Query 005141
Match_columns 712
No_of_seqs 267 out of 1452
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 16:39:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005141.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005141hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.6 2.4E-16 8.2E-21 133.8 5.4 69 90-158 6-75 (79)
2 1hdj_A Human HSP40, HDJ-1; mol 99.6 5.1E-16 1.7E-20 131.4 6.8 70 89-159 1-71 (77)
3 2yua_A Williams-beuren syndrom 99.6 3.8E-16 1.3E-20 138.6 5.6 69 90-158 16-85 (99)
4 2och_A Hypothetical protein DN 99.6 4.8E-16 1.6E-20 130.4 5.9 68 86-156 3-71 (73)
5 1wjz_A 1700030A21RIK protein; 99.6 7.5E-16 2.6E-20 134.6 7.4 70 90-159 15-91 (94)
6 2ej7_A HCG3 gene; HCG3 protein 99.6 9.9E-16 3.4E-20 130.9 7.9 68 91-158 9-78 (82)
7 2ctp_A DNAJ homolog subfamily 99.6 1.3E-15 4.5E-20 129.1 7.8 69 90-159 6-75 (78)
8 2cug_A Mkiaa0962 protein; DNAJ 99.6 1.4E-15 4.6E-20 132.3 7.5 70 88-158 14-84 (88)
9 2ctq_A DNAJ homolog subfamily 99.6 7.7E-16 2.6E-20 139.6 5.4 70 90-159 19-89 (112)
10 1bq0_A DNAJ, HSP40; chaperone, 99.6 8.1E-16 2.8E-20 137.3 4.9 70 90-159 2-72 (103)
11 2ctr_A DNAJ homolog subfamily 99.6 2.1E-15 7.3E-20 131.0 6.1 67 90-157 6-73 (88)
12 2lgw_A DNAJ homolog subfamily 99.6 2.6E-15 8.9E-20 133.9 5.6 70 91-160 2-73 (99)
13 2dmx_A DNAJ homolog subfamily 99.5 2.7E-15 9.2E-20 131.1 5.5 69 91-159 9-79 (92)
14 2ctw_A DNAJ homolog subfamily 99.5 3.4E-15 1.2E-19 134.9 6.3 68 90-157 16-84 (109)
15 2o37_A Protein SIS1; HSP40, J- 99.5 3.4E-15 1.2E-19 130.9 5.4 70 86-158 3-73 (92)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.5 7.2E-15 2.5E-19 132.3 5.2 72 87-158 11-87 (109)
17 3hho_A CO-chaperone protein HS 99.5 1E-13 3.6E-18 134.9 13.5 68 90-157 3-78 (174)
18 3apq_A DNAJ homolog subfamily 99.5 2.4E-14 8E-19 139.3 5.5 69 91-159 2-71 (210)
19 2l6l_A DNAJ homolog subfamily 99.4 2.7E-14 9.3E-19 135.7 3.9 68 91-158 10-84 (155)
20 1fpo_A HSC20, chaperone protei 99.4 1E-12 3.4E-17 127.8 14.6 67 91-157 1-75 (171)
21 2ys8_A RAB-related GTP-binding 99.4 1.4E-13 4.9E-18 120.4 3.0 62 89-151 25-87 (90)
22 3lz8_A Putative chaperone DNAJ 99.3 1E-13 3.6E-18 147.1 0.0 65 91-156 28-93 (329)
23 1gh6_A Large T antigen; tumor 99.3 8.1E-14 2.8E-18 127.6 -0.9 61 91-155 8-71 (114)
24 3bvo_A CO-chaperone protein HS 99.3 1.4E-12 4.8E-17 130.5 7.5 67 91-157 43-117 (207)
25 2pf4_E Small T antigen; PP2A, 99.3 2.5E-13 8.6E-18 132.8 0.0 63 91-157 11-76 (174)
26 1faf_A Large T antigen; J doma 99.3 7.2E-13 2.4E-17 113.6 2.0 59 91-153 11-72 (79)
27 1n4c_A Auxilin; four helix bun 99.3 6.7E-13 2.3E-17 130.7 0.5 62 91-152 117-182 (182)
28 1iur_A KIAA0730 protein; DNAJ 99.2 1.1E-12 3.9E-17 114.9 1.3 59 91-149 16-76 (88)
29 3uo3_A J-type CO-chaperone JAC 99.2 2.3E-12 7.9E-17 126.5 3.4 65 90-157 10-82 (181)
30 3apo_A DNAJ homolog subfamily 99.2 2.2E-12 7.7E-17 147.9 0.5 72 88-159 18-90 (780)
31 2qwo_B Putative tyrosine-prote 99.2 3.3E-12 1.1E-16 113.2 1.1 55 91-145 33-91 (92)
32 2guz_A Mitochondrial import in 99.2 4.3E-12 1.5E-16 106.5 1.4 55 91-149 14-70 (71)
33 3ag7_A Putative uncharacterize 99.2 5.1E-12 1.7E-16 114.3 1.4 56 91-147 41-104 (106)
34 2y4t_A DNAJ homolog subfamily 98.6 1.8E-08 6.3E-13 103.4 4.8 65 91-155 382-450 (450)
35 2guz_B Mitochondrial import in 98.1 1.9E-06 6.6E-11 71.8 3.6 48 93-144 6-57 (65)
36 2pzi_A Probable serine/threoni 89.5 0.15 5.3E-06 57.7 3.0 46 90-142 628-675 (681)
37 3ma5_A Tetratricopeptide repea 73.5 28 0.00095 28.5 10.0 77 179-271 16-92 (100)
38 3gw4_A Uncharacterized protein 71.2 21 0.00072 31.6 9.3 84 179-272 116-199 (203)
39 2yhc_A BAMD, UPF0169 lipoprote 64.6 91 0.0031 29.0 20.8 196 179-429 13-208 (225)
40 4a1s_A PINS, partner of inscut 55.7 1.5E+02 0.0051 29.4 13.2 64 179-250 57-120 (411)
41 3qww_A SET and MYND domain-con 53.5 59 0.002 35.2 10.4 81 179-268 349-432 (433)
42 2xcb_A PCRH, regulatory protei 53.2 55 0.0019 28.1 8.4 77 179-270 61-137 (142)
43 2kat_A Uncharacterized protein 52.9 92 0.0031 25.3 10.1 77 179-271 28-104 (115)
44 3qwp_A SET and MYND domain-con 46.3 54 0.0018 35.3 8.7 64 179-249 338-404 (429)
45 2vgx_A Chaperone SYCD; alterna 45.2 93 0.0032 27.4 8.8 77 179-270 64-140 (148)
46 3ro3_A PINS homolog, G-protein 43.4 47 0.0016 27.4 6.1 66 179-250 98-163 (164)
47 3upv_A Heat shock protein STI1 42.3 1.4E+02 0.0048 24.4 9.3 79 179-269 47-125 (126)
48 3ma5_A Tetratricopeptide repea 41.6 31 0.0011 28.2 4.7 44 371-429 22-65 (100)
49 3ro3_A PINS homolog, G-protein 41.5 1.4E+02 0.0049 24.3 9.3 64 179-250 58-123 (164)
50 2v5f_A Prolyl 4-hydroxylase su 40.0 81 0.0028 26.3 7.2 34 214-249 5-38 (104)
51 3mkr_A Coatomer subunit epsilo 35.8 2.5E+02 0.0087 27.5 11.2 45 370-429 180-224 (291)
52 3gw4_A Uncharacterized protein 35.1 1.5E+02 0.0051 26.0 8.4 65 179-250 75-141 (203)
53 3k9i_A BH0479 protein; putativ 33.6 52 0.0018 27.2 4.9 44 371-429 42-85 (117)
54 3n71_A Histone lysine methyltr 33.5 1.6E+02 0.0055 32.3 10.1 64 179-249 360-426 (490)
55 2xev_A YBGF; tetratricopeptide 33.5 1.4E+02 0.0048 24.1 7.6 58 179-245 48-105 (129)
56 2kat_A Uncharacterized protein 33.0 1E+02 0.0035 25.0 6.6 56 352-429 22-77 (115)
57 3k9i_A BH0479 protein; putativ 32.8 1.4E+02 0.0047 24.6 7.4 55 179-245 36-90 (117)
58 2xcb_A PCRH, regulatory protei 32.1 54 0.0018 28.2 4.9 44 371-429 67-110 (142)
59 2l6j_A TPR repeat-containing p 31.6 79 0.0027 24.9 5.5 44 371-429 19-62 (111)
60 2xev_A YBGF; tetratricopeptide 30.2 1.7E+02 0.0059 23.6 7.6 58 179-245 11-68 (129)
61 2lni_A Stress-induced-phosphop 30.0 1.1E+02 0.0038 24.5 6.2 45 370-429 64-108 (133)
62 1pc2_A Mitochondria fission pr 29.7 1.1E+02 0.0038 28.9 6.9 64 349-429 32-95 (152)
63 4gcn_A Protein STI-1; structur 29.5 1.9E+02 0.0066 24.5 8.0 60 179-245 51-112 (127)
64 1qqe_A Vesicular transport pro 28.5 4.1E+02 0.014 25.6 15.6 65 178-250 45-111 (292)
65 2yhc_A BAMD, UPF0169 lipoprote 27.8 3.6E+02 0.012 24.8 10.2 131 106-245 21-176 (225)
66 2kc7_A BFR218_protein; tetratr 27.4 82 0.0028 24.7 4.9 43 372-429 16-59 (99)
67 3sf4_A G-protein-signaling mod 27.0 2.5E+02 0.0085 27.3 9.2 19 232-250 323-341 (406)
68 3sz7_A HSC70 cochaperone (SGT) 26.3 77 0.0026 27.6 4.9 44 371-429 26-69 (164)
69 2vgx_A Chaperone SYCD; alterna 26.2 75 0.0026 28.0 4.9 44 371-429 70-113 (148)
70 1na3_A Designed protein CTPR2; 25.3 1E+02 0.0035 23.3 4.9 44 371-429 24-67 (91)
71 3gyz_A Chaperone protein IPGC; 24.6 71 0.0024 28.9 4.4 56 352-429 39-94 (151)
72 3gyz_A Chaperone protein IPGC; 24.6 70 0.0024 29.0 4.4 44 371-429 85-128 (151)
73 4a1s_A PINS, partner of inscut 24.4 5.1E+02 0.018 25.4 15.3 57 186-250 199-257 (411)
74 3upv_A Heat shock protein STI1 24.4 96 0.0033 25.5 4.9 56 352-429 41-96 (126)
75 3sz7_A HSC70 cochaperone (SGT) 23.3 96 0.0033 27.0 4.9 56 352-429 48-103 (164)
76 4gyw_A UDP-N-acetylglucosamine 23.1 8.9E+02 0.03 27.7 17.0 153 178-429 17-169 (723)
77 3ro2_A PINS homolog, G-protein 23.0 4.5E+02 0.015 24.2 13.1 64 179-250 14-77 (338)
78 1nzn_A CGI-135 protein, fissio 22.3 1.3E+02 0.0046 27.6 5.8 63 349-428 35-97 (126)
79 2dba_A Smooth muscle cell asso 22.2 1.2E+02 0.004 25.0 5.1 44 371-429 80-123 (148)
80 2lni_A Stress-induced-phosphop 22.1 82 0.0028 25.3 4.0 43 372-429 32-74 (133)
81 1na0_A Designed protein CTPR3; 22.0 1.2E+02 0.0042 23.7 4.9 44 371-429 24-67 (125)
82 1hxi_A PEX5, peroxisome target 22.0 1.8E+02 0.0061 24.5 6.3 56 352-429 20-75 (121)
83 1elw_A TPR1-domain of HOP; HOP 21.1 1.3E+02 0.0044 23.3 4.9 44 371-429 19-62 (118)
84 1elr_A TPR2A-domain of HOP; HO 21.0 1.4E+02 0.0046 23.7 5.1 44 371-429 19-62 (131)
85 4eqf_A PEX5-related protein; a 20.7 5.8E+02 0.02 24.7 18.6 57 177-245 72-128 (365)
86 3iqc_A FLIS, flagellar protein 20.5 1.7E+02 0.006 26.8 6.2 67 213-282 35-101 (131)
87 2dba_A Smooth muscle cell asso 20.1 1.9E+02 0.0065 23.7 5.9 47 371-429 43-89 (148)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=2.4e-16 Score=133.79 Aligned_cols=69 Identities=23% Similarity=0.298 Sum_probs=62.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005141 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (712)
Q Consensus 90 PlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~ 158 (712)
..|||+||||+++++.++||+|||+++++ |||++.+.+.+.++|+.|++||++|+||.+|+.||..+..
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 46999999999999999999999999987 7999876566788999999999999999999999998654
No 2
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.61 E-value=5.1e-16 Score=131.35 Aligned_cols=70 Identities=20% Similarity=0.351 Sum_probs=62.2
Q ss_pred cCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005141 89 IPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (712)
Q Consensus 89 iPlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~ 159 (712)
|..|||+||||+++++.++||+|||+++++ |||++.++ ...++|+.|++||++|+||.+|+.||....++
T Consensus 1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP-GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT-THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 356999999999999999999999999988 79997654 35678999999999999999999999986543
No 3
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=3.8e-16 Score=138.63 Aligned_cols=69 Identities=23% Similarity=0.314 Sum_probs=62.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005141 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (712)
Q Consensus 90 PlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~ 158 (712)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.+.++|+.|++||+||+||.+|+.||..+..
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 35999999999999999999999999987 7999876666788999999999999999999999998754
No 4
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.61 E-value=4.8e-16 Score=130.43 Aligned_cols=68 Identities=21% Similarity=0.342 Sum_probs=59.5
Q ss_pred CcccCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcc
Q 005141 86 HVSIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (712)
Q Consensus 86 ~m~iPlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L 156 (712)
.|....|||+||||+++++.++||+|||+++++ |||++.+. ..+|+.|++||++|+||.+|+.||...
T Consensus 3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 467788999999999999999999999999987 79997643 468999999999999999999999875
No 5
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.61 E-value=7.5e-16 Score=134.60 Aligned_cols=70 Identities=17% Similarity=0.289 Sum_probs=62.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCC------hHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005141 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFS------PDALISRRQILQAACETLANASSRREYNQGLADD 159 (712)
Q Consensus 90 PlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s------~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~ 159 (712)
..|||+||||+++|+.+|||+|||+++++ |||++.. .+...++|+.|++||+||+||.+|+.||..+...
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~ 91 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSGP 91 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCCS
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccCC
Confidence 46999999999999999999999999988 7999653 1456789999999999999999999999988643
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=9.9e-16 Score=130.85 Aligned_cols=68 Identities=22% Similarity=0.335 Sum_probs=61.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLAD 158 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~-~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~ 158 (712)
.|||+||||+++++.++||+|||+++++ |||++.+. +.+.++|+.|++||++|+||.+|+.||.....
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp CCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 5999999999999999999999999988 79997654 46778999999999999999999999987643
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.3e-15 Score=129.11 Aligned_cols=69 Identities=22% Similarity=0.364 Sum_probs=61.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005141 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (712)
Q Consensus 90 PlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~ 159 (712)
..|||+||||+++++.++||+|||+++++ |||++..+ ...++|+.|++||++|+||.+|+.||..+..+
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP-GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 46999999999999999999999999988 79997654 46789999999999999999999999987543
No 8
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.59 E-value=1.4e-15 Score=132.27 Aligned_cols=70 Identities=23% Similarity=0.330 Sum_probs=62.3
Q ss_pred ccCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005141 88 SIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (712)
Q Consensus 88 ~iPlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~ 158 (712)
....|||+||||+++|+.++||+|||+++++ |||++.+. ...++|+.|++||++|+||.+|+.||.....
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP-GAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST-THHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh-hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 3467999999999999999999999999987 79997653 4578999999999999999999999988654
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=7.7e-16 Score=139.63 Aligned_cols=70 Identities=24% Similarity=0.274 Sum_probs=63.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005141 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (712)
Q Consensus 90 PlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~ 159 (712)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.+.++|+.|++||+||+||.+|+.||..+..+
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 46999999999999999999999999988 79998755567889999999999999999999999987643
No 10
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.58 E-value=8.1e-16 Score=137.30 Aligned_cols=70 Identities=23% Similarity=0.310 Sum_probs=63.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005141 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (712)
Q Consensus 90 PlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~ 159 (712)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.++++|+.|++||++|+||.+|+.||....++
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 46999999999999999999999999998 79998765567789999999999999999999999987654
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.1e-15 Score=131.02 Aligned_cols=67 Identities=24% Similarity=0.301 Sum_probs=60.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005141 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (712)
Q Consensus 90 PlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~ 157 (712)
..|||+||||+++|+.++||+|||+++++ |||++.+ +...++|+.|++||++|+||.+|+.||..+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 35899999999999999999999999987 7999774 4567899999999999999999999998764
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.55 E-value=2.6e-15 Score=133.86 Aligned_cols=70 Identities=17% Similarity=0.261 Sum_probs=61.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHHcCCchhhHHHhhcccCCC
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLADDH 160 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~-~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~~ 160 (712)
.|||+||||+++|+.++||+|||+++++ |||++.+. +.+.++|+.|++||++|+||.+|+.||....++.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~ 73 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 4899999999999999999999999987 79997653 4577899999999999999999999999876543
No 13
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.7e-15 Score=131.10 Aligned_cols=69 Identities=19% Similarity=0.379 Sum_probs=61.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLADD 159 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~-~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~ 159 (712)
.|||+||||+++++.++||+|||+++++ |||++.+. +.+.++|+.|++||++|+||.+|+.||....+.
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 4899999999999999999999999987 79997653 467889999999999999999999999986543
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.55 E-value=3.4e-15 Score=134.89 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=62.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005141 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (712)
Q Consensus 90 PlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~ 157 (712)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.+.++|+.|++||+||+||.+|+.||....
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 46999999999999999999999999987 799987666678899999999999999999999998753
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.54 E-value=3.4e-15 Score=130.90 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=61.2
Q ss_pred CcccCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005141 86 HVSIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (712)
Q Consensus 86 ~m~iPlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~ 158 (712)
.|....|||+||||+++++.++||+|||+++++ |||++... .++|+.|++||++|+||.+|+.||....+
T Consensus 3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 73 (92)
T 2o37_A 3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLE 73 (92)
T ss_dssp -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHH
T ss_pred ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHH
Confidence 455678999999999999999999999999988 89997544 24899999999999999999999987543
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.51 E-value=7.2e-15 Score=132.26 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=63.8
Q ss_pred cccCCCcccccCCCCCC-CHHHHHHHHHHHHhC-CCCCCCC---hHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005141 87 VSIPIDFYQALGAETHF-LGDGIRRAYEARISK-PPQYGFS---PDALISRRQILQAACETLANASSRREYNQGLAD 158 (712)
Q Consensus 87 m~iPlDyYeILGV~~~A-s~eEIKkAYRkla~~-~PDk~~s---~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~ 158 (712)
+....|||+||||+++| +.++||+|||+++++ |||++.+ .+.+.++|+.|++||++|+||.+|+.||..+..
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 34457999999999999 999999999999987 7998765 455778999999999999999999999998754
No 17
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.51 E-value=1e-13 Score=134.93 Aligned_cols=68 Identities=18% Similarity=0.339 Sum_probs=60.2
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHhC-CCCCCCChHH-----HHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005141 90 PIDFYQALGAETHFL--GDGIRRAYEARISK-PPQYGFSPDA-----LISRRQILQAACETLANASSRREYNQGLA 157 (712)
Q Consensus 90 PlDyYeILGV~~~As--~eEIKkAYRkla~~-~PDk~~s~~a-----~~~RfqlI~eAYeVLSDp~~R~~YD~~L~ 157 (712)
+.|||+||||+++++ .++||+|||+++++ |||++.+... +..+|+.|++||+||+||.+|..||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 569999999999998 99999999999988 8998654332 56789999999999999999999999885
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.47 E-value=2.4e-14 Score=139.29 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=62.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~ 159 (712)
.|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||++|+||.+|+.||....++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 71 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 71 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccc
Confidence 4899999999999999999999999988 89998665667889999999999999999999999987554
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.45 E-value=2.7e-14 Score=135.73 Aligned_cols=68 Identities=21% Similarity=0.346 Sum_probs=60.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh------HHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP------DALISRRQILQAACETLANASSRREYNQGLAD 158 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~------~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~ 158 (712)
.|||+||||+++|+.++||+|||+++++ |||++.+. +.+.++|+.|++||++|+||.+|+.||..+..
T Consensus 10 ~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 10 KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp SHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 5899999999999999999999999988 89997543 13568999999999999999999999987643
No 20
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.44 E-value=1e-12 Score=127.76 Aligned_cols=67 Identities=18% Similarity=0.290 Sum_probs=59.4
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHhC-CCCCCCChH-----HHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005141 91 IDFYQALGAETHF--LGDGIRRAYEARISK-PPQYGFSPD-----ALISRRQILQAACETLANASSRREYNQGLA 157 (712)
Q Consensus 91 lDyYeILGV~~~A--s~eEIKkAYRkla~~-~PDk~~s~~-----a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~ 157 (712)
.|||+||||++++ +.++||++||+++++ |||++.+.. .+..+|+.|++||+||+||.+|..||..+.
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 3899999999999 999999999999987 799865432 245789999999999999999999999876
No 21
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=1.4e-13 Score=120.35 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=55.1
Q ss_pred cCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHH
Q 005141 89 IPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRRE 151 (712)
Q Consensus 89 iPlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~ 151 (712)
...|||+||||+++|+.+|||+|||+++++ |||++.+. ...++|+.|++||++|+||.+|+.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP-GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT-THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCcccccC
Confidence 357999999999999999999999999988 89998654 356789999999999999998864
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.33 E-value=1e-13 Score=147.12 Aligned_cols=65 Identities=26% Similarity=0.291 Sum_probs=0.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcc
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L 156 (712)
.|||+||||+++|+.+|||+|||+++++ |||++.+. .++++|+.|++||++|+||.+|+.||+..
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 93 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN-DAEAKFKDLAEAWEVLKDEQRRAEYDQLW 93 (329)
T ss_dssp -------------------------------------------------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh-HHHHHHHHHHHHHHHhhhhhhhcccchhh
Confidence 6999999999999999999999999998 79987644 56789999999999999999999999874
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.33 E-value=8.1e-14 Score=127.62 Aligned_cols=61 Identities=15% Similarity=0.224 Sum_probs=56.1
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhc
Q 005141 91 IDFYQALGAETHFLG--DGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQG 155 (712)
Q Consensus 91 lDyYeILGV~~~As~--eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~ 155 (712)
.+||+||||+++|+. ++||+|||+++++ |||++.+ .++|+.|++||+||+||.+|+.||..
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~ 71 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDF 71 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhc
Confidence 589999999999999 9999999999998 7999765 36899999999999999999999964
No 24
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.32 E-value=1.4e-12 Score=130.45 Aligned_cols=67 Identities=15% Similarity=0.169 Sum_probs=58.5
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHhC-CCCCCCChH-----HHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005141 91 IDFYQALGAETH--FLGDGIRRAYEARISK-PPQYGFSPD-----ALISRRQILQAACETLANASSRREYNQGLA 157 (712)
Q Consensus 91 lDyYeILGV~~~--As~eEIKkAYRkla~~-~PDk~~s~~-----a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~ 157 (712)
.|||+||||+++ ++.++||++||+++++ |||++.+.. .+.++|+.|++||+||+||.+|+.||..+.
T Consensus 43 ~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 43 RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp CCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 599999999997 6899999999999988 899865421 245789999999999999999999998765
No 25
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.29 E-value=2.5e-13 Score=132.82 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=55.0
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005141 91 IDFYQALGAETHFL--GDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (712)
Q Consensus 91 lDyYeILGV~~~As--~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~ 157 (712)
.|||+||||+++|+ .+|||+|||+++++ |||++.++ ++|+.|++||++|+||.+|+.||....
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~----e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999999 69999999999988 79997653 579999999999999999999999763
No 26
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.28 E-value=7.2e-13 Score=113.62 Aligned_cols=59 Identities=17% Similarity=0.054 Sum_probs=52.9
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHh
Q 005141 91 IDFYQALGAETH--FLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYN 153 (712)
Q Consensus 91 lDyYeILGV~~~--As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD 153 (712)
.++|+||||+++ ++.++||+|||+++++ |||++.+ .++|+.|++||++|+|+.+|..++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 479999999999 9999999999999987 7999765 368999999999999999998854
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.25 E-value=6.7e-13 Score=130.66 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=55.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChH---HHHHHHHHHHHHHHHcCCchhhHHH
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPD---ALISRRQILQAACETLANASSRREY 152 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~---a~~~RfqlI~eAYeVLSDp~~R~~Y 152 (712)
.|||+||||+++|+.++||+|||+++++ |||++.... .+.++|+.|++||+||+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 5899999999999999999999999987 799865432 2678999999999999999999887
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.24 E-value=1.1e-12 Score=114.90 Aligned_cols=59 Identities=10% Similarity=-0.013 Sum_probs=53.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHHcCCchhh
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSR 149 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~-~a~~~RfqlI~eAYeVLSDp~~R 149 (712)
.++|+||||+++|+.+|||+|||+++++ |||++.+. +.+.++|+.|++||++|+|...|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 4899999999999999999999999987 79998754 45788999999999999998777
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.24 E-value=2.3e-12 Score=126.48 Aligned_cols=65 Identities=18% Similarity=0.254 Sum_probs=57.8
Q ss_pred CCCccccc------CCCC-CCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005141 90 PIDFYQAL------GAET-HFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (712)
Q Consensus 90 PlDyYeIL------GV~~-~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~ 157 (712)
..|||+|| |+++ +++.++||+|||+++++ |||++.+ +..+|+.|++||+||+||.+|..||..+.
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~ 82 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKLL 82 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 35999999 4665 89999999999999998 7999765 45789999999999999999999999883
No 30
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.18 E-value=2.2e-12 Score=147.89 Aligned_cols=72 Identities=19% Similarity=0.228 Sum_probs=40.6
Q ss_pred ccCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005141 88 SIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (712)
Q Consensus 88 ~iPlDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R~~YD~~L~~~ 159 (712)
....|||+||||+++|+.+|||+|||+++++ |||++.+.+.+.++|+.|++||++|+||.+|+.||....++
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~ 90 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 90 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccc
Confidence 3346999999999999999999999999988 79998666677889999999999999999999999987543
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.18 E-value=3.3e-12 Score=113.15 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=48.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChH---HHHHHHHHHHHHHHHcCC
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPD---ALISRRQILQAACETLAN 145 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~~---a~~~RfqlI~eAYeVLSD 145 (712)
.+||++|||+++|+.+|||+|||+++++ |||++.+.+ .++.+|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 4899999999999999999999999987 799875432 478899999999999965
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.17 E-value=4.3e-12 Score=106.54 Aligned_cols=55 Identities=15% Similarity=0.113 Sum_probs=48.9
Q ss_pred CCcccccCCCC-CCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhh
Q 005141 91 IDFYQALGAET-HFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSR 149 (712)
Q Consensus 91 lDyYeILGV~~-~As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLSDp~~R 149 (712)
.++|+||||++ +++.++||+|||+++++ |||++.+. .+|+.|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~----~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP----FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH----HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH----HHHHHHHHHHHHHhhhhhc
Confidence 48999999999 79999999999999987 89997554 3799999999999997765
No 33
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.16 E-value=5.1e-12 Score=114.29 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=48.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCC----ChH---HHHHHHHHHHHHHHHcCCch
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGF----SPD---ALISRRQILQAACETLANAS 147 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~----s~~---a~~~RfqlI~eAYeVLSDp~ 147 (712)
.|||+|||++. |+.++||+|||+++++ |||++. +.+ .++++|+.|++||+||+|+.
T Consensus 41 ~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 59999999996 9999999999999988 899853 222 35789999999999999975
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.62 E-value=1.8e-08 Score=103.39 Aligned_cols=65 Identities=22% Similarity=0.314 Sum_probs=52.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh---HHHHHHHHHHHHHHHHcCCchhhHHHhhc
Q 005141 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP---DALISRRQILQAACETLANASSRREYNQG 155 (712)
Q Consensus 91 lDyYeILGV~~~As~eEIKkAYRkla~~-~PDk~~s~---~a~~~RfqlI~eAYeVLSDp~~R~~YD~~ 155 (712)
.+||.+||+.+.++.++|+++|++++++ |||+..++ ..++.+|+.|.+||++|+||++|+.||.+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 3899999999999999999999997654 79987765 35678999999999999999999999974
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.07 E-value=1.9e-06 Score=71.79 Aligned_cols=48 Identities=19% Similarity=0.083 Sum_probs=40.7
Q ss_pred cccccCCCCC---CCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcC
Q 005141 93 FYQALGAETH---FLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLA 144 (712)
Q Consensus 93 yYeILGV~~~---As~eEIKkAYRkla~~-~PDk~~s~~a~~~RfqlI~eAYeVLS 144 (712)
-|+||||+++ ++.++|+++||++... |||+|-|..- +..|++|+++|.
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl----~~ki~~Ake~l~ 57 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYL----QSKVYRAAERLK 57 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHH----HHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHH----HHHHHHHHHHHH
Confidence 4899999999 9999999999999875 7999987643 346889999884
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.52 E-value=0.15 Score=57.67 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=37.9
Q ss_pred CCCcccccCCCCCCCH--HHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHH
Q 005141 90 PIDFYQALGAETHFLG--DGIRRAYEARISKPPQYGFSPDALISRRQILQAACET 142 (712)
Q Consensus 90 PlDyYeILGV~~~As~--eEIKkAYRkla~~~PDk~~s~~a~~~RfqlI~eAYeV 142 (712)
..|||.|||++.+... .+|++|||++++..|+. ..|+.++..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 4469999999777665 77999999999887664 3689999999876
No 37
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=73.47 E-value=28 Score=28.52 Aligned_cols=77 Identities=9% Similarity=0.110 Sum_probs=53.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~L 258 (712)
++.+.|+++++++.-+++++-... ..++ +..++.-....+ +++.|.+.+++++++-...+ -...
T Consensus 16 ~~~~~g~~~~A~~~~~~al~~~p~---~~~a-------~~~lg~~~~~~g--~~~~A~~~~~~al~l~~~~~----~~~~ 79 (100)
T 3ma5_A 16 EHLKHDNASRALALFEELVETDPD---YVGT-------YYHLGKLYERLD--RTDDAIDTYAQGIEVAREEG----TQKD 79 (100)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTT---CTHH-------HHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHS----CHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC---cHHH-------HHHHHHHHHHcC--CHHHHHHHHHHHHhhhhcCC----chhH
Confidence 567889999999999999864221 2233 333333333343 59999999999999988776 4666
Q ss_pred HHHHHHHhHhhCh
Q 005141 259 QAQIDETLEEINP 271 (712)
Q Consensus 259 q~eI~~~L~~L~P 271 (712)
..++...|.++-.
T Consensus 80 ~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 80 LSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccc
Confidence 7777777765533
No 38
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=71.17 E-value=21 Score=31.63 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=57.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~L 258 (712)
++.+.|++++.++.-++.+.-...... ....+.++..++.-.+..+ ++..|...+++++++.++.| -+..
T Consensus 116 ~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~----~~~~ 185 (203)
T 3gw4_A 116 VALHFGDLAGARQEYEKSLVYAQQADD----QVAIACAFRGLGDLAQQEK--NLLEAQQHWLRARDIFAELE----DSEA 185 (203)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT----CHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhccc----hHHHHHHHHHHHHHHHHCc--CHHHHHHHHHHHHHHHHHcC----CHHH
Confidence 556788998888888877753111111 1223444555666666664 59999999999999999987 5777
Q ss_pred HHHHHHHhHhhChh
Q 005141 259 QAQIDETLEEINPR 272 (712)
Q Consensus 259 q~eI~~~L~~L~P~ 272 (712)
..++...+.++.|.
T Consensus 186 ~~~~~~~~~~~~~~ 199 (203)
T 3gw4_A 186 VNELMTRLNGLEHH 199 (203)
T ss_dssp HHHHHHHHHTTCC-
T ss_pred HHHHHhcccchhhc
Confidence 78888877777553
No 39
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=64.62 E-value=91 Score=28.98 Aligned_cols=196 Identities=11% Similarity=0.043 Sum_probs=104.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~L 258 (712)
.+.+.|+++.+++.=+.+++.....+...+..+-+|.+|.. . .+|..|...+++.++ ....+...+..
T Consensus 13 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-------~--~~~~~A~~~~~~~l~---~~P~~~~~~~a 80 (225)
T 2yhc_A 13 QKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-------N--ADLPLAQAAIDRFIR---LNPTHPNIDYV 80 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-------T--TCHHHHHHHHHHHHH---HCTTCTTHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-------c--CCHHHHHHHHHHHHH---HCcCCCcHHHH
Confidence 46678999999999898887544455556666666655533 3 258888888877765 34433334444
Q ss_pred HHHHHHHhHhhChhhHHHhhCCCCChhhHHHHHHHHHHHHHHHHHhCCCCCCccCCCCChHHHHHHHHhhhcHHHHHHhh
Q 005141 259 QAQIDETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNILWAVGGGGATAIAGGFTRESFMNEAFLRMTSAEQVKLF 338 (712)
Q Consensus 259 q~eI~~~L~~L~P~riLELLalPl~~e~~~~Rq~GL~lLr~lL~~rgg~G~~~~~~gl~~~dFl~q~~~~LTa~EQvdLF 338 (712)
.-.+-..+.++.+..+-.++.+........+-.+++..++.++..-.. +...+ + +...+..... .+
T Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~-------~~~a~-~----a~~~l~~~~~-~~- 146 (225)
T 2yhc_A 81 MYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN-------SQYTT-D----ATKRLVFLKD-RL- 146 (225)
T ss_dssp HHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTT-------CTTHH-H----HHHHHHHHHH-HH-
T ss_pred HHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcC-------ChhHH-H----HHHHHHHHHH-HH-
Confidence 444444555544443333333332222224567888999988874211 11111 1 1111110000 00
Q ss_pred hcCCCCCCchhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhh
Q 005141 339 SATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLV 418 (712)
Q Consensus 339 ~~~~~~~s~~a~~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLL 418 (712)
...-|..+..+...| -..+|...++++... . |......+...-.+.|+.-+
T Consensus 147 ----------~~~~~~~a~~~~~~~-------~~~~A~~~~~~~l~~----~--------p~~~~~~~a~~~l~~~~~~~ 197 (225)
T 2yhc_A 147 ----------AKYEYSVAEYYTERG-------AWVAVVNRVEGMLRD----Y--------PDTQATRDALPLMENAYRQM 197 (225)
T ss_dssp ----------HHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHH----S--------TTSHHHHHHHHHHHHHHHHT
T ss_pred ----------HHHHHHHHHHHHHcC-------cHHHHHHHHHHHHHH----C--------cCCCccHHHHHHHHHHHHHc
Confidence 000122233333333 346777777776643 1 11122357888999999999
Q ss_pred CChHHHHHHhc
Q 005141 419 GKLDECRLWLG 429 (712)
Q Consensus 419 Gq~~eA~~~l~ 429 (712)
|+.++|...+.
T Consensus 198 g~~~~A~~~~~ 208 (225)
T 2yhc_A 198 QMNAQAEKVAK 208 (225)
T ss_dssp TCHHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 99999999984
No 40
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=55.67 E-value=1.5e+02 Score=29.41 Aligned_cols=64 Identities=13% Similarity=0.184 Sum_probs=43.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcC
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g 250 (712)
.+...|++++.+++-++.++-.... . ...+-++..++.-.+..+ +|..|.+.+++++++.++.+
T Consensus 57 ~~~~~g~~~~A~~~~~~al~~~~~~---~---~~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 57 RLCNAGDCRAGVAFFQAAIQAGTED---L---RTLSAIYSQLGNAYFYLG--DYNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCSC---H---HHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCcHHHHHHHHHHHHHhcccC---h---hHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHcc
Confidence 3467788888888888888742111 1 122334455555555554 59999999999999988765
No 41
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=53.46 E-value=59 Score=35.21 Aligned_cols=81 Identities=17% Similarity=0.341 Sum_probs=56.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCC
Q 005141 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLA 255 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~---~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~ 255 (712)
++...|+|++++.+.++.|.- .+|.. ..|++ .++--||.-.+.++ +|+.|..++++|++++...=++. -
T Consensus 349 ~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-Hp~~a----~~l~nLa~~~~~qg--~~~eA~~~~~~Al~i~~~~lG~~-H 420 (433)
T 3qww_A 349 VCLYMQDWEGALKYGQKIIKPYSKHYPVY-SLNVA----SMWLKLGRLYMGLE--NKAAGEKALKKAIAIMEVAHGKD-H 420 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCSS-CHHHH----HHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCTT-C
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHcCCC-ChHHH----HHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHcCCC-C
Confidence 567889999999999999953 34543 34543 34455666677775 59999999999999998863222 3
Q ss_pred hHHHHHHHHHhHh
Q 005141 256 PDLQAQIDETLEE 268 (712)
Q Consensus 256 p~Lq~eI~~~L~~ 268 (712)
|..+ +++..|++
T Consensus 421 p~~~-~l~~~l~~ 432 (433)
T 3qww_A 421 PYIS-EIKQEIES 432 (433)
T ss_dssp HHHH-HHHHHHHC
T ss_pred hHHH-HHHHHHhc
Confidence 5444 36666654
No 42
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=53.20 E-value=55 Score=28.07 Aligned_cols=77 Identities=17% Similarity=0.053 Sum_probs=52.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~L 258 (712)
++.+.|++++.++.-+..+.-.. ...++.+.++.+| ...+ +|+.|...+++++++--... -...+
T Consensus 61 ~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~-------~~~g--~~~~A~~~~~~al~~~p~~~---~~~~~ 125 (142)
T 2xcb_A 61 CRQSLGLYEQALQSYSYGALMDI---NEPRFPFHAAECH-------LQLG--DLDGAESGFYSARALAAAQP---AHEAL 125 (142)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCTHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHHTCG---GGHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC---CCcHHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHhCCCCc---chHHH
Confidence 56789999999999998886422 2234444444443 2333 58999999999998876433 25677
Q ss_pred HHHHHHHhHhhC
Q 005141 259 QAQIDETLEEIN 270 (712)
Q Consensus 259 q~eI~~~L~~L~ 270 (712)
..+++.-|..+.
T Consensus 126 ~~~~~~~l~~l~ 137 (142)
T 2xcb_A 126 AARAGAMLEAVT 137 (142)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777777654
No 43
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=52.93 E-value=92 Score=25.34 Aligned_cols=77 Identities=13% Similarity=0.062 Sum_probs=50.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~L 258 (712)
++...|+++..++.-+.+++-.. ...++.. .++.-.+..+ ++..|...+++++++-...+ -...
T Consensus 28 ~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~-------~la~~~~~~g--~~~~A~~~~~~al~~~~~~~----~~~~ 91 (115)
T 2kat_A 28 TYAEHEQFDAALPHLRAALDFDP---TYSVAWK-------WLGKTLQGQG--DRAGARQAWESGLAAAQSRG----DQQV 91 (115)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCHHHHH-------HHHHHHHHHT--CHHHHHHHHHHHHHHHHHHT----CHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHCC---CcHHHHH-------HHHHHHHHcC--CHHHHHHHHHHHHHhccccc----cHHH
Confidence 45678999999888888886321 1123333 3333333443 59999999999999987765 3556
Q ss_pred HHHHHHHhHhhCh
Q 005141 259 QAQIDETLEEINP 271 (712)
Q Consensus 259 q~eI~~~L~~L~P 271 (712)
..+|...|.+|..
T Consensus 92 ~~~l~~~l~~l~~ 104 (115)
T 2kat_A 92 VKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 6667666665543
No 44
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=46.32 E-value=54 Score=35.31 Aligned_cols=64 Identities=13% Similarity=0.136 Sum_probs=49.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHc
Q 005141 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~---~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~ 249 (712)
++...|+|++++.+.++.|.- .+|.. ..|+ |..+..||.-.+.++ +|+.|..++++|++++...
T Consensus 338 ~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~----a~~l~nLa~~~~~~g--~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 338 ACINLGLLEEALFYGTRTMEPYRIFFPGS-HPVR----GVQVMKVGKLQLHQG--MFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHSCSS-CHHH----HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhHHHHcCCC-ChHH----HHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHh
Confidence 567899999999999999953 34543 2443 455566677777775 5999999999999999986
No 45
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=45.16 E-value=93 Score=27.36 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=51.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~L 258 (712)
++.+.|++++.++.-+..+.-.. ...++.+.++.+| +..+ +++.|...+++++++-.... -+..+
T Consensus 64 ~~~~~g~~~~A~~~~~~al~l~p---~~~~~~~~lg~~~-------~~~g--~~~~A~~~~~~al~~~p~~~---~~~~~ 128 (148)
T 2vgx_A 64 CRQAMGQYDLAIHSYSYGAVMDI---XEPRFPFHAAECL-------LQXG--ELAEAESGLFLAQELIANXP---EFXEL 128 (148)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHST---TCTHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHTTCG---GGHHH
T ss_pred HHHHHhhHHHHHHHHHHHHhcCC---CCchHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHHCcCCC---cchHH
Confidence 56789999999999888886321 1233444444333 3343 58899999999988765432 35677
Q ss_pred HHHHHHHhHhhC
Q 005141 259 QAQIDETLEEIN 270 (712)
Q Consensus 259 q~eI~~~L~~L~ 270 (712)
+..++..|..++
T Consensus 129 ~~~~~~~l~~l~ 140 (148)
T 2vgx_A 129 STRVSSMLEAIK 140 (148)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHHH
Confidence 788887777665
No 46
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=43.35 E-value=47 Score=27.37 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=42.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcC
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g 250 (712)
++.+.|+++++++.-+..++-....... -..+.++..++.-.+..+ ++..|.+.+++++++.++.|
T Consensus 98 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~----~~~~~~~~~la~~~~~~g--~~~~A~~~~~~a~~~~~~~~ 163 (164)
T 3ro3_A 98 TYTLLQDYEKAIDYHLKHLAIAQELKDR----IGEGRACWSLGNAYTALG--NHDQAMHFAEKHLEISREVG 163 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHccch----HhHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHHHHHhC
Confidence 4567888888888888777532111111 122444555566666665 49999999999999887643
No 47
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=42.30 E-value=1.4e+02 Score=24.44 Aligned_cols=79 Identities=14% Similarity=0.049 Sum_probs=50.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~L 258 (712)
++..+|+++++++.-+.+++-.. ...++...++.++ +..+ +|..|...+++++++-...+..+--+.+
T Consensus 47 ~~~~~~~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~-------~~~~--~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 47 ALAKLMSFPEAIADCNKAIEKDP---NFVRAYIRKATAQ-------IAVK--EYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCHHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCC---CcHHHHHHHHHHH-------HHHh--CHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 45688999999999999987421 1233444444433 3343 5999999999999987544432234566
Q ss_pred HHHHHHHhHhh
Q 005141 259 QAQIDETLEEI 269 (712)
Q Consensus 259 q~eI~~~L~~L 269 (712)
...|.....++
T Consensus 115 ~~~l~~~~~~l 125 (126)
T 3upv_A 115 DQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 66666655544
No 48
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=41.60 E-value=31 Score=28.18 Aligned_cols=44 Identities=11% Similarity=0.029 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|...|++.... .....+..+..|.|+.-+|+.++|...+.
T Consensus 22 ~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 22 NASRALALFEELVET---------------DPDYVGTYYHLGKLYERLDRTDDAIDTYA 65 (100)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 457888888887654 11225788999999999999999999984
No 49
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=41.53 E-value=1.4e+02 Score=24.30 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=44.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcC
Q 005141 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~--~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g 250 (712)
++...|++++.++.-+..++-. .+.. ...+.++..++.-.+..+ +|+.|.+.+++++++.++.+
T Consensus 58 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~------~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~a~~~~~~~~ 123 (164)
T 3ro3_A 58 AYIFLGEFETASEYYKKTLLLARQLKDR------AVEAQSCYSLGNTYTLLQ--DYEKAIDYHLKHLAIAQELK 123 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHcc
Confidence 4567899999888888887532 1111 123444555666566664 59999999999999998875
No 50
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=39.96 E-value=81 Score=26.31 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=30.0
Q ss_pred HHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHc
Q 005141 214 ALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (712)
Q Consensus 214 ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~ 249 (712)
|.-|+++|+-.+.++ +|..|...++.|++++...
T Consensus 5 a~dc~~lG~~~~~~~--~y~~A~~W~~~Al~~~~~~ 38 (104)
T 2v5f_A 5 AEDCFELGKVAYTEA--DYYHTELWMEQALRQLDEG 38 (104)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcc--chHHHHHHHHHHHHhhhcc
Confidence 567999999999986 5999999999999998754
No 51
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=35.77 E-value=2.5e+02 Score=27.53 Aligned_cols=45 Identities=13% Similarity=0.256 Sum_probs=36.4
Q ss_pred chHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 370 ~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
....+|..+++++... . ....++...+|+|..-+|+.++|...|.
T Consensus 180 ~~~~eA~~~~~~~l~~----~-----------p~~~~~~~~la~~~~~~g~~~eA~~~l~ 224 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADK----C-----------SPTLLLLNGQAACHMAQGRWEAAEGVLQ 224 (291)
T ss_dssp THHHHHHHHHHHHHHH----S-----------CCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh----C-----------CCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5678899999988754 1 1236788899999999999999999984
No 52
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=35.09 E-value=1.5e+02 Score=25.96 Aligned_cols=65 Identities=23% Similarity=0.227 Sum_probs=45.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcC
Q 005141 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~--~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g 250 (712)
++.+.|++++.++.-++.++-. .+.. ....+.++..++.-.+..+ +|+.|...+++++++.++.+
T Consensus 75 ~~~~~g~~~~A~~~~~~al~~~~~~~~~-----~~~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 75 VERMAGNWDAARRCFLEERELLASLPED-----PLAASANAYEVATVALHFG--DLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHSCCC-----HHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCcc-----HHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhcc
Confidence 5668899999888888888632 2211 1223445555666666664 59999999999999988765
No 53
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=33.56 E-value=52 Score=27.23 Aligned_cols=44 Identities=7% Similarity=0.012 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|...|++..+. .....++.+..|.|..-+|+.++|...+.
T Consensus 42 ~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 85 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQ---------------FPNHQALRVFYAMVLYNLGRYEQGVELLL 85 (117)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 467888888887654 11226889999999999999999999884
No 54
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=33.50 E-value=1.6e+02 Score=32.33 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=47.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHc
Q 005141 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~---~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~ 249 (712)
++...|+|++++.+.++.|.- .+|... .|+ |.++-.||.-.+.++ +|+.|..++++|+.++++.
T Consensus 360 ~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H-p~~----a~~l~nLa~~~~~~G--~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 360 VLSYLQAYEEASHYARRMVDGYMKLYHHNN-AQL----GMAVMRAGLTNWHAG--HIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCTTC-HHH----HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHcCCCC-HHH----HHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHH
Confidence 667889999999999999953 345432 443 334445556666664 6999999999999999986
No 55
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=33.50 E-value=1.4e+02 Score=24.15 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=39.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~L 245 (712)
++.+.|+++.+++.-+.+++.........++.+.+|.++.. .+ ++..|...++++++.
T Consensus 48 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-------~g--~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 48 SYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-------EG--KNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-------TT--CHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-------cC--CHHHHHHHHHHHHHH
Confidence 45688999999999999887544444445656655555433 33 588888888877764
No 56
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=33.03 E-value=1e+02 Score=25.03 Aligned_cols=56 Identities=7% Similarity=-0.131 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
.|.-+.++...| -..+|...|++.... .....+.....|.|+.-+|+.++|...+.
T Consensus 22 ~~~lg~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 77 (115)
T 2kat_A 22 RFTLGKTYAEHE-------QFDAALPHLRAALDF---------------DPTYSVAWKWLGKTLQGQGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHcc-------CHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 444445554443 356788888877643 01225788899999999999999999984
No 57
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=32.83 E-value=1.4e+02 Score=24.57 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=38.8
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~L 245 (712)
++...|+++++++.-++.++-... ..++...++.++.. .+ +|..|.+.+++++++
T Consensus 36 ~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~-------~g--~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 36 TFRTLGEYRKAEAVLANGVKQFPN---HQALRVFYAMVLYN-------LG--RYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHH-------HT--CHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHH-------cC--CHHHHHHHHHHHHHh
Confidence 567899999999999999874221 25555555555433 32 488889999988875
No 58
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=32.11 E-value=54 Score=28.18 Aligned_cols=44 Identities=20% Similarity=0.229 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|...+++.... .....++++..|.|.+-+|+.++|..++.
T Consensus 67 ~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 67 LYEQALQSYSYGALM---------------DINEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhc---------------CCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456788888777643 11235788999999999999999999984
No 59
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=31.61 E-value=79 Score=24.86 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|...+++.... .....++....|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 62 (111)
T 2l6j_A 19 LYREAVHCYDQLITA---------------QPQNPVGYSNKAMALIKLGEYTQAIQMCQ 62 (111)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc---------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 356777777776543 01225788899999999999999999884
No 60
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=30.24 E-value=1.7e+02 Score=23.60 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=40.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~L 245 (712)
.+.+.|+++++++.-+.+++.........++.+.++.++. ..+ +|..|...+++++++
T Consensus 11 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-------~~~--~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 11 DALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-------ATR--NFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-------HTT--CHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-------Hhc--cHHHHHHHHHHHHHH
Confidence 4567899999999999988755444555566665555543 333 588888888887764
No 61
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=29.96 E-value=1.1e+02 Score=24.54 Aligned_cols=45 Identities=4% Similarity=-0.241 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 370 ~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
.-..+|...+++..... ....++....|.|..-+|+.++|...+.
T Consensus 64 ~~~~~A~~~~~~a~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 108 (133)
T 2lni_A 64 LEFQLALKDCEECIQLE---------------PTFIKGYTRKAAALEAMKDYTKAMDVYQ 108 (133)
T ss_dssp TCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhC---------------CCchHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 35678888888776531 1225788899999999999999999984
No 62
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=29.69 E-value=1.1e+02 Score=28.95 Aligned_cols=64 Identities=9% Similarity=0.138 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHh
Q 005141 349 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 428 (712)
Q Consensus 349 a~~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l 428 (712)
....|.-+++||- +++|..|++|-.+|+.+-...- .....|-..-.|+.+.-+|+.++|...+
T Consensus 32 ~~~~F~ya~~Lv~----S~~~~~~~~gI~lLe~ll~~~~-------------p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 32 KSTQFEYAWCLVR----SKYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp HHHHHHHHHHHHT----CSSHHHHHHHHHHHHHHHHHSC-------------HHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcCC-------------ccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 3447777788774 7889999999999999986510 1245789999999999999999999998
Q ss_pred c
Q 005141 429 G 429 (712)
Q Consensus 429 ~ 429 (712)
.
T Consensus 95 ~ 95 (152)
T 1pc2_A 95 R 95 (152)
T ss_dssp H
T ss_pred H
Confidence 4
No 63
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=29.55 E-value=1.9e+02 Score=24.46 Aligned_cols=60 Identities=15% Similarity=0.089 Sum_probs=40.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhh--cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005141 179 VLQEAGETEVVLRIGESLLRE--RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~--~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~L 245 (712)
++.++|+++++++.-+..|+- .....+ -.+|-+|..++.-....+ +|..|.+.+++++++
T Consensus 51 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~-----~~~a~~~~~lg~~~~~~~--~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 51 VYFEEKKFAECVQFCEKAVEVGRETRADY-----KLIAKAMSRAGNAFQKQN--DLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCH-----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHhCcccchhh-----HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhh
Confidence 567899999999999999852 222222 123445555555554554 599999999998763
No 64
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=28.48 E-value=4.1e+02 Score=25.65 Aligned_cols=65 Identities=11% Similarity=0.075 Sum_probs=46.0
Q ss_pred HHHHHhhhHHHHHHHHHHHhhh--cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcC
Q 005141 178 LVLQEAGETEVVLRIGESLLRE--RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (712)
Q Consensus 178 ~LLqElGe~~~vl~lg~~~Lq~--~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g 250 (712)
.+++..|++++.++.-++.+.- ..+.. -..|-++..++.-....+ +|+.|...+++|+++..+.|
T Consensus 45 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~a~~~~~lg~~~~~~g--~~~~A~~~~~~Al~l~~~~g 111 (292)
T 1qqe_A 45 TIYRLRKELNLAGDSFLKAADYQKKAGNE------DEAGNTYVEAYKCFKSGG--NSVNAVDSLENAIQIFTHRG 111 (292)
T ss_dssp HHHHHTTCTHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHcC
Confidence 4667888888888887777752 12221 134556667776665654 59999999999999988776
No 65
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=27.82 E-value=3.6e+02 Score=24.80 Aligned_cols=131 Identities=10% Similarity=0.029 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHcCCc-hhhHHHhhcccCCCCCCccccCCCccccchHHHH----
Q 005141 106 DGIRRAYEARISKPPQYGFSPDALISRRQILQAACETLANA-SSRREYNQGLADDHADTILTEVPWDKVPGALLVL---- 180 (712)
Q Consensus 106 eEIKkAYRkla~~~PDk~~s~~a~~~RfqlI~eAYeVLSDp-~~R~~YD~~L~~~~~~~~~lei~~~~~~GaL~LL---- 180 (712)
++-.+.|.+....+|+...... ..+ .+..+|.-++|. +-...|++.+...... ..++...+.=+.+..
T Consensus 21 ~~A~~~~~~~~~~~p~~~~~~~---a~~-~lg~~~~~~~~~~~A~~~~~~~l~~~P~~---~~~~~a~~~~g~~~~~~~~ 93 (225)
T 2yhc_A 21 RQAITQLEALDNRYPFGPYSQQ---VQL-DLIYAYYKNADLPLAQAAIDRFIRLNPTH---PNIDYVMYMRGLTNMALDD 93 (225)
T ss_dssp HHHHHHHHHHHHHCTTSTTHHH---HHH-HHHHHHHHTTCHHHHHHHHHHHHHHCTTC---TTHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCChHHHH---HHH-HHHHHHHhcCCHHHHHHHHHHHHHHCcCC---CcHHHHHHHHHHHHHhhhh
Confidence 4455667777777776543222 222 356777777773 3455666666433210 000111111122222
Q ss_pred -------------HHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHH-------HHhhHhhHHHHHcCCCchhhHhHHHH
Q 005141 181 -------------QEAGETEVVLRIGESLLRERLPKSFKQDVVLAMA-------LAYVDISRDAMAFNPPDYIGGCEMLE 240 (712)
Q Consensus 181 -------------qElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~A-------LA~~elarea~~~~~~~~~~aa~~Le 240 (712)
.+.|+++..++.=+.+++.........+...-++ -++..++.-.+.++ +|..|...++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~ 171 (225)
T 2yhc_A 94 SALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG--AWVAVVNRVE 171 (225)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHH
T ss_pred hhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--cHHHHHHHHH
Confidence 2367888888888888875433333333322221 12233444444443 4777777777
Q ss_pred HHHHH
Q 005141 241 RALKL 245 (712)
Q Consensus 241 ~al~L 245 (712)
++++.
T Consensus 172 ~~l~~ 176 (225)
T 2yhc_A 172 GMLRD 176 (225)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 66
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=27.41 E-value=82 Score=24.70 Aligned_cols=43 Identities=14% Similarity=0.027 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhCCCCcccccCccccccchhhhh-hhHHHHHHHHhhCChHHHHHHhc
Q 005141 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEME-FALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 372 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~D-v~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
..+|...++++.+. .....+ +.+..|.|+.-+|+.++|...+.
T Consensus 16 ~~~A~~~~~~al~~---------------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 59 (99)
T 2kc7_A 16 IENALQALEEFLQT---------------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQ 59 (99)
T ss_dssp HHHHHHHHHHHHHH---------------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 46788888777643 011246 88999999999999999999984
No 67
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=26.97 E-value=2.5e+02 Score=27.30 Aligned_cols=19 Identities=21% Similarity=0.258 Sum_probs=11.2
Q ss_pred hhhHhHHHHHHHHHHHHcC
Q 005141 232 YIGGCEMLERALKLLQEEG 250 (712)
Q Consensus 232 ~~~aa~~Le~al~LLq~~g 250 (712)
|..|...+++++++..+.|
T Consensus 323 ~~~A~~~~~~al~~~~~~~ 341 (406)
T 3sf4_A 323 HDQAMHFAEKHLEISREVG 341 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 5566666666666655544
No 68
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=26.30 E-value=77 Score=27.62 Aligned_cols=44 Identities=7% Similarity=-0.012 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|...+++.... .....++...+|.|++-+|+.++|...+.
T Consensus 26 ~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 69 (164)
T 3sz7_A 26 EYSKAIDLYTQALSI---------------APANPIYLSNRAAAYSASGQHEKAAEDAE 69 (164)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCcCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 456788888777643 11236889999999999999999999984
No 69
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=26.19 E-value=75 Score=27.96 Aligned_cols=44 Identities=20% Similarity=0.119 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
...+|...+++.... .....+..+..|.|++-+|+.++|...+.
T Consensus 70 ~~~~A~~~~~~al~l---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 113 (148)
T 2vgx_A 70 QYDLAIHSYSYGAVM---------------DIXEPRFPFHAAECLLQXGELAEAESGLF 113 (148)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhc---------------CCCCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 346777777776543 01225788999999999999999999984
No 70
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=25.35 E-value=1e+02 Score=23.30 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|...+++..... ....++....|.|..-+|+.++|..++.
T Consensus 24 ~~~~A~~~~~~a~~~~---------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 67 (91)
T 1na3_A 24 DYDEAIEYYQKALELD---------------PNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (91)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3567888887765430 1125778899999999999999999884
No 71
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=24.62 E-value=71 Score=28.94 Aligned_cols=56 Identities=11% Similarity=0.188 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
.|.-++++...| -..+|...|+++... .....+.....|.|+.-+|+.++|...+.
T Consensus 39 ~~~lg~~~~~~g-------~~~eA~~~~~~al~~---------------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 39 IYSYAYDFYNKG-------RIEEAEVFFRFLCIY---------------DFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 444445554443 456777777777643 11235777788888888888888888773
No 72
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=24.59 E-value=70 Score=28.97 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
...+|...+++.... . ....+.++..|.|++-+|+.++|...+.
T Consensus 85 ~~~~Ai~~~~~al~l----~-----------P~~~~~~~~lg~~~~~lg~~~eA~~~~~ 128 (151)
T 3gyz_A 85 QFQQAADLYAVAFAL----G-----------KNDYTPVFHTGQCQLRLKAPLKAKECFE 128 (151)
T ss_dssp CHHHHHHHHHHHHHH----S-----------SSCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh----C-----------CCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456777777777543 1 1225889999999999999999999984
No 73
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=24.45 E-value=5.1e+02 Score=25.42 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcC
Q 005141 186 TEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (712)
Q Consensus 186 ~~~vl~lg~~~Lq~~--~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g 250 (712)
++.++++-++.++-. .+. + -..+.++..++.-.+..+ +|+.|...+++++++..+.+
T Consensus 199 ~~~A~~~~~~al~~~~~~~~----~--~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~ 257 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDLGD----R--GAQGRACGNLGNTYYLLG--DFQAAIEHHQERLRIAREFG 257 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTC----H--HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCC----H--HHHHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHhcC
Confidence 777777766666421 111 1 123445555666666664 59999999999999988765
No 74
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=24.38 E-value=96 Score=25.52 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
.|.-+.++...| -..+|...+++.... .....+..+.+|.|...+|+.++|...+.
T Consensus 41 ~~~~a~~~~~~~-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 41 YSNRAAALAKLM-------SFPEAIADCNKAIEK---------------DPNFVRAYIRKATAQIAVKEYASALETLD 96 (126)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhc-------CHHHHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344455554443 456777777776543 11226788999999999999999999984
No 75
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=23.29 E-value=96 Score=27.01 Aligned_cols=56 Identities=11% Similarity=-0.075 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
.|.-+.++...| -..+|...+++.... .....+..+.+|.|+.-+|+.++|...+.
T Consensus 48 ~~~l~~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 48 LSNRAAAYSASG-------QHEKAAEDAELATVV---------------DPKYSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcc-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 444455555444 356788888777643 11226888999999999999999999984
No 76
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=23.08 E-value=8.9e+02 Score=27.73 Aligned_cols=153 Identities=12% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChH
Q 005141 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPD 257 (712)
Q Consensus 178 ~LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~ 257 (712)
.++++.|++++.++.-+++|+-.... +-|+..+|.-...++. |+.|.+.+++|+++ ... .++
T Consensus 17 ~~~~~~G~~~eAi~~~~kAl~l~P~~----------~~a~~nLg~~l~~~g~--~~eA~~~~~~Al~l---~P~---~~~ 78 (723)
T 4gyw_A 17 NIKREQGNIEEAVRLYRKALEVFPEF----------AAAHSNLASVLQQQGK--LQEALMHYKEAIRI---SPT---FAD 78 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCC----------HHHHHHHHHHHHHTTC--HHHHHHHHHHHHHH---CTT---CHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC----------HHHHHHHHHHHHHcCC--HHHHHHHHHHHHHh---CCC---CHH
Q ss_pred HHHHHHHHhHhhChhhHHHhhCCCCChhhHHHHHHHHHHHHHHHHHhCCCCCCccCCCCChHHHHHHHHhhhcHHHHHHh
Q 005141 258 LQAQIDETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNILWAVGGGGATAIAGGFTRESFMNEAFLRMTSAEQVKL 337 (712)
Q Consensus 258 Lq~eI~~~L~~L~P~riLELLalPl~~e~~~~Rq~GL~lLr~lL~~rgg~G~~~~~~gl~~~dFl~q~~~~LTa~EQvdL 337 (712)
....+-..+.++ .+-++++..++..|.-. +++
T Consensus 79 a~~nLg~~l~~~------------------g~~~~A~~~~~kAl~l~--------------P~~---------------- 110 (723)
T 4gyw_A 79 AYSNMGNTLKEM------------------QDVQGALQCYTRAIQIN--------------PAF---------------- 110 (723)
T ss_dssp HHHHHHHHHHHT------------------TCHHHHHHHHHHHHHHC--------------TTC----------------
T ss_pred HHHHHHHHHHHc------------------CCHHHHHHHHHHHHHhC--------------CCC----------------
Q ss_pred hhcCCCCCCchhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHh
Q 005141 338 FSATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLL 417 (712)
Q Consensus 338 F~~~~~~~s~~a~~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LL 417 (712)
....+.-+.++...| ...+|...+++.-+. .....+.+..++.|..-
T Consensus 111 -----------~~a~~~Lg~~~~~~g-------~~~eAi~~~~~Al~l---------------~P~~~~a~~~L~~~l~~ 157 (723)
T 4gyw_A 111 -----------ADAHSNLASIHKDSG-------NIPEAIASYRTALKL---------------KPDFPDAYCNLAHCLQI 157 (723)
T ss_dssp -----------HHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CSCCHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHcC-------CHHHHHHHHHHHHHh---------------CCCChHHHhhhhhHHHh
Q ss_pred hCChHHHHHHhc
Q 005141 418 VGKLDECRLWLG 429 (712)
Q Consensus 418 LGq~~eA~~~l~ 429 (712)
+|+.++|...+.
T Consensus 158 ~g~~~~A~~~~~ 169 (723)
T 4gyw_A 158 VCDWTDYDERMK 169 (723)
T ss_dssp TTCCTTHHHHHH
T ss_pred cccHHHHHHHHH
No 77
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=23.04 E-value=4.5e+02 Score=24.25 Aligned_cols=64 Identities=16% Similarity=0.255 Sum_probs=43.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcC
Q 005141 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (712)
Q Consensus 179 LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g 250 (712)
.+...|+++.++++-+++++.. +... ...+.++..++.-.+..+ +|..|.+.+++++++.++.+
T Consensus 14 ~~~~~g~~~~A~~~~~~al~~~-~~~~-----~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~ 77 (338)
T 3ro2_A 14 RLCKSGDCRAGVSFFEAAVQVG-TEDL-----KTLSAIYSQLGNAYFYLH--DYAKALEYHHHDLTLARTIG 77 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-CSCH-----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccHHHHHHHHHHHHhhC-cccH-----HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHhhccc
Confidence 4457789999998888888742 1111 122333444555555554 59999999999999988765
No 78
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=22.27 E-value=1.3e+02 Score=27.62 Aligned_cols=63 Identities=8% Similarity=0.134 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHh
Q 005141 349 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 428 (712)
Q Consensus 349 a~~~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l 428 (712)
....|.-|++||= ++.|+-|+++-.||+.|-..+- .....|-..-.|+.+.=||+.++|...+
T Consensus 35 ~~~~F~yAw~Lv~----S~~~~d~~~GI~lLe~l~~~~~-------------p~~~Rd~lY~LAvg~yklg~Y~~A~~~~ 97 (126)
T 1nzn_A 35 KSTQFEYAWCLVR----TRYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYV 97 (126)
T ss_dssp HHHHHHHHHHHTT----SSSHHHHHHHHHHHHHHTTTSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcCC-------------cchHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3448888888874 8999999999999999986511 1245799999999999999999999887
No 79
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.20 E-value=1.2e+02 Score=25.00 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|...+++..+.. ....++.+..|.|+..+|+.++|..++.
T Consensus 80 ~~~~A~~~~~~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 123 (148)
T 2dba_A 80 DYDKAETEASKAIEKD---------------GGDVKALYRRSQALEKLGRLDQAVLDLQ 123 (148)
T ss_dssp CHHHHHHHHHHHHHHT---------------SCCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhC---------------ccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4567888877765430 1125788999999999999999999984
No 80
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=22.12 E-value=82 Score=25.34 Aligned_cols=43 Identities=7% Similarity=0.033 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 372 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
..+|...+++.... .....++....|.|+..+|+.++|...+.
T Consensus 32 ~~~A~~~~~~al~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 74 (133)
T 2lni_A 32 YPQAMKHYTEAIKR---------------NPKDAKLYSNRAACYTKLLEFQLALKDCE 74 (133)
T ss_dssp SHHHHHHHHHHHTT---------------CTTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc---------------CCCcHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 46788888877643 11226888999999999999999999884
No 81
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=22.04 E-value=1.2e+02 Score=23.69 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|..++++..... ....+.....+.|..-.|+.++|..++.
T Consensus 24 ~~~~A~~~~~~~~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 67 (125)
T 1na0_A 24 DYDEAIEYYQKALELD---------------PNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (125)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC---------------cCcHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4667888888776431 1125678889999999999999999884
No 82
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=21.99 E-value=1.8e+02 Score=24.52 Aligned_cols=56 Identities=21% Similarity=0.112 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 352 ~YlaalAliA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
.|.-+.+++..| -..+|...|++..+. .....+..+..|.|..-+|+.++|...+.
T Consensus 20 ~~~~g~~~~~~g-------~~~~A~~~~~~al~~---------------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 75 (121)
T 1hxi_A 20 PMEEGLSMLKLA-------NLAEAALAFEAVCQK---------------EPEREEAWRSLGLTQAENEKDGLAIIALN 75 (121)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-------CHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 455566666555 356788888777653 12236888899999999999999998884
No 83
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=21.07 E-value=1.3e+02 Score=23.32 Aligned_cols=44 Identities=14% Similarity=0.003 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|...+++.... .....++....|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 62 (118)
T 1elw_A 19 NIDDALQCYSEAIKL---------------DPHNHVLYSNRSAAYAKKGDYQKAYEDGC 62 (118)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 356677777766543 01125778888999999999999988874
No 84
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=21.01 E-value=1.4e+02 Score=23.73 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|..++++..... ....++....|.|+...|+.++|...+.
T Consensus 19 ~~~~A~~~~~~a~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 62 (131)
T 1elr_A 19 DFDTALKHYDKAKELD---------------PTNMTYITNQAAVYFEKGDYNKCRELCE 62 (131)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4678888888776531 1125788899999999999999999984
No 85
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=20.66 E-value=5.8e+02 Score=24.66 Aligned_cols=57 Identities=14% Similarity=0.070 Sum_probs=35.6
Q ss_pred HHHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005141 177 LLVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (712)
Q Consensus 177 L~LLqElGe~~~vl~lg~~~Lq~~~~~~~~~Dv~Ls~ALA~~elarea~~~~~~~~~~aa~~Le~al~L 245 (712)
-..+...|+++.++++-++.++... ...++... ++.-.+..+ +|..|...+++++++
T Consensus 72 ~~~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~-------lg~~~~~~g--~~~~A~~~~~~al~~ 128 (365)
T 4eqf_A 72 GLKRLKEGDLPVTILFMEAAILQDP---GDAEAWQF-------LGITQAENE--NEQAAIVALQRCLEL 128 (365)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCT---TCHHHHHH-------HHHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCc---CCHHHHHH-------HHHHHHHCC--CHHHHHHHHHHHHhc
Confidence 3466688999999999988886421 12333333 333333343 477778788777764
No 86
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=20.50 E-value=1.7e+02 Score=26.80 Aligned_cols=67 Identities=10% Similarity=0.071 Sum_probs=53.7
Q ss_pred HHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHcCCCCCChHHHHHHHHHhHhhChhhHHHhhCCCC
Q 005141 213 MALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDLQAQIDETLEEINPRCVLELLGLPL 282 (712)
Q Consensus 213 ~ALA~~elarea~~~~~~~~~~aa~~Le~al~LLq~~g~~~l~p~Lq~eI~~~L~~L~P~riLELLalPl 282 (712)
-|+-++..|+.+++++ +++...+.+.+|+.++..=. .+|=++--.+|...|..|==|++-+|+.--+
T Consensus 35 gal~~l~~A~~ai~~~--d~~~k~~~i~KA~~Ii~~L~-~sLd~e~GgeiA~nL~~LY~y~~~~L~~An~ 101 (131)
T 3iqc_A 35 GILRFSSQAKRCIENE--DIEKKIYYINRVTDIFTELL-NILDYEKGGEVAVYLTGLYTHQIKVLTQANV 101 (131)
T ss_dssp HHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHH-HTBCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHH-HhcCCccccHHHHHHHHHHHHHHHHHHHhhh
Confidence 3677888899999985 69999999999999886532 3455666679999999999999988875443
No 87
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.06 E-value=1.9e+02 Score=23.67 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005141 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (712)
Q Consensus 371 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~a~C~LLLGq~~eA~~~l~ 429 (712)
-..+|..++++..... |......++....|.|+.-+|+.++|...+.
T Consensus 43 ~~~~A~~~~~~a~~~~------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 89 (148)
T 2dba_A 43 DYGGALAAYTQALGLD------------ATPQDQAVLHRNRAACHLKLEDYDKAETEAS 89 (148)
T ss_dssp CHHHHHHHHHHHHTSC------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHc------------ccchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4678888888877541 1111226788899999999999999999884
Done!