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC------------------ 461
Query: 345 IGIEKDVFISNALIDLYSKCGETKDGRLVFDSI-----VEKDVAHVVSWNSMIGGYGLNG 399
S G K+G L F+ + +E + H + M+ +G
Sbjct: 462 -----------------SHSGLVKEGLLCFELMRRKHKIEPRLQH---YGCMVDILSRSG 501
Query: 400 QMEEAKELFDNMP-KRNDVSWSAIISGYLEHKQFDLVFAVFNEMLL-SGEIPNKSTFSSV 457
+E AK L + MP + NDV W ++ HK+F+ V ++L +G P+ S
Sbjct: 502 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 561
Query: 458 LCAS 461
+ AS
Sbjct: 562 MYAS 565
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 284/522 (54%), Gaps = 35/522 (6%)
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
N F+ ++C G + L+ +GF +CN L+++ K+G+ A +V+
Sbjct: 43 NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVY 102
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
RM K++ +S ++++ ++ GDL AR++FDEMP+R +W+ MIA Q + EE
Sbjct: 103 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 162
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
LFR+M F P+ V S A L+++ G +H + +K G+E D+ ++++L +Y
Sbjct: 163 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 222
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
+ G+ +DG +V S MP RN V+W+ +
Sbjct: 223 RNGKLQDGEIVIRS----------------------------------MPVRNLVAWNTL 248
Query: 423 ISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGF 482
I G ++ + V ++ M +SG PNK TF +VL + + +A +G+ +H + IK+G
Sbjct: 249 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 308
Query: 483 PYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEE 542
V + ++L Y+K G + + + F D++E+ W+ M+ G E+I LF
Sbjct: 309 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 368
Query: 543 M-EKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRS 601
M E+T++ NE+ L++L+ACSHSGL DKGL+ F+ M Y KP +HYTCVVD+L R+
Sbjct: 369 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 428
Query: 602 GRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLS 661
G L +AE I SMP + D W +LLS C +KN ++A+R K + ++ A YVLL+
Sbjct: 429 GCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLA 488
Query: 662 NIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
N++ASA RW D VRK M +K ++K G SW E + +VH F
Sbjct: 489 NVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQF 530
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 137/572 (23%), Positives = 241/572 (42%), Gaps = 113/572 (19%)
Query: 2 KASLRSLF-----SINPETS-FNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKE 55
K +LR F +I TS F +I++C T++ + G+ LH L+ +G +
Sbjct: 26 KGNLREAFQRFRLNIFTNTSLFTPFIQSC-------TTRQSLPSGKQLHCLLVVSGFSSD 78
Query: 56 RYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPE 115
+++ L+ MY + G+ A ++ M +
Sbjct: 79 KFICNHLMSMY-------------------------------SKLGDFPSAVAVYGRMRK 107
Query: 116 RNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKL 175
+N +S LI+G+++ G + + F+ P + + +W A I G +Q F+ E L LF ++
Sbjct: 108 KNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM 167
Query: 176 LESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEV 235
G P+E T S+ A + +G + G K G E + V +SL + ++ G++
Sbjct: 168 HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKL 227
Query: 236 DLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSG 295
V M R++V+W ++ +G A Q+G
Sbjct: 228 QDGEIVIRSMPVRNLVAWNTLI--------MGNA-----------------------QNG 256
Query: 296 YPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISN 355
PE L++ M +PN F VLS+ + L G +HA +KIG V + +
Sbjct: 257 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 316
Query: 356 ALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRN 415
+LI +YSKCG D F E++ V W+SMI YG +GQ +EA ELF+ M ++
Sbjct: 317 SLISMYSKCGCLGDAAKAFS---EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 373
Query: 416 DVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHG 475
++ EI N+ F ++L A + +KG +L
Sbjct: 374 NM-----------------------------EI-NEVAFLNLLYACSHSGLKDKGLELFD 403
Query: 476 KII-KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEIS-WTVMVRGLAESGYA 533
++ K GF + T + D ++G ++ + + MP K +I W ++ A
Sbjct: 404 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 463
Query: 534 KESINLFEEMEKTSITPNELTILSVLFACSHS 565
+ + +F+E+ I PN+ + VL A H+
Sbjct: 464 EMAQRVFKEI--LQIDPND-SACYVLLANVHA 492
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/674 (30%), Positives = 343/674 (50%), Gaps = 85/674 (12%)
Query: 25 LCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNG 84
LCL I+S Q R L L K G LT + I+ S ++EI
Sbjct: 16 LCLTPSISSSAPTKQSRILE--LCKLG-----QLTEAIRIL-----NSTHSSEIPATPKL 63
Query: 85 FDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGR-VEESMWYFER 143
+ ++ C + G A + G+ V +L+S + K G + E+ F+
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG-NSLLSLYFKLGPGMRETRRVFDG 122
Query: 144 NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLG 203
++ ISWT+ + G+V +AL++F++++ G+ NE T SS KAC+E+ + RLG
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 204 LSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM 263
G++ GFE + + ++L L + R D
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYL------YGVNREPVD-------------------- 216
Query: 264 GDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIV 322
ARR+FDEMPE + + W+ +++ ++++ EEA LF M R P+ S F V
Sbjct: 217 -----ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L+A +L+ L+ G +H ++ GI +V + ++L+D+Y KC
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC------------------ 313
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
G + EA+++F+ M K+N VSWSA++ GY ++ + + +F EM
Sbjct: 314 ----------------GSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
E + F +VL A A +A++ GK++HG+ ++ G +V + +AL D Y KSG I
Sbjct: 358 ----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCI 413
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+S+ RV+ +M +N I+W M+ LA++G +E+++ F +M K I P+ ++ +++L AC
Sbjct: 414 DSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTAC 473
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
H+G+VD+G YF M Y IKP HY+C++D+L R+G EAE+ + D++
Sbjct: 474 GHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASL 533
Query: 623 WASLLSGCKTYKN-EQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W LL C + ++AER K + +L ++ YVLLSN+Y + GR DA+N+RKLM
Sbjct: 534 WGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMV 593
Query: 682 EKGLRKSGGCSWVE 695
+G+ K+ G SW++
Sbjct: 594 RRGVAKTVGQSWID 607
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 326 bits (835), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 210/744 (28%), Positives = 368/744 (49%), Gaps = 117/744 (15%)
Query: 11 INPET-SFNSYIETCLCLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGS 69
++P+ +F S I+ C L D +LV + ++ G + ++ L+ MY S
Sbjct: 102 VSPDKYTFPSVIKACAGLF-DAEMGDLVYE------QILDMGFESDLFVGNALVDMY--S 152
Query: 70 RKSL--EANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGM------PERNEVS- 120
R L A ++ ++ DLV N +I+ G EEA ++ + P+ VS
Sbjct: 153 RMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSS 212
Query: 121 --------------------------------WTALISGFMKHGRVEESMWYFERNPFQN 148
L++ ++K R ++ F+ ++
Sbjct: 213 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 272
Query: 149 VISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFG 208
+S+ ICG+++ E++++FL+ L+ KP+ +T SS+ +AC + D L ++
Sbjct: 273 SVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYN 331
Query: 209 LIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGE 268
+ KAGF +V N +++DV+ + GD+
Sbjct: 332 YMLKAGFVLESTVRN-------------------------------ILIDVYAKCGDMIT 360
Query: 269 ARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALAS 328
AR +F+ M ++ VSW+ +I+ Y QSG EA +LF+ M + + + +++S
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 329 LKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSW 388
L L+ G +H++ +K GI D+ +SNALID+Y+KCGE V DS+
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE------VGDSL----------- 463
Query: 389 NSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI 448
++F +M + V+W+ +IS + F V +M S +
Sbjct: 464 -----------------KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 449 PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRV 508
P+ +TF L AS+A+ GK++H +++ G+ ++ +G AL + Y+K G +E+S RV
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 509 FDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLV 568
F+RM ++ ++WT M+ G ++++ F +MEK+ I P+ + +++++ACSHSGLV
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLV 626
Query: 569 DKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLS 628
D+GL F M+ Y I P HY CVVD+LSRS ++S+AE+FI +MP +PD++ WAS+L
Sbjct: 627 DEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLR 686
Query: 629 GCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKS 688
C+T + + AER + + +L + P +L SN YA+ +W +RK + +K + K+
Sbjct: 687 ACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKN 746
Query: 689 GGCSWVEVRNQVHFFFQKTDHNPK 712
G SW+EV VH F D P+
Sbjct: 747 PGYSWIEVGKNVHVFSSGDDSAPQ 770
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 216/497 (43%), Gaps = 104/497 (20%)
Query: 137 SMWYFER-NPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACA 195
S+ F R +P +NV W + I F +NG EAL+ + KL ES V P++ TF S+ KACA
Sbjct: 58 SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA 117
Query: 196 EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTV 255
+ D +G V+ I GFE + V N+L+ + +MG + AR VFD M RD+VSW
Sbjct: 118 GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS 177
Query: 256 ILDVFIEMGDLGEARRIFDEM------PERNEVS-------------------------- 283
++ + G EA I+ E+ P+ VS
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG 237
Query: 284 -------WSVMIARYNQSGYPEEAFRLFRQM-TRYS------------------------ 311
+ ++A Y + P +A R+F +M R S
Sbjct: 238 VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFL 297
Query: 312 -----FKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGE 366
FKP+ S VL A L+ L +++ ++LK G + + N LID+Y+KCG+
Sbjct: 298 ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 367 TKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGY 426
R VF+S+ KD VSWNS+I GY +G + EA +L
Sbjct: 358 MITARDVFNSMECKD---TVSWNSIISGYIQSGDLMEAMKL------------------- 395
Query: 427 LEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDV 486
F M++ E + T+ ++ S +A L+ GK LH IK G D+
Sbjct: 396 ------------FKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443
Query: 487 FLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKT 546
+ AL D YAK G++ S ++F M + ++W ++ G + + +M K+
Sbjct: 444 SVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
Query: 547 SITPNELTILSVLFACS 563
+ P+ T L L C+
Sbjct: 504 EVVPDMATFLVTLPMCA 520
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 36/253 (14%)
Query: 319 FSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIV 378
S LS+ ++L LR +HA V+ +G++ F S LID YS E VF +
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 379 EKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAV 438
P +N W++II + ++ F
Sbjct: 67 ---------------------------------PAKNVYLWNSIIRAFSKNGLFPEALEF 93
Query: 439 FNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ ++ S P+K TF SV+ A A + E G ++ +I+ +GF D+F+G AL D Y++
Sbjct: 94 YGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSR 153
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSV 558
G + +R+VFD MP ++ +SW ++ G + GY +E++ ++ E++ + I P+ T+ SV
Sbjct: 154 MGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213
Query: 559 LFACSHSGLVDKG 571
L A + +V +G
Sbjct: 214 LPAFGNLLVVKQG 226
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 460 ASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRM-PDKNEI 518
A +S ++L + + +H +I LG F L D Y+ + SS VF R+ P KN
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 519 SWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSM 578
W ++R +++G E++ + ++ ++ ++P++ T SV+ AC+ GL D +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA--GLFDAEMGDL-VY 129
Query: 579 EPIYNIKPNGRHYT--CVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNE 636
E I ++ + +VDM SR G L+ A + MP D +W SL+SG Y +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISG---YSSH 185
Query: 637 QIAERA------VKNLWKLAEEHPAGYVL 659
E A +KN W + + VL
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVL 214
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 325 bits (834), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 276/461 (59%), Gaps = 10/461 (2%)
Query: 256 ILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYS-FKP 314
+++V+ + G A ++FDEMP R+ ++W+ ++ NQ+ + +F + S +P
Sbjct: 44 LVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
+ FS ++ A A+L ++ G VH H + D + ++L+D+Y+KCG + VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
DSI V + +SW +M+ GY +G+ EEA ELF +P +N SW+A+ISG+++ +
Sbjct: 164 DSI---RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 435 VFAVFNEMLLSG-EIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALT 493
F+VF EM +I + SS++ A A++A+ G+ +HG +I LGF VF+ AL
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 494 DTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNEL 553
D YAK D+ +++ +F RM ++ +SWT ++ G+A+ G A++++ L+++M + PNE+
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 554 TILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINS 613
T + +++ACSH G V+KG + F SM Y I+P+ +HYTC++D+L RSG L EAE+ I++
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 614 MPFEPDSNAWASLLSGCKTYKNEQIAERAVKNL---WKLAEEHPAGYVLLSNIYASAGRW 670
MPF PD WA+LLS CK Q+ R +L +KL + P+ Y+LLSNIYASA W
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKD--PSTYILLSNIYASASLW 458
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
R+ + E +RK G S VEVR + F+ +P
Sbjct: 459 GKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHP 499
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 220/463 (47%), Gaps = 41/463 (8%)
Query: 124 LISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG-VKP 182
L++ + K G ++ F+ P ++ I+W + + Q S + L +F + S ++P
Sbjct: 44 LVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
++ FS++ KACA + G V + + V +SL+ + K G ++ A++VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
D + ++ +SWT ++ + + G EA +F +P +N SW+ +I+ + QSG EAF
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 303 LFRQMTRYSFKP-NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLY 361
+F +M R + S ++ A A+L A +G VH V+ +G + VFISNALID+Y
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 362 SKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSA 421
+KC + + +F + +D VVSW S+I G +GQ E+A
Sbjct: 284 AKCSDVIAAKDIFSRMRHRD---VVSWTSLIVGMAQHGQAEKA----------------- 323
Query: 422 IISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIK-L 480
A++++M+ G PN+ TF ++ A + V +EKG++L + K
Sbjct: 324 --------------LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 481 GFPYDVFLGTALTDTYAKSGDIESSRRVFDRMP-DKNEISWTVMVRGLAESGYAKESINL 539
G + T L D +SG ++ + + MP +E +W ++ G + I +
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 540 FEEMEKT--SITPNELTILSVLFA-CSHSGLVDKGLKYFNSME 579
+ + + P+ +LS ++A S G V + + ME
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 175/349 (50%), Gaps = 17/349 (4%)
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D VV + +++ + G L A+ +FD + +N +SWTA++SG+ K GR EE++ F P
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP-NEVTFSSICKACAEINDFRLGL 204
+N+ SWTA I GFVQ+G EA +F ++ V + + SSI ACA + G
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 205 SVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMG 264
V GL+ GF+ V + N+LI + K +V A+ +F RM RDVVSWT ++ + G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 265 DLGEARRIFDEMPER----NEVSWSVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCF 319
+A ++D+M NEV++ +I + G+ E+ LF+ MT+ Y +P+ +
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 320 SIVLSALASLKALRSGMHVHAHVL--KIGIEKDVFISNALIDLYSKCGETKDGRLVFDSI 377
+ +L L RSG+ A L + D AL+ + G + G + D +
Sbjct: 379 TCLLDLLG-----RSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Query: 378 VE----KDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAI 422
V KD + + +++ L G++ EA+ M R D S++
Sbjct: 434 VSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 61/232 (26%)
Query: 323 LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
L A + L + +HAH++K+GI + ++N L+++Y KCG VF
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVF-------- 61
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
D MP R+ ++W+++++ N+
Sbjct: 62 --------------------------DEMPHRDHIAWASVLTA-------------LNQA 82
Query: 443 LLSGEI--------------PNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFL 488
LSG+ P+ FS+++ A A++ S++ G+ +H I + D +
Sbjct: 83 NLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVV 142
Query: 489 GTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLF 540
++L D YAK G + S++ VFD + KN ISWT MV G A+SG +E++ LF
Sbjct: 143 KSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 458 LCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNE 517
LCA +L K LH I+KLG L L + Y K G + +VFD MP ++
Sbjct: 12 LCARNR--TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 518 ISWTVMVRGLAESGYAKESI-NLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFN 576
I+W ++ L ++ + +++ + + P++ +++ AC++ G +D G + +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG-RQVH 128
Query: 577 SMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSG-CKTYKN 635
+ + + +VDM ++ G L+ A+ +S+ + ++ +W +++SG K+ +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGRK 187
Query: 636 EQIAE----RAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
E+ E VKNL+ + L + + +G+ ++A +V
Sbjct: 188 EEALELFRILPVKNLY--------SWTALISGFVQSGKGLEAFSV 224
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 124/309 (40%), Gaps = 66/309 (21%)
Query: 38 IQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINAN 97
I GR +HG +I G +++ L+ MY + A +I + D+V +I
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314
Query: 98 IQWGNLEEAQRLFDGMPER----NEVSWTALI-----SGFMKHGR-VEESMW--YFERNP 145
Q G E+A L+D M NEV++ LI GF++ GR + +SM Y R
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
Q+ +T + ++G EA L + P+E T++++ AC ++G+
Sbjct: 375 LQH---YTCLLDLLGRSGLLDEAENLIHTM---PFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEM-- 263
+ A + + +D ++ ++ +++
Sbjct: 429 I-------------------------------ADHLVSSFKLKDPSTYILLSNIYASASL 457
Query: 264 -GDLGEARRIFDEMPERNEVSWSVMIAR-------YNQSGYP--EEAFRLFRQM-----T 308
G + EARR EM R + S + R ++ +P E+ FRL +++
Sbjct: 458 WGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRI 517
Query: 309 RYSFKPNTS 317
R + P+TS
Sbjct: 518 RNGYVPDTS 526
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 298/573 (52%), Gaps = 35/573 (6%)
Query: 132 GRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSIC 191
G V + F + P +V+ W I G+ + E ++L+L +L+ GV P+ TF +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 192 KACA-EINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDV 250
+ G + + K G ++ V N+L+ + G +D+AR VFDR K DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 251 VSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRY 310
S W++MI+ YN+ EE+ L +M R
Sbjct: 202 FS-------------------------------WNLMISGYNRMKEYEESIELLVEMERN 230
Query: 311 SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDG 370
P + +VLSA + +K VH +V + E + + NAL++ Y+ CGE
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIA 290
Query: 371 RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHK 430
+F S+ +DV +SW S++ GY G ++ A+ FD MP R+ +SW+ +I GYL
Sbjct: 291 VRIFRSMKARDV---ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 431 QFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGT 490
F+ +F EM +G IP++ T SVL A A + SLE G+ + I K DV +G
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 491 ALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITP 550
AL D Y K G E +++VF M +++ +WT MV GLA +G +E+I +F +M+ SI P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 551 NELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDF 610
+++T L VL AC+HSG+VD+ K+F M + I+P+ HY C+VDML R+G + EA +
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 611 INSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRW 670
+ MP P+S W +LL + + +E +AE A K + +L ++ A Y LL NIYA RW
Sbjct: 528 LRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRW 587
Query: 671 IDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
D VR+ + + ++K+ G S +EV H F
Sbjct: 588 KDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 171/324 (52%), Gaps = 7/324 (2%)
Query: 123 ALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKP 182
AL+ + G ++ + F+R ++V SW I G+ + E+++L +++ + V P
Sbjct: 175 ALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSP 234
Query: 183 NEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVF 242
VT + AC+++ D L V + + E + + N+L+ GE+D+A +F
Sbjct: 235 TSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIF 294
Query: 243 DRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFR 302
M+ RDV+SWT I+ ++E G+L AR FD+MP R+ +SW++MI Y ++G E+
Sbjct: 295 RSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLE 354
Query: 303 LFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYS 362
+FR+M P+ VL+A A L +L G + ++ K I+ DV + NALID+Y
Sbjct: 355 IFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 363 KCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMP----KRNDVS 418
KCG ++ + VF + ++D +W +M+ G NGQ +EA ++F M + +D++
Sbjct: 415 KCGCSEKAQKVFHDMDQRD---KFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 419 WSAIISGYLEHKQFDLVFAVFNEM 442
+ ++S D F +M
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKM 495
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 158/297 (53%), Gaps = 18/297 (6%)
Query: 29 KDITSQNLVIQG---RALHGHLIKTGIHKERYL---TTRLLIMYLGSRKSLEANEIVKDL 82
+D+ S NL+I G + I+ + ER L T+ L++ L + ++ ++ K +
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 83 NGF--------DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRV 134
+ + L + N ++NA G ++ A R+F M R+ +SWT+++ G+++ G +
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 135 EESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKAC 194
+ + YF++ P ++ ISWT I G+++ G E+L++F ++ +G+ P+E T S+ AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 195 AEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWT 254
A + +G + I K + V V N+LI + K G + A+ VF M++RD +WT
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 255 VILDVFIEMGDLGEARRIFDEMP----ERNEVSWSVMIARYNQSGYPEEAFRLFRQM 307
++ G EA ++F +M + +++++ +++ N SG ++A + F +M
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 208/689 (30%), Positives = 327/689 (47%), Gaps = 131/689 (19%)
Query: 27 LLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFD 86
+L+ T + L QG +H +L+K+G +G +
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSG-------------------------------SGLN 40
Query: 87 LVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNPF 146
L+ N +I+ + A ++FD MPERN VSW+AL+SG + +G ++ S
Sbjct: 41 LITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS--------- 91
Query: 147 QNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSV 206
L LF ++ G+ PNE TFS+ KAC +N GL +
Sbjct: 92 ----------------------LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 207 FGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDL 266
G K GFE V V NSL+ + K G ++ A VF R+ R ++SW
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW------------- 176
Query: 267 GEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFK--PNTSCFSIVLS 324
+ MIA + +GY +A F M + K P+ + +L
Sbjct: 177 ------------------NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 325 ALASLKALRSGMHVHAHVLKIGIE--KDVFISNALIDLYSKCGETKDGRLVFDSIVEKDV 382
A +S + +G +H +++ G I+ +L+DLY KCG R FD I EK
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT- 277
Query: 383 AHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEM 442
++SW+S+I GY G+ EA LF + + N Q D FA+
Sbjct: 278 --MISWSSLILGYAQEGEFVEAMGLFKRLQELNS--------------QID-SFAL---- 316
Query: 443 LLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDI 502
SS++ A A L +GK + +KL + + ++ D Y K G +
Sbjct: 317 ------------SSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 503 ESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFAC 562
+ + + F M K+ ISWTV++ G + G K+S+ +F EM + +I P+E+ L+VL AC
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 563 SHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNA 622
SHSG++ +G + F+ + + IKP HY CVVD+L R+GRL EA+ I++MP +P+
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 623 WASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMTE 682
W +LLS C+ + + ++ + K L ++ ++PA YV++SN+Y AG W + N R+L
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 683 KGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
KGL+K G SWVE+ +VHFF D +P
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSHP 573
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 33/250 (13%)
Query: 448 IPN-KSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSR 506
IPN + S+L ++G +H ++K G ++ L D Y K + +
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 507 RVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSHSG 566
+VFD MP++N +SW+ ++ G +G K S++LF EM + I PNE T + L AC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 567 LVDKGLKY--------FNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEP 618
++KGL+ F M + N +VDM S+ GR++EAE + +
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGN---------SLVDMYSKCGRINEAEKVFRRI-VDR 171
Query: 619 DSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE----EHPAGYVLLSNIYAS-------A 667
+W ++++G + + +A+ + E E P + L S + A A
Sbjct: 172 SLISWNAMIAG---FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 228
Query: 668 GRWIDAMNVR 677
G+ I VR
Sbjct: 229 GKQIHGFLVR 238
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 264/458 (57%), Gaps = 39/458 (8%)
Query: 255 VILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKP 314
V+++++++ L +A ++FD+MP+RN +SW+ MI+ Y++ ++A L M R + +P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 315 NTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVF 374
N +S VL + + +R +H ++K G+E DVF+ +ALID+++K GE +D
Sbjct: 161 NVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED----- 212
Query: 375 DSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDL 434
A +FD M + + W++II G+ ++ + D+
Sbjct: 213 -----------------------------ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243
Query: 435 VFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTD 494
+F M +G I ++T +SVL A +A LE G H I+K + D+ L AL D
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVD 301
Query: 495 TYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELT 554
Y K G +E + RVF++M +++ I+W+ M+ GLA++GY++E++ LFE M+ + PN +T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 555 ILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSM 614
I+ VLFACSH+GL++ G YF SM+ +Y I P HY C++D+L ++G+L +A +N M
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421
Query: 615 PFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAM 674
EPD+ W +LL C+ +N +AE A K + L E Y LLSNIYA++ +W
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481
Query: 675 NVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNPK 712
+R M ++G++K GCSW+EV Q+H F + +P+
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQ 519
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 79/417 (18%)
Query: 56 RYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDG-MP 114
R R L + + SL+++ + D + ++ C+ N + GNL F+G P
Sbjct: 35 RLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP 94
Query: 115 ERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLK 174
V+ LI+ ++K + ++ F++ P +NVISWT I + + +AL+L +
Sbjct: 95 MMFLVN--VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVL 152
Query: 175 LLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGE 234
+L V+PN T+SS+ ++C ++D R+ + I K G E V V ++LI + K+GE
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 235 -------------------------------VDLARSVFDRMEK---------------- 247
D+A +F RM++
Sbjct: 210 PEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA 269
Query: 248 ---------------------RDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSV 286
+D++ ++D++ + G L +A R+F++M ER+ ++WS
Sbjct: 270 CTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 287 MIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKI- 345
MI+ Q+GY +EA +LF +M KPN VL A + L G + + K+
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 346 GIEKDVFISNALIDLYSKCGETKDG-RLVFDSIVEKDVAHVVSWNSMIGGYGLNGQM 401
GI+ +IDL K G+ D +L+ + E D V+W +++G + M
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD---AVTWRTLLGACRVQRNM 443
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 44/269 (16%)
Query: 450 NKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVF 509
+ +T+S ++ S ++ +G + + G +FL L + Y K + + ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 510 DRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACS------ 563
D+MP +N ISWT M+ ++ ++++ L M + ++ PN T SVL +C+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 564 --HSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSN 621
H G++ +GL E ++ + ++D+ ++ G +A + M D+
Sbjct: 180 MLHCGIIKEGL------ESDVFVR------SALIDVFAKLGEPEDALSVFDEM-VTGDAI 226
Query: 622 AWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNVRKLMT 681
W S++ G +A K + + AG++ S
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKR------AGFIAEQATLTSV-------------- 266
Query: 682 EKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
LR G + +E+ Q H K D +
Sbjct: 267 ---LRACTGLALLELGMQAHVHIVKYDQD 292
>sp|O64766|PP185_ARATH Pentatricopeptide repeat-containing protein At2g35030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2
SV=1
Length = 627
Score = 322 bits (826), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 323/602 (53%), Gaps = 54/602 (8%)
Query: 114 PERNEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFL 173
P + W LI K G++ E+ F+ P ++V++WT I G+++ G EA +LF
Sbjct: 44 PRVPQPEW--LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD 101
Query: 174 KLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMG 233
++ + N VT++++ LS+ ++F+ E++V N++I + G
Sbjct: 102 RV---DSRKNVVTWTAMVSGYLRSKQ----LSIAEMLFQEMPERNVVSWNTMIDGYAQSG 154
Query: 234 EVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ 293
+D A +FD M +R++VSW ++ ++ G + EA +F+ MP R+ VSW+ M+ +
Sbjct: 155 RIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAK 214
Query: 294 SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFI 353
+G +EA RLF M E+++
Sbjct: 215 NGKVDEARRLFDCMP---------------------------------------ERNIIS 235
Query: 354 SNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
NA+I Y++ + +F + E+D A SWN+MI G+ N +M +A LFD MP+
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPERDFA---SWNTMITGFIRNREMNKACGLFDRMPE 292
Query: 414 RNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEI-PNKSTFSSVLCASASVASLEKGKD 472
+N +SW+ +I+GY+E+K+ + VF++ML G + PN T+ S+L A + +A L +G+
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 473 LHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDR--MPDKNEISWTVMVRGLAES 530
+H I K + + +AL + Y+KSG++ ++R++FD + ++ ISW M+ A
Sbjct: 353 IHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Query: 531 GYAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRH 590
G+ KE+I ++ +M K P+ +T L++LFACSH+GLV+KG+++F + ++ H
Sbjct: 413 GHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEH 472
Query: 591 YTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLA 650
YTC+VD+ R+GRL + +FIN + + ++LS C + IA+ VK + +
Sbjct: 473 YTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG 532
Query: 651 EEHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHN 710
+ YVL+SNIYA+ G+ +A +R M EKGL+K GCSWV+V Q H F +
Sbjct: 533 SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSH 592
Query: 711 PK 712
P+
Sbjct: 593 PQ 594
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 188/357 (52%), Gaps = 45/357 (12%)
Query: 60 TRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQWGNLEEAQRLFDGMPERNEV 119
T ++ YL S++ A + +++ ++V N MI+ Q G +++A LFD MPERN V
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 120 SWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESG 179
SW +++ ++ GR++E+M FER P ++V+SWTA + G +NG EA +LF
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF------- 225
Query: 180 VKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLAR 239
C E+++ N++IT + +D A
Sbjct: 226 -------------DCMP-------------------ERNIISWNAMITGYAQNNRIDEAD 253
Query: 240 SVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEE 299
+F M +RD SW ++ FI ++ +A +FD MPE+N +SW+ MI Y ++ EE
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 300 AFRLFRQMTRY-SFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALI 358
A +F +M R S KPN + +LSA + L L G +H + K +K+ +++AL+
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 359 DLYSKCGETKDGRLVFDS--IVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPK 413
++YSK GE R +FD+ + ++D ++SWNSMI Y +G +EA E+++ M K
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRD---LISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 215/712 (30%), Positives = 345/712 (48%), Gaps = 108/712 (15%)
Query: 37 VIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINA 96
V+ G+ HGH+IK+ ++ YL LL MY R+ A ++ + +++ N +I+
Sbjct: 63 VVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISG 122
Query: 97 NIQWGNLEEAQRLF----------------------------------DGMPERNEVSW- 121
Q G E+A LF G+ N +S
Sbjct: 123 YTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ 182
Query: 122 ----TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLE 177
LI + K G+++++M F+R ++ +SW + I G+V+ G + E L L K+
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 178 SGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGF-EKHVSVCNSLITLSLKMGEVD 236
G+ S+ KAC IN GF EK +++ T L M
Sbjct: 243 DGLNLTTYALGSVLKACC-IN------------LNEGFIEKGMAI--HCYTAKLGM---- 283
Query: 237 LARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQ--- 293
+ D+V T +LD++ + G L EA ++F MP +N V+++ MI+ + Q
Sbjct: 284 ----------EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 294 --SGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDV 351
EAF+LF M R +P+ S FS+VL A ++ K L G +HA + K + D
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393
Query: 352 FISNALIDLYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNM 411
FI +ALI+LY+ L G E+ + F +
Sbjct: 394 FIGSALIELYA----------------------------------LMGSTEDGMQCFAST 419
Query: 412 PKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGK 471
K++ SW+++I +++++Q + F +F ++ S P + T S ++ A A A+L G+
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 472 DLHGKIIKLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESG 531
+ G IK G + T+ YAKSG++ + +VF + + + +++ M+ LA+ G
Sbjct: 480 QIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHG 539
Query: 532 YAKESINLFEEMEKTSITPNELTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHY 591
A E++N+FE M+ I PN+ L VL AC H GLV +GLKYF M+ Y I PN +H+
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHF 599
Query: 592 TCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAE 651
TC+VD+L R+GRLS+AE+ I S F+ W +LLS C+ YK+ I +R + L +L
Sbjct: 600 TCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEP 659
Query: 652 EHPAGYVLLSNIYASAGRWIDAMNVRKLMTEKGLRKSGGCSWVEVRNQVHFF 703
E YVLL NIY +G A VR+LM ++G++K SW+ + NQ H F
Sbjct: 660 EASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSF 711
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 184/452 (40%), Gaps = 61/452 (13%)
Query: 33 SQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNC 92
++ + +G A+H + K G+ + + T LL MY + EA ++ + ++V +N
Sbjct: 264 NEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNA 323
Query: 93 MINANIQWGNL-----EEAQRLFDGMPER------------------------------- 116
MI+ +Q + EA +LF M R
Sbjct: 324 MISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHAL 383
Query: 117 --------NEVSWTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEA 168
+E +ALI + G E+ M F Q++ SWT+ I VQN A
Sbjct: 384 ICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESA 443
Query: 169 LKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITL 228
LF +L S ++P E T S + ACA+ G + G K+G + SV S I++
Sbjct: 444 FDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISM 503
Query: 229 SLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPER----NEVSW 284
K G + LA VF ++ DV +++ ++ + G EA IF+ M N+ ++
Sbjct: 504 YAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAF 563
Query: 285 SVMIARYNQSGYPEEAFRLFRQMTR-YSFKPNTSCFSIVLSALASLKALRSGMHVHAHVL 343
++ G + + F+ M Y PN F+ ++ L L ++ +L
Sbjct: 564 LGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL---IL 620
Query: 344 KIGIEKDVFISNALIDLYSKCGETKD---GRLVFDSIVEKDVAHVVSW---NSMIGGYGL 397
G + AL+ S C KD G+ V + ++E + S+ +++ G+
Sbjct: 621 SSGFQDHPVTWRALL---SSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGV 677
Query: 398 NGQMEEAKELFDNMPKRNDVSWSAIISGYLEH 429
N EE +EL + + + + S I+ G H
Sbjct: 678 NSSAEEVRELMRDRGVKKEPALSWIVIGNQTH 709
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 294/579 (50%), Gaps = 65/579 (11%)
Query: 133 RVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICK 192
+ + S F F N+ + + I GFV N E L LFL + + G+ + TF + K
Sbjct: 60 QTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLK 119
Query: 193 ACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVS 252
AC + +LG+ + L+ K GF DV +
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGF-------------------------------NHDVAA 148
Query: 253 WTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSF 312
T +L ++ G L +A ++FDE+P+R+ V+W+ + + Y SG EA LF++M
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 313 KPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRL 372
KP++ VLSA + L SG + ++ ++ ++K+ F+ L++LY+KCG+ + R
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 373 VFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQF 432
VFDS+VEKD +V+W++MI GY N +E ELF M + N L+ QF
Sbjct: 269 VFDSMVEKD---IVTWSTMIQGYASNSFPKEGIELFLQMLQEN-----------LKPDQF 314
Query: 433 DLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTAL 492
+V L + AS+ +L+ G+ I + F ++F+ AL
Sbjct: 315 SIV--------------------GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 493 TDTYAKSGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNE 552
D YAK G + VF M +K+ + + GLA++G+ K S +F + EK I+P+
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 553 LTILSVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFIN 612
T L +L C H+GL+ GL++FN++ +Y +K HY C+VD+ R+G L +A I
Sbjct: 415 STFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474
Query: 613 SMPFEPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWID 672
MP P++ W +LLSGC+ K+ Q+AE +K L L + YV LSNIY+ GRW +
Sbjct: 475 DMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDE 534
Query: 673 AMNVRKLMTEKGLRKSGGCSWVEVRNQVHFFFQKTDHNP 711
A VR +M +KG++K G SW+E+ +VH F +P
Sbjct: 535 AAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHP 573
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 183/409 (44%), Gaps = 71/409 (17%)
Query: 122 TALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVK 181
T+L+S + GR+ ++ F+ P ++V++WTA G+ +G EA+ LF K++E GVK
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 182 PNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSV 241
P+ + AC + D G + + + +K+ V +L+ L K G+++ ARSV
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 242 FDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAF 301
FD M ++D+V +WS MI Y + +P+E
Sbjct: 270 FDSMVEKDIV-------------------------------TWSTMIQGYASNSFPKEGI 298
Query: 302 RLFRQMTRYSFKPNTSCFSIV--LSALASLKALRSGMHVHAHVLKIGIEKDVFISNALID 359
LF QM + + KP+ FSIV LS+ ASL AL G + + + ++F++NALID
Sbjct: 299 ELFLQMLQENLKPDQ--FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 360 LYSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSW 419
+Y+KCG G VF + EKD +V N+ I G NG ++
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKD---IVIMNAAISGLAKNGHVK----------------- 396
Query: 420 SAIISGYLEHKQFDLVFAVFNEMLLSGEIPNKSTFSSVLCASASVASLEKGKDLHGKI-I 478
L FAVF + G P+ STF +LC ++ G I
Sbjct: 397 --------------LSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 479 KLGFPYDVFLGTALTDTYAKSGDIESSRRVFDRMPDK-NEISWTVMVRG 526
V + D + ++G ++ + R+ MP + N I W ++ G
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 177/444 (39%), Gaps = 104/444 (23%)
Query: 40 GRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGFDLVVHNCMINANIQ 99
G LH ++K G + + T LL +Y GS + +A+++ ++ +V + +
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 100 WGNLEEAQRLFDGMPE---------------------------------------RNEVS 120
G EA LF M E +N
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 121 WTALISGFMKHGRVEESMWYFERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGV 180
T L++ + K G++E++ F+ +++++W+ I G+ N F E ++LFL++L+ +
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 181 KPNEVTFSSICKACAEINDFRLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARS 240
KP++ + +CA + LG LI + F ++ + N+LI + K G +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369
Query: 241 VFDRMEKRDVVSWTVILDVFIEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEA 300
VF M+++D+ V + I+ ++G+ + +
Sbjct: 370 VFKEMKEKDI-------------------------------VIMNAAISGLAKNGHVKLS 398
Query: 301 FRLFRQMTRYSFKPNTSCFSIVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDL 360
F +F Q + P+ S F +L VHA +++ G+ NA+ +
Sbjct: 399 FAVFGQTEKLGISPDGSTFLGLLCGC-----------VHAGLIQDGLR----FFNAISCV 443
Query: 361 YSKCGETKDGRLVFDSIVEKDVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKR-NDVSW 419
Y+ +++ V H + M+ +G G +++A L +MP R N + W
Sbjct: 444 YA---------------LKRTVEH---YGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 420 SAIISGYLEHKQFDLVFAVFNEML 443
A++SG K L V E++
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELI 509
Score = 40.0 bits (92), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 16/234 (6%)
Query: 445 SGEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAKSGDIES 504
+ ++ T SV C ++ K +H +I +D FL L +
Sbjct: 10 TSKVQQIKTLISVAC------TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKY 63
Query: 505 SRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSITPNELTILSVLFACSH 564
S +F N + ++ G + E+++LF + K + + T VL AC+
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 565 SGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPFEPDSNAWA 624
+ G+ +S+ + T ++ + S SGRL++A + +P + W
Sbjct: 124 ASSRKLGID-LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWT 181
Query: 625 SLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYA-------SAGRWI 671
+L SG T + A K + ++ + P Y ++ + A +G WI
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVK-PDSYFIVQVLSACVHVGDLDSGEWI 234
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/630 (31%), Positives = 308/630 (48%), Gaps = 75/630 (11%)
Query: 83 NGFDLVVHNCMINANIQWGNLEEAQ--RLFDGMPERNEVSWTALISGFMKHGRVEESMWY 140
+ L++ N + ++++ G + A+ + D P ++ LI+ + K E +
Sbjct: 7 DALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPESARLV 64
Query: 141 FERNPFQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDF 200
P +NV+SWT+ I G QNG AL F ++ GV PN+ TF KA A +
Sbjct: 65 LRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLP 124
Query: 201 RLGLSVFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVF 260
G + L K G ++ +V + S FD K T + D
Sbjct: 125 VTGKQIHALAVKCG----------------RILDVFVGCSAFDMYCK------TRLRD-- 160
Query: 261 IEMGDLGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFS 320
+AR++FDE+PERN +W+ I+ G P EA F + R PN+ F
Sbjct: 161 -------DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFC 213
Query: 321 IVLSALASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEK 380
L+A + L GM +H VL+ G + DV + N LID Y KC
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK--------------- 258
Query: 381 DVAHVVSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFN 440
Q+ ++ +F M +N VSW ++++ Y+++ + + ++
Sbjct: 259 -------------------QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY- 298
Query: 441 EMLLSGEIPNKSTF--SSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLGTALTDTYAK 498
+ +I S F SSVL A A +A LE G+ +H +K +F+G+AL D Y K
Sbjct: 299 -LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGK 357
Query: 499 SGDIESSRRVFDRMPDKNEISWTVMVRGLAESGYAKESINLFEEMEKTSI--TPNELTIL 556
G IE S + FD MP+KN ++ ++ G A G ++ LFEEM TPN +T +
Sbjct: 358 CGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFV 417
Query: 557 SVLFACSHSGLVDKGLKYFNSMEPIYNIKPNGRHYTCVVDMLSRSGRLSEAEDFINSMPF 616
S+L ACS +G V+ G+K F+SM Y I+P HY+C+VDML R+G + A +FI MP
Sbjct: 418 SLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPI 477
Query: 617 EPDSNAWASLLSGCKTYKNEQIAERAVKNLWKLAEEHPAGYVLLSNIYASAGRWIDAMNV 676
+P + W +L + C+ + Q+ A +NL+KL + +VLLSN +A+AGRW +A V
Sbjct: 478 QPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTV 537
Query: 677 RKLMTEKGLRKSGGCSWVEVRNQVHFFFQK 706
R+ + G++K G SW+ V+NQVH F K
Sbjct: 538 REELKGVGIKKGAGYSWITVKNQVHAFQAK 567
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 202/498 (40%), Gaps = 132/498 (26%)
Query: 26 CLLKDITSQNLVIQGRALHGHLIKTGIHKERYLTTRLLIMYLGSRKSLEANEIVKDLNGF 85
C K + S L + G+ +H +K G R+L +++G + F
Sbjct: 113 CAFKAVASLRLPVTGKQIHALAVKCG---------RILDVFVGC-------------SAF 150
Query: 86 DLVVHNCMINANIQWGNLEEAQRLFDGMPERNEVSWTALISGFMKHGRVEESMWYFERNP 145
D+ + ++A++LFD +PERN +W A IS + GR
Sbjct: 151 DMYCKTRL---------RDDARKLFDEIPERNLETWNAFISNSVTDGRPR---------- 191
Query: 146 FQNVISWTAAICGFVQNGFSFEALKLFLKLLESGVKPNEVTFSSICKACAEINDFRLGLS 205
EA++ F++ PN +TF + AC++ LG+
Sbjct: 192 ---------------------EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 230
Query: 206 VFGLIFKAGFEKHVSVCNSLITLSLKMGEVDLARSVFDRMEKRDVVSWTVILDVFIEMGD 265
+ GL+ ++GF+ VSVCN LI K ++ + +F M ++ VSW
Sbjct: 231 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC----------- 279
Query: 266 LGEARRIFDEMPERNEVSWSVMIARYNQSGYPEEAFRLFRQMTRYSFKPNTSCFSIVLSA 325
++A Y Q+ E+A L+ + + + + S VLSA
Sbjct: 280 --------------------SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 319
Query: 326 LASLKALRSGMHVHAHVLKIGIEKDVFISNALIDLYSKCGETKDGRLVFDSIVEKDVAHV 385
A + L G +HAH +K +E+ +F+ +AL+D+Y KCG +D FD + EK+ +
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN---L 376
Query: 386 VSWNSMIGGYGLNGQMEEAKELFDNMPKRNDVSWSAIISGYLEHKQFDLVFAVFNEMLLS 445
V+ NS+IGGY GQ++ A LF+ M R
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRG-----------------------------C 407
Query: 446 GEIPNKSTFSSVLCASASVASLEKGKDLHGKIIKLGFPYDVFLG----TALTDTYAKSGD 501
G PN TF S+L A + ++E G + + Y + G + + D ++G
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST---YGIEPGAEHYSCIVDMLGRAGM 464
Query: 502 IESSRRVFDRMPDKNEIS 519
+E + +MP + IS
Sbjct: 465 VERAYEFIKKMPIQPTIS 482
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 261,066,988
Number of Sequences: 539616
Number of extensions: 10796941
Number of successful extensions: 37957
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 25341
Number of HSP's gapped (non-prelim): 3190
length of query: 712
length of database: 191,569,459
effective HSP length: 125
effective length of query: 587
effective length of database: 124,117,459
effective search space: 72856948433
effective search space used: 72856948433
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)