Query 005147
Match_columns 712
No_of_seqs 709 out of 5421
Neff 8.6
Searched_HMMs 46136
Date Thu Mar 28 18:50:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005147.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005147hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00181 protein SPA1-RELATED; 100.0 1.7E-67 3.8E-72 625.8 46.6 581 31-699 25-614 (793)
2 KOG0615 Serine/threonine prote 100.0 5.3E-40 1.2E-44 334.4 7.8 214 21-330 219-445 (475)
3 KOG0581 Mitogen-activated prot 100.0 4.5E-38 9.7E-43 318.7 10.6 208 27-330 126-343 (364)
4 KOG0661 MAPK related serine/th 100.0 2.2E-37 4.8E-42 320.4 11.2 210 27-330 57-299 (538)
5 KOG0588 Serine/threonine prote 100.0 3.7E-36 8E-41 321.9 14.0 211 23-330 57-271 (786)
6 KOG0591 NIMA (never in mitosis 100.0 2.6E-36 5.7E-41 293.1 10.8 197 27-316 67-275 (375)
7 KOG0593 Predicted protein kina 100.0 4.7E-36 1E-40 294.1 11.6 207 27-327 50-289 (396)
8 KOG0660 Mitogen-activated prot 100.0 2.2E-36 4.7E-41 305.2 8.1 239 7-335 46-323 (359)
9 KOG0575 Polo-like serine/threo 100.0 1.3E-35 2.7E-40 317.3 13.7 205 27-328 67-275 (592)
10 KOG0600 Cdc2-related protein k 100.0 3.3E-35 7.2E-40 306.5 13.4 236 4-330 138-408 (560)
11 KOG0659 Cdk activating kinase 100.0 6.8E-35 1.5E-39 281.7 12.7 234 6-333 25-292 (318)
12 KOG0198 MEKK and related serin 100.0 4.6E-35 9.9E-40 302.2 10.7 216 26-330 62-284 (313)
13 KOG0592 3-phosphoinositide-dep 100.0 1E-34 2.2E-39 305.2 12.6 219 27-330 122-346 (604)
14 KOG0583 Serine/threonine prote 100.0 1.7E-34 3.7E-39 309.7 14.3 203 27-327 68-280 (370)
15 KOG0033 Ca2+/calmodulin-depend 100.0 2.2E-34 4.7E-39 274.4 12.2 207 27-329 59-274 (355)
16 KOG0598 Ribosomal protein S6 k 100.0 3.1E-34 6.7E-39 290.8 12.8 208 27-330 74-289 (357)
17 KOG0663 Protein kinase PITSLRE 100.0 1.9E-34 4.1E-39 286.5 10.6 215 25-331 122-370 (419)
18 KOG0610 Putative serine/threon 100.0 1.9E-33 4.2E-38 287.1 16.8 276 19-333 118-403 (459)
19 KOG0578 p21-activated serine/t 100.0 9.4E-34 2E-38 300.6 13.7 206 27-329 319-530 (550)
20 KOG0595 Serine/threonine-prote 100.0 9.8E-34 2.1E-38 289.4 10.8 225 8-329 35-275 (429)
21 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-33 2.6E-38 292.2 11.1 217 26-330 156-380 (576)
22 KOG0605 NDR and related serine 100.0 2.4E-33 5.3E-38 295.2 11.9 256 24-330 189-453 (550)
23 KOG0594 Protein kinase PCTAIRE 100.0 7.2E-33 1.6E-37 280.9 13.6 220 24-333 56-313 (323)
24 KOG0658 Glycogen synthase kina 100.0 5.8E-34 1.3E-38 288.2 5.5 215 26-331 65-315 (364)
25 KOG0611 Predicted serine/threo 100.0 4.5E-33 9.8E-38 281.7 10.6 207 23-328 98-309 (668)
26 KOG0616 cAMP-dependent protein 100.0 9.2E-33 2E-37 270.7 11.4 200 28-329 94-304 (355)
27 KOG4721 Serine/threonine prote 100.0 2.8E-32 6E-37 286.2 13.9 202 25-323 159-365 (904)
28 KOG0604 MAP kinase-activated p 100.0 2.2E-32 4.8E-37 267.9 12.2 208 31-330 108-330 (400)
29 KOG0192 Tyrosine kinase specif 100.0 3.8E-32 8.2E-37 289.0 14.8 202 27-321 88-298 (362)
30 KOG0597 Serine-threonine prote 100.0 1.7E-32 3.7E-37 288.1 10.0 207 27-330 50-259 (808)
31 KOG0599 Phosphorylase kinase g 100.0 2E-32 4.3E-37 264.7 8.9 205 27-327 71-288 (411)
32 KOG0579 Ste20-like serine/thre 100.0 1.3E-31 2.9E-36 283.5 14.7 211 27-330 78-297 (1187)
33 KOG0596 Dual specificity; seri 100.0 2.7E-31 5.8E-36 279.3 15.2 208 31-331 412-636 (677)
34 KOG0582 Ste20-like serine/thre 100.0 1.6E-31 3.5E-36 275.0 13.0 231 8-330 51-301 (516)
35 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.7E-31 5.9E-36 281.1 13.8 212 25-330 50-296 (303)
36 cd07862 STKc_CDK6 Catalytic do 100.0 3.3E-31 7.1E-36 278.4 14.3 202 32-325 58-290 (290)
37 KOG0032 Ca2+/calmodulin-depend 100.0 9.9E-31 2.1E-35 280.6 17.5 205 27-329 84-300 (382)
38 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.8E-31 1E-35 277.1 14.1 205 27-325 52-288 (288)
39 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.3E-31 9.3E-36 283.8 13.6 214 27-330 48-298 (338)
40 KOG0667 Dual-specificity tyros 100.0 1.9E-31 4E-36 288.6 10.6 225 7-328 210-508 (586)
41 cd05612 STKc_PRKX_like Catalyt 100.0 6.9E-31 1.5E-35 276.4 13.4 203 27-329 50-261 (291)
42 PHA03212 serine/threonine kina 100.0 1.1E-30 2.3E-35 285.9 14.4 211 27-331 132-385 (391)
43 cd07868 STKc_CDK8 Catalytic do 100.0 1.6E-30 3.5E-35 276.8 15.3 210 27-325 47-317 (317)
44 PTZ00263 protein kinase A cata 100.0 9.6E-31 2.1E-35 280.3 12.6 202 27-328 67-277 (329)
45 KOG0589 Serine/threonine prote 100.0 5.9E-31 1.3E-35 278.3 10.5 208 27-328 52-264 (426)
46 cd05571 STKc_PKB Catalytic dom 100.0 1.2E-30 2.5E-35 278.9 12.9 206 27-329 44-258 (323)
47 KOG1035 eIF-2alpha kinase GCN2 100.0 3.6E-30 7.7E-35 292.3 17.0 201 55-327 669-876 (1351)
48 PTZ00426 cAMP-dependent protei 100.0 1.3E-30 2.8E-35 280.3 12.6 202 28-329 81-291 (340)
49 PHA03209 serine/threonine kina 100.0 2.1E-30 4.5E-35 280.8 14.1 206 27-327 106-356 (357)
50 cd07863 STKc_CDK4 Catalytic do 100.0 4.7E-30 1E-34 269.2 16.1 201 32-325 56-288 (288)
51 cd05585 STKc_YPK1_like Catalyt 100.0 2.1E-30 4.5E-35 275.6 13.5 205 27-328 42-253 (312)
52 PTZ00036 glycogen synthase kin 100.0 2.2E-30 4.8E-35 287.8 14.3 213 27-330 108-359 (440)
53 cd07848 STKc_CDKL5 Catalytic d 100.0 4.6E-30 1E-34 269.2 15.4 206 27-325 49-287 (287)
54 KOG0580 Serine/threonine prote 100.0 2.3E-30 5E-35 247.0 11.6 204 27-328 71-279 (281)
55 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.3E-30 7.2E-35 277.7 14.0 208 27-331 63-307 (343)
56 cd05631 STKc_GRK4 Catalytic do 100.0 3.5E-30 7.7E-35 270.1 13.3 208 27-330 49-269 (285)
57 PTZ00284 protein kinase; Provi 100.0 7.8E-30 1.7E-34 286.2 15.7 197 36-330 189-446 (467)
58 cd07875 STKc_JNK1 Catalytic do 100.0 9.2E-30 2E-34 276.6 15.7 208 27-330 72-326 (364)
59 KOG0201 Serine/threonine prote 100.0 3E-31 6.5E-36 273.1 3.5 207 27-329 60-270 (467)
60 cd05595 STKc_PKB_beta Catalyti 100.0 6.3E-30 1.4E-34 273.2 13.6 206 27-329 44-258 (323)
61 cd07876 STKc_JNK2 Catalytic do 100.0 1E-29 2.3E-34 275.6 15.4 208 27-330 69-323 (359)
62 KOG0584 Serine/threonine prote 100.0 2.1E-30 4.6E-35 277.7 9.4 207 25-328 88-302 (632)
63 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.7E-30 1.2E-34 274.8 12.7 202 28-328 51-263 (333)
64 KOG0607 MAP kinase-interacting 100.0 3E-30 6.5E-35 254.6 9.6 238 5-330 100-369 (463)
65 KOG0694 Serine/threonine prote 100.0 4.4E-30 9.6E-35 277.8 11.5 197 36-330 427-632 (694)
66 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-29 2.4E-34 271.8 13.8 205 27-328 44-257 (328)
67 PHA03211 serine/threonine kina 100.0 1.2E-29 2.6E-34 281.4 14.0 209 27-327 209-460 (461)
68 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.3E-30 1.6E-34 275.8 12.0 233 28-328 51-291 (350)
69 KOG4279 Serine/threonine prote 100.0 2.1E-30 4.4E-35 277.2 7.5 225 10-328 602-838 (1226)
70 cd05584 STKc_p70S6K Catalytic 100.0 1.4E-29 2.9E-34 270.6 13.6 205 27-328 49-262 (323)
71 cd07874 STKc_JNK3 Catalytic do 100.0 1.3E-29 2.8E-34 274.5 13.6 209 27-330 65-319 (355)
72 cd07867 STKc_CDC2L6 Catalytic 100.0 1.5E-29 3.3E-34 269.2 13.8 210 27-325 47-317 (317)
73 PHA03207 serine/threonine kina 100.0 1.6E-29 3.5E-34 277.3 14.0 211 27-330 135-383 (392)
74 cd05590 STKc_nPKC_eta Catalyti 100.0 1.9E-29 4.2E-34 269.1 13.9 197 35-328 53-259 (320)
75 cd06649 PKc_MEK2 Catalytic dom 100.0 1.8E-29 4E-34 270.6 13.8 205 27-329 52-308 (331)
76 cd05628 STKc_NDR1 Catalytic do 100.0 1.8E-29 3.9E-34 274.2 13.8 239 28-329 51-300 (363)
77 PTZ00267 NIMA-related protein 100.0 2E-29 4.2E-34 283.3 14.1 209 27-328 114-329 (478)
78 cd07853 STKc_NLK Catalytic dom 100.0 2.3E-29 5.1E-34 274.3 14.2 212 26-329 47-295 (372)
79 PTZ00283 serine/threonine prot 100.0 5.3E-29 1.2E-33 280.2 17.2 215 27-330 80-305 (496)
80 cd05614 STKc_MSK2_N N-terminal 100.0 1.7E-29 3.7E-34 271.0 12.4 207 27-328 53-273 (332)
81 KOG0666 Cyclin C-dependent kin 100.0 9.7E-30 2.1E-34 250.4 9.5 217 24-331 73-346 (438)
82 cd05575 STKc_SGK Catalytic dom 100.0 2.1E-29 4.6E-34 269.2 13.0 201 31-328 49-257 (323)
83 KOG0577 Serine/threonine prote 100.0 7E-30 1.5E-34 269.2 8.9 207 27-332 75-288 (948)
84 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.1E-29 6.6E-34 266.1 13.9 209 27-329 53-293 (309)
85 cd05599 STKc_NDR_like Catalyti 100.0 1.7E-29 3.6E-34 274.6 12.0 244 27-329 50-303 (364)
86 cd05588 STKc_aPKC Catalytic do 100.0 1.9E-29 4E-34 270.3 12.1 204 29-328 46-268 (329)
87 cd05626 STKc_LATS2 Catalytic d 100.0 2.6E-29 5.6E-34 274.8 13.3 254 27-328 50-311 (381)
88 KOG0197 Tyrosine kinases [Sign 100.0 2.2E-29 4.7E-34 267.1 12.3 200 27-320 250-455 (468)
89 cd05625 STKc_LATS1 Catalytic d 100.0 2.1E-29 4.5E-34 275.6 12.2 253 27-328 50-311 (382)
90 cd05596 STKc_ROCK Catalytic do 100.0 2.7E-29 5.9E-34 273.3 13.0 205 28-328 93-310 (370)
91 cd05594 STKc_PKB_alpha Catalyt 100.0 1.3E-29 2.8E-34 271.1 10.1 206 27-329 44-259 (325)
92 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.3E-29 1.1E-33 267.8 14.8 204 27-321 59-329 (338)
93 cd06625 STKc_MEKK3_like Cataly 100.0 6.6E-29 1.4E-33 256.7 14.8 207 27-325 53-263 (263)
94 KOG4717 Serine/threonine prote 100.0 7.1E-29 1.5E-33 257.9 14.8 227 4-330 39-278 (864)
95 cd05601 STKc_CRIK Catalytic do 100.0 1.6E-29 3.5E-34 270.9 10.1 207 27-328 50-269 (330)
96 cd05589 STKc_PKN Catalytic dom 100.0 7.7E-29 1.7E-33 264.9 15.2 200 31-328 55-263 (324)
97 cd05618 STKc_aPKC_iota Catalyt 100.0 3.5E-29 7.5E-34 268.2 12.4 202 31-328 48-268 (329)
98 cd07839 STKc_CDK5 Catalytic do 100.0 4.6E-29 1E-33 261.1 13.0 205 27-325 48-284 (284)
99 cd05620 STKc_nPKC_delta Cataly 100.0 4.9E-29 1.1E-33 265.5 13.4 199 34-329 52-255 (316)
100 cd05608 STKc_GRK1 Catalytic do 100.0 5.6E-29 1.2E-33 260.3 13.5 207 27-329 42-264 (280)
101 cd05621 STKc_ROCK2 Catalytic d 100.0 3.4E-29 7.5E-34 272.3 12.1 206 27-328 92-310 (370)
102 cd05592 STKc_nPKC_theta_delta 100.0 6.3E-29 1.4E-33 264.7 13.9 198 34-328 52-254 (316)
103 cd05591 STKc_nPKC_epsilon Cata 100.0 7E-29 1.5E-33 264.9 14.3 201 31-328 48-260 (321)
104 cd05607 STKc_GRK7 Catalytic do 100.0 6.8E-29 1.5E-33 259.2 13.7 207 28-329 43-261 (277)
105 cd05604 STKc_SGK3 Catalytic do 100.0 3.3E-29 7.2E-34 267.9 11.5 202 30-328 48-257 (325)
106 cd05619 STKc_nPKC_theta Cataly 100.0 8.9E-29 1.9E-33 263.5 14.7 199 34-329 52-255 (316)
107 PHA02988 hypothetical protein; 100.0 7.6E-29 1.6E-33 259.8 13.8 199 27-321 67-274 (283)
108 cd05582 STKc_RSK_N N-terminal 100.0 1.7E-29 3.8E-34 269.2 9.0 205 27-328 47-260 (318)
109 cd05629 STKc_NDR_like_fungal C 100.0 4E-29 8.6E-34 272.9 11.9 251 28-328 51-311 (377)
110 cd05598 STKc_LATS Catalytic do 100.0 2.5E-29 5.4E-34 274.5 10.0 248 27-328 50-307 (376)
111 KOG0603 Ribosomal protein S6 k 100.0 9.2E-29 2E-33 266.4 13.7 194 30-325 368-566 (612)
112 KOG4645 MAPKKK (MAP kinase kin 100.0 3.3E-30 7.3E-35 293.7 2.6 213 27-330 1283-1502(1509)
113 KOG0665 Jun-N-terminal kinase 100.0 4E-29 8.6E-34 247.8 9.7 226 6-326 39-314 (369)
114 cd05570 STKc_PKC Catalytic dom 100.0 9.6E-29 2.1E-33 263.5 13.2 202 30-328 47-258 (318)
115 cd05603 STKc_SGK2 Catalytic do 100.0 1.1E-28 2.4E-33 263.4 13.3 201 31-328 49-257 (321)
116 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-28 2.7E-33 263.4 13.6 204 28-328 50-263 (324)
117 cd05586 STKc_Sck1_like Catalyt 100.0 5.9E-29 1.3E-33 266.5 11.0 197 36-328 54-259 (330)
118 cd05602 STKc_SGK1 Catalytic do 100.0 1.1E-28 2.4E-33 263.9 12.9 201 31-328 49-257 (325)
119 KOG0662 Cyclin-dependent kinas 100.0 5.4E-29 1.2E-33 227.1 8.9 211 25-329 48-290 (292)
120 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.8E-28 3.9E-33 259.2 14.3 210 27-330 53-294 (301)
121 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.4E-29 2E-33 264.6 11.9 203 31-329 48-267 (327)
122 cd05605 STKc_GRK4_like Catalyt 100.0 1.9E-28 4.2E-33 256.9 14.0 207 27-329 49-268 (285)
123 KOG0983 Mitogen-activated prot 100.0 2.7E-29 5.9E-34 243.2 6.9 204 30-329 143-356 (391)
124 PLN00034 mitogen-activated pro 100.0 1.6E-28 3.5E-33 265.7 13.8 205 27-330 121-336 (353)
125 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-28 3E-33 263.9 13.1 206 27-329 52-306 (333)
126 cd05627 STKc_NDR2 Catalytic do 100.0 7.7E-29 1.7E-33 269.0 10.7 239 28-329 51-300 (360)
127 cd06643 STKc_SLK Catalytic dom 100.0 3.6E-28 7.9E-33 254.2 15.0 209 28-330 52-270 (282)
128 cd05597 STKc_DMPK_like Catalyt 100.0 2.8E-28 6.1E-33 261.4 14.2 207 28-328 51-272 (331)
129 cd06631 STKc_YSK4 Catalytic do 100.0 3.4E-28 7.3E-33 251.9 14.1 210 27-325 51-265 (265)
130 cd07861 STKc_CDK1_euk Catalyti 100.0 2.5E-28 5.4E-33 255.6 13.1 205 27-325 48-285 (285)
131 cd06637 STKc_TNIK Catalytic do 100.0 3.7E-28 8.1E-33 252.5 14.3 205 30-325 54-272 (272)
132 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.2E-28 9.1E-33 251.4 14.5 209 27-325 55-267 (267)
133 cd07855 STKc_ERK5 Catalytic do 100.0 2.2E-28 4.7E-33 262.6 12.8 219 27-333 53-305 (334)
134 PHA03210 serine/threonine kina 100.0 1.9E-28 4.1E-33 276.5 12.8 209 27-328 212-460 (501)
135 cd07832 STKc_CCRK Catalytic do 100.0 4.4E-28 9.6E-33 253.7 14.6 207 27-326 48-286 (286)
136 cd08529 STKc_FA2-like Catalyti 100.0 5.7E-28 1.2E-32 248.5 15.1 203 28-325 49-256 (256)
137 cd08223 STKc_Nek4 Catalytic do 100.0 5.5E-28 1.2E-32 248.9 14.7 205 27-325 48-257 (257)
138 cd05622 STKc_ROCK1 Catalytic d 100.0 2.6E-28 5.6E-33 265.6 12.9 205 28-328 93-310 (371)
139 cd08227 PK_STRAD_alpha Pseudok 100.0 3.1E-28 6.7E-33 260.6 13.1 214 28-328 49-313 (327)
140 cd06651 STKc_MEKK3 Catalytic d 100.0 4.2E-28 9.2E-33 251.5 13.6 208 27-326 53-265 (266)
141 cd05616 STKc_cPKC_beta Catalyt 100.0 4.3E-28 9.4E-33 259.0 14.0 202 31-329 53-264 (323)
142 cd06644 STKc_STK10_LOK Catalyt 100.0 1E-27 2.3E-32 252.2 16.6 211 28-333 59-280 (292)
143 cd07831 STKc_MOK Catalytic dom 100.0 8.6E-28 1.9E-32 251.0 15.3 203 28-325 47-282 (282)
144 cd05630 STKc_GRK6 Catalytic do 100.0 3.5E-28 7.6E-33 255.0 12.4 206 28-328 50-267 (285)
145 PTZ00266 NIMA-related protein 100.0 2.7E-28 5.9E-33 283.3 12.4 206 27-326 61-299 (1021)
146 cd05623 STKc_MRCK_alpha Cataly 100.0 3.9E-28 8.4E-33 260.4 12.8 206 29-328 52-272 (332)
147 cd05574 STKc_phototropin_like 100.0 9.9E-28 2.1E-32 255.3 15.5 239 27-330 50-297 (316)
148 cd07845 STKc_CDK10 Catalytic d 99.9 9.7E-28 2.1E-32 254.6 15.3 212 27-331 55-299 (309)
149 cd06612 STKc_MST1_2 Catalytic 99.9 8.3E-28 1.8E-32 247.3 14.2 202 29-325 49-256 (256)
150 cd05633 STKc_GRK3 Catalytic do 99.9 5.7E-28 1.2E-32 252.6 13.1 200 32-329 51-262 (279)
151 cd06645 STKc_MAP4K3 Catalytic 99.9 6.1E-28 1.3E-32 250.3 13.1 203 27-324 55-267 (267)
152 cd07860 STKc_CDK2_3 Catalytic 99.9 1.3E-27 2.8E-32 250.2 15.6 205 27-325 48-284 (284)
153 PF00069 Pkinase: Protein kina 99.9 1.8E-28 4E-33 252.6 8.9 203 28-325 48-260 (260)
154 cd07850 STKc_JNK Catalytic dom 99.9 9.2E-28 2E-32 259.8 14.4 205 27-327 64-316 (353)
155 KOG0669 Cyclin T-dependent kin 99.9 3.9E-28 8.5E-33 232.6 10.0 222 24-332 62-325 (376)
156 cd06654 STKc_PAK1 Catalytic do 99.9 6.9E-28 1.5E-32 254.2 13.0 207 28-330 67-278 (296)
157 cd06636 STKc_MAP4K4_6 Catalyti 99.9 9.4E-28 2E-32 251.0 13.9 205 30-325 64-282 (282)
158 cd07858 STKc_TEY_MAPK_plant Ca 99.9 5.4E-28 1.2E-32 259.9 12.2 214 27-332 53-301 (337)
159 cd06605 PKc_MAPKK Catalytic do 99.9 7.7E-28 1.7E-32 249.0 12.6 206 27-328 48-263 (265)
160 cd06655 STKc_PAK2 Catalytic do 99.9 1.2E-27 2.6E-32 252.4 14.0 208 27-330 65-277 (296)
161 cd06609 STKc_MST3_like Catalyt 99.9 2.1E-27 4.5E-32 247.4 15.7 207 28-331 49-260 (274)
162 cd07857 STKc_MPK1 Catalytic do 99.9 7.5E-28 1.6E-32 258.2 12.7 216 28-331 51-301 (332)
163 cd05632 STKc_GRK5 Catalytic do 99.9 1.3E-27 2.8E-32 250.7 14.0 208 27-330 49-269 (285)
164 cd08217 STKc_Nek2 Catalytic do 99.9 1.2E-27 2.6E-32 247.0 13.6 205 28-325 49-265 (265)
165 cd05572 STKc_cGK_PKG Catalytic 99.9 1.5E-27 3.2E-32 246.6 14.1 205 28-328 43-258 (262)
166 cd06652 STKc_MEKK2 Catalytic d 99.9 1.6E-27 3.5E-32 246.9 14.4 209 27-326 53-265 (265)
167 cd07841 STKc_CDK7 Catalytic do 99.9 1.7E-27 3.6E-32 251.2 14.7 210 28-331 52-291 (298)
168 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 2.9E-27 6.2E-32 248.2 16.3 210 27-331 48-275 (287)
169 cd05615 STKc_cPKC_alpha Cataly 99.9 1.3E-27 2.7E-32 255.5 13.8 202 30-328 52-263 (323)
170 cd07865 STKc_CDK9 Catalytic do 99.9 2E-27 4.2E-32 251.9 15.1 212 27-325 60-310 (310)
171 cd06611 STKc_SLK_like Catalyti 99.9 1.7E-27 3.6E-32 248.9 14.2 207 28-329 52-269 (280)
172 cd06639 STKc_myosinIIIB Cataly 99.9 1.9E-27 4.2E-32 249.9 14.7 206 30-326 70-291 (291)
173 cd08221 STKc_Nek9 Catalytic do 99.9 1.4E-27 3.1E-32 245.8 13.4 204 27-325 48-256 (256)
174 cd06656 STKc_PAK3 Catalytic do 99.9 7.1E-28 1.5E-32 254.3 11.3 208 27-330 65-277 (297)
175 cd06648 STKc_PAK_II Catalytic 99.9 2.1E-27 4.4E-32 249.2 14.6 207 28-331 66-278 (285)
176 cd06658 STKc_PAK5 Catalytic do 99.9 1.1E-27 2.4E-32 252.1 12.7 208 27-331 68-281 (292)
177 cd06633 STKc_TAO3 Catalytic do 99.9 6.2E-27 1.3E-31 249.0 18.5 204 27-329 70-280 (313)
178 KOG0586 Serine/threonine prote 99.9 4.7E-28 1E-32 259.5 9.8 207 27-331 104-315 (596)
179 cd06607 STKc_TAO Catalytic dom 99.9 3.5E-27 7.6E-32 250.1 16.5 205 27-330 64-275 (307)
180 cd05624 STKc_MRCK_beta Catalyt 99.9 7.6E-28 1.7E-32 258.0 11.4 207 28-328 51-272 (331)
181 KOG0986 G protein-coupled rece 99.9 6.3E-28 1.4E-32 248.4 9.9 208 27-330 234-454 (591)
182 KOG1989 ARK protein kinase fam 99.9 2.9E-28 6.2E-33 272.0 7.9 210 27-322 83-307 (738)
183 cd07843 STKc_CDC2L1 Catalytic 99.9 2.3E-27 5E-32 249.6 14.2 206 27-325 53-293 (293)
184 cd06617 PKc_MKK3_6 Catalytic d 99.9 3.5E-27 7.6E-32 246.6 15.2 205 31-330 53-269 (283)
185 cd05580 STKc_PKA Catalytic dom 99.9 3.1E-27 6.7E-32 248.4 14.9 202 28-329 51-261 (290)
186 cd06624 STKc_ASK Catalytic dom 99.9 2.6E-27 5.7E-32 245.7 13.8 205 27-325 54-268 (268)
187 cd07842 STKc_CDK8_like Catalyt 99.9 1.9E-27 4.2E-32 252.7 13.1 210 27-325 51-316 (316)
188 cd06619 PKc_MKK5 Catalytic dom 99.9 4.3E-27 9.2E-32 245.9 15.4 205 28-333 49-264 (279)
189 cd07844 STKc_PCTAIRE_like Cata 99.9 2.1E-27 4.6E-32 249.5 13.1 205 27-325 52-291 (291)
190 cd07880 STKc_p38gamma_MAPK12 C 99.9 2.2E-27 4.8E-32 255.7 13.6 209 27-331 63-307 (343)
191 cd07870 STKc_PFTAIRE2 Catalyti 99.9 3.5E-27 7.7E-32 247.9 14.8 205 27-325 52-291 (291)
192 cd06634 STKc_TAO2 Catalytic do 99.9 8E-27 1.7E-31 247.6 17.5 207 27-332 64-277 (308)
193 cd06659 STKc_PAK6 Catalytic do 99.9 2.8E-27 6.1E-32 249.7 13.7 207 27-330 67-279 (297)
194 PHA03390 pk1 serine/threonine- 99.9 3.6E-27 7.9E-32 244.9 14.3 194 35-327 66-267 (267)
195 cd07866 STKc_BUR1 Catalytic do 99.9 6E-27 1.3E-31 248.3 16.0 220 27-325 56-311 (311)
196 cd07851 STKc_p38 Catalytic dom 99.9 2.6E-27 5.6E-32 255.2 13.3 208 27-331 63-307 (343)
197 cd06638 STKc_myosinIIIA Cataly 99.9 4.1E-27 8.8E-32 246.6 14.4 205 30-325 66-286 (286)
198 cd07879 STKc_p38delta_MAPK13 C 99.9 3.1E-27 6.8E-32 254.5 13.8 207 27-331 63-306 (342)
199 cd05048 PTKc_Ror Catalytic Dom 99.9 3.3E-27 7.1E-32 246.9 13.6 202 28-322 58-279 (283)
200 cd06630 STKc_MEKK1 Catalytic d 99.9 4.2E-27 9.1E-32 243.9 14.3 209 27-326 52-268 (268)
201 cd07849 STKc_ERK1_2_like Catal 99.9 4.4E-27 9.6E-32 252.7 14.8 215 27-331 52-301 (336)
202 cd05108 PTKc_EGFR Catalytic do 99.9 3.3E-27 7.2E-32 251.4 13.6 203 27-322 58-264 (316)
203 cd06608 STKc_myosinIII_like Ca 99.9 2.7E-27 5.8E-32 245.9 12.6 206 28-325 52-275 (275)
204 cd05064 PTKc_EphR_A10 Catalyti 99.9 4E-27 8.7E-32 244.3 13.8 201 27-321 55-260 (266)
205 cd08220 STKc_Nek8 Catalytic do 99.9 5E-27 1.1E-31 241.4 14.4 203 27-325 48-256 (256)
206 cd06615 PKc_MEK Catalytic doma 99.9 3.5E-27 7.7E-32 250.3 13.6 204 27-328 48-293 (308)
207 cd05054 PTKc_VEGFR Catalytic d 99.9 4E-27 8.8E-32 253.0 14.1 204 28-322 60-329 (337)
208 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 7E-27 1.5E-31 244.9 15.6 209 27-331 48-271 (286)
209 KOG0612 Rho-associated, coiled 99.9 1.4E-27 3.1E-32 269.2 10.9 209 21-328 120-344 (1317)
210 cd05111 PTK_HER3 Pseudokinase 99.9 7E-27 1.5E-31 244.3 15.5 201 28-321 59-263 (279)
211 cd06613 STKc_MAP4K3_like Catal 99.9 4.3E-27 9.4E-32 242.8 13.7 203 27-324 49-262 (262)
212 cd07877 STKc_p38alpha_MAPK14 C 99.9 3.7E-27 8.1E-32 254.2 13.6 210 27-332 65-310 (345)
213 cd05606 STKc_beta_ARK Catalyti 99.9 4.9E-27 1.1E-31 245.4 13.9 202 31-329 50-262 (278)
214 cd05576 STKc_RPK118_like Catal 99.9 2.8E-27 6.1E-32 241.2 11.7 193 32-325 39-237 (237)
215 cd05058 PTKc_Met_Ron Catalytic 99.9 7.5E-27 1.6E-31 241.3 14.6 205 28-321 46-254 (262)
216 cd05104 PTKc_Kit Catalytic dom 99.9 4.5E-27 9.7E-32 256.4 13.5 203 27-321 87-369 (375)
217 cd07837 STKc_CdkB_plant Cataly 99.9 8.2E-27 1.8E-31 245.5 15.1 209 28-326 50-295 (295)
218 cd07834 STKc_MAPK Catalytic do 99.9 4.9E-27 1.1E-31 251.6 13.6 215 27-331 48-298 (330)
219 cd05084 PTKc_Fes Catalytic dom 99.9 7.5E-27 1.6E-31 239.9 14.3 202 27-321 42-248 (252)
220 cd06632 STKc_MEKK1_plant Catal 99.9 7E-27 1.5E-31 240.5 14.1 203 27-325 51-258 (258)
221 cd05106 PTKc_CSF-1R Catalytic 99.9 3.9E-27 8.4E-32 256.7 12.8 203 27-321 90-367 (374)
222 cd06635 STKc_TAO1 Catalytic do 99.9 1.7E-26 3.6E-31 246.1 17.4 205 28-330 75-285 (317)
223 cd06640 STKc_MST4 Catalytic do 99.9 7.4E-27 1.6E-31 243.7 14.4 207 27-330 51-261 (277)
224 cd08218 STKc_Nek1 Catalytic do 99.9 6.7E-27 1.5E-31 240.7 13.9 204 27-325 48-256 (256)
225 cd07854 STKc_MAPK4_6 Catalytic 99.9 2.6E-27 5.6E-32 255.2 11.2 213 28-330 52-308 (342)
226 cd05578 STKc_Yank1 Catalytic d 99.9 4.2E-27 9.1E-32 242.7 12.2 202 27-325 49-258 (258)
227 KOG4236 Serine/threonine prote 99.9 3.4E-28 7.3E-33 253.4 3.9 230 6-331 587-828 (888)
228 cd05115 PTKc_Zap-70 Catalytic 99.9 8.6E-27 1.9E-31 240.6 14.5 202 27-321 44-250 (257)
229 cd07847 STKc_CDKL1_4 Catalytic 99.9 8.6E-27 1.9E-31 243.9 14.4 204 27-325 49-286 (286)
230 cd08216 PK_STRAD Pseudokinase 99.9 9.7E-27 2.1E-31 247.4 15.0 216 27-329 48-302 (314)
231 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 8.1E-27 1.8E-31 240.8 13.9 195 27-322 48-256 (258)
232 cd05116 PTKc_Syk Catalytic dom 99.9 8.4E-27 1.8E-31 240.4 14.0 201 27-321 45-250 (257)
233 cd07836 STKc_Pho85 Catalytic d 99.9 8.1E-27 1.8E-31 244.0 14.0 205 27-325 47-284 (284)
234 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.2E-26 2.6E-31 241.2 15.2 205 28-325 58-272 (272)
235 cd06616 PKc_MKK4 Catalytic dom 99.9 6.2E-27 1.3E-31 245.6 13.0 207 28-329 52-274 (288)
236 KOG0671 LAMMER dual specificit 99.9 4E-27 8.7E-32 238.9 11.0 202 53-329 162-413 (415)
237 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 6.9E-27 1.5E-31 242.1 13.1 193 29-322 55-260 (262)
238 cd05052 PTKc_Abl Catalytic dom 99.9 1.3E-26 2.7E-31 240.0 15.0 200 28-321 52-257 (263)
239 cd05611 STKc_Rim15_like Cataly 99.9 9.9E-27 2.2E-31 240.2 14.0 198 31-328 50-257 (260)
240 cd06642 STKc_STK25-YSK1 Cataly 99.9 7.6E-27 1.6E-31 243.6 13.2 206 27-329 51-260 (277)
241 cd05113 PTKc_Btk_Bmx Catalytic 99.9 1E-26 2.2E-31 239.8 14.0 201 28-322 49-254 (256)
242 cd05577 STKc_GRK Catalytic dom 99.9 8.1E-27 1.8E-31 243.4 13.0 207 27-329 42-261 (277)
243 cd05118 STKc_CMGC Catalytic do 99.9 1.1E-26 2.4E-31 242.7 14.0 204 27-325 47-283 (283)
244 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 1.1E-26 2.3E-31 243.4 14.0 207 27-322 55-279 (284)
245 cd06646 STKc_MAP4K5 Catalytic 99.9 5.1E-27 1.1E-31 243.3 11.4 203 27-324 55-267 (267)
246 cd07835 STKc_CDK1_like Catalyt 99.9 1.7E-26 3.6E-31 241.6 15.2 204 28-325 48-283 (283)
247 cd05609 STKc_MAST Catalytic do 99.9 1.6E-26 3.4E-31 244.9 15.2 222 27-329 50-280 (305)
248 cd07838 STKc_CDK4_6_like Catal 99.9 2.4E-26 5.3E-31 240.6 16.4 202 32-325 55-287 (287)
249 cd00192 PTKc Catalytic domain 99.9 1.8E-26 3.9E-31 237.6 14.8 202 28-322 46-260 (262)
250 cd05579 STKc_MAST_like Catalyt 99.9 9.7E-27 2.1E-31 240.2 12.8 213 28-328 43-263 (265)
251 cd08226 PK_STRAD_beta Pseudoki 99.9 7.8E-27 1.7E-31 249.9 12.2 216 27-329 48-315 (328)
252 cd05062 PTKc_IGF-1R Catalytic 99.9 1.1E-26 2.4E-31 242.3 13.0 203 27-322 58-274 (277)
253 cd05109 PTKc_HER2 Catalytic do 99.9 1.7E-26 3.7E-31 241.2 14.3 202 27-321 58-263 (279)
254 cd05075 PTKc_Axl Catalytic dom 99.9 2.2E-26 4.7E-31 239.2 15.0 205 28-321 50-266 (272)
255 cd06618 PKc_MKK7 Catalytic dom 99.9 2.3E-26 5.1E-31 242.4 15.4 205 32-331 68-282 (296)
256 cd06606 STKc_MAPKKK Catalytic 99.9 1.6E-26 3.5E-31 237.2 13.8 208 27-325 48-260 (260)
257 cd05059 PTKc_Tec_like Catalyti 99.9 1.4E-26 3.1E-31 238.6 13.3 201 28-322 49-254 (256)
258 cd05093 PTKc_TrkB Catalytic do 99.9 1.7E-26 3.6E-31 242.5 14.0 202 27-321 56-274 (288)
259 cd05091 PTKc_Ror2 Catalytic do 99.9 1.8E-26 3.8E-31 241.5 14.1 202 27-321 57-278 (283)
260 cd05082 PTKc_Csk Catalytic dom 99.9 1.5E-26 3.2E-31 238.4 13.0 198 27-321 48-251 (256)
261 cd05114 PTKc_Tec_Rlk Catalytic 99.9 2.4E-26 5.2E-31 236.9 14.6 200 28-321 49-253 (256)
262 cd06626 STKc_MEKK4 Catalytic d 99.9 3.1E-26 6.7E-31 236.7 15.4 208 27-325 48-264 (264)
263 cd05122 PKc_STE Catalytic doma 99.9 1.7E-26 3.7E-31 236.1 13.2 202 27-324 46-253 (253)
264 cd06623 PKc_MAPKK_plant_like C 99.9 1.5E-26 3.2E-31 239.0 12.8 207 27-328 48-262 (264)
265 cd05094 PTKc_TrkC Catalytic do 99.9 2.1E-26 4.5E-31 242.2 14.1 201 28-321 57-277 (291)
266 cd06653 STKc_MEKK3_like_1 Cata 99.9 2.7E-26 5.8E-31 237.7 14.6 207 27-325 53-264 (264)
267 PTZ00024 cyclin-dependent prot 99.9 2.8E-26 6.1E-31 246.3 15.2 223 27-331 69-322 (335)
268 cd05096 PTKc_DDR1 Catalytic do 99.9 1.9E-26 4E-31 244.1 13.6 201 28-321 69-300 (304)
269 PLN00009 cyclin-dependent kina 99.9 2.3E-26 5.1E-31 242.1 13.9 209 27-329 50-291 (294)
270 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 2.3E-26 5.1E-31 240.9 13.8 206 27-329 52-273 (284)
271 cd06647 STKc_PAK_I Catalytic d 99.9 1.6E-26 3.5E-31 243.4 12.3 206 28-330 66-277 (293)
272 KOG2345 Serine/threonine prote 99.9 2.4E-27 5.1E-32 227.4 5.3 214 28-322 68-296 (302)
273 cd05040 PTKc_Ack_like Catalyti 99.9 4.3E-26 9.2E-31 234.9 15.1 202 27-321 45-253 (257)
274 cd07833 STKc_CDKL Catalytic do 99.9 4.3E-26 9.3E-31 238.9 15.2 206 27-325 49-288 (288)
275 cd08225 STKc_Nek5 Catalytic do 99.9 3.1E-26 6.8E-31 235.7 13.9 204 27-325 48-257 (257)
276 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 2.5E-26 5.4E-31 240.5 13.2 203 28-321 56-276 (283)
277 cd06610 STKc_OSR1_SPAK Catalyt 99.9 1.9E-26 4E-31 238.6 12.2 208 27-325 48-267 (267)
278 cd05053 PTKc_FGFR Catalytic do 99.9 2.3E-26 4.9E-31 241.9 12.9 202 28-322 65-287 (293)
279 cd08215 STKc_Nek Catalytic dom 99.9 3.6E-26 7.9E-31 234.7 13.9 204 27-325 48-258 (258)
280 cd08228 STKc_Nek6 Catalytic do 99.9 2.3E-26 5E-31 238.3 12.5 201 27-321 51-260 (267)
281 cd05061 PTKc_InsR Catalytic do 99.9 3.7E-26 8E-31 239.9 14.2 208 28-328 59-286 (288)
282 cd07852 STKc_MAPK15 Catalytic 99.9 3.1E-26 6.7E-31 246.2 13.9 215 27-330 55-303 (337)
283 cd05036 PTKc_ALK_LTK Catalytic 99.9 3.1E-26 6.7E-31 239.0 13.5 202 28-322 59-274 (277)
284 cd07840 STKc_CDK9_like Catalyt 99.9 4.3E-26 9.3E-31 238.5 14.6 206 28-325 48-287 (287)
285 cd05049 PTKc_Trk Catalytic dom 99.9 3.8E-26 8.2E-31 238.4 14.1 201 28-321 58-276 (280)
286 cd06917 STKc_NAK1_like Catalyt 99.9 3E-26 6.5E-31 238.9 13.2 206 27-330 48-263 (277)
287 cd07830 STKc_MAK_like Catalyti 99.9 5.6E-26 1.2E-30 237.5 15.3 204 27-325 46-283 (283)
288 PLN03225 Serine/threonine-prot 99.9 6E-26 1.3E-30 257.9 16.6 189 53-330 206-458 (566)
289 cd05060 PTKc_Syk_like Catalyti 99.9 4.4E-26 9.5E-31 235.0 14.2 200 28-321 46-250 (257)
290 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.7E-26 8.1E-31 235.4 13.7 193 27-321 50-256 (259)
291 cd05035 PTKc_Axl_like Catalyti 99.9 4.9E-26 1.1E-30 236.4 14.7 206 28-322 51-268 (273)
292 cd06614 STKc_PAK Catalytic dom 99.9 2.6E-26 5.7E-31 240.7 12.7 207 28-329 65-277 (286)
293 cd05090 PTKc_Ror1 Catalytic do 99.9 3.9E-26 8.6E-31 239.0 13.9 203 27-322 56-279 (283)
294 cd05072 PTKc_Lyn Catalytic dom 99.9 4E-26 8.8E-31 235.7 13.8 200 28-321 51-256 (261)
295 cd07864 STKc_CDK12 Catalytic d 99.9 6.1E-26 1.3E-30 239.7 15.1 208 28-325 56-302 (302)
296 cd07829 STKc_CDK_like Catalyti 99.9 5.5E-26 1.2E-30 237.2 14.5 204 28-325 48-282 (282)
297 cd05033 PTKc_EphR Catalytic do 99.9 5.7E-26 1.2E-30 235.4 14.5 202 28-322 55-261 (266)
298 cd07846 STKc_CDKL2_3 Catalytic 99.9 3.1E-26 6.8E-31 239.8 12.7 203 27-325 49-286 (286)
299 cd05089 PTKc_Tie1 Catalytic do 99.9 5.1E-26 1.1E-30 240.0 14.3 198 28-321 52-270 (297)
300 cd05068 PTKc_Frk_like Catalyti 99.9 6.1E-26 1.3E-30 234.5 14.5 200 28-321 51-256 (261)
301 cd05055 PTKc_PDGFR Catalytic d 99.9 5.1E-26 1.1E-30 240.7 14.2 202 28-321 88-296 (302)
302 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 5.2E-26 1.1E-30 234.9 13.9 200 27-321 50-255 (260)
303 cd05085 PTKc_Fer Catalytic dom 99.9 6.9E-26 1.5E-30 232.3 14.6 200 28-321 42-246 (250)
304 cd05071 PTKc_Src Catalytic dom 99.9 7.7E-26 1.7E-30 234.1 14.9 199 28-321 51-255 (262)
305 cd05032 PTKc_InsR_like Catalyt 99.9 5.7E-26 1.2E-30 236.7 13.9 202 27-321 58-273 (277)
306 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 5.7E-26 1.2E-30 243.2 14.2 211 27-335 58-301 (328)
307 KOG1006 Mitogen-activated prot 99.9 7.3E-28 1.6E-32 232.6 -0.4 231 4-330 90-335 (361)
308 cd05101 PTKc_FGFR2 Catalytic d 99.9 6E-26 1.3E-30 240.3 14.2 202 27-321 69-291 (304)
309 cd05105 PTKc_PDGFR_alpha Catal 99.9 4.3E-26 9.3E-31 249.9 13.4 156 78-321 233-392 (400)
310 KOG1026 Nerve growth factor re 99.9 1.9E-26 4.2E-31 256.1 10.6 201 27-320 538-756 (774)
311 cd08530 STKc_CNK2-like Catalyt 99.9 7.6E-26 1.6E-30 232.5 14.4 202 27-325 48-256 (256)
312 KOG1027 Serine/threonine prote 99.9 3.4E-26 7.5E-31 251.6 12.4 213 27-330 551-775 (903)
313 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 4.8E-26 1E-30 237.4 13.0 192 29-322 67-272 (274)
314 cd05069 PTKc_Yes Catalytic dom 99.9 7.4E-26 1.6E-30 233.8 14.3 199 28-321 51-255 (260)
315 KOG0574 STE20-like serine/thre 99.9 2.4E-27 5.1E-32 232.1 2.9 208 28-330 78-291 (502)
316 cd05083 PTKc_Chk Catalytic dom 99.9 5.8E-26 1.3E-30 233.7 13.4 195 28-321 49-249 (254)
317 cd06657 STKc_PAK4 Catalytic do 99.9 5.5E-26 1.2E-30 239.2 13.5 208 27-331 66-279 (292)
318 cd05088 PTKc_Tie2 Catalytic do 99.9 4.5E-26 9.7E-31 241.2 12.8 199 28-322 57-276 (303)
319 cd05041 PTKc_Fes_like Catalyti 99.9 7.4E-26 1.6E-30 232.2 13.9 201 28-321 42-247 (251)
320 cd08219 STKc_Nek3 Catalytic do 99.9 4E-26 8.7E-31 234.9 11.8 200 28-322 48-252 (255)
321 KOG1187 Serine/threonine prote 99.9 4.2E-26 9E-31 244.5 12.2 201 27-321 120-347 (361)
322 cd05066 PTKc_EphR_A Catalytic 99.9 8.1E-26 1.8E-30 234.5 14.0 202 28-321 55-261 (267)
323 cd08222 STKc_Nek11 Catalytic d 99.9 6.1E-26 1.3E-30 234.3 12.9 203 27-325 51-260 (260)
324 cd05098 PTKc_FGFR1 Catalytic d 99.9 5.2E-26 1.1E-30 241.1 12.6 201 28-321 73-294 (307)
325 cd05056 PTKc_FAK Catalytic dom 99.9 9.9E-26 2.1E-30 234.2 14.4 199 28-321 57-260 (270)
326 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.2E-25 2.6E-30 232.1 14.6 199 28-321 52-256 (261)
327 cd06641 STKc_MST3 Catalytic do 99.9 8E-26 1.7E-30 235.9 13.3 206 27-329 51-260 (277)
328 cd05047 PTKc_Tie Catalytic dom 99.9 9.1E-26 2E-30 234.6 13.6 198 28-321 45-263 (270)
329 cd05092 PTKc_TrkA Catalytic do 99.9 8.7E-26 1.9E-30 236.1 13.5 200 29-321 58-276 (280)
330 KOG0275 Conserved WD40 repeat- 99.9 1.4E-26 3E-31 227.0 6.8 196 473-703 192-390 (508)
331 PF07714 Pkinase_Tyr: Protein 99.9 2.2E-26 4.7E-31 237.9 8.7 201 28-321 51-257 (259)
332 cd05099 PTKc_FGFR4 Catalytic d 99.9 1.1E-25 2.4E-30 239.4 14.3 201 28-321 67-288 (314)
333 KOG0668 Casein kinase II, alph 99.9 2.7E-26 5.8E-31 217.2 8.4 209 26-330 80-330 (338)
334 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.1E-25 2.4E-30 235.6 13.9 206 27-321 54-278 (284)
335 cd06627 STKc_Cdc7_like Catalyt 99.9 1E-25 2.2E-30 231.2 13.3 203 27-325 48-254 (254)
336 cd05045 PTKc_RET Catalytic dom 99.9 1.1E-25 2.5E-30 236.4 14.0 201 28-321 53-281 (290)
337 cd05110 PTKc_HER4 Catalytic do 99.9 1E-25 2.2E-30 238.5 13.6 202 27-321 58-263 (303)
338 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.4E-25 2.9E-30 232.8 14.3 202 28-321 56-262 (268)
339 cd05112 PTKc_Itk Catalytic dom 99.9 1.1E-25 2.3E-30 231.7 13.2 201 28-322 49-254 (256)
340 KOG0690 Serine/threonine prote 99.9 2.9E-26 6.2E-31 226.8 8.4 204 28-330 218-432 (516)
341 KOG0194 Protein tyrosine kinas 99.9 2.5E-26 5.5E-31 247.7 8.6 200 27-321 210-415 (474)
342 KOG0193 Serine/threonine prote 99.9 1.9E-26 4.1E-31 245.8 7.4 200 28-321 438-648 (678)
343 cd08229 STKc_Nek7 Catalytic do 99.9 1.6E-25 3.4E-30 232.0 14.1 201 27-321 51-260 (267)
344 smart00219 TyrKc Tyrosine kina 99.9 1.4E-25 3.1E-30 230.6 13.6 200 28-321 51-256 (258)
345 KOG0614 cGMP-dependent protein 99.9 1.4E-26 3.1E-31 240.9 5.9 204 31-330 473-685 (732)
346 cd05051 PTKc_DDR Catalytic dom 99.9 1.4E-25 2.9E-30 236.3 13.5 201 28-321 69-292 (296)
347 cd05050 PTKc_Musk Catalytic do 99.9 1.6E-25 3.5E-30 235.0 13.8 202 27-321 57-284 (288)
348 cd05123 STKc_AGC Catalytic dom 99.9 1.7E-25 3.8E-30 229.1 13.6 201 28-325 43-250 (250)
349 cd05100 PTKc_FGFR3 Catalytic d 99.9 1.4E-25 3.1E-30 240.7 13.5 201 28-321 67-288 (334)
350 cd05103 PTKc_VEGFR2 Catalytic 99.9 1.6E-25 3.5E-30 241.2 13.9 205 27-322 59-335 (343)
351 cd05039 PTKc_Csk_like Catalyti 99.9 2.3E-25 5E-30 229.4 14.3 197 27-321 49-251 (256)
352 KOG0272 U4/U6 small nuclear ri 99.9 1.9E-25 4.1E-30 226.9 13.2 216 468-700 156-384 (459)
353 PHA02882 putative serine/threo 99.9 1.5E-25 3.2E-30 236.2 13.0 204 32-321 77-291 (294)
354 cd05097 PTKc_DDR_like Catalyti 99.9 2.3E-25 5E-30 234.7 14.4 201 28-321 67-291 (295)
355 KOG1095 Protein tyrosine kinas 99.9 7.5E-26 1.6E-30 260.2 11.4 202 27-321 744-956 (1025)
356 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.4E-25 5.3E-30 229.9 13.7 200 27-321 50-255 (260)
357 cd05044 PTKc_c-ros Catalytic d 99.9 2.6E-25 5.7E-30 230.7 14.0 202 27-321 48-265 (269)
358 cd05057 PTKc_EGFR_like Catalyt 99.9 3.1E-25 6.7E-30 231.7 14.5 201 27-321 58-263 (279)
359 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 3.9E-25 8.4E-30 228.9 15.0 201 27-321 51-260 (267)
360 cd05065 PTKc_EphR_B Catalytic 99.9 3.1E-25 6.6E-30 230.3 14.2 204 28-321 55-263 (269)
361 cd05034 PTKc_Src_like Catalyti 99.9 2.9E-25 6.2E-30 229.3 13.8 201 27-321 50-256 (261)
362 cd05581 STKc_PDK1 Catalytic do 99.9 1.3E-25 2.9E-30 233.9 11.1 220 29-325 52-280 (280)
363 cd05043 PTK_Ryk Pseudokinase d 99.9 3.2E-25 7E-30 231.6 13.9 203 27-321 57-271 (280)
364 cd05042 PTKc_Aatyk Catalytic d 99.9 3.2E-25 7E-30 230.2 13.6 201 28-321 45-265 (269)
365 cd05095 PTKc_DDR2 Catalytic do 99.9 3.9E-25 8.4E-30 233.1 14.2 201 28-321 69-292 (296)
366 cd05046 PTK_CCK4 Pseudokinase 99.9 4.4E-25 9.6E-30 229.8 14.0 201 28-322 58-272 (275)
367 cd05610 STKc_MASTL Catalytic d 99.9 6.6E-25 1.4E-29 255.4 17.0 100 27-131 53-153 (669)
368 cd05086 PTKc_Aatyk2 Catalytic 99.9 6.6E-25 1.4E-29 227.9 15.2 199 30-321 47-264 (268)
369 cd05613 STKc_MSK1_N N-terminal 99.9 4.6E-25 9.9E-30 231.7 13.9 207 28-329 54-275 (290)
370 cd05073 PTKc_Hck Catalytic dom 99.9 6.8E-25 1.5E-29 226.6 14.6 199 28-321 51-255 (260)
371 PRK13184 pknD serine/threonine 99.9 4.6E-25 1E-29 255.6 13.8 217 27-321 51-284 (932)
372 cd05074 PTKc_Tyro3 Catalytic d 99.9 8.9E-25 1.9E-29 227.2 14.6 205 27-321 50-267 (273)
373 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 8.6E-25 1.9E-29 227.1 14.3 202 27-321 44-265 (269)
374 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 7.4E-25 1.6E-29 229.0 13.3 205 28-321 56-278 (284)
375 KOG1290 Serine/threonine prote 99.9 1.9E-24 4.1E-29 224.9 15.8 84 35-118 139-224 (590)
376 KOG0608 Warts/lats-like serine 99.9 2.8E-25 6.1E-30 236.1 9.8 248 24-330 677-936 (1034)
377 KOG0695 Serine/threonine prote 99.9 5.2E-25 1.1E-29 218.5 11.0 209 32-336 305-530 (593)
378 cd05107 PTKc_PDGFR_beta Cataly 99.9 9.3E-25 2E-29 239.3 13.7 155 79-321 236-394 (401)
379 cd08528 STKc_Nek10 Catalytic d 99.9 1.6E-24 3.5E-29 224.8 14.4 193 33-321 64-265 (269)
380 cd05583 STKc_MSK_N N-terminal 99.9 1.5E-24 3.2E-29 227.7 13.3 208 28-330 54-274 (288)
381 KOG0272 U4/U6 small nuclear ri 99.9 2.1E-24 4.5E-29 219.3 13.7 188 491-689 258-458 (459)
382 smart00220 S_TKc Serine/Threon 99.9 1.4E-24 3E-29 220.3 12.2 203 27-325 36-244 (244)
383 KOG0670 U4/U6-associated splic 99.9 5E-25 1.1E-29 230.0 7.7 183 53-327 505-751 (752)
384 smart00750 KIND kinase non-cat 99.9 1.5E-24 3.2E-29 210.3 10.1 158 66-326 1-169 (176)
385 KOG0696 Serine/threonine prote 99.9 3E-24 6.4E-29 218.4 12.3 201 32-330 403-614 (683)
386 KOG0302 Ribosome Assembly prot 99.9 1.3E-23 2.9E-28 210.6 16.4 171 516-693 199-380 (440)
387 KOG0264 Nucleosome remodeling 99.9 1.1E-23 2.4E-28 216.6 15.9 171 517-693 166-349 (422)
388 KOG0263 Transcription initiati 99.9 6.8E-24 1.5E-28 231.0 15.0 167 522-700 445-616 (707)
389 KOG4257 Focal adhesion tyrosin 99.9 2E-24 4.4E-29 229.5 8.7 200 27-321 440-644 (974)
390 KOG0587 Traf2- and Nck-interac 99.9 5.4E-24 1.2E-28 235.4 12.4 208 31-329 69-289 (953)
391 KOG0664 Nemo-like MAPK-related 99.9 3.2E-25 6.9E-30 214.7 0.6 232 7-329 77-350 (449)
392 KOG1151 Tousled-like protein k 99.9 6.4E-24 1.4E-28 217.6 9.9 214 27-328 516-747 (775)
393 KOG0271 Notchless-like WD40 re 99.9 3.1E-23 6.8E-28 208.0 14.4 174 485-698 106-283 (480)
394 KOG0263 Transcription initiati 99.9 5E-23 1.1E-27 224.3 16.4 211 490-712 447-689 (707)
395 KOG0279 G protein beta subunit 99.9 1.3E-22 2.8E-27 196.5 17.1 172 519-700 54-231 (315)
396 KOG4278 Protein tyrosine kinas 99.9 1.4E-23 3E-28 222.6 11.3 200 28-321 313-518 (1157)
397 KOG0984 Mitogen-activated prot 99.9 6E-24 1.3E-28 198.6 6.4 164 30-288 97-271 (282)
398 KOG0271 Notchless-like WD40 re 99.9 1.9E-22 4.1E-27 202.5 16.6 206 490-699 153-447 (480)
399 KOG4250 TANK binding protein k 99.9 2.7E-23 5.9E-28 225.9 9.6 157 26-274 59-229 (732)
400 KOG1094 Discoidin domain recep 99.9 1.3E-23 2.8E-28 222.4 4.5 202 27-321 584-799 (807)
401 PLN03224 probable serine/threo 99.9 3.5E-22 7.7E-27 221.7 15.6 183 56-327 259-505 (507)
402 KOG0284 Polyadenylation factor 99.9 9.8E-23 2.1E-27 206.2 8.9 188 497-696 99-299 (464)
403 KOG0196 Tyrosine kinase, EPH ( 99.9 2.3E-23 5E-28 227.2 4.4 203 27-321 679-886 (996)
404 KOG0277 Peroxisomal targeting 99.9 3.5E-22 7.5E-27 191.1 11.1 192 504-703 79-277 (311)
405 PLN00113 leucine-rich repeat r 99.9 2.3E-22 5E-27 245.9 12.5 190 29-321 734-946 (968)
406 KOG1167 Serine/threonine prote 99.9 1.5E-22 3.3E-27 208.5 8.6 248 24-328 80-387 (418)
407 KOG1033 eIF-2alpha kinase PEK/ 99.9 4.8E-23 1E-27 218.4 4.9 183 56-325 330-515 (516)
408 KOG0199 ACK and related non-re 99.9 1.1E-22 2.5E-27 218.9 7.8 205 27-324 160-370 (1039)
409 KOG1152 Signal transduction se 99.9 7.2E-23 1.6E-27 216.6 5.6 147 27-270 615-770 (772)
410 KOG1407 WD40 repeat protein [F 99.9 4E-21 8.7E-26 184.5 16.0 210 488-700 14-270 (313)
411 KOG0286 G-protein beta subunit 99.9 6.9E-21 1.5E-25 185.6 17.5 204 483-700 44-268 (343)
412 KOG0273 Beta-transducin family 99.9 5.9E-21 1.3E-25 196.6 17.8 200 493-700 234-491 (524)
413 KOG0200 Fibroblast/platelet-de 99.9 1.5E-21 3.3E-26 224.1 15.0 201 28-321 351-574 (609)
414 KOG2052 Activin A type IB rece 99.9 7.2E-22 1.6E-26 204.0 9.5 228 5-320 231-497 (513)
415 KOG0286 G-protein beta subunit 99.8 5.1E-20 1.1E-24 179.6 19.7 175 520-700 47-226 (343)
416 KOG0576 Mitogen-activated prot 99.8 3.3E-21 7.1E-26 207.4 10.3 207 27-328 61-277 (829)
417 PTZ00421 coronin; Provisional 99.8 1.7E-19 3.7E-24 200.5 23.4 135 564-699 71-206 (493)
418 KOG0645 WD40 repeat protein [G 99.8 6.6E-20 1.4E-24 177.2 16.7 169 485-691 52-225 (312)
419 KOG0266 WD40 repeat-containing 99.8 1.3E-19 2.8E-24 201.7 21.6 195 494-700 159-373 (456)
420 KOG0285 Pleiotropic regulator 99.8 5E-20 1.1E-24 183.7 15.8 167 523-700 146-316 (460)
421 KOG3653 Transforming growth fa 99.8 6.8E-21 1.5E-25 198.2 9.8 221 8-319 233-496 (534)
422 KOG0315 G-protein beta subunit 99.8 2.4E-19 5.2E-24 171.2 19.3 202 493-699 39-296 (311)
423 KOG1025 Epidermal growth facto 99.8 3.5E-21 7.5E-26 210.9 6.3 201 27-321 747-952 (1177)
424 KOG1024 Receptor-like protein 99.8 1.2E-20 2.5E-25 191.6 9.2 205 26-321 335-550 (563)
425 cd00180 PKc Catalytic domain o 99.8 3.7E-20 8.1E-25 182.8 11.6 173 27-323 40-215 (215)
426 KOG0313 Microtubule binding pr 99.8 1.5E-19 3.3E-24 181.9 15.8 191 492-691 191-418 (423)
427 KOG0265 U5 snRNP-specific prot 99.8 1.7E-19 3.7E-24 176.6 15.6 193 489-694 42-249 (338)
428 KOG0279 G protein beta subunit 99.8 5.4E-19 1.2E-23 171.6 17.0 168 522-699 9-188 (315)
429 KOG0266 WD40 repeat-containing 99.8 1E-18 2.2E-23 194.6 20.6 157 528-695 159-322 (456)
430 KOG0295 WD40 repeat-containing 99.8 9.9E-19 2.1E-23 175.2 17.3 186 472-700 174-373 (406)
431 PTZ00421 coronin; Provisional 99.8 3.5E-18 7.5E-23 190.1 22.0 167 522-698 69-252 (493)
432 KOG0284 Polyadenylation factor 99.8 1.3E-19 2.9E-24 183.7 9.7 201 490-700 134-346 (464)
433 KOG0293 WD40 repeat-containing 99.8 7.1E-19 1.5E-23 178.4 13.9 199 491-691 221-513 (519)
434 PTZ00420 coronin; Provisional 99.8 1E-17 2.2E-22 187.4 24.1 169 519-698 65-256 (568)
435 KOG0276 Vesicle coat complex C 99.8 4.5E-19 9.8E-24 187.9 12.4 152 537-700 113-266 (794)
436 KOG0590 Checkpoint kinase and 99.8 9.2E-20 2E-24 206.8 7.1 213 27-330 370-593 (601)
437 KOG0264 Nucleosome remodeling 99.8 2.8E-18 6E-23 177.0 16.9 169 516-691 215-404 (422)
438 KOG0285 Pleiotropic regulator 99.8 4.1E-18 8.8E-23 170.2 17.1 199 490-699 147-397 (460)
439 KOG0319 WD40-repeat-containing 99.8 2.1E-18 4.6E-23 186.5 15.6 174 522-700 359-544 (775)
440 KOG0282 mRNA splicing factor [ 99.8 5.8E-19 1.3E-23 182.7 10.5 171 522-702 208-383 (503)
441 KOG0277 Peroxisomal targeting 99.8 7.8E-18 1.7E-22 161.4 15.8 168 528-703 60-233 (311)
442 KOG0313 Microtubule binding pr 99.8 1.2E-17 2.6E-22 168.3 17.5 178 520-699 136-385 (423)
443 KOG0296 Angio-associated migra 99.8 2.5E-17 5.3E-22 165.4 19.0 170 520-700 56-229 (399)
444 KOG1332 Vesicle coat complex C 99.8 3.2E-18 7E-23 163.2 11.9 169 519-691 47-241 (299)
445 PTZ00420 coronin; Provisional 99.8 4.7E-17 1E-21 182.0 22.7 134 564-699 70-205 (568)
446 KOG0281 Beta-TrCP (transducin 99.8 1.2E-18 2.7E-23 173.0 8.2 171 522-709 231-405 (499)
447 KOG0319 WD40-repeat-containing 99.8 8.5E-18 1.8E-22 181.9 15.2 202 489-700 360-586 (775)
448 KOG0640 mRNA cleavage stimulat 99.8 7.7E-18 1.7E-22 165.3 12.9 208 476-700 102-344 (430)
449 KOG1345 Serine/threonine kinas 99.7 1.1E-18 2.3E-23 169.9 6.7 181 35-313 78-275 (378)
450 KOG0273 Beta-transducin family 99.7 3.5E-17 7.7E-22 168.9 18.2 169 529-701 236-450 (524)
451 KOG4158 BRPK/PTEN-induced prot 99.7 3.9E-18 8.5E-23 173.8 10.9 213 20-321 259-512 (598)
452 KOG0265 U5 snRNP-specific prot 99.7 2E-17 4.4E-22 162.2 15.3 176 518-706 37-218 (338)
453 KOG0291 WD40-repeat-containing 99.7 3E-17 6.6E-22 177.7 18.1 188 495-693 308-510 (893)
454 KOG0278 Serine/threonine kinas 99.7 3.3E-17 7.1E-22 156.6 16.0 194 490-696 96-302 (334)
455 KOG0276 Vesicle coat complex C 99.7 1.5E-17 3.3E-22 176.4 13.5 157 537-705 71-228 (794)
456 PLN00181 protein SPA1-RELATED; 99.7 1.6E-16 3.4E-21 189.8 24.0 191 491-693 480-692 (793)
457 KOG0281 Beta-TrCP (transducin 99.7 5.6E-18 1.2E-22 168.4 7.8 157 519-694 268-431 (499)
458 KOG0645 WD40 repeat protein [G 99.7 2.3E-16 4.9E-21 152.9 18.3 162 521-691 7-180 (312)
459 KOG0292 Vesicle coat complex C 99.7 4.7E-17 1E-21 178.5 14.7 153 527-691 8-165 (1202)
460 KOG0291 WD40-repeat-containing 99.7 1.7E-16 3.6E-21 172.0 18.7 203 489-700 345-621 (893)
461 KOG0295 WD40 repeat-containing 99.7 6.7E-17 1.5E-21 162.2 13.9 169 521-700 143-331 (406)
462 KOG0303 Actin-binding protein 99.7 1E-16 2.2E-21 162.3 15.0 140 563-705 76-216 (472)
463 KOG0310 Conserved WD40 repeat- 99.7 2E-16 4.4E-21 164.4 17.7 192 496-699 70-276 (487)
464 smart00221 STYKc Protein kinas 99.7 3E-17 6.4E-22 164.7 11.3 166 28-286 47-218 (225)
465 KOG0305 Anaphase promoting com 99.7 1.8E-16 3.9E-21 170.8 16.3 188 494-693 217-463 (484)
466 KOG0308 Conserved WD40 repeat- 99.7 1.1E-16 2.4E-21 171.0 13.6 176 521-700 66-252 (735)
467 KOG0283 WD40 repeat-containing 99.7 7.2E-17 1.6E-21 178.0 12.4 128 566-696 265-445 (712)
468 KOG0641 WD40 repeat protein [G 99.7 7.6E-16 1.6E-20 145.1 17.3 200 492-696 87-307 (350)
469 KOG0269 WD40 repeat-containing 99.7 7.2E-17 1.6E-21 175.5 11.8 154 532-694 91-253 (839)
470 KOG0282 mRNA splicing factor [ 99.7 1.8E-16 3.8E-21 164.5 14.1 208 476-689 240-503 (503)
471 KOG0289 mRNA splicing factor [ 99.7 8.7E-15 1.9E-19 150.0 25.7 171 521-700 254-428 (506)
472 KOG0318 WD40 repeat stress pro 99.7 1.2E-15 2.6E-20 159.5 19.5 215 470-703 42-277 (603)
473 KOG0315 G-protein beta subunit 99.7 4.1E-16 9E-21 149.2 14.0 149 538-700 15-163 (311)
474 KOG0283 WD40 repeat-containing 99.7 5.8E-16 1.3E-20 170.9 17.2 171 517-699 358-540 (712)
475 KOG0269 WD40 repeat-containing 99.7 1.7E-16 3.6E-21 172.6 12.7 173 522-703 127-308 (839)
476 KOG0310 Conserved WD40 repeat- 99.7 3.2E-16 6.9E-21 162.9 14.1 163 530-701 28-195 (487)
477 KOG0647 mRNA export protein (c 99.7 3.8E-16 8.2E-21 153.4 13.2 125 567-699 26-153 (347)
478 KOG0300 WD40 repeat-containing 99.7 2E-16 4.3E-21 155.7 10.9 186 523-712 143-365 (481)
479 KOG0267 Microtubule severing p 99.7 9.5E-17 2.1E-21 173.2 8.7 167 519-696 61-231 (825)
480 KOG0270 WD40 repeat-containing 99.7 7.3E-16 1.6E-20 158.5 14.6 162 525-694 240-407 (463)
481 KOG0290 Conserved WD40 repeat- 99.7 6.5E-16 1.4E-20 150.9 13.4 161 526-692 148-319 (364)
482 cd00200 WD40 WD40 domain, foun 99.7 6.9E-15 1.5E-19 150.9 21.5 199 490-699 5-215 (289)
483 KOG0316 Conserved WD40 repeat- 99.7 1.6E-15 3.6E-20 144.0 15.1 166 521-700 10-182 (307)
484 KOG0274 Cdc4 and related F-box 99.7 2E-15 4.3E-20 168.4 17.1 161 523-699 244-409 (537)
485 KOG0292 Vesicle coat complex C 99.6 1.5E-15 3.3E-20 166.8 15.4 176 520-699 85-288 (1202)
486 cd00200 WD40 WD40 domain, foun 99.6 1.5E-14 3.2E-19 148.4 22.0 167 523-700 4-174 (289)
487 KOG0640 mRNA cleavage stimulat 99.6 1.1E-15 2.3E-20 150.3 12.6 182 513-704 97-304 (430)
488 KOG0643 Translation initiation 99.6 1.1E-14 2.5E-19 140.8 18.7 209 488-700 4-229 (327)
489 KOG0606 Microtubule-associated 99.6 3.7E-16 8E-21 177.1 9.7 209 27-331 108-324 (1205)
490 KOG0973 Histone transcription 99.6 3.1E-15 6.7E-20 169.1 16.8 206 490-699 65-320 (942)
491 KOG0316 Conserved WD40 repeat- 99.6 1.7E-15 3.8E-20 143.9 12.4 121 565-694 14-134 (307)
492 KOG0296 Angio-associated migra 99.6 7.4E-15 1.6E-19 147.8 17.5 197 489-691 101-398 (399)
493 KOG0306 WD40-repeat-containing 99.6 1.9E-15 4.1E-20 163.8 14.0 145 538-696 525-669 (888)
494 KOG0772 Uncharacterized conser 99.6 1E-15 2.2E-20 159.6 11.2 129 566-697 266-400 (641)
495 KOG1240 Protein kinase contain 99.6 7.2E-17 1.6E-21 182.8 2.8 200 32-322 75-291 (1431)
496 KOG4283 Transcription-coupled 99.6 6.7E-15 1.5E-19 143.9 15.5 128 566-701 99-230 (397)
497 KOG1407 WD40 repeat protein [F 99.6 4.2E-15 9.1E-20 143.4 13.8 164 523-699 15-227 (313)
498 KOG0302 Ribosome Assembly prot 99.6 9.1E-15 2E-19 147.5 15.7 164 518-687 247-435 (440)
499 COG0515 SPS1 Serine/threonine 99.6 3.7E-15 7.9E-20 157.1 13.2 212 29-328 48-281 (384)
500 KOG2445 Nuclear pore complex c 99.6 2.3E-14 5E-19 141.3 17.4 208 490-699 9-329 (361)
No 1
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1.7e-67 Score=625.85 Aligned_cols=581 Identities=65% Similarity=1.018 Sum_probs=426.0
Q ss_pred eeccCCC-CCcccccccc---cccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 31 ELTHGDH-LRNQGGLSGV---CENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 31 ~l~~~~H-~ni~~~~~~~---~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
-++.+.| +||+.+++.+ ..+......++.++|+.+++|.+||..+.+.+++.+++.|++||+.||+|||++||+||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHr 104 (793)
T PLN00181 25 GSKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVH 104 (793)
T ss_pred ccchhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 3556777 6777777732 12233345788899999999999997666679999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+..|.+|++|||++...+.+. ...+++.|||+++.........
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~--------------------------~~~~ki~DfG~a~~~~~~~~~~-- 156 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDE--------------------------DATTKSREIGSSRREEILSERR-- 156 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccc--------------------------cCcccccccccccccccccccc--
Confidence 999999999999999999999997654321 1234567998876421100000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
. ..........++......+||++|||||++.+..|+.++|||||||+||||+
T Consensus 157 ---------------------~------~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl 209 (793)
T PLN00181 157 ---------------------I------EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELF 209 (793)
T ss_pred ---------------------h------hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHh
Confidence 0 0000111122333334468999999999999999999999999999999999
Q ss_pred CCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchHHHHHHHHHHhhhh
Q 005147 267 CPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQID 346 (712)
Q Consensus 267 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~e~~~~~~~~e~~~ 346 (712)
+|+.+.......+..+.....|+......+....++.+||.++|.+||++.|+|+||||......+.+++......+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~ 289 (793)
T PLN00181 210 CPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIE 289 (793)
T ss_pred hCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhh
Confidence 98877665555555565555666555566777799999999999999999999999999986555555455445555556
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHhhhhcHHHHHHHHHHHHhhCCCCcchhcccccCCCCCCCCccccCCCCCccc
Q 005147 347 EEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATM 426 (712)
Q Consensus 347 ~~e~l~~fl~~~~~~k~~~~~~lq~el~~Le~Di~eve~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (712)
+.+.+++++...++++++++.+++.++++|+.||+++++|+......+... ....
T Consensus 290 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~r~~~~~~~~~~~-------------------------~~~~ 344 (793)
T PLN00181 290 EQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQKGSDV-------------------------RSFL 344 (793)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccc-------------------------cccc
Confidence 667778888888899999999999999999999999998665432211110 1122
Q ss_pred CcccccccccccccccccccccccccccCCCCCcccchhhhhhhhhhHhHHHHHHHhhccCCCCCCC---CCccc-cccc
Q 005147 427 GSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVR-HSQL 502 (712)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~y~~~~~~~~~~~~---~~~~~-~~~~ 502 (712)
..++++..+..+...++.... ..+.......+.+++++|||++|++|+++||.+|++....+. ++..+ +...
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (793)
T PLN00181 345 ASRKRIRQGAETLAAEEENDD----NSSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSAL 420 (793)
T ss_pred ccchhhhccccchhhcccccc----ccccccccccccchhhhHHHHHHHHHHHHHhhhhhcccccccccccccccccccc
Confidence 334444443322221111110 000012234567788999999999999999999986533211 11111 2333
Q ss_pred CCCCCCCCccccCCCCCCceeeccCC-CccceecccCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCC
Q 005147 503 SSDGRTSKPLVNERSSINNLGSKEGY-SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE 581 (712)
Q Consensus 503 ~~~g~~~~~~~~~~~~~~~~~l~gh~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~ 581 (712)
+.+|++.. ..+..+...-.+.+ .......|+.+|.+|++++|+..+.++...++.+++.+|.+.|++++|+|+++
T Consensus 421 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~ 496 (793)
T PLN00181 421 SENGRSSE----KSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGE 496 (793)
T ss_pred cccccccc----ccccccccccccccccccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCC
Confidence 33444430 00101101001111 11236678889999999999999999988888899999999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC
Q 005147 582 LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHER 661 (712)
Q Consensus 582 ~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~ 661 (712)
+|||||.|++|+|||+..........+.++....+...|.+++|+|+++.+||+|+.||+|+|||+.+++.+..+.+|.+
T Consensus 497 ~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~ 576 (793)
T PLN00181 497 FFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEK 576 (793)
T ss_pred EEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCC
Confidence 99999999999999987543333444556667777889999999998889999999999999999999999999999999
Q ss_pred cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 662 RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 662 ~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.|++++|+|.++.+|+|||.|++|++||++++.++.++
T Consensus 577 ~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~ 614 (793)
T PLN00181 577 RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 614 (793)
T ss_pred CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 99999999878999999999999999999998877654
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-40 Score=334.38 Aligned_cols=214 Identities=20% Similarity=0.213 Sum_probs=166.5
Q ss_pred cceeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 21 ~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
..++-.++..+|+.++|||||++++ +|+.+ +.+|+|+|+ .||.|.+++-..+. +.+...+.+++||+.||.|||
T Consensus 219 ~~~~v~~EieILkkL~HP~IV~~~d-~f~~~---ds~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH 293 (475)
T KOG0615|consen 219 KTRDVQNEIEILKKLSHPNIVRIKD-FFEVP---DSSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLH 293 (475)
T ss_pred chhhhHHHHHHHHhcCCCCEEEEee-eeecC---CceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHH
Confidence 3344467788999999999999998 66433 233555555 89999999955443 899999999999999999999
Q ss_pred hcCceeccCCCCceeecCC---CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 100 SQGIVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~---~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
++||+||||||+|||+..+ -.+||+|||+++..|.. .|
T Consensus 294 ~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~----------------------------------sf----- 334 (475)
T KOG0615|consen 294 SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG----------------------------------SF----- 334 (475)
T ss_pred HcCcccccCCcceEEeccCCcceEEEecccchhhccccc----------------------------------ee-----
Confidence 9999999999999999865 67899999998655422 11
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCcc
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCAS 253 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~s 253 (712)
....+|||.|.|||++.+.. +..++
T Consensus 335 ----------------------------------------------------m~TlCGTpsYvAPEVl~~kg~~~~~~kV 362 (475)
T KOG0615|consen 335 ----------------------------------------------------MKTLCGTPSYVAPEVLASKGVEYYPSKV 362 (475)
T ss_pred ----------------------------------------------------hhhhcCCccccChhheecCCeecccchh
Confidence 01278999999999998766 34588
Q ss_pred chHHHHHHHHHhhCCCCCChhh---HHHHHhhcccCC---CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 254 DIYRLGVLLFELFCPFSTGEEK---TRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 254 DIwSlGvll~eLl~pf~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|||||||+||-+|++|.++.+. ......+..+.+ |+.+.....+..+||.+||..||++|||+.|+|+||||+.
T Consensus 363 DiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 363 DIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred eeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 9999999999999955444332 224445555443 3444444555669999999999999999999999999997
Q ss_pred CcC
Q 005147 328 PRD 330 (712)
Q Consensus 328 ~~~ 330 (712)
...
T Consensus 443 ~~~ 445 (475)
T KOG0615|consen 443 APC 445 (475)
T ss_pred ccc
Confidence 654
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-38 Score=318.73 Aligned_cols=208 Identities=22% Similarity=0.244 Sum_probs=171.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
+|..+|...+||+||++|+.+|.+.. .+.|+||| +||+|.++++..+ .+++.....|+++|++||.|||. ++||
T Consensus 126 rEl~il~~~~spyIV~~ygaF~~~~~---~isI~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~~~~II 201 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYGAFYSNGE---EISICMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHEERKII 201 (364)
T ss_pred HHHHHHhhCCCCCeeeEeEEEEeCCc---eEEeehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhccCee
Confidence 67778888999999999996653221 46777777 6999999996654 49999999999999999999995 9999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++..|+|||+|||.+......
T Consensus 202 HRDIKPsNlLvNskGeVKicDFGVS~~lvnS------------------------------------------------- 232 (364)
T KOG0581|consen 202 HRDIKPSNLLVNSKGEVKICDFGVSGILVNS------------------------------------------------- 232 (364)
T ss_pred eccCCHHHeeeccCCCEEeccccccHHhhhh-------------------------------------------------
Confidence 9999999999999999999999988432110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
-....+||..|||||.+.+..|+.++||||||+.++|
T Consensus 233 -------------------------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 233 -------------------------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred -------------------------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 0112689999999999999999999999999999999
Q ss_pred hhC---CCCCC----hhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+.+ ||.+. ......+..+.....|..... ..++..+|+..||++||.+|||+.|+|+|||++....
T Consensus 270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 998 66553 345667777777665555444 4556669999999999999999999999999997755
No 4
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=320.44 Aligned_cols=210 Identities=20% Similarity=0.308 Sum_probs=170.1
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
||..-|..++ ||||++|+. ++.+. ...++++|||...+|.++++.+++.+++..++.|++||+.||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~E-vi~d~--~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKE-VIRDN--DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHH-Hhhcc--CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 6666788899 999999988 44222 2289999999999999999877888999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||+.....|||+|||+|+...+..
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Skp------------------------------------------------- 164 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSKP------------------------------------------------- 164 (538)
T ss_pred ccCChhheEecccceeEecccccccccccCC-------------------------------------------------
Confidence 9999999999988999999999997642220
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
| -+.++-|.||+|||++.... |+.+.|||++||+++|
T Consensus 165 ----------------------------------------P--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 165 ----------------------------------------P--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred ----------------------------------------C--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 0 02267899999999987655 9999999999999999
Q ss_pred hhC--CCCCChhhHHHHHhhcccC---------------------CCc--------hhhhcCchhHHHHHHcCCCCCCCC
Q 005147 265 LFC--PFSTGEEKTRTMSSLRHRV---------------------LPP--------QLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 265 Ll~--pf~~~~~~~~~~~~~~~~~---------------------~~~--------~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+.+ |.+++....+.+..+..-. +|. -++...++..++|.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 988 8777766555554443211 111 122334555699999999999999
Q ss_pred CCHHHHhcCcCCCCCcC
Q 005147 314 PKMGELLQSEFLNEPRD 330 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~ 330 (712)
|||.++|+||||+....
T Consensus 283 pTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 283 PTASQALQHPFFQVGRA 299 (538)
T ss_pred ccHHHHhcCcccccccc
Confidence 99999999999997643
No 5
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-36 Score=321.94 Aligned_cols=211 Identities=20% Similarity=0.243 Sum_probs=172.2
Q ss_pred eeeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 23 ~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+.|++.++++.+.||||+.+|+ ++ +...+.|++++|+.||.|.++|-..++ +++.++.++|+||+.||.|||..+
T Consensus 57 ~~IerEIviMkLi~HpnVl~Lyd-Vw--e~~~~lylvlEyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH~~~ 132 (786)
T KOG0588|consen 57 AGIEREIVIMKLIEHPNVLRLYD-VW--ENKQHLYLVLEYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCHAFN 132 (786)
T ss_pred cchhhhhHHHHHhcCCCeeeeee-ee--ccCceEEEEEEecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHhhhc
Confidence 47899999999999999999999 55 233344555555589999999955554 999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+|+||+..+++||+|||++...-..++ -
T Consensus 133 icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl--------------------------------------------L 168 (786)
T KOG0588|consen 133 ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL--------------------------------------------L 168 (786)
T ss_pred ceeccCCchhhhhhcccCEeeeccceeecccCCcc--------------------------------------------c
Confidence 99999999999999988899999999843211110 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvl 261 (712)
+ ..||.|.|++||++.|.+| +.++||||.||+
T Consensus 169 e-----------------------------------------------TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVI 201 (786)
T KOG0588|consen 169 E-----------------------------------------------TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVI 201 (786)
T ss_pred c-----------------------------------------------ccCCCcccCCchhhcCCCCCCCccccchhHHH
Confidence 1 1579999999999999997 789999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||.||+ ||... +....+..+.++.+... ....+++.+||.+||..||++|+|++||++|||+.....
T Consensus 202 LfALLtG~LPFdDd-Nir~LLlKV~~G~f~MP-s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 202 LFALLTGKLPFDDD-NIRVLLLKVQRGVFEMP-SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS 271 (786)
T ss_pred HHHHHhCCCCCCCc-cHHHHHHHHHcCcccCC-CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence 999999 88744 34456666666665322 334566669999999999999999999999999887644
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-36 Score=293.12 Aligned_cols=197 Identities=19% Similarity=0.240 Sum_probs=159.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhh---cCCCCCCChhHHHHHHHHHHHHHHHhhh--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS-- 100 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l---~~~~~~l~~~~~~~i~~qil~~l~~lHs-- 100 (712)
.+.-+|++++|||||+.++-.+ .....-++|+||+ .+|+|.+.| ++..+.+++..++++|.|++.||..||+
T Consensus 67 ~Ei~lLkQL~HpNIVqYy~~~f--~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~ 144 (375)
T KOG0591|consen 67 KEISLLKQLNHPNIVQYYAHSF--IEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI 144 (375)
T ss_pred HHHHHHHhcCCchHHHHHHHhh--hccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc
Confidence 4566799999999999666222 1222347788888 589999988 4566779999999999999999999999
Q ss_pred cC--ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 101 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 101 ~g--IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
.. |+||||||.||+|+.+|.||+.|||+++.+...
T Consensus 145 ~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~------------------------------------------- 181 (375)
T KOG0591|consen 145 PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK------------------------------------------- 181 (375)
T ss_pred cccceeeccCcchheEEcCCCceeeccchhHhHhcch-------------------------------------------
Confidence 45 999999999999999999999888887543211
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.+ ...+.+|||+||+||.+.+.+|+++||||||
T Consensus 182 --~t---------------------------------------------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 182 --TT---------------------------------------------FAHSLVGTPYYMSPERIHESGYNFKSDIWSL 214 (375)
T ss_pred --hH---------------------------------------------HHHhhcCCCcccCHHHHhcCCCCcchhHHHH
Confidence 00 1123799999999999999999999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCc-hhHHHHHHcCCCCCCCCCCH
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rpt~ 316 (712)
||++|||.. ||.+. +....-..+.++.+|+.+...++ +...+|..|+..||..||+.
T Consensus 215 GCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 999999987 88765 66677778888888776644444 44589999999999999986
No 7
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.7e-36 Score=294.13 Aligned_cols=207 Identities=18% Similarity=0.273 Sum_probs=166.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
|+.-.|+++.|+|+|.++. +| .-...+++|+||++.++.+-|......++...+..|++|++.|+.|||++++|||
T Consensus 50 REIrmLKqLkH~NLVnLiE-VF---rrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHR 125 (396)
T KOG0593|consen 50 REIRMLKQLKHENLVNLIE-VF---RRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHR 125 (396)
T ss_pred HHHHHHHhcccchHHHHHH-HH---HhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecc
Confidence 6777899999999999888 65 3345789999999999988886665669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+.+|.+|+||||+++....+ +|.
T Consensus 126 DIKPENILit~~gvvKLCDFGFAR~L~~p---------------------------------gd~--------------- 157 (396)
T KOG0593|consen 126 DIKPENILITQNGVVKLCDFGFARTLSAP---------------------------------GDN--------------- 157 (396)
T ss_pred cCChhheEEecCCcEEeccchhhHhhcCC---------------------------------cch---------------
Confidence 99999999999999999999999653211 000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
-+.++.|.||+|||.+.| .+|+.++|||++||++.||
T Consensus 158 ------------------------------------------YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl 195 (396)
T KOG0593|consen 158 ------------------------------------------YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAEL 195 (396)
T ss_pred ------------------------------------------hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHH
Confidence 022678999999999988 5699999999999999999
Q ss_pred hC--CCCCChhhHHHHHhhccc--------------------C-CC-----chhhhcCc----hhHHHHHHcCCCCCCCC
Q 005147 266 FC--PFSTGEEKTRTMSSLRHR--------------------V-LP-----PQLLLKFP----KEASFCLWLLHPEPSGR 313 (712)
Q Consensus 266 l~--pf~~~~~~~~~~~~~~~~--------------------~-~~-----~~~~~~~~----~~~~li~~~L~~dP~~R 313 (712)
++ |+.+++........++.. . +| ..+...+| -..+|+..||..||.+|
T Consensus 196 ~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R 275 (396)
T KOG0593|consen 196 LTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDR 275 (396)
T ss_pred hcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccc
Confidence 99 777776655554443321 0 11 11222333 33499999999999999
Q ss_pred CCHHHHhcCcCCCC
Q 005147 314 PKMGELLQSEFLNE 327 (712)
Q Consensus 314 pt~~eiL~hp~~~~ 327 (712)
++.+++|.||||..
T Consensus 276 ~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 276 LSCEQLLHHPYFDG 289 (396)
T ss_pred ccHHHHhcChHHHH
Confidence 99999999999943
No 8
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=305.21 Aligned_cols=239 Identities=18% Similarity=0.226 Sum_probs=185.8
Q ss_pred cccccccccCCC--CC--cceeeeccceeeccCCCCCccccccccccc--ccccCceEEEEeeCCccHHHhhcCCCCCCC
Q 005147 7 RGERFGVRGDDS--ND--FELRKHSDGVELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (712)
Q Consensus 7 ~~~~~~~~~~~~--~~--~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~--~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~ 80 (712)
.|+++++++... .. ..-|..|+..+|.+++|+||+.+++ ++.. ......+|+++++.+.+|.+.|+... .++
T Consensus 46 t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~d-i~~p~~~~~f~DvYiV~elMetDL~~iik~~~-~L~ 123 (359)
T KOG0660|consen 46 TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLD-IFRPPSRDKFNDVYLVFELMETDLHQIIKSQQ-DLT 123 (359)
T ss_pred CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEe-ecccccccccceeEEehhHHhhHHHHHHHcCc-ccc
Confidence 467777777663 12 2237889999999999999999999 4433 22455799999999999999995543 499
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhH
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (712)
...+..+++||+.||.|+|+.||+||||||+|++++.+..+||+|||+++...... .
T Consensus 124 d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~-~---------------------- 180 (359)
T KOG0660|consen 124 DDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF-E---------------------- 180 (359)
T ss_pred HHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccC-c----------------------
Confidence 99999999999999999999999999999999999999999999999996542210 0
Q ss_pred HHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccC
Q 005147 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (712)
Q Consensus 161 ~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (712)
.+ ..+.++.|.||+|
T Consensus 181 --------~~---------------------------------------------------------~mTeYVaTRWYRA 195 (359)
T KOG0660|consen 181 --------DG---------------------------------------------------------FMTEYVATRWYRA 195 (359)
T ss_pred --------cc---------------------------------------------------------chhcceeeeeecC
Confidence 00 0123688999999
Q ss_pred cccccCC-CCCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhccc-------------------------CCC----
Q 005147 241 PEELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR-------------------------VLP---- 288 (712)
Q Consensus 241 PE~~~~~-~~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~-------------------------~~~---- 288 (712)
||++... .|+.+.||||+||+|.||++ |.+++.+....+..+... ..|
T Consensus 196 PElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f 275 (359)
T KOG0660|consen 196 PELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPF 275 (359)
T ss_pred HHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCH
Confidence 9998654 49999999999999999999 766665444433322210 111
Q ss_pred -chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchHHH
Q 005147 289 -PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335 (712)
Q Consensus 289 -~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~e~ 335 (712)
..++...|.+.+|+.+||..||.+|+|++|+|+|||+....++..|+
T Consensus 276 ~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 276 SSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 12344456667999999999999999999999999999988776665
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-35 Score=317.29 Aligned_cols=205 Identities=22% Similarity=0.260 Sum_probs=165.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|..+-+.+.|||||++++ +|++.. .+|++.|+ ..++|.++++ ..+.++|.+++.+++||+.||.|||++||||
T Consensus 67 ~EIeIHr~L~HpnIV~f~~-~FEDs~---nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiH 141 (592)
T KOG0575|consen 67 NEIEIHRSLKHPNIVQFYH-FFEDSN---NVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIH 141 (592)
T ss_pred HHHHHHHhcCCCcEEeeee-EeecCC---ceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCcee
Confidence 5666788899999999998 776543 45667776 4899999886 4456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||..||||+.+.+|||+|||++.....+
T Consensus 142 RDLKLGNlfL~~~~~VKIgDFGLAt~le~~-------------------------------------------------- 171 (592)
T KOG0575|consen 142 RDLKLGNLFLNENMNVKIGDFGLATQLEYD-------------------------------------------------- 171 (592)
T ss_pred cccchhheeecCcCcEEecccceeeeecCc--------------------------------------------------
Confidence 999999999999999999999998543221
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+++ ....+|||.|.|||++....+++.+||||+||+||-|
T Consensus 172 ---------------------------------~Er-------k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtL 211 (592)
T KOG0575|consen 172 ---------------------------------GER-------KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTL 211 (592)
T ss_pred ---------------------------------ccc-------cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhh
Confidence 011 1227899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|. ||... .....+..++...+... .....++.+||.+||.++|.+|||+++||.|+||+.-
T Consensus 212 L~G~PPFetk-~vkety~~Ik~~~Y~~P-~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 212 LVGRPPFETK-TVKETYNKIKLNEYSMP-SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred hhCCCCcccc-hHHHHHHHHHhcCcccc-cccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 99 55543 33455666655443211 1445666799999999999999999999999999544
No 10
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-35 Score=306.47 Aligned_cols=236 Identities=19% Similarity=0.210 Sum_probs=181.3
Q ss_pred ccccccccccccCC--CCCcce--eeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCC
Q 005147 4 RLLRGERFGVRGDD--SNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (712)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~~~--r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l 79 (712)
++.+|+-++++..- ..+.+| -..|++.+|..++||||++|.+.+.. .....+|+|+||+..+|.-++..++-.|
T Consensus 138 ~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~--~~~~siYlVFeYMdhDL~GLl~~p~vkf 215 (560)
T KOG0600|consen 138 DLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS--KLSGSIYLVFEYMDHDLSGLLSSPGVKF 215 (560)
T ss_pred ecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe--cCCceEEEEEecccchhhhhhcCCCccc
Confidence 34455555554432 222344 45589999999999999999986653 3445799999999999999998888789
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchh
Q 005147 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (712)
Q Consensus 80 ~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (712)
++.+++.|++||+.||+|||++||+|||||++||||+.+|.+||+|||+++.+....-
T Consensus 216 t~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~---------------------- 273 (560)
T KOG0600|consen 216 TEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS---------------------- 273 (560)
T ss_pred ChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC----------------------
Confidence 9999999999999999999999999999999999999999999999999965422200
Q ss_pred HHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCcccc
Q 005147 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (712)
Q Consensus 160 ~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (712)
.+ -+..+-|.||+
T Consensus 274 -----------------------------------------------------------------~~--~T~rVvTLWYR 286 (560)
T KOG0600|consen 274 -----------------------------------------------------------------AP--YTSRVVTLWYR 286 (560)
T ss_pred -----------------------------------------------------------------cc--cccceEEeecc
Confidence 00 11256799999
Q ss_pred CcccccCCC-CCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhccc------------CCC------------ch--
Q 005147 240 SPEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR------------VLP------------PQ-- 290 (712)
Q Consensus 240 aPE~~~~~~-~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~------------~~~------------~~-- 290 (712)
|||.+.|.. |+.++|+||+||||.||+. |..++......+..+-+. .+| ..
T Consensus 287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~ 366 (560)
T KOG0600|consen 287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLR 366 (560)
T ss_pred ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHH
Confidence 999999887 9999999999999999999 766665555555443321 011 00
Q ss_pred --hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 291 --LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 291 --~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+....+...+|+..||..||.+|.||.++|+|+||+..+.
T Consensus 367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~ 408 (560)
T KOG0600|consen 367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPL 408 (560)
T ss_pred HHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCC
Confidence 1111123448999999999999999999999999965544
No 11
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.8e-35 Score=281.71 Aligned_cols=234 Identities=15% Similarity=0.196 Sum_probs=187.6
Q ss_pred ccccccccccCCCCC----cceeeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCCh
Q 005147 6 LRGERFGVRGDDSND----FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81 (712)
Q Consensus 6 ~~~~~~~~~~~~~~~----~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~ 81 (712)
.+|++++++...-.+ -..-..||...|+.+.|+||+.+++ +|- ....+-+|+|+...+|...|+.....++.
T Consensus 25 ~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~---~~~~l~lVfEfm~tdLe~vIkd~~i~l~p 100 (318)
T KOG0659|consen 25 ETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELID-VFP---HKSNLSLVFEFMPTDLEVVIKDKNIILSP 100 (318)
T ss_pred CCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhh-hcc---CCCceEEEEEeccccHHHHhcccccccCH
Confidence 467777776554432 1234558888999999999999999 553 33467899999999999999888888999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHH
Q 005147 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (712)
Q Consensus 82 ~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (712)
.++..|+.|++.||+|||++.|+||||||.|+||+++|++|++|||+++.+|.+.-.
T Consensus 101 a~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~----------------------- 157 (318)
T KOG0659|consen 101 ADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI----------------------- 157 (318)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc-----------------------
Confidence 999999999999999999999999999999999999999999999999877665100
Q ss_pred HhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCc
Q 005147 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (712)
Q Consensus 162 ~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (712)
.+..+-|.||+||
T Consensus 158 -------------------------------------------------------------------~~~~V~TRWYRAP 170 (318)
T KOG0659|consen 158 -------------------------------------------------------------------QTHQVVTRWYRAP 170 (318)
T ss_pred -------------------------------------------------------------------cccceeeeeccCh
Confidence 0113569999999
Q ss_pred ccccCCC-CCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhccc----------------------CCCch-----h
Q 005147 242 EELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR----------------------VLPPQ-----L 291 (712)
Q Consensus 242 E~~~~~~-~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~----------------------~~~~~-----~ 291 (712)
|.+.|.. |+..+||||.||++.||+- ||++++...+.+..+-.. .+|.. +
T Consensus 171 ELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf 250 (318)
T KOG0659|consen 171 ELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLF 250 (318)
T ss_pred HHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccccc
Confidence 9999887 9999999999999999998 999887776666544321 11111 2
Q ss_pred hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchH
Q 005147 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 292 ~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
....++..+|+..||.+||.+|+|+.|+|+|+||+..+.+..
T Consensus 251 ~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~ 292 (318)
T KOG0659|consen 251 PAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTP 292 (318)
T ss_pred ccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCC
Confidence 223345569999999999999999999999999997655443
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=302.19 Aligned_cols=216 Identities=19% Similarity=0.197 Sum_probs=163.7
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+++..+|..++|||||+.++. +. ..+...++++||| .||+|.+++++.+..+++..++.+.+||++||.|||++|||
T Consensus 62 ~~Ei~iL~~l~~p~IV~~~G~-~~-~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~v 139 (313)
T KOG0198|consen 62 EREIRILSRLNHPNIVQYYGS-SS-SRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIV 139 (313)
T ss_pred HHHHHHHHhCCCCCEEeeCCc-cc-cccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 466778999999999998882 21 1111467888888 69999999976654799999999999999999999999999
Q ss_pred eccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||||+|||++. ++.+||+|||.+.........
T Consensus 140 H~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~--------------------------------------------- 174 (313)
T KOG0198|consen 140 HCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK--------------------------------------------- 174 (313)
T ss_pred ccCcccceEEEeCCCCeEEeccCcccccccccccc---------------------------------------------
Confidence 9999999999999 699999999988543210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll 262 (712)
+.......||+.|||||++..+. ...++|||||||++
T Consensus 175 ------------------------------------------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtV 212 (313)
T KOG0198|consen 175 ------------------------------------------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTV 212 (313)
T ss_pred ------------------------------------------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEE
Confidence 00011257899999999998643 34599999999999
Q ss_pred HHhhCCCCCChh----hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFCPFSTGEE----KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.||+|+-.++.+ .............|.......++..+|+.+|+..+|++||||.++|+|||.+....
T Consensus 213 vEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 213 VEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred EeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999994333332 23333444444444333334445569999999999999999999999999987654
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=305.19 Aligned_cols=219 Identities=18% Similarity=0.252 Sum_probs=165.9
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|...|..+ +||.|++||. .|.|+. .+|.+++| .+|+|.++|++.+. |++..++.++.||++||+|||++|||
T Consensus 122 ~Ek~~l~~L~~hPgivkLy~-TFQD~~---sLYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GII 196 (604)
T KOG0592|consen 122 REKEALTQLSGHPGIVKLYF-TFQDEE---SLYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGII 196 (604)
T ss_pred HHHHHHHHhhCCCCeEEEEE-Eeeccc---ceEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCce
Confidence 344456667 9999999998 554433 34555555 79999999977654 99999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.+++++|+|||.++.++.....
T Consensus 197 HRDlKPENILLd~dmhikITDFGsAK~l~~~~~~---------------------------------------------- 230 (604)
T KOG0592|consen 197 HRDLKPENILLDKDGHIKITDFGSAKILSPSQKS---------------------------------------------- 230 (604)
T ss_pred eccCChhheeEcCCCcEEEeeccccccCChhhcc----------------------------------------------
Confidence 9999999999999999999999999765433110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
|.+++.. .+. ..+....+||..|.+||++.....++++|||+|||+||.
T Consensus 231 ---~~~~~~~-------------------------~~a---~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQ 279 (604)
T KOG0592|consen 231 ---QENPVDP-------------------------NQA---SSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQ 279 (604)
T ss_pred ---ccCccCc-------------------------ccc---cCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHH
Confidence 0000000 000 000123799999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+. ||....+. ..++.+.+..+. ++..+ +...+||.++|..||.+|+|+++|.+||||.....
T Consensus 280 mlaG~PPFra~Ney-liFqkI~~l~y~--fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 280 MLAGQPPFRAANEY-LIFQKIQALDYE--FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred HhcCCCCCccccHH-HHHHHHHHhccc--CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 999 66654443 455555443321 12223 44559999999999999999999999999998754
No 14
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=309.74 Aligned_cols=203 Identities=25% Similarity=0.380 Sum_probs=162.9
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
|+..+++.+. ||||++++. ++... ..++++|||+ ||+|.+++.+ ..++.+.+++.+|+||+.||+|||++||+
T Consensus 68 rEi~~~~~~~~HpnI~~l~e-v~~t~---~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~ 142 (370)
T KOG0583|consen 68 REISILRRLRSHPNIIRLLE-VFATP---TKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIV 142 (370)
T ss_pred HHHHHHHHhccCCCEeEEEE-EEecC---CeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEe
Confidence 6777888998 999999888 55322 2378888874 7899999976 44599999999999999999999999999
Q ss_pred eccCCCCceeecCC-CcEEEEecccccCCC-CCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 105 VHNVRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 105 HrDLkP~NIll~~~-~~vkl~dfg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
||||||+|||++.+ +.+||+|||++.... .+ ++
T Consensus 143 HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------------------------~~----------- 177 (370)
T KOG0583|consen 143 HRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------------------------GL----------- 177 (370)
T ss_pred eCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------------------------Cc-----------
Confidence 99999999999998 999999999985431 11 00
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CC-CccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VS-CASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~-~~sDIwSlGv 260 (712)
....+|++.|+|||++.+.. |+ .++||||+||
T Consensus 178 ----------------------------------------------l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GV 211 (370)
T KOG0583|consen 178 ----------------------------------------------LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGV 211 (370)
T ss_pred ----------------------------------------------ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHH
Confidence 01158999999999999987 74 8999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
+||.|++ ||..... ......+....+. +.... .++...|+.+||..+|.+|+|+.+|+.||||+.
T Consensus 212 iLy~ml~G~~PF~d~~~-~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 212 ILYVLLCGRLPFDDSNV-PNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHhCCCCCCCccH-HHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 9999999 6654332 3344444444332 22222 677779999999999999999999999999997
No 15
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=274.41 Aligned_cols=207 Identities=19% Similarity=0.213 Sum_probs=163.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+-..+.||||+.+.. .+ .....++++...+.|++|..-|-++ ..+++..+-++++||+++|+|||.+|||||
T Consensus 59 rEarIC~~LqHP~IvrL~~-ti--~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHR 134 (355)
T KOG0033|consen 59 REARICRKLQHPNIVRLHD-SI--QEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHR 134 (355)
T ss_pred HHHHHHHhcCCCcEeehhh-hh--cccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceec
Confidence 5556667799999999888 33 2223344444445799998766222 347999999999999999999999999999
Q ss_pred cCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|+||+|+++.+ ..-||++|||++.+.+.....
T Consensus 135 DvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~--------------------------------------------- 169 (355)
T KOG0033|consen 135 DLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW--------------------------------------------- 169 (355)
T ss_pred cCChhheeeeeccCCCceeecccceEEEeCCcccc---------------------------------------------
Confidence 99999999963 345899999999665422111
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.| .+|||.|||||++...+|+.++|||+.||+||
T Consensus 170 ---------------------------~G-------------------~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLf 203 (355)
T KOG0033|consen 170 ---------------------------HG-------------------FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 203 (355)
T ss_pred ---------------------------cc-------------------ccCCCcccCHHHhhcCCCCCcchhhhhhHHHH
Confidence 01 68999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCC---CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
-||. ||.. +...+.+..+..+.+ ++.+....+...+|+++||..||++|+|+.|+|+|||+.+..
T Consensus 204 iLL~G~~PF~~-~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 204 ILLVGYPPFWD-EDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred HHHhCCCCCCC-ccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 9998 5543 344566676666543 346666677778999999999999999999999999998753
No 16
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=290.83 Aligned_cols=208 Identities=19% Similarity=0.255 Sum_probs=163.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|+-+|..++||.||++.+ .+ .....+|++.++ .||.|.-.|.+.++ +++..++.++..|+.||.|||++||||
T Consensus 74 ~Er~IL~~v~hPFiv~l~y-sF---Qt~~kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiy 148 (357)
T KOG0598|consen 74 AERNILSKIKHPFIVKLIY-SF---QTEEKLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIY 148 (357)
T ss_pred HHHHHHHhCCCCcEeeeEE-ec---ccCCeEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeee
Confidence 3455788899999999888 44 233456666666 79999999965554 999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+..|+++++|||+|+..-... +
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------------------------~--------------- 180 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------------------------D--------------- 180 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccchhcccCC---------------------------------C---------------
Confidence 9999999999999999999999995321110 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|||||++.+.+|+.++|+|||||++|||
T Consensus 181 ------------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeM 218 (357)
T KOG0598|consen 181 ------------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEM 218 (357)
T ss_pred ------------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHH
Confidence 00116899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC----CHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~eiL~hp~~~~~~~ 330 (712)
++ ||... +....+..+.+...+....-..+...+++.++|..||.+|. .+.+|-+||||.....
T Consensus 219 L~G~pPF~~~-~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 219 LTGKPPFYAE-DVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred hhCCCCCcCc-cHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 99 55543 33445555554442222222345566999999999999995 6899999999998754
No 17
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.9e-34 Score=286.45 Aligned_cols=215 Identities=20% Similarity=0.263 Sum_probs=173.5
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
..|+..+|.+..|||||.+-..+. ..+.+.+|+||+|+..+|...|..-.+++...+++.++.|++.||.|||...|+
T Consensus 122 sLREIniLl~~~H~NIV~vkEVVv--G~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wil 199 (419)
T KOG0663|consen 122 SLREINILLKARHPNIVEVKEVVV--GSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWIL 199 (419)
T ss_pred hHHHHHHHHhcCCCCeeeeEEEEe--ccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeE
Confidence 447888899999999999766444 455667999999999999999977667799999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|+|++..|.+|++|||+++.+|++...
T Consensus 200 HRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~---------------------------------------------- 233 (419)
T KOG0663|consen 200 HRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP---------------------------------------------- 233 (419)
T ss_pred ecccchhheeeccCCcEEecccchhhhhcCCccc----------------------------------------------
Confidence 9999999999999999999999999988776100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
-+..+-|.||+|||.+.|.+ |+++.|+||+||++.
T Consensus 234 --------------------------------------------~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~a 269 (419)
T KOG0663|consen 234 --------------------------------------------YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFA 269 (419)
T ss_pred --------------------------------------------CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHH
Confidence 01256799999999999987 999999999999999
Q ss_pred HhhC--CCCCChhhHHHHHhhcc-------cCCC------------------chhhhcC------chhHHHHHHcCCCCC
Q 005147 264 ELFC--PFSTGEEKTRTMSSLRH-------RVLP------------------PQLLLKF------PKEASFCLWLLHPEP 310 (712)
Q Consensus 264 eLl~--pf~~~~~~~~~~~~~~~-------~~~~------------------~~~~~~~------~~~~~li~~~L~~dP 310 (712)
||+. |.+++.........+-. .+.| ..+...+ ....+|+..+|.+||
T Consensus 270 E~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP 349 (419)
T KOG0663|consen 270 ELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDP 349 (419)
T ss_pred HHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCc
Confidence 9999 77766554444333221 0111 0111111 223489999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCc
Q 005147 311 SGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
.+|.||.+.|+|+||.+.+.+
T Consensus 350 ~kR~tA~~~L~h~~F~e~P~p 370 (419)
T KOG0663|consen 350 GKRITAEDGLKHEYFRETPLP 370 (419)
T ss_pred cccccHHHhhcccccccCCCC
Confidence 999999999999999986554
No 18
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-33 Score=287.12 Aligned_cols=276 Identities=15% Similarity=0.142 Sum_probs=188.1
Q ss_pred CCcceeeeccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhh-cCCCCCCChhHHHHHHHHHHHHHH
Q 005147 19 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 19 ~~~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~ 96 (712)
.+...|.+.|..||+.++||-+..||. .++ ..+-+|++|||| ||+|...+ +++++.+++..++.++..++.||+
T Consensus 118 rkKl~Ra~tE~eIL~~lDHPFlPTLYa-~fe---t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALE 193 (459)
T KOG0610|consen 118 RKKLKRAQTEREILSLLDHPFLPTLYA-SFE---TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALE 193 (459)
T ss_pred hhHHHHHHHHHHHHHhcCCCccchhhh-eee---ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHH
Confidence 344458889999999999999999888 442 334578888885 99999987 566778999999999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCC-CcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD-SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
|||-.|||.|||||+||||.++|+|++.||.++...... .+.. ..+..+.............-|.+..
T Consensus 194 YLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~-----------s~~~~~~~~~~~~~~~~~s~f~~r~ 262 (459)
T KOG0610|consen 194 YLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK-----------SSSPRSSGSQPSCRSRQPSCFSPRC 262 (459)
T ss_pred HHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec-----------cCCCCCCCCCcccccccccccccch
Confidence 999999999999999999999999999999998554111 0000 0000000000000000111121110
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccch
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (712)
..... ..+-.+...+....+--.-....+++..+||-.|.|||++.|...+.++|+
T Consensus 263 ~~~~~------------------------~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDW 318 (459)
T KOG0610|consen 263 LSSSK------------------------KRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDW 318 (459)
T ss_pred hcccc------------------------ccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhH
Confidence 00000 000000000000000000111124466899999999999999999999999
Q ss_pred HHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC----HHHHhcCcCCCCC
Q 005147 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEP 328 (712)
Q Consensus 256 wSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~eiL~hp~~~~~ 328 (712)
|+|||+|||||. ||.+..........+.+...-+........+.+||+++|.+||++|.. +.||.+||||+..
T Consensus 319 WtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 319 WTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred HHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence 999999999997 998777765555555554433333344466679999999999999997 9999999999998
Q ss_pred cCchH
Q 005147 329 RDSME 333 (712)
Q Consensus 329 ~~~~~ 333 (712)
...+.
T Consensus 399 nWaLi 403 (459)
T KOG0610|consen 399 NWALI 403 (459)
T ss_pred Chhhe
Confidence 77543
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-34 Score=300.63 Aligned_cols=206 Identities=17% Similarity=0.252 Sum_probs=165.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|..++....|+|||.+++.+... +.++++||| .||+|.+.+.... +++.++..|++.++.||+|||.+||+|
T Consensus 319 nEi~Vm~~~~H~NiVnfl~Sylv~----deLWVVMEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH~~gIiH 392 (550)
T KOG0578|consen 319 NEILVMRDLHHPNIVNFLDSYLVG----DELWVVMEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLHARGIIH 392 (550)
T ss_pred HHHHHHHhccchHHHHHHHHhccc----ceeEEEEeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHHhcceee
Confidence 566778999999999988844322 556666666 7999999884443 899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||-+|||+..+|.|||+|||+|..+....
T Consensus 393 rDIKSDnILL~~~g~vKltDFGFcaqi~~~~------------------------------------------------- 423 (550)
T KOG0578|consen 393 RDIKSDNILLTMDGSVKLTDFGFCAQISEEQ------------------------------------------------- 423 (550)
T ss_pred eccccceeEeccCCcEEEeeeeeeecccccc-------------------------------------------------
Confidence 9999999999999999999999995432210
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.+....+|||+|||||++....|++++||||||++++||
T Consensus 424 -----------------------------------------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEM 462 (550)
T KOG0578|consen 424 -----------------------------------------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEM 462 (550)
T ss_pred -----------------------------------------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHH
Confidence 011226899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc-cCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRH-RVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+- ||..+.. ..++..+.. +....... ...+...+|+.+||+.||.+|+++.|+|+||||+...
T Consensus 463 veGEPPYlnE~P-lrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 463 VEGEPPYLNENP-LRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred hcCCCCccCCCh-HHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 98 7776444 444444443 33332333 3456666999999999999999999999999995443
No 20
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-34 Score=289.35 Aligned_cols=225 Identities=16% Similarity=0.240 Sum_probs=170.8
Q ss_pred ccccccccCCCC--Ccceee--eccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChh
Q 005147 8 GERFGVRGDDSN--DFELRK--HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVY 82 (712)
Q Consensus 8 ~~~~~~~~~~~~--~~~~r~--~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~ 82 (712)
+.+++++..... ....++ ..|..+|+.++|||||++++ +++. .+.+++||||| ||+|.+||++.++ +++.
T Consensus 35 ~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d-~~~~---~~~i~lVMEyC~gGDLs~yi~~~~~-l~e~ 109 (429)
T KOG0595|consen 35 GTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLD-CIED---DDFIYLVMEYCNGGDLSDYIRRRGR-LPEA 109 (429)
T ss_pred CceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEE-EEec---CCeEEEEEEeCCCCCHHHHHHHcCC-CCHH
Confidence 344555444433 333444 57888999999999999998 4432 34677888885 8999999966654 9999
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCC------CcEEEEecccccCCCCCCcccccccccccccCCCCCCC
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~------~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (712)
.+++++.||+.||++||+++||||||||.||||+.. -.+||+|||+++......+
T Consensus 110 t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~------------------- 170 (429)
T KOG0595|consen 110 TARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM------------------- 170 (429)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH-------------------
Confidence 999999999999999999999999999999999864 3478888888854321100
Q ss_pred chhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCc
Q 005147 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (712)
Q Consensus 157 ~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (712)
....+|++
T Consensus 171 ------------------------------------------------------------------------a~tlcGSp 178 (429)
T KOG0595|consen 171 ------------------------------------------------------------------------AETLCGSP 178 (429)
T ss_pred ------------------------------------------------------------------------HHHhhCCc
Confidence 11268999
Q ss_pred cccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhccc--CCCchhhhcCchhHHHHHHcCCCCCC
Q 005147 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 237 ~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (712)
.|||||++....|+.++|+||+|+++|++++ ||.. ....+....+++. ..|.......+...+++...|..+|.
T Consensus 179 lYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a-~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~ 257 (429)
T KOG0595|consen 179 LYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA-ETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPK 257 (429)
T ss_pred cccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc-cCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCcc
Confidence 9999999999999999999999999999999 4543 3333444444433 22222223344555899999999999
Q ss_pred CCCCHHHHhcCcCCCCCc
Q 005147 312 GRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~ 329 (712)
.|.+..+.+.|+++....
T Consensus 258 ~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 258 DRISFEDFFDHPFLAANP 275 (429)
T ss_pred ccCchHHhhhhhhcccCc
Confidence 999999999999998765
No 21
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=292.24 Aligned_cols=217 Identities=18% Similarity=0.214 Sum_probs=166.9
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++.++|+.+.|||||+|+. +.++.+.+.+|+|.||+ .|.+ .|.......+++.+++.|++.++.||+|||.||||
T Consensus 156 ~~EIailKkl~H~nVV~LiE--vLDDP~s~~~YlVley~s~G~v-~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgii 232 (576)
T KOG0585|consen 156 RREIAILKKLHHPNVVKLIE--VLDDPESDKLYLVLEYCSKGEV-KWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGII 232 (576)
T ss_pred HHHHHHHHhcCCcCeeEEEE--eecCcccCceEEEEEeccCCcc-ccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCee
Confidence 37888999999999999988 44677778888888886 4443 34433333389999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|+||+.+|+|||.|||.+..+.....+ ++
T Consensus 233 HRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-------------------------------~~------------- 268 (576)
T KOG0585|consen 233 HRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-------------------------------GS------------- 268 (576)
T ss_pred ccccchhheEEcCCCcEEeeccceeeecccCCcc-------------------------------cc-------------
Confidence 9999999999999999999999998433111000 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 260 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGv 260 (712)
+ . .....+|||.|+|||.+.++. .+++.|||||||
T Consensus 269 -------------------d---------------~-------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGV 307 (576)
T KOG0585|consen 269 -------------------D---------------D-------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGV 307 (576)
T ss_pred -------------------H---------------H-------HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhh
Confidence 0 0 001157999999999998743 578999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.|+. ||..........+.+......+..........+||.+||.+||.+|+++.+|..|||.....+
T Consensus 308 TLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 308 TLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 9999987 888766654333333333333444445667779999999999999999999999999987744
No 22
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.4e-33 Score=295.22 Aligned_cols=256 Identities=14% Similarity=0.148 Sum_probs=170.9
Q ss_pred eeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
|.||+ +|...+.|.||++|+ .|.+ ...+|++||| +||++..+|.+.+ .|++..++.++.+++.|++.+|..|
T Consensus 189 ~aERd--iL~~~ds~~vVKLyY-sFQD---~~~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~g 261 (550)
T KOG0605|consen 189 RAERD--ILAEVDSPWVVKLYY-SFQD---KEYLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLG 261 (550)
T ss_pred HHHHH--HhhhcCCCcEEEEEE-EecC---CCeeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcC
Confidence 44454 788899999999998 5533 3456777777 7999999995554 4999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+|||||||+|+||+..|++|+.|||+|.-.......+ +.......+. . -......||....+..
T Consensus 262 yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~-~~~~~~~~~~---------~--~~~~~~~~~~~~~~~~---- 325 (550)
T KOG0605|consen 262 YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIE-SYRLDEQMQI---------N--LSEAKPSDFPKFNTPR---- 325 (550)
T ss_pred cccccCChhheeecCCCCEeeccccccchhhhhhhhh-hhcchhhhhh---------h--hccCCCcccccccccc----
Confidence 9999999999999999999999999995432221100 0000000000 0 0000001110000000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.. ..........+........+.+|||-|||||++.+..|+..+|+|||||++
T Consensus 326 ------------------------~~---~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Im 378 (550)
T KOG0605|consen 326 ------------------------ST---MSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIM 378 (550)
T ss_pred ------------------------ch---hhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHH
Confidence 00 001111122222222333457999999999999999999999999999999
Q ss_pred HHhhCCCCCC--hhhHHHHHhhcccC---CCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCCcC
Q 005147 263 FELFCPFSTG--EEKTRTMSSLRHRV---LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~pf~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~~~ 330 (712)
||||.+|+++ +........+.... ..|.-....+++.+||.+||. ||.+|. .++||.+||||+...-
T Consensus 379 yEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W 453 (550)
T KOG0605|consen 379 YEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW 453 (550)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence 9999844332 33344555554422 222223334666699999999 999998 5999999999998754
No 23
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.2e-33 Score=280.91 Aligned_cols=220 Identities=19% Similarity=0.255 Sum_probs=169.4
Q ss_pred eeeccceeeccCCCCC-ccccccccccccc--ccCceEEEEeeCCccHHHhhcCCC---CCCChhHHHHHHHHHHHHHHH
Q 005147 24 RKHSDGVELTHGDHLR-NQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYA 97 (712)
Q Consensus 24 r~~~~~~~l~~~~H~n-i~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~---~~l~~~~~~~i~~qil~~l~~ 97 (712)
-..|+..+|..+.|+| |+.+++.++.... ....+++++|+...+|..+++... ..++...++.+++||+.||+|
T Consensus 56 taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 56 TAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred hhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 3457888999999999 9999994443331 233788999999999999996544 347888999999999999999
Q ss_pred hhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 98 lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||++||+||||||.||+|++.|.+|++|||+++.++.+.-
T Consensus 136 ~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~---------------------------------------- 175 (323)
T KOG0594|consen 136 LHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR---------------------------------------- 175 (323)
T ss_pred HHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc----------------------------------------
Confidence 9999999999999999999999999999999965433210
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIY 256 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIw 256 (712)
.-+..++|.||+|||++.|.. |+...|||
T Consensus 176 --------------------------------------------------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiW 205 (323)
T KOG0594|consen 176 --------------------------------------------------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIW 205 (323)
T ss_pred --------------------------------------------------cccccEEEeeccCHHHhcCCCcCCCCcchH
Confidence 011247899999999999984 99999999
Q ss_pred HHHHHHHHhhC--CCCCChhhHHHHHhhccc--------------------CC-----Cchhhh----cCchhHHHHHHc
Q 005147 257 RLGVLLFELFC--PFSTGEEKTRTMSSLRHR--------------------VL-----PPQLLL----KFPKEASFCLWL 305 (712)
Q Consensus 257 SlGvll~eLl~--pf~~~~~~~~~~~~~~~~--------------------~~-----~~~~~~----~~~~~~~li~~~ 305 (712)
|+||+++||++ |.+++.........+-.. .+ +..+.. ..+...+++.+|
T Consensus 206 s~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~ 285 (323)
T KOG0594|consen 206 SLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKL 285 (323)
T ss_pred hHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHH
Confidence 99999999999 665554443333322110 00 001111 113455999999
Q ss_pred CCCCCCCCCCHHHHhcCcCCCCCcCchH
Q 005147 306 LHPEPSGRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 306 L~~dP~~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
|+.+|.+|.|+..+|.||||........
T Consensus 286 L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 286 LQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred hccCcccCcCHHHHhcChhhcccccchh
Confidence 9999999999999999999998866433
No 24
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-34 Score=288.18 Aligned_cols=215 Identities=18% Similarity=0.210 Sum_probs=168.4
Q ss_pred eccceeeccCCCCCcccccccccccccc-cCceEEEEeeCCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~-~~~~~l~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
-+|..+|..++|||||.+...++..... .....+++||...+|.+.++. .++.++..+++-+..||++||.|||+.
T Consensus 65 nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~ 144 (364)
T KOG0658|consen 65 NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH 144 (364)
T ss_pred cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence 4667788899999999999855544433 235667999999999999953 356699999999999999999999999
Q ss_pred CceeccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||.|+|++++ |.+||+|||+++.....+
T Consensus 145 ~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e-------------------------------------------- 180 (364)
T KOG0658|consen 145 GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE-------------------------------------------- 180 (364)
T ss_pred CcccCCCChheEEEcCCCCeEEeccCCcceeeccCC--------------------------------------------
Confidence 99999999999999966 899999999996542210
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlG 259 (712)
..+++.-+..|+|||.+.|.. |+.+.||||.|
T Consensus 181 -----------------------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaG 213 (364)
T KOG0658|consen 181 -----------------------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAG 213 (364)
T ss_pred -----------------------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhh
Confidence 011256699999999999987 99999999999
Q ss_pred HHHHHhhC--CCCCChhhHHHHHhhccc-------------------CCCc---------hhhhcCchhHHHHHHcCCCC
Q 005147 260 VLLFELFC--PFSTGEEKTRTMSSLRHR-------------------VLPP---------QLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 260 vll~eLl~--pf~~~~~~~~~~~~~~~~-------------------~~~~---------~~~~~~~~~~~li~~~L~~d 309 (712)
|+++||+- |.++++.....+..+.+- .+|. ......++..+|+.++|.++
T Consensus 214 CV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~ 293 (364)
T KOG0658|consen 214 CVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYS 293 (364)
T ss_pred HHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccC
Confidence 99999998 766665444444333211 0111 11122356669999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCc
Q 005147 310 PSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|.+|.++.|+|.||||...+++
T Consensus 294 P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 294 PSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhhcCCHHHHhcchhhHHhhCc
Confidence 9999999999999999988764
No 25
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=4.5e-33 Score=281.70 Aligned_cols=207 Identities=20% Similarity=0.309 Sum_probs=169.8
Q ss_pred eeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 23 ~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
.+..|+..|++.+|||||+.+|. +|+ +.+.++|+||| .+|.|.+|+...+ .|++.+++++|+||+.||.|||.+
T Consensus 98 vhIRREIeIMSsLNHPhII~IyE-VFE---NkdKIvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHkn 172 (668)
T KOG0611|consen 98 VHIRREIEIMSSLNHPHIIQIYE-VFE---NKDKIVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKN 172 (668)
T ss_pred HHHHHHHHHHhhcCCCceeehhh-hhc---CCceEEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhc
Confidence 46668888999999999999887 663 44567888888 5999999995554 499999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
+|+|||||.+|||++.+|++||+|||++..+.... |
T Consensus 173 rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k----------------------------------f---------- 208 (668)
T KOG0611|consen 173 RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK----------------------------------F---------- 208 (668)
T ss_pred cceecccchhheeecCCCCeeeeccchhhhhcccc----------------------------------H----------
Confidence 99999999999999999999999999984332211 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGv 260 (712)
...++|+|.|++||+++|.+| ++.+|-|||||
T Consensus 209 -----------------------------------------------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGv 241 (668)
T KOG0611|consen 209 -----------------------------------------------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGV 241 (668)
T ss_pred -----------------------------------------------HHHhcCCcccCCccccCCCCCCCCccchhhHHH
Confidence 112689999999999999997 68999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+||-|+. ||.+.+.. ....++..+.+... ....+...||+|||..+|.+|.|+.+|..|=|++--
T Consensus 242 LLYtLVyGtMPFDG~Dhk-~lvrQIs~GaYrEP--~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwg 309 (668)
T KOG0611|consen 242 LLYTLVYGTMPFDGRDHK-RLVRQISRGAYREP--ETPSDASGLIRWMLMVNPERRATIEDIASHWWVNWG 309 (668)
T ss_pred HHHHHhhcccccCCchHH-HHHHHhhcccccCC--CCCchHHHHHHHHHhcCcccchhHHHHhhhheeecc
Confidence 9999997 88765543 55556665554321 233456689999999999999999999999887743
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.98 E-value=9.2e-33 Score=270.69 Aligned_cols=200 Identities=16% Similarity=0.204 Sum_probs=163.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|+.+.||.++.+++ .+. ....++++|++ .||.|..+|++.++ +++..++.++.||+.||+|||+.+|++|
T Consensus 94 Ek~vL~~v~~PFlv~l~~-t~~---d~~~lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiYR 168 (355)
T KOG0616|consen 94 EKRVLKAVSHPFLVKLYG-TFK---DNSNLYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIYR 168 (355)
T ss_pred HHHHHhhccCceeEEEEE-eec---cCCeEEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeeec
Confidence 445688889999999776 443 33456677776 89999999977665 9999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+.+|.+||+|||+++.....
T Consensus 169 DLKPENiLlD~~G~iKitDFGFAK~v~~r--------------------------------------------------- 197 (355)
T KOG0616|consen 169 DLKPENLLLDQNGHIKITDFGFAKRVSGR--------------------------------------------------- 197 (355)
T ss_pred cCChHHeeeccCCcEEEEeccceEEecCc---------------------------------------------------
Confidence 99999999999999999999998542111
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
....+|||.|+|||++...+|+.++|.|+|||++|||+
T Consensus 198 ------------------------------------------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMl 235 (355)
T KOG0616|consen 198 ------------------------------------------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEML 235 (355)
T ss_pred ------------------------------------------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHH
Confidence 11268999999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccC--CCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+ ||..... ...+..+..+. +|..+ .++..+|+..+|+.|-.+|. ...+|..||||+...
T Consensus 236 aG~pPF~~~~~-~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 236 AGYPPFYDDNP-IQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred cCCCCCcCCCh-HHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 9 6655544 45566655543 33332 46677999999999999994 578999999999753
No 27
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-32 Score=286.18 Aligned_cols=202 Identities=16% Similarity=0.217 Sum_probs=159.8
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
+|+++.+|.+++|+||+.+.+ +|... --|||+|||+ .|-|.+.|+.. +.++......|.++|+.|+.|||.+.|
T Consensus 159 kETdIKHLRkLkH~NII~FkG-VCtqs---PcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hKI 233 (904)
T KOG4721|consen 159 KETDIKHLRKLKHPNIITFKG-VCTQS---PCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHKI 233 (904)
T ss_pred hhhhHHHHHhccCcceeeEee-eecCC---ceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhhH
Confidence 568888999999999999777 88443 3589999996 88999999554 458888889999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||||.-||||+.+..|||+|||.++....-
T Consensus 234 IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~------------------------------------------------ 265 (904)
T KOG4721|consen 234 IHRDLKSPNILISYDDVVKISDFGTSKELSDK------------------------------------------------ 265 (904)
T ss_pred hhhccCCCceEeeccceEEeccccchHhhhhh------------------------------------------------
Confidence 99999999999999999999999987432100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.+.+.+.||..|||||+++..+++.++|||||||+||
T Consensus 266 -------------------------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLW 302 (904)
T KOG4721|consen 266 -------------------------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLW 302 (904)
T ss_pred -------------------------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHH
Confidence 0123478999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhH-HHHHHcCCCCCCCCCCHHHHhcCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSE 323 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rpt~~eiL~hp 323 (712)
|||| ||..-..... +--+....+....+...|+-. -|++.||+..|..||++.+||.|-
T Consensus 303 EmLT~EiPYkdVdssAI-IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 303 EMLTGEIPYKDVDSSAI-IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred HHHhcCCCccccchhee-EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 9999 7764332211 111112222222233344443 688999999999999999999984
No 28
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-32 Score=267.87 Aligned_cols=208 Identities=18% Similarity=0.249 Sum_probs=159.3
Q ss_pred eeccCCCCCccccccccccccccc-CceEEEEee-CCccHHHhh-cCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAI-DPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~-~~~~l~~e~-~g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+...-.|||||.+++ +|+..... ..+++|||+ .||.|...| .+....+++.++..|++||..||.|||+.+|.|||
T Consensus 108 Hw~~s~h~~iV~Iid-VyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRD 186 (400)
T KOG0604|consen 108 HWMASGHPHIVSIID-VYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRD 186 (400)
T ss_pred hhhhcCCCceEEeeh-hhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhcc
Confidence 444578999999999 88765544 467888888 699999999 44455699999999999999999999999999999
Q ss_pred CCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 108 VRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 108 LkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|||+|+|.. ++..+|++|||+++..... +
T Consensus 187 lKpENLLyt~t~~na~lKLtDfGFAK~t~~~---------------------------------~--------------- 218 (400)
T KOG0604|consen 187 LKPENLLYTTTSPNAPLKLTDFGFAKETQEP---------------------------------G--------------- 218 (400)
T ss_pred CChhheeeecCCCCcceEecccccccccCCC---------------------------------c---------------
Confidence 999999997 4456899999988542111 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+-||+|.|||++....|+.++|+|||||++|-
T Consensus 219 -------------------------------------------~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYI 255 (400)
T KOG0604|consen 219 -------------------------------------------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 255 (400)
T ss_pred -------------------------------------------cccCCcccccccCHHHhCchhcCCCCCccchhHHHHH
Confidence 0011455999999999988889999999999999999
Q ss_pred hhCCCCCC---hh--hHHHH-Hhhccc--CCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFCPFSTG---EE--KTRTM-SSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~pf~~~---~~--~~~~~-~~~~~~--~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||+|+++ .. ....| ..++.+ .+|..-+... .+..++|+.+|..+|.+|.|+++++.|||++....
T Consensus 256 lLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 256 LLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA 330 (400)
T ss_pred hhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence 99954443 22 11122 223322 3444434443 44459999999999999999999999999997643
No 29
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=289.02 Aligned_cols=202 Identities=20% Similarity=0.246 Sum_probs=162.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcC-c
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG-I 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~g-I 103 (712)
+|..+|..++|||||++++ +|..... .+++++|| .+|+|.++|.+ ..+.++...++.|+.||+.|++|||+++ |
T Consensus 88 ~E~~il~~l~HpNIV~f~G-~~~~~~~--~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~i 164 (362)
T KOG0192|consen 88 REASLLSRLRHPNIVQFYG-ACTSPPG--SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPI 164 (362)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEcCCCC--ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 4555888899999999777 7754433 68888888 69999999965 4667999999999999999999999999 9
Q ss_pred eeccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 104 VVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 104 vHrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||||+|||++..+ ++||+|||+++......
T Consensus 165 IHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---------------------------------------------- 198 (362)
T KOG0192|consen 165 IHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---------------------------------------------- 198 (362)
T ss_pred eecccChhhEEEcCCCCEEEECCCccceeecccc----------------------------------------------
Confidence 9999999999999997 99999999985421110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc--CCCCCCccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~sDIwSlGv 260 (712)
...+...||+.|||||++. ...|+.++||||||+
T Consensus 199 --------------------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgI 234 (362)
T KOG0192|consen 199 --------------------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGI 234 (362)
T ss_pred --------------------------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHH
Confidence 0001146899999999999 558999999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+||||+| ||........+.........|.......+....++.+||..||..||++.+|+.
T Consensus 235 vlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 235 VLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 9999999 888777633344444455555444445666679999999999999999988866
No 30
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.97 E-value=1.7e-32 Score=288.09 Aligned_cols=207 Identities=20% Similarity=0.256 Sum_probs=166.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++||||+.++. .|+ ...++++|.||+-|+|..+|...+ .++++.++.|..|++.||.|||+.+|+||
T Consensus 50 ~ev~i~r~lkHpniv~m~e-sfE---t~~~~~vVte~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhr 124 (808)
T KOG0597|consen 50 QEVRILRSLKHPNIVEMLE-SFE---TSAHLWVVTEYAVGDLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHR 124 (808)
T ss_pred HHHHHHHhcCCcchhhHHH-hhc---ccceEEEEehhhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 4455788899999999777 553 446899999998779999995544 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|+||.|||+...|.+|++|||+++..+....
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~------------------------------------------------- 155 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNTS------------------------------------------------- 155 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCce-------------------------------------------------
Confidence 9999999999999999999999854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
-.+...|||.|||||.+.+.+|+..+|+|||||++|||+
T Consensus 156 -----------------------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~ 194 (808)
T KOG0597|consen 156 -----------------------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELY 194 (808)
T ss_pred -----------------------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence 011257999999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
. ||....-..-....+.....|+. ...+....|+..+|.+||.+|.|+.+++.|||++....
T Consensus 195 ~G~PPF~a~si~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 195 VGQPPFYARSITQLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred cCCCCchHHHHHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 9 66654443333333333333332 45566779999999999999999999999999887543
No 31
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2e-32 Score=264.66 Aligned_cols=205 Identities=17% Similarity=0.160 Sum_probs=159.1
Q ss_pred ccceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++.-+|.+ .+||+|+.+.+ +|+.+ .-+++|+++ ..|.|.++|... -.+++.+.+.|++||++||.|||.++||
T Consensus 71 ~Ev~ILRqv~GHP~II~l~D-~yes~---sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylHa~~IV 145 (411)
T KOG0599|consen 71 QEISILRQVMGHPYIIDLQD-VYESD---AFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLHARNIV 145 (411)
T ss_pred HHHHHHHHhcCCCcEEEeee-eccCc---chhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 44456766 79999999888 77433 235666666 589999999544 3489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.+.+++|.|||++......+
T Consensus 146 HRDLKpENILlddn~~i~isDFGFa~~l~~Ge------------------------------------------------ 177 (411)
T KOG0599|consen 146 HRDLKPENILLDDNMNIKISDFGFACQLEPGE------------------------------------------------ 177 (411)
T ss_pred hcccChhheeeccccceEEeccceeeccCCch------------------------------------------------
Confidence 99999999999999999999999985432211
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC------CCCCCccchHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRL 258 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~sDIwSl 258 (712)
+....+|||.|.|||.+.- ..|+..+|+|++
T Consensus 178 -------------------------------------------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~ 214 (411)
T KOG0599|consen 178 -------------------------------------------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWAC 214 (411)
T ss_pred -------------------------------------------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHH
Confidence 1123689999999998842 238999999999
Q ss_pred HHHHHHhhCCCCCChh--hHHHHHhhcccCC---CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 259 GVLLFELFCPFSTGEE--KTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 259 Gvll~eLl~pf~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
||++|-||.+.+++-. .......+..+.+ .+++.+......+||.+||+.||.+|.|++|+|+||||..
T Consensus 215 GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 215 GVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 9999999984333322 2222333334333 3555566666779999999999999999999999999954
No 32
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=283.46 Aligned_cols=211 Identities=18% Similarity=0.230 Sum_probs=164.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+.-||+.-+||+||++|+.+| .....+++++.|+||-....+-.-++.|++.++..+++|+++||.|||+++||||
T Consensus 78 VEIeILa~CdHP~ivkLl~ayy---~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHR 154 (1187)
T KOG0579|consen 78 VEIEILAECDHPVIVKLLSAYY---FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHR 154 (1187)
T ss_pred hhhhhhhcCCChHHHHHHHHHh---ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhh
Confidence 4556799999999999999555 3344556666666888887776667779999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||..|||+..+|.|+++|||++...... +
T Consensus 155 DLKAGNiL~TldGdirLADFGVSAKn~~t-----------------------------~--------------------- 184 (1187)
T KOG0579|consen 155 DLKAGNILLTLDGDIRLADFGVSAKNKST-----------------------------R--------------------- 184 (1187)
T ss_pred hccccceEEEecCcEeeecccccccchhH-----------------------------H---------------------
Confidence 99999999999999999999987321000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-----cCCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-----AGAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-----~~~~~~~~sDIwSlGvl 261 (712)
.+.-.++|||+|||||++ ...+|++++||||||++
T Consensus 185 ----------------------------------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGIT 224 (1187)
T KOG0579|consen 185 ----------------------------------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGIT 224 (1187)
T ss_pred ----------------------------------------hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhH
Confidence 011226899999999987 45679999999999999
Q ss_pred HHHhhC--CCCCChhhHHHHHhhcccCCCchh-hhcCch-hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC--PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~--pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|.||.- |-...-+..+++..+.+...|..+ +..|.. ..+|+.+||..||..||++.++|+||||+....
T Consensus 225 LIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 225 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 999998 444444555555555554444322 223443 449999999999999999999999999997654
No 33
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.7e-31 Score=279.27 Aligned_cols=208 Identities=21% Similarity=0.261 Sum_probs=160.5
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+|.. .+|.+|+.||+ | +.....+|++|||+..+|..+|++.....+...++.|..|++.||.++|..||||.|||
T Consensus 412 lL~KLkg~~~IIqL~D--Y--Ev~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLK 487 (677)
T KOG0596|consen 412 LLNKLKGHDKIIQLYD--Y--EVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLK 487 (677)
T ss_pred HHHHhcCCceEEEEee--e--eccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCC
Confidence 4544 58999999998 6 55677899999999999999998777666666999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|.|||+- .|.+||||||++..+..+.
T Consensus 488 PANFLlV-kG~LKLIDFGIA~aI~~DT----------------------------------------------------- 513 (677)
T KOG0596|consen 488 PANFLLV-KGRLKLIDFGIANAIQPDT----------------------------------------------------- 513 (677)
T ss_pred cccEEEE-eeeEEeeeechhcccCccc-----------------------------------------------------
Confidence 9999994 6899999999985443220
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-----------CCCCccchHHH
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----------PVSCASDIYRL 258 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~~~~sDIwSl 258 (712)
++| -.-..+||..|||||.+... .++.+||||||
T Consensus 514 -----TsI------------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSL 558 (677)
T KOG0596|consen 514 -----TSI------------------------------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSL 558 (677)
T ss_pred -----cce------------------------------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhh
Confidence 000 01126899999999998432 26789999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC--chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF--PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||+||+|+. ||....+...-+..+........++... .++.++++.||..||.+|||+.++|+|||++...-+
T Consensus 559 GCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~ 636 (677)
T KOG0596|consen 559 GCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIP 636 (677)
T ss_pred hhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccccc
Confidence 999999998 6665554444444444332111222211 125599999999999999999999999999985543
No 34
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=275.01 Aligned_cols=231 Identities=17% Similarity=0.180 Sum_probs=166.6
Q ss_pred ccccccccCCCCCcc-----eeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCC
Q 005147 8 GERFGVRGDDSNDFE-----LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVD 80 (712)
Q Consensus 8 ~~~~~~~~~~~~~~~-----~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~ 80 (712)
++.++|+..+-.++. +|+| ...++..+||||+..++ .| .....++++|.+ .+|++.++++.. ...++
T Consensus 51 ~e~VAIK~inLEkc~~~ld~l~kE--~~~msl~~HPNIv~~~~-sF---vv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~ 124 (516)
T KOG0582|consen 51 NEVVAIKIINLEKCNNDLDALRKE--VQTMSLIDHPNIVTYHC-SF---VVDSELWVVMPFMAGGSLLDIIKTYYPDGLE 124 (516)
T ss_pred CCEEEEEEeehhhhhhhHHHHHHH--HHHhhhcCCCCcceEEE-EE---EecceeEEeehhhcCCcHHHHHHHHcccccc
Confidence 455555554433321 2444 34688899999999776 33 334567777777 699999998432 22399
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhH
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (712)
+..+..|++++++||+|||.+|.||||||+.||||+.+|.|||.|||.....-..
T Consensus 125 E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~------------------------- 179 (516)
T KOG0582|consen 125 EASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS------------------------- 179 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc-------------------------
Confidence 9999999999999999999999999999999999999999999999976321000
Q ss_pred HHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccC
Q 005147 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (712)
Q Consensus 161 ~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (712)
|.. +. .+-...+||++|||
T Consensus 180 ---------------------------------------------------G~R--------~~--~rf~tfvgtp~wmA 198 (516)
T KOG0582|consen 180 ---------------------------------------------------GDR--------QV--TRFNTFVGTPCWMA 198 (516)
T ss_pred ---------------------------------------------------Cce--------ee--EeeccccCcccccC
Confidence 000 00 00012689999999
Q ss_pred cccccCC--CCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCch-------hhhcC-chhHHHHHHcCC
Q 005147 241 PEELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-------LLLKF-PKEASFCLWLLH 307 (712)
Q Consensus 241 PE~~~~~--~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~li~~~L~ 307 (712)
||++... .|++++||||||++..||.+ ||.........+..+....+.+. -...+ .....++..||+
T Consensus 199 PEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~ 278 (516)
T KOG0582|consen 199 PEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLV 278 (516)
T ss_pred hHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhh
Confidence 9996443 49999999999999999998 77655554455555554432111 11111 223389999999
Q ss_pred CCCCCCCCHHHHhcCcCCCCCcC
Q 005147 308 PEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.||.+|||+.++|+|+||+....
T Consensus 279 kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 279 KDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cCcccCCCHHHHhccHHHhhccc
Confidence 99999999999999999997754
No 35
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97 E-value=2.7e-31 Score=281.08 Aligned_cols=212 Identities=16% Similarity=0.210 Sum_probs=158.4
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
..++..+++.++||||+++++ ++.+ ...+++++|+.+++|.+++......+++.+++.++.||+.||+|||++||+
T Consensus 50 ~~~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 125 (303)
T cd07869 50 AIREASLLKGLKHANIVLLHD-IIHT---KETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYIL 125 (303)
T ss_pred HHHHHHHHhhCCCCCcCeEEE-EEec---CCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 335666889999999999887 4432 346889999988899998866555689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+|++|||++........
T Consensus 126 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 158 (303)
T cd07869 126 HRDLKPQNLLISDTGELKLADFGLARAKSVPSH----------------------------------------------- 158 (303)
T ss_pred cCCCCHHHEEECCCCCEEECCCCcceeccCCCc-----------------------------------------------
Confidence 999999999999999999999998743211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||++.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 195 (303)
T cd07869 159 -------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFV 195 (303)
T ss_pred -------------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHH
Confidence 00013578999999998764 4899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc---c--------------C--------CCchhhh------cCchhHHHHHHcCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH---R--------------V--------LPPQLLL------KFPKEASFCLWLLHPE 309 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~---~--------------~--------~~~~~~~------~~~~~~~li~~~L~~d 309 (712)
+|++ ||............+.. . . .+..+.. ..+...+|+.+||+.|
T Consensus 196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 275 (303)
T cd07869 196 EMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCF 275 (303)
T ss_pred HHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccC
Confidence 9999 56543222221111100 0 0 0000000 1134558999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++|||+.++|+||||+....
T Consensus 276 p~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 276 PKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred chhccCHHHHhcCcccccCCh
Confidence 999999999999999998654
No 36
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=3.3e-31 Score=278.36 Aligned_cols=202 Identities=18% Similarity=0.231 Sum_probs=150.7
Q ss_pred eccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|..++||||+++++ ++... .....+++++|+.+++|.+++.. ....+++.+++.++.||+.||+|||++||+||||
T Consensus 58 l~~~~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dl 136 (290)
T cd07862 58 LETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 136 (290)
T ss_pred hcccCCCCcceEEE-EEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 44568999999887 44321 23346889999988899999943 3345899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.++++|||++.......
T Consensus 137 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 164 (290)
T cd07862 137 KPQNILVTSSGQIKLADFGLARIYSFQM---------------------------------------------------- 164 (290)
T ss_pred CHHHEEEcCCCCEEEccccceEeccCCc----------------------------------------------------
Confidence 9999999999999999999874321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 165 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 205 (290)
T cd07862 165 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 205 (290)
T ss_pred ---------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcC
Confidence 0001457999999999988889999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCC--------------------c----hh-hhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLP--------------------P----QL-LLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~--------------------~----~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
||............+.....+ . .. ....+...+|+.+||+.||++|||+.++|
T Consensus 206 ~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 206 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred CCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 454433322221111110000 0 00 11123345899999999999999999999
Q ss_pred cCcCC
Q 005147 321 QSEFL 325 (712)
Q Consensus 321 ~hp~~ 325 (712)
+||||
T Consensus 286 ~hp~f 290 (290)
T cd07862 286 SHPYF 290 (290)
T ss_pred cCCCC
Confidence 99998
No 37
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=9.9e-31 Score=280.55 Aligned_cols=205 Identities=20% Similarity=0.234 Sum_probs=163.4
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|.++. ||||+.+++ +|++.. .++++||+ .||.|.+.|... . +++.++..+++||+.+|.|||+.||+
T Consensus 84 ~Ev~il~~l~~hpniv~l~~-~~e~~~---~~~lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvv 157 (382)
T KOG0032|consen 84 REVAILQQLSGHPNIVQLKD-AFEDPD---SVYLVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVV 157 (382)
T ss_pred HHHHHHHhccCCCCEEEEEE-EEEcCC---eEEEEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 6667899988 999999888 775443 67888888 599999999444 3 99999999999999999999999999
Q ss_pred eccCCCCceeecCC----CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 105 VHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 105 HrDLkP~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||||||+|||+... +.+|++|||++...+...
T Consensus 158 HrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~-------------------------------------------- 193 (382)
T KOG0032|consen 158 HRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE-------------------------------------------- 193 (382)
T ss_pred eccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc--------------------------------------------
Confidence 99999999999733 479999999985432210
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (712)
.....+||+.|+|||++.+.+|+..+||||+||
T Consensus 194 -----------------------------------------------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gv 226 (382)
T KOG0032|consen 194 -----------------------------------------------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGV 226 (382)
T ss_pred -----------------------------------------------eEeeecCCccccCchhhcCCCCCcccchhHHHH
Confidence 001268999999999999999999999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccC--C-CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRV--L-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++|.|++ ||.......... .+.... + .+.+...+..+.+||..||..||..|+|+.++|+|||++...
T Consensus 227 i~yiLL~G~~PF~~~~~~~~~~-~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 227 ILYILLSGVPPFWGETEFEIFL-AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred HHHHHhhCCCCCcCCChhHHHH-HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 9999999 665554433333 333332 2 233444455566999999999999999999999999999763
No 38
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=4.8e-31 Score=277.15 Aligned_cols=205 Identities=16% Similarity=0.199 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++. ....+++++|+.+++|.+++...+..+++.+++.++.||+.||+|||++||+||
T Consensus 52 ~E~~~l~~l~h~niv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~ 127 (288)
T cd07871 52 REVSLLKNLKHANIVTLHD-IIH---TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHR 127 (288)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEc---CCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4566788999999999887 442 234678899998789999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||+++.......
T Consensus 128 dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~------------------------------------------------- 158 (288)
T cd07871 128 DLKPQNLLINEKGELKLADFGLARAKSVPTK------------------------------------------------- 158 (288)
T ss_pred CCCHHHEEECCCCCEEECcCcceeeccCCCc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l 197 (288)
T cd07871 159 -----------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 197 (288)
T ss_pred -----------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHH
Confidence 0001357899999999876 4589999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhc--cc------------------CCCch--------hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLR--HR------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~------------------~~~~~--------~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||.............. .. .+|.. .....++..+||.+||++||.+||
T Consensus 198 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~ 277 (288)
T cd07871 198 ATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRI 277 (288)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCC
Confidence 99 5544332211111100 00 00000 011223455999999999999999
Q ss_pred CHHHHhcCcCC
Q 005147 315 KMGELLQSEFL 325 (712)
Q Consensus 315 t~~eiL~hp~~ 325 (712)
|++|+|+||||
T Consensus 278 t~~~~l~hp~f 288 (288)
T cd07871 278 SAEAALRHSYF 288 (288)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 39
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=4.3e-31 Score=283.80 Aligned_cols=214 Identities=14% Similarity=0.172 Sum_probs=157.9
Q ss_pred ccceeeccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++... .....+++++|+++++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 48 ~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 48 REIKLLRLLRHPDIVEIKH-IMLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred HHHHHHHhCCCCCEeeecc-eEeccCCCCCceEEEEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666788999999999887 44222 2223578999999899999995543 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------- 159 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTPT---------------------------------------------- 159 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccCc----------------------------------------------
Confidence 9999999999999999999999988432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--CCCCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvll 262 (712)
.......+|+++|+|||++.+ ..++.++|||||||++
T Consensus 160 -----------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl 198 (338)
T cd07859 160 -----------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 198 (338)
T ss_pred -----------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH
Confidence 000011468999999999866 5689999999999999
Q ss_pred HHhhC---CCCCChhhHH--HHH------------------------hhcccCCCch----hhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTR--TMS------------------------SLRHRVLPPQ----LLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~--~~~------------------------~~~~~~~~~~----~~~~~~~~~~li~~~L~~d 309 (712)
|||++ ||........ .+. .+.. ..+.. +....+...+++.+||..+
T Consensus 199 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~ 277 (338)
T cd07859 199 AEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRK-KQPVPFSQKFPNADPLALRLLERLLAFD 277 (338)
T ss_pred HHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcc-cCCCchHHhcCCCChHHHHHHHHHcCcC
Confidence 99999 4543321110 000 0000 01111 1122344569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++|||+.++|+||||+....
T Consensus 278 P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 278 PKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred cccCCCHHHHhcCchhhhcCc
Confidence 999999999999999987654
No 40
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=1.9e-31 Score=288.59 Aligned_cols=225 Identities=20% Similarity=0.265 Sum_probs=167.8
Q ss_pred cccccccccCCCCCcceeee-ccceeeccCC-C-----CCcccccccccccccccCceEEEEeeCCccHHHhhcCC-CCC
Q 005147 7 RGERFGVRGDDSNDFELRKH-SDGVELTHGD-H-----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRS 78 (712)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~~-~~~~~l~~~~-H-----~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~ 78 (712)
.++.++++=.......+|.. .+..+|.+++ | -|+|++++-+ ....|+|||+|+.+.+|.++|+.+ -..
T Consensus 210 T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F----~fr~HlciVfELL~~NLYellK~n~f~G 285 (586)
T KOG0667|consen 210 TGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF----YFRNHLCIVFELLSTNLYELLKNNKFRG 285 (586)
T ss_pred CCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc----ccccceeeeehhhhhhHHHHHHhcCCCC
Confidence 44555555544444455443 5666677766 3 3678887733 345699999999999999999543 345
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCC--CcEEEEecccccCCCCCCcccccccccccccCCCCCCC
Q 005147 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (712)
Q Consensus 79 l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (712)
++...++.++.||+.||.+||+.||||+||||+||||... ..||+||||++...+..
T Consensus 286 lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~--------------------- 344 (586)
T KOG0667|consen 286 LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR--------------------- 344 (586)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc---------------------
Confidence 8999999999999999999999999999999999999843 47999999988432111
Q ss_pred chhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCc
Q 005147 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (712)
Q Consensus 157 ~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (712)
+| .++.+.
T Consensus 345 -----------------------------------vy-------------------------------------tYiQSR 352 (586)
T KOG0667|consen 345 -----------------------------------VY-------------------------------------TYIQSR 352 (586)
T ss_pred -----------------------------------ce-------------------------------------eeeecc
Confidence 11 167799
Q ss_pred cccCcccccCCCCCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhccc--C--------------------------
Q 005147 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR--V-------------------------- 286 (712)
Q Consensus 237 ~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~--~-------------------------- 286 (712)
.|+|||++.|.+|+.+.|||||||+++||++ |+++++.....+..+.+- .
T Consensus 353 fYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~ 432 (586)
T KOG0667|consen 353 FYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLC 432 (586)
T ss_pred ccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeee
Confidence 9999999999999999999999999999999 777765554544333210 0
Q ss_pred --------------------------CCch---hhh-----cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 287 --------------------------LPPQ---LLL-----KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 287 --------------------------~~~~---~~~-----~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
.|+. +.. ......+|+.+||.+||.+|+|+.++|+||||+..
T Consensus 433 ~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 433 VETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred eeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 0100 000 00112489999999999999999999999999965
No 41
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=6.9e-31 Score=276.39 Aligned_cols=203 Identities=15% Similarity=0.130 Sum_probs=157.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++. ....+++++|+ .|++|.+++...+ .+++..++.++.||+.||+|||++||+|
T Consensus 50 ~E~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 124 (291)
T cd05612 50 NEKRVLKEVSHPFIIRLFW-TEH---DQRFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEIVY 124 (291)
T ss_pred HHHHHHHhCCCCcHhhhHh-hhc---cCCeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 3556788999999999887 442 23466777776 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||++......
T Consensus 125 ~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 154 (291)
T cd05612 125 RDLKPENILLDKEGHIKLTDFGFAKKLRDR-------------------------------------------------- 154 (291)
T ss_pred cCCCHHHeEECCCCCEEEEecCcchhccCC--------------------------------------------------
Confidence 999999999999999999999987432100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....|++.|+|||++.+..++.++|||||||++|+|
T Consensus 155 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l 191 (291)
T cd05612 155 -------------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEM 191 (291)
T ss_pred -------------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence 0013579999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... ......+...+||.+||..||.+||+ +.++++||||+...
T Consensus 192 ~~g~~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 261 (291)
T cd05612 192 LVGYPPFFDDNPF-GIYEKILAGKLE-FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD 261 (291)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCcC-CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence 99 66544332 233333322211 11112345569999999999999995 99999999998643
No 42
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.1e-30 Score=285.85 Aligned_cols=211 Identities=17% Similarity=0.150 Sum_probs=156.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|+.++||||+++++ ++. .....++++++.+++|.+++... +.+++.+++.|+.||+.||+|||++||+||
T Consensus 132 ~E~~il~~l~HpnIv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHr 206 (391)
T PHA03212 132 TEAHILRAINHPSIIQLKG-TFT---YNKFTCLILPRYKTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHR 206 (391)
T ss_pred HHHHHHHhCCCCCCCCEeE-EEE---ECCeeEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4667899999999999887 442 23467888888888999988544 348999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++..+.++|+|||++.........
T Consensus 207 DiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~------------------------------------------------ 238 (391)
T PHA03212 207 DIKAENIFINHPGDVCLGDFGAACFPVDINAN------------------------------------------------ 238 (391)
T ss_pred CCChHhEEEcCCCCEEEEeCCccccccccccc------------------------------------------------
Confidence 99999999999999999999987421100000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 239 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 277 (391)
T PHA03212 239 -----------------------------------------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMA 277 (391)
T ss_pred -----------------------------------------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence 001146899999999999888999999999999999999
Q ss_pred C---CCCCChh------hHHHHHhhcc--cC--------------------------CC---c---hhhhcCchhHHHHH
Q 005147 267 C---PFSTGEE------KTRTMSSLRH--RV--------------------------LP---P---QLLLKFPKEASFCL 303 (712)
Q Consensus 267 ~---pf~~~~~------~~~~~~~~~~--~~--------------------------~~---~---~~~~~~~~~~~li~ 303 (712)
+ ||+.... ....+..+.. +. .+ + .......+..+||.
T Consensus 278 tg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~ 357 (391)
T PHA03212 278 TCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLIC 357 (391)
T ss_pred HCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHH
Confidence 8 4432210 0001110000 00 00 0 00011224458999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+||+.||.+|||+.|+|+||||.....+
T Consensus 358 ~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 358 KMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 9999999999999999999999886554
No 43
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=1.6e-30 Score=276.84 Aligned_cols=210 Identities=16% Similarity=0.166 Sum_probs=150.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC--------CCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~--------~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+|+.++||||+++++ ++.. .....+++++++.+++|.+++... ...+++..++.|++||+.||+||
T Consensus 47 ~E~~~l~~l~h~niv~~~~-~~~~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L 124 (317)
T cd07868 47 REIALLRELKHPNVISLQK-VFLS-HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 124 (317)
T ss_pred HHHHHHHhcCCCCCcceee-eEec-CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 4666789999999999887 4422 234568899999989999987321 22488999999999999999999
Q ss_pred hhcCceeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 99 HSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|++||+||||||+|||+ +..+.+|++|||+++........ .
T Consensus 125 H~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~--- 169 (317)
T cd07868 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L--- 169 (317)
T ss_pred HhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--------------------------------c---
Confidence 99999999999999999 45578999999988543221000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCcc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCAS 253 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~s 253 (712)
.......||++|+|||++.+. .++.++
T Consensus 170 ----------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 197 (317)
T cd07868 170 ----------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAI 197 (317)
T ss_pred ----------------------------------------------------cccCCccccccccCCHHHcCCCCcCchh
Confidence 000114679999999999775 489999
Q ss_pred chHHHHHHHHHhhC---CCCCChhh--------HHHHHhhc----------------------------ccCCCc-h---
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLR----------------------------HRVLPP-Q--- 290 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~--------~~~~~~~~----------------------------~~~~~~-~--- 290 (712)
|||||||++|||++ ||....+. ...+..+. ...... .
T Consensus 198 DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (317)
T cd07868 198 DIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIK 277 (317)
T ss_pred hHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccc
Confidence 99999999999999 45322110 00000000 000000 0
Q ss_pred -----hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 291 -----LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 291 -----~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
.....+...+||.+||++||.+|||++|+|+||||
T Consensus 278 ~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 278 YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00011234589999999999999999999999998
No 44
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=9.6e-31 Score=280.26 Aligned_cols=202 Identities=16% Similarity=0.171 Sum_probs=157.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ .+.+ ...+++++|+ .|++|.+++.+.+ .+++..+..++.||+.||+|||++||+|
T Consensus 67 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 141 (329)
T PTZ00263 67 QEKSILMELSHPFIVNMMC-SFQD---ENRVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKDIIY 141 (329)
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEc---CCEEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4556788899999999887 4432 3456777776 6899999996543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||++......
T Consensus 142 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 171 (329)
T PTZ00263 142 RDLKPENLLLDNKGHVKVTDFGFAKKVPDR-------------------------------------------------- 171 (329)
T ss_pred cCCCHHHEEECCCCCEEEeeccCceEcCCC--------------------------------------------------
Confidence 999999999999999999999987432110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....|++.|+|||++.+..++.++|||||||++|||
T Consensus 172 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 208 (329)
T PTZ00263 172 -------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEF 208 (329)
T ss_pred -------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHH
Confidence 0014689999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
++ ||..... ...+..+.....+ ......+...+||.+||+.||.+||+ +++++.||||...
T Consensus 209 ltg~~pf~~~~~-~~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 209 IAGYPPFFDDTP-FRIYEKILAGRLK-FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HcCCCCCCCCCH-HHHHHHHhcCCcC-CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 99 6654333 2333444333221 11112344569999999999999996 7999999999864
No 45
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=5.9e-31 Score=278.26 Aligned_cols=208 Identities=18% Similarity=0.199 Sum_probs=168.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.+.|||||.+.+.++++ ...+||+|+| .||+|.+.|+. .+..+++..+..||.||+.||.|||+.+|+
T Consensus 52 ~E~~lis~~~hP~iv~y~ds~~~~---~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iL 128 (426)
T KOG0589|consen 52 QEMDLLSKLLHPNIVEYKDSFEED---GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVL 128 (426)
T ss_pred HHHHHHHhccCCCeeeeccchhcC---CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 455678999999999988855432 2337888888 59999999943 346689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|||||+.|||++.++.|++.|||+++..+.+. +|
T Consensus 129 HRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------------------------~~------------- 162 (426)
T KOG0589|consen 129 HRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------------------------SL------------- 162 (426)
T ss_pred cccchhhhhhccccCceeecchhhhhhcCCch---------------------------------hh-------------
Confidence 99999999999999999999999887654441 01
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
+...+||+.||+||.+.+.+|+.++|||||||++||
T Consensus 163 --------------------------------------------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yE 198 (426)
T KOG0589|consen 163 --------------------------------------------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYE 198 (426)
T ss_pred --------------------------------------------hheecCCCcccCHHHhCCCCCCccCcchhhcchHHH
Confidence 012689999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ +|...+.. .....+....+.+.......+...++..||..+|..||++.++|.+|.+...
T Consensus 199 m~~lk~aF~a~~m~-~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 199 MCTLKPAFKASNMS-ELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHhcccccCccchH-HHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 999 56555444 4444444455555555555666789999999999999999999999766544
No 46
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=1.2e-30 Score=278.92 Aligned_cols=206 Identities=18% Similarity=0.251 Sum_probs=158.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ .+. ....+++++|+ .|++|.+++.+. ..+++.++..++.||+.||+|||++||+|
T Consensus 44 ~e~~~l~~l~hp~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH 118 (323)
T cd05571 44 TESRVLQNTRHPFLTALKY-SFQ---THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCDVVY 118 (323)
T ss_pred HHHHHHHhCCCCCCCCEEE-EEE---cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 4556788899999999877 442 23467777777 689999998544 35899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++......
T Consensus 119 rDlkp~NIll~~~~~~kl~DfG~a~~~~~~~------------------------------------------------- 149 (323)
T cd05571 119 RDLKLENLMLDKDGHIKITDFGLCKEGISDG------------------------------------------------- 149 (323)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCcccccCC-------------------------------------------------
Confidence 9999999999999999999999874310000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+|++.|+|||++.+..++.++|||||||++|||
T Consensus 150 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 188 (323)
T cd05571 150 -----------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (323)
T ss_pred -----------------------------------------CcccceecCccccChhhhcCCCCCccccCcccchhhhhh
Confidence 000014689999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+..... .......+...+||.+||..||++|| ++.++++||||....
T Consensus 189 ltg~~Pf~~~~~~-~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 189 MCGRLPFYNQDHE-KLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCC-CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 99 66544332 22222222111 11112345566999999999999999 899999999998753
No 47
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=3.6e-30 Score=292.25 Aligned_cols=201 Identities=27% Similarity=0.429 Sum_probs=158.0
Q ss_pred CceEEEEeeCCccHHHhhcCCCCCC-ChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCC
Q 005147 55 DPFVHAIEWGDVSLRQWLDKPKRSV-DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (712)
Q Consensus 55 ~~~~l~~e~~g~sL~~~l~~~~~~l-~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~ 133 (712)
..+||.||||..+|..++...+... ...++.++|+||++||.|+|++|||||||||.||++++.++|||+|||++....
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 3578889998766666663333322 578999999999999999999999999999999999999999999999985421
Q ss_pred CCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 005147 134 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 213 (712)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (712)
.. ..... .+. .+++..
T Consensus 749 ~~-------~~~~d---------------------~~~----~~~~~~-------------------------------- 764 (1351)
T KOG1035|consen 749 EN-------LESID---------------------QDL----SFSTNR-------------------------------- 764 (1351)
T ss_pred hh-------hhhHh---------------------hcc----Cccccc--------------------------------
Confidence 00 00000 000 000000
Q ss_pred ccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCch
Q 005147 214 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQ 290 (712)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~ 290 (712)
....-...+..+||..|+|||++.+.. |+.++|+|||||+||||+.||.+..+.......++.+.+|..
T Consensus 765 --------~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~ 836 (1351)
T KOG1035|consen 765 --------AGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIPEP 836 (1351)
T ss_pred --------cCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCCCC
Confidence 000001234479999999999997665 999999999999999999999999999999999999888877
Q ss_pred ---hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 291 ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 291 ---~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
+.+..+..+.+|.+||+.||++||||.|+|++.||-.
T Consensus 837 ~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 837 ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 7777888889999999999999999999999999986
No 48
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=1.3e-30 Score=280.30 Aligned_cols=202 Identities=15% Similarity=0.127 Sum_probs=158.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++..+..++.||+.||.|||++||+||
T Consensus 81 E~~~l~~l~hp~Iv~~~~-~~~~---~~~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 155 (340)
T PTZ00426 81 ERKILNYINHPFCVNLYG-SFKD---ESYLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLNIVYR 155 (340)
T ss_pred HHHHHHhCCCCCCcceEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 556788899999999888 4432 3457788887 5899999995544 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.++++|||++......
T Consensus 156 DLkp~NILl~~~~~ikL~DFG~a~~~~~~--------------------------------------------------- 184 (340)
T PTZ00426 156 DLKPENLLLDKDGFIKMTDFGFAKVVDTR--------------------------------------------------- 184 (340)
T ss_pred CCCHHHEEECCCCCEEEecCCCCeecCCC---------------------------------------------------
Confidence 99999999999999999999987432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 185 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 222 (340)
T PTZ00426 185 ------------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEIL 222 (340)
T ss_pred ------------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHh
Confidence 00146899999999999888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+ ||...... .....+...... ......+...+++.+||+.+|.+|+ +++++++||||....
T Consensus 223 ~G~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 223 VGCPPFYANEPL-LIYQKILEGIIY-FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred cCCCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 9 66544332 333333333211 1111234556999999999999995 899999999998743
No 49
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.1e-30 Score=280.82 Aligned_cols=206 Identities=17% Similarity=0.178 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+|..++|+||+++++ ++.. ....++++++..++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 106 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 181 (357)
T PHA03209 106 IEAMLLQNVNHPSVIRMKD-TLVS---GAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHR 181 (357)
T ss_pred HHHHHHHhCCCCCCcChhh-eEEe---CCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 3555788999999999888 4432 34567888888889999996666669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++..+.++++|||+++......
T Consensus 182 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------------------------------------------------- 211 (357)
T PHA03209 182 DVKTENIFINDVDQVCIGDLGAAQFPVVAP-------------------------------------------------- 211 (357)
T ss_pred CCCHHHEEECCCCCEEEecCccccccccCc--------------------------------------------------
Confidence 999999999999999999999874211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......||..|+|||++.+..++.++|||||||++|||+
T Consensus 212 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 212 -----------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred -----------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence 000145799999999999989999999999999999999
Q ss_pred C---CCCCChh-h--------HHHHHh-hcc-cCCCchhh-------------------------------hcCchhHHH
Q 005147 267 C---PFSTGEE-K--------TRTMSS-LRH-RVLPPQLL-------------------------------LKFPKEASF 301 (712)
Q Consensus 267 ~---pf~~~~~-~--------~~~~~~-~~~-~~~~~~~~-------------------------------~~~~~~~~l 301 (712)
+ +++.... . ...+.. +.. +..|..+. .......+|
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 330 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFL 330 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHH
Confidence 7 2221100 0 000111 000 01111000 112233479
Q ss_pred HHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 302 CLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|.+||+.||.+|||+.|+|+||||+.
T Consensus 331 i~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 331 VHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHcCCcccCcCHHHHhcCchhcc
Confidence 99999999999999999999999985
No 50
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=4.7e-30 Score=269.22 Aligned_cols=201 Identities=21% Similarity=0.296 Sum_probs=149.3
Q ss_pred eccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|.+++||||+++++ ++.... ....+++++|+.+++|.+++.. ....+++.+++.++.||+.||+|||++||+||||
T Consensus 56 l~~~~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di 134 (288)
T cd07863 56 LEAFDHPNIVRLMD-VCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 134 (288)
T ss_pred hhhcCCCCeeeeee-eeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 45568999999888 443322 2456788899887899999844 3345899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.+|++|||++.......
T Consensus 135 kp~Nili~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 162 (288)
T cd07863 135 KPENILVTSGGQVKLADFGLARIYSCQM---------------------------------------------------- 162 (288)
T ss_pred CHHHEEECCCCCEEECccCccccccCcc----------------------------------------------------
Confidence 9999999999999999999874321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|+..|+|||++.+..++.++|||||||++|+|++
T Consensus 163 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g 203 (288)
T cd07863 163 ---------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 203 (288)
T ss_pred ---------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhC
Confidence 0001357889999999988889999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcc------------------cCCCc-------hhhhc-CchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 268 --PFSTGEEKTRTMSSLRH------------------RVLPP-------QLLLK-FPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~------------------~~~~~-------~~~~~-~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
||..... ...+..+.. ..+.+ ..... .....+++.+||++||.+|||+.++
T Consensus 204 ~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~ 282 (288)
T cd07863 204 KPLFCGNSE-ADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRA 282 (288)
T ss_pred CcCcCCCCH-HHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHH
Confidence 3332222 122111111 00000 01111 2234599999999999999999999
Q ss_pred hcCcCC
Q 005147 320 LQSEFL 325 (712)
Q Consensus 320 L~hp~~ 325 (712)
++||||
T Consensus 283 l~hp~f 288 (288)
T cd07863 283 LQHPFF 288 (288)
T ss_pred hcCCCC
Confidence 999998
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=2.1e-30 Score=275.60 Aligned_cols=205 Identities=16% Similarity=0.201 Sum_probs=157.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ .+.. ...+++++|+ .|++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 42 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 116 (312)
T cd05585 42 AERTVLAQVNCPFIVPLKF-SFQS---PEKLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFNVIY 116 (312)
T ss_pred HHHHHHHhCCCCcEeceee-EEec---CCeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 4556788999999999877 4532 3456777776 6999999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||+++.......
T Consensus 117 rDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 148 (312)
T cd05585 117 RDLKPENILLDYQGHIALCDFGLCKLNMKDDD------------------------------------------------ 148 (312)
T ss_pred CCCCHHHeEECCCCcEEEEECcccccCccCCC------------------------------------------------
Confidence 99999999999999999999998743110000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||++.+..++.++|||||||++|||
T Consensus 149 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el 186 (312)
T cd05585 149 ------------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEM 186 (312)
T ss_pred ------------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHH
Confidence 00114689999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~ 328 (712)
++ ||...... .....+..... .......+...+|+.+||..||.+|| ++.++|+||||...
T Consensus 187 ~tg~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 187 LTGLPPFYDENVN-EMYRKILQEPL-RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HhCCCCcCCCCHH-HHHHHHHcCCC-CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 99 66544332 22222222211 11112334556999999999999997 58999999999875
No 52
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=2.2e-30 Score=287.77 Aligned_cols=213 Identities=15% Similarity=0.191 Sum_probs=154.6
Q ss_pred ccceeeccCCCCCccccccccccccc----ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~----~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
++..+|+.++||||+.+++.++.... ....++++||+.+++|.+++. .....+++..++.|+.||+.||+|||
T Consensus 108 ~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 108 RELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred HHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 46668899999999998773332211 122467899998889988773 34456899999999999999999999
Q ss_pred hcCceeccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
++||+||||||+|||++..+ .+||+|||+++......
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~------------------------------------------ 225 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ------------------------------------------ 225 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC------------------------------------------
Confidence 99999999999999998665 69999999885321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 257 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwS 257 (712)
......|+++|+|||++.+. .|+.++||||
T Consensus 226 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS 256 (440)
T PTZ00036 226 -------------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWS 256 (440)
T ss_pred -------------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHH
Confidence 00114679999999998765 5999999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhcc------------------cCCC----chh----hh-cCchhHHHHHHcCC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLP----PQL----LL-KFPKEASFCLWLLH 307 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~~------------------~~~~----~~~----~~-~~~~~~~li~~~L~ 307 (712)
|||++|||++ ||............+.. ..+| ..+ +. ..++..+||.+||.
T Consensus 257 lGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~ 336 (440)
T PTZ00036 257 LGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLK 336 (440)
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCC
Confidence 9999999999 45433222111111110 0001 001 11 12345699999999
Q ss_pred CCCCCCCCHHHHhcCcCCCCCcC
Q 005147 308 PEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+|||+.|+|+||||.....
T Consensus 337 ~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 337 YEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred CChhHCcCHHHHhCChhHHhhhc
Confidence 99999999999999999987544
No 53
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.97 E-value=4.6e-30 Score=269.21 Aligned_cols=206 Identities=17% Similarity=0.202 Sum_probs=150.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++||||+++++ ++. ....+++++|+..+++.+.+......+++..++.++.||+.||.|||+.||+||
T Consensus 49 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 124 (287)
T cd07848 49 RELKMLRTLKQENIVELKE-AFR---RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHR 124 (287)
T ss_pred HHHHHHHhCCCccccchhh-hEe---cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 4556788899999999887 442 234678888886445555553334458999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++.........
T Consensus 125 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------------ 156 (287)
T cd07848 125 DIKPENLLISHNDVLKLCDFGFARNLSEGSNA------------------------------------------------ 156 (287)
T ss_pred CCCHHHEEEcCCCcEEEeeccCcccccccccc------------------------------------------------
Confidence 99999999999999999999988443111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||++.+..++.++|||||||++|||+
T Consensus 157 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~ 195 (287)
T cd07848 157 -----------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELS 195 (287)
T ss_pred -----------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHH
Confidence 000145789999999999888999999999999999999
Q ss_pred C---CCCCChhhHHHHH--hhccc------------------CCCch---------hh-hcCchhHHHHHHcCCCCCCCC
Q 005147 267 C---PFSTGEEKTRTMS--SLRHR------------------VLPPQ---------LL-LKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~--~~~~~------------------~~~~~---------~~-~~~~~~~~li~~~L~~dP~~R 313 (712)
+ ||........... ..... ..+.. .. ...+...+||.+||+.||++|
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R 275 (287)
T cd07848 196 DGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDR 275 (287)
T ss_pred hCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccC
Confidence 9 5554332211111 10000 00000 00 012335599999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
||++++|+||||
T Consensus 276 ~s~~~~l~hp~f 287 (287)
T cd07848 276 YLTEQCLNHPAF 287 (287)
T ss_pred CCHHHHhcCCCC
Confidence 999999999998
No 54
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.3e-30 Score=246.98 Aligned_cols=204 Identities=17% Similarity=0.212 Sum_probs=164.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc-CCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~-~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
|+..+-+++.||||+++|+ .+.++ ...|++.|| .+|+|...|. .+...+++..+..+++|++.||.|||.++||
T Consensus 71 REiEIqs~L~hpnilrlY~-~fhd~---~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VI 146 (281)
T KOG0580|consen 71 REIEIQSHLRHPNILRLYG-YFHDS---KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVI 146 (281)
T ss_pred heeEeecccCCccHHhhhh-heecc---ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcc
Confidence 5666889999999999998 55443 356777777 6889998884 3445599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|+|++..|.+|++|||.+-....
T Consensus 147 hRdiKpenlLlg~~~~lkiAdfGwsV~~p~-------------------------------------------------- 176 (281)
T KOG0580|consen 147 HRDIKPENLLLGSAGELKIADFGWSVHAPS-------------------------------------------------- 176 (281)
T ss_pred cCCCCHHHhccCCCCCeeccCCCceeecCC--------------------------------------------------
Confidence 999999999999999999999998721100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
. +....+||.-|.+||.+.+..++..+|+|++|++.||
T Consensus 177 -----------------------------------~-------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~ye 214 (281)
T KOG0580|consen 177 -----------------------------------N-------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYE 214 (281)
T ss_pred -----------------------------------C-------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHH
Confidence 0 1122789999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
++. ||.+.. ....++.+++..+.-. ......+.++|.+||..+|.+|.+..|++.|||+...
T Consensus 215 flvg~ppFes~~-~~etYkrI~k~~~~~p-~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 215 FLVGLPPFESQS-HSETYKRIRKVDLKFP-STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHhcCCchhhhh-hHHHHHHHHHccccCC-cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 998 666555 4556666665432211 2334556699999999999999999999999998753
No 55
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=3.3e-30 Score=277.72 Aligned_cols=208 Identities=16% Similarity=0.224 Sum_probs=156.8
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++.... ....+++++++.|++|.++++. ..+++.+++.++.||+.||+|||++||
T Consensus 63 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i 139 (343)
T cd07878 63 RELRLLKHMKHENVIGLLD-VFTPATSIENFNEVYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGI 139 (343)
T ss_pred HHHHHHHhcCCCchhhhhh-hhcccccccccCcEEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4667899999999999887 443222 2246789999999999998853 348999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+|++|||++......
T Consensus 140 vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07878 140 IHRDLKPSNVAVNEDCELRILDFGLARQADDE------------------------------------------------ 171 (343)
T ss_pred ecccCChhhEEECCCCCEEEcCCccceecCCC------------------------------------------------
Confidence 99999999999999999999999987432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
.....|+++|+|||++.+ ..++.++|||||||++
T Consensus 172 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 206 (343)
T cd07878 172 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHH
Confidence 001467999999999877 4589999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc---cC----------------------CCch-----hhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH---RV----------------------LPPQ-----LLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~---~~----------------------~~~~-----~~~~~~~~~~li~~~L~~d 309 (712)
|+|++ ||...... ..+..+.. .. .+.. +....+...+|+.+||..|
T Consensus 207 ~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 285 (343)
T cd07878 207 AELLKGKALFPGNDYI-DQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLD 285 (343)
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCC
Confidence 99998 55433221 11111110 00 0000 0112234459999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCc
Q 005147 310 PSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|.+|||+.++|+||||.....+
T Consensus 286 p~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 286 SDKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred hhhCCCHHHHhcCcchhccCCC
Confidence 9999999999999999876543
No 56
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96 E-value=3.5e-30 Score=270.10 Aligned_cols=208 Identities=13% Similarity=0.147 Sum_probs=156.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++|+|++.+++ .+.. ...+++++++ .+++|.+++.. ....+++..++.++.||+.||+|||++||+
T Consensus 49 ~E~~il~~l~~~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05631 49 NEKRILEKVNSRFVVSLAY-AYET---KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124 (285)
T ss_pred HHHHHHHhcCCCcEEEEEE-EEcc---CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 4566888999999999877 4432 2356677766 68999988743 334589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 125 H~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------ 156 (285)
T cd05631 125 YRDLKPENILLDDRGHIRISDLGLAVQIPEGE------------------------------------------------ 156 (285)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~e 193 (285)
T cd05631 157 -------------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYE 193 (285)
T ss_pred -------------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHH
Confidence 0001468999999999999899999999999999999
Q ss_pred hhC---CCCCChhhH---HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
|++ ||....... .....+... .........+...+|+.+||..||.+||+ ++++++||||.....
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 194 MIQGQSPFRKRKERVKREEVDRRVKED-QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred HHhCCCCCCCCCcchhHHHHHHHhhcc-cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 998 665433211 111111111 11111122345569999999999999997 899999999988643
No 57
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=7.8e-30 Score=286.24 Aligned_cols=197 Identities=15% Similarity=0.229 Sum_probs=142.5
Q ss_pred CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCCCcee
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFV 114 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~NIl 114 (712)
+|.+++.+++ ++. ....++|+++++.|++|.+++.+.+ .+++.+++.|+.||+.||+|||+ .|||||||||+|||
T Consensus 189 ~~~~i~~i~~-~~~--~~~~~~~iv~~~~g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NIL 264 (467)
T PTZ00284 189 DRFPLMKIQR-YFQ--NETGHMCIVMPKYGPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENIL 264 (467)
T ss_pred cCcceeeeEE-EEE--cCCceEEEEEeccCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEE
Confidence 3455666665 442 2345789999999999999995543 49999999999999999999998 59999999999999
Q ss_pred ecCCC----------------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 115 MSSFN----------------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 115 l~~~~----------------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
++..+ .+||+|||.+.....
T Consensus 265 l~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-------------------------------------------- 300 (467)
T PTZ00284 265 METSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-------------------------------------------- 300 (467)
T ss_pred EecCCcccccccccccCCCCceEEECCCCccccCcc--------------------------------------------
Confidence 98665 366666665421100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.....+||+.|+|||++.+..|+.++|||||
T Consensus 301 -------------------------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSl 331 (467)
T PTZ00284 301 -------------------------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSM 331 (467)
T ss_pred -------------------------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHH
Confidence 0011578999999999999999999999999
Q ss_pred HHHHHHhhC---CCCCChhhHH--HHHhhcccCCCchhh---------------------------------------hc
Q 005147 259 GVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL---------------------------------------LK 294 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~--~~~~~~~~~~~~~~~---------------------------------------~~ 294 (712)
||++|||++ ||........ .+.... +.+|..+. ..
T Consensus 332 Gvil~elltG~~pf~~~~~~~~~~~i~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (467)
T PTZ00284 332 GCIIYELYTGKLLYDTHDNLEHLHLMEKTL-GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIR 410 (467)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHc-CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhc
Confidence 999999999 5544332111 111110 00110000 01
Q ss_pred CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+...+||.+||++||.+|||+.|+|+||||.....
T Consensus 411 ~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 411 DDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred hHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 123448999999999999999999999999987543
No 58
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=9.2e-30 Score=276.63 Aligned_cols=208 Identities=20% Similarity=0.229 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+++++ ++.... ....+++++|+.+++|.+++.. .+++..+..++.||+.||+|||++||
T Consensus 72 ~E~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~i 147 (364)
T cd07875 72 RELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 147 (364)
T ss_pred HHHHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 4566788899999999887 443322 2246789999988899998843 37889999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+|++|||+++..+...
T Consensus 148 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~----------------------------------------------- 180 (364)
T cd07875 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 180 (364)
T ss_pred ecCCCCHHHEEECCCCcEEEEeCCCccccCCCC-----------------------------------------------
Confidence 999999999999999999999999884321110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||++.+..++.++|||||||++|
T Consensus 181 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 216 (364)
T cd07875 181 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216 (364)
T ss_pred --------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHH
Confidence 000145789999999999989999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCC---------------------C------------ch--------hhhcCchhH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVL---------------------P------------PQ--------LLLKFPKEA 299 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~---------------------~------------~~--------~~~~~~~~~ 299 (712)
+|++ ||....... .+..+..... | .. .........
T Consensus 217 ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (364)
T cd07875 217 EMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 295 (364)
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHH
Confidence 9998 665443221 1111111000 0 00 000112345
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+||..||.+|||+.++|+||||.....
T Consensus 296 dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 296 DLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 8999999999999999999999999976433
No 59
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3e-31 Score=273.12 Aligned_cols=207 Identities=18% Similarity=0.240 Sum_probs=161.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|..+|++.+++||...|+ .|.. ...+.++||| .||++.+.|+.. ..+++.++.-|+++++.||.|||+++.+|
T Consensus 60 qei~~Ls~~~~~~it~yyg-syl~---g~~LwiiMey~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~kiH 134 (467)
T KOG0201|consen 60 QEISVLSQCDSPNITEYYG-SYLK---GTKLWIIMEYCGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEKKIH 134 (467)
T ss_pred HHHHHHHhcCcchHHhhhh-heee---cccHHHHHHHhcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcceec
Confidence 4677899999999999777 4422 2344555555 699999988544 44699999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||+.||++...|.||++|||++.......
T Consensus 135 rDIKaanil~s~~g~vkl~DfgVa~ql~~~~------------------------------------------------- 165 (467)
T KOG0201|consen 135 RDIKAANILLSESGDVKLADFGVAGQLTNTV------------------------------------------------- 165 (467)
T ss_pred ccccccceeEeccCcEEEEecceeeeeechh-------------------------------------------------
Confidence 9999999999999999999999883221100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.+....+|||.|||||++.+..|+.++||||||++.+||
T Consensus 166 -----------------------------------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEl 204 (467)
T KOG0201|consen 166 -----------------------------------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIEL 204 (467)
T ss_pred -----------------------------------------hccccccccccccchhhhccccccchhhhhhhhHHHHHH
Confidence 011226899999999999988899999999999999999
Q ss_pred hCCCCCC--hhhHHHHHhhcccCCCchhhhcCch-hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FCPFSTG--EEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+++-++. .....++..+ ....||.+...+.. ..+|+..||..+|+.||+|.++|+|+|++...
T Consensus 205 a~GePP~s~~hPmrvlflI-pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 205 AKGEPPHSKLHPMRVLFLI-PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred hcCCCCCcccCcceEEEec-cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 9933332 2222222223 33455555555554 66999999999999999999999999999843
No 60
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.96 E-value=6.3e-30 Score=273.19 Aligned_cols=206 Identities=18% Similarity=0.248 Sum_probs=157.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+.+++ .+. ....+++++|| .|++|.+++.... .+++..++.++.||+.||+|||++||+|
T Consensus 44 ~E~~~l~~l~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 118 (323)
T cd05595 44 TESRVLQNTRHPFLTALKY-AFQ---THDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVY 118 (323)
T ss_pred HHHHHHHhCCCCCCcceee-EEe---cCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 3456788899999999877 442 23467778877 6899999885443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+|++|||++........
T Consensus 119 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------ 150 (323)
T cd05595 119 RDIKLENLMLDKDGHIKITDFGLCKEGISDGA------------------------------------------------ 150 (323)
T ss_pred cCCCHHHEEEcCCCCEEecccHHhccccCCCC------------------------------------------------
Confidence 99999999999999999999998743111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||++.+..++.++|||||||++|||
T Consensus 151 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 188 (323)
T cd05595 151 ------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (323)
T ss_pred ------------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHH
Confidence 00014689999999999988999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
++ ||....... ....+..... .......+...++|.+||..||.+|| ++.++++||||....
T Consensus 189 l~g~~Pf~~~~~~~-~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 189 MCGRLPFYNQDHER-LFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred HhCCCCCCCCCHHH-HHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 98 665443332 2222221111 11112345566999999999999998 899999999998753
No 61
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=1e-29 Score=275.64 Aligned_cols=208 Identities=19% Similarity=0.215 Sum_probs=154.8
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..++||||+.+++ ++.... ....+++++|+.+++|.+++.. .+++..+..++.||+.||+|||++||
T Consensus 69 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~i 144 (359)
T cd07876 69 RELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGI 144 (359)
T ss_pred HHHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4566788999999999888 443322 2235789999988889887732 37899999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++|+|||+++......
T Consensus 145 vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 177 (359)
T cd07876 145 IHRDLKPSNIVVKSDCTLKILDFGLARTACTNF----------------------------------------------- 177 (359)
T ss_pred ccCCCCHHHEEECCCCCEEEecCCCccccccCc-----------------------------------------------
Confidence 999999999999999999999999874321100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 178 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 213 (359)
T cd07876 178 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 213 (359)
T ss_pred --------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHH
Confidence 000146789999999999989999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc------------------------cCCCch-h----------------hhcCchhH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH------------------------RVLPPQ-L----------------LLKFPKEA 299 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~------------------------~~~~~~-~----------------~~~~~~~~ 299 (712)
+|++ ||....... ....+.. ...+.. + ....+...
T Consensus 214 el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (359)
T cd07876 214 ELVKGSVIFQGTDHID-QWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQAR 292 (359)
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHH
Confidence 9998 565432211 1110000 000000 0 00123445
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+||..||++|||+.|+|+||||.....
T Consensus 293 ~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 293 DLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred HHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 9999999999999999999999999985433
No 62
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=2.1e-30 Score=277.70 Aligned_cols=207 Identities=19% Similarity=0.214 Sum_probs=172.4
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc--
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-- 101 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-- 101 (712)
-.++..+|+.+.||||+++|+.+. +..+ ..+.+++|+ ..|+|++|+++.++ ++...++.|++||+.||.|||++
T Consensus 88 ~~~Ev~lLKsL~H~NIirfy~SW~-d~~n-~~in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~~P 164 (632)
T KOG0584|consen 88 LYSEVHLLKSLKHPNIIRFYDSWV-DTDN-KTINFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQDP 164 (632)
T ss_pred HHHHHHHHccCCCCceeeeeehee-cCCC-ceeeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcCCC
Confidence 345667899999999999998444 3333 456666666 69999999966554 99999999999999999999998
Q ss_pred CceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
-|||||||.+||||+ .-|.|||.|+|++......
T Consensus 165 PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--------------------------------------------- 199 (632)
T KOG0584|consen 165 PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--------------------------------------------- 199 (632)
T ss_pred CccccccccceEEEcCCcCceeecchhHHHHhhcc---------------------------------------------
Confidence 699999999999998 5699999888877332111
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (712)
...+.+|||.|||||++. ..|+..+||||||.
T Consensus 200 -----------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGM 231 (632)
T KOG0584|consen 200 -----------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGM 231 (632)
T ss_pred -----------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhH
Confidence 011258999999999986 66999999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
++.||+| ||.--.+.+..++.+..++.|..+.. ..|...+||.+||.. .+.|||+.|+|+||||...
T Consensus 232 CmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 232 CMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 9999999 88877888899999999998877655 356777999999999 8999999999999999986
No 63
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=5.7e-30 Score=274.77 Aligned_cols=202 Identities=17% Similarity=0.240 Sum_probs=156.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+.+++ ++. ....+++++|+ .|++|.+++...+ .+++.+++.++.||+.||.|||++||+||
T Consensus 51 e~~~l~~~~h~~iv~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 125 (333)
T cd05600 51 ERDILTTTKSEWLVKLLY-AFQ---DDEYLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYIHR 125 (333)
T ss_pred HHHHHHhCCCCCCccEEE-EEE---cCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 445688889999999887 443 23457777777 5999999995443 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++......
T Consensus 126 dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~--------------------------------------------------- 154 (333)
T cd05600 126 DLKPENFLIDASGHIKLTDFGLSKGIVTY--------------------------------------------------- 154 (333)
T ss_pred CCCHHHEEECCCCCEEEEeCcCCcccccc---------------------------------------------------
Confidence 99999999999999999999988432100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....|++.|+|||++.+..++.++|||||||++|||+
T Consensus 155 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell 192 (333)
T cd05600 155 ------------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFL 192 (333)
T ss_pred ------------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhh
Confidence 00146899999999999989999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhccc---CCCchh----hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHR---VLPPQL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+ ||..... ...+..+... ...+.. ....+...+|+.+||..+|.+||++.++++||||...
T Consensus 193 ~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 193 CGFPPFSGSTP-NETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred hCCCCCCCCCH-HHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 8 6644332 2222222211 111111 1224556699999999999999999999999999975
No 64
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3e-30 Score=254.62 Aligned_cols=238 Identities=16% Similarity=0.222 Sum_probs=171.2
Q ss_pred cccccccccccCCCCCccee--eeccceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCC
Q 005147 5 LLRGERFGVRGDDSNDFELR--KHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVD 80 (712)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r--~~~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~ 80 (712)
+..|...+|+=.+.+...-| -.|+...+.+ .+|+||+.++. +|+++ ..||+|+|- .||.|...|.+... ++
T Consensus 100 i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLie-fFEdd---~~FYLVfEKm~GGplLshI~~~~~-F~ 174 (463)
T KOG0607|consen 100 IQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIE-FFEDD---TRFYLVFEKMRGGPLLSHIQKRKH-FN 174 (463)
T ss_pred eccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHH-Hhccc---ceEEEEEecccCchHHHHHHHhhh-cc
Confidence 45677777776666644433 3355555544 89999999998 77654 357888776 69999998855544 99
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCc
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (712)
+.++..+++.|+.||+|||.+||.||||||+|||-...++ |||+||.+.+.+...
T Consensus 175 E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~---------------------- 232 (463)
T KOG0607|consen 175 EREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN---------------------- 232 (463)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccC----------------------
Confidence 9999999999999999999999999999999999986665 799999876321100
Q ss_pred hhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCcc
Q 005147 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (712)
Q Consensus 158 ~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (712)
.|..++.++ .....+|+..
T Consensus 233 -----------~~~spastP--------------------------------------------------~L~tPvGSAE 251 (463)
T KOG0607|consen 233 -----------NDCSPASTP--------------------------------------------------ELLTPVGSAE 251 (463)
T ss_pred -----------CCCCCCCCc--------------------------------------------------cccCcccchh
Confidence 111111000 1123689999
Q ss_pred ccCccccc---CC--CCCCccchHHHHHHHHHhhCCCCCCh------------h-----hHHHHHhhccc--CCCchhhh
Q 005147 238 YASPEELA---GA--PVSCASDIYRLGVLLFELFCPFSTGE------------E-----KTRTMSSLRHR--VLPPQLLL 293 (712)
Q Consensus 238 Y~aPE~~~---~~--~~~~~sDIwSlGvll~eLl~pf~~~~------------~-----~~~~~~~~~~~--~~~~~~~~ 293 (712)
|||||++- +. .|+.++|.|||||+||-||++|.++. + ....+..+..+ .+|...+.
T Consensus 252 fMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWa 331 (463)
T KOG0607|consen 252 FMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA 331 (463)
T ss_pred hcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhH
Confidence 99999872 22 38999999999999999999544321 1 11222333333 34555444
Q ss_pred cCc-hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 294 KFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 294 ~~~-~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
..+ ...+++..+|..++.+|.++.++++|||++....
T Consensus 332 hIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 332 HISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred HhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence 444 4459999999999999999999999999997644
No 65
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-30 Score=277.78 Aligned_cols=197 Identities=17% Similarity=0.246 Sum_probs=155.2
Q ss_pred CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCcee
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIl 114 (712)
.||-++.+++ .+ ....++|.+||| .||++..|+.. +.+++..++.|+..|+.||+|||++|||+||||.+|||
T Consensus 427 ~HPFL~~L~~-~f---QT~~~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiL 500 (694)
T KOG0694|consen 427 RHPFLVNLFS-CF---QTKEHLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLL 500 (694)
T ss_pred cCCeEeeccc-cc---ccCCeEEEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheE
Confidence 7999999888 33 455678888888 68886665532 34999999999999999999999999999999999999
Q ss_pred ecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccc
Q 005147 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (712)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~ 194 (712)
|+..|++||+|||+|+.--.. ++
T Consensus 501 LD~eGh~kiADFGlcKe~m~~-----------------------------------------------------g~---- 523 (694)
T KOG0694|consen 501 LDTEGHVKIADFGLCKEGMGQ-----------------------------------------------------GD---- 523 (694)
T ss_pred EcccCcEEecccccccccCCC-----------------------------------------------------CC----
Confidence 999999999999999541000 00
Q ss_pred cccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCCC
Q 005147 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (712)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~ 271 (712)
+....+|||.|||||++.+..|+.++|+|+|||||||||. ||.+
T Consensus 524 ---------------------------------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 524 ---------------------------------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred ---------------------------------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 0112789999999999999999999999999999999998 8876
Q ss_pred ChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
.++....-+.+......|.+ ...+..++++++|..+|++|.. +.+|.+||||+...-
T Consensus 571 ddEee~FdsI~~d~~~yP~~--ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEVRYPRF--LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred CCHHHHHHHHhcCCCCCCCc--ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence 66553333333333322222 2234558999999999999984 689999999998754
No 66
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.96 E-value=1.1e-29 Score=271.85 Aligned_cols=205 Identities=18% Similarity=0.235 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+.+++ .+. ....++++||| .+++|.+++... ..+++.+++.++.||+.||+|||++||+|
T Consensus 44 ~E~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 118 (328)
T cd05593 44 TESRVLKNTRHPFLTSLKY-SFQ---TKDRLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGKIVY 118 (328)
T ss_pred HHHHHHHhCCCCCCcceEE-EEE---cCCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 3456788999999999877 442 23467777777 689999988544 35899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+|++|||+++......
T Consensus 119 rDikp~NIll~~~~~~kL~DfG~~~~~~~~~------------------------------------------------- 149 (328)
T cd05593 119 RDLKLENLMLDKDGHIKITDFGLCKEGITDA------------------------------------------------- 149 (328)
T ss_pred cccCHHHeEECCCCcEEEecCcCCccCCCcc-------------------------------------------------
Confidence 9999999999999999999999874211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 150 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el 188 (328)
T cd05593 150 -----------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (328)
T ss_pred -----------------------------------------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHH
Confidence 000014689999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
++ ||...... .....+..... .......+...+||.+||..||.+|| ++.++++||||...
T Consensus 189 ltG~~Pf~~~~~~-~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 189 MCGRLPFYNQDHE-KLFELILMEDI-KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred hhCCCCCCCCCHH-HHHHHhccCCc-cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99 66543322 22222222111 11112334566999999999999997 89999999999865
No 67
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.2e-29 Score=281.37 Aligned_cols=209 Identities=16% Similarity=0.189 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+|+.++|+||+++++ ++. .....++++++..++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 209 ~E~~iL~~L~HpnIv~l~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr 284 (461)
T PHA03211 209 HEARLLRRLSHPAVLALLD-VRV---VGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHR 284 (461)
T ss_pred HHHHHHHHCCCCCCCcEEE-EEE---ECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEC
Confidence 4556788899999999887 442 234567777777789999986555569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+.++.++|+|||+++........
T Consensus 285 DLKP~NILl~~~~~vkL~DFGla~~~~~~~~~------------------------------------------------ 316 (461)
T PHA03211 285 DIKTENVLVNGPEDICLGDFGAACFARGSWST------------------------------------------------ 316 (461)
T ss_pred cCCHHHEEECCCCCEEEcccCCceeccccccc------------------------------------------------
Confidence 99999999999999999999987432100000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
+ ......||..|+|||++.+..++.++|||||||+||||+
T Consensus 317 ---------------------------------------~-~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~ 356 (461)
T PHA03211 317 ---------------------------------------P-FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA 356 (461)
T ss_pred ---------------------------------------c-cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHH
Confidence 0 000146899999999999989999999999999999998
Q ss_pred C---CCCCChh-------hHHHHHhhccc-----CCCc----------------------------hhhhcCchhHHHHH
Q 005147 267 C---PFSTGEE-------KTRTMSSLRHR-----VLPP----------------------------QLLLKFPKEASFCL 303 (712)
Q Consensus 267 ~---pf~~~~~-------~~~~~~~~~~~-----~~~~----------------------------~~~~~~~~~~~li~ 303 (712)
+ +++.... .......+... .++. .+....+...+||.
T Consensus 357 ~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 436 (461)
T PHA03211 357 VHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVC 436 (461)
T ss_pred HcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHH
Confidence 6 2322110 01111111110 0110 00011234558999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
+||+.||.+|||+.|+|+||||+.
T Consensus 437 ~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 437 RALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHcccChhhCcCHHHHhhCcccCC
Confidence 999999999999999999999975
No 68
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=7.3e-30 Score=275.75 Aligned_cols=233 Identities=16% Similarity=0.224 Sum_probs=161.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+.+++ ++. ....+++++|+ .|++|.+++.+. ..+++..++.++.||+.||+|||++||+||
T Consensus 51 e~~~l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~ 125 (350)
T cd05573 51 ERDILADADSPWIVKLYY-SFQ---DEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHR 125 (350)
T ss_pred HHHHHHhcCCCCccchhh-hee---cCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 445788899999999887 443 23457777777 599999999555 459999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++|+|||++.............. ..+.... ......
T Consensus 126 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~-------------------------~~~~~~~-----~~~~~~ 175 (350)
T cd05573 126 DIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLN-------------------------DSHNLLF-----RDNVLV 175 (350)
T ss_pred CCCHHHeEECCCCCEEeecCCCCccCcccCccccccc-------------------------ccccccc-----cccccc
Confidence 9999999999999999999999865433210000000 0000000 000000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
........+.......||+.|+|||.+.+..++.++|||||||++|||+
T Consensus 176 -------------------------------~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 224 (350)
T cd05573 176 -------------------------------RRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224 (350)
T ss_pred -------------------------------cccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhc
Confidence 0000000001112257899999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcc---cCCCchhhhcCchhHHHHHHcCCCCCCCCCC-HHHHhcCcCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~eiL~hp~~~~~ 328 (712)
+ ||....... ....+.. ....+......+...+||.+||. +|.+||+ +.++|+||||...
T Consensus 225 ~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 225 YGFPPFYSDTLQE-TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred cCCCCCCCCCHHH-HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 9 665544332 2222222 11111122234556699999997 9999999 9999999999874
No 69
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=277.17 Aligned_cols=225 Identities=19% Similarity=0.214 Sum_probs=167.5
Q ss_pred ccccccCCCCCcceee--eccceeeccCCCCCcccccccccccccccCceEEEE-eeCCccHHHhhcCCCCCC--ChhHH
Q 005147 10 RFGVRGDDSNDFELRK--HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAI-EWGDVSLRQWLDKPKRSV--DVYEC 84 (712)
Q Consensus 10 ~~~~~~~~~~~~~~r~--~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~-e~~g~sL~~~l~~~~~~l--~~~~~ 84 (712)
|++++-..-.++.+-. ..+..+=+++.|+|||+.++. + ..+. .+-|.| +++||+|..+|+..-+++ ++..+
T Consensus 602 rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs-~--senG-f~kIFMEqVPGGSLSsLLrskWGPlKDNEstm 677 (1226)
T KOG4279|consen 602 RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGS-V--SENG-FFKIFMEQVPGGSLSSLLRSKWGPLKDNESTM 677 (1226)
T ss_pred EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhc-c--CCCC-eEEEEeecCCCCcHHHHHHhccCCCccchhHH
Confidence 3444444444444411 244555677999999998883 3 2222 444544 458999999997766667 88899
Q ss_pred HHHHHHHHHHHHHhhhcCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHh
Q 005147 85 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (712)
Q Consensus 85 ~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (712)
-.+.+||++||.|||.+.|||||||.+|+|++ .+|.+||.|||.++....-
T Consensus 678 ~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi---------------------------- 729 (1226)
T KOG4279|consen 678 NFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI---------------------------- 729 (1226)
T ss_pred HHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC----------------------------
Confidence 99999999999999999999999999999998 7899999999988543110
Q ss_pred hhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccc
Q 005147 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (712)
Q Consensus 164 ~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (712)
.|++.+ ..||..|||||+
T Consensus 730 -------------------------------------------------------------nP~TET-FTGTLQYMAPEv 747 (1226)
T KOG4279|consen 730 -------------------------------------------------------------NPCTET-FTGTLQYMAPEV 747 (1226)
T ss_pred -------------------------------------------------------------Cccccc-cccchhhhChHh
Confidence 111111 568999999999
Q ss_pred ccCCC--CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH
Q 005147 244 LAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (712)
Q Consensus 244 ~~~~~--~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (712)
+-.++ |+.++|||||||++.||.| ||..-.....+|-.+.- ..-|+.......+...||.+|+.++|..||++.
T Consensus 748 IDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~ 827 (1226)
T KOG4279|consen 748 IDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAK 827 (1226)
T ss_pred hccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHH
Confidence 97665 9999999999999999999 66544444455554432 233333333334455999999999999999999
Q ss_pred HHhcCcCCCCC
Q 005147 318 ELLQSEFLNEP 328 (712)
Q Consensus 318 eiL~hp~~~~~ 328 (712)
++|+.||++..
T Consensus 828 ~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 828 DLLQDPFLQHN 838 (1226)
T ss_pred HhccCcccccC
Confidence 99999999876
No 70
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=1.4e-29 Score=270.64 Aligned_cols=205 Identities=19% Similarity=0.248 Sum_probs=157.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|..++||||+.+++ ++.. ...+++++|+ .|++|.+++.+.+ .+++..+..++.||+.||+|||++||+|
T Consensus 49 ~E~~il~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH 123 (323)
T cd05584 49 AERNILEAVKHPFIVDLIY-AFQT---GGKLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQGIIY 123 (323)
T ss_pred HHHHHHHhCCCCchhceee-EEec---CCeEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3455788999999999887 4432 2356777776 6899999995544 4889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++.......
T Consensus 124 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 155 (323)
T cd05584 124 RDLKPENILLDAQGHVKLTDFGLCKESIHEGT------------------------------------------------ 155 (323)
T ss_pred CCCCHHHeEECCCCCEEEeeCcCCeecccCCC------------------------------------------------
Confidence 99999999999999999999998743210000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||++.+..++.++|||||||++|||
T Consensus 156 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 193 (323)
T cd05584 156 ------------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDM 193 (323)
T ss_pred ------------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHHH
Confidence 00014689999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
++ ||...... ..+..+.....+ ......+...+||.+||..+|++|| ++.++++||||...
T Consensus 194 l~G~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 194 LTGAPPFTAENRK-KTIDKILKGKLN-LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 99 56543332 333333332211 1112235566999999999999999 89999999999864
No 71
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=1.3e-29 Score=274.52 Aligned_cols=209 Identities=19% Similarity=0.225 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+.+++ ++.... ....+++++|+.+++|.+++.. .++...+..++.||+.||+|||++||
T Consensus 65 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~gi 140 (355)
T cd07874 65 RELVLMKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 140 (355)
T ss_pred HHHHHHHHhCCCchhceee-eeeccccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4666788899999999888 443222 2235789999988889888843 37899999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+|++|||+++..+...
T Consensus 141 vHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 173 (355)
T cd07874 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 173 (355)
T ss_pred ccCCCChHHEEECCCCCEEEeeCcccccCCCcc-----------------------------------------------
Confidence 999999999999999999999999884322110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|++.|+|||++.+..++.++|||||||++|
T Consensus 174 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ 209 (355)
T cd07874 174 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209 (355)
T ss_pred --------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 000146799999999999888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc---------------------c-------CCCchhh-----------h-cCchhHH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH---------------------R-------VLPPQLL-----------L-KFPKEAS 300 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~---------------------~-------~~~~~~~-----------~-~~~~~~~ 300 (712)
+|++ ||............+.. . ..+.... . ......+
T Consensus 210 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T cd07874 210 EMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 289 (355)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHH
Confidence 9998 56543321111100000 0 0000000 0 1123458
Q ss_pred HHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 301 FCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 301 li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||.+||..||++|||+.|+|+||||.....
T Consensus 290 li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 290 LLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred HHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 999999999999999999999999986543
No 72
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96 E-value=1.5e-29 Score=269.19 Aligned_cols=210 Identities=17% Similarity=0.193 Sum_probs=149.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC--------CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~--------~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+|+.++||||+.+++ ++. ......+++++++.+++|.+++.. ....+++..++.++.||+.||.||
T Consensus 47 ~E~~~l~~l~h~niv~~~~-~~~-~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l 124 (317)
T cd07867 47 REIALLRELKHPNVIALQK-VFL-SHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124 (317)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEe-ccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 4666888999999999888 332 233456789999988899888732 122478899999999999999999
Q ss_pred hhcCceeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 99 HSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|++||+||||||+||++ +..+.+||+|||+++..+..... .
T Consensus 125 H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~--- 169 (317)
T cd07867 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L--- 169 (317)
T ss_pred HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc--------------------------------c---
Confidence 99999999999999999 45678999999998543221000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCcc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCAS 253 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~s 253 (712)
.......|++.|+|||.+.+. .++.++
T Consensus 170 ----------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 197 (317)
T cd07867 170 ----------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAI 197 (317)
T ss_pred ----------------------------------------------------cccCcceecccccCcHHhcCCCccCcHH
Confidence 000114679999999999774 489999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhH---------HH--H------------Hhhc-------------ccCCC-chh--
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKT---------RT--M------------SSLR-------------HRVLP-PQL-- 291 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~---------~~--~------------~~~~-------------~~~~~-~~~-- 291 (712)
|||||||++|||++ ||....+.. .. + ..+. ..... ...
T Consensus 198 DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (317)
T cd07867 198 DIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIK 277 (317)
T ss_pred HHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhh
Confidence 99999999999999 443221100 00 0 0000 00000 000
Q ss_pred ------hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 292 ------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 292 ------~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
........+|+.+||..||.+|||+.|+|+||||
T Consensus 278 ~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 278 YMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0011234479999999999999999999999998
No 73
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.6e-29 Score=277.27 Aligned_cols=211 Identities=15% Similarity=0.161 Sum_probs=157.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|+.++||||+++++ ++. ....+|+++++.+++|.+++.. ...+++.+++.|+.||+.||.|||++||+||
T Consensus 135 ~E~~il~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHr 209 (392)
T PHA03207 135 REIDILKTISHRAIINLIH-AYR---WKSTVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHR 209 (392)
T ss_pred HHHHHHHhcCCCCccceee-eEe---eCCEEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 4666899999999999887 443 2346888999988899999943 3459999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++..+.++|+|||++.........
T Consensus 210 Dlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~------------------------------------------------ 241 (392)
T PHA03207 210 DVKTENIFLDEPENAVLGDFGAACKLDAHPDT------------------------------------------------ 241 (392)
T ss_pred CCCHHHEEEcCCCCEEEccCccccccCccccc------------------------------------------------
Confidence 99999999999999999999988433211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 242 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 281 (392)
T PHA03207 242 ----------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMS 281 (392)
T ss_pred ----------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHH
Confidence 0001146899999999999888999999999999999999
Q ss_pred C---CCCCChhh--HHHHHhhc--------------------------ccCCC----chhh---hcCchhHHHHHHcCCC
Q 005147 267 C---PFSTGEEK--TRTMSSLR--------------------------HRVLP----PQLL---LKFPKEASFCLWLLHP 308 (712)
Q Consensus 267 ~---pf~~~~~~--~~~~~~~~--------------------------~~~~~----~~~~---~~~~~~~~li~~~L~~ 308 (712)
+ ||...... ...+..+. ....+ +... ....+..+||.+||..
T Consensus 282 ~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~ 361 (392)
T PHA03207 282 VKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTF 361 (392)
T ss_pred HCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhcc
Confidence 8 66543211 01111100 00000 0000 0112344899999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcC
Q 005147 309 EPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||.+|||+.++|.||||.....
T Consensus 362 dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 362 DQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred ChhhCCCHHHHhhCchhhccch
Confidence 9999999999999999986543
No 74
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.96 E-value=1.9e-29 Score=269.10 Aligned_cols=197 Identities=16% Similarity=0.247 Sum_probs=151.5
Q ss_pred CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
.+||||+.+++ ++. ....++++||| .|++|.+++.+.. .+++..+..++.||+.||+|||++||+||||||+||
T Consensus 53 ~~h~~iv~~~~-~~~---~~~~~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NI 127 (320)
T cd05590 53 RNHPFLTQLYC-CFQ---TPDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNV 127 (320)
T ss_pred cCCCchhceee-EEE---cCCEEEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHe
Confidence 47999999887 442 23456777777 6899999985543 489999999999999999999999999999999999
Q ss_pred eecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcc
Q 005147 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (712)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~ 193 (712)
+++.++.++++|||++.......
T Consensus 128 li~~~~~~kL~DfG~~~~~~~~~--------------------------------------------------------- 150 (320)
T cd05590 128 LLDHEGHCKLADFGMCKEGIFNG--------------------------------------------------------- 150 (320)
T ss_pred EECCCCcEEEeeCCCCeecCcCC---------------------------------------------------------
Confidence 99999999999999874311000
Q ss_pred ccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCC
Q 005147 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (712)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~ 270 (712)
.......|++.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 151 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (320)
T cd05590 151 ---------------------------------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFE 197 (320)
T ss_pred ---------------------------------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCC
Confidence 00011468999999999998889999999999999999998 665
Q ss_pred CChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH------HHHhcCcCCCCC
Q 005147 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 328 (712)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~eiL~hp~~~~~ 328 (712)
..... .....+...... ......+...+|+.+||+.||.+||++ +++++||||...
T Consensus 198 ~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 198 AENED-DLFEAILNDEVV-YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 44433 333333332211 111223455699999999999999998 999999999865
No 75
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=1.8e-29 Score=270.57 Aligned_cols=205 Identities=19% Similarity=0.186 Sum_probs=154.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-Cce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIv 104 (712)
++..+|..++||||+++++ ++.. ...+++++|+ .|++|.+++.... .+++..+..++.||+.||.|||++ +|+
T Consensus 52 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~iv 126 (331)
T cd06649 52 RELQVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKHQIM 126 (331)
T ss_pred HHHHHHHHCCCCCCCeEEE-EEEE---CCEEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 4555788999999999888 4432 2356677776 6899999995543 489999999999999999999986 699
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 127 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------ 158 (331)
T cd06649 127 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------------------------------------------------ 158 (331)
T ss_pred cCCCChhhEEEcCCCcEEEccCcccccccccc------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....|++.|+|||.+.+..++.++|||||||++||
T Consensus 159 --------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e 194 (331)
T cd06649 159 --------------------------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 194 (331)
T ss_pred --------------------------------------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHH
Confidence 001457999999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhc----------------------------------------------ccCCCchhh-hc
Q 005147 265 LFC---PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQLL-LK 294 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~-~~ 294 (712)
|++ ||...... .....+. ....+.... ..
T Consensus 195 l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (331)
T cd06649 195 LAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVF 273 (331)
T ss_pred HHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccc
Confidence 998 66433221 1111110 000111111 12
Q ss_pred CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.++..+||.+||..||++|||+.++|+||||+...
T Consensus 274 ~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 274 TPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred cHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 34556999999999999999999999999998654
No 76
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96 E-value=1.8e-29 Score=274.18 Aligned_cols=239 Identities=18% Similarity=0.267 Sum_probs=157.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|+||+++++ .+.+ ...++++||+ .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+||
T Consensus 51 E~~il~~~~~~~iv~~~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~givHr 125 (363)
T cd05628 51 ERDILVEADSLWVVKMFY-SFQD---KLNLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFIHR 125 (363)
T ss_pred HHHHHHhCCCCCcceEEE-EEec---CCeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence 445788899999999887 4432 3457777777 5899999995543 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.+||+|||+++.......... .+ ......+ .++.+......
T Consensus 126 DlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~-~~------~~~~~~~------------~~~~~~~~~~~------- 179 (363)
T cd05628 126 DIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF-YR------NLNHSLP------------SDFTFQNMNSK------- 179 (363)
T ss_pred CCCHHHeEECCCCCEEEeeccCcccccccccccc-cc------ccccccc------------ccccccccccc-------
Confidence 9999999999999999999999865432110000 00 0000000 01100000000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
...+.............+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 180 -----------------------------~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell 230 (363)
T cd05628 180 -----------------------------RKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230 (363)
T ss_pred -----------------------------cccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHH
Confidence 000000000000011257999999999999989999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhccc----CCCchhhhcCchhHHHHHHcCCCCCC---CCCCHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~---~Rpt~~eiL~hp~~~~~~ 329 (712)
+ ||...... .....+... .+|+. ....+...++|.+|+. +|. .||+++||++||||+...
T Consensus 231 ~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~ 300 (363)
T cd05628 231 IGYPPFCSETPQ-ETYKKVMNWKETLIFPPE-VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD 300 (363)
T ss_pred hCCCCCCCCCHH-HHHHHHHcCcCcccCCCc-CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence 9 66544332 333333321 12221 2234556688888764 444 568999999999999763
No 77
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=2e-29 Score=283.33 Aligned_cols=209 Identities=20% Similarity=0.247 Sum_probs=161.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+|+.++||||+++++ .+.. ...++++||| .|++|.++|.. ....+++.++..++.||+.||+|||++|
T Consensus 114 ~E~~~l~~l~Hpniv~~~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ 189 (478)
T PTZ00267 114 SELHCLAACDHFGIVKHFD-DFKS---DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK 189 (478)
T ss_pred HHHHHHHhCCCCCEeEEEE-EEEE---CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4566789999999999888 4422 3467788887 59999988732 2345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+|||++.++.+||+|||+++........ +
T Consensus 190 ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~-------------------------------~------------ 226 (478)
T PTZ00267 190 MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL-------------------------------D------------ 226 (478)
T ss_pred EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-------------------------------c------------
Confidence 999999999999999999999999988543111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 227 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l 261 (478)
T PTZ00267 227 ---------------------------------------------VASSFCGTPYYLAPELWERKRYSKKADMWSLGVIL 261 (478)
T ss_pred ---------------------------------------------cccccCCCccccCHhHhCCCCCCcHHhHHHHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|||++ ||..... ...+..+.....++......+...++|.+||..+|++||++.+++.|+|++..
T Consensus 262 ~el~tg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 262 YELLTLHRPFKGPSQ-REIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHhCCCCCCCCCH-HHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 99999 6654333 23344433333333223334566799999999999999999999999988653
No 78
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96 E-value=2.3e-29 Score=274.26 Aligned_cols=212 Identities=18% Similarity=0.252 Sum_probs=157.3
Q ss_pred eccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+|..++|+||+.+++ ++.... ....+++++|+.+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 47 ~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~i 124 (372)
T cd07853 47 FRELKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGI 124 (372)
T ss_pred HHHHHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccccCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 35666788999999999888 443332 123678999998889999885543 48999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+|||++.++.+||+|||++.........
T Consensus 125 vH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~--------------------------------------------- 159 (372)
T cd07853 125 LHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK--------------------------------------------- 159 (372)
T ss_pred eCCCCChHHEEECCCCCEEeccccceeecccCccc---------------------------------------------
Confidence 99999999999999999999999987432111000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll 262 (712)
......++++|+|||.+.+.. ++.++|||||||++
T Consensus 160 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 195 (372)
T cd07853 160 --------------------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIF 195 (372)
T ss_pred --------------------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHH
Confidence 000135789999999998754 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhh------------------------cccCCCchh-------hhcCchhHHHHHHcCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSL------------------------RHRVLPPQL-------LLKFPKEASFCLWLLHP 308 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~------------------------~~~~~~~~~-------~~~~~~~~~li~~~L~~ 308 (712)
|||++ ||....... ....+ .....++.. ....+...+||.+||..
T Consensus 196 ~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~ 274 (372)
T cd07853 196 AELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVF 274 (372)
T ss_pred HHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCC
Confidence 99998 554432211 11110 011111111 11233455999999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCc
Q 005147 309 EPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
||.+|||+.++|+||||....
T Consensus 275 dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 275 DPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred ChhhCcCHHHHhcCHhhCCCc
Confidence 999999999999999998754
No 79
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.96 E-value=5.3e-29 Score=280.18 Aligned_cols=215 Identities=19% Similarity=0.247 Sum_probs=161.3
Q ss_pred ccceeeccCCCCCccccccccccccc----ccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~----~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++...|..++|+|+++++..+..... ....+++++|| .+++|.++|.. ....+++.++..|+.||+.||+||
T Consensus 80 ~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l 159 (496)
T PTZ00283 80 AEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV 159 (496)
T ss_pred HHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45556788999999987663322111 11135677777 68999999843 234589999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+||||||+|||++.++.+||+|||+++.+...... +
T Consensus 160 H~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-------------------------------~-------- 200 (496)
T PTZ00283 160 HSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD-------------------------------D-------- 200 (496)
T ss_pred HhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc-------------------------------c--------
Confidence 9999999999999999999999999999998543211000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
......||+.|+|||++.+..++.++|||||
T Consensus 201 -------------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSl 231 (496)
T PTZ00283 201 -------------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKKADMFSL 231 (496)
T ss_pred -------------------------------------------------ccccccCCcceeCHHHhCCCCCCcHHHHHHH
Confidence 0011468999999999999899999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++|||++ ||...... ..+........++......+...+++.+||+.+|.+||++.++++|||++....
T Consensus 232 GvilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~~ 305 (496)
T PTZ00283 232 GVLLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFIS 305 (496)
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhhh
Confidence 999999999 66544332 333333333333333334456669999999999999999999999999876543
No 80
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=1.7e-29 Score=270.95 Aligned_cols=207 Identities=18% Similarity=0.216 Sum_probs=152.9
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|.++ +||||+.+++ ++. ....+++++|+ .|++|.+++.... .+++.+++.++.||+.||+|||++||+
T Consensus 53 ~e~~~l~~l~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iv 127 (332)
T cd05614 53 TERNVLEHVRQSPFLVTLHY-AFQ---TEAKLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKLGIV 127 (332)
T ss_pred HHHHHHHhccCCCCcccEEE-EEe---cCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 344567777 5899999776 442 23456777777 5899999995443 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.++|+|||++.........
T Consensus 128 HrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~---------------------------------------------- 161 (332)
T cd05614 128 YRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE---------------------------------------------- 161 (332)
T ss_pred ecCCCHHHeEECCCCCEEEeeCcCCccccccCCC----------------------------------------------
Confidence 9999999999999999999999988432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+.. ++.++|||||||++|
T Consensus 162 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 198 (332)
T cd05614 162 -------------------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIF 198 (332)
T ss_pred -------------------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchhhhh
Confidence 001146899999999998754 889999999999999
Q ss_pred HhhC---CCCCCh---hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 264 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 264 eLl~---pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
||++ ||.... ........+... .++......+...+++.+||..||++|| +++++++||||+..
T Consensus 199 elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 199 ELLTGASPFTLEGERNTQSEVSRRILKC-DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred hhhcCCCCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999 554221 111122222211 1121122334556999999999999999 78899999999874
No 81
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=9.7e-30 Score=250.36 Aligned_cols=217 Identities=19% Similarity=0.231 Sum_probs=163.2
Q ss_pred eeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc----CCCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~----~~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
-+.||..++..+.|||++.+...+.. ....++++++|...+|.+.|+ ...+.++...++.|+.||++||.|||
T Consensus 73 SAcREiaL~REl~h~nvi~Lv~Vfl~---~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH 149 (438)
T KOG0666|consen 73 SACREIALLRELKHPNVISLVKVFLS---HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH 149 (438)
T ss_pred HHHHHHHHHHHhcCCcchhHHHHHhc---cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh
Confidence 34588889999999999998884432 256788999999999999882 23456899999999999999999999
Q ss_pred hcCceeccCCCCceeecCC----CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 100 SQGIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
++=|+||||||+|||+..+ |.|||+|+|+++.+..+-.
T Consensus 150 ~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plk-------------------------------------- 191 (438)
T KOG0666|consen 150 SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLK-------------------------------------- 191 (438)
T ss_pred hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhcccc--------------------------------------
Confidence 9999999999999999866 8999999999976533200
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcc-cccccccCccccCcccccCCC-CCCcc
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM-KQILLMETNWYASPEELAGAP-VSCAS 253 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~-~~~~s 253 (712)
|+ .....+-|.||+|||.+.|.. ||.+.
T Consensus 192 --------------------------------------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~Ai 221 (438)
T KOG0666|consen 192 --------------------------------------------------PLASLDPVVVTIWYRAPELLLGARHYTKAI 221 (438)
T ss_pred --------------------------------------------------ccccCCceEEEEEecChHHhcccccccchh
Confidence 00 001146799999999999987 99999
Q ss_pred chHHHHHHHHHhhC--CCCCCh-hh------------HHHHHhh------------------------cccCCCch-h--
Q 005147 254 DIYRLGVLLFELFC--PFSTGE-EK------------TRTMSSL------------------------RHRVLPPQ-L-- 291 (712)
Q Consensus 254 DIwSlGvll~eLl~--pf~~~~-~~------------~~~~~~~------------------------~~~~~~~~-~-- 291 (712)
|||++||++.||++ |.+... +. .+.+..+ +...+.+. +
T Consensus 222 DvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~ 301 (438)
T KOG0666|consen 222 DVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHK 301 (438)
T ss_pred hhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHH
Confidence 99999999999999 544321 11 1111111 10111110 0
Q ss_pred -----hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 292 -----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 292 -----~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
....+...+|+.+||.+||-+|+|++++|+|+||.....+
T Consensus 302 ~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 302 YYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 0122335589999999999999999999999999987544
No 82
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=2.1e-29 Score=269.18 Aligned_cols=201 Identities=18% Similarity=0.213 Sum_probs=153.8
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+++.++||||+++++ .+. ....+++++|+ .|++|.+++... ..+++..++.++.||+.||+|||++||+|||||
T Consensus 49 ~~~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dik 123 (323)
T cd05575 49 LLKNVKHPFLVGLHY-SFQ---TADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLK 123 (323)
T ss_pred HHhhCCCCCCCCeeE-EEE---eCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence 467799999999877 442 23456777776 689999999554 348999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+|||++.++.+||+|||++.......
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------- 150 (323)
T cd05575 124 PENILLDSQGHVVLTDFGLCKEGIEHS----------------------------------------------------- 150 (323)
T ss_pred HHHeEECCCCcEEEeccCCCcccccCC-----------------------------------------------------
Confidence 999999999999999999874210000
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
.......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 151 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 151 -------------------------------------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred -------------------------------------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCC
Confidence 00011468999999999999899999999999999999999
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~ 328 (712)
||...... ..+..+...... ......+...++|.+||+.+|.+||++ .++++||||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 194 PPFYSRDTA-EMYDNILNKPLR-LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 66544332 333333322211 111234455699999999999999987 699999999864
No 83
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7e-30 Score=269.18 Aligned_cols=207 Identities=16% Similarity=0.152 Sum_probs=166.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+|.++.|||.+..-+ +|. .....++|||||-|+-.++|.-...++.+.++..|+.+.+.||.|||+.+.|||
T Consensus 75 KEVrFL~~l~HPntieYkg-CyL---re~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHR 150 (948)
T KOG0577|consen 75 KEVRFLRQLRHPNTIEYKG-CYL---REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHR 150 (948)
T ss_pred HHHHHHHhccCCCcccccc-eee---ccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 4556799999999999444 663 334568899999888888885555569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||..|||++..|.||++|||++....+
T Consensus 151 DiKAGNILLse~g~VKLaDFGSAsi~~P---------------------------------------------------- 178 (948)
T KOG0577|consen 151 DIKAGNILLSEPGLVKLADFGSASIMAP---------------------------------------------------- 178 (948)
T ss_pred hccccceEecCCCeeeeccccchhhcCc----------------------------------------------------
Confidence 9999999999999999999998843211
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
...++|||+|||||++. .+.|+-++||||||++..
T Consensus 179 ------------------------------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCI 216 (948)
T KOG0577|consen 179 ------------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 216 (948)
T ss_pred ------------------------------------------hhcccCCccccchhHheeccccccCCccceeeccchhh
Confidence 12278999999999985 455999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhH-HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
||.- |++..+.....+. +.....|....+.|.+.. .|+..||+.-|.+|||.+++|.|+|+...+.+.
T Consensus 217 ELAERkPPlFnMNAMSALYH-IAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~t 288 (948)
T KOG0577|consen 217 ELAERKPPLFNMNAMSALYH-IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPT 288 (948)
T ss_pred hhhhcCCCccCchHHHHHHH-HHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCch
Confidence 9998 7776655444433 333334443345565554 999999999999999999999999998876643
No 84
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=3.1e-29 Score=266.14 Aligned_cols=209 Identities=14% Similarity=0.190 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+.+++ ++. ....+++++|+.+++|.+++...+..+++.+++.++.||+.||+|||++||+||
T Consensus 53 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~ 128 (309)
T cd07872 53 REVSLLKDLKHANIVTLHD-IVH---TDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHR 128 (309)
T ss_pred HHHHHHHhCCCCCcceEEE-EEe---eCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 4556788899999999888 443 235688999998889999986655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++........
T Consensus 129 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 159 (309)
T cd07872 129 DLKPQNLLINERGELKLADFGLARAKSVPTK------------------------------------------------- 159 (309)
T ss_pred CCCHHHEEECCCCCEEECccccceecCCCcc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+. .++.++|||||||++|+|
T Consensus 160 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el 198 (309)
T cd07872 160 -----------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEM 198 (309)
T ss_pred -----------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 00013568899999998654 489999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhc--c------------------cCCCch--------hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLR--H------------------RVLPPQ--------LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~------------------~~~~~~--------~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||.............. . ..++.. .....+...+||.+||..||.+||
T Consensus 199 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 278 (309)
T cd07872 199 ASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRI 278 (309)
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCC
Confidence 99 5544322111111100 0 000100 011223445999999999999999
Q ss_pred CHHHHhcCcCCCCCc
Q 005147 315 KMGELLQSEFLNEPR 329 (712)
Q Consensus 315 t~~eiL~hp~~~~~~ 329 (712)
|+.|+|+||||+...
T Consensus 279 t~~e~l~h~~~~~~~ 293 (309)
T cd07872 279 SAEEAMKHAYFRSLG 293 (309)
T ss_pred CHHHHhcChhhhhcc
Confidence 999999999999764
No 85
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=1.7e-29 Score=274.59 Aligned_cols=244 Identities=15% Similarity=0.200 Sum_probs=160.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ .+. ....+++++|+ .|++|.+++...+ .+++.+++.|+.||+.||+|||++||+|
T Consensus 50 ~E~~il~~l~h~~iv~~~~-~~~---~~~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~ivH 124 (364)
T cd05599 50 AERDILAEADNPWVVKLYY-SFQ---DENYLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGYIH 124 (364)
T ss_pred HHHHHHHhCCCCCCcceEE-EEE---cCCeEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 3556788899999999887 443 23467777777 5999999995544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.++++|||++.............. .. ...+.+. .++.....
T Consensus 125 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--~~-----~~~~~~~---------~~~~~~~~--------- 179 (364)
T cd05599 125 RDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRI--LS-----HALPSNF---------LDFISKPM--------- 179 (364)
T ss_pred ccCCHHHeEECCCCCEEEeecccceecccccccccccc--cc-----ccccccc---------cccccccc---------
Confidence 99999999999999999999999865422210000000 00 0000000 00000000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ...................+||+.|+|||++.+..++.++|||||||++|||
T Consensus 180 --------~-------------------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 180 --------S-------------------SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred --------c-------------------ccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 0 0000000000000001125799999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... +......+...+||.+||. +|.+|++ +.++++||||+...
T Consensus 233 ~~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~ 303 (364)
T cd05599 233 LVGYPPFCSDNPQ-ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD 303 (364)
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 99 56544332 222222221111 1111234556699999996 9999997 99999999998753
No 86
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=1.9e-29 Score=270.30 Aligned_cols=204 Identities=17% Similarity=0.243 Sum_probs=151.3
Q ss_pred ceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 29 GVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 29 ~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
..++..+ +||||+++++ ++.. ...+++++|+ .|++|.+++.+. +.+++..++.|+.||+.||+|||++||+||
T Consensus 46 ~~il~~~~~hp~Iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05588 46 KHVFETASNHPFLVGLHS-CFQT---ESRLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYR 120 (329)
T ss_pred HHHHHhccCCCCCCceEE-EEEc---CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 3345454 8999999887 5432 2456777776 689999988544 359999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||+++..-... +
T Consensus 121 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---------------------------------~---------------- 151 (329)
T cd05588 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---------------------------------D---------------- 151 (329)
T ss_pred CCCHHHeEECCCCCEEECcCccccccccCC---------------------------------C----------------
Confidence 999999999999999999999874210000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||++.+..++.++|||||||++|+|+
T Consensus 152 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~ 190 (329)
T cd05588 152 -----------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 190 (329)
T ss_pred -----------------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHH
Confidence 001146899999999999989999999999999999999
Q ss_pred C---CCCCC--------hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC------HHHHhcCcCCCCC
Q 005147 267 C---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~eiL~hp~~~~~ 328 (712)
+ ||... .........+..... .......+...+++.+||..||.+||| +.++++||||...
T Consensus 191 ~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 191 AGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred HCCCCcccccccccccccchHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 8 55311 011112222222211 111122345569999999999999987 7899999999764
No 87
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=2.6e-29 Score=274.77 Aligned_cols=254 Identities=15% Similarity=0.224 Sum_probs=159.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|..++||||+++++ .+.+ ...+++++|+ .|++|.+++.+.. .+++..++.++.||+.||+|||++||+|
T Consensus 50 ~E~~il~~l~h~~iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~givH 124 (381)
T cd05626 50 AERDILAEADNEWVVKLYY-SFQD---KDNLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMGFIH 124 (381)
T ss_pred HHHHHHHhcCCCCeeeeEE-EEec---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 4555788999999999888 4432 3457777777 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.++++|||++..+............. . .......+..+. .+. +.
T Consensus 125 rDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~--------~~~------------~~ 182 (381)
T cd05626 125 RDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGS-H-IRQDSMEPSDLW--------DDV------------SN 182 (381)
T ss_pred cCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccc-c-ccccccCccccc--------ccc------------cc
Confidence 9999999999999999999999986432211000000000 0 000000000000 000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
|. .+. ...+.. .... ...........+||+.|+|||.+.+..++.++|||||||++|||
T Consensus 183 ~~-----~~~-----------~~~~~~--~~~~---~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 183 CR-----CGD-----------RLKTLE--QRAT---KQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred cc-----ccc-----------ccchhh--cccc---ccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 00 000 000000 0000 00000001225799999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhc--ccCCCchhhhcCchhHHHHHHcC--CCCCCCCCCHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L--~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
++ ||............+. .....+......++..+||.+|+ ..+|..||++.++++||||...
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 242 LVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99 6655443322222221 11111222233466679998855 4556669999999999999864
No 88
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-29 Score=267.09 Aligned_cols=200 Identities=19% Similarity=0.235 Sum_probs=162.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++.-++..+.|+|||++++ +|..+ .+++|++|| ..|+|.+||+. .+..++..+.+.++.||++|++||.++++|
T Consensus 250 ~Ea~iMk~L~H~~lV~l~g-V~~~~---~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~I 325 (468)
T KOG0197|consen 250 REAQIMKKLRHEKLVKLYG-VCTKQ---EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYI 325 (468)
T ss_pred HHHHHHHhCcccCeEEEEE-EEecC---CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5566899999999999888 66432 378888888 59999999975 566789999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||...|||++.++.+||+|||+++..+.++..
T Consensus 326 HRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~---------------------------------------------- 359 (468)
T KOG0197|consen 326 HRDLAARNILVDEDLVVKISDFGLARLIGDDEYT---------------------------------------------- 359 (468)
T ss_pred chhhhhhheeeccCceEEEcccccccccCCCcee----------------------------------------------
Confidence 9999999999999999999999999754433211
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......+ ..-|.|||.+..+.++.+||||||||+|||
T Consensus 360 ----------------------------------~~~~~kf---------PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E 396 (468)
T KOG0197|consen 360 ----------------------------------ASEGGKF---------PIKWTAPEALNYGKFSSKSDVWSFGVLLWE 396 (468)
T ss_pred ----------------------------------ecCCCCC---------CceecCHHHHhhCCcccccceeehhhhHHH
Confidence 0001112 234789999999999999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
|+| ||.. ....++...+..+..-+......+...+++..||+.+|++|||++.+.
T Consensus 397 ~fT~G~~py~~-msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 397 LFTYGRVPYPG-MSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HhccCCCCCCC-CCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 999 5554 444567777777766666666666667999999999999999998543
No 89
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=2.1e-29 Score=275.65 Aligned_cols=253 Identities=15% Similarity=0.190 Sum_probs=161.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ .+. ....++++||+ .|++|.+++.+.+ .+++..++.++.||+.||+|||++||+|
T Consensus 50 ~E~~il~~~~h~~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~~ivH 124 (382)
T cd05625 50 AERDILAEADNEWVVRLYY-SFQ---DKDNLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKMGFIH 124 (382)
T ss_pred HHHHHHHhCCCCcCCeEEE-EEE---eCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3455788999999999888 443 23467888887 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||++..+............... +-...+|... +.......
T Consensus 125 rDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~---~~~~~~~~ 184 (382)
T cd05625 125 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHV-----------------RQDSMDFSNE---WGDPANCR 184 (382)
T ss_pred CCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccc-----------------cccccccccc---cccccccc
Confidence 999999999999999999999998643211000000000000 0000011000 00000000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
|. .... ....... ...........+||+.|+|||++.+..++.++|||||||++|||
T Consensus 185 ~~-------~~~~---------------~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 185 CG-------DRLK---------------PLERRAA-RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cc-------cccc---------------chhhhhc-cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 00 0000 0000000 00000011225799999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhccc--CCCchhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~ 328 (712)
++ ||.........+..+... ...+......+...++|.+|+ .+|.+|++ +.++++||||...
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 242 LVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 99 666544433333322211 111222234556668998876 59999997 9999999999874
No 90
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96 E-value=2.7e-29 Score=273.28 Aligned_cols=205 Identities=16% Similarity=0.193 Sum_probs=155.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++++++||||+.+++ ++. ....+++++|+ .|++|.+++... .+++..+..++.||+.||+|||++||+||
T Consensus 93 e~~il~~~~h~~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHr 166 (370)
T cd05596 93 ERDIMAHANSEWIVQLHY-AFQ---DDKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHR 166 (370)
T ss_pred HHHHHHhCCCCCcceEEE-EEe---cCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 455788999999999887 443 23457777777 599999998543 38899999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.+||+|||++.........
T Consensus 167 DLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~------------------------------------------------ 198 (370)
T cd05596 167 DVKPDNMLLDKSGHLKLADFGTCMKMDANGMV------------------------------------------------ 198 (370)
T ss_pred CCCHHHEEEcCCCCEEEEeccceeeccCCCcc------------------------------------------------
Confidence 99999999999999999999988432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC----CCCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~sDIwSlGvll 262 (712)
.....+|++.|+|||++.+. .++.++|||||||++
T Consensus 199 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvil 237 (370)
T cd05596 199 -----------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 237 (370)
T ss_pred -----------------------------------------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHH
Confidence 00114689999999998653 378999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~ 328 (712)
|||++ ||...... ..+..+...... +..........+||.+||..+|.+ |+|+.++++||||+..
T Consensus 238 yelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 238 YEMLVGDTPFYADSLV-GTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHhCCCCcCCCCHH-HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 99999 66544332 333333332211 111123445569999999999987 9999999999999864
No 91
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96 E-value=1.3e-29 Score=271.07 Aligned_cols=206 Identities=18% Similarity=0.255 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
.+..++..++||||+.+++ ++. ....++++||+ .|++|.+++... ..+++.+++.++.||+.||+|||+ +||+
T Consensus 44 ~e~~~l~~~~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~iv 118 (325)
T cd05594 44 TENRVLQNSRHPFLTALKY-SFQ---THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVV 118 (325)
T ss_pred HHHHHHHhCCCCCCCceEE-EEE---cCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 3445688899999999877 442 23467788887 589999988544 348999999999999999999998 7999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++...... .
T Consensus 119 HrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------------------------~-------------- 151 (325)
T cd05594 119 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------------------------A-------------- 151 (325)
T ss_pred ecCCCCCeEEECCCCCEEEecCCCCeecCCCC---------------------------------c--------------
Confidence 99999999999999999999999874211000 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (325)
T cd05594 152 -------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 188 (325)
T ss_pred -------------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccceeee
Confidence 0001468999999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||...... ..+..+..... .......+...+|+.+||..||++|+ ++.++++||||....
T Consensus 189 l~tG~~Pf~~~~~~-~~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 259 (325)
T cd05594 189 MMCGRLPFYNQDHE-KLFELILMEEI-RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV 259 (325)
T ss_pred eccCCCCCCCCCHH-HHHHHHhcCCC-CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence 999 66543322 22222222111 11112345566999999999999997 899999999998753
No 92
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96 E-value=5.3e-29 Score=267.80 Aligned_cols=204 Identities=18% Similarity=0.232 Sum_probs=148.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------------------- 76 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------------------- 76 (712)
.+..+|..+ +||||+.+++ ++. .....++++||| .|++|.++|....
T Consensus 59 ~E~~~l~~l~~h~niv~~~~-~~~--~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (338)
T cd05102 59 SELKILIHIGNHLNVVNLLG-ACT--KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDR 135 (338)
T ss_pred HHHHHHHHhccCcceeeEEe-Eec--CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcccc
Confidence 344566666 8999999887 443 223456666666 6999999984321
Q ss_pred ---------------------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEE
Q 005147 77 ---------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSF 123 (712)
Q Consensus 77 ---------------------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl 123 (712)
..+++.++..++.||+.||.|||++||+||||||+||+++.++.+|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl 215 (338)
T cd05102 136 RIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKI 215 (338)
T ss_pred ccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEE
Confidence 23777889999999999999999999999999999999999999999
Q ss_pred EecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccc
Q 005147 124 IESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGM 203 (712)
Q Consensus 124 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (712)
+|||+++...... .+
T Consensus 216 ~DfG~a~~~~~~~---------------------------------~~-------------------------------- 230 (338)
T cd05102 216 CDFGLARDIYKDP---------------------------------DY-------------------------------- 230 (338)
T ss_pred eecccccccccCc---------------------------------ch--------------------------------
Confidence 9999885421110 00
Q ss_pred ccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHH
Q 005147 204 QEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTM 279 (712)
Q Consensus 204 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~ 279 (712)
.......++..|+|||++.+..++.++|||||||++|||++ ||..........
T Consensus 231 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~ 287 (338)
T cd05102 231 -----------------------VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFC 287 (338)
T ss_pred -----------------------hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHH
Confidence 00001235678999999998889999999999999999985 555433222233
Q ss_pred HhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 280 SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
..+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 288 QRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 333333322222233445669999999999999999999976
No 93
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.96 E-value=6.6e-29 Score=256.68 Aligned_cols=207 Identities=17% Similarity=0.183 Sum_probs=155.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++... ..+++++|+ .|++|.+++.... .+++..++.++.||+.||.|||+.||+|
T Consensus 53 ~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~H 127 (263)
T cd06625 53 CEIQLLKNLQHERIVQYYG-CLRDD---ETLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNMIVH 127 (263)
T ss_pred HHHHHHHhCCCCCeeeeEE-EEccC---CeEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3445788999999999888 44322 366777776 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.++........ ..
T Consensus 128 ~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~-------------- 162 (263)
T cd06625 128 RDIKGANILRDSAGNVKLGDFGASKRLQTICSS-------------------------------GT-------------- 162 (263)
T ss_pred CCCCHHHEEEcCCCCEEEeecccceeccccccc-------------------------------cc--------------
Confidence 999999999999999999999987432111000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 163 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 200 (263)
T cd06625 163 ------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEM 200 (263)
T ss_pred ------------------------------------------cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHH
Confidence 00013568899999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...+..............+...........+++.+||..+|.+|||+.++++||||
T Consensus 201 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 201 LTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99 5544433322222222222222222233455699999999999999999999999997
No 94
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.1e-29 Score=257.87 Aligned_cols=227 Identities=18% Similarity=0.252 Sum_probs=169.8
Q ss_pred ccccccccccccCCCCCc-------ceeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC
Q 005147 4 RLLRGERFGVRGDDSNDF-------ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP 75 (712)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~ 75 (712)
+.+.|+.++|+=.|...- .|.+.| -++...|||||++|. +. .....+|++.|+ .||+|.+||-+.
T Consensus 39 HVFTGekVAVKviDKTKlD~~st~hlfqEVR---CMKLVQHpNiVRLYE-Vi---DTQTKlyLiLELGD~GDl~DyImKH 111 (864)
T KOG4717|consen 39 HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVR---CMKLVQHPNIVRLYE-VI---DTQTKLYLILELGDGGDLFDYIMKH 111 (864)
T ss_pred hhcccceeEEEEecccccchhhhhHHHHHHH---HHHHhcCcCeeeeee-hh---cccceEEEEEEecCCchHHHHHHhh
Confidence 456777777766554321 122222 356678999999776 43 445578888888 588999999776
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCC
Q 005147 76 KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 154 (712)
Q Consensus 76 ~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (712)
...+.+..+++||+||+.|+.|||...||||||||+|+++- .-|-||+.|||++-.+...+
T Consensus 112 e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~------------------ 173 (864)
T KOG4717|consen 112 EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK------------------ 173 (864)
T ss_pred hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc------------------
Confidence 66699999999999999999999999999999999999876 66999999999873321110
Q ss_pred CCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccccccccc
Q 005147 155 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 234 (712)
Q Consensus 155 ~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g 234 (712)
+.+..+|
T Consensus 174 -------------------------------------------------------------------------kL~TsCG 180 (864)
T KOG4717|consen 174 -------------------------------------------------------------------------KLTTSCG 180 (864)
T ss_pred -------------------------------------------------------------------------hhhcccc
Confidence 1122689
Q ss_pred CccccCcccccCCCCC-CccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCC
Q 005147 235 TNWYASPEELAGAPVS-CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 235 t~~Y~aPE~~~~~~~~-~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (712)
...|.|||++.|..|+ +++||||||||||.|+| ||....+ .+.+-.+....+.. ......+..+||..||..||
T Consensus 181 SLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND-SETLTmImDCKYtv-PshvS~eCrdLI~sMLvRdP 258 (864)
T KOG4717|consen 181 SLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND-SETLTMIMDCKYTV-PSHVSKECRDLIQSMLVRDP 258 (864)
T ss_pred hhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc-hhhhhhhhcccccC-chhhhHHHHHHHHHHHhcCc
Confidence 9999999999999986 68999999999999999 6653332 23333333332211 11123455599999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcC
Q 005147 311 SGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+|.+.++|..++|++....
T Consensus 259 kkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 259 KKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred hhhccHHHHhccccccCCCC
Confidence 99999999999999997644
No 95
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=1.6e-29 Score=270.85 Aligned_cols=207 Identities=16% Similarity=0.200 Sum_probs=156.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++...+|+||+.+++ ++.+ ...+++++|+ .|++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 50 ~e~~i~~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H 125 (330)
T cd05601 50 EERDILSISNSPWIPQLQY-AFQD---KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVH 125 (330)
T ss_pred HHHHHHHhCCCCCCcceee-EEec---CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 3445677889999999877 4432 3457777777 599999999665456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 126 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~----------------------------------------------- 158 (330)
T cd05601 126 RDIKPENVLIDRTGHIKLADFGSAARLTANKMV----------------------------------------------- 158 (330)
T ss_pred ccCchHheEECCCCCEEeccCCCCeECCCCCce-----------------------------------------------
Confidence 999999999999999999999988443211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc------CCCCCCccchHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYRLG 259 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~sDIwSlG 259 (712)
......|++.|+|||++. +..++.++||||||
T Consensus 159 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG 196 (330)
T cd05601 159 ------------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLG 196 (330)
T ss_pred ------------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeeccc
Confidence 001136899999999986 45588999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++|||++ ||...... ..+..+...... +......+...+|+.+||. +|.+|||+.++++||||...
T Consensus 197 ~il~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 197 VIAYEMIYGRSPFHEGTSA-KTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ceeeeeccCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 99999999 66544332 223333221111 1112234455699999998 99999999999999999864
No 96
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=7.7e-29 Score=264.94 Aligned_cols=200 Identities=16% Similarity=0.206 Sum_probs=153.0
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
.+..++||||+++++ ++. ....+|+++|+ .|++|..++... .+++.+++.++.||+.||.|||++||+|||||
T Consensus 55 ~~~~l~hp~i~~~~~-~~~---~~~~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlk 128 (324)
T cd05589 55 TANSERHPFLVNLFA-CFQ---TEDHVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHENKIVYRDLK 128 (324)
T ss_pred hccccCCCChhceee-EEE---cCCEEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCC
Confidence 356789999999887 443 23467777777 689999888443 48999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.+|++|||+++......
T Consensus 129 p~Nill~~~~~~kL~Dfg~~~~~~~~~----------------------------------------------------- 155 (324)
T cd05589 129 LDNLLLDTEGFVKIADFGLCKEGMGFG----------------------------------------------------- 155 (324)
T ss_pred HHHeEECCCCcEEeCcccCCccCCCCC-----------------------------------------------------
Confidence 999999999999999999874211000
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
......+|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 156 -------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~ 198 (324)
T cd05589 156 -------------------------------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGE 198 (324)
T ss_pred -------------------------------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCC
Confidence 00011468999999999998889999999999999999998
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
||...... .....+..... .......+...++|.+||..||.+|| ++.++++||||...
T Consensus 199 ~pf~~~~~~-~~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 199 SPFPGDDEE-EVFDSIVNDEV-RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCCCCCCHH-HHHHHHHhCCC-CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 66544332 22222222211 11112234556999999999999999 69999999999875
No 97
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=3.5e-29 Score=268.17 Aligned_cols=202 Identities=18% Similarity=0.262 Sum_probs=149.4
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++.. .+||||+++++ ++.. ...+++++|+ .|++|..++... ..+++..++.|+.||+.||+|||++||+||||
T Consensus 48 ~l~~~~~hp~iv~~~~-~~~~---~~~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Di 122 (329)
T cd05618 48 VFEQASNHPFLVGLHS-CFQT---ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDL 122 (329)
T ss_pred HHHhcCCCCcCCceee-EEEe---CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 3443 48999999887 4432 2356667766 689999988544 34999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.++|+|||+++..-... +
T Consensus 123 kp~Nili~~~~~~kL~DfG~~~~~~~~~---------------------------------~------------------ 151 (329)
T cd05618 123 KLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------------ 151 (329)
T ss_pred CHHHEEECCCCCEEEeeCCccccccCCC---------------------------------C------------------
Confidence 9999999999999999999874210000 0
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (329)
T cd05618 152 ---------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 192 (329)
T ss_pred ---------------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhC
Confidence 0011468999999999999999999999999999999999
Q ss_pred --CCCCC--------hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC------HHHHhcCcCCCCC
Q 005147 268 --PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (712)
Q Consensus 268 --pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~eiL~hp~~~~~ 328 (712)
||... .........+..... .......+...+++.+||..||.+||+ +.++++||||...
T Consensus 193 ~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 193 RSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCCccCCCcCCcccccHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 55310 001111122222111 111123345569999999999999998 5899999999764
No 98
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=4.6e-29 Score=261.09 Aligned_cols=205 Identities=17% Similarity=0.226 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++|||++++++ ++. ....+++++++.+++|.+++......+++..++.++.||+.||.|||++||+||
T Consensus 48 ~ei~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~ 123 (284)
T cd07839 48 REICLLKELKHKNIVRLYD-VLH---SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHR 123 (284)
T ss_pred HHHHHHHhcCCCCeeeHHH-Hhc---cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 3555788899999999888 443 234678899998889999886555569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++...+.... .+
T Consensus 124 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------~~--------------- 156 (284)
T cd07839 124 DLKPQNLLINKNGELKLADFGLARAFGIPVR--------------------------------CY--------------- 156 (284)
T ss_pred CCCHHHEEEcCCCcEEECccchhhccCCCCC--------------------------------Cc---------------
Confidence 9999999999999999999998854321100 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
....++..|+|||.+.+.. ++.++|||||||++|+|
T Consensus 157 -------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 193 (284)
T cd07839 157 -------------------------------------------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 193 (284)
T ss_pred -------------------------------------------CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHH
Confidence 0134688999999987754 79999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc-------------------cCCCc---------hhhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH-------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-------------------~~~~~---------~~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ |+............+.. ...+. ......+...+|+.+||..||.+||
T Consensus 194 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 273 (284)
T cd07839 194 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRI 273 (284)
T ss_pred HhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcC
Confidence 97 55443332222211110 00000 0011234455999999999999999
Q ss_pred CHHHHhcCcCC
Q 005147 315 KMGELLQSEFL 325 (712)
Q Consensus 315 t~~eiL~hp~~ 325 (712)
|+.++++||||
T Consensus 274 t~~~il~h~~f 284 (284)
T cd07839 274 SAEEALQHPYF 284 (284)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 99
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=4.9e-29 Score=265.48 Aligned_cols=199 Identities=18% Similarity=0.267 Sum_probs=152.1
Q ss_pred cCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCc
Q 005147 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (712)
Q Consensus 34 ~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~N 112 (712)
..+||||+.+++ ++. ....++++||+ .|++|.+++.... .+++.++..++.||+.||+|||++||+||||||+|
T Consensus 52 ~~~~~~i~~~~~-~~~---~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~N 126 (316)
T cd05620 52 AWENPFLTHLYC-TFQ---TKEHLFFVMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDN 126 (316)
T ss_pred ccCCCCccCeeE-EEE---eCCEEEEEECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence 468999999887 442 23467788887 5899999985543 48999999999999999999999999999999999
Q ss_pred eeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCc
Q 005147 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (712)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~ 192 (712)
|+++.++.++++|||+++......
T Consensus 127 il~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------------------- 150 (316)
T cd05620 127 VMLDRDGHIKIADFGMCKENVFGD-------------------------------------------------------- 150 (316)
T ss_pred eEECCCCCEEeCccCCCeecccCC--------------------------------------------------------
Confidence 999999999999999874210000
Q ss_pred cccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CC
Q 005147 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (712)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf 269 (712)
.......|++.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 151 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf 196 (316)
T cd05620 151 ----------------------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred ----------------------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCC
Confidence 00011468999999999999899999999999999999998 66
Q ss_pred CCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-HHHhcCcCCCCCc
Q 005147 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEPR 329 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~eiL~hp~~~~~~ 329 (712)
..... ......+.... +.......++..+++.+||..||.+||++ +++++||||....
T Consensus 197 ~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 197 HGDDE-DELFESIRVDT-PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred CCCCH-HHHHHHHHhCC-CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 54433 23333333221 11111233455699999999999999997 5899999998753
No 100
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=5.6e-29 Score=260.33 Aligned_cols=207 Identities=16% Similarity=0.183 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..++..++|+||+.+++ ++.. ...++++||+ .|++|..++. .....+++.++..++.||+.||+|||++|
T Consensus 42 ~E~~il~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 117 (280)
T cd05608 42 VEKRILAKVHSRFIVSLAY-AFQT---KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR 117 (280)
T ss_pred HHHHHHHhCCCCcEeeeeE-EEcC---CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3555788999999999776 4432 2456777776 6999998772 23445899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.++++|||++........
T Consensus 118 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 152 (280)
T cd05608 118 IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--------------------------------------------- 152 (280)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 153 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il 187 (280)
T cd05608 153 ---------------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTL 187 (280)
T ss_pred ---------------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHH
Confidence 00013578999999999999999999999999999
Q ss_pred HHhhC---CCCCChhh---HHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|||++ ||...... ......+... +..... ..+...+++.+||+.||++|| +++++++||||+...
T Consensus 188 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 188 YEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred HHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 99998 66543221 1111111111 111112 234556999999999999999 889999999998754
No 101
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.96 E-value=3.4e-29 Score=272.29 Aligned_cols=206 Identities=17% Similarity=0.209 Sum_probs=153.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ .+. ....+++++|+ .|++|.+++... .+++..++.++.||+.||+|||++||+|
T Consensus 92 ~e~~i~~~~~hp~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvH 165 (370)
T cd05621 92 EERDIMAFANSPWVVQLFC-AFQ---DDKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIH 165 (370)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEE---cCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 3455778899999999887 443 23467788887 599999999543 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||++.........
T Consensus 166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~----------------------------------------------- 198 (370)
T cd05621 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV----------------------------------------------- 198 (370)
T ss_pred cCCCHHHEEECCCCCEEEEecccceecccCCce-----------------------------------------------
Confidence 999999999999999999999988433111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 261 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvl 261 (712)
.....+||+.|+|||++.+.. ++.++|||||||+
T Consensus 199 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i 236 (370)
T cd05621 199 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred ------------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH
Confidence 001146899999999997543 7899999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCC---CchhhhcCchhHHHHHHcCCCCCC--CCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPS--GRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~--~Rpt~~eiL~hp~~~~~ 328 (712)
+|||++ ||...... ..+..+..... .+..........+++.+||..+|. .|+|+.++++||||+..
T Consensus 237 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 237 LFEMLVGDTPFYADSLV-GTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 999999 66554432 23333332211 111122344556899999985554 38999999999999874
No 102
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=6.3e-29 Score=264.68 Aligned_cols=198 Identities=17% Similarity=0.246 Sum_probs=151.3
Q ss_pred cCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCc
Q 005147 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (712)
Q Consensus 34 ~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~N 112 (712)
..+||||+++++ ++. ....+++++|+ .|++|.+++.... .+++.++..++.||+.||.|||++||+||||||+|
T Consensus 52 ~~~hp~i~~~~~-~~~---~~~~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~N 126 (316)
T cd05592 52 AWEHPFLTHLFC-TFQ---TKEHLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDN 126 (316)
T ss_pred ccCCCCccceee-EEE---cCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence 468999999887 442 23457777777 5999999985543 48999999999999999999999999999999999
Q ss_pred eeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCc
Q 005147 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (712)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~ 192 (712)
|+++.++.+||+|||++.......
T Consensus 127 ill~~~~~~kL~Dfg~a~~~~~~~-------------------------------------------------------- 150 (316)
T cd05592 127 VLLDKDGHIKIADFGMCKENMNGE-------------------------------------------------------- 150 (316)
T ss_pred eEECCCCCEEEccCcCCeECCCCC--------------------------------------------------------
Confidence 999999999999999884321000
Q ss_pred cccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CC
Q 005147 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (712)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf 269 (712)
......+||+.|+|||.+.+..++.++|||||||++|||++ ||
T Consensus 151 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf 196 (316)
T cd05592 151 ----------------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred ----------------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCC
Confidence 00011468999999999998889999999999999999998 66
Q ss_pred CCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-HHHhcCcCCCCC
Q 005147 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 328 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~eiL~hp~~~~~ 328 (712)
...... .....+... .+...........+|+.+||..+|.+||++ .++++||||...
T Consensus 197 ~~~~~~-~~~~~i~~~-~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 197 HGEDED-ELFDSILND-RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CCCCHH-HHHHHHHcC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 544332 233333222 111111223445699999999999999986 588999999864
No 103
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.96 E-value=7e-29 Score=264.90 Aligned_cols=201 Identities=16% Similarity=0.238 Sum_probs=153.1
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++.. .+||||+.+++ ++.. ...++++||+ .|++|..++.+. +.+++..++.++.||+.||.|||++||+||||
T Consensus 48 il~~~~~hp~i~~~~~-~~~~---~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDi 122 (321)
T cd05591 48 ILALAAKHPFLTALHC-CFQT---KDRLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL 122 (321)
T ss_pred HHHhccCCCCccceee-EEEc---CCeEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 3443 48999999887 4432 3457777777 589999988544 34899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.++|+|||++.......
T Consensus 123 kp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------------- 150 (321)
T cd05591 123 KLDNILLDAEGHCKLADFGMCKEGILNG---------------------------------------------------- 150 (321)
T ss_pred CHHHeEECCCCCEEEeecccceecccCC----------------------------------------------------
Confidence 9999999999999999999874311000
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 151 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg 192 (321)
T cd05591 151 --------------------------------------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAG 192 (321)
T ss_pred --------------------------------------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcC
Confidence 00011468999999999998889999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-------CHHHHhcCcCCCCC
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEP 328 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-------t~~eiL~hp~~~~~ 328 (712)
||...... .....+...... ......+...+++.+||..+|.+|| ++.++++||||...
T Consensus 193 ~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 193 QPPFEADNED-DLFESILHDDVL-YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred CCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 66544433 333333332211 1111234556999999999999999 89999999999764
No 104
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=6.8e-29 Score=259.24 Aligned_cols=207 Identities=16% Similarity=0.193 Sum_probs=154.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++||||+.+++ .+.. ...+++++|+ .|++|.+++.. ....+++..+..++.||+.||+|||+.||+|
T Consensus 43 E~~il~~l~hp~i~~~~~-~~~~---~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 118 (277)
T cd05607 43 EKEILEKVNSPFIVNLAY-AFES---KTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVY 118 (277)
T ss_pred HHHHHHhcCCCcEEEEEE-EEec---CCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 456789999999999877 4432 3456777776 58999988833 3345889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.......
T Consensus 119 ~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------- 149 (277)
T cd05607 119 RDMKPENVLLDDQGNCRLSDLGLAVELKDGK------------------------------------------------- 149 (277)
T ss_pred ccCChHhEEEcCCCCEEEeeceeeeecCCCc-------------------------------------------------
Confidence 9999999999999999999999874321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||++.+..++.++|||||||++|||
T Consensus 150 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el 187 (277)
T cd05607 150 ------------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEM 187 (277)
T ss_pred ------------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhh---HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~~ 329 (712)
++ ||...... ............+.......+...+++.+||+.||.+||++ ++++.||||+...
T Consensus 188 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 188 VAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred HhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 98 65443221 11222222212211112234455699999999999999999 6788999998753
No 105
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=3.3e-29 Score=267.91 Aligned_cols=202 Identities=19% Similarity=0.213 Sum_probs=154.5
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++++.++||||+++++ .+.. ...+++++|+ .|++|..++.+. ..+++.++..++.||+.||+|||++||+||||
T Consensus 48 ~~l~~~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 48 VLLKNVKHPFLVGLHY-SFQT---TEKLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCccEEE-EEec---CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 3577899999999877 4422 3456777776 689999988544 34899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+|||++.++.++|+|||+++......
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------------------------- 150 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCKEGIAQS---------------------------------------------------- 150 (325)
T ss_pred CHHHeEECCCCCEEEeecCCcccCCCCC----------------------------------------------------
Confidence 9999999999999999999874210000
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 151 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G 192 (325)
T cd05604 151 --------------------------------------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred --------------------------------------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcC
Confidence 00011468999999999999999999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCC
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~ 328 (712)
||...... .....+..... ...........+++.+||..+|.+||++ .++++||||...
T Consensus 193 ~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 193 LPPFYCRDVA-EMYDNILHKPL-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHcCCc-cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 66544332 23333332221 1111234455599999999999999976 589999999864
No 106
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.96 E-value=8.9e-29 Score=263.47 Aligned_cols=199 Identities=19% Similarity=0.260 Sum_probs=152.2
Q ss_pred cCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCc
Q 005147 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (712)
Q Consensus 34 ~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~N 112 (712)
..+||||+.+++ ++. ....+++++|| .|++|.+++... ..+++.++..++.||+.||.|||++||+||||||+|
T Consensus 52 ~~~hp~iv~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~N 126 (316)
T cd05619 52 AWEHPFLTHLYC-TFQ---TKENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDN 126 (316)
T ss_pred ccCCCcCcceEE-EEE---eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHH
Confidence 369999999887 442 23457777777 689999999554 348999999999999999999999999999999999
Q ss_pred eeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCc
Q 005147 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (712)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~ 192 (712)
|+++.++.++++|||++........
T Consensus 127 il~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------------- 151 (316)
T cd05619 127 ILLDTDGHIKIADFGMCKENMLGDA------------------------------------------------------- 151 (316)
T ss_pred EEECCCCCEEEccCCcceECCCCCC-------------------------------------------------------
Confidence 9999999999999998742100000
Q ss_pred cccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CC
Q 005147 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (712)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf 269 (712)
......|++.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 152 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf 196 (316)
T cd05619 152 -----------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPF 196 (316)
T ss_pred -----------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCC
Confidence 0011468999999999998889999999999999999999 66
Q ss_pred CCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH-HHhcCcCCCCCc
Q 005147 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEPR 329 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-eiL~hp~~~~~~ 329 (712)
..... ......+.... +...........+|+.+||..+|.+||++. ++++||||....
T Consensus 197 ~~~~~-~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 197 HGHDE-EELFQSIRMDN-PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CCCCH-HHHHHHHHhCC-CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 54433 23333333221 111112234456999999999999999996 899999998854
No 107
>PHA02988 hypothetical protein; Provisional
Probab=99.96 E-value=7.6e-29 Score=259.78 Aligned_cols=199 Identities=17% Similarity=0.126 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccc-cccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gI 103 (712)
++..+|..++||||+++++ ++.+. .....+++++|+ .|++|.+++.+. ..+++.....++.|++.||.|||+ .|+
T Consensus 67 ~E~~~l~~l~h~nIv~~~g-~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~ 144 (283)
T PHA02988 67 NEIKNLRRIDSNNILKIYG-FIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNK 144 (283)
T ss_pred HHHHHHHhcCCCCEEEEee-eEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCC
Confidence 5567899999999999998 44331 223356677777 689999999654 358999999999999999999998 599
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+|++|||+++.....
T Consensus 145 ~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 176 (283)
T PHA02988 145 PYKNLTSVSFLVTENYKLKIICHGLEKILSSP------------------------------------------------ 176 (283)
T ss_pred CCCcCChhhEEECCCCcEEEcccchHhhhccc------------------------------------------------
Confidence 99999999999999999999999987432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--CCCCCccchHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVL 261 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvl 261 (712)
....+|+..|+|||++.+ ..++.++|||||||+
T Consensus 177 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvi 211 (283)
T PHA02988 177 ---------------------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVV 211 (283)
T ss_pred ---------------------------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHH
Confidence 000357889999999976 579999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhc-ccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+|||++ ||....... ....+. ....++......+...+|+.+||+.||.+|||+.++++
T Consensus 212 l~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 212 LWEIFTGKIPFENLTTKE-IYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHCCCCCCCCCHHH-HHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 999999 776544332 223332 22222222233455669999999999999999999986
No 108
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=1.7e-29 Score=269.19 Aligned_cols=205 Identities=18% Similarity=0.228 Sum_probs=157.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|..++||||+++++ ++.. ...+++++|+ .|++|.+++.+.. .+++.+++.++.||+.||.|||++||+|
T Consensus 47 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 47 MERDILAEVNHPFIVKLHY-AFQT---EGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred HHHHHHHhCCCCCcccEEE-EEEc---CCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 4556789999999999887 4432 3457777777 5899999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------ 153 (318)
T cd05582 122 RDLKPENILLDEEGHIKLTDFGLSKESIDHEK------------------------------------------------ 153 (318)
T ss_pred CCCCHHHeEECCCCcEEEeeccCCcccCCCCC------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|||
T Consensus 154 ------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el 191 (318)
T cd05582 154 ------------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 191 (318)
T ss_pred ------------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeee
Confidence 00114689999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
++ ||...... ..+..+...... ......+...++|.+||+.||.+||+ +.++++||||...
T Consensus 192 ~tg~~p~~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 192 LTGSLPFQGKDRK-ETMTMILKAKLG-MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ccCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 99 66544332 233333222211 11122345569999999999999999 7789999999864
No 109
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=4e-29 Score=272.95 Aligned_cols=251 Identities=12% Similarity=0.133 Sum_probs=157.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+++++ ++. ....+++++|+ .|++|.+++... ..+++..++.++.||+.||+|||++||+||
T Consensus 51 E~~il~~l~hp~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHr 125 (377)
T cd05629 51 ERDVLAESDSPWVVSLYY-SFQ---DAQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHR 125 (377)
T ss_pred HHHHHHhCCCCCcceEEE-EEE---cCCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 445788899999999887 443 23467888887 599999999554 448999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.++++|||+++.+........+ .. ..... .. ...........+
T Consensus 126 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~-~~-~~~~~-------------------~~---~~~~~~~~~~~~ 181 (377)
T cd05629 126 DIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY-QK-LLQGK-------------------SN---KNRIDNRNSVAV 181 (377)
T ss_pred CCCHHHEEECCCCCEEEeecccccccccccccccc-cc-ccccc-------------------cc---cccccccccccc
Confidence 99999999999999999999998643221100000 00 00000 00 000000000000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
... .... ....+..+. ...........+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 182 ~~~------~~~~---~~~~~~~~~----------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 242 (377)
T cd05629 182 DSI------NLTM---SSKDQIATW----------KKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECL 242 (377)
T ss_pred ccc------cccc---cchhhhhhh----------hhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhh
Confidence 000 0000 000000000 000000111257999999999999888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhccc---CCCchhhhcCchhHHHHHHcCCCCCCCC---CCHHHHhcCcCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~eiL~hp~~~~~ 328 (712)
+ ||...... ..+..+... ...+......+...+||.+||. +|.+| +|+.++++||||+..
T Consensus 243 tG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 243 IGWPPFCSENSH-ETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred cCCCCCCCCCHH-HHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9 55443332 223333221 1111111234556699999997 67665 599999999999864
No 110
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=2.5e-29 Score=274.48 Aligned_cols=248 Identities=13% Similarity=0.174 Sum_probs=159.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ .+. ....++++||+ .|++|.+++.+.+ .+++..++.++.||+.||+|||++||+|
T Consensus 50 ~E~~il~~l~h~~iv~~~~-~~~---~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH 124 (376)
T cd05598 50 AERDILAEADNEWVVKLYY-SFQ---DKDNLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKMGFIH 124 (376)
T ss_pred HHHHHHHhCCCCCcceEEE-EEE---cCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4555788999999999887 443 23467788887 5999999995544 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.++|+|||++..+.......-+ . ..+. ....+.
T Consensus 125 rDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~-----~--------------------~~~~--------~~~~~~ 171 (376)
T cd05598 125 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY-----Q--------------------KGDH--------HRQDSM 171 (376)
T ss_pred CCCCHHHEEECCCCCEEEEeCCCCcccccccccccc-----c--------------------cccc--------cccccc
Confidence 999999999999999999999998543211000000 0 0000 000000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ...... + .......... . ..............+||+.|+|||++.+..++.++|||||||++|||
T Consensus 172 ~--~~~~~~------~-~~~~~~~~~~----~-~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 172 E--PSEEWS------E-IDRCRLKPLE----R-RRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred c--cccccc------c-cccccccchh----h-hhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0 000000 0 0000000000 0 00000000111235799999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhccc---CCCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~ 328 (712)
++ ||........ ...+... ...+......+...++|.+|+ .+|.+|+ |+.++++||||...
T Consensus 238 l~G~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 238 LVGQPPFLADTPAET-QLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred hhCCCCCCCCCHHHH-HHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 99 6654443322 2222211 111111223455668999876 5999999 99999999999874
No 111
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.2e-29 Score=266.36 Aligned_cols=194 Identities=20% Similarity=0.223 Sum_probs=147.5
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
+.+...+|||++.+.+ +|.+. .+.+++||. .|+-|.+.+..... .. .++..|++||+.||+|||++|||||||
T Consensus 368 ~~~~~~~h~niv~~~~-v~~~~---~~~~~v~e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~gvvhRDL 441 (612)
T KOG0603|consen 368 ISLLVRDHPNIVKSHD-VYEDG---KEIYLVMELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQGVVHRDL 441 (612)
T ss_pred hhhhhcCCCcceeecc-eecCC---ceeeeeehhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence 5577789999999877 76443 345666666 56666665633332 33 788899999999999999999999999
Q ss_pred CCCceee-cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 109 RPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 109 kP~NIll-~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
||+|||+ +..++++|+|||.++....+ |
T Consensus 442 kp~NIL~~~~~g~lrltyFG~a~~~~~~--------------------------------------------------~- 470 (612)
T KOG0603|consen 442 KPGNILLDGSAGHLRLTYFGFWSELERS--------------------------------------------------C- 470 (612)
T ss_pred ChhheeecCCCCcEEEEEechhhhCchh--------------------------------------------------h-
Confidence 9999999 58899999999988432111 0
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
...+=|..|.|||++....|+.++||||||++||+||+
T Consensus 471 ------------------------------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~ 508 (612)
T KOG0603|consen 471 ------------------------------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT 508 (612)
T ss_pred ------------------------------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh
Confidence 00234788999999998899999999999999999999
Q ss_pred ---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||.........+..+....+ -...+..+.+|+.+||+.||.+||++.+++.||||
T Consensus 509 G~tp~~~~P~~~ei~~~i~~~~~---s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 509 GRTLFAAHPAGIEIHTRIQMPKF---SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCCccccCCchHHHHHhhcCCcc---ccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 55444333333433333222 23344555699999999999999999999999999
No 112
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.3e-30 Score=293.69 Aligned_cols=213 Identities=20% Similarity=0.223 Sum_probs=174.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++.-+|..++|||+|..|+ + +...+.++|.|||| ||+|.+.+ ..++..++...+.+..|++.||.|||++||||
T Consensus 1283 eEm~vlE~lnHpNlV~YyG-V---EvHRekv~IFMEyC~~GsLa~ll-~~gri~dE~vt~vyt~qll~gla~LH~~gIVH 1357 (1509)
T KOG4645|consen 1283 EEMKVLEGLNHPNLVRYYG-V---EVHREKVYIFMEYCEGGSLASLL-EHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVH 1357 (1509)
T ss_pred HHHHHHHhccCccccccCc-e---eecHHHHHHHHHHhccCcHHHHH-HhcchhhhhHHHHHHHHHHHHHHHHHhcCcee
Confidence 5667899999999999666 3 44555677888885 99999988 44556889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.+|.+||.|||.+......
T Consensus 1358 RDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~-------------------------------------------------- 1387 (1509)
T KOG4645|consen 1358 RDIKPANILLDFNGLIKYGDFGSAVKIKNN-------------------------------------------------- 1387 (1509)
T ss_pred cCCCccceeeecCCcEEeecccceeEecCc--------------------------------------------------
Confidence 999999999999999999999988432111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvll 262 (712)
.+++|......+||+.|||||++.+.. ..-++|||||||+.
T Consensus 1388 ------------------------------------~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVV 1431 (1509)
T KOG4645|consen 1388 ------------------------------------AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVV 1431 (1509)
T ss_pred ------------------------------------hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceE
Confidence 011111222378999999999997654 67799999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.||.| ||...+...+.|..+.-+..|+......+...+||..||..||+.|.++.|+|.|.|-+...+
T Consensus 1432 lEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1432 LEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred EEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence 99999 777777778888888777777766666677779999999999999999999999998776544
No 113
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=4e-29 Score=247.80 Aligned_cols=226 Identities=17% Similarity=0.213 Sum_probs=169.1
Q ss_pred ccccccccccCCCC----CcceeeeccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCC
Q 005147 6 LRGERFGVRGDDSN----DFELRKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRS 78 (712)
Q Consensus 6 ~~~~~~~~~~~~~~----~~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~ 78 (712)
+.+.+++++..... .+.-|+.|+...+.+++|+|+++++. +|.... ....++++||+...+|.+.+. -.
T Consensus 39 v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n-~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~---~e 114 (369)
T KOG0665|consen 39 VLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLN-VFTPQKTLEEFQEVYLVMELMDANLCQVIL---ME 114 (369)
T ss_pred hccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeee-ccCccccHHHHHhHHHHHHhhhhHHHHHHH---Hh
Confidence 34555555555443 23348899999999999999999998 554333 334789999999999999884 23
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 79 l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
++-..+..|+.|++.|+.|||+.||+||||||+||++..+..+|+.|||+++..+.+
T Consensus 115 lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~----------------------- 171 (369)
T KOG0665|consen 115 LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD----------------------- 171 (369)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-----------------------
Confidence 678889999999999999999999999999999999999999999999998432211
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
| ..+.++.|..|
T Consensus 172 ------------~--------------------------------------------------------~mtpyVvtRyy 183 (369)
T KOG0665|consen 172 ------------F--------------------------------------------------------MMTPYVVTRYY 183 (369)
T ss_pred ------------c--------------------------------------------------------ccCchhheeec
Confidence 1 11226889999
Q ss_pred cCcccccCCCCCCccchHHHHHHHHHhhCC--CCCChhhHHHHHhhcc--------------------------------
Q 005147 239 ASPEELAGAPVSCASDIYRLGVLLFELFCP--FSTGEEKTRTMSSLRH-------------------------------- 284 (712)
Q Consensus 239 ~aPE~~~~~~~~~~sDIwSlGvll~eLl~p--f~~~~~~~~~~~~~~~-------------------------------- 284 (712)
+|||++.+..|...+||||+||++.||+++ ++++......+..+..
T Consensus 184 rapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f 263 (369)
T KOG0665|consen 184 RAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISF 263 (369)
T ss_pred cCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccch
Confidence 999999999999999999999999999982 2223222222211110
Q ss_pred -cCCC-----chhhhc---CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 285 -RVLP-----PQLLLK---FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 285 -~~~~-----~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
..+| ...... .....+++.+||..+|++|.+++++|+||||+
T Consensus 264 ~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 264 SELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0111 111111 11223899999999999999999999999997
No 114
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=9.6e-29 Score=263.51 Aligned_cols=202 Identities=19% Similarity=0.234 Sum_probs=153.5
Q ss_pred eeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 30 VELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
.++..+ +||||+++++ ++.. ...+++++|+ .|++|..++.+.+ .+++.++..++.||+.||.|||++||+|||
T Consensus 47 ~il~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d 121 (318)
T cd05570 47 RVLALAGKHPFLTQLHS-CFQT---KDRLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGIIYRD 121 (318)
T ss_pred HHHHhccCCCCccceee-EEEc---CCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEccC
Confidence 345444 7999999887 4432 3457778777 5899999885543 499999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.++++|||+++...... .
T Consensus 122 lkp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------------------------~---------------- 151 (318)
T cd05570 122 LKLDNVLLDSEGHIKIADFGMCKEGILGG----------------------------------V---------------- 151 (318)
T ss_pred CCHHHeEECCCCcEEecccCCCeecCcCC----------------------------------C----------------
Confidence 99999999999999999999874210000 0
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
.....+|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 152 ----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~ 191 (318)
T cd05570 152 ----------------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191 (318)
T ss_pred ----------------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh
Confidence 0001468999999999999999999999999999999998
Q ss_pred ---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-----HHHhcCcCCCCC
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~eiL~hp~~~~~ 328 (712)
||...... .....+..... ...........+|+.+||..||.+|||+ .++++||||...
T Consensus 192 G~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 192 GQSPFEGDDED-ELFQSILEDEV-RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CCCCCCCCCHH-HHHHHHHcCCC-CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 66544332 22333322211 1111223455599999999999999999 999999999874
No 115
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=1.1e-28 Score=263.44 Aligned_cols=201 Identities=18% Similarity=0.223 Sum_probs=153.1
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
++..++||||+++++ .+.+ ...+++++|+ .|++|..++... ..+++.++..++.||+.||+|||++||+|||||
T Consensus 49 ~l~~~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlk 123 (321)
T cd05603 49 LLKNLKHPFLVGLHY-SFQT---AEKLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLK 123 (321)
T ss_pred HHHhCCCCCccceee-EEEc---CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence 577899999999877 4422 2356777777 589999988543 348999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.+||+|||+++......
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------- 150 (321)
T cd05603 124 PENILLDSQGHVVLTDFGLCKEGVEPE----------------------------------------------------- 150 (321)
T ss_pred HHHeEECCCCCEEEccCCCCccCCCCC-----------------------------------------------------
Confidence 999999999999999999874311100
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
.......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 151 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (321)
T cd05603 151 -------------------------------------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGL 193 (321)
T ss_pred -------------------------------------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCC
Confidence 00011468999999999998889999999999999999998
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~ 328 (712)
||...... .....+..... ...........+++.+||+.+|.+||++ .++++|+||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 194 PPFYSRDVS-QMYDNILHKPL-QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCCCHH-HHHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 66544322 33333333221 1112234455699999999999999875 599999999864
No 116
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95 E-value=1.2e-28 Score=263.39 Aligned_cols=204 Identities=17% Similarity=0.248 Sum_probs=152.2
Q ss_pred cceeeccCCCCC-cccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLR-NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~n-i~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|++ |+.+++ ++.. .+.++++||+ .|++|.+++.... .+++.+++.++.||+.||+|||++||+|
T Consensus 50 e~~~l~~~~~~~~i~~~~~-~~~~---~~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05587 50 EKRVLALPGKPPFLTQLHS-CFQT---MDRLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKGIIY 124 (324)
T ss_pred HHHHHHhcCCCCceeeeEE-EEEc---CCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 344567777766 555444 4422 3457777777 6999999985543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.++|+|||++.......
T Consensus 125 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------- 155 (324)
T cd05587 125 RDLKLDNVMLDAEGHIKIADFGMCKENIFGG------------------------------------------------- 155 (324)
T ss_pred cCCCHHHeEEcCCCCEEEeecCcceecCCCC-------------------------------------------------
Confidence 9999999999999999999999874211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||++.+..++.++|||||||++|||
T Consensus 156 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el 194 (324)
T cd05587 156 -----------------------------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 194 (324)
T ss_pred -----------------------------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHH
Confidence 000114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-----HHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~eiL~hp~~~~~ 328 (712)
++ ||...... .....+..... .......+...+++.+||..+|.+|++. +++++||||...
T Consensus 195 ltG~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 195 LAGQPPFDGEDED-ELFQSIMEHNV-SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 98 66544332 23333332221 1111233455699999999999999976 899999999874
No 117
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.95 E-value=5.9e-29 Score=266.53 Aligned_cols=197 Identities=17% Similarity=0.224 Sum_probs=149.1
Q ss_pred CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCcee
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIl 114 (712)
+||||+++++ .+.. ...+++++|+ .|++|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 54 ~~p~i~~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nil 128 (330)
T cd05586 54 ESPFIVGLKF-SFQT---DSDLYLVTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENIL 128 (330)
T ss_pred CCCcCcceEE-EEec---CCeEEEEEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeE
Confidence 7999999877 4422 2456777777 689999998554 34899999999999999999999999999999999999
Q ss_pred ecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccc
Q 005147 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (712)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~ 194 (712)
++.++.++|+|||++....... .
T Consensus 129 i~~~~~~kl~Dfg~a~~~~~~~---------------------------------~------------------------ 151 (330)
T cd05586 129 LDATGHIALCDFGLSKANLTDN---------------------------------K------------------------ 151 (330)
T ss_pred ECCCCCEEEecCCcCcCCCCCC---------------------------------C------------------------
Confidence 9999999999999874311100 0
Q ss_pred cccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHhhC---CCC
Q 005147 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFS 270 (712)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eLl~---pf~ 270 (712)
......|++.|+|||++.+.. ++.++|||||||++|+|++ ||.
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~ 198 (330)
T cd05586 152 ---------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFY 198 (330)
T ss_pred ---------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCC
Confidence 001146899999999997654 8999999999999999998 665
Q ss_pred CChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC----CHHHHhcCcCCCCC
Q 005147 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP 328 (712)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~eiL~hp~~~~~ 328 (712)
..... ..+..+.............+...+|+.+||..+|.+|| ++.++++||||...
T Consensus 199 ~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 199 AEDTQ-QMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 44332 33333332222111111234556999999999999998 79999999999864
No 118
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.95 E-value=1.1e-28 Score=263.86 Aligned_cols=201 Identities=17% Similarity=0.199 Sum_probs=153.1
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+++.++||||+++++ .+.. ...+++++|+ .|++|.+++.... .+++..++.++.||+.||+|||++||+|||||
T Consensus 49 ~l~~~~h~~Iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlk 123 (325)
T cd05602 49 LLKNVKHPFLVGLHF-SFQT---ADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLK 123 (325)
T ss_pred HHHhCCCCCCCceeE-EEEc---CCeEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence 467899999999877 4422 3456777776 5889999995543 48899999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.++++|||+++......
T Consensus 124 p~Nili~~~~~~kl~DfG~a~~~~~~~----------------------------------------------------- 150 (325)
T cd05602 124 PENILLDSQGHIVLTDFGLCKENIEHN----------------------------------------------------- 150 (325)
T ss_pred HHHeEECCCCCEEEccCCCCcccccCC-----------------------------------------------------
Confidence 999999999999999999874321000
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
......+|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 151 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (325)
T cd05602 151 -------------------------------------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred -------------------------------------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCC
Confidence 00011468999999999999899999999999999999999
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH----HHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~----eiL~hp~~~~~ 328 (712)
||...... ..+..+...... ......+...+++.+||+.+|.+||++. ++++|+||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 194 PPFYSRNTA-EMYDNILNKPLQ-LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCCCHH-HHHHHHHhCCcC-CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 66544332 333333322111 1122334555999999999999999865 89999999764
No 119
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=5.4e-29 Score=227.08 Aligned_cols=211 Identities=17% Similarity=0.230 Sum_probs=168.9
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
..|+.-+|+.+.|+|||++++ +.. ....+-++++++..+|..+.+.-++.++.+.++.++.|++.||.|||++++.
T Consensus 48 alreicllkelkhknivrl~d-vlh---sdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvl 123 (292)
T KOG0662|consen 48 ALREICLLKELKHKNIVRLHD-VLH---SDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVL 123 (292)
T ss_pred HHHHHHHHHHhhhcceeehhh-hhc---cCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 447778899999999999998 432 3456889999999999999988777799999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||.|.+|+.+|.+|++|||+++.+|.+... |
T Consensus 124 hrdlkpqnllin~ngelkladfglarafgipvrc--------------------------------y------------- 158 (292)
T KOG0662|consen 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRC--------------------------------Y------------- 158 (292)
T ss_pred hccCCcceEEeccCCcEEecccchhhhcCCceEe--------------------------------e-------------
Confidence 9999999999999999999999999877655211 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
...+-|.||++|.++.|.. |+++.|+||.||++.
T Consensus 159 ---------------------------------------------saevvtlwyrppdvlfgakly~tsidmwsagcifa 193 (292)
T KOG0662|consen 159 ---------------------------------------------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193 (292)
T ss_pred ---------------------------------------------eceeeeeeccCcceeeeeehhccchHhhhcchHHH
Confidence 0024599999999999988 999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc----------------------CCCch--hhhcCc----hhHHHHHHcCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR----------------------VLPPQ--LLLKFP----KEASFCLWLLHPEPSG 312 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~----------------------~~~~~--~~~~~~----~~~~li~~~L~~dP~~ 312 (712)
||.. |.+++.+.......+-.. .+|.. +....| .-.++++++|.-+|.+
T Consensus 194 elanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~q 273 (292)
T KOG0662|consen 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQ 273 (292)
T ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCccc
Confidence 9987 777665544444332210 01110 111112 2348999999999999
Q ss_pred CCCHHHHhcCcCCCCCc
Q 005147 313 RPKMGELLQSEFLNEPR 329 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~ 329 (712)
|++++++|+||||....
T Consensus 274 risaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 274 RISAEAALQHPYFSDFS 290 (292)
T ss_pred ccCHHHHhcCccccccC
Confidence 99999999999998753
No 120
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=1.8e-28 Score=259.16 Aligned_cols=210 Identities=14% Similarity=0.192 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+.+++ ++. ....+++++|+.+++|.+++......+++..++.++.||+.||.|||+.||+|+
T Consensus 53 ~E~~~l~~l~h~nI~~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~ 128 (301)
T cd07873 53 REVSLLKDLKHANIVTLHD-IIH---TEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHR 128 (301)
T ss_pred HHHHHHHhcCCCCcceEEE-EEe---cCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 4566788899999999888 443 234688999998889999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++........
T Consensus 129 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------- 159 (301)
T cd07873 129 DLKPQNLLINERGELKLADFGLARAKSIPTK------------------------------------------------- 159 (301)
T ss_pred CCCHHHEEECCCCcEEECcCcchhccCCCCC-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+.. ++.++|||||||++|+|
T Consensus 160 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el 198 (301)
T cd07873 160 -----------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 198 (301)
T ss_pred -----------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHH
Confidence 000034688999999987644 88999999999999999
Q ss_pred hC---CCCCChhhHHH--HHhhccc------------------CCCch-------h-hhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRT--MSSLRHR------------------VLPPQ-------L-LLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~--~~~~~~~------------------~~~~~-------~-~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||......... +...... ..+.. . ....+...+||.+||+.||.+||
T Consensus 199 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~ 278 (301)
T cd07873 199 STGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRI 278 (301)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCc
Confidence 99 45433221111 1110000 00100 0 11233455999999999999999
Q ss_pred CHHHHhcCcCCCCCcC
Q 005147 315 KMGELLQSEFLNEPRD 330 (712)
Q Consensus 315 t~~eiL~hp~~~~~~~ 330 (712)
|+.++|+||||.....
T Consensus 279 t~~eil~h~~f~~~~~ 294 (301)
T cd07873 279 SAEEAMKHPYFHCLGE 294 (301)
T ss_pred CHHHHhcCcccccccc
Confidence 9999999999987654
No 121
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.95 E-value=9.4e-29 Score=264.62 Aligned_cols=203 Identities=16% Similarity=0.242 Sum_probs=150.8
Q ss_pred eeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++..+ .||||+.+++ .+.. ...+++++|+ .|++|.+++...+ .+++.+++.|+.||+.||+|||++||+||||
T Consensus 48 ~~~~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivHrDl 122 (327)
T cd05617 48 VFEQASSNPFLVGLHS-CFQT---TSRLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHERGIIYRDL 122 (327)
T ss_pred HHHhhcCCCCEeeEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 44444 7999999877 4422 3457777777 5999999885443 4999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.+||+|||+++...... +
T Consensus 123 kp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------------ 151 (327)
T cd05617 123 KLDNVLLDADGHIKLTDYGMCKEGLGPG---------------------------------D------------------ 151 (327)
T ss_pred CHHHEEEeCCCCEEEeccccceeccCCC---------------------------------C------------------
Confidence 9999999999999999999874211000 0
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.....+|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g 192 (327)
T cd05617 152 ---------------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAG 192 (327)
T ss_pred ---------------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhC
Confidence 0011468999999999999999999999999999999998
Q ss_pred --CCCCCh------hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC------HHHHhcCcCCCCCc
Q 005147 268 --PFSTGE------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~eiL~hp~~~~~~ 329 (712)
||.... ........+..... .......+...+++.+||..||.+|++ +.++++||||....
T Consensus 193 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 193 RSPFDIITDNPDMNTEDYLFQVILEKPI-RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred CCCCCccCCCcccccHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 663211 11112222222111 111122344569999999999999998 57999999998764
No 122
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.95 E-value=1.9e-28 Score=256.94 Aligned_cols=207 Identities=15% Similarity=0.183 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..++||||+.+++ .+.. ...+++++++ .|++|.+++.. ....+++.++..++.||+.||.|||+.||+
T Consensus 49 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 124 (285)
T cd05605 49 NEKQILEKVNSRFVVSLAY-AYET---KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124 (285)
T ss_pred HHHHHHHhcCCCCEeeeee-eecC---CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 3556788999999999877 4432 2457777776 58999998843 334589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 125 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------ 156 (285)
T cd05605 125 YRDLKPENILLDDYGHIRISDLGLAVEIPEGE------------------------------------------------ 156 (285)
T ss_pred ecCCCHHHEEECCCCCEEEeeCCCceecCCCC------------------------------------------------
Confidence 99999999999999999999999874321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+..++.++||||+||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~e 193 (285)
T cd05605 157 -------------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYE 193 (285)
T ss_pred -------------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHH
Confidence 0001357899999999998889999999999999999
Q ss_pred hhC---CCCCChhhH---HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||....... .....+... .+.......+...+|+.+||..||.+|| ++.++++||||....
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 194 MIEGKSPFRQRKEKVKREEVERRVKED-QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred HHHCCCCCCCCchhhHHHHHHHHhhhc-ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 998 665433221 111222211 1111112234456999999999999999 899999999998753
No 123
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-29 Score=243.21 Aligned_cols=204 Identities=17% Similarity=0.210 Sum_probs=164.1
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNV 108 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDL 108 (712)
+++...+-|-||+.|+ +|. ....+.|.||+.+..+..+|+.-.+.+++..+-++...++.||.||.. +||+|||+
T Consensus 143 vv~~s~dcpyIV~c~G-yFi---~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDv 218 (391)
T KOG0983|consen 143 VVLKSHDCPYIVQCFG-YFI---TNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDV 218 (391)
T ss_pred HHhhccCCCeeeeeee-EEe---eCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeeccc
Confidence 3456677899999998 332 223467788888888888887767779999999999999999999997 59999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+|||++..|+||+||||++...-...
T Consensus 219 KPSNILlDe~GniKlCDFGIsGrlvdSk---------------------------------------------------- 246 (391)
T KOG0983|consen 219 KPSNILLDERGNIKLCDFGISGRLVDSK---------------------------------------------------- 246 (391)
T ss_pred CccceEEccCCCEEeecccccceeeccc----------------------------------------------------
Confidence 9999999999999999999983321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHHHHHHh
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvll~eL 265 (712)
..+...|.+.|||||.+-- ..|+.++||||||++++||
T Consensus 247 ---------------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveL 287 (391)
T KOG0983|consen 247 ---------------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVEL 287 (391)
T ss_pred ---------------------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhh
Confidence 0112468999999999843 3499999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhh---hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.| ||......+..+..+..... |.+. ...+...+|+..||..|+.+||...++|+|||+....
T Consensus 288 aTg~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 288 ATGQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred hcccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence 99 88777777777777776444 3332 2457777999999999999999999999999998763
No 124
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95 E-value=1.6e-28 Score=265.71 Aligned_cols=205 Identities=21% Similarity=0.211 Sum_probs=150.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++|+||+++++ ++.. ...+++++|| .+++|.... ..++..+..|++||+.||+|||++||+|
T Consensus 121 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH 191 (353)
T PLN00034 121 REIEILRDVNHPNVVKCHD-MFDH---NGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIVH 191 (353)
T ss_pred HHHHHHHhCCCCCcceeee-Eecc---CCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4556788899999999887 5532 3356677776 588886532 2567788899999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++...... .
T Consensus 192 rDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~----------------------------------------------- 223 (353)
T PLN00034 192 RDIKPSNLLINSAKNVKIADFGVSRILAQTM-D----------------------------------------------- 223 (353)
T ss_pred cCCCHHHEEEcCCCCEEEcccccceeccccc-c-----------------------------------------------
Confidence 9999999999999999999999874321100 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 260 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGv 260 (712)
......|+..|+|||.+.. ...+.++|||||||
T Consensus 224 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGv 261 (353)
T PLN00034 224 ------------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGV 261 (353)
T ss_pred ------------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHHHH
Confidence 0001468999999998843 22467999999999
Q ss_pred HHHHhhC---CCCCCh--hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|||++ ||.... .....+..+.....+.......+...+||.+||..||++|||+.|+|+||||.....
T Consensus 262 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 262 SILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 9999998 554221 112222222222222222233455669999999999999999999999999998643
No 125
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=1.4e-28 Score=263.94 Aligned_cols=206 Identities=17% Similarity=0.166 Sum_probs=153.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-Cce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIv 104 (712)
++..+|..++||||+.+++ ++.+ ...+++++|| .|++|.+++...+ .+++..+..++.||+.||.|||+. +|+
T Consensus 52 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~iv 126 (333)
T cd06650 52 RELQVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIM 126 (333)
T ss_pred HHHHHHHHCCCCcccceeE-EEEE---CCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 4556788899999999888 4432 3457777777 5899999995543 489999999999999999999985 799
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.+|++|||++......
T Consensus 127 H~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------------------------------------------------- 157 (333)
T cd06650 127 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------- 157 (333)
T ss_pred ecCCChhhEEEcCCCCEEEeeCCcchhhhhh-------------------------------------------------
Confidence 9999999999999999999999987322100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~ 194 (333)
T cd06650 158 -------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 194 (333)
T ss_pred -------------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence 0001357899999999988889999999999999999
Q ss_pred hhC---CCCCChhhHHH--HH-----------------------------------------hhcccCCCchhhh-cCch
Q 005147 265 LFC---PFSTGEEKTRT--MS-----------------------------------------SLRHRVLPPQLLL-KFPK 297 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~--~~-----------------------------------------~~~~~~~~~~~~~-~~~~ 297 (712)
|++ ||......... +. .+.....+..... ...+
T Consensus 195 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (333)
T cd06650 195 MAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAE 274 (333)
T ss_pred HHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHH
Confidence 998 55432211100 00 0000000000011 1234
Q ss_pred hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 298 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
..+|+.+||+.||++|||+.++++||||+...
T Consensus 275 ~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 275 FQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred HHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 45999999999999999999999999998653
No 126
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.95 E-value=7.7e-29 Score=268.95 Aligned_cols=239 Identities=15% Similarity=0.211 Sum_probs=158.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+++++ .+. ....++++||+ .|++|.+++.+.+ .+++..++.++.||+.||+|||++||+||
T Consensus 51 e~~~l~~l~~~~iv~~~~-~~~---~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~givHr 125 (360)
T cd05627 51 ERDILVEADGAWVVKMFY-SFQ---DKRNLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQLGFIHR 125 (360)
T ss_pred HHHHHHhCCCCCEeeEEE-EEE---cCCEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 444678899999999887 442 23467777777 5899999995543 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++............ .. . ... ...++.+.....
T Consensus 126 DLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~-~~-----~-~~~------------~~~~~~~~~~~~-------- 178 (360)
T cd05627 126 DIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY-RN-----L-THN------------PPSDFSFQNMNS-------- 178 (360)
T ss_pred CCCHHHEEECCCCCEEEeeccCCcccccccccccc-cc-----c-ccC------------Cccccccccccc--------
Confidence 99999999999999999999998654322100000 00 0 000 000000000000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
....+.............+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 179 ----------------------------~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 179 ----------------------------KRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230 (360)
T ss_pred ----------------------------ccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecc
Confidence 0000000000000112257999999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhccc----CCCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~~ 329 (712)
+ ||...... .....+... .+|+. ....+...+||.+|+ .+|.+|+ ++.++++||||....
T Consensus 231 tG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 300 (360)
T cd05627 231 IGYPPFCSETPQ-ETYRKVMNWKETLVFPPE-VPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVD 300 (360)
T ss_pred cCCCCCCCCCHH-HHHHHHHcCCCceecCCC-CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCC
Confidence 9 66544332 222222221 12221 123345568999877 4999998 589999999999863
No 127
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.95 E-value=3.6e-28 Score=254.23 Aligned_cols=209 Identities=13% Similarity=0.158 Sum_probs=153.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++.+++ .+.. ...+++++|+ .+++|..++.+....+++..++.++.||+.||.|||+.||+||
T Consensus 52 e~~~l~~l~h~~ii~~~~-~~~~---~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~ 127 (282)
T cd06643 52 EIDILASCDHPNIVKLLD-AFYY---ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHR 127 (282)
T ss_pred HHHHHHHCCCCCeeeEEE-EEee---CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 445788899999999888 4422 2345666666 6889998885545568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++........
T Consensus 128 dlkp~nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------- 158 (282)
T cd06643 128 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQ------------------------------------------------- 158 (282)
T ss_pred CCCcccEEEccCCCEEEcccccccccccccc-------------------------------------------------
Confidence 9999999999999999999998743211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvl 261 (712)
......++..|+|||.+. +..++.++|||||||+
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi 197 (282)
T cd06643 159 -----------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 197 (282)
T ss_pred -----------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHH
Confidence 000135788999999983 3447889999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|||++ ||.........................+ ....+|+.+||+.+|.+||++.++++||||.....
T Consensus 198 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 198 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred HHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence 999998 5554433322222222111111111222 34569999999999999999999999999986543
No 128
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95 E-value=2.8e-28 Score=261.41 Aligned_cols=207 Identities=17% Similarity=0.250 Sum_probs=152.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|+||+.+++ ++.. ...+++++|+ .|++|.+++.+....+++.+++.++.||+.||+|||++||+||
T Consensus 51 e~~~l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 126 (331)
T cd05597 51 ERDVLVNGDRRWITNLHY-AFQD---ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHR 126 (331)
T ss_pred HHHHHHhCCCCCCCceEE-EEec---CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEC
Confidence 344677789999999887 5532 3457777776 6999999996655569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.++|+|||++........
T Consensus 127 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 157 (331)
T cd05597 127 DIKPDNVLLDKNGHIRLADFGSCLRLLADGT------------------------------------------------- 157 (331)
T ss_pred CCCHHHEEECCCCCEEEEECCceeecCCCCC-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvl 261 (712)
......+|++.|+|||++.. ..++.++|||||||+
T Consensus 158 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~ 197 (331)
T cd05597 158 ----------------------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVC 197 (331)
T ss_pred ----------------------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhH
Confidence 00011368999999999863 347889999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcc----cCCCchhhhcCchhHHHHHHcCCCCCC--CCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPS--GRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~--~Rpt~~eiL~hp~~~~~ 328 (712)
+|+|++ ||...... ..+..+.. ...++......+...+|+.+||..+++ .|+++.++++||||...
T Consensus 198 l~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 198 MYEMLYGETPFYAESLV-ETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 999999 66544322 22222221 112222222344556999998865444 37899999999999875
No 129
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.95 E-value=3.4e-28 Score=251.89 Aligned_cols=210 Identities=16% Similarity=0.179 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++|+|++++++ ++.+ ...+++++|+ .|++|.+++.+.. .+++..+..++.||+.||+|||+.||+|
T Consensus 51 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 125 (265)
T cd06631 51 EEVDLLKSLKHVNIVQYLG-TCLD---DNTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNCVVH 125 (265)
T ss_pred HHHHHHHhcCCCCEeeEee-Eeec---CCeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 3455788999999999888 4432 2466777776 6999999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+......... ... +
T Consensus 126 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~~------------~- 162 (265)
T cd06631 126 RDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH------------------------------GTH------------S- 162 (265)
T ss_pred CCcCHHhEEECCCCeEEeccchhhHhhhhcccc------------------------------ccc------------c-
Confidence 999999999999999999999987433211000 000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ......|+..|+|||.+.+..++.++|+|||||++|+|
T Consensus 163 ---------------------------------~--------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l 201 (265)
T cd06631 163 ---------------------------------N--------MLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEM 201 (265)
T ss_pred ---------------------------------c--------cccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHH
Confidence 0 00013578999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...+........... ...+...........+++.+||..+|.+||++.++++||||
T Consensus 202 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 202 ATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99 56544333222222222 22222222223445599999999999999999999999997
No 130
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=2.5e-28 Score=255.62 Aligned_cols=205 Identities=17% Similarity=0.222 Sum_probs=151.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC--CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~--~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..++..++|||++++++ ++. ....+++++++..++|.+++.. .+..+++.+++.++.||+.||.|||++||+
T Consensus 48 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 123 (285)
T cd07861 48 REISLLKELQHPNIVCLQD-VLM---QESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVL 123 (285)
T ss_pred HHHHHHHhcCCCCEeeeEE-EEe---eCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3556788899999999888 443 2346788888877899998843 235589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++...+....
T Consensus 124 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 156 (285)
T cd07861 124 HRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR----------------------------------------------- 156 (285)
T ss_pred ecCCCHHHEEEcCCCcEEECcccceeecCCCcc-----------------------------------------------
Confidence 999999999999999999999998843221100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
......+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 193 (285)
T cd07861 157 -------------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFA 193 (285)
T ss_pred -------------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHH
Confidence 000135688999999887654 789999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc-------------------CCC--------chhhhcCchhHHHHHHcCCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR-------------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~-------------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|++ ||............+... ..+ .......++..++|.+||..||.+|
T Consensus 194 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 273 (285)
T cd07861 194 EMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKR 273 (285)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhC
Confidence 9999 454333222221111100 000 0011123445589999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
||+.+++.||||
T Consensus 274 pt~~~ll~~~~~ 285 (285)
T cd07861 274 ISAKKALNHPYF 285 (285)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
No 131
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.95 E-value=3.7e-28 Score=252.46 Aligned_cols=205 Identities=17% Similarity=0.209 Sum_probs=148.9
Q ss_pred eeeccC-CCCCcccccccccccccc--cCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 30 VELTHG-DHLRNQGGLSGVCENEAA--IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~~~--~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+ +|+|++++++.+...... ...+++++|+ .+++|.+++.. ....+++..++.++.||+.||+|||++||+
T Consensus 54 ~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~iv 133 (272)
T cd06637 54 NMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVI 133 (272)
T ss_pred HHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 345555 799999988843322221 2356777777 57899999854 334589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++....... .
T Consensus 134 h~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~-~---------------------------------------------- 166 (272)
T cd06637 134 HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-G---------------------------------------------- 166 (272)
T ss_pred cCCCCHHHEEECCCCCEEEccCCCceeccccc-c----------------------------------------------
Confidence 99999999999999999999999874321100 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLG 259 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlG 259 (712)
......|+..|+|||++. +..++.++||||||
T Consensus 167 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 203 (272)
T cd06637 167 -------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 203 (272)
T ss_pred -------------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHH
Confidence 001145788999999986 33588899999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++|||++ ||................ .+...... .....+|+.+||..+|.+|||+.+++.||||
T Consensus 204 v~l~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 204 ITAIEMAEGAPPLCDMHPMRALFLIPRNP-APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHHhCCCCccccCHHHHHHHHhcCC-CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 99999999 454333222222211111 11111112 2345599999999999999999999999997
No 132
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.95 E-value=4.2e-28 Score=251.37 Aligned_cols=209 Identities=16% Similarity=0.204 Sum_probs=155.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .+++|.+++... ..+++..+..++.||+.||+|||++|++|
T Consensus 55 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH 129 (267)
T cd06628 55 REIALLKELQHENIVQYLG-SSLD---ADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIH 129 (267)
T ss_pred HHHHHHHhcCCCCeeeEEE-EEEe---CCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 4456788899999999888 3322 2355666666 688999999554 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||+|+||+++.++.++++|||.++.......... .
T Consensus 130 ~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------~-------------- 165 (267)
T cd06628 130 RDIKGANILVDNKGGIKISDFGISKKLEANSLSTK------------------------------T-------------- 165 (267)
T ss_pred ccCCHHHEEEcCCCCEEecccCCCcccccccccCC------------------------------c--------------
Confidence 99999999999999999999998854321100000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 166 ----------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l 205 (267)
T cd06628 166 ----------------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEM 205 (267)
T ss_pred ----------------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHH
Confidence 0000013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...... .....+.....+...........+++.+||+.+|.+||++.++++||||
T Consensus 206 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 206 LTGKHPFPDCTQL-QAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred hhCCCCCCCccHH-HHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 98 66543332 2223333333333222233455599999999999999999999999997
No 133
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=2.2e-28 Score=262.59 Aligned_cols=219 Identities=16% Similarity=0.201 Sum_probs=159.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+|..++||||+++++.+.........+++++++.+++|.+++.... .+++.++..++.||+.||.|||++||+||
T Consensus 53 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 131 (334)
T cd07855 53 RELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSANVIHR 131 (334)
T ss_pred HHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 45667889999999998873322233445688999998889999995544 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.........
T Consensus 132 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------------ 163 (334)
T cd07855 132 DLKPSNLLVNEDCELRIGDFGMARGLSSSPTE------------------------------------------------ 163 (334)
T ss_pred CCCHHHEEEcCCCcEEecccccceeecccCcC------------------------------------------------
Confidence 99999999999999999999987432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
.........|+.+|+|||.+.+ ..++.++|||||||++|||
T Consensus 164 --------------------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el 205 (334)
T cd07855 164 --------------------------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEM 205 (334)
T ss_pred --------------------------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHH
Confidence 0000011467899999999866 4589999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc--cC--------------------CC---ch-----hhhcCchhHHHHHHcCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH--RV--------------------LP---PQ-----LLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~--~~--------------------~~---~~-----~~~~~~~~~~li~~~L~~dP~~ 312 (712)
++ ||...... ..+..+.. +. .+ .. .....+...++|.+||+.+|.+
T Consensus 206 ~~g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 284 (334)
T cd07855 206 LGRRQLFPGKNYV-HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEE 284 (334)
T ss_pred HcCCCccCCCChH-HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhh
Confidence 98 55433221 11111000 00 00 00 1112345559999999999999
Q ss_pred CCCHHHHhcCcCCCCCcCchH
Q 005147 313 RPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
|||+.++++||||.....+..
T Consensus 285 Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 285 RITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred CcCHHHHHhChhhhhccCCcc
Confidence 999999999999987766443
No 134
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1.9e-28 Score=276.47 Aligned_cols=209 Identities=14% Similarity=0.124 Sum_probs=150.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC----CCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~----~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+|..++||||+++++ ++.. .+..++++++.+++|.+++... .......+++.|+.||+.||+|||++|
T Consensus 212 ~Ei~il~~l~HpnIv~l~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g 287 (501)
T PHA03210 212 NEILALGRLNHENILKIEE-ILRS---EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK 287 (501)
T ss_pred HHHHHHHhCCCCCcCcEeE-EEEE---CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 4566789999999999887 5533 2356777777778888887332 122345678899999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
||||||||+|||++.++.+||+|||++..+......
T Consensus 288 IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-------------------------------------------- 323 (501)
T PHA03210 288 LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA-------------------------------------------- 323 (501)
T ss_pred eecCCCCHHHEEECCCCCEEEEeCCCceecCccccc--------------------------------------------
Confidence 999999999999999999999999998543221000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+|+..|+|||++.+..++.++|||||||++
T Consensus 324 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 358 (501)
T PHA03210 324 ---------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL 358 (501)
T ss_pred ---------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHH
Confidence 00014689999999999999999999999999999
Q ss_pred HHhhC----CCCCC--hhhHHHHHhhcc-----cCCCc-----------------------hhh--hcCchhHHHHHHcC
Q 005147 263 FELFC----PFSTG--EEKTRTMSSLRH-----RVLPP-----------------------QLL--LKFPKEASFCLWLL 306 (712)
Q Consensus 263 ~eLl~----pf~~~--~~~~~~~~~~~~-----~~~~~-----------------------~~~--~~~~~~~~li~~~L 306 (712)
|||++ |+... .........+.. ..+|. .+. ....+..++|.+||
T Consensus 359 ~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL 438 (501)
T PHA03210 359 LDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKML 438 (501)
T ss_pred HHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHh
Confidence 99997 33211 111111111110 00010 000 01123347799999
Q ss_pred CCCCCCCCCHHHHhcCcCCCCC
Q 005147 307 HPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 307 ~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
.+||.+|||+.|+|+||||...
T Consensus 439 ~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 439 TFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred ccCcccCcCHHHHhhChhhhcC
Confidence 9999999999999999999765
No 135
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.95 E-value=4.4e-28 Score=253.72 Aligned_cols=207 Identities=20% Similarity=0.272 Sum_probs=152.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++|||++.+++ ++.. ...+++++++.|++|.+++......+++.+++.++.||+.||.|||+.||+|+
T Consensus 48 ~e~~~l~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 123 (286)
T cd07832 48 REIKALQACQHPYVVKLLD-VFPH---GSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHR 123 (286)
T ss_pred HHHHHHHhCCCCCCcceee-EEec---CCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 3456788899999999888 4422 34677888888999999996555669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.........
T Consensus 124 dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------ 155 (286)
T cd07832 124 DLKPANLLISADGVLKIADFGLARLFSEEEPR------------------------------------------------ 155 (286)
T ss_pred CcCHHHEEEcCCCcEEEeeeeecccccCCCCC------------------------------------------------
Confidence 99999999999999999999988433211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......|+.+|+|||.+.+.. ++.++|||||||++|||
T Consensus 156 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l 194 (286)
T cd07832 156 -----------------------------------------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAEL 194 (286)
T ss_pred -----------------------------------------ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHH
Confidence 000135789999999987654 68999999999999999
Q ss_pred hC--CCCCChhhHHHHHhhccc---------------------CCCc--------hhhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC--PFSTGEEKTRTMSSLRHR---------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~--pf~~~~~~~~~~~~~~~~---------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ |++...........+... ..+. ..........++|.+||..+|.+||
T Consensus 195 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~ 274 (286)
T cd07832 195 LNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRL 274 (286)
T ss_pred HcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCC
Confidence 99 332222211111111100 0000 0011223445999999999999999
Q ss_pred CHHHHhcCcCCC
Q 005147 315 KMGELLQSEFLN 326 (712)
Q Consensus 315 t~~eiL~hp~~~ 326 (712)
|++++|+||||.
T Consensus 275 ~~~~~l~h~~~~ 286 (286)
T cd07832 275 SAAEALRHPYFT 286 (286)
T ss_pred CHHHHhhCcCcC
Confidence 999999999984
No 136
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=5.7e-28 Score=248.51 Aligned_cols=203 Identities=19% Similarity=0.240 Sum_probs=157.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|||++++++ .+.. ...+++++|+ .|++|.+++... ...+++..+..++.||+.||.|||+.||+|
T Consensus 49 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h 124 (256)
T cd08529 49 EARVLAKLDSSYIIRYYE-SFLD---KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILH 124 (256)
T ss_pred HHHHHHhcCCCCeehhee-eecc---CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 445688899999999887 3322 2456777776 699999999543 456899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 125 ~dl~~~nili~~~~~~~l~df~~~~~~~~~~~------------------------------------------------ 156 (256)
T cd08529 125 RDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN------------------------------------------------ 156 (256)
T ss_pred CCCCcceEEEeCCCCEEEcccccceeccCccc------------------------------------------------
Confidence 99999999999999999999998743321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+++|+|||++.+..++.++|||||||++|+|
T Consensus 157 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 194 (256)
T cd08529 157 ------------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYEC 194 (256)
T ss_pred ------------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHH
Confidence 00013578899999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...... .....+.....++......+...+++.+||+.+|++||++.++++|||+
T Consensus 195 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 195 CTGKHPFDANNQG-ALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 98 66544432 3333333343433322334556699999999999999999999999986
No 137
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.95 E-value=5.5e-28 Score=248.89 Aligned_cols=205 Identities=16% Similarity=0.229 Sum_probs=155.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+|++.+++ .+. .....+++++++ .+++|.+++.. ....+++.+++.++.||+.||++||+.||+
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~--~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~ 124 (257)
T cd08223 48 QEAQLLSQLKHPNIVAYRE-SWE--GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHIL 124 (257)
T ss_pred HHHHHHHhCCCCCeeeeee-eec--CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3456788899999999777 332 122345677766 68999999954 344589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++........
T Consensus 125 H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~----------------------------------------------- 157 (257)
T cd08223 125 HRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD----------------------------------------------- 157 (257)
T ss_pred ccCCCchhEEEecCCcEEEecccceEEecccCC-----------------------------------------------
Confidence 999999999999999999999998743211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~ 194 (257)
T cd08223 158 -------------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYE 194 (257)
T ss_pred -------------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHH
Confidence 0001357889999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||...... .....+.....+.......+...+++.+||..+|.+|||+.++++||||
T Consensus 195 l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 195 MATLKHAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999 55443332 2223333333333223344556699999999999999999999999997
No 138
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95 E-value=2.6e-28 Score=265.64 Aligned_cols=205 Identities=16% Similarity=0.179 Sum_probs=152.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++||||+++++ .+. ....+++++|+ .|++|.+++... .+++..++.++.||+.||.|||++||+||
T Consensus 93 e~~i~~~~~hp~iv~~~~-~~~---~~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 166 (371)
T cd05622 93 ERDIMAFANSPWVVQLFY-AFQ---DDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHR 166 (371)
T ss_pred HHHHHHhCCCCCCCeEEE-EEE---cCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 445678899999999887 442 23457788877 589999998543 38999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.++.+||+|||++.........
T Consensus 167 DLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~------------------------------------------------ 198 (371)
T cd05622 167 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV------------------------------------------------ 198 (371)
T ss_pred CCCHHHEEECCCCCEEEEeCCceeEcCcCCcc------------------------------------------------
Confidence 99999999999999999999988432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+.. ++.++|||||||++
T Consensus 199 -----------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil 237 (371)
T cd05622 199 -----------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 237 (371)
T ss_pred -----------------------------------------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHH
Confidence 001146899999999986543 78999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~ 328 (712)
|||++ ||...... .....+...... +......+...++|.+||..++.+ |+++.++++|+||+..
T Consensus 238 yell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 238 YEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 99998 66544332 233333322211 112223345559999999844432 7899999999999874
No 139
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=3.1e-28 Score=260.63 Aligned_cols=214 Identities=18% Similarity=0.132 Sum_probs=149.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++||||+++++ ++.. ...+++++|+ .+++|.+++... ...+++..++.++.||+.||+|||++||+|
T Consensus 49 e~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH 124 (327)
T cd08227 49 ELHVSKLFNHPNIVPYRA-TFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVH 124 (327)
T ss_pred HHHHHHhcCCCCeeeEEE-EEEE---CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 445778899999999887 5532 2356677776 689999998442 334899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+++.||+....... +|....
T Consensus 125 ~dlkp~Nil~~~~~~~~l~~~~~~~~~~~------------------------------------~~~~~~--------- 159 (327)
T cd08227 125 RSVKASHILISVDGKVYLSGLRSNLSMIN------------------------------------HGQRLR--------- 159 (327)
T ss_pred CCCChhhEEEecCCcEEEcccchhhcccc------------------------------------cccccc---------
Confidence 99999999999999999999876522100 000000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--CCCCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvll~ 263 (712)
...+ + .....++..|+|||++.+ ..++.++|||||||++|
T Consensus 160 ---------------------~~~~--------------~---~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~ 201 (327)
T cd08227 160 ---------------------VVHD--------------F---PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 201 (327)
T ss_pred ---------------------cccc--------------c---cccccceecccChHHhhcccCCCCchhhHHHHHHHHH
Confidence 0000 0 001245778999999976 35899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCC--------Cc------------------------------------hhhhcCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVL--------PP------------------------------------QLLLKFP 296 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~--------~~------------------------------------~~~~~~~ 296 (712)
||++ ||.................. ++ ......+
T Consensus 202 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
T cd08227 202 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSP 281 (327)
T ss_pred HHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCH
Confidence 9998 55433222211111111000 00 0001123
Q ss_pred hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 297 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 297 ~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
...+|+.+||+.||++|||+.++|+||||+..
T Consensus 282 ~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 282 HFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred HHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 45589999999999999999999999999864
No 140
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.95 E-value=4.2e-28 Score=251.47 Aligned_cols=208 Identities=19% Similarity=0.197 Sum_probs=151.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ .+.. .....+++++++ .+++|.+++.+.. .+++..++.++.||+.||.|||++||+|
T Consensus 53 ~e~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i~H 129 (266)
T cd06651 53 CEIQLLKNLQHERIVQYYG-CLRD-RAEKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNMIVH 129 (266)
T ss_pred HHHHHHHHcCCCCeeeEEE-EEEc-CCCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 3445788999999999887 4432 223456666666 6889999995543 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++......... +.
T Consensus 130 ~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~-------------- 164 (266)
T cd06651 130 RDIKGANILRDSAGNVKLGDFGASKRLQTICMS-------------------------------GT-------------- 164 (266)
T ss_pred CCCCHHHEEECCCCCEEEccCCCcccccccccc-------------------------------CC--------------
Confidence 999999999999999999999987432110000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 165 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el 202 (266)
T cd06651 165 ------------------------------------------GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEM 202 (266)
T ss_pred ------------------------------------------ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHH
Confidence 00013468899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
++ ||.......... ........+.+... .+...+++ .||..+|++||+++++++||||+
T Consensus 203 ~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 203 LTEKPPWAEYEAMAAIF-KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHCCCCccccchHHHHH-HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 98 554433222222 22222222222222 33344677 67778999999999999999996
No 141
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95 E-value=4.3e-28 Score=259.05 Aligned_cols=202 Identities=17% Similarity=0.243 Sum_probs=151.6
Q ss_pred eeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++... .|++|+.+++ ++. ..+.+++++|+ .|++|.+++.... .+++.+++.++.||+.||+|||++||+||||
T Consensus 53 ~l~~~~~~~~i~~~~~-~~~---~~~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl 127 (323)
T cd05616 53 VLALSGKPPFLTQLHS-CFQ---TMDRLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127 (323)
T ss_pred HHHhccCCCeEeeEEE-EEe---cCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEecCC
Confidence 34444 5777777666 442 23457777777 6899999985543 4899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+|||++.++.+||+|||+++.......
T Consensus 128 kp~Nill~~~~~~kL~DfG~~~~~~~~~~--------------------------------------------------- 156 (323)
T cd05616 128 KLDNVMLDSEGHIKIADFGMCKENMWDGV--------------------------------------------------- 156 (323)
T ss_pred CHHHeEECCCCcEEEccCCCceecCCCCC---------------------------------------------------
Confidence 99999999999999999998843211100
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 197 (323)
T cd05616 157 ---------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 197 (323)
T ss_pred ---------------------------------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhC
Confidence 0011468999999999999999999999999999999999
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
||...... .....+...... ......+...+++.+||+.+|.+|++ ..++++||||....
T Consensus 198 ~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 198 QAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred CCCCCCCCHH-HHHHHHHhCCCC-CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 66544332 333333322211 11123455669999999999999997 48999999998653
No 142
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.95 E-value=1e-27 Score=252.16 Aligned_cols=211 Identities=16% Similarity=0.181 Sum_probs=155.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...++.++|+|++.+++ .+.. ...+++++++ .|++|..++.+....+++..++.++.||+.+|.|||++||+||
T Consensus 59 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 134 (292)
T cd06644 59 EIEILATCNHPYIVKLLG-AFYW---DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHR 134 (292)
T ss_pred HHHHHHhCCCCcEeeeEE-EEEe---CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 445688899999999888 3322 2356677776 6888988875555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++|+|||.+.......
T Consensus 135 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 164 (292)
T cd06644 135 DLKAGNVLLTLDGDIKLADFGVSAKNVKTL-------------------------------------------------- 164 (292)
T ss_pred CCCcceEEEcCCCCEEEccCccceeccccc--------------------------------------------------
Confidence 999999999999999999999873221100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvl 261 (712)
.......+++.|+|||.+. ...++.++|||||||+
T Consensus 165 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i 204 (292)
T cd06644 165 ----------------------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT 204 (292)
T ss_pred ----------------------------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHH
Confidence 0001135788999999985 3447889999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCc-h-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchH
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPP-Q-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
+|||++ ||...... .....+.....+. . .........+++.+||..+|.+||++.++++||||........
T Consensus 205 l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~ 280 (292)
T cd06644 205 LIEMAQIEPPHHELNPM-RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRP 280 (292)
T ss_pred HHHHhcCCCCCccccHH-HHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccchh
Confidence 999999 44433322 2222222222221 1 1122345569999999999999999999999999987655433
No 143
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=8.6e-28 Score=250.98 Aligned_cols=203 Identities=18% Similarity=0.271 Sum_probs=148.6
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...+..+ +|+|++++++ ++.+. ....+++++|+.+++|.+++......+++.+++.++.||+.||.|||+.||+||
T Consensus 47 e~~~l~~l~~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~ 124 (282)
T cd07831 47 EIQALRRLSPHPNILRLIE-VLFDR-KTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHR 124 (282)
T ss_pred HHHHHhhcCCCCCccceEE-EEecC-CCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 44455665 5999999888 44333 224678888888789999886544568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++. +.++++|||.+....... .
T Consensus 125 dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~---------------------------------~---------------- 154 (282)
T cd07831 125 DIKPENILIKD-DILKLADFGSCRGIYSKP---------------------------------P---------------- 154 (282)
T ss_pred ccCHHHEEEcC-CCeEEEecccccccccCC---------------------------------C----------------
Confidence 99999999999 999999999884321110 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
.....++.+|+|||.+.. ..++.++|||||||++|||
T Consensus 155 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el 192 (282)
T cd07831 155 ------------------------------------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEI 192 (282)
T ss_pred ------------------------------------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHH
Confidence 001346889999998754 4478999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc---c-----------------CCCch--------hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH---R-----------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~---~-----------------~~~~~--------~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||....... ....+.. . ..+.. .........++|.+||.++|++||
T Consensus 193 ~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 271 (282)
T cd07831 193 LSLFPLFPGTNELD-QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERI 271 (282)
T ss_pred HcCCcCCCCCCHHH-HHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCccccc
Confidence 98 554332211 1111100 0 00100 011224455999999999999999
Q ss_pred CHHHHhcCcCC
Q 005147 315 KMGELLQSEFL 325 (712)
Q Consensus 315 t~~eiL~hp~~ 325 (712)
|+.++++||||
T Consensus 272 ~~~~~l~~~~~ 282 (282)
T cd07831 272 TAKQALRHPYF 282 (282)
T ss_pred CHHHHhhCCCC
Confidence 99999999997
No 144
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.95 E-value=3.5e-28 Score=254.98 Aligned_cols=206 Identities=16% Similarity=0.199 Sum_probs=154.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|+|++.+++ .+.+ ...+++++++ .|++|.+++.. ....+++.+++.++.||+.||.|||+.||+|
T Consensus 50 E~~il~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH 125 (285)
T cd05630 50 EKQILEKVNSRFVVSLAY-AYET---KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVY 125 (285)
T ss_pred HHHHHHhCCCCCeeeeeE-EEec---CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 456788999999999877 4422 2356777776 68999998833 3345899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++..+.++++|||++.......
T Consensus 126 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------- 156 (285)
T cd05630 126 RDLKPENILLDDHGHIRISDLGLAVHVPEGQ------------------------------------------------- 156 (285)
T ss_pred CCCCHHHEEECCCCCEEEeeccceeecCCCc-------------------------------------------------
Confidence 9999999999999999999999873221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 157 ------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l 194 (285)
T cd05630 157 ------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 194 (285)
T ss_pred ------------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHH
Confidence 00013579999999999988899999999999999999
Q ss_pred hC---CCCCChhh--HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
++ ||...... ....................+...+|+.+||+.||.+||| +.++++||||+..
T Consensus 195 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 195 IAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 98 66543211 1111111111111111122344569999999999999999 8999999999874
No 145
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=2.7e-28 Score=283.33 Aligned_cols=206 Identities=17% Similarity=0.191 Sum_probs=152.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc-
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ- 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~- 101 (712)
.+..+|..+.||||+.+++.++ + .....++++||| .+++|.++|.. ....+++..++.|+.||+.||+|||+.
T Consensus 61 ~EI~IL~~L~HPNIVrl~d~f~-d-e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g 138 (1021)
T PTZ00266 61 IEVNVMRELKHKNIVRYIDRFL-N-KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLK 138 (1021)
T ss_pred HHHHHHHHcCCCCcCeEEEEEE-e-cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 3556788999999999988333 2 233467788887 58999999843 234589999999999999999999984
Q ss_pred ------CceeccCCCCceeecCC-----------------CcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 102 ------GIVVHNVRPSCFVMSSF-----------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 102 ------gIvHrDLkP~NIll~~~-----------------~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
+||||||||+||||+.. +.+||+|||++...+...
T Consensus 139 ~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---------------------- 196 (1021)
T PTZ00266 139 DGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---------------------- 196 (1021)
T ss_pred cccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc----------------------
Confidence 49999999999999642 236777776663221110
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
......||+.|
T Consensus 197 ---------------------------------------------------------------------~~~s~vGTp~Y 207 (1021)
T PTZ00266 197 ---------------------------------------------------------------------MAHSCVGTPYY 207 (1021)
T ss_pred ---------------------------------------------------------------------cccccCCCccc
Confidence 00014689999
Q ss_pred cCcccccCC--CCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCC
Q 005147 239 ASPEELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 239 ~aPE~~~~~--~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|||++.+. .++.++|||||||+||||++ ||.........+..+..... .......+...+||..||..+|.+|
T Consensus 208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeR 286 (1021)
T PTZ00266 208 WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKER 286 (1021)
T ss_pred cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHC
Confidence 999998653 48999999999999999999 66654444444444433221 1122234556699999999999999
Q ss_pred CCHHHHhcCcCCC
Q 005147 314 PKMGELLQSEFLN 326 (712)
Q Consensus 314 pt~~eiL~hp~~~ 326 (712)
|++.++|+|+||.
T Consensus 287 PSa~QlL~h~~ik 299 (1021)
T PTZ00266 287 PSALQCLGYQIIK 299 (1021)
T ss_pred cCHHHHhccHHHh
Confidence 9999999999996
No 146
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95 E-value=3.9e-28 Score=260.44 Aligned_cols=206 Identities=17% Similarity=0.223 Sum_probs=153.4
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..++..++|+||+.+++ .+. ....+++++|| .|++|.+++.+....+++..++.|+.||+.||+|||++||+|||
T Consensus 52 ~~~l~~~~~~~i~~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrD 127 (332)
T cd05623 52 RDVLVNGDNQWITTLHY-AFQ---DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRD 127 (332)
T ss_pred HHHHhhCCCCCEeeEEE-EEe---cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 34677789999999877 443 23467777776 69999999966555689999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.++++|||++........
T Consensus 128 lkp~Nili~~~~~~kL~DfG~a~~~~~~~~-------------------------------------------------- 157 (332)
T cd05623 128 IKPDNILMDMNGHIRLADFGSCLKLMEDGT-------------------------------------------------- 157 (332)
T ss_pred CCHHHEEECCCCCEEEeecchheecccCCc--------------------------------------------------
Confidence 999999999999999999998743211000
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHHH
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvll 262 (712)
......+||+.|+|||++. ...++.++|||||||++
T Consensus 158 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil 198 (332)
T cd05623 158 ---------------------------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCM 198 (332)
T ss_pred ---------------------------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHH
Confidence 0001146899999999986 34589999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhccc----CCCchhhhcCchhHHHHHHcCCCCCC--CCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPS--GRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~--~Rpt~~eiL~hp~~~~~ 328 (712)
|||++ ||...... ..+..+... .+|.......+...+|+.+||..+|. .|+++.++++||||...
T Consensus 199 ~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 199 YEMLYGETPFYAESLV-ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 99999 66544332 233333221 12332233345566999999966554 36899999999999875
No 147
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.95 E-value=9.9e-28 Score=255.30 Aligned_cols=239 Identities=16% Similarity=0.187 Sum_probs=161.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|..++|+||+++++ .+.. ...+++++|+ .|++|.+++.. .+..+++..++.++.||+.||+|||+.||+
T Consensus 50 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 125 (316)
T cd05574 50 TEQEILATLDHPFLPTLYA-SFQT---ETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125 (316)
T ss_pred HHHHHHHhCCCCCchhhee-eeec---CCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4556788999999999887 4422 3456777776 68999999954 345689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++.......... .. . ...+... ..
T Consensus 126 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~---~~---~--------------------~~~~~~~-------~~ 172 (316)
T cd05574 126 YRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV---SK---A--------------------LRKGSRR-------SS 172 (316)
T ss_pred ccCCChHHeEEcCCCCEEEeecchhhccccccccc---cc---c--------------------ccccccc-------cc
Confidence 99999999999999999999999985432210000 00 0 0000000 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
... .. ..... . .........+|+..|+|||.+.+..++.++|||||||++|+
T Consensus 173 ~~~-----~~----------~~~~~---------~----~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~ 224 (316)
T cd05574 173 VNS-----IP----------SETFS---------E----EPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYE 224 (316)
T ss_pred ccc-----cc----------hhhhc---------c----cccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 000 00 00000 0 00001122578999999999998889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC----HHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~eiL~hp~~~~~~~ 330 (712)
|++ ||...................+......+...+++.+||..+|++||| ++++|+||||+....
T Consensus 225 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 225 MLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 999 555443332222222222111111113445569999999999999999 999999999987643
No 148
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.95 E-value=9.7e-28 Score=254.58 Aligned_cols=212 Identities=18% Similarity=0.223 Sum_probs=157.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++|+|++++++ ++.. .....+++++|+.+++|.+++......+++.+++.++.||+.||.|||+.||+||
T Consensus 55 ~E~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 132 (309)
T cd07845 55 REITLLLNLRHPNIVELKE-VVVG-KHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHR 132 (309)
T ss_pred HHHHHHHhCCCCCCcceEE-EEec-CCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 4556788899999999887 3322 2334578889998889999986555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+...+....
T Consensus 133 dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------- 163 (309)
T cd07845 133 DLKVSNLLLTDKGCLKIADFGLARTYGLPAK------------------------------------------------- 163 (309)
T ss_pred CCCHHHEEECCCCCEEECccceeeecCCccC-------------------------------------------------
Confidence 9999999999999999999998854321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+. .++.++|||||||++|||
T Consensus 164 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el 202 (309)
T cd07845 164 -----------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAEL 202 (309)
T ss_pred -----------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHH
Confidence 00002357889999998764 489999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhccc---------------------CCCch--------hhhcCchhHHHHHHcCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHR---------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~---------------------~~~~~--------~~~~~~~~~~li~~~L~~dP~~R 313 (712)
++ ||...... .....+... ..+.. +....+...+||.+||+.||++|
T Consensus 203 ~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R 281 (309)
T cd07845 203 LAHKPLLPGKSEI-EQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKR 281 (309)
T ss_pred HhCCCCCCCCCHH-HHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhC
Confidence 99 45433322 111111110 00000 01123445589999999999999
Q ss_pred CCHHHHhcCcCCCCCcCc
Q 005147 314 PKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~~ 331 (712)
||+.++|+||||.....+
T Consensus 282 ~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 282 ATAEEALESSYFKEKPLP 299 (309)
T ss_pred cCHHHHhcChhhccCCCC
Confidence 999999999999866543
No 149
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.95 E-value=8.3e-28 Score=247.27 Aligned_cols=202 Identities=16% Similarity=0.178 Sum_probs=152.2
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..+++.++|+|++++++ .+.. ...+++++++ .+++|.+++......+++..++.++.||+.||.|||+.||+|+|
T Consensus 49 ~~~~~~l~~~~i~~~~~-~~~~---~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~d 124 (256)
T cd06612 49 ISILKQCDSPYIVKYYG-SYFK---NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRD 124 (256)
T ss_pred HHHHHhCCCCcEeeeee-eeec---CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 34577789999999888 3322 2456777776 68999999966566789999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||++........
T Consensus 125 l~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 154 (256)
T cd06612 125 IKAGNILLNEEGQAKLADFGVSGQLTDTMA-------------------------------------------------- 154 (256)
T ss_pred CCcceEEECCCCcEEEcccccchhcccCcc--------------------------------------------------
Confidence 999999999999999999998743211100
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 155 ----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~ 194 (256)
T cd06612 155 ----------------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAE 194 (256)
T ss_pred ----------------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHh
Confidence 0001346888999999988889999999999999999999
Q ss_pred ---CCCCChhhHHHHHhhcccCCCc-hhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPP-QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||....... .+........+. ... .......+++.+||+.+|.+|||+.++|+||||
T Consensus 195 g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 195 GKPPYSDIHPMR-AIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CCCCCCCcchhh-hhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 554332222 121211111111 111 122345699999999999999999999999997
No 150
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.95 E-value=5.7e-28 Score=252.56 Aligned_cols=200 Identities=18% Similarity=0.216 Sum_probs=148.0
Q ss_pred eccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
+...+|||++.+++ .+.. .+.+++++|+ .|++|.+++...+ .+++..+..|+.||+.||+|||++||+||||||
T Consensus 51 ~~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp 125 (279)
T cd05633 51 VSTGDCPFIVCMTY-AFHT---PDKLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKP 125 (279)
T ss_pred HhhCCCCcEeEEEE-EEec---CCeEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCH
Confidence 44568999998776 3322 2345666666 6899999985544 489999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+||+++.++.++++|||++...+...
T Consensus 126 ~Nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------------------ 151 (279)
T cd05633 126 ANILLDEHGHVRISDLGLACDFSKKK------------------------------------------------------ 151 (279)
T ss_pred HHEEECCCCCEEEccCCcceeccccC------------------------------------------------------
Confidence 99999999999999999874321100
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHhhC--
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eLl~-- 267 (712)
.....|+..|+|||.+.+ ..++.++||||+||++|+|++
T Consensus 152 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 193 (279)
T cd05633 152 --------------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGH 193 (279)
T ss_pred --------------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 000357899999999864 558999999999999999999
Q ss_pred -CCCCChhhH-HHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 268 -PFSTGEEKT-RTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 268 -pf~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
||....... ....... ...+..++ ...+...+++.+||..||.+|| |++++++||||+...
T Consensus 194 ~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 194 SPFRQHKTKDKHEIDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCcCCCCCcCHHHHHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 554322111 1111111 11112222 2334556999999999999999 699999999999854
No 151
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=6.1e-28 Score=250.26 Aligned_cols=203 Identities=18% Similarity=0.230 Sum_probs=150.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..++|||++++++ .+. ....+++++|+ .+++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 55 ~e~~~~~~l~h~~ii~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H 129 (267)
T cd06645 55 QEIIMMKDCKHSNIVAYFG-SYL---RRDKLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKMH 129 (267)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEE---eCCEEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3556788899999999888 332 22456677777 5889999985544 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 130 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 161 (267)
T cd06645 130 RDIKGANILLTDNGHVKLADFGVSAQITATIA------------------------------------------------ 161 (267)
T ss_pred CCCCHHHEEECCCCCEEECcceeeeEccCccc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll 262 (712)
......|+..|+|||.+. ...++.++|||||||++
T Consensus 162 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il 199 (267)
T cd06645 162 ------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITA 199 (267)
T ss_pred ------------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHH
Confidence 000145789999999874 44588999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhh---hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
|+|++ ||..................++... .......+++.+||..+|++|||+.++++|||
T Consensus 200 ~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 200 IELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 99998 5544332222222222222222211 11234558999999999999999999999998
No 152
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.95 E-value=1.3e-27 Score=250.17 Aligned_cols=205 Identities=18% Similarity=0.244 Sum_probs=152.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||++++++ ++. ....+++++|+.+++|.+++.. ....+++..++.++.||+.||+|||+.|++|
T Consensus 48 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H 123 (284)
T cd07860 48 REISLLKELNHPNIVKLLD-VIH---TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLH 123 (284)
T ss_pred HHHHHHHhcCCCCCcchhh-hcc---cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4556788999999999888 442 3346788888877899998843 3455899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++...+....
T Consensus 124 ~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 155 (284)
T cd07860 124 RDLKPQNLLINTEGAIKLADFGLARAFGVPVR------------------------------------------------ 155 (284)
T ss_pred CCCCHHHEEECCCCCEEEeeccchhhcccCcc------------------------------------------------
Confidence 99999999999999999999998743321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
......++.+|+|||.+.+.. ++.++|||||||++|+
T Consensus 156 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~ 193 (284)
T cd07860 156 ------------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 193 (284)
T ss_pred ------------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHH
Confidence 000124678999999987655 6889999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCC-----------------------ch----hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLP-----------------------PQ----LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~-----------------------~~----~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
|++ ||....+.............+ .. .....+...++|.+||+.||.+||
T Consensus 194 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 273 (284)
T cd07860 194 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI 273 (284)
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCC
Confidence 999 555443322222211110000 00 011223445899999999999999
Q ss_pred CHHHHhcCcCC
Q 005147 315 KMGELLQSEFL 325 (712)
Q Consensus 315 t~~eiL~hp~~ 325 (712)
|+.++++||||
T Consensus 274 t~~~~l~~~~f 284 (284)
T cd07860 274 SAKAALAHPFF 284 (284)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 153
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=1.8e-28 Score=252.61 Aligned_cols=203 Identities=24% Similarity=0.352 Sum_probs=152.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++.++.||||+.+++ ++.+ ...+++++++ .+++|.++|. ....+++.++..++.||++||++||++||+|+
T Consensus 48 e~~~~~~l~~~~i~~~~~-~~~~---~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~ 122 (260)
T PF00069_consen 48 EIKILRRLRHPNIVQILD-VFQD---DNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHR 122 (260)
T ss_dssp HHHHHHHHTBTTBCHEEE-EEEE---SSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred hhhccccccccccccccc-cccc---ccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence 566888899999999877 4433 4456677776 5669999996 33448999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+...... .
T Consensus 123 dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-----------------------------------~--------------- 152 (260)
T PF00069_consen 123 DIKPENILLDENGEVKLIDFGSSVKLSEN-----------------------------------N--------------- 152 (260)
T ss_dssp SBSGGGEEESTTSEEEESSGTTTEESTST-----------------------------------T---------------
T ss_pred ccccccccccccccccccccccccccccc-----------------------------------c---------------
Confidence 99999999999999999999987432000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-CCCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||++. +..++.++||||||+++|+|
T Consensus 153 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 192 (260)
T PF00069_consen 153 ----------------------------------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYEL 192 (260)
T ss_dssp ----------------------------------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccccccccccccccccccccccccccccccccccccc
Confidence 0001146789999999998 77799999999999999999
Q ss_pred hC---CCCCCh--hhHHHHHhhcccCCCchhhhc---CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGE--EKTRTMSSLRHRVLPPQLLLK---FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||.... .....+........+...... .+...+++.+||+.||++|||+.++++||||
T Consensus 193 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 193 LTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 99 555441 222222222221111111111 1455699999999999999999999999997
No 154
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95 E-value=9.2e-28 Score=259.79 Aligned_cols=205 Identities=19% Similarity=0.244 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..++|+||+++++ ++.... .....++++|+.+++|.+++... ++..++..++.||+.||+|||++||
T Consensus 64 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi 139 (353)
T cd07850 64 RELVLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGI 139 (353)
T ss_pred HHHHHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 4566788899999999888 443222 22467899999888999988433 8899999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||+++..+....
T Consensus 140 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------- 173 (353)
T cd07850 140 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---------------------------------------------- 173 (353)
T ss_pred eeCCCCHHHEEECCCCCEEEccCccceeCCCCCC----------------------------------------------
Confidence 9999999999999999999999998843211100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+++.|+|||.+.+..++.++|||||||++|
T Consensus 174 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~ 208 (353)
T cd07850 174 ---------------------------------------------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 208 (353)
T ss_pred ---------------------------------------------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHH
Confidence 00135688999999999988999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc-C-------------------------------------CCchh---hhc-Cchh
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR-V-------------------------------------LPPQL---LLK-FPKE 298 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~-~-------------------------------------~~~~~---~~~-~~~~ 298 (712)
+|++ ||...+... .+..+... . .+... ... .+..
T Consensus 209 ~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (353)
T cd07850 209 EMIRGTVLFPGTDHID-QWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQA 287 (353)
T ss_pred HHHHCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHH
Confidence 9998 554432211 11111000 0 00000 001 1234
Q ss_pred HHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.++|.+||..||++|||+.|+|+||||..
T Consensus 288 ~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 288 RDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred HHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 58999999999999999999999998874
No 155
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=3.9e-28 Score=232.55 Aligned_cols=222 Identities=14% Similarity=0.226 Sum_probs=169.1
Q ss_pred eeeccceeeccCCCCCcccccccccc-cccccC----ceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHh
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCE-NEAAID----PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~-~~~~~~----~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
-+.++.-+|..+.|+|++.++. +|. ...... .+++|+.++..+|.-+|.....+++..++..++++++.||.|+
T Consensus 62 talreikiL~~lkHenv~nliE-ic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~i 140 (376)
T KOG0669|consen 62 TALREIKILQLLKHENVVNLIE-ICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYI 140 (376)
T ss_pred HHHHHHHHHHHhcchhHHHHHH-HHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHH
Confidence 4457777899999999998876 443 222222 4999999999999999977766799999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|...|+|||+||+|+||+.+|.++++|||+++.+...+-.
T Consensus 141 Hr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~---------------------------------------- 180 (376)
T KOG0669|consen 141 HRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNV---------------------------------------- 180 (376)
T ss_pred HHhhHHhhcccHhhEEEcCCceEEeeccccccceeccccc----------------------------------------
Confidence 9999999999999999999999999999998654222100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 257 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwS 257 (712)
.+.+-+..+-|.||++||.+.|.. |+++.|||.
T Consensus 181 ----------------------------------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWg 214 (376)
T KOG0669|consen 181 ----------------------------------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWG 214 (376)
T ss_pred ----------------------------------------------CCCCcccceeeeecCCHHHhhcccccCCcchhHh
Confidence 000011246699999999998876 999999999
Q ss_pred HHHHHHHhhC--CCCCChhhHHHHHh---hcccCCCch-------------------------hh------hcCchhHHH
Q 005147 258 LGVLLFELFC--PFSTGEEKTRTMSS---LRHRVLPPQ-------------------------LL------LKFPKEASF 301 (712)
Q Consensus 258 lGvll~eLl~--pf~~~~~~~~~~~~---~~~~~~~~~-------------------------~~------~~~~~~~~l 301 (712)
.||++.||++ |............. +.....+.. .. ...+..++|
T Consensus 215 AgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dL 294 (376)
T KOG0669|consen 215 AGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDL 294 (376)
T ss_pred HHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHH
Confidence 9999999999 66655444333332 222111100 00 011245599
Q ss_pred HHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 302 CLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
+.++|..||.+|+++.++|+|.||.....+.
T Consensus 295 le~ll~~DP~kR~~ad~alnh~~F~kdp~pq 325 (376)
T KOG0669|consen 295 LEKLLKLDPTKRIDADQALNHDFFWKDPMPQ 325 (376)
T ss_pred HHHHhccCcccCcchHhhhchhhhhcCCcch
Confidence 9999999999999999999999999876653
No 156
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=6.9e-28 Score=254.19 Aligned_cols=207 Identities=15% Similarity=0.177 Sum_probs=155.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..+.|+|++.+++ .+.. ...+++++++ .|++|.+++... .+++.++..++.||+.||+|||++||+||
T Consensus 67 e~~~l~~~~h~~v~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H~ 140 (296)
T cd06654 67 EILVMRENKNPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHR 140 (296)
T ss_pred HHHHHHhCCCCCEeeEEE-EEEe---CCEEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 445678899999999887 3422 3356777776 689999998543 37899999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+........
T Consensus 141 dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------- 171 (296)
T cd06654 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------- 171 (296)
T ss_pred CCCHHHEEEcCCCCEEECccccchhcccccc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 172 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~ 210 (296)
T cd06654 172 -----------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210 (296)
T ss_pred -----------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHH
Confidence 000135788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+ ||..................+..... ..+...+++.+||..+|.+|||+.++++||||.....
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 211 EGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred hCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 9 66544332222222222221211222 2344558999999999999999999999999987644
No 157
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95 E-value=9.4e-28 Score=251.02 Aligned_cols=205 Identities=16% Similarity=0.205 Sum_probs=148.5
Q ss_pred eeeccC-CCCCccccccccccccc--ccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 30 VELTHG-DHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~~--~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+ +|+|++++++.+..... ....+++++|+ .+++|.+++.. ....+++..++.++.||+.||.|||++||+
T Consensus 64 ~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~iv 143 (282)
T cd06636 64 NMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVI 143 (282)
T ss_pred HHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 344554 79999998884332221 23467777777 57799998843 334588888999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||++.......
T Consensus 144 H~dl~~~nili~~~~~~~l~dfg~~~~~~~~~------------------------------------------------ 175 (282)
T cd06636 144 HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV------------------------------------------------ 175 (282)
T ss_pred cCCCCHHHEEECCCCCEEEeeCcchhhhhccc------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLG 259 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlG 259 (712)
. ......|+..|+|||.+. +..++.++||||||
T Consensus 176 -------------------------------------~-----~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG 213 (282)
T cd06636 176 -------------------------------------G-----RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG 213 (282)
T ss_pred -------------------------------------c-----CCCcccccccccCHhhcCcccCcCcCCCcccchhHHH
Confidence 0 000145788999999985 34588899999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++|||++ ||........ ...+.....+......+ +...+||.+||+.+|.+|||+.++|+||||
T Consensus 214 ~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 214 ITAIEMAEGAPPLCDMHPMRA-LFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HHHHHHHhCCCCccccCHHhh-hhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 99999999 5543332221 12222222222222223 345699999999999999999999999997
No 158
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=5.4e-28 Score=259.87 Aligned_cols=214 Identities=18% Similarity=0.235 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++|+|++++++ ++.... ....+++++++.+++|.+++...+ .+++..+..++.||+.||.|||++|++
T Consensus 53 ~E~~~l~~l~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~i~ 130 (337)
T cd07858 53 REIKLLRHLDHENVIAIKD-IMPPPHREAFNDVYIVYELMDTDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHSANVL 130 (337)
T ss_pred HHHHHHHhcCCCCccchHH-heecccccccCcEEEEEeCCCCCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4666788899999999887 443222 223578999998899999996544 499999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++....... .+
T Consensus 131 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------------------------~~------------- 164 (337)
T cd07858 131 HRDLKPSNLLLNANCDLKICDFGLARTTSEKG---------------------------------DF------------- 164 (337)
T ss_pred cCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------------------------cc-------------
Confidence 99999999999999999999999874321110 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~ 263 (712)
.....++.+|+|||.+.. ..++.++|||||||++|
T Consensus 165 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 200 (337)
T cd07858 165 --------------------------------------------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFA 200 (337)
T ss_pred --------------------------------------------ccccccccCccChHHHhcCCCCCCcccHHHHHHHHH
Confidence 001356889999998865 45899999999999999
Q ss_pred HhhC---CCCCChhhH--HHHHhhcc------------------------cCCC---chhhhcCchhHHHHHHcCCCCCC
Q 005147 264 ELFC---PFSTGEEKT--RTMSSLRH------------------------RVLP---PQLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 264 eLl~---pf~~~~~~~--~~~~~~~~------------------------~~~~---~~~~~~~~~~~~li~~~L~~dP~ 311 (712)
+|++ ||...+... ........ ...+ .......+...+++.+||..+|+
T Consensus 201 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 280 (337)
T cd07858 201 ELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPS 280 (337)
T ss_pred HHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChh
Confidence 9998 443221110 00000000 0000 00112234455999999999999
Q ss_pred CCCCHHHHhcCcCCCCCcCch
Q 005147 312 GRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
+|||+.++|+||||.......
T Consensus 281 ~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 281 KRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred hccCHHHHHcCcchhhhcCcc
Confidence 999999999999998765543
No 159
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95 E-value=7.7e-28 Score=248.97 Aligned_cols=206 Identities=19% Similarity=0.225 Sum_probs=157.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
++..+++.++|||++.+++ .+... ..+++++++ .+++|.+++......+++..+..++.||+.||+|||+ .|++
T Consensus 48 ~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~ 123 (265)
T cd06605 48 RELDILHKCNSPYIVGFYG-AFYNN---GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKII 123 (265)
T ss_pred HHHHHHHHCCCCchhhhhe-eeecC---CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCee
Confidence 3445678889999999887 34222 557777777 5699999996544568999999999999999999999 9999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||.+.......
T Consensus 124 H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~------------------------------------------------ 155 (265)
T cd06605 124 HRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL------------------------------------------------ 155 (265)
T ss_pred cCCCCHHHEEECCCCCEEEeecccchhhHHHH------------------------------------------------
Confidence 99999999999999999999999873221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....++..|+|||.+.+..++.++|||||||++|+
T Consensus 156 --------------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~ 191 (265)
T cd06605 156 --------------------------------------------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIE 191 (265)
T ss_pred --------------------------------------------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 000346788999999988889999999999999999
Q ss_pred hhC---CCCCC----hhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||... ......+..+.....+..... ..+...++|.+||..+|.+|||+.+++.||||+..
T Consensus 192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 192 LATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 999 55443 122223333333322222222 23455699999999999999999999999999764
No 160
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=1.2e-27 Score=252.45 Aligned_cols=208 Identities=15% Similarity=0.180 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+...++.+.|||++.+++ .+.. ...+++++++ .|++|.+++... .+++.++..++.||+.||.|||++||+|
T Consensus 65 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H 138 (296)
T cd06655 65 NEILVMKELKNPNIVNFLD-SFLV---GDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIH 138 (296)
T ss_pred HHHHHHHhcCCCceeeeee-eEec---CceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3456678899999999887 4422 3456777776 699999988543 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 139 ~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 170 (296)
T cd06655 139 RDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------ 170 (296)
T ss_pred CCCCHHHEEECCCCCEEEccCccchhcccccc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 171 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~l 208 (296)
T cd06655 171 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 208 (296)
T ss_pred ------------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||..................+.... ...+...+++.+||..+|.+|||+.++++||||.....
T Consensus 209 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 209 VEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred HhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 99 5654443322222211111111112 22344558999999999999999999999999987543
No 161
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=2.1e-27 Score=247.36 Aligned_cols=207 Identities=17% Similarity=0.199 Sum_probs=158.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.+.|+|++.+++ .+.++ ..+++++|+ .+++|.+++... .+++..++.++.||+.||.|||++||+|+
T Consensus 49 e~~~l~~l~h~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~ 122 (274)
T cd06609 49 EIQFLSQCRSPYITKYYG-SFLKG---SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHR 122 (274)
T ss_pred HHHHHHHcCCCCeeeeeE-EEEEC---CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 445678889999999887 44222 456677666 689999999554 58999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||+++..+....
T Consensus 123 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------- 153 (274)
T cd06609 123 DIKAANILLSEEGDVKLADFGVSGQLTSTMS------------------------------------------------- 153 (274)
T ss_pred CCCHHHEEECCCCCEEEcccccceeeccccc-------------------------------------------------
Confidence 9999999999999999999998854321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 154 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~ 192 (274)
T cd06609 154 -----------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELA 192 (274)
T ss_pred -----------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 001135788999999999888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+ ||...... .....+.....+..... ..+...+++.+||..+|.+|||++++++||||......
T Consensus 193 tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 193 KGEPPLSDLHPM-RVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred hCCCCcccCchH-HHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc
Confidence 9 55433322 22222233322222222 23456699999999999999999999999999987554
No 162
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=7.5e-28 Score=258.23 Aligned_cols=216 Identities=15% Similarity=0.155 Sum_probs=155.0
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..+ +||||+++++...........+++++++.+++|.+++... ..+++.+++.++.||+.||.|||++||+||
T Consensus 51 E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~ 129 (332)
T cd07857 51 ELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHR 129 (332)
T ss_pred HHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 44456666 6999999887332222334567889999889999999544 448999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++|+|||.+..........
T Consensus 130 dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~----------------------------------------------- 162 (332)
T cd07857 130 DLKPGNLLVNADCELKICDFGLARGFSENPGEN----------------------------------------------- 162 (332)
T ss_pred CCCHHHeEEcCCCCEEeCcCCCceecccccccc-----------------------------------------------
Confidence 999999999999999999999885432110000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
........|+..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 163 ---------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l 203 (332)
T cd07857 163 ---------------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAEL 203 (332)
T ss_pred ---------------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 000011467999999998765 4589999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc--------------------------cCCCch----hhhcCchhHHHHHHcCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH--------------------------RVLPPQ----LLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~--------------------------~~~~~~----~~~~~~~~~~li~~~L~~dP~~ 312 (712)
++ ||...... .....+.. ...... .....+...+|+.+||+.+|.+
T Consensus 204 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 282 (332)
T cd07857 204 LGRKPVFKGKDYV-DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTK 282 (332)
T ss_pred HhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCccc
Confidence 98 44332211 11110000 000000 1112345569999999999999
Q ss_pred CCCHHHHhcCcCCCCCcCc
Q 005147 313 RPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~~~ 331 (712)
|||+.+++.||||....++
T Consensus 283 R~t~~~ll~~~~~~~~~~~ 301 (332)
T cd07857 283 RISVEEALEHPYLAIWHDP 301 (332)
T ss_pred CCCHHHHhcChhhhhhcCc
Confidence 9999999999999866543
No 163
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=1.3e-27 Score=250.73 Aligned_cols=208 Identities=16% Similarity=0.188 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++|+|++.+++ .+.. ...+++++++ .+++|.+++.. ....+++..+..++.||+.||.|||+.||+
T Consensus 49 ~E~~il~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ii 124 (285)
T cd05632 49 NEKQILEKVNSQFVVNLAY-AYET---KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124 (285)
T ss_pred HHHHHHHHcCCcCceeEEE-EEec---CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3556788999999999777 3322 2356677766 68899988843 334599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 125 H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------ 156 (285)
T cd05632 125 YRDLKPENILLDDYGHIRISDLGLAVKIPEGE------------------------------------------------ 156 (285)
T ss_pred ecCCCHHHEEECCCCCEEEecCCcceecCCCC------------------------------------------------
Confidence 99999999999999999999999873221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 157 -------------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~ 193 (285)
T cd05632 157 -------------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYE 193 (285)
T ss_pred -------------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHH
Confidence 0001357999999999988889999999999999999
Q ss_pred hhC---CCCCChhhHH---HHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTR---TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
|++ ||........ ....+... .+.......+...+|+.+||+.+|++||+ +.++++|+||.....
T Consensus 194 l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 194 MIEGQSPFRGRKEKVKREEVDRRVLET-EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF 269 (285)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhhhcc-ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence 998 6654433211 11111111 11111122344569999999999999999 889999999998743
No 164
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.95 E-value=1.2e-27 Score=246.97 Aligned_cols=205 Identities=20% Similarity=0.287 Sum_probs=156.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhh----
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH---- 99 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lH---- 99 (712)
+..+++.+.|+|++++++ .+.. .....+++++|+ .+++|.+++.. ....+++.+++.++.||+.||+|||
T Consensus 49 e~~~l~~l~~~~i~~~~~-~~~~-~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~ 126 (265)
T cd08217 49 EVNILRELKHPNIVRYYD-RIID-RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSD 126 (265)
T ss_pred HHHHHHhcCCCccceeee-eeec-CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 445688899999999887 3322 223456677776 68999999843 2456899999999999999999999
Q ss_pred -hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 100 -SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 100 -s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
+.+|+|+||+|+||+++.++.++++|||.+........ +
T Consensus 127 ~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~---------------------------------~------- 166 (265)
T cd08217 127 PGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS---------------------------------F------- 166 (265)
T ss_pred ccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc---------------------------------c-------
Confidence 99999999999999999999999999998854321100 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.....|++.|+|||.+.+..++.++|+|||
T Consensus 167 --------------------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~sl 196 (265)
T cd08217 167 --------------------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSL 196 (265)
T ss_pred --------------------------------------------------ccccccCCCccChhhhcCCCCCchhHHHHH
Confidence 001357889999999988889999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+++|+|++ ||.... .......+.....+.......+...+++.+||..+|.+|||+.+|++|||+
T Consensus 197 G~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 197 GCLIYELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 999999998 554433 233334444444433333334555699999999999999999999999996
No 165
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.95 E-value=1.5e-27 Score=246.61 Aligned_cols=205 Identities=17% Similarity=0.194 Sum_probs=156.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++||||+++++ .+. ....+++++++ .|++|.+++.+.. .+++..+..++.||+.||.|||++|++|+
T Consensus 43 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~~h~ 117 (262)
T cd05572 43 EKEILEECNHPFIVKLYR-TFK---DKKYIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGIIYR 117 (262)
T ss_pred HHHHHHhCCCCCEeeeee-eEE---cCCccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccC
Confidence 445678899999999888 442 22456777776 7999999995543 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+.......
T Consensus 118 dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------------------------------------------------- 147 (262)
T cd05572 118 DLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------------------------------------------------- 147 (262)
T ss_pred CCCHHHEEEcCCCCEEEeeCCcccccCccc--------------------------------------------------
Confidence 999999999999999999999874321110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|++||.+.+..++.++|+|||||++|+|+
T Consensus 148 -----------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~ 186 (262)
T cd05572 148 -----------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL 186 (262)
T ss_pred -----------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH
Confidence 000135688999999998888999999999999999999
Q ss_pred C---CCCCChh-hHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 267 C---PFSTGEE-KTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
+ ||..... ....+..+.. ...+.......+...+++.+||..+|.+||+ +.|+++||||+..
T Consensus 187 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 187 TGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred hCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 8 5654431 2233333332 1111211222455669999999999999999 9999999999865
No 166
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.95 E-value=1.6e-27 Score=246.85 Aligned_cols=209 Identities=18% Similarity=0.147 Sum_probs=152.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+.+++ .+.+. ....+++++|+ .|++|.+++.+.. .+++..++.++.||+.||.|||++||+|
T Consensus 53 ~E~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~H 129 (265)
T cd06652 53 CEIQLLKNLLHERIVQYYG-CLRDP-MERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSNMIVH 129 (265)
T ss_pred HHHHHHHhcCCCCeeeEEe-EeccC-CCceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 3456788899999999887 33222 23456677777 5899999995543 3889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+......... .
T Consensus 130 ~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~--------------------------------~-------------- 163 (265)
T cd06652 130 RDIKGANILRDSVGNVKLGDFGASKRLQTICLS--------------------------------G-------------- 163 (265)
T ss_pred CCCCHHHEEecCCCCEEECcCcccccccccccc--------------------------------c--------------
Confidence 999999999999999999999987432110000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ......|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 164 ---------------------------------~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 202 (265)
T cd06652 164 ---------------------------------T--------GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEM 202 (265)
T ss_pred ---------------------------------c--------ccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHH
Confidence 0 00013478899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
++ ||..................+...........+++.+|+. +|++||+++++++|||++
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 203 LTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 98 5543332322222222222222222223345589999984 999999999999999984
No 167
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.95 E-value=1.7e-27 Score=251.21 Aligned_cols=210 Identities=18% Similarity=0.262 Sum_probs=155.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+..+++.++|+|++++++ ++.+ ...+++++|+.+++|.+++......+++.+++.++.||+.||.|||++||+|+|
T Consensus 52 e~~~l~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d 127 (298)
T cd07841 52 EIKLLQELKHPNIIGLLD-VFGH---KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRD 127 (298)
T ss_pred HHHHHhhcCCCCChhhhh-eeec---CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 455788899999999888 4433 346778888879999999965544689999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.++++|||++...+....
T Consensus 128 l~p~nill~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 157 (298)
T cd07841 128 LKPNNLLIASDGVLKLADFGLARSFGSPNR-------------------------------------------------- 157 (298)
T ss_pred CChhhEEEcCCCCEEEccceeeeeccCCCc--------------------------------------------------
Confidence 999999999999999999998854322100
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHhh
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+. .++.++|||||||++|||+
T Consensus 158 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~ 197 (298)
T cd07841 158 ----------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELL 197 (298)
T ss_pred ----------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 00002457889999988653 4789999999999999999
Q ss_pred C--CCCCChhhHHHHHhhcccC----------------------CCch-----hhhcCchhHHHHHHcCCCCCCCCCCHH
Q 005147 267 C--PFSTGEEKTRTMSSLRHRV----------------------LPPQ-----LLLKFPKEASFCLWLLHPEPSGRPKMG 317 (712)
Q Consensus 267 ~--pf~~~~~~~~~~~~~~~~~----------------------~~~~-----~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (712)
+ |++...........+.... .++. +........+|+.+||..+|.+|||+.
T Consensus 198 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~ 277 (298)
T cd07841 198 LRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITAR 277 (298)
T ss_pred cCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHH
Confidence 8 3322222211111111000 0000 011123445899999999999999999
Q ss_pred HHhcCcCCCCCcCc
Q 005147 318 ELLQSEFLNEPRDS 331 (712)
Q Consensus 318 eiL~hp~~~~~~~~ 331 (712)
++|+||||.+...+
T Consensus 278 e~l~~~~~~~~~~~ 291 (298)
T cd07841 278 QALEHPYFSNDPAP 291 (298)
T ss_pred HHhhCccccCCCCC
Confidence 99999999987553
No 168
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=2.9e-27 Score=248.24 Aligned_cols=210 Identities=18% Similarity=0.231 Sum_probs=155.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+++.++||||+.+++ .|.+. ....+++++|+ .|++|.+++. .....+++..+..++.||+.||.|||+.|
T Consensus 48 ~e~~~l~~l~h~~iv~~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~ 125 (287)
T cd06621 48 RELEINKSCKSPYIVKYYG-AFLDE-SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK 125 (287)
T ss_pred HHHHHHHhCCCCCeeeeee-EEEcc-CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4455788899999999887 44332 23456777776 5899998763 23445899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
++|+||+|+||+++.++.++++|||++.......
T Consensus 126 i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 159 (287)
T cd06621 126 IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL---------------------------------------------- 159 (287)
T ss_pred cccCCCCHHHEEEecCCeEEEeeccccccccccc----------------------------------------------
Confidence 9999999999999999999999999873321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....++..|+|||.+.+..++.++|||||||++
T Consensus 160 ----------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 193 (287)
T cd06621 160 ----------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTL 193 (287)
T ss_pred ----------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 0003457889999999888899999999999999
Q ss_pred HHhhC---CCCCCh----hhHHHHHhhcccCCCchhhh------cC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGE----EKTRTMSSLRHRVLPPQLLL------KF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~----~~~~~~~~~~~~~~~~~~~~------~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||.... ........+.... ++.+.. .+ +...+|+.+||..+|.+|||+.|+++||||...
T Consensus 194 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 194 LEVAQNRFPFPPEGEPPLGPIELLSYIVNMP-NPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred HHHHhCCCCCCcccCCCCChHHHHHHHhcCC-chhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 99999 454331 1122222222211 111111 11 244599999999999999999999999999766
Q ss_pred cCc
Q 005147 329 RDS 331 (712)
Q Consensus 329 ~~~ 331 (712)
..+
T Consensus 273 ~~~ 275 (287)
T cd06621 273 MKK 275 (287)
T ss_pred ccc
Confidence 553
No 169
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=1.3e-27 Score=255.45 Aligned_cols=202 Identities=18% Similarity=0.257 Sum_probs=149.9
Q ss_pred eeeccCCC-CCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 30 VELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 30 ~~l~~~~H-~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
.++..++| ++++.+++ ++.. .+.+++++|+ .|++|.+++...+ .+++.+++.|+.||+.||+|||++||+|||
T Consensus 52 ~~l~~~~~~~~i~~~~~-~~~~---~~~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivHrD 126 (323)
T cd05615 52 RVLALQDKPPFLTQLHS-CFQT---VDRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGIIYRD 126 (323)
T ss_pred HHHHhccCCCchhheee-EEec---CCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 34555655 55556555 4422 2457777777 5899999985544 499999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.++++|||+++.......
T Consensus 127 ikp~Nill~~~~~ikL~Dfg~~~~~~~~~~-------------------------------------------------- 156 (323)
T cd05615 127 LKLDNVMLDSEGHIKIADFGMCKEHMVDGV-------------------------------------------------- 156 (323)
T ss_pred CCHHHeEECCCCCEEEeccccccccCCCCc--------------------------------------------------
Confidence 999999999999999999998743211000
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......|++.|+|||++.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt 196 (323)
T cd05615 157 ----------------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 196 (323)
T ss_pred ----------------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHh
Confidence 0001458999999999998889999999999999999999
Q ss_pred ---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCC
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~ 328 (712)
||...... .....+...... ......+...+++.+||..+|.+|++ .+++++||||...
T Consensus 197 G~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 197 GQPPFDGEDED-ELFQSIMEHNVS-YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred CCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 66544332 223333222111 11122345569999999999999997 5789999999865
No 170
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.95 E-value=2e-27 Score=251.85 Aligned_cols=212 Identities=17% Similarity=0.256 Sum_probs=153.7
Q ss_pred ccceeeccCCCCCccccccccccccc-----ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA-----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~-----~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+++.+.||||+++++ ++.... ....+++++|+.+++|.+++......+++.+++.++.||+.||.|||++
T Consensus 60 ~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 138 (310)
T cd07865 60 REIKILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN 138 (310)
T ss_pred HHHHHHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4556788999999999887 443322 1246789999988899998866555689999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+|+||||+||+++.++.++++|||.+......... .
T Consensus 139 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~---------- 176 (310)
T cd07865 139 KILHRDMKAANILITKDGILKLADFGLARAFSLSKNS--------------------------------K---------- 176 (310)
T ss_pred CeeccCCCHHHEEECCCCcEEECcCCCcccccCCccc--------------------------------C----------
Confidence 9999999999999999999999999988543211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGv 260 (712)
+.......++..|+|||.+.+.. ++.++|||||||
T Consensus 177 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 212 (310)
T cd07865 177 --------------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGC 212 (310)
T ss_pred --------------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHH
Confidence 00000135688999999886654 789999999999
Q ss_pred HHHHhhC---CCCCChhhH--HHHHhhcccCC------------------Cch--------hh--hcCchhHHHHHHcCC
Q 005147 261 LLFELFC---PFSTGEEKT--RTMSSLRHRVL------------------PPQ--------LL--LKFPKEASFCLWLLH 307 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~--~~~~~~~~~~~------------------~~~--------~~--~~~~~~~~li~~~L~ 307 (712)
++|||++ ||....... .....+..... +.. +. ...+...+||.+||.
T Consensus 213 ~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~ 292 (310)
T cd07865 213 IMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLV 292 (310)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhc
Confidence 9999998 443332211 11111111100 000 00 012344589999999
Q ss_pred CCCCCCCCHHHHhcCcCC
Q 005147 308 PEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~ 325 (712)
.+|.+|||++++|+||||
T Consensus 293 ~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 293 LDPAKRIDADTALNHDFF 310 (310)
T ss_pred CChhhccCHHHHhcCCCC
Confidence 999999999999999998
No 171
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.95 E-value=1.7e-27 Score=248.88 Aligned_cols=207 Identities=19% Similarity=0.235 Sum_probs=155.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++++++ .+.. ...+++++|+ .+++|.+++.+....+++.+++.++.||+.||.|||++||+|+
T Consensus 52 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~ 127 (280)
T cd06611 52 EIDILSECKHPNIVGLYE-AYFY---ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127 (280)
T ss_pred HHHHHHhCCCCceeEEEE-EEec---CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 445788899999999888 4322 3356777776 6889999986655669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.......
T Consensus 128 dl~p~nili~~~~~~~l~d~g~~~~~~~~~-------------------------------------------------- 157 (280)
T cd06611 128 DLKAGNILLTLDGDVKLADFGVSAKNKSTL-------------------------------------------------- 157 (280)
T ss_pred CCChhhEEECCCCCEEEccCccchhhcccc--------------------------------------------------
Confidence 999999999999999999999763221100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvl 261 (712)
.......|++.|+|||.+. +..++.++|||||||+
T Consensus 158 ----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~i 197 (280)
T cd06611 158 ----------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGIT 197 (280)
T ss_pred ----------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHH
Confidence 0001145788999999974 3447889999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCch-hh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|+|++ ||..... ...+..+.....+.. .. .......+++.+||..+|.+||++.++|+||||....
T Consensus 198 l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 198 LIELAQMEPPHHELNP-MRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred HHHHHhCCCCcccCCH-HHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence 999999 5543322 223333333222211 11 1234556999999999999999999999999998763
No 172
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.95 E-value=1.9e-27 Score=249.90 Aligned_cols=206 Identities=14% Similarity=0.125 Sum_probs=149.0
Q ss_pred eeeccC-CCCCccccccccccccc-ccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 30 VELTHG-DHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~~-~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+ +|||++.+++.+...+. ....+++++|+ .|++|.++++. ....+++..++.++.||+.||+|||+.||
T Consensus 70 ~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 149 (291)
T cd06639 70 NILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI 149 (291)
T ss_pred HHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 345555 89999998883332221 22456777776 68999998842 34458999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+|+||||+||+++.++.++++|||++........
T Consensus 150 vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 183 (291)
T cd06639 150 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---------------------------------------------- 183 (291)
T ss_pred eccCCCHHHEEEcCCCCEEEeecccchhcccccc----------------------------------------------
Confidence 9999999999999999999999998743211100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-----CCCccchHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDIYRL 258 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-----~~~~sDIwSl 258 (712)
......|+..|+|||.+.... ++.++|||||
T Consensus 184 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 219 (291)
T cd06639 184 --------------------------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSL 219 (291)
T ss_pred --------------------------------------------cccCccCCccccChhhhcCCCCcccccCCccchHHH
Confidence 000135688899999985432 6899999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCc-hhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
||++|||++ ||.......... .+.....+. ... .......+++.+||+.+|++||++.++++||||+
T Consensus 220 Gvi~~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 220 GITAIELGDGDPPLFDMHPVKTLF-KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHhhCCCCCCCCcHHHHHH-HHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 999999998 554433322222 222222111 111 1223455899999999999999999999999985
No 173
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.95 E-value=1.4e-27 Score=245.78 Aligned_cols=204 Identities=20% Similarity=0.253 Sum_probs=157.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++++++|+||+++++ ++.+ ...+++++|+ .|++|.+++.+. ...+++.++..++.|++.+|.|||+.|++
T Consensus 48 ~e~~~l~~~~h~~i~~~~~-~~~~---~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08221 48 NEIVILSLLQHPNIIAYYN-HFMD---DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGIL 123 (256)
T ss_pred HHHHHHHhCCCCCeeEEEe-EEec---CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4556889999999999888 4422 2456666666 689999999543 45589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.+|++|||.+........
T Consensus 124 h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd08221 124 HRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS----------------------------------------------- 156 (256)
T ss_pred ccCCChHhEEEeCCCCEEECcCcceEEcccccc-----------------------------------------------
Confidence 999999999999999999999998743211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+..++.++|+|||||++|+
T Consensus 157 -------------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~ 193 (256)
T cd08221 157 -------------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYE 193 (256)
T ss_pred -------------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHH
Confidence 0001457899999999988889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||.... .......+....+++..........+++.+||..+|.+||++.++|+|+|+
T Consensus 194 l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 194 LLTLKRTFDATN-PLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHCCCCCCCCC-HHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 998 554332 233333444444443333334556699999999999999999999999986
No 174
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=7.1e-28 Score=254.25 Aligned_cols=208 Identities=15% Similarity=0.189 Sum_probs=155.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|+|++.+++ .+.. ...+++++|+ .|++|.+++.+. .+++.+++.++.|++.||.|||+.||+|
T Consensus 65 ~e~~~l~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~H 138 (297)
T cd06656 65 NEILVMRENKNPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVIH 138 (297)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec---CCEEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3455788899999999887 4422 2356667766 699999998543 3789999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+........
T Consensus 139 ~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~------------------------------------------------ 170 (297)
T cd06656 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------ 170 (297)
T ss_pred CCCCHHHEEECCCCCEEECcCccceEccCCcc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 171 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l 208 (297)
T cd06656 171 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 208 (297)
T ss_pred ------------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||..................+....... +...+|+.+||..+|.+||++.++++||||...+.
T Consensus 209 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 209 VEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred HhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 99 5544333222221111121111122222 34458999999999999999999999999987655
No 175
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.95 E-value=2.1e-27 Score=249.15 Aligned_cols=207 Identities=19% Similarity=0.322 Sum_probs=157.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++.+++ .+.. ....++++++ .|++|.+++.. ..+++.+++.++.||+.||+|||++||+||
T Consensus 66 e~~~l~~~~h~~vv~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~ 139 (285)
T cd06648 66 EVVIMRDYQHPNIVEMYS-SYLV---GDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHR 139 (285)
T ss_pred HHHHHHHcCCCChheEEE-EEEc---CCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 455688899999999888 3322 2345666665 69999999965 348999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+.......
T Consensus 140 dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-------------------------------------------------- 169 (285)
T cd06648 140 DIKSDSILLTSDGRVKLSDFGFCAQVSKEV-------------------------------------------------- 169 (285)
T ss_pred CCChhhEEEcCCCcEEEcccccchhhccCC--------------------------------------------------
Confidence 999999999999999999999763221100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
+ ......|+..|+|||.+.+..++.++|||||||++|+|+
T Consensus 170 ---------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell 209 (285)
T cd06648 170 ---------------------------------------P-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMV 209 (285)
T ss_pred ---------------------------------------c-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence 0 000135788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCch--hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+ ||.... ....+..+.....+.. .....+...+|+.+||..+|.+|||+.++++||||.....+
T Consensus 210 ~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 278 (285)
T cd06648 210 DGEPPYFNEP-PLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPP 278 (285)
T ss_pred hCCCCCcCCC-HHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCc
Confidence 9 554433 2333444443322211 11123456699999999999999999999999999887653
No 176
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95 E-value=1.1e-27 Score=252.12 Aligned_cols=208 Identities=18% Similarity=0.279 Sum_probs=156.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...+..++|+|++.+++ .+.. ...+++++|+ .+++|.+++... .+++.+++.++.||+.||+|||++||+|
T Consensus 68 ~e~~~l~~l~h~~ii~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH 141 (292)
T cd06658 68 NEVVIMRDYHHENVVDMYN-SYLV---GDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIH 141 (292)
T ss_pred HHHHHHHhCCCCcHHHHHH-heec---CCeEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4556788899999999888 3322 2456777776 588999988443 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++........
T Consensus 142 ~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------ 173 (292)
T cd06658 142 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------------------------------------------------ 173 (292)
T ss_pred cCCCHHHEEEcCCCCEEEccCcchhhcccccc------------------------------------------------
Confidence 99999999999999999999998743211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 174 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el 211 (292)
T cd06658 174 ------------------------------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 211 (292)
T ss_pred ------------------------------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
++ ||...... ..+..+.....+. ..........+++.+||..+|.+|||+.++++||||.....+
T Consensus 212 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 212 IDGEPPYFNEPPL-QAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 99 55543322 2233332221111 111223445589999999999999999999999999976554
No 177
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=6.2e-27 Score=248.98 Aligned_cols=204 Identities=17% Similarity=0.204 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..++..++|||++.+++ ++.+ ....++++|+..++|.+++......+++.+++.++.||+.||.|||++||+|+
T Consensus 70 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~ 145 (313)
T cd06633 70 KEVKFLQQLKHPNTIEYKG-CYLK---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 145 (313)
T ss_pred HHHHHHHhCCCCCCccEEE-EEEe---CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 3455788899999999887 4433 24578888888788998886555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......
T Consensus 146 dl~p~nili~~~~~~kL~dfg~~~~~~~~--------------------------------------------------- 174 (313)
T cd06633 146 DIKAGNILLTEPGQVKLADFGSASKSSPA--------------------------------------------------- 174 (313)
T ss_pred CCChhhEEECCCCCEEEeecCCCcccCCC---------------------------------------------------
Confidence 99999999999999999999976321000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
....|+..|+|||.+. ...++.++|||||||++|
T Consensus 175 -------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~ 211 (313)
T cd06633 175 -------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 211 (313)
T ss_pred -------------------------------------------CCccccccccChhhccccCCCCCCchhhHHHHHHHHH
Confidence 0135788899999984 355889999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCc-hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|++ ||........... +.....+......++ ...+|+.+||+.+|.+||++.+++.||||....
T Consensus 212 el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 212 ELAERKPPLFNMNAMSALYH-IAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHhCCCCCCCCChHHHHHH-HHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 9998 5554433332222 222222322222233 456999999999999999999999999999754
No 178
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=4.7e-28 Score=259.53 Aligned_cols=207 Identities=21% Similarity=0.213 Sum_probs=165.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++.-++..++|||||++|. +++ ....+|+|||| .|+.|.++|.+.++ +.+.+++.+|.|++.||+|||+++|||
T Consensus 104 rev~imk~l~HPnIvkl~~-v~~---t~~~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~ivH 178 (596)
T KOG0586|consen 104 REVDIMKSLNHPNIVKLFS-VIE---TEATLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIVH 178 (596)
T ss_pred HHHHHHHhcCCcceeeeee-eee---ecceeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhcceec
Confidence 6777899999999999888 553 34578889998 59999999977776 667999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||.+||||+.+-.+||+|||++..+....+
T Consensus 179 rdLk~eNilL~~~mnikIaDfgfS~~~~~~~~------------------------------------------------ 210 (596)
T KOG0586|consen 179 RDLKAENILLDENMNIKIADFGFSTFFDYGLM------------------------------------------------ 210 (596)
T ss_pred cccchhhcccccccceeeeccccceeeccccc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.-..+|++.|+|||++.+..| ++.+|+||||++||-
T Consensus 211 -------------------------------------------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~ 247 (596)
T KOG0586|consen 211 -------------------------------------------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYA 247 (596)
T ss_pred -------------------------------------------ccccCCCCCccChHhhcCcccCCcceehhhhhhhhee
Confidence 011689999999999999886 689999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|++ ||....-....-..++....-+.+ ...+..++|.++|.++|.+|++.+++..|.|++.....
T Consensus 248 LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 248 LVEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred eeecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 998 787544332222233332222222 23455689999999999999999999999999876543
No 179
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.95 E-value=3.5e-27 Score=250.09 Aligned_cols=205 Identities=16% Similarity=0.148 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++|||++++++ ++.+ ....++++|+..++|.+++......+++.++..++.||+.||.|||++||+|+
T Consensus 64 ~Ei~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~ 139 (307)
T cd06607 64 KEVRFLQQLRHPNTIEYKG-CYLR---EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHR 139 (307)
T ss_pred HHHHHHHhCCCCCEEEEEE-EEEe---CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 3455788899999999887 5432 34578888888788988885444558999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......
T Consensus 140 dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--------------------------------------------------- 168 (307)
T cd06607 140 DIKAGNILLTEPGTVKLADFGSASLVSPA--------------------------------------------------- 168 (307)
T ss_pred CCCcccEEECCCCCEEEeecCcceecCCC---------------------------------------------------
Confidence 99999999999999999999987321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
....+++.|+|||.+. ...++.++|||||||++|
T Consensus 169 -------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~ 205 (307)
T cd06607 169 -------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205 (307)
T ss_pred -------------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHH
Confidence 0034678899999884 345889999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++ ||.......... .+.....+......+ ....+++.+||..+|.+||++.+++.||||.....
T Consensus 206 el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 206 ELAERKPPLFNMNAMSALY-HIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred HHHcCCCCCCCccHHHHHH-HHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence 9999 454433322222 222222222222222 34459999999999999999999999999987653
No 180
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=7.6e-28 Score=258.04 Aligned_cols=207 Identities=15% Similarity=0.211 Sum_probs=154.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|+||+.+++ .+.+ ...++++||| .|++|.+++.+....+++..++.++.||+.||+|||++||+||
T Consensus 51 e~~~l~~~~~~~i~~l~~-~~~~---~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHr 126 (331)
T cd05624 51 ERNVLVNGDCQWITTLHY-AFQD---ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHR 126 (331)
T ss_pred HHHHHHhCCCCCEeeEEE-EEEc---CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 345677789999999887 4432 3456777777 6999999996644568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||++.........
T Consensus 127 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~------------------------------------------------ 158 (331)
T cd05624 127 DIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV------------------------------------------------ 158 (331)
T ss_pred cCchHHEEEcCCCCEEEEeccceeeccCCCce------------------------------------------------
Confidence 99999999999999999999988443211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||++.+ ..++.++|||||||+
T Consensus 159 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvi 197 (331)
T cd05624 159 -----------------------------------------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 197 (331)
T ss_pred -----------------------------------------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehh
Confidence 0001468999999999875 458899999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhccc----CCCchhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~ 328 (712)
+|||++ ||...... .....+... .+|...........+++.+||..++.+ |++++++++||||...
T Consensus 198 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 198 MYEMLYGETPFYAESLV-ETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hhhhhhCCCCccCCCHH-HHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 999999 66544332 222222221 123333333455669999999876654 5689999999999864
No 181
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.3e-28 Score=248.36 Aligned_cols=208 Identities=19% Similarity=0.243 Sum_probs=160.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|...+-+-||.+-+ +|+ .-+.+|+|+.+ .||+|.-.|-+ ..+.+++..++.++.+|+.||++||..+||
T Consensus 234 nEk~iL~kV~s~FiVslaY-Afe---Tkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iV 309 (591)
T KOG0986|consen 234 NEKQILEKVSSPFIVSLAY-AFE---TKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIV 309 (591)
T ss_pred HHHHHHHHhccCcEEEEee-eec---CCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhccee
Confidence 4556788888888888666 552 34578888887 69999988833 345699999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
.|||||+|||++..|+|+|.|.|++.++...+
T Consensus 310 YRDLKPeNILLDd~GhvRISDLGLAvei~~g~------------------------------------------------ 341 (591)
T KOG0986|consen 310 YRDLKPENILLDDHGHVRISDLGLAVEIPEGK------------------------------------------------ 341 (591)
T ss_pred eccCChhheeeccCCCeEeeccceEEecCCCC------------------------------------------------
Confidence 99999999999999999999999985432110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
|. ...+||..|||||++.+..|+++.|.|||||+|||
T Consensus 342 -----------------------------------------~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYe 378 (591)
T KOG0986|consen 342 -----------------------------------------PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYE 378 (591)
T ss_pred -----------------------------------------cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHH
Confidence 00 11489999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcc--cCCCchhhhcCc-hhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFP-KEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~~ 330 (712)
|+. ||....+...- ..+.+ ...+..+...++ +..+++..+|..||++|. +++++.+||||+....
T Consensus 379 mi~G~sPFr~~KeKvk~-eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 379 MIAGHSPFRQRKEKVKR-EEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred HHcccCchhhhhhhhhH-HHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 998 66543332111 11111 112333444444 444999999999999997 5789999999998644
No 182
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2.9e-28 Score=271.97 Aligned_cols=210 Identities=20% Similarity=0.276 Sum_probs=151.4
Q ss_pred ccceeeccC-CCCCcccccccccccc--cc-cCceEEEEeeC-CccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENE--AA-IDPFVHAIEWG-DVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~--~~-~~~~~l~~e~~-g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+|+-+++.+ +|+|||.+++..+... .+ ...++|.|||| |++|-++|.+ -...|++.++++||.|+++||.+||.
T Consensus 83 ~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 83 REIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred HHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 444567775 5999999988333222 22 35788888887 5899999943 23349999999999999999999999
Q ss_pred cC--ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 101 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 101 ~g--IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
+. |||||||-+||||+.+|+.||||||.+.-.-... . ..+++
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~---------------~--~~~e~------------------- 206 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSP---------------T--SAQEV------------------- 206 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCC---------------c--cHHHH-------------------
Confidence 87 9999999999999999999999999884210000 0 00000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc---cCCCCCCccch
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASDI 255 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~~~~sDI 255 (712)
..... .+...-|+.|+|||++ .+.+++.++||
T Consensus 207 -----------------------------------~~ve~----------eI~k~TTp~YRsPEMIDlysg~pI~eKsDI 241 (738)
T KOG1989|consen 207 -----------------------------------NYVEE----------EIEKYTTPQYRSPEMIDLYSGLPIGEKSDI 241 (738)
T ss_pred -----------------------------------HHHHH----------HHHhhCCccccChHHHhhhcCCCCcchhHH
Confidence 00000 1113349999999987 56779999999
Q ss_pred HHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 256 wSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|+|||+||-|+. ||...... .+.+..+. |.+...+....+||..||+.+|.+||++.+++.+
T Consensus 242 WALGclLYkLCy~t~PFe~sg~l-----aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 242 WALGCLLYKLCYFTTPFEESGKL-----AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred HHHHHHHHHHHHhCCCcCcCcce-----eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 999999999986 88654221 22232221 2223445566699999999999999999999874
No 183
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.95 E-value=2.3e-27 Score=249.58 Aligned_cols=206 Identities=18% Similarity=0.220 Sum_probs=152.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++||||+.+++ ++.. .....+++++|+.+++|.+++......+++.+++.++.||+.||+|||++||+|+
T Consensus 53 ~e~~~l~~l~h~ni~~~~~-~~~~-~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~ 130 (293)
T cd07843 53 REINILLKLQHPNIVTVKE-VVVG-SNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHR 130 (293)
T ss_pred HHHHHHHhcCCCCEEEEEE-EEEe-cCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 3556788899999999887 3322 2236788899988789999985544468999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++...+....
T Consensus 131 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------- 161 (293)
T cd07843 131 DLKTSNLLLNNRGILKICDFGLAREYGSPLK------------------------------------------------- 161 (293)
T ss_pred cCCHHHEEECCCCcEEEeecCceeeccCCcc-------------------------------------------------
Confidence 9999999999999999999998854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+.. ++.++|||||||++|+|
T Consensus 162 -----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l 200 (293)
T cd07843 162 -----------------------------------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAEL 200 (293)
T ss_pred -----------------------------------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHH
Confidence 000134678899999987654 68999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc---------------------c----CCC----chhhhc--CchhHHHHHHcCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH---------------------R----VLP----PQLLLK--FPKEASFCLWLLHPEPS 311 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~---------------------~----~~~----~~~~~~--~~~~~~li~~~L~~dP~ 311 (712)
++ ||...... .....+.. . ... ..+... .+...++|.+||+.+|+
T Consensus 201 ~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 279 (293)
T cd07843 201 LTKKPLFPGKSEI-DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA 279 (293)
T ss_pred HhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence 99 44332221 11111100 0 000 011111 23345899999999999
Q ss_pred CCCCHHHHhcCcCC
Q 005147 312 GRPKMGELLQSEFL 325 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~ 325 (712)
+|||+.|+|+||||
T Consensus 280 ~R~t~~ell~~~~f 293 (293)
T cd07843 280 KRISAEDALKHPYF 293 (293)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999998
No 184
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.95 E-value=3.5e-27 Score=246.63 Aligned_cols=205 Identities=19% Similarity=0.196 Sum_probs=153.4
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc-Cceec
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 106 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHr 106 (712)
.++..+|||++++++ .+.. ...+++++|+.+++|.+++.. ....+++..++.++.||+.||+|||++ +++||
T Consensus 53 ~~~~~~~~~iv~~~~-~~~~---~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~ 128 (283)
T cd06617 53 SMRSVDCPYTVTFYG-ALFR---EGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHR 128 (283)
T ss_pred HHHHcCCCCeeeeeE-EEec---CCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 356789999999888 4422 345788899988889887732 334589999999999999999999997 99999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||++.......
T Consensus 129 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 158 (283)
T cd06617 129 DVKPSNVLINRNGQVKLCDFGISGYLVDSV-------------------------------------------------- 158 (283)
T ss_pred CCCHHHEEECCCCCEEEeeccccccccccc--------------------------------------------------
Confidence 999999999999999999999874321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC----CCCCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDIwSlGvll 262 (712)
......|+..|+|||.+.+ ..++.++|+|||||++
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l 197 (283)
T cd06617 159 -----------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197 (283)
T ss_pred -----------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHH
Confidence 0001346888999998865 3478999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+|++ ||..................+......+ ....+|+.+||..+|.+|||+.++++||||.....
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 269 (283)
T cd06617 198 IELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLS 269 (283)
T ss_pred HHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence 99999 5543322223333333322222222223 34559999999999999999999999999998754
No 185
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.95 E-value=3.1e-27 Score=248.35 Aligned_cols=202 Identities=15% Similarity=0.140 Sum_probs=156.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++||||+.+++ .+. ....+++++|+. |++|.+++.+. ..+++..+..++.||+.||.|||++||+|+
T Consensus 51 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~ 125 (290)
T cd05580 51 EKRILQSIRHPFLVNLYG-SFQ---DDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYR 125 (290)
T ss_pred HHHHHHhCCCCCccceee-EEE---cCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 445688899999999888 432 234567777775 99999999555 358999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......
T Consensus 126 dl~p~nili~~~~~~kl~dfg~~~~~~~~--------------------------------------------------- 154 (290)
T cd05580 126 DLKPENLLLDSDGYIKITDFGFAKRVKGR--------------------------------------------------- 154 (290)
T ss_pred CCCHHHEEECCCCCEEEeeCCCccccCCC---------------------------------------------------
Confidence 99999999999999999999987432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....|++.|+|||.+.+..++.++||||||+++|+|+
T Consensus 155 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 192 (290)
T cd05580 155 ------------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEML 192 (290)
T ss_pred ------------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHH
Confidence 00135788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+ ||..... ......+..... +......+...+++.+||..+|.+|| +++++++||||....
T Consensus 193 ~g~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 193 AGYPPFFDDNP-IQIYEKILEGKV-RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred hCCCCCCCCCH-HHHHHHHhcCCc-cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 9 5544332 222333322221 11112235556999999999999999 899999999997754
No 186
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.94 E-value=2.6e-27 Score=245.75 Aligned_cols=205 Identities=19% Similarity=0.195 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCC--ChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l--~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.+.|+||+++++ ++.. ...+++++|+ .+++|.+++......+ ++..++.++.||+.||.|||++||
T Consensus 54 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 129 (268)
T cd06624 54 EEIALHSYLKHRNIVQYLG-SDSE---NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI 129 (268)
T ss_pred HHHHHHHhcCCCCeeeeee-eecc---CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE
Confidence 3445678899999999887 4422 2456677766 6899999996543335 888999999999999999999999
Q ss_pred eeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 104 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 104 vHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+||||||+||+++. .+.++++|||.+........
T Consensus 130 ~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 164 (268)
T cd06624 130 VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP--------------------------------------------- 164 (268)
T ss_pred eecCCCHHHEEEcCCCCeEEEecchhheecccCCC---------------------------------------------
Confidence 99999999999975 67899999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGv 260 (712)
......|++.|+|||.+.+.. ++.++|||||||
T Consensus 165 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGv 199 (268)
T cd06624 165 ---------------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGC 199 (268)
T ss_pred ---------------------------------------------ccccCCCCccccChhhhccccccCCchhhhHHHHH
Confidence 000034688999999986654 789999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhc-ccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++|+|++ ||.........+.... ....+.......+...+|+.+||..+|.+|||+.+++.||||
T Consensus 200 vl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 200 TIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 9999998 5543222212221111 111221111223455699999999999999999999999997
No 187
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.94 E-value=1.9e-27 Score=252.74 Aligned_cols=210 Identities=19% Similarity=0.203 Sum_probs=151.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC----CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~----~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++|||++++++ ++.+ .....+++++|+.+++|.+++.. ....+++..++.|+.||+.||+|||++|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 128 (316)
T cd07842 51 REIALLRELKHENVVSLVE-VFLE-HADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW 128 (316)
T ss_pred HHHHHHHhcCCCCccceEE-EEeC-CCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3556788999999999888 4433 33457899999988889887732 2235899999999999999999999999
Q ss_pred ceeccCCCCceeecC----CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 103 IVVHNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 103 IvHrDLkP~NIll~~----~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|+||||||+||+++. .+.+|++|||++.........
T Consensus 129 i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------- 168 (316)
T cd07842 129 VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP---------------------------------------- 168 (316)
T ss_pred EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc----------------------------------------
Confidence 999999999999998 899999999988543211000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 257 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwS 257 (712)
........++.+|+|||.+.+. .++.++||||
T Consensus 169 -----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s 201 (316)
T cd07842 169 -----------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWA 201 (316)
T ss_pred -----------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHH
Confidence 0000113578899999988765 4899999999
Q ss_pred HHHHHHHhhC---CCCCChhhH--------HHHHhh----------------------------cccCCC-chhh-----
Q 005147 258 LGVLLFELFC---PFSTGEEKT--------RTMSSL----------------------------RHRVLP-PQLL----- 292 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~--------~~~~~~----------------------------~~~~~~-~~~~----- 292 (712)
|||++|+|++ ||....... ..+..+ ....++ ....
T Consensus 202 lG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (316)
T cd07842 202 IGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEK 281 (316)
T ss_pred HHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHh
Confidence 9999999998 454322111 000000 000011 0000
Q ss_pred --hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 293 --LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 293 --~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
...+...+++.+||+.||++|||+.++++||||
T Consensus 282 ~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 282 HKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred ccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 122345589999999999999999999999998
No 188
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94 E-value=4.3e-27 Score=245.87 Aligned_cols=205 Identities=18% Similarity=0.183 Sum_probs=152.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|+.++|||++.+++ .+.. ...+++++|+ .+++|..+. .+++..+..++.||+.||+|||+.||+|+
T Consensus 49 E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 119 (279)
T cd06619 49 ELEILYKCDSPYIIGFYG-AFFV---ENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHR 119 (279)
T ss_pred HHHHHHhCCCCCeeeEEE-EEEE---CCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeC
Confidence 445688899999999888 4432 2345677776 588886542 37888999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++......
T Consensus 120 dlkp~Nill~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 148 (279)
T cd06619 120 DVKPSNMLVNTRGQVKLCDFGVSTQLVNS--------------------------------------------------- 148 (279)
T ss_pred CCCHHHEEECCCCCEEEeeCCcceecccc---------------------------------------------------
Confidence 99999999999999999999987432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|+..|+|||.+.+..++.++|||||||++|+|+
T Consensus 149 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~ 187 (279)
T cd06619 149 -----------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELA 187 (279)
T ss_pred -----------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHH
Confidence 000146789999999999888999999999999999999
Q ss_pred C---CCCCChhh------HHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchH
Q 005147 267 C---PFSTGEEK------TRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 267 ~---pf~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
+ ||...... ......+.....+.... ...+...+|+.+||+.+|.+||+++++++||||........
T Consensus 188 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 188 LGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred hCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 8 55321110 11111111111111111 12345669999999999999999999999999987755433
No 189
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=2.1e-27 Score=249.55 Aligned_cols=205 Identities=16% Similarity=0.274 Sum_probs=151.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++|+||+++++ ++. ....+++++|+.+++|.+++......+++..++.++.||+.||.|||++||+||
T Consensus 52 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~ 127 (291)
T cd07844 52 REASLLKDLKHANIVTLHD-IIH---TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHR 127 (291)
T ss_pred HHHHHHhhCCCcceeeEEE-EEe---cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 4666788999999999887 443 335788899998789999996555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||+++.......
T Consensus 128 dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------- 158 (291)
T cd07844 128 DLKPQNLLISERGELKLADFGLARAKSVPSK------------------------------------------------- 158 (291)
T ss_pred cCCHHHEEEcCCCCEEECccccccccCCCCc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+. .++.++|||||||++|+|
T Consensus 159 -----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l 197 (291)
T cd07844 159 -----------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEM 197 (291)
T ss_pred -----------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHH
Confidence 00002357789999998764 489999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc---c---------------------CC-Cchhh----hcC--chhHHHHHHcCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH---R---------------------VL-PPQLL----LKF--PKEASFCLWLLHPEPS 311 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~---~---------------------~~-~~~~~----~~~--~~~~~li~~~L~~dP~ 311 (712)
++ ||............+.. . .. +.... ... +...+++.+||+.+|.
T Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~ 277 (291)
T cd07844 198 ATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPK 277 (291)
T ss_pred HhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcc
Confidence 98 45433211111111100 0 00 00000 111 4445999999999999
Q ss_pred CCCCHHHHhcCcCC
Q 005147 312 GRPKMGELLQSEFL 325 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~ 325 (712)
+|||+.++|+||||
T Consensus 278 ~Rps~~e~l~~~~f 291 (291)
T cd07844 278 KRISAAEAMKHPYF 291 (291)
T ss_pred cccCHHHHhcCCCC
Confidence 99999999999998
No 190
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.94 E-value=2.2e-27 Score=255.72 Aligned_cols=209 Identities=15% Similarity=0.234 Sum_probs=155.9
Q ss_pred ccceeeccCCCCCccccccccccccccc---CceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~---~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.+..+|..++||||+++++ ++...... ..+++++++.|++|.+++.. ..+++..++.++.||+.||+|||+.||
T Consensus 63 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi 139 (343)
T cd07880 63 RELRLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGI 139 (343)
T ss_pred HHHHHHHhcCCCCccceee-eecCCccccccceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 4556788999999999888 45433222 35688999999999998854 348999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||++......
T Consensus 140 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07880 140 IHRDLKPGNLAVNEDCELKILDFGLARQTDSE------------------------------------------------ 171 (343)
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccccccccC------------------------------------------------
Confidence 99999999999999999999999987432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
.....++++|+|||.+.+. .++.++|+|||||++
T Consensus 172 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll 206 (343)
T cd07880 172 ---------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence 0013468899999998763 488999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC-------------------------CCchh----hhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV-------------------------LPPQL----LLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~-------------------------~~~~~----~~~~~~~~~li~~~L~~dP 310 (712)
|+|++ ||................. .+..+ ....+...++|.+||..||
T Consensus 207 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP 286 (343)
T cd07880 207 AEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDA 286 (343)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCCh
Confidence 99998 5543332211111111000 00000 1123345599999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCc
Q 005147 311 SGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
.+|||+.+++.||||......
T Consensus 287 ~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 287 ESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred hhCCCHHHHhcCccHhhhcCc
Confidence 999999999999999876553
No 191
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=3.5e-27 Score=247.92 Aligned_cols=205 Identities=18% Similarity=0.259 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++|+||+.+++ ++. .....++++++.+++|.+++......+++.+++.++.||+.||.|||+.||+|+
T Consensus 52 ~e~~~l~~l~h~ni~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 127 (291)
T cd07870 52 REASLLKGLKHANIVLLHD-IIH---TKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHR 127 (291)
T ss_pred HHHHHHHhcCCCCEeEEEE-EEe---cCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4556788899999999877 442 234678888887888988885444457888999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||+++.......
T Consensus 128 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~------------------------------------------------- 158 (291)
T cd07870 128 DLKPQNLLISYLGELKLADFGLARAKSIPSQ------------------------------------------------- 158 (291)
T ss_pred CCChHHEEEcCCCcEEEeccccccccCCCCC-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+. .++.++|||||||++|+|
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l 197 (291)
T cd07870 159 -----------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEM 197 (291)
T ss_pred -----------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHH
Confidence 00003468899999998764 478899999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc-------------------------cCCCchh------hhcCchhHHHHHHcCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH-------------------------RVLPPQL------LLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~-------------------------~~~~~~~------~~~~~~~~~li~~~L~~dP~ 311 (712)
++ ||............... ...+... ....+...+++.+||..||+
T Consensus 198 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~ 277 (291)
T cd07870 198 LQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPK 277 (291)
T ss_pred HhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcc
Confidence 99 55433322222111100 0000000 01123455899999999999
Q ss_pred CCCCHHHHhcCcCC
Q 005147 312 GRPKMGELLQSEFL 325 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~ 325 (712)
+|||+.+++.||||
T Consensus 278 ~R~t~~~~l~h~~~ 291 (291)
T cd07870 278 DRISAQDALLHPYF 291 (291)
T ss_pred cCcCHHHHhcCCCC
Confidence 99999999999997
No 192
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.94 E-value=8e-27 Score=247.56 Aligned_cols=207 Identities=16% Similarity=0.141 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++|+|++++++ ++.. ...+++++|+..++|.+++......+++.+++.++.||+.||.|||++|++||
T Consensus 64 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~ 139 (308)
T cd06634 64 KEVRFLQKLRHPNTIQYRG-CYLR---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139 (308)
T ss_pred HHHHHHHhCCCCCcccEEE-EEEc---CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 3455788899999999887 4432 34677888887788988885545568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......
T Consensus 140 dl~p~nil~~~~~~~kl~dfg~~~~~~~~--------------------------------------------------- 168 (308)
T cd06634 140 DVKAGNILLSEPGLVKLGDFGSASIMAPA--------------------------------------------------- 168 (308)
T ss_pred CCCHHhEEECCCCcEEECCcccceeecCc---------------------------------------------------
Confidence 99999999999999999999977321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
....|+..|+|||.+. ...++.++|||||||++|
T Consensus 169 -------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 205 (308)
T cd06634 169 -------------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205 (308)
T ss_pred -------------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHH
Confidence 0134688899999974 345888999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
+|++ ||.......... .+.....+....... ....+||.+||..+|.+||++.++++|||+.....+.
T Consensus 206 el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~ 277 (308)
T cd06634 206 ELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 277 (308)
T ss_pred HHHcCCCCCccccHHHHHH-HHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChh
Confidence 9998 554433222222 222222222222223 3455999999999999999999999999999865543
No 193
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.94 E-value=2.8e-27 Score=249.69 Aligned_cols=207 Identities=18% Similarity=0.290 Sum_probs=155.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++|||++.+++ .+.. ...+++++|+ .+++|..++.. ..+++..++.++.||+.||.|||++||+|
T Consensus 67 ~e~~~l~~l~hp~i~~~~~-~~~~---~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH 140 (297)
T cd06659 67 NEVVIMRDYQHQNVVEMYK-SYLV---GEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIH 140 (297)
T ss_pred HHHHHHHhCCCCchhhhhh-heee---CCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3456788899999999888 4422 2345666665 68899997744 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 141 ~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------ 172 (297)
T cd06659 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------------------------------------------------ 172 (297)
T ss_pred CCCCHHHeEEccCCcEEEeechhHhhcccccc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 173 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 210 (297)
T cd06659 173 ------------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEM 210 (297)
T ss_pred ------------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00014578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCC--chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... ..+..+.....+ .......+...+++.+||..+|.+||++.++++||||.....
T Consensus 211 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 211 VDGEPPYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HhCCCCCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 98 55443322 233333222111 111122344569999999999999999999999999987643
No 194
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94 E-value=3.6e-27 Score=244.86 Aligned_cols=194 Identities=21% Similarity=0.270 Sum_probs=147.8
Q ss_pred CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
.+|||++++++ .+.. ...+++++|+ .|++|.+++.... .+++.+++.++.||+.||.|||+.||+||||||+||
T Consensus 66 ~~h~~iv~~~~-~~~~---~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~ni 140 (267)
T PHA03390 66 KDNPNFIKLYY-SVTT---LKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENV 140 (267)
T ss_pred hcCCCEEEEEE-EEec---CCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHE
Confidence 37999999887 4322 2357777777 6899999995544 599999999999999999999999999999999999
Q ss_pred eecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCc
Q 005147 114 VMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (712)
Q Consensus 114 ll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~ 192 (712)
+++.++ .++++|||.+...+..
T Consensus 141 l~~~~~~~~~l~dfg~~~~~~~~--------------------------------------------------------- 163 (267)
T PHA03390 141 LYDRAKDRIYLCDYGLCKIIGTP--------------------------------------------------------- 163 (267)
T ss_pred EEeCCCCeEEEecCccceecCCC---------------------------------------------------------
Confidence 999888 9999999987432111
Q ss_pred cccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CC
Q 005147 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (712)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf 269 (712)
....|+..|+|||.+.+..++.++|||||||++|+|++ ||
T Consensus 164 -------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~ 206 (267)
T PHA03390 164 -------------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPF 206 (267)
T ss_pred -------------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 00246888999999998889999999999999999998 66
Q ss_pred CCChhhHHHHHhhcc--cCCCchhhhcCchhHHHHHHcCCCCCCCCCC-HHHHhcCcCCCC
Q 005147 270 STGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNE 327 (712)
Q Consensus 270 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~eiL~hp~~~~ 327 (712)
............+.. ....+......+...+||.+||+.+|.+||+ ++++|+||||..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 207 KEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred CCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 432221111111111 1111222234456669999999999999996 699999999963
No 195
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.94 E-value=6e-27 Score=248.27 Aligned_cols=220 Identities=16% Similarity=0.162 Sum_probs=154.7
Q ss_pred ccceeeccCCCCCcccccccccccccc----cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAA----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~----~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++||||+++++.++..... ...+++++++.+.+|..++......+++.+++.++.||++||+|||++|
T Consensus 56 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~ 135 (311)
T cd07866 56 REIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH 135 (311)
T ss_pred HHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 355678889999999988844432211 2357889999888899888665556999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||||+||+++.++.++++|||++........... ..
T Consensus 136 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-----------------------------~~----------- 175 (311)
T cd07866 136 ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPK-----------------------------GG----------- 175 (311)
T ss_pred eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccc-----------------------------cC-----------
Confidence 99999999999999999999999998854322100000 00
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvl 261 (712)
............+++.|+|||.+.+. .++.++|||||||+
T Consensus 176 ---------------------------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i 216 (311)
T cd07866 176 ---------------------------------------GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV 216 (311)
T ss_pred ---------------------------------------CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH
Confidence 00000001124678999999988664 48999999999999
Q ss_pred HHHhhC---CCCCChhhHHHH--Hhhccc----------------------CCCchh----hhcCchhHHHHHHcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTM--SSLRHR----------------------VLPPQL----LLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~--~~~~~~----------------------~~~~~~----~~~~~~~~~li~~~L~~dP 310 (712)
+|||++ ||.......... ...... ..++.. ....+...+|+.+||..+|
T Consensus 217 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 296 (311)
T cd07866 217 FAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDP 296 (311)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCc
Confidence 999999 333222211111 110000 001111 1122345599999999999
Q ss_pred CCCCCHHHHhcCcCC
Q 005147 311 SGRPKMGELLQSEFL 325 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~ 325 (712)
.+|||+.+++.||||
T Consensus 297 ~~R~t~~ell~~~~f 311 (311)
T cd07866 297 YKRLTASDALEHPYF 311 (311)
T ss_pred ccCcCHHHHhcCCCC
Confidence 999999999999998
No 196
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=2.6e-27 Score=255.23 Aligned_cols=208 Identities=17% Similarity=0.222 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++|||++.+++ ++.... ....+++++++.|++|.+++.. ..+++.+++.++.||+.||+|||+.||
T Consensus 63 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi 139 (343)
T cd07851 63 RELRLLKHMDHENVIGLLD-VFTPASSLEDFQDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGI 139 (343)
T ss_pred HHHHHHHhccCCCHHHHHH-HhhccccccccccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3556788899999999877 332221 2235899999999999999854 248999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||.+......
T Consensus 140 ~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07851 140 IHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------------------------------------ 171 (343)
T ss_pred ecCCCCHHHeEECCCCCEEEcccccccccccc------------------------------------------------
Confidence 99999999999999999999999988432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
.....++.+|+|||.+.+. .++.++|||||||++
T Consensus 172 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l 206 (343)
T cd07851 172 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHH
Confidence 0013568899999998653 588999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhccc--CCC----------------------------chhhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHR--VLP----------------------------PQLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~--~~~----------------------------~~~~~~~~~~~~li~~~L~~d 309 (712)
|+|++ ||....... ....+... ..+ .......+...+|+.+||..+
T Consensus 207 ~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~ 285 (343)
T cd07851 207 AELLTGKTLFPGSDHID-QLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD 285 (343)
T ss_pred HHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC
Confidence 99999 554333221 11111110 000 001112345559999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCc
Q 005147 310 PSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|.+|||+.+|++||||......
T Consensus 286 P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 286 PDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hhhCCCHHHHhcCCCccccCCC
Confidence 9999999999999999876554
No 197
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.94 E-value=4.1e-27 Score=246.64 Aligned_cols=205 Identities=15% Similarity=0.148 Sum_probs=148.1
Q ss_pred eeeccC-CCCCcccccccccccc-cccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 30 VELTHG-DHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 30 ~~l~~~-~H~ni~~~~~~~~~~~-~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+ +|||++++++.++... .....+++++|+ .|++|.+++. .....+++..+..++.||+.||.|||++||
T Consensus 66 ~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 145 (286)
T cd06638 66 NILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT 145 (286)
T ss_pred HHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCc
Confidence 345566 7999999888333222 233456777776 6999999873 233458899999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||++........
T Consensus 146 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 179 (286)
T cd06638 146 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---------------------------------------------- 179 (286)
T ss_pred cccCCCHHhEEECCCCCEEEccCCceeecccCCC----------------------------------------------
Confidence 9999999999999999999999998743211000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRL 258 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSl 258 (712)
......|++.|+|||.+.. ..++.++|||||
T Consensus 180 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 215 (286)
T cd06638 180 --------------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL 215 (286)
T ss_pred --------------------------------------------ccccccCCCcccChhhhchhhhccccccchhhhhhH
Confidence 0001357899999999853 347899999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCch-hhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||++|||++ ||........ .........+.. .... .....+++.+||+.+|.+|||+.++++|+||
T Consensus 216 Gvi~~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 216 GITAIELGDGDPPLADLHPMRA-LFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HHHHHHHhcCCCCCCCCchhHH-HhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 999999998 5544332222 222222211111 1111 2345699999999999999999999999997
No 198
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.94 E-value=3.1e-27 Score=254.49 Aligned_cols=207 Identities=15% Similarity=0.258 Sum_probs=154.8
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..++||||+++++ ++.... ....+++++++.+.+|..++. ..+++.++..++.||+.||+|||++||
T Consensus 63 ~e~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i 138 (342)
T cd07879 63 RELTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGI 138 (342)
T ss_pred HHHHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 4566788899999999888 443322 224578999998888888762 248999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||+++.....
T Consensus 139 ~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~------------------------------------------------ 170 (342)
T cd07879 139 IHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------------------------------------ 170 (342)
T ss_pred ccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC------------------------------------------------
Confidence 99999999999999999999999987432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
.....++++|+|||.+.+. .++.++|||||||++
T Consensus 171 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil 205 (342)
T cd07879 171 ---------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIM 205 (342)
T ss_pred ---------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHH
Confidence 0013568899999998764 589999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc-------------------------cCCC-ch----hhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH-------------------------RVLP-PQ----LLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~-------------------------~~~~-~~----~~~~~~~~~~li~~~L~~d 309 (712)
|||++ ||....... .+..+.. ...+ .. .....+...+||.+||+.|
T Consensus 206 ~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 284 (342)
T cd07879 206 AEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD 284 (342)
T ss_pred HHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCC
Confidence 99998 555432211 1111110 0000 00 1122344569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCc
Q 005147 310 PSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|.+||++.+++.||||......
T Consensus 285 P~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 285 VDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hhhCcCHHHHhcCcchhhcccc
Confidence 9999999999999999987653
No 199
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.94 E-value=3.3e-27 Score=246.94 Aligned_cols=202 Identities=19% Similarity=0.227 Sum_probs=152.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQI 91 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi 91 (712)
+..++..+.||||+++++ ++.. ...+++++|+ .+++|.+++.... ..+++.+++.++.||
T Consensus 58 ei~~l~~l~h~~i~~~~~-~~~~---~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 133 (283)
T cd05048 58 EAELMSDLQHPNIVCLLG-VCTK---EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQI 133 (283)
T ss_pred HHHHHHhcCCcccceEEE-EEcC---CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHH
Confidence 445688899999999887 4432 3456777776 6899999994321 347889999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||.|||++||+|+||||+||+++.++.++++|||++.........
T Consensus 134 ~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~--------------------------------- 180 (283)
T cd05048 134 AAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYY--------------------------------- 180 (283)
T ss_pred HHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccc---------------------------------
Confidence 99999999999999999999999999999999999987432111000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
. ......+++.|+|||.+.+..++.
T Consensus 181 -----------------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~ 205 (283)
T cd05048 181 -----------------------------------R--------------------VQSKSLLPVRWMPPEAILYGKFTT 205 (283)
T ss_pred -----------------------------------c--------------------ccCCCcccccccCHHHhccCcCch
Confidence 0 000134578899999998888999
Q ss_pred ccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 252 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++|||||||++|||++ ||..... ...+..+.....++......+...+|+.+||..+|.+||++.+|+++
T Consensus 206 ~sDv~slG~il~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 206 ESDIWSFGVVLWEIFSYGLQPYYGFSN-QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999996 5554333 23444444444443333334556699999999999999999999874
No 200
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.94 E-value=4.2e-27 Score=243.88 Aligned_cols=209 Identities=16% Similarity=0.228 Sum_probs=153.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+...|+.++|+|++++++ ++.+ ...+++++++ .|++|.+++.+.. .+++..+..++.||+.||.|||++||+|
T Consensus 52 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~~i~H 126 (268)
T cd06630 52 KEIRLMARLNHPHIIRMLG-ATCE---DSHFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQIIH 126 (268)
T ss_pred HHHHHHHHcCCCceehhhc-eecc---CCeEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4556788899999999888 4422 2345566665 7899999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 106 HNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 106 rDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
+||+|+||+++.++ .++++|||.+.......... .+
T Consensus 127 ~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------~~-------------- 163 (268)
T cd06630 127 RDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------------------------GE-------------- 163 (268)
T ss_pred CCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------------------------Cc--------------
Confidence 99999999998776 58999999875432210000 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 164 -------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~ 200 (268)
T cd06630 164 -------------------------------------------FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIE 200 (268)
T ss_pred -------------------------------------------cccccccccceeCHhHhccCCCCcccchHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred hhC---CCCCChh--hHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 265 LFC---PFSTGEE--KTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 265 Ll~---pf~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
|++ ||..... ..............+... ...+...+++.+||..+|.+|||+.++++||||.
T Consensus 201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 201 MATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 998 5542221 112222222222222222 2345566899999999999999999999999985
No 201
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.94 E-value=4.4e-27 Score=252.68 Aligned_cols=215 Identities=16% Similarity=0.191 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..++..++|+|++.+++ ++.... ....+++++++.+++|.+++.. ..+++..++.++.||+.||.|||+.||+
T Consensus 52 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~iv 128 (336)
T cd07849 52 REIKILRRFKHENIIGILD-IIRPPSFESFNDVYIVQELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVL 128 (336)
T ss_pred HHHHHHHhCCCCCcCchhh-eeecccccccceEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4566788899999999887 443222 2346788999988899988843 2489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++......... .
T Consensus 129 H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------------- 163 (336)
T cd07849 129 HRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH--------------------------------T------------- 163 (336)
T ss_pred ccCCCHHHEEECCCCCEEECcccceeeccccccc--------------------------------c-------------
Confidence 9999999999999999999999987443211000 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~ 263 (712)
. ......|++.|+|||.+.+ ..++.++|||||||++|
T Consensus 164 --------------------------------------~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~ 201 (336)
T cd07849 164 --------------------------------------G----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILA 201 (336)
T ss_pred --------------------------------------C----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHH
Confidence 0 0011467899999998755 45899999999999999
Q ss_pred HhhC---CCCCChhhH--HHHHhhcccC----------------------CCc-----hhhhcCchhHHHHHHcCCCCCC
Q 005147 264 ELFC---PFSTGEEKT--RTMSSLRHRV----------------------LPP-----QLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 264 eLl~---pf~~~~~~~--~~~~~~~~~~----------------------~~~-----~~~~~~~~~~~li~~~L~~dP~ 311 (712)
+|++ ||....... ..+..+.... .+. ......+...+|+.+||+.+|+
T Consensus 202 el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 281 (336)
T cd07849 202 EMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPH 281 (336)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChh
Confidence 9999 454322111 0010000000 000 0112234556999999999999
Q ss_pred CCCCHHHHhcCcCCCCCcCc
Q 005147 312 GRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+|||+.++++||||......
T Consensus 282 ~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 282 KRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hCcCHHHHhcCccccccCCC
Confidence 99999999999999987654
No 202
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.94 E-value=3.3e-27 Score=251.39 Aligned_cols=203 Identities=15% Similarity=0.115 Sum_probs=150.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++||||+++++ .+.. ....++++++.+++|.+++......++...++.++.||+.||+|||++||+||
T Consensus 58 ~e~~~l~~l~h~niv~~~g-~~~~---~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~ 133 (316)
T cd05108 58 DEAYVMASVDNPHVCRLLG-ICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHR 133 (316)
T ss_pred HHHHHHHhCCCCCCCeEEE-EEcC---CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 3456788899999999887 4432 23445556668999999997655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||+++........ +
T Consensus 134 dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~--------------- 166 (316)
T cd05108 134 DLAARNVLVKTPQHVKITDFGLAKLLGADEKE--------------------------------Y--------------- 166 (316)
T ss_pred ccchhheEecCCCcEEEccccccccccCCCcc--------------------------------e---------------
Confidence 99999999999999999999988543221000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 167 -----------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~ 205 (316)
T cd05108 167 -----------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 205 (316)
T ss_pred -----------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHH
Confidence 000022356799999999888999999999999999998
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||.... .......+.....++..........+++.+||..+|.+||++.+++.+
T Consensus 206 t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 206 TFGSKPYDGIP-ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred cCCCCCCCCCC-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6 443322 222223333333333323334556699999999999999999999873
No 203
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.94 E-value=2.7e-27 Score=245.92 Aligned_cols=206 Identities=16% Similarity=0.166 Sum_probs=149.4
Q ss_pred cceeeccC-CCCCccccccccccccc---ccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhh
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~---~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
+..++..+ +|+|++++++ .+.... ....+++++++ .+++|.+++... +..+++..++.++.||+.||.|||
T Consensus 52 e~~~l~~~~~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH 130 (275)
T cd06608 52 EYNILRKYSNHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH 130 (275)
T ss_pred HHHHHHHhcCCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 33456665 7999999888 443322 24456777777 588999988432 355899999999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
++||+|+||+|+||+++.++.++++|||.+........
T Consensus 131 ~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------ 168 (275)
T cd06608 131 ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLG------------------------------------------ 168 (275)
T ss_pred cCCcccCCCCHHHEEEccCCeEEECCCccceecccchh------------------------------------------
Confidence 99999999999999999999999999998743211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-----CCCCccc
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASD 254 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sD 254 (712)
......|+..|+|||.+... .++.++|
T Consensus 169 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D 200 (275)
T cd06608 169 ------------------------------------------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSD 200 (275)
T ss_pred ------------------------------------------------hhcCccccccccCHhHhcccccccCCcccccc
Confidence 00013578899999987542 3788999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchh-hh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||||||++|+|++ ||.......... .+.....+... .. ......+|+.+||..||++|||+.++++|||+
T Consensus 201 v~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 201 VWSLGITAIELADGKPPLCDMHPMRALF-KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHhHHHHHHHHhCCCCccccchHHHHH-HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999999999998 554433222222 22222221111 11 22344599999999999999999999999996
No 204
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.94 E-value=4e-27 Score=244.26 Aligned_cols=201 Identities=13% Similarity=0.143 Sum_probs=150.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...+..++|||++++++ ++. ....++++||+ .+++|.+++......+++.+++.++.||+.||+|||++||+|
T Consensus 55 ~e~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH 130 (266)
T cd05064 55 AEALTLGQFDHSNIVRLEG-VIT---RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVH 130 (266)
T ss_pred HHHHHHhcCCCCCcCeEEE-EEe---cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4556788899999999887 442 23457777777 588999999665556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||...........
T Consensus 131 ~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 163 (266)
T cd05064 131 KGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY----------------------------------------------- 163 (266)
T ss_pred ccccHhhEEEcCCCcEEECCCcccccccccchh-----------------------------------------------
Confidence 999999999999999999999876321100000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 164 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 201 (266)
T cd05064 164 ------------------------------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEV 201 (266)
T ss_pred ------------------------------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHH
Confidence 00002346789999999888899999999999999997
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++..........+++.+||..+|.+||++.+|++
T Consensus 202 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 202 MSYGERPYWDMSGQ-DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred hcCCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 75 66543332 233333333333322223344558999999999999999999876
No 205
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.94 E-value=5e-27 Score=241.43 Aligned_cols=203 Identities=20% Similarity=0.278 Sum_probs=153.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|+.++|||++.+++.+. ....+++++|+ .|++|.+++... ...+++..++.++.|++.+|.|||++||+
T Consensus 48 ~e~~~l~~~~~~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~ 123 (256)
T cd08220 48 NECQVLKLLSHPNIIEYYENFL----EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123 (256)
T ss_pred HHHHHHhhCCCCchhheeeeEe----cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3455788899999999887332 23456777776 689999999543 34589999999999999999999999999
Q ss_pred eccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|+||+|+||+++.++ .++++|||.+...+...
T Consensus 124 h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd08220 124 HRDLKTQNILLDKHKMVVKIGDFGISKILSSKS----------------------------------------------- 156 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-----------------------------------------------
Confidence 999999999998554 57999999874332110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......|+..|+|||.+.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 192 (256)
T cd08220 157 --------------------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLY 192 (256)
T ss_pred --------------------------------------------cccccccCCcccCchhccCCCCCcccchHHHHHHHH
Confidence 000135688999999998888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
+|++ ||............. ....++......+...+++.+||..+|.+|||+.++++||||
T Consensus 193 ~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 193 ELASLKRAFEAANLPALVLKIM-SGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHhCCCCcccCchHHHHHHHH-hcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9998 665444333333322 222222222234556699999999999999999999999997
No 206
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.94 E-value=3.5e-27 Score=250.26 Aligned_cols=204 Identities=20% Similarity=0.199 Sum_probs=152.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
++..++..++||||+++++ .+.. ...+++++|| .|++|.+++.+. ..+++..+..++.||+.||.|||+ +||+
T Consensus 48 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~ 122 (308)
T cd06615 48 RELKVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIM 122 (308)
T ss_pred HHHHHHHhCCCCCCCeEEE-EEee---CCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEE
Confidence 4555788899999999888 4422 3456777777 689999999654 348999999999999999999998 6999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++......
T Consensus 123 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------- 153 (308)
T cd06615 123 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------- 153 (308)
T ss_pred ECCCChHHEEEecCCcEEEccCCCccccccc-------------------------------------------------
Confidence 9999999999999999999999987321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 154 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~ 190 (308)
T cd06615 154 -------------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVE 190 (308)
T ss_pred -------------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHH
Confidence 0001457889999999988889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhccc-----------------------------------CCCchhh--hcCchhHHHHHH
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHR-----------------------------------VLPPQLL--LKFPKEASFCLW 304 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~--~~~~~~~~li~~ 304 (712)
|++ ||...... .....+... ..++..+ ...+...+|+.+
T Consensus 191 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 269 (308)
T cd06615 191 MAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDK 269 (308)
T ss_pred HHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHH
Confidence 999 55432211 111111000 0000000 012345699999
Q ss_pred cCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 305 LLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 305 ~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
||..+|++|||+.++++||||...
T Consensus 270 ~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 270 CLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HccCChhhCcCHHHHhcChhhhhc
Confidence 999999999999999999999764
No 207
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.94 E-value=4e-27 Score=252.97 Aligned_cols=204 Identities=19% Similarity=0.227 Sum_probs=148.3
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-----------------------------
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------------------------- 76 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----------------------------- 76 (712)
+..++.++ +|+||+.+++ ++. .....++++++| .+++|.++|....
T Consensus 60 E~~~~~~l~~h~niv~~~~-~~~--~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (337)
T cd05054 60 ELKILIHIGHHLNVVNLLG-ACT--KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSV 136 (337)
T ss_pred HHHHHHhhccCcchhheee-eEe--cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccC
Confidence 44456666 8999999888 442 223456666666 6999999884311
Q ss_pred -------------------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEe
Q 005147 77 -------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 125 (712)
Q Consensus 77 -------------------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~d 125 (712)
..+++..+..++.||+.||.|||++||+||||||+||+++.++.++++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~D 216 (337)
T cd05054 137 SSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICD 216 (337)
T ss_pred CccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEec
Confidence 2478899999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccc
Q 005147 126 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQE 205 (712)
Q Consensus 126 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (712)
||++......... +
T Consensus 217 fG~a~~~~~~~~~--------------------------------~---------------------------------- 230 (337)
T cd05054 217 FGLARDIYKDPDY--------------------------------V---------------------------------- 230 (337)
T ss_pred cccchhcccCcch--------------------------------h----------------------------------
Confidence 9988543111000 0
Q ss_pred ccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHh
Q 005147 206 HKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSS 281 (712)
Q Consensus 206 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~ 281 (712)
......++..|+|||++.+..++.++|||||||++|||++ ||............
T Consensus 231 ----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~ 288 (337)
T cd05054 231 ----------------------RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRR 288 (337)
T ss_pred ----------------------hccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHH
Confidence 0001345678999999999999999999999999999986 55432222222233
Q ss_pred hcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 282 LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.....+.......+...+++.+||+.+|++||++.++++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 289 LKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33333322222334556699999999999999999999884
No 208
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=7e-27 Score=244.94 Aligned_cols=209 Identities=14% Similarity=0.142 Sum_probs=156.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC--CCCCChhHHHHHHHHHHHHHHHhhh-cC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS-QG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~--~~~l~~~~~~~i~~qil~~l~~lHs-~g 102 (712)
++..+|..++|+|++++++ .+.. ...+++++|+ .|++|.+++... ...+++..++.++.||+.||.|||+ .|
T Consensus 48 ~e~~~l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~ 123 (286)
T cd06622 48 MELDILHKAVSPYIVDFYG-AFFI---EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123 (286)
T ss_pred HHHHHHHhcCCCcHHhhhh-heec---CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3555788899999999888 4432 2456677776 688999988543 2358999999999999999999997 59
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||||+||+++.++.++++|||.+.......
T Consensus 124 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------------------- 157 (286)
T cd06622 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL---------------------------------------------- 157 (286)
T ss_pred EeeCCCCHHHEEECCCCCEEEeecCCcccccCCc----------------------------------------------
Confidence 9999999999999999999999999874321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC------CCCccchH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASDIY 256 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~~~~sDIw 256 (712)
.....|++.|+|||.+.+.. ++.++|||
T Consensus 158 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diw 191 (286)
T cd06622 158 ----------------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVW 191 (286)
T ss_pred ----------------------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccchH
Confidence 00034678899999985543 58899999
Q ss_pred HHHHHHHHhhC---CCCCChhh--HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 257 RLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||||++|+|++ ||...... ...+..+.....+.......+...+|+.+||..+|.+||++.++++||||......
T Consensus 192 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 192 SLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred hHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 99999999998 55433221 12222333333333333334556699999999999999999999999999876543
No 209
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-27 Score=269.17 Aligned_cols=209 Identities=19% Similarity=0.257 Sum_probs=162.2
Q ss_pred cceeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 21 ~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
+-||++|+ +|...+-+=|+.+++ +|.|+ ..+|+||+| +||+|-.+|.+.+ .+|+.-++.|+..|+.||+-+|
T Consensus 120 A~F~EERD--imv~~ns~Wiv~Lhy-AFQD~---~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH 192 (1317)
T KOG0612|consen 120 ACFREERD--IMVFGNSEWIVQLHY-AFQDE---RYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH 192 (1317)
T ss_pred HHHHHHhH--HHHcCCcHHHHHHHH-HhcCc---cceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH
Confidence 44788888 777778888888777 66443 345555555 8999999997777 6999999999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+.|+|||||||+||||+..|+||++|||.|-....+ | .
T Consensus 193 ~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d----G--------------------------------~------ 230 (1317)
T KOG0612|consen 193 SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD----G--------------------------------T------ 230 (1317)
T ss_pred hccceeccCCcceeEecccCcEeeccchhHHhcCCC----C--------------------------------c------
Confidence 999999999999999999999999999999443322 0 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc----C-CCCCCccc
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA----G-APVSCASD 254 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~~~~sD 254 (712)
......+|||-|.|||++. + +.|+..+|
T Consensus 231 -----------------------------------------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecD 263 (1317)
T KOG0612|consen 231 -----------------------------------------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECD 263 (1317)
T ss_pred -----------------------------------------------EEeccccCCCCccCHHHHHhhcCCccccCCccc
Confidence 0122368999999999994 2 45999999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhc-c---cCCCchhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcC
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLR-H---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEF 324 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~ 324 (712)
+|||||++|||++ ||+...-. ..+..+. + -.+| .....+....+||.+++. +|..|.. ++++..|||
T Consensus 264 wWSlGV~~YEMlyG~TPFYadslv-eTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpF 340 (1317)
T KOG0612|consen 264 WWSLGVFMYEMLYGETPFYADSLV-ETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPF 340 (1317)
T ss_pred hhhhHHHHHHHHcCCCcchHHHHH-HHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence 9999999999997 89865544 3333333 3 2344 333345556699998875 6777886 999999999
Q ss_pred CCCC
Q 005147 325 LNEP 328 (712)
Q Consensus 325 ~~~~ 328 (712)
|.+.
T Consensus 341 F~g~ 344 (1317)
T KOG0612|consen 341 FEGI 344 (1317)
T ss_pred ccCC
Confidence 9774
No 210
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.94 E-value=7e-27 Score=244.30 Aligned_cols=201 Identities=15% Similarity=0.082 Sum_probs=148.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+...++.++||||+++++ ++. ....+++++++.+++|.+++......+++..++.|+.||+.||.|||++|++|||
T Consensus 59 ~~~~l~~l~h~~iv~~~~-~~~---~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d 134 (279)
T cd05111 59 HMLAMGSLDHAYIVRLLG-ICP---GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRN 134 (279)
T ss_pred HHHHHhcCCCCCcceEEE-EEC---CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccc
Confidence 344678899999999888 442 2234555555689999999966555689999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.+|++|||.++........ .
T Consensus 135 lkp~nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~---------------- 166 (279)
T cd05111 135 LAARNILLKSDSIVQIADFGVADLLYPDDKK--------------------------------Y---------------- 166 (279)
T ss_pred cCcceEEEcCCCcEEEcCCccceeccCCCcc--------------------------------c----------------
Confidence 9999999999999999999988533111000 0
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 ----------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t 206 (279)
T cd05111 167 ----------------------------------------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206 (279)
T ss_pred ----------------------------------------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHc
Confidence 0001245678999999988889999999999999999997
Q ss_pred ----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 ----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 ----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||...... .....+.....++...........++.+|+..+|++|||+.++++
T Consensus 207 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 207 YGAEPYAGMRPH-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CCCCCCCCCCHH-HHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 55433222 222222332222222222334558999999999999999999876
No 211
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94 E-value=4.3e-27 Score=242.81 Aligned_cols=203 Identities=17% Similarity=0.195 Sum_probs=152.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||++++++ .+. ....+++++|+ .+++|.+++......+++.++..++.||+.||.|||++||+|
T Consensus 49 ~e~~~l~~~~h~~i~~~~~-~~~---~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h 124 (262)
T cd06613 49 QEISMLKECRHPNIVAYFG-SYL---RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIH 124 (262)
T ss_pred HHHHHHHhCCCCChhceEE-EEE---eCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 3445788899999999887 332 23457788887 578999998665456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.......
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~------------------------------------------------- 155 (262)
T cd06613 125 RDIKGANILLTEDGDVKLADFGVSAQLTATI------------------------------------------------- 155 (262)
T ss_pred cCCChhhEEECCCCCEEECccccchhhhhhh-------------------------------------------------
Confidence 9999999999999999999999874321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvll 262 (712)
. ......++..|+|||.+.+. .++.++|||||||++
T Consensus 156 ----------------------------------~-------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l 194 (262)
T cd06613 156 ----------------------------------A-------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA 194 (262)
T ss_pred ----------------------------------h-------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHH
Confidence 0 00013578899999999776 789999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC-CCch---hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV-LPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
|+|++ ||......... ....... .++. .........+|+.+||..+|..|||+.+++.|+|
T Consensus 195 ~~~~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 195 IELAELQPPMFDLHPMRAL-FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHhCCCCCCCCCHHHHH-HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999 55433322222 2222221 1111 1112234569999999999999999999999998
No 212
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.94 E-value=3.7e-27 Score=254.19 Aligned_cols=210 Identities=16% Similarity=0.206 Sum_probs=155.7
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..++||||+++++ ++.... ....+++++++.|++|.+++... .+++..++.++.||+.||+|||++||
T Consensus 65 ~Ei~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i 141 (345)
T cd07877 65 RELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADI 141 (345)
T ss_pred HHHHHHHHcCCCcccceee-eeeecccccccccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3556788899999999887 543322 22357889999999999988543 48999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||++......
T Consensus 142 vH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~------------------------------------------------ 173 (345)
T cd07877 142 IHRDLKPSNLAVNEDCELKILDFGLARHTDDE------------------------------------------------ 173 (345)
T ss_pred eecCCChHHEEEcCCCCEEEeccccccccccc------------------------------------------------
Confidence 99999999999999999999999987432100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
.....++.+|+|||.+.+ ..++.++|||||||++
T Consensus 174 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il 208 (345)
T cd07877 174 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 208 (345)
T ss_pred ---------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHH
Confidence 001356889999998866 4588999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc-c-----------------------CCCc-----hhhhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH-R-----------------------VLPP-----QLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~-~-----------------------~~~~-----~~~~~~~~~~~li~~~L~~dP 310 (712)
|+|++ ||............... . ..+. ......+...+||.+||+.+|
T Consensus 209 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp 288 (345)
T cd07877 209 AELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDS 288 (345)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCCh
Confidence 99998 55433221111110000 0 0000 011123455699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCch
Q 005147 311 SGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
.+|||+.++++||||.....+.
T Consensus 289 ~~R~t~~e~l~h~~f~~~~~~~ 310 (345)
T cd07877 289 DKRITAAQALAHAYFAQYHDPD 310 (345)
T ss_pred hhcCCHHHHhcChhhhhcCCCC
Confidence 9999999999999999765543
No 213
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.94 E-value=4.9e-27 Score=245.36 Aligned_cols=202 Identities=17% Similarity=0.187 Sum_probs=149.9
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
.+...+||||+.+++ .+.. ...+++++|+ .|++|.+++.+.+ .+++.+++.|+.|++.||.|||++||+|||||
T Consensus 50 ~~~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~ 124 (278)
T cd05606 50 LVSTGDCPFIVCMSY-AFHT---PDKLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLK 124 (278)
T ss_pred HHHhCCCCcEeeeee-eeec---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCC
Confidence 345578999998777 4422 2356677776 6999999985543 49999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.++++|||.+.......
T Consensus 125 p~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------------------------- 151 (278)
T cd05606 125 PANILLDEHGHVRISDLGLACDFSKKK----------------------------------------------------- 151 (278)
T ss_pred HHHEEECCCCCEEEccCcCccccCccC-----------------------------------------------------
Confidence 999999999999999999874321100
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHhhC-
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eLl~- 267 (712)
.....|+..|+|||.+.++ .++.++||||+||++|+|++
T Consensus 152 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g 192 (278)
T cd05606 152 ---------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 192 (278)
T ss_pred ---------------------------------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhC
Confidence 0013578899999999754 58999999999999999998
Q ss_pred --CCCCChhhH-HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 268 --PFSTGEEKT-RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
||....... ...........+.......+...+++.+||..+|.+|| ++.++++||||....
T Consensus 193 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 193 HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 554331111 11111111111111112245566999999999999999 999999999998864
No 214
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=2.8e-27 Score=241.16 Aligned_cols=193 Identities=17% Similarity=0.141 Sum_probs=143.4
Q ss_pred eccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
+....|||++.+++ .+.. ...+++++|+ .|++|.+++.+.. .+++..+..++.||+.||+|||++||+||||||
T Consensus 39 ~~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp 113 (237)
T cd05576 39 IIPHCVPNMVCLHK-YIVS---EDSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDLNP 113 (237)
T ss_pred HHhcCCCceeehhh-heec---CCeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 34457999999887 3322 2456777776 6899999985543 489999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+||+++.++.++++|||.+...+...
T Consensus 114 ~Nil~~~~~~~~l~df~~~~~~~~~~------------------------------------------------------ 139 (237)
T cd05576 114 NNILLDDRGHIQLTYFSRWSEVEDSC------------------------------------------------------ 139 (237)
T ss_pred HHEEEcCCCCEEEecccchhcccccc------------------------------------------------------
Confidence 99999999999999999763321100
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCCC
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFS 270 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf~ 270 (712)
....++..|+|||.+.+..++.++||||+||++|||+++..
T Consensus 140 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~ 180 (237)
T cd05576 140 ---------------------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKT 180 (237)
T ss_pred ---------------------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcc
Confidence 00234677999999988889999999999999999998543
Q ss_pred CChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-----HHHhcCcCC
Q 005147 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 325 (712)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~eiL~hp~~ 325 (712)
.................|. ...+...++|.+||+.||++||++ +++++||||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 181 LVECHPSGINTHTTLNIPE---WVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred hhhcCchhcccccccCCcc---cCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 2211111000000001111 123456699999999999999985 999999997
No 215
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.94 E-value=7.5e-27 Score=241.26 Aligned_cols=205 Identities=16% Similarity=0.151 Sum_probs=147.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++.+++ ++.. .+ ...++++++ .+++|.+++.+....+++..++.++.||+.||+|||+.||+||
T Consensus 46 e~~~l~~l~h~~iv~~~~-~~~~-~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 122 (262)
T cd05058 46 EGIIMKDFSHPNVLSLLG-ICLP-SE-GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHR 122 (262)
T ss_pred HHHHHccCCCCCcceEEE-Eeec-CC-CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 445688899999999887 4422 22 234555555 7899999996555557788889999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||+++....... ++.
T Consensus 123 dlk~~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------~~~------------- 156 (262)
T cd05058 123 DLAARNCMLDESFTVKVADFGLARDIYDKEY---------------------------------YSV------------- 156 (262)
T ss_pred ccCcceEEEcCCCcEEECCccccccccCCcc---------------------------------eee-------------
Confidence 9999999999999999999998853211100 000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 157 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 196 (262)
T cd05058 157 ----------------------------------------HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 196 (262)
T ss_pred ----------------------------------------cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHH
Confidence 0000023467899999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ |++...........+.....+.......+...+++.+||..+|++||++.++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 197 TRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred cCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 8 222222222233333333222222222344569999999999999999999986
No 216
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.94 E-value=4.5e-27 Score=256.37 Aligned_cols=203 Identities=15% Similarity=0.177 Sum_probs=147.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------------------- 76 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------------------- 76 (712)
++..+|..+ +||||+++++ ++.. ....+++||+ .|++|.+++....
T Consensus 87 ~Ei~il~~l~~HpnIv~l~~-~~~~---~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (375)
T cd05104 87 SELKVLSYLGNHINIVNLLG-ACTV---GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSC 162 (375)
T ss_pred HHHHHHHHhcCCcceeeeee-eecc---CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccc
Confidence 345566667 8999999888 5422 2345566665 7999999984321
Q ss_pred ----------------------------------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 77 ----------------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 77 ----------------------------------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
..+++..++.|+.||+.||.|||++||+||||||
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp 242 (375)
T cd05104 163 DSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAA 242 (375)
T ss_pred hhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCch
Confidence 1367888999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+||+++.++.++++|||+++...... .+
T Consensus 243 ~Nill~~~~~~kl~DfG~a~~~~~~~---------------------------------~~------------------- 270 (375)
T cd05104 243 RNILLTHGRITKICDFGLARDIRNDS---------------------------------NY------------------- 270 (375)
T ss_pred hhEEEECCCcEEEecCccceeccCcc---------------------------------cc-------------------
Confidence 99999999999999999885432110 00
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--- 267 (712)
. ......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 271 -----------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~ 314 (375)
T cd05104 271 -----------------V-------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS 314 (375)
T ss_pred -----------------c-------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 0 0000234567999999999999999999999999999996
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||............+.....+.......++..+|+.+||+.||++|||+.+|++
T Consensus 315 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 315 SPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred CCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 554433333333333333222221222345569999999999999999999986
No 217
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=8.2e-27 Score=245.49 Aligned_cols=209 Identities=16% Similarity=0.215 Sum_probs=149.1
Q ss_pred cceeeccC-CCCCccccccccccccc-ccCceEEEEeeCCccHHHhhcCC----CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~-~~~~~~l~~e~~g~sL~~~l~~~----~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
+..+++.+ .||||+++++.+..... ....+++++++.+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 50 E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~ 129 (295)
T cd07837 50 EISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH 129 (295)
T ss_pred HHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44566666 56999998873332222 12247888888777999988332 23589999999999999999999999
Q ss_pred CceeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||+||+++. ++.++++|||.+..+.....
T Consensus 130 ~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------- 166 (295)
T cd07837 130 GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVK------------------------------------------- 166 (295)
T ss_pred CeeecCCChHHEEEecCCCeEEEeecccceecCCCcc-------------------------------------------
Confidence 9999999999999998 88999999998743211100
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (712)
......++++|+|||.+.+. .++.++||||||
T Consensus 167 -----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG 199 (295)
T cd07837 167 -----------------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVG 199 (295)
T ss_pred -----------------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHH
Confidence 00012457899999988654 479999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcc---------------------cCCCc-h----hhhcCchhHHHHHHcCCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLPP-Q----LLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~---------------------~~~~~-~----~~~~~~~~~~li~~~L~~dP 310 (712)
|++|+|++ ||............... ....+ . .....+...+||.+||.++|
T Consensus 200 ~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P 279 (295)
T cd07837 200 CIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDP 279 (295)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCCh
Confidence 99999999 55443332222211110 00000 0 01123445589999999999
Q ss_pred CCCCCHHHHhcCcCCC
Q 005147 311 SGRPKMGELLQSEFLN 326 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~ 326 (712)
.+|||+.++|.||||+
T Consensus 280 ~~R~~~~eil~~~~~~ 295 (295)
T cd07837 280 AKRISAKAALTHPYFD 295 (295)
T ss_pred hhcCCHHHHhcCCCcC
Confidence 9999999999999985
No 218
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.94 E-value=4.9e-27 Score=251.56 Aligned_cols=215 Identities=18% Similarity=0.214 Sum_probs=159.2
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++|+|++.+++ ++.... ....+++++++.+++|.+++.... .+++..++.++.||+.||+|||++||+
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~ 125 (330)
T cd07834 48 REIKLLRHLRHENIIGLLD-ILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVI 125 (330)
T ss_pred HHHHHHHhcCCcchhhhhh-hhcccCcccccceEEEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3556788899999999888 443332 334678999998889999995544 599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||.+.........
T Consensus 126 H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~---------------------------------------------- 159 (330)
T cd07834 126 HRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE---------------------------------------------- 159 (330)
T ss_pred cCCCCHHHEEEcCCCCEEEcccCceEeecccccc----------------------------------------------
Confidence 9999999999999999999999988433211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
+.......++.+|+|||.+.+. .++.++|||||||++|
T Consensus 160 -----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~ 198 (330)
T cd07834 160 -----------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFA 198 (330)
T ss_pred -----------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHH
Confidence 0000113578999999999888 7999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc--CCCc------------------------h----hhhcCchhHHHHHHcCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR--VLPP------------------------Q----LLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~--~~~~------------------------~----~~~~~~~~~~li~~~L~~dP 310 (712)
+|++ ||...... ..+..+... ..++ . .....+...+|+.+||+.+|
T Consensus 199 ~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 277 (330)
T cd07834 199 ELLTRKPLFPGRDYI-DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDP 277 (330)
T ss_pred HHHcCCCCcCCCCHH-HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCCh
Confidence 9999 44433221 111111110 0000 0 01123445589999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCc
Q 005147 311 SGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
.+|||+.++++||||......
T Consensus 278 ~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 278 KKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhCCCHHHHHhCccHHhhccc
Confidence 999999999999999876554
No 219
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.94 E-value=7.5e-27 Score=239.92 Aligned_cols=202 Identities=15% Similarity=0.187 Sum_probs=148.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|+.++||||+++++ ++.. ...+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 42 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 117 (252)
T cd05084 42 QEARILKQYSHPNIVRLIG-VCTQ---KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIH 117 (252)
T ss_pred HHHHHHHhCCCCCcceEEE-EEcC---CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4455788899999999887 4432 2456777776 689999999655556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++...... .+
T Consensus 118 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----------------------------------~~-------------- 149 (252)
T cd05084 118 RDLAARNCLVTEKNVLKISDFGMSREEEDG----------------------------------VY-------------- 149 (252)
T ss_pred cccchheEEEcCCCcEEECccccCcccccc----------------------------------cc--------------
Confidence 999999999999999999999987432110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ........+..|+|||.+.+..++.++|||||||++|||
T Consensus 150 --------~--------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~ 189 (252)
T cd05084 150 --------A--------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEA 189 (252)
T ss_pred --------c--------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHH
Confidence 0 000001124569999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++..........+|+.+||..+|++|||+.++++
T Consensus 190 ~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 190 FSLGAVPYANLSN-QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HhCCCCCccccCH-HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 96 4433222 2223333332222222222345559999999999999999999975
No 220
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.94 E-value=7e-27 Score=240.53 Aligned_cols=203 Identities=22% Similarity=0.195 Sum_probs=153.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+...++.++|+|++++++ .+. ....+++++|+ .|++|.+++.+.. .+++..+..++.||+.||.|||+.||+|
T Consensus 51 ~e~~~l~~~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H 125 (258)
T cd06632 51 QEIALLSKLQHPNIVQYLG-TER---EEDNLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRNTVH 125 (258)
T ss_pred HHHHHHHhcCCCCchheee-eEe---cCCeEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3445678899999999887 432 22456777777 5889999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.......
T Consensus 126 ~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~------------------------------------------------- 156 (258)
T cd06632 126 RDIKGANILVDTNGVVKLADFGMAKQVVEFS------------------------------------------------- 156 (258)
T ss_pred CCCCHHHEEECCCCCEEEccCccceeccccc-------------------------------------------------
Confidence 9999999999999999999999874321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.... ++.++|+|||||++|+
T Consensus 157 ------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~ 194 (258)
T cd06632 157 ------------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLE 194 (258)
T ss_pred ------------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHH
Confidence 000135788999999987766 8999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||..................+.......+...+++.+||..+|.+||++.+++.|||+
T Consensus 195 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 195 MATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 998 5544432222222222122222222234556699999999999999999999999996
No 221
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.94 E-value=3.9e-27 Score=256.66 Aligned_cols=203 Identities=18% Similarity=0.202 Sum_probs=147.6
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-----------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------------------- 75 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~----------------------------- 75 (712)
.+..+++.+ +|+||+++++ .+. ....+++++|+ .+++|.+++...
T Consensus 90 ~E~~il~~l~~h~nIv~~~~-~~~---~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
T cd05106 90 SELKILSHLGQHKNIVNLLG-ACT---HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKK 165 (374)
T ss_pred HHHHHHHhhccCCceeeEee-Eec---CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcc
Confidence 345567777 8999999887 442 23467777777 599999988431
Q ss_pred ----------------------------------------CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceee
Q 005147 76 ----------------------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (712)
Q Consensus 76 ----------------------------------------~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll 115 (712)
...+++.+++.|+.||+.||+|||++||+||||||+||++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~ 245 (374)
T cd05106 166 YIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL 245 (374)
T ss_pred cccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE
Confidence 1236788899999999999999999999999999999999
Q ss_pred cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccc
Q 005147 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (712)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~ 195 (712)
+.++.++|+|||+++...... .+
T Consensus 246 ~~~~~~kL~DfGla~~~~~~~---------------------------------~~------------------------ 268 (374)
T cd05106 246 TDGRVAKICDFGLARDIMNDS---------------------------------NY------------------------ 268 (374)
T ss_pred eCCCeEEEeeceeeeeccCCc---------------------------------ce------------------------
Confidence 999999999999885321110 00
Q ss_pred ccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCC
Q 005147 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFST 271 (712)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~ 271 (712)
. ......++..|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 269 ------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~ 317 (374)
T cd05106 269 ------------------------------V-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPG 317 (374)
T ss_pred ------------------------------e-eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 0 0000234667999999988889999999999999999985 5554
Q ss_pred ChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
..........+.....+.......+...+++.+||+.+|.+|||+.++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 318 ILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 33322222322222222111122355669999999999999999999976
No 222
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.94 E-value=1.7e-26 Score=246.11 Aligned_cols=205 Identities=16% Similarity=0.131 Sum_probs=155.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+..+++.++|||++.+++ ++.. ....++++|+..++|.+++......+++.++..++.||+.||.|||++||+|||
T Consensus 75 e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~d 150 (317)
T cd06635 75 EVKFLQRIKHPNSIEYKG-CYLR---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRD 150 (317)
T ss_pred HHHHHHhCCCCCEEEEEE-EEee---CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 455678899999999887 4432 345788888877789888855555689999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||++......
T Consensus 151 L~p~Nil~~~~~~~kl~dfg~~~~~~~~---------------------------------------------------- 178 (317)
T cd06635 151 IKAGNILLTEPGQVKLADFGSASIASPA---------------------------------------------------- 178 (317)
T ss_pred CCcccEEECCCCCEEEecCCCccccCCc----------------------------------------------------
Confidence 9999999999999999999987321100
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHHH
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~e 264 (712)
....|+..|+|||.+. ...++.++|||||||++||
T Consensus 179 ------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~e 216 (317)
T cd06635 179 ------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 216 (317)
T ss_pred ------------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHH
Confidence 0035688899999974 3458999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++ ||..................+.......+...+++.+||+.+|.+||++.++++|+|+.....
T Consensus 217 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 217 LAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred HHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 998 554433322222222222222111122334569999999999999999999999999876544
No 223
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=7.4e-27 Score=243.73 Aligned_cols=207 Identities=17% Similarity=0.190 Sum_probs=155.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|+|++.+++ .+.+ ...+++++|+ .|++|.+++... .+++.++..++.||+.||+|||+.|++|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ivH 124 (277)
T cd06640 51 QEITVLSQCDSPYVTKYYG-SYLK---GTKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKKIH 124 (277)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEE---CCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4555788899999999888 4432 3457777776 689999998543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++........
T Consensus 125 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 156 (277)
T cd06640 125 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQI------------------------------------------------ 156 (277)
T ss_pred cCCChhhEEEcCCCCEEEcccccceeccCCcc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|+|||||++|||
T Consensus 157 ------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el 194 (277)
T cd06640 157 ------------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 194 (277)
T ss_pred ------------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHH
Confidence 00013568899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... .....+.....+...........+++.+||..+|++||++.++++||||.....
T Consensus 195 ~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 195 AKGEPPNSDMHPM-RVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred HHCCCCCCCcChH-hHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 99 44322221 222222222222222222344559999999999999999999999999976543
No 224
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.94 E-value=6.7e-27 Score=240.73 Aligned_cols=204 Identities=17% Similarity=0.224 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|||++.+++ .+. ....+++++|+ .+++|.+++.. ....+++.+++.++.||+.||.|||++|++
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08218 48 KEVAVLSNMKHPNIVQYQE-SFE---ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKIL 123 (256)
T ss_pred HHHHHHHhCCCCCeeeeEe-eec---CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 3455788999999999887 442 23456777776 58999998844 334588999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||.+........
T Consensus 124 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd08218 124 HRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE----------------------------------------------- 156 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEeeccceeecCcchh-----------------------------------------------
Confidence 999999999999999999999998743211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+..++.++|+|||||++|+
T Consensus 157 -------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~ 193 (256)
T cd08218 157 -------------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYE 193 (256)
T ss_pred -------------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHH
Confidence 0001346888999999988889999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||....... ....+.....++..........++|.+||+.+|.+||++.++++||||
T Consensus 194 l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 194 MCTLKHAFEAGNMKN-LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHcCCCCccCCCHHH-HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999 555443332 333333444443333334556699999999999999999999999997
No 225
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.94 E-value=2.6e-27 Score=255.17 Aligned_cols=213 Identities=15% Similarity=0.141 Sum_probs=151.1
Q ss_pred cceeeccCCCCCcccccccccccccc-----------cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAA-----------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~-----------~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~ 96 (712)
+..+++.++|||++.+++ ++..... ...+++++|+.+++|.+++... .+++..++.++.||+.||.
T Consensus 52 Ei~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~ 128 (342)
T cd07854 52 EIKIIRRLDHDNIVKVYE-VLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLK 128 (342)
T ss_pred HHHHHHhcCCCcchhhHh-hhcccccccccccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHH
Confidence 455688899999999887 3332211 1357889999888999988533 4899999999999999999
Q ss_pred HhhhcCceeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 97 AAHSQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
|||+.||+||||||+||+++. ++.++++|||.++........ ..
T Consensus 129 ~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~----- 173 (342)
T cd07854 129 YIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------------------------KG----- 173 (342)
T ss_pred HHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------------------------cc-----
Confidence 999999999999999999984 557899999987432110000 00
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccc
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 254 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sD 254 (712)
......++..|+|||.+.+ ..++.++|
T Consensus 174 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~D 201 (342)
T cd07854 174 ----------------------------------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAID 201 (342)
T ss_pred ----------------------------------------------------ccccccccccccCHHHHhCccccCchhh
Confidence 0000246889999998755 45889999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcc-----------------------cCCCc----h-hhhcCchhHHHHH
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-----------------------RVLPP----Q-LLLKFPKEASFCL 303 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~-----------------------~~~~~----~-~~~~~~~~~~li~ 303 (712)
||||||++|+|++ ||............+.. ...+. . .........+|+.
T Consensus 202 iwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 281 (342)
T cd07854 202 MWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLE 281 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHH
Confidence 9999999999998 66544332222111110 00000 0 1112234458999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||..||.+|||+.++|+||||+....
T Consensus 282 ~~L~~dP~~R~t~~ell~h~~~~~~~~ 308 (342)
T cd07854 282 QILTFNPMDRLTAEEALMHPYMSCYSC 308 (342)
T ss_pred HHhCCCchhccCHHHHhCCCccccccC
Confidence 999999999999999999999986543
No 226
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.94 E-value=4.2e-27 Score=242.68 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++++++|||++.+++ .+. ....+++++++ .|++|.+++... ..+++.++..|+.||++||.|||++||+|
T Consensus 49 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h 123 (258)
T cd05578 49 NERRILQELNHPFLVNLWY-SFQ---DEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIH 123 (258)
T ss_pred HHHHHHHhCCCCChHHHHH-hhc---CCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3445788999999999877 442 33456777776 699999999555 45899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.......
T Consensus 124 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~------------------------------------------------- 154 (258)
T cd05578 124 RDIKPDNILLDEQGHVHITDFNIATKVTPDT------------------------------------------------- 154 (258)
T ss_pred cCCCHHHeEEcCCCCEEEeecccccccCCCc-------------------------------------------------
Confidence 9999999999999999999999874321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|+|||||++|+|
T Consensus 155 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l 192 (258)
T cd05578 155 ------------------------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYEC 192 (258)
T ss_pred ------------------------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHH
Confidence 00013468889999999888899999999999999999
Q ss_pred hC---CCCCChh--hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH--HHHhcCcCC
Q 005147 266 FC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM--GELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~--~eiL~hp~~ 325 (712)
++ ||..... .......... ..+.......+...++|.+||..+|.+||++ .++++||||
T Consensus 193 ~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 193 LRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HhCCCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 98 5554332 2222222221 1111122223455699999999999999999 999999998
No 227
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-28 Score=253.41 Aligned_cols=230 Identities=17% Similarity=0.207 Sum_probs=174.8
Q ss_pred ccccccccccCCCCCcceeee----ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhh-cCCCCCCC
Q 005147 6 LRGERFGVRGDDSNDFELRKH----SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVD 80 (712)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~~----~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l-~~~~~~l~ 80 (712)
..|+.++|+=.+..+.--+++ .+..||..+.||.||.+-+ .| +. .+.+++|||-..|++.+.| .....+|+
T Consensus 587 ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~-M~--ET-~ervFVVMEKl~GDMLEMILSsEkgRL~ 662 (888)
T KOG4236|consen 587 KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLEC-MF--ET-PERVFVVMEKLHGDMLEMILSSEKGRLP 662 (888)
T ss_pred ccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEE-ee--cC-CceEEEEehhhcchHHHHHHHhhcccch
Confidence 456666666555543332222 3456899999999999777 44 22 3456777777666666655 44555699
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCc
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (712)
+...+.++.||+.||.|||-+||+|+||||+|||+. +.-++|+||||+++.+|...
T Consensus 663 er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--------------------- 721 (888)
T KOG4236|consen 663 ERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--------------------- 721 (888)
T ss_pred HHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh---------------------
Confidence 999999999999999999999999999999999997 44689999999998776542
Q ss_pred hhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCcc
Q 005147 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (712)
Q Consensus 158 ~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (712)
| ....+|||.
T Consensus 722 -------------F---------------------------------------------------------RrsVVGTPA 731 (888)
T KOG4236|consen 722 -------------F---------------------------------------------------------RRSVVGTPA 731 (888)
T ss_pred -------------h---------------------------------------------------------hhhhcCCcc
Confidence 1 112689999
Q ss_pred ccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCC
Q 005147 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R 313 (712)
|.|||+++...|..+-|+||+||++|.-|. ||...++-...+++...- +|+..+. ..+.+.+||..+|+..=.+|
T Consensus 732 YLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFM-yPp~PW~eis~~AidlIn~LLqVkm~kR 810 (888)
T KOG4236|consen 732 YLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFM-YPPNPWSEISPEAIDLINNLLQVKMRKR 810 (888)
T ss_pred ccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccc-cCCCchhhcCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999887 554444433344433333 4555444 44555699999999999999
Q ss_pred CCHHHHhcCcCCCCCcCc
Q 005147 314 PKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~~ 331 (712)
.|++..|.|||+++...-
T Consensus 811 ysvdk~lsh~Wlq~yq~w 828 (888)
T KOG4236|consen 811 YSVDKSLSHPWLQDYQTW 828 (888)
T ss_pred cchHhhccchhhhcchHH
Confidence 999999999999987553
No 228
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.94 E-value=8.6e-27 Score=240.56 Aligned_cols=202 Identities=14% Similarity=0.145 Sum_probs=151.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|||++++++ +++. ..+++++|+ .+++|.+++......+++..++.++.||+.||.|||++|++|
T Consensus 44 ~E~~~l~~l~h~~ii~~~~-~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 118 (257)
T cd05115 44 REAEIMHQLDNPYIVRMIG-VCEA----EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVH 118 (257)
T ss_pred HHHHHHHhcCCCCeEEEEE-EEcC----CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 4456788899999999887 5532 345666666 689999999655556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 119 ~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 151 (257)
T cd05115 119 RDLAARNVLLVNQHYAKISDFGLSKALGADDSY----------------------------------------------- 151 (257)
T ss_pred cccchheEEEcCCCcEEeccCCccccccCCccc-----------------------------------------------
Confidence 999999999999999999999988533211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.. ......++..|+|||.+.+..++.++|||||||++|||
T Consensus 152 --------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 191 (257)
T cd05115 152 --------------------YK--------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEA 191 (257)
T ss_pred --------------------ee--------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00 00001235679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....+.......++..+++.+||..+|++||++.+|++
T Consensus 192 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 192 FSYGQKPYKKMKG-PEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred hcCCCCCcCcCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 85 5543322 2334444443333333334456669999999999999999999876
No 229
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.94 E-value=8.6e-27 Score=243.95 Aligned_cols=204 Identities=17% Similarity=0.231 Sum_probs=148.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|+|++.+++ .+.. ...+++++|+ .+++|..++... ..+++..++.++.||+.||.|||++||+|
T Consensus 49 ~e~~~l~~~~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~H 123 (286)
T cd07847 49 REIRMLKQLKHPNLVNLIE-VFRR---KRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCIH 123 (286)
T ss_pred HHHHHHHhCCCCCEeeeee-EEee---CCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 3455788899999999887 4422 3456777777 566777666443 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 155 (286)
T cd07847 124 RDVKPENILITKQGQIKLCDFGFARILTGPGD------------------------------------------------ 155 (286)
T ss_pred cCCChhhEEEcCCCcEEECccccceecCCCcc------------------------------------------------
Confidence 99999999999999999999998843211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~e 264 (712)
......++.+|+|||.+.+. .++.++|||||||++|+
T Consensus 156 ------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~ 193 (286)
T cd07847 156 ------------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAE 193 (286)
T ss_pred ------------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHH
Confidence 00013468899999998764 48899999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhc--cc------------------CCCc---------hhhhcCchhHHHHHHcCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~--~~------------------~~~~---------~~~~~~~~~~~li~~~L~~dP~~ 312 (712)
|++ ||.........+.... .. ..+. .+........+|+.+||..+|++
T Consensus 194 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 273 (286)
T cd07847 194 LLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTE 273 (286)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccc
Confidence 999 5544332222111100 00 0000 01112234459999999999999
Q ss_pred CCCHHHHhcCcCC
Q 005147 313 RPKMGELLQSEFL 325 (712)
Q Consensus 313 Rpt~~eiL~hp~~ 325 (712)
|||+.+++.||||
T Consensus 274 Rp~~~eil~~~~f 286 (286)
T cd07847 274 RLSCEELLEHPYF 286 (286)
T ss_pred cCCHHHHhcCCCC
Confidence 9999999999998
No 230
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.94 E-value=9.7e-27 Score=247.38 Aligned_cols=216 Identities=17% Similarity=0.152 Sum_probs=152.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+||+.+++ ++.. ...+++++++ .+++|.+++.. ....+++..++.+++||+.||+|||++||+
T Consensus 48 ~Ei~~l~~l~h~~i~~~~~-~~~~---~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~iv 123 (314)
T cd08216 48 QEIITSRQLQHPNILPYVT-SFIV---DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFI 123 (314)
T ss_pred HHHHHHHhcCCcchhhhhh-eeec---CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4556788899999999888 4422 2345666666 68999999954 234589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++||+.+......... . ..+
T Consensus 124 H~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~----~-------------------------~~~------------- 161 (314)
T cd08216 124 HRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR----Q-------------------------RVV------------- 161 (314)
T ss_pred cCCCCcceEEEecCCceEEecCccceeecccccc----c-------------------------ccc-------------
Confidence 9999999999999999999999987432110000 0 000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvll 262 (712)
.. ......++..|+|||++.+. .++.++||||+||++
T Consensus 162 ------------------------~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il 200 (314)
T cd08216 162 ------------------------HD-----------------FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITA 200 (314)
T ss_pred ------------------------cc-----------------ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHH
Confidence 00 00013467889999998663 488999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--------CCch-----------------------h-hhcCchhHHHHHHcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--------LPPQ-----------------------L-LLKFPKEASFCLWLLH 307 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--------~~~~-----------------------~-~~~~~~~~~li~~~L~ 307 (712)
|||++ ||............+.... .+.. . ....+...+|+.+||.
T Consensus 201 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 280 (314)
T cd08216 201 CELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQ 280 (314)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhh
Confidence 99998 6654433322222221110 0000 0 0011234589999999
Q ss_pred CCCCCCCCHHHHhcCcCCCCCc
Q 005147 308 PEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.+|++|||+.++|+||||+...
T Consensus 281 ~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 281 RDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred cCCCcCcCHHHHhcCchHhhhc
Confidence 9999999999999999998664
No 231
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.94 E-value=8.1e-27 Score=240.80 Aligned_cols=195 Identities=17% Similarity=0.223 Sum_probs=141.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||++.+++ ++.. ....++++|+ .+++|.+++...+..+++..++.++.||+.||.|||++||+|
T Consensus 48 ~e~~~l~~~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 123 (258)
T cd05078 48 EAASMMSQLSHKHLVLNYG-VCVC---GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTH 123 (258)
T ss_pred HHHHHHHhCCCCChhheee-EEEe---CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3455788899999999888 4322 2345566666 689999999666556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCc--------EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 106 HNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 106 rDLkP~NIll~~~~~--------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
|||||+||+++.++. ++++|||.+......
T Consensus 124 ~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~------------------------------------------ 161 (258)
T cd05078 124 GNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK------------------------------------------ 161 (258)
T ss_pred CCCccceEEEecccccccCCCceEEecccccccccCCc------------------------------------------
Confidence 999999999987765 466666654211000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 256 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIw 256 (712)
....++..|+|||.+.+. .++.++|||
T Consensus 162 ----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Diw 189 (258)
T cd05078 162 ----------------------------------------------------EILLERIPWVPPECIENPQNLSLAADKW 189 (258)
T ss_pred ----------------------------------------------------hhccccCCccCchhccCCCCCCchhhHH
Confidence 003467889999999774 489999999
Q ss_pred HHHHHHHHhhCC---CCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 257 RLGVLLFELFCP---FSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 257 SlGvll~eLl~p---f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||++|||+++ +............... ...| ...+++..+++.+||+.+|++|||++++++.
T Consensus 190 slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 190 SFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLP---APKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCC---CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 999999999993 2111111111111111 1112 1234566799999999999999999999873
No 232
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94 E-value=8.4e-27 Score=240.45 Aligned_cols=201 Identities=13% Similarity=0.128 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++||||+++++ ++. ...+++++++ .+++|.+++.... .+++..+..++.||+.||+|||++||+|
T Consensus 45 ~e~~~l~~l~h~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H 118 (257)
T cd05116 45 REANVMQQLDNPYIVRMIG-ICE----AESWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFVH 118 (257)
T ss_pred HHHHHHHhCCCCCcceEEE-EEc----CCCcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 3456788899999999887 442 2345666766 6789999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++...+.... +
T Consensus 119 ~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~-------------- 151 (257)
T cd05116 119 RDLAARNVLLVTQHYAKISDFGLSKALGADEN---------------------------------Y-------------- 151 (257)
T ss_pred cccchhhEEEcCCCeEEECCCccccccCCCCC---------------------------------e--------------
Confidence 99999999999999999999998854322100 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+ .......++..|+|||.+....++.++|||||||++|||
T Consensus 152 ~----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 191 (257)
T cd05116 152 Y----------------------------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEA 191 (257)
T ss_pred e----------------------------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHH
Confidence 0 000002345789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++......+...++|.+||+.+|++||++.+|.+
T Consensus 192 ~t~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 192 FSYGQKPYKGMKG-NEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HhCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 86 5543332 2334444444333333334456669999999999999999998865
No 233
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.94 E-value=8.1e-27 Score=243.99 Aligned_cols=205 Identities=16% Similarity=0.237 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+|++++++ .+.+ ...+++++|+.+++|.+++.... ..+++..++.++.||+.||+|||++||+
T Consensus 47 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (284)
T cd07836 47 REISLMKELKHENIVRLHD-VIHT---ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVL 122 (284)
T ss_pred HHHHHHHhhcCCCEeeeee-eEee---CCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3456788899999999888 4422 34678888887779999884433 4589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++........
T Consensus 123 h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 155 (284)
T cd07836 123 HRDLKPQNLLINKRGELKLADFGLARAFGIPVN----------------------------------------------- 155 (284)
T ss_pred eCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-----------------------------------------------
Confidence 999999999999999999999998743211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
......++.+|++||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 192 (284)
T cd07836 156 -------------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMA 192 (284)
T ss_pred -------------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHH
Confidence 000134688999999986654 789999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc-------------------cCCCc--------hhhhcCchhHHHHHHcCCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH-------------------RVLPP--------QLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~-------------------~~~~~--------~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|++ ||............+.. ...+. ......+...+++.+||+.+|.+|
T Consensus 193 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 272 (284)
T cd07836 193 EMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELR 272 (284)
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccC
Confidence 9999 44433221111111000 00000 001123445599999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
|++.++++||||
T Consensus 273 ~~~~~~l~~~~f 284 (284)
T cd07836 273 ISAHDALQHPWF 284 (284)
T ss_pred CCHHHHhcCCCC
Confidence 999999999998
No 234
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.94 E-value=1.2e-26 Score=241.17 Aligned_cols=205 Identities=19% Similarity=0.256 Sum_probs=151.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|+|++++++ ++.. ...+++++|+ .|++|.+++++.+ .+++..++.++.||+.||.|||++|++|+
T Consensus 58 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 132 (272)
T cd06629 58 EIETLKDLDHLNIVQYLG-FETT---EEYLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILHR 132 (272)
T ss_pred HHHHHHhcCCCCcceEEE-Eecc---CCceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeeec
Confidence 445788899999999887 4432 2456666666 6999999996654 58999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+........
T Consensus 133 dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------- 163 (272)
T cd06629 133 DLKADNLLVDADGICKISDFGISKKSDDIYD------------------------------------------------- 163 (272)
T ss_pred CCChhhEEEcCCCeEEEeecccccccccccc-------------------------------------------------
Confidence 9999999999999999999998743211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFE 264 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvll~e 264 (712)
+.......|+..|+|||.+.... ++.++|+||||+++|+
T Consensus 164 ---------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~ 204 (272)
T cd06629 164 ---------------------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLE 204 (272)
T ss_pred ---------------------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHH
Confidence 00001135788999999987654 8899999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcc---cCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|++ ||............... ...+...... .....+++.+||.++|.+|||+.++|+||||
T Consensus 205 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 205 MFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 999 55433332222221111 1122222222 3445599999999999999999999999997
No 235
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.94 E-value=6.2e-27 Score=245.60 Aligned_cols=207 Identities=17% Similarity=0.157 Sum_probs=150.7
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhh----cCCCCCCChhHHHHHHHHHHHHHHHhhhc-
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL----DKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 101 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l----~~~~~~l~~~~~~~i~~qil~~l~~lHs~- 101 (712)
+...+..+ +|+||+++++ ++.. ....++++++.+.+|.++. ......+++..+..++.|++.||+|||+.
T Consensus 52 e~~~l~~~~~~~~iv~~~~-~~~~---~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 127 (288)
T cd06616 52 DLDVVMRSSDCPYIVKFYG-ALFR---EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL 127 (288)
T ss_pred HHHHHHHhcCCCCEeeeee-EEec---CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 33456666 5999999888 3322 3456788888877776643 12234589999999999999999999985
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.++++|||++.......
T Consensus 128 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--------------------------------------------- 162 (288)
T cd06616 128 KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI--------------------------------------------- 162 (288)
T ss_pred CeeccCCCHHHEEEccCCcEEEeecchhHHhccCC---------------------------------------------
Confidence 99999999999999999999999999874321110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRL 258 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSl 258 (712)
......|+..|+|||.+.+. .++.++|||||
T Consensus 163 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~sl 196 (288)
T cd06616 163 ----------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSL 196 (288)
T ss_pred ----------------------------------------------ccccccCccCccCHHHhccccccCCcchhhhhHH
Confidence 00013468889999999776 58999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhh----hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL----LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
||++|+|++ ||.........+........+.... ...+...+|+.+||+.+|++|||+.+++.||||....
T Consensus 197 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 197 GITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred HHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 999999998 5544332222333322222221111 1234456999999999999999999999999998643
No 236
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.94 E-value=4e-27 Score=238.85 Aligned_cols=202 Identities=17% Similarity=0.184 Sum_probs=143.5
Q ss_pred ccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccc-c
Q 005147 53 AIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC-S 130 (712)
Q Consensus 53 ~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~-~ 130 (712)
...+.||++|..|.|+.++|+. ...+++...++.+.+||+++|.|||+.+++|-||||+|||+.++..++.-.-+.. .
T Consensus 162 yrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 162 YRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred ccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence 3458999999999999999955 4567899999999999999999999999999999999999987666655332221 0
Q ss_pred CCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccc
Q 005147 131 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210 (712)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (712)
.... ......+++|
T Consensus 242 ~~r~------------------------------------------------------------------~ks~~I~vID 255 (415)
T KOG0671|consen 242 FIRP------------------------------------------------------------------LKSTAIKVID 255 (415)
T ss_pred eecc------------------------------------------------------------------CCCcceEEEe
Confidence 0000 0001223444
Q ss_pred cccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCC---CCC--hhhHHHHHhhccc
Q 005147 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPF---STG--EEKTRTMSSLRHR 285 (712)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf---~~~--~~~~~~~~~~~~~ 285 (712)
||.+...-+. ....+.|..|+|||++.+-+++.++||||+||+|+||++++ ... .++...|..+..
T Consensus 256 FGsAtf~~e~--------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG- 326 (415)
T KOG0671|consen 256 FGSATFDHEH--------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG- 326 (415)
T ss_pred cCCcceeccC--------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC-
Confidence 4422111111 01256799999999999999999999999999999999943 333 345555555443
Q ss_pred CCCchhhhcC-------------------------------------------chhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 286 VLPPQLLLKF-------------------------------------------PKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 286 ~~~~~~~~~~-------------------------------------------~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.+|....... ....+|+.+||..||.+|+|+.|+|+|
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 2222111100 112389999999999999999999999
Q ss_pred cCCCCCc
Q 005147 323 EFLNEPR 329 (712)
Q Consensus 323 p~~~~~~ 329 (712)
|||+...
T Consensus 407 pFF~~~~ 413 (415)
T KOG0671|consen 407 PFFARLT 413 (415)
T ss_pred HHhhcCC
Confidence 9998754
No 237
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.94 E-value=6.9e-27 Score=242.05 Aligned_cols=193 Identities=12% Similarity=0.117 Sum_probs=139.4
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..++..++||||+++++ ++.. ....++++|+ .+++|..++......+++..++.|+.||+.||+|||++||+|||
T Consensus 55 ~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d 130 (262)
T cd05077 55 ASMMRQVSHKHIVLLYG-VCVR---DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGN 130 (262)
T ss_pred HHHHHhCCCCCEeeEEE-EEec---CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCC
Confidence 45678899999999888 4422 2344566666 68899988865555689999999999999999999999999999
Q ss_pred CCCCceeecCCCc-------EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 108 VRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 108 LkP~NIll~~~~~-------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
|||+||+++.++. ++++|||++......
T Consensus 131 lkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~--------------------------------------------- 165 (262)
T cd05077 131 VCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR--------------------------------------------- 165 (262)
T ss_pred CCcccEEEecCCccCCCCceeEeCCCCCCccccCc---------------------------------------------
Confidence 9999999986654 788887766321100
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-CCCCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDIwSlG 259 (712)
....++..|+|||.+. +..++.++||||||
T Consensus 166 -------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 196 (262)
T cd05077 166 -------------------------------------------------QECVERIPWIAPECVEDSKNLSIAADKWSFG 196 (262)
T ss_pred -------------------------------------------------ccccccccccChhhhcCCCCCCchhHHHHHH
Confidence 0034678899999886 45589999999999
Q ss_pred HHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 260 vll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|++|||++ ||...... .. ......... ..........+|+.+||+.||.+||++.+|+++
T Consensus 197 ~~l~el~~~~~~p~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 197 TTLWEICYNGEIPLKDKTLA-EK-ERFYEGQCM-LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHHHhCCCCCCCCcchh-HH-HHHHhcCcc-CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 99999974 44322211 11 111111111 111122445689999999999999999999874
No 238
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94 E-value=1.3e-26 Score=239.99 Aligned_cols=200 Identities=19% Similarity=0.184 Sum_probs=149.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|..++|+|++++++ ++.. ...+++++|+ .+++|.+++.. ....+++..++.++.|++.||.|||++||+|
T Consensus 52 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 127 (263)
T cd05052 52 EAAVMKEIKHPNLVQLLG-VCTR---EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 127 (263)
T ss_pred HHHHHHhCCCCChhheEE-EEcC---CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 445788899999999887 4422 3356777776 68999999944 3345899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+.........
T Consensus 128 ~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~----------------------------------------------- 160 (263)
T cd05052 128 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYT----------------------------------------------- 160 (263)
T ss_pred cccCcceEEEcCCCcEEeCCCccccccccceee-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 161 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 198 (263)
T cd05052 161 ------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 198 (263)
T ss_pred ------------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHH
Confidence 00001235679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.... .......+.....+.......+...+++.+||..+|++|||+.++++
T Consensus 199 ~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 199 ATYGMSPYPGID-LSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HcCCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 96 454332 23333334333222222233345569999999999999999999976
No 239
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.94 E-value=9.9e-27 Score=240.17 Aligned_cols=198 Identities=16% Similarity=0.252 Sum_probs=150.8
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
.....+|+|++++++ .+. ....+++++|+ .|++|.+++...+ .+++..+..++.||+.||.|||+.||+|+||+
T Consensus 50 ~~~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~ 124 (260)
T cd05611 50 MMIQGESPYVAKLYY-SFQ---SKDYLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK 124 (260)
T ss_pred HhhcCCCCCeeeeee-eEE---cCCeEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 445679999999887 442 23456677766 6999999995543 48999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.++++|||++......
T Consensus 125 p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------------ 150 (260)
T cd05611 125 PENLLIDQTGHLKLTDFGLSRNGLEN------------------------------------------------------ 150 (260)
T ss_pred HHHeEECCCCcEEEeecccceecccc------------------------------------------------------
Confidence 99999999999999999977321100
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
....|+..|+|||.+.+..++.++||||||+++|+|++
T Consensus 151 ----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 190 (260)
T cd05611 151 ----------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY 190 (260)
T ss_pred ----------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCC
Confidence 00346888999999988889999999999999999998
Q ss_pred -CCCCChhhHHHHHhhccc--CCCchhh-hcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCC
Q 005147 268 -PFSTGEEKTRTMSSLRHR--VLPPQLL-LKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 328 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~ 328 (712)
||...... .....+... ..+.... ...+...+++.+||+.+|.+||+ +.|+|.||||...
T Consensus 191 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 191 PPFHAETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred CCCCCCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 66543332 222222221 1222222 23345569999999999999995 5799999999764
No 240
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.94 E-value=7.6e-27 Score=243.59 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=154.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|||++.+++ .+. ....+++++|+ .+++|.+++.. ..+++..++.++.||++||.|||++||+|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH 124 (277)
T cd06642 51 QEITVLSQCDSPYITRYYG-SYL---KGTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIH 124 (277)
T ss_pred HHHHHHHcCCCCccHhhhc-ccc---cCCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 5566788899999999888 443 23456777777 58899998854 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++........
T Consensus 125 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 156 (277)
T cd06642 125 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQI------------------------------------------------ 156 (277)
T ss_pred cCCChheEEEeCCCCEEEccccccccccCcch------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|+|||||++|||
T Consensus 157 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 194 (277)
T cd06642 157 ------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194 (277)
T ss_pred ------------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hCCCCCChh--hHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FCPFSTGEE--KTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~pf~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+++..+... .......+.... ++..... .....+++.+||..+|.+||++.++++||||....
T Consensus 195 ~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 195 AKGEPPNSDLHPMRVLFLIPKNS-PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred HhCCCCCcccchhhHHhhhhcCC-CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 994333211 111122222222 2222222 23455999999999999999999999999987643
No 241
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.94 E-value=1e-26 Score=239.78 Aligned_cols=201 Identities=16% Similarity=0.211 Sum_probs=150.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...+..++||||+++++ ++.. ...+++++|+ .+++|.+++......+++.+++.++.||+.||.|||+.||+|+
T Consensus 49 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 124 (256)
T cd05113 49 EAKVMMKLSHEKLVQLYG-VCTK---QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHR 124 (256)
T ss_pred HHHHHhcCCCCCeeeEEE-EEcc---CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 445688899999999887 5532 2456777777 5889999996544468999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||.++........
T Consensus 125 dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~------------------------------------------------ 156 (256)
T cd05113 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT------------------------------------------------ 156 (256)
T ss_pred ccCcceEEEcCCCCEEECCCccceecCCCcee------------------------------------------------
Confidence 99999999999999999999987432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 157 -----------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~ 195 (256)
T cd05113 157 -----------------------------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195 (256)
T ss_pred -----------------------------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHh
Confidence 000023467899999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||..... ......+.....+...........+++.+||+.+|.+|||+.+++.+
T Consensus 196 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 196 SLGKMPYERFNN-SETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred cCCCCCcCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 7 4443332 22333333332222222233455699999999999999999999864
No 242
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.94 E-value=8.1e-27 Score=243.44 Aligned_cols=207 Identities=16% Similarity=0.177 Sum_probs=154.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+|..++|||++.+++ .+.. ...+|+++++ .|++|.+++.+.. ..+++.+++.++.||+.||.|||++||+
T Consensus 42 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 117 (277)
T cd05577 42 NEKKILEKVSSRFIVSLAY-AFET---KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIV 117 (277)
T ss_pred HHHHHHHhCCCCCEeeeee-EEec---CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3556788899999999877 4422 2456777777 6899999995433 3589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||.+.......
T Consensus 118 H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~------------------------------------------------ 149 (277)
T cd05577 118 YRDLKPENVLLDDHGNVRISDLGLAVELKGGK------------------------------------------------ 149 (277)
T ss_pred cCCCCHHHEEECCCCCEEEccCcchhhhccCC------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 150 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 186 (277)
T cd05577 150 -------------------------------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYE 186 (277)
T ss_pred -------------------------------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence 0000346778999999988889999999999999999
Q ss_pred hhC---CCCCChh---hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||..... .......... ..........+...++|.+||+.+|.+|| ++.++++||||....
T Consensus 187 l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 187 MIAGRSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred HhhCCCCCCCCcccccHHHHHhcccc-ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 998 5543322 1111111111 11111112345566999999999999999 888999999997643
No 243
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=1.1e-26 Score=242.66 Aligned_cols=204 Identities=18% Similarity=0.254 Sum_probs=153.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+...|+.++|+|++++++ ++.+ ...+++++|+.+++|.+++......+++.+++.++.||+.||.|||++||+|+
T Consensus 47 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 122 (283)
T cd05118 47 REIKLLKELNHPNIIKLLD-VFRH---KGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHR 122 (283)
T ss_pred HHHHHHHHhcCCCcchHHH-hhcc---CCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 3445788899999999887 4432 25778888888789999986654569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+...+....
T Consensus 123 dl~p~nili~~~~~~~l~df~~~~~~~~~~~------------------------------------------------- 153 (283)
T cd05118 123 DLKPENLLINTEGVLKLADFGLARSFGSPVR------------------------------------------------- 153 (283)
T ss_pred CcCHHHEEECCCCcEEEeeeeeeEecCCCcc-------------------------------------------------
Confidence 9999999999999999999998743322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......++.+|+|||.+.+. .++.++|||||||++|+|
T Consensus 154 -----------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l 192 (283)
T cd05118 154 -----------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAEL 192 (283)
T ss_pred -----------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHH
Confidence 00013468899999998776 689999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccC---------------------C----C----chhhhcCchhHHHHHHcCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV---------------------L----P----PQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~---------------------~----~----~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
++ ||...... .....+.... . . ........+..+||.+||.++|.+|
T Consensus 193 ~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 271 (283)
T cd05118 193 LSRRPLFPGKSEI-DQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKR 271 (283)
T ss_pred HhCCCCCCCCCHH-HHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccC
Confidence 99 45433322 1111111000 0 0 0011123345599999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
|++.+++.||||
T Consensus 272 p~~~~ll~~~~~ 283 (283)
T cd05118 272 ITAEQALAHPYF 283 (283)
T ss_pred cCHHHHhhCCCC
Confidence 999999999997
No 244
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94 E-value=1.1e-26 Score=243.42 Aligned_cols=207 Identities=17% Similarity=0.149 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.+.|||++.+++ ++... ....+++++|+ .|++|.+++.+....+++.++..++.||+.||+|||++||+|
T Consensus 55 ~e~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H 132 (284)
T cd05079 55 KEIEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVH 132 (284)
T ss_pred HHHHHHHhCCCCCeeeeee-EEecC-CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4556789999999999877 54332 23345666666 699999999555445899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||+++........ ..
T Consensus 133 ~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------~~ 167 (284)
T cd05079 133 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEY---------------------------------------------YT 167 (284)
T ss_pred cccchheEEEcCCCCEEECCCccccccccCccc---------------------------------------------ee
Confidence 999999999999999999999988543211000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 168 ------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el 205 (284)
T cd05079 168 ------------------------------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYEL 205 (284)
T ss_pred ------------------------------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhh
Confidence 00003456789999999888899999999999999999
Q ss_pred hCCCCCCh-----------------hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FCPFSTGE-----------------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~pf~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++...+.. ........+......+......+...+|+.+||+.+|.+|||+.+++++
T Consensus 206 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 206 LTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred hcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 98221110 0011111111122222222234556699999999999999999999873
No 245
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=5.1e-27 Score=243.32 Aligned_cols=203 Identities=16% Similarity=0.199 Sum_probs=148.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..++|||++++++ .+.. ...+++++|+ .+++|.+++.... .+++..+..++.||+.||+|||+.||+|
T Consensus 55 ~e~~~l~~~~h~~ii~~~~-~~~~---~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 129 (267)
T cd06646 55 QEIFMVKECKHCNIVAYFG-SYLS---REKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSKGKMH 129 (267)
T ss_pred HHHHHHHhcCCCCeeeeeE-EEEe---CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3556788899999999887 4422 2356777777 6889999985443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||+|+||+++.++.++++|||++........
T Consensus 130 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 161 (267)
T cd06646 130 RDIKGANILLTDNGDVKLADFGVAAKITATIA------------------------------------------------ 161 (267)
T ss_pred cCCCHHHEEECCCCCEEECcCccceeeccccc------------------------------------------------
Confidence 99999999999999999999998843211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll 262 (712)
......|+..|+|||.+. ...++.++|||||||++
T Consensus 162 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il 199 (267)
T cd06646 162 ------------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITA 199 (267)
T ss_pred ------------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHH
Confidence 000135788999999884 34478899999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhh---hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
|||++ ||..................++... .......+|+.+||..+|++|||++++|+|+|
T Consensus 200 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 200 IELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99998 4433222111111111111112111 12235559999999999999999999999987
No 246
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.94 E-value=1.7e-26 Score=241.61 Aligned_cols=204 Identities=17% Similarity=0.224 Sum_probs=151.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++++++ ++. .....++++++.+++|.+++.... ..+++..++.++.||+.||+|||++|++|+
T Consensus 48 E~~~l~~l~~~~iv~~~~-~~~---~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~ 123 (283)
T cd07835 48 EISLLKELNHPNIVRLLD-VVH---SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHR 123 (283)
T ss_pred HHHHHHhcCCCCccCHhh-eec---cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCC
Confidence 445788899999999888 443 235678888887789999984433 358999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+...+....
T Consensus 124 dl~p~nil~~~~~~~~l~df~~~~~~~~~~~------------------------------------------------- 154 (283)
T cd07835 124 DLKPQNLLIDREGALKLADFGLARAFGVPVR------------------------------------------------- 154 (283)
T ss_pred CCCHHHEEEcCCCcEEEeecccccccCCCcc-------------------------------------------------
Confidence 9999999999999999999998843321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+. .++.++|||||||++|+|
T Consensus 155 -----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l 193 (283)
T cd07835 155 -----------------------------------------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEM 193 (283)
T ss_pred -----------------------------------------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHH
Confidence 00002457889999988765 478999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccC-------------------C----Cch----hhhcCchhHHHHHHcCCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV-------------------L----PPQ----LLLKFPKEASFCLWLLHPEPSGRPK 315 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~-------------------~----~~~----~~~~~~~~~~li~~~L~~dP~~Rpt 315 (712)
++ ||................. . ... .....+...+++.+||+.+|.+|||
T Consensus 194 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 273 (283)
T cd07835 194 VNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS 273 (283)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC
Confidence 99 5543332221111111000 0 000 1112234558999999999999999
Q ss_pred HHHHhcCcCC
Q 005147 316 MGELLQSEFL 325 (712)
Q Consensus 316 ~~eiL~hp~~ 325 (712)
+.++++||||
T Consensus 274 ~~~il~~~~~ 283 (283)
T cd07835 274 AKAALQHPYF 283 (283)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 247
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.94 E-value=1.6e-26 Score=244.91 Aligned_cols=222 Identities=15% Similarity=0.154 Sum_probs=157.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..++||||+++++ .+. ....+++++|+ .|++|.+++...+ .+++..+..++.||+.||.|||+.||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H 124 (305)
T cd05609 50 VERDILTFAENPFVVSMFC-SFE---TKRHLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIVH 124 (305)
T ss_pred HHHHHHHhCCCCCeeeeEE-EEe---cCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3445778899999999887 442 23467778877 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++..+.++++|||.++.......... +
T Consensus 125 ~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------~-------------- 160 (305)
T cd05609 125 RDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL------------------------------Y-------------- 160 (305)
T ss_pred cCCchHHEEECCCCCEEEeeCCCccccCcCccccc------------------------------c--------------
Confidence 99999999999999999999998743111000000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+..... ...........|+..|+|||.+.+..++.++|||||||++|||
T Consensus 161 ------------------------~~~~~~-------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el 209 (305)
T cd05609 161 ------------------------EGHIEK-------DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 209 (305)
T ss_pred ------------------------cccccc-------chhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHH
Confidence 000000 0000000013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccC--CCchhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~~ 329 (712)
++ ||..... ........... .|.......+...+++.+||+.+|.+||+ +.++|+||||....
T Consensus 210 ~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 210 LVGCVPFFGDTP-EELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred HhCCCCCCCCCH-HHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 99 6654332 23333332221 22221222344569999999999999997 79999999997653
No 248
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.94 E-value=2.4e-26 Score=240.55 Aligned_cols=202 Identities=19% Similarity=0.209 Sum_probs=147.7
Q ss_pred eccCCCCCccccccccccccc-ccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~-~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+..++|+|++++++.+...+. ....+++++++.+++|.+++... ...+++..++.++.||+.||.|||+.||+|+||+
T Consensus 55 l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~ 134 (287)
T cd07838 55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLK 134 (287)
T ss_pred hhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence 445679999998883332221 12247888888777999988443 3358999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.++++|||.+........
T Consensus 135 ~~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 162 (287)
T cd07838 135 PQNILVTSDGQVKIADFGLARIYSFEMA---------------------------------------------------- 162 (287)
T ss_pred hhhEEEccCCCEEEeccCcceeccCCcc----------------------------------------------------
Confidence 9999999999999999998743311100
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
.....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 163 ---------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~ 203 (287)
T cd07838 163 ---------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR 203 (287)
T ss_pred ---------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCC
Confidence 000246788999999998889999999999999999998
Q ss_pred -CCCCChhhHHHHHhhccc------------------CCC----ch----hhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 268 -PFSTGEEKTRTMSSLRHR------------------VLP----PQ----LLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~------------------~~~----~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
||...... .....+... .++ .. .....+...++|.+||..||.+||++.+++
T Consensus 204 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 204 PLFRGTSEA-DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred CcccCCChH-HHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 34332222 111111100 000 00 011123445899999999999999999999
Q ss_pred cCcCC
Q 005147 321 QSEFL 325 (712)
Q Consensus 321 ~hp~~ 325 (712)
+||||
T Consensus 283 ~~~~~ 287 (287)
T cd07838 283 QHPYF 287 (287)
T ss_pred cCcCC
Confidence 99997
No 249
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.94 E-value=1.8e-26 Score=237.57 Aligned_cols=202 Identities=20% Similarity=0.240 Sum_probs=154.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCC--------CCCCChhHHHHHHHHHHHHHHHh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~--------~~~l~~~~~~~i~~qil~~l~~l 98 (712)
+...+..+.|+|++++++ ++.. ...+++++++. |++|.+++... ...+++.++..++.||+.||+||
T Consensus 46 e~~~l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 121 (262)
T cd00192 46 EARVMKKLGHPNVVRLLG-VCTE---EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121 (262)
T ss_pred HHHHHhhcCCCChheeee-eecC---CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 445678888999999887 4433 45677777775 99999999654 35689999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+|+||||+||+++.++.++++|||.+........ +
T Consensus 122 H~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------~------- 161 (262)
T cd00192 122 ASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY---------------------------------Y------- 161 (262)
T ss_pred HcCCcccCccCcceEEECCCCcEEEcccccccccccccc---------------------------------c-------
Confidence 999999999999999999999999999998854322100 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.......++..|+|||.+.+..++.++|||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 193 (262)
T cd00192 162 ------------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSF 193 (262)
T ss_pred ------------------------------------------------ccccCCCcCccccCHHHhccCCcchhhccHHH
Confidence 00001345788999999988889999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||++|+|++ ||.... .......+.............+...+++.+||..+|.+|||+.+++++
T Consensus 194 G~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 194 GVLLWEIFTLGATPYPGLS-NEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 999999987 444332 223333443333333333334566699999999999999999999874
No 250
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.94 E-value=9.7e-27 Score=240.17 Aligned_cols=213 Identities=17% Similarity=0.200 Sum_probs=156.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++++++ .+. ....+++++++ .|++|.+++.+.+ .+++..+..++.||+.||.|||++||+|+
T Consensus 43 e~~~l~~~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~ 117 (265)
T cd05579 43 ERDILSQAQSPYVVKLYY-SFQ---GKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHR 117 (265)
T ss_pred HHHHHHhCCCcchhHHHH-hee---cCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecC
Confidence 345688899999999877 442 23456777777 5889999996544 58999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||++......... ..
T Consensus 118 di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~--------------- 151 (265)
T cd05579 118 DLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI-------------------------------NL--------------- 151 (265)
T ss_pred CCCHHHeEEcCCCCEEEEecccchhcccCccc-------------------------------cc---------------
Confidence 99999999999999999999987432111000 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
...........++..|+|||.+.+..++.++||||||+++|+|+
T Consensus 152 ------------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~ 195 (265)
T cd05579 152 ------------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL 195 (265)
T ss_pred ------------------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence 00000001145788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccC-CCchhhhcCchhHHHHHHcCCCCCCCCCCH---HHHhcCcCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 328 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~eiL~hp~~~~~ 328 (712)
+ ||...... .....+.... .++......+...+|+.+||+.+|.+|||+ .++|+||||+..
T Consensus 196 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 196 VGIPPFHGETPE-EIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred hCCCCCCCCCHH-HHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 8 55444332 2222222222 222222224555699999999999999999 999999999854
No 251
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.94 E-value=7.8e-27 Score=249.92 Aligned_cols=216 Identities=19% Similarity=0.166 Sum_probs=149.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++.. ...+++++++ .+++|.+++.+. ...+++..++.++.||+.||+|||++||+
T Consensus 48 ~e~~~~~~l~h~niv~~~~-~~~~---~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 48 NEVVLSHFFRHPNIMTSWT-VFTT---GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred HHHHHHHhCCCCCcceEee-eEec---CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3445677799999999888 5532 3356666666 688999998543 33489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++||+.+...... .+..+
T Consensus 124 HrDlkp~Nill~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~--------- 159 (328)
T cd08226 124 HRNIKASHILISGDGLVSLSGLSHLYSLVRN-----------------------------------GQKAK--------- 159 (328)
T ss_pred cCCCCHHHEEEeCCCcEEEechHHHhhhhcc-----------------------------------Ccccc---------
Confidence 9999999999999999999988754211000 00000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvll 262 (712)
. ..+ .+ ....++..|+|||++.+. .++.++|||||||++
T Consensus 160 ------------~----------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l 200 (328)
T cd08226 160 ------------V----------VYD--------------FP---QFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITA 200 (328)
T ss_pred ------------c----------ccc--------------cc---ccccCccCccChhhhcCCCCCCCchhhHHHHHHHH
Confidence 0 000 00 002345679999999764 378999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---------------------------------------------chhhhc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---------------------------------------------PQLLLK 294 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~ 294 (712)
|+|++ ||............+....+. +.....
T Consensus 201 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (328)
T cd08226 201 CELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTF 280 (328)
T ss_pred HHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhh
Confidence 99998 554333222222221111000 000111
Q ss_pred CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.+...+|+.+||..||++|||+.++|+||||....
T Consensus 281 ~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~ 315 (328)
T cd08226 281 SPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK 315 (328)
T ss_pred hHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence 23455999999999999999999999999997543
No 252
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94 E-value=1.1e-26 Score=242.32 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=147.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------CCCChhHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------~~l~~~~~~~i~~qil~~l~ 96 (712)
++..+++.++||||+++++ .+. .....++++|+ .+++|.+++.+.. ..++...++.++.||+.||+
T Consensus 58 ~e~~~l~~l~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 133 (277)
T cd05062 58 NEASVMKEFNCHHVVRLLG-VVS---QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMA 133 (277)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEc---CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 3456788899999999887 442 22356667766 6899999984321 22567788999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||+.|++|+||||+||+++.++.++++|||++.........
T Consensus 134 ~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------- 175 (277)
T cd05062 134 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------------------------------- 175 (277)
T ss_pred HHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee--------------------------------------
Confidence 999999999999999999999999999999987433211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
.......++..|+|||.+.+..++.++|||
T Consensus 176 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05062 176 --------------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVW 205 (277)
T ss_pred --------------------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhHHH
Confidence 000002357789999999988899999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||++|||++ ||..... ......+.....+.......+...+++.+||+.+|.+|||+.+++++
T Consensus 206 slG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 206 SFGVVLWEIATLAEQPYQGMSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999987 4543322 23333333332222222233445699999999999999999999863
No 253
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.94 E-value=1.7e-26 Score=241.21 Aligned_cols=202 Identities=14% Similarity=0.087 Sum_probs=148.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..++..+.||||+.+++ .+. ....+++++++.+++|.+++......+++.+++.++.||+.||.|||++||+||
T Consensus 58 ~e~~~l~~~~~~~i~~~~~-~~~---~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~ 133 (279)
T cd05109 58 DEAYVMAGVGSPYVCRLLG-ICL---TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHR 133 (279)
T ss_pred HHHHHHHhcCCCCCceEEE-EEc---CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 4455678899999999887 332 223445555557999999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||++..++.+|++|||+++........ +
T Consensus 134 dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~--------------------------------~--------------- 166 (279)
T cd05109 134 DLAARNVLVKSPNHVKITDFGLARLLDIDETE--------------------------------Y--------------- 166 (279)
T ss_pred ccccceEEEcCCCcEEECCCCceeecccccce--------------------------------e---------------
Confidence 99999999999999999999988543211000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 167 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~ 205 (279)
T cd05109 167 -----------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELM 205 (279)
T ss_pred -----------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 000012356799999998888999999999999999998
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+.....++......+...+++.+||..||+.||++.+++.
T Consensus 206 t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 206 TFGAKPYDGIPA-REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred cCCCCCCCCCCH-HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 6 4433222 2222333333333333334455669999999999999999999985
No 254
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94 E-value=2.2e-26 Score=239.18 Aligned_cols=205 Identities=13% Similarity=0.085 Sum_probs=147.5
Q ss_pred cceeeccCCCCCccccccccccccc--ccCceEEEEee-CCccHHHhhcC-----CCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
+..+++.++|+||+++++..+.... .....++++++ .+++|.+++.. ....+++..++.++.||+.||+|||
T Consensus 50 E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 129 (272)
T cd05075 50 EAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS 129 (272)
T ss_pred HHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4456888999999998873322211 11234444454 68999998721 2234789999999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
++||+||||||+||+++.++.++++|||+++........
T Consensus 130 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 168 (272)
T cd05075 130 SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY----------------------------------------- 168 (272)
T ss_pred HCCeeccccchhheEEcCCCCEEECCCCcccccCcccce-----------------------------------------
Confidence 999999999999999999999999999988543211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
. ......+++.|+|||.+.+..++.++||||||
T Consensus 169 ---------------------------~--------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG 201 (272)
T cd05075 169 ---------------------------R--------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSFG 201 (272)
T ss_pred ---------------------------e--------------------cCCcccCCcccCCHHHccCCCcChHHHHHHHH
Confidence 0 00002346779999999888899999999999
Q ss_pred HHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 260 vll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++|||++ ||.... .......+.....++..........+++.+||..+|.+|||+.++++
T Consensus 202 ~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 202 VTMWEIATRGQTPYPGVE-NSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred HHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999987 454332 23344444444333322233344569999999999999999999986
No 255
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.94 E-value=2.3e-26 Score=242.44 Aligned_cols=205 Identities=17% Similarity=0.195 Sum_probs=151.7
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP 110 (712)
+...+|+|++.+++ .+.+ ...+++++++.+++|..++......+++..+..++.||+.||.|||+ .||+||||+|
T Consensus 68 ~~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p 143 (296)
T cd06618 68 LKSHDCPYIVKCYG-YFIT---DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKP 143 (296)
T ss_pred HhccCCCchHhhhe-eeec---CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcH
Confidence 34457999999888 4432 33578889998888888775544568999999999999999999997 5999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+||+++.++.++|+|||.+.......
T Consensus 144 ~nill~~~~~~kL~dfg~~~~~~~~~------------------------------------------------------ 169 (296)
T cd06618 144 SNILLDASGNVKLCDFGISGRLVDSK------------------------------------------------------ 169 (296)
T ss_pred HHEEEcCCCCEEECccccchhccCCC------------------------------------------------------
Confidence 99999999999999999874321110
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHHHHHHhh
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELF 266 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+.. ++.++|||||||++|+|+
T Consensus 170 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~ 212 (296)
T cd06618 170 -------------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELA 212 (296)
T ss_pred -------------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHH
Confidence 000024678899999987553 889999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchh--hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+ ||..................+... ........+|+.+||..+|.+||++.++++||||......
T Consensus 213 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 282 (296)
T cd06618 213 TGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETA 282 (296)
T ss_pred hCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchh
Confidence 9 554433322333222222211111 1123445699999999999999999999999999976543
No 256
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.94 E-value=1.6e-26 Score=237.23 Aligned_cols=208 Identities=22% Similarity=0.226 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...++.++|+|++++++ .+.... ...+++++|+. +++|.+++.+.. .+++.++..++.|++.||.|||+.|++|
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h 124 (260)
T cd06606 48 REIRILSSLQHPNIVRYYG-SERDEE-KNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVH 124 (260)
T ss_pred HHHHHHHHcCCCCEeeEEE-EEecCC-CCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3445788899999999887 332221 24567777774 999999995544 6899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.........
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------- 157 (260)
T cd06606 125 RDIKGANILVDSDGVVKLADFGCAKRLGDIETG----------------------------------------------- 157 (260)
T ss_pred cCCCHHHEEEcCCCCEEEcccccEEeccccccc-----------------------------------------------
Confidence 999999999999999999999987433211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||.+.+..++.++||||||+++|+|
T Consensus 158 -----------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l 196 (260)
T cd06606 158 -----------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEM 196 (260)
T ss_pred -----------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence 000013568899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||.........+..+......+..+. ......+|+.+||..+|.+||++.++++||||
T Consensus 197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 197 ATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 99 55544433333333333222222222 23455599999999999999999999999997
No 257
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94 E-value=1.4e-26 Score=238.58 Aligned_cols=201 Identities=17% Similarity=0.204 Sum_probs=149.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|+|++++++ ++. ....+++++|+ .|++|.+++......+++..++.++.||+.||.|||++||+||
T Consensus 49 e~~~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 124 (256)
T cd05059 49 EAKVMMKLSHPNLVQLYG-VCT---KQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHR 124 (256)
T ss_pred HHHHHHhCCCCCEEEEEE-EEc---CCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 455788899999999877 442 22356677776 5999999996544468999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.++........ +
T Consensus 125 dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------------~ 157 (256)
T cd05059 125 DLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-----------------------------------------------S 157 (256)
T ss_pred cccHhhEEECCCCcEEECCcccceeccccccc-----------------------------------------------c
Confidence 99999999999999999999987433211000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 158 ------------------------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~ 195 (256)
T cd05059 158 ------------------------------------------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred ------------------------------------------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHh
Confidence 00012345799999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||..... ......+.....+.......+...+++.+||..+|++|||+.++++.
T Consensus 196 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 196 SEGKMPYERFSN-SEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ccCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 7 4543332 22333333332222222234456699999999999999999999873
No 258
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.94 E-value=1.7e-26 Score=242.53 Aligned_cols=202 Identities=19% Similarity=0.184 Sum_probs=149.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC------------CCCChhHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------RSVDVYECLHIFRQIVE 93 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~------------~~l~~~~~~~i~~qil~ 93 (712)
++..++..+.|||++++++ ++. ....+++++|+ .+++|.+++.... ..+++..++.++.||+.
T Consensus 56 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~ 131 (288)
T cd05093 56 REAELLTNLQHEHIVKFYG-VCV---EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAA 131 (288)
T ss_pred HHHHHHHhCCCCCcceEEE-EEe---cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 3555788899999999887 443 23456667666 6899999985322 24899999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||+|||++||+||||||+||+++.++.++++|||.+........ .
T Consensus 132 aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------~-- 176 (288)
T cd05093 132 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY---------------------------------Y-- 176 (288)
T ss_pred HHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCce---------------------------------e--
Confidence 99999999999999999999999999999999998843211100 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
.......++..|+|||.+.+..++.++
T Consensus 177 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~s 203 (288)
T cd05093 177 -----------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTES 203 (288)
T ss_pred -----------------------------------------------------ecCCCCCccccccCHHHhccCCCCchh
Confidence 000002357789999999888899999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||||++|+|++ ||...... .....+.....+.......+...+|+.+||+.+|.+|||+.+++.
T Consensus 204 DiwslG~il~~l~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 204 DVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999997 44333222 233333333333222223445669999999999999999999865
No 259
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94 E-value=1.8e-26 Score=241.52 Aligned_cols=202 Identities=18% Similarity=0.196 Sum_probs=147.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
.+..++..++||||+++++ ++... ...++++++ .+++|.+++... ...+++..++.++.|
T Consensus 57 ~e~~~~~~l~h~~iv~~~~-~~~~~---~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 132 (283)
T cd05091 57 HEAMMRSRLQHPNIVCLLG-VVTKE---QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQ 132 (283)
T ss_pred HHHHHHhcCCCCCcCeEEE-EEcCC---CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHH
Confidence 3445778899999999887 44222 345566665 689999998321 224788889999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++||+||||||+||+++.++.+|++|||+++........
T Consensus 133 l~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------- 180 (283)
T cd05091 133 IAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYY-------------------------------- 180 (283)
T ss_pred HHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchhe--------------------------------
Confidence 999999999999999999999999999999999999987533111000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
. ......+++.|+|||.+.+..++
T Consensus 181 ------------------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~ 204 (283)
T cd05091 181 ------------------------------------K--------------------LMGNSLLPIRWMSPEAIMYGKFS 204 (283)
T ss_pred ------------------------------------e--------------------eccCccCCccccCHHHHhcCCCC
Confidence 0 00002357789999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||..... ......+.....++..........+++..||+.+|.+||++.+|++
T Consensus 205 ~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 205 IDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 99999999999999997 4443322 2334444443333222223334559999999999999999999987
No 260
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.94 E-value=1.5e-26 Score=238.45 Aligned_cols=198 Identities=15% Similarity=0.126 Sum_probs=146.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+|++++++.++. .....++++|+ .+++|.+++.+.. ..+++..++.++.||+.||.|||++||+
T Consensus 48 ~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 124 (256)
T cd05082 48 AEASVMTQLRHSNLVQLLGVIVE---EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFV 124 (256)
T ss_pred HHHHHHHhCCCCCeeeEEEEEEc---CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 34557888999999998873332 22345667776 5889999995433 3478999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+|++|||++.......
T Consensus 125 H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------ 156 (256)
T cd05082 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ------------------------------------------------ 156 (256)
T ss_pred ccccchheEEEcCCCcEEecCCccceeccccC------------------------------------------------
Confidence 99999999999999999999999874321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
....++..|+|||.+.+..++.++|||||||++|+
T Consensus 157 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~ 191 (256)
T cd05082 157 ---------------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 191 (256)
T ss_pred ---------------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHH
Confidence 00123557999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||.... .......+.....+.......+...+++.+||..+|.+|||+.++++
T Consensus 192 l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 192 IYSFGRVPYPRIP-LKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHhCCCCCCCCCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 986 454322 22233333333222222223345569999999999999999999975
No 261
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94 E-value=2.4e-26 Score=236.85 Aligned_cols=200 Identities=17% Similarity=0.204 Sum_probs=149.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++|||++++++ ++.. ...+++++++ .|++|.+++......+++..++.++.||+.||+|||++||+||
T Consensus 49 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 124 (256)
T cd05114 49 EAKVMMKLSHPKLVQLYG-VCTQ---QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHR 124 (256)
T ss_pred HHHHHHHCCCCCceeEEE-EEcc---CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 445788899999999887 4432 3457777777 5899999996544458999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.++........
T Consensus 125 dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~------------------------------------------------ 156 (256)
T cd05114 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT------------------------------------------------ 156 (256)
T ss_pred ccCcceEEEcCCCeEEECCCCCccccCCCcee------------------------------------------------
Confidence 99999999999999999999987432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 157 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~ 195 (256)
T cd05114 157 -----------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred -----------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHH
Confidence 000022456799999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.....+...........+++.+||..+|.+||++.++++
T Consensus 196 ~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 196 TEGKMPFEKKSNY-EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred cCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 8 45433322 333333333222222222344569999999999999999999986
No 262
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.94 E-value=3.1e-26 Score=236.69 Aligned_cols=208 Identities=21% Similarity=0.261 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|+||+.+++ .. .....+++++|+ .+++|.+++.+.. .+++..++.++.||+.||.|||+.||+|
T Consensus 48 ~e~~~~~~l~~~~i~~~~~-~~---~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~i~H 122 (264)
T cd06626 48 DEMKVLELLKHPNLVKYYG-VE---VHREKVYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSHGIVH 122 (264)
T ss_pred HHHHHHHhCCCCChhheee-eE---ecCCEEEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3445788899999999887 32 233456777777 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++..........+ .
T Consensus 123 ~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~-----------------------------~--------------- 158 (264)
T cd06626 123 RDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG-----------------------------E--------------- 158 (264)
T ss_pred CCCCHHHEEECCCCCEEEcccccccccCCCCCccc-----------------------------c---------------
Confidence 99999999999999999999998854322100000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvll 262 (712)
......++..|+|||.+.+.. ++.++|||||||++
T Consensus 159 ------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il 196 (264)
T cd06626 159 ------------------------------------------EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVV 196 (264)
T ss_pred ------------------------------------------cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHH
Confidence 000034678899999998766 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhh--cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||............+.....+..... ..+...+|+.+||+.+|.+|||+.+++.|||+
T Consensus 197 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 197 LEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 99998 66544322222222222222211111 24555699999999999999999999999996
No 263
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.94 E-value=1.7e-26 Score=236.07 Aligned_cols=202 Identities=18% Similarity=0.261 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...++.++|+|++.+++ .+... ...++++++ .|++|.+++......+++..+..++.||+.||.|||..|++|
T Consensus 46 ~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h 121 (253)
T cd05122 46 NEIQILKKCKHPNIVKYYG-SYLKK---DELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121 (253)
T ss_pred HHHHHHHhCCCCCEeEEEE-EEecC---CeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEec
Confidence 4455788899999999887 44222 445666666 679999999665456899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++|+|||.+...+....
T Consensus 122 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------ 153 (253)
T cd05122 122 RDIKAANILLTSDGEVKLIDFGLSAQLSDTKA------------------------------------------------ 153 (253)
T ss_pred CCCCHHHEEEccCCeEEEeecccccccccccc------------------------------------------------
Confidence 99999999999999999999998744322100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....++..|+|||.+.+..++.++|+||||+++|+|
T Consensus 154 -------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l 190 (253)
T cd05122 154 -------------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIEL 190 (253)
T ss_pred -------------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHH
Confidence 0013568889999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc--CchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK--FPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
++ ||........... ......+...... .....+++.+||..+|++|||+.++++|||
T Consensus 191 ~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 191 AEGKPPYSELPPMKALFK-IATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HhCCCCCCCCchHHHHHH-HHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99 5544322222222 2222222221111 344569999999999999999999999998
No 264
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.94 E-value=1.5e-26 Score=238.99 Aligned_cols=207 Identities=22% Similarity=0.231 Sum_probs=158.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
.+...+..+.|+|++++++ ++.. ...+++++++ .+++|.+++... ..+++..+..++.||++||+|||+ +|++
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~ 122 (264)
T cd06623 48 RELKTLRSCESPYVVKCYG-AFYK---EGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHII 122 (264)
T ss_pred HHHHHHHhcCCCCeeeEEE-EEcc---CCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 4445677788999999887 4422 2456666666 679999999554 458999999999999999999999 9999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||.+.........
T Consensus 123 H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~---------------------------------------------- 156 (264)
T cd06623 123 HRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ---------------------------------------------- 156 (264)
T ss_pred cCCCCHHHEEECCCCCEEEccCccceecccCCCc----------------------------------------------
Confidence 9999999999999999999999987433111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....++..|+|||.+.+..++.++|+||||+++|+
T Consensus 157 --------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~ 192 (264)
T cd06623 157 --------------------------------------------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLE 192 (264)
T ss_pred --------------------------------------------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHH
Confidence 001356888999999988889999999999999999
Q ss_pred hhC---CCCCCh--hhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||.... ........+.....+..... ......+++.+||..+|++|||+.++++||||+..
T Consensus 193 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 193 CALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999 554432 33334444444333333333 23455599999999999999999999999999754
No 265
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.94 E-value=2.1e-26 Score=242.23 Aligned_cols=201 Identities=19% Similarity=0.201 Sum_probs=149.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQI 91 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi 91 (712)
+...++.++|+||+++++ ++. ....+++++++ .+++|.+++... ...+++..++.++.||
T Consensus 57 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i 132 (291)
T cd05094 57 EAELLTNLQHEHIVKFYG-VCG---DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 132 (291)
T ss_pred HHHHHhcCCCCCcceEEE-EEc---cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHH
Confidence 445688899999999887 443 23456777776 699999999432 1347889999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||.|||++||+||||||+||+++.++.++++|||++.........
T Consensus 133 ~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~--------------------------------- 179 (291)
T cd05094 133 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY--------------------------------- 179 (291)
T ss_pred HHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCcee---------------------------------
Confidence 99999999999999999999999999999999999988433211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
.......++..|+|||.+.+..++.
T Consensus 180 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 204 (291)
T cd05094 180 -------------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTT 204 (291)
T ss_pred -------------------------------------------------------ecCCCCCcceeecChHHhccCCCCc
Confidence 0000134578899999999888999
Q ss_pred ccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 252 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++|||||||++|||++ ||...... .....+.....+...........+++.+||+.+|.+|||+.++++
T Consensus 205 ~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 205 ESDVWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 9999999999999997 44333322 233333343333222223345569999999999999999999976
No 266
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.94 E-value=2.7e-26 Score=237.67 Aligned_cols=207 Identities=16% Similarity=0.150 Sum_probs=153.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|+|++++++ .+.+ .....+++++|+ .+++|.+++...+ .+++..++.++.||+.||.|||++||+|
T Consensus 53 ~ei~~l~~l~h~~i~~~~~-~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~i~H 129 (264)
T cd06653 53 CEIQLLKNLRHDRIVQYYG-CLRD-PEEKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNMIVH 129 (264)
T ss_pred HHHHHHHHcCCCCcceEEE-EEEc-CCCCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 4556888999999999887 3322 223446666666 6899999985544 3889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||+++........ +.
T Consensus 130 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~-------------- 164 (264)
T cd06653 130 RDIKGANILRDSAGNVKLGDFGASKRIQTICMS-------------------------------GT-------------- 164 (264)
T ss_pred CCCCHHHEEEcCCCCEEECcccccccccccccc-------------------------------Cc--------------
Confidence 999999999999999999999988532110000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|+|||||++|+|
T Consensus 165 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 202 (264)
T cd06653 165 ------------------------------------------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM 202 (264)
T ss_pred ------------------------------------------cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||............ .....++..+.. .+...+++.+||. +|..|||+.+++.|||.
T Consensus 203 ~~g~~p~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 203 LTEKPPWAEYEAMAAIFKI-ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HhCCCCCCccCHHHHHHHH-HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 98 55443333333322 222222223333 3455699999999 57999999999999984
No 267
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.94 E-value=2.8e-26 Score=246.27 Aligned_cols=223 Identities=17% Similarity=0.183 Sum_probs=158.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++|+|++.+++ ++. ....+++++|+.+++|.+++... ..+++..+..++.||+.||.|||+.||+|+
T Consensus 69 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~ 143 (335)
T PTZ00024 69 RELKIMNEIKHENIMGLVD-VYV---EGDFINLVMDIMASDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHR 143 (335)
T ss_pred HHHHHHHhCCCcceeeeeE-EEe---cCCcEEEEEeccccCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 3455788899999999888 442 33578899999888999999544 348999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+...+.......... +.+.
T Consensus 144 dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~--------------------------~~~~------------- 184 (335)
T PTZ00024 144 DLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK--------------------------DETM------------- 184 (335)
T ss_pred cccHHHeEECCCCCEEECCccceeecccccccccccc--------------------------cccc-------------
Confidence 9999999999999999999998865543211100000 0000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
..........++..|+|||.+.+.. ++.++|||||||++|+|
T Consensus 185 -------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 185 -------------------------------------QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred -------------------------------------cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHH
Confidence 0000001134688999999987654 79999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc---cC--------------------CCchh----hhcCchhHHHHHHcCCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH---RV--------------------LPPQL----LLKFPKEASFCLWLLHPEPSGRPK 315 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~---~~--------------------~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt 315 (712)
++ ||...... ..+..+.. .. .+... ........++|.+||..+|++|||
T Consensus 228 ~tg~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s 306 (335)
T PTZ00024 228 LTGKPLFPGENEI-DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS 306 (335)
T ss_pred HhCCCCCCCCCHH-HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC
Confidence 99 44433322 22211111 00 00101 111234459999999999999999
Q ss_pred HHHHhcCcCCCCCcCc
Q 005147 316 MGELLQSEFLNEPRDS 331 (712)
Q Consensus 316 ~~eiL~hp~~~~~~~~ 331 (712)
++++|.||||+.....
T Consensus 307 ~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 307 AKEALKHEYFKSDPLP 322 (335)
T ss_pred HHHHhcCcccCCCCCC
Confidence 9999999999976543
No 268
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.94 E-value=1.9e-26 Score=244.15 Aligned_cols=201 Identities=15% Similarity=0.151 Sum_probs=144.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC------------------CCCChhHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------------RSVDVYECLHIF 88 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~------------------~~l~~~~~~~i~ 88 (712)
+..+|..+.||||+++++ ++.+ ...+++++|+ .+++|.+++.... ..+++.++..|+
T Consensus 69 E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 144 (304)
T cd05096 69 EVKILSRLKDPNIIRLLG-VCVD---EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVA 144 (304)
T ss_pred HHHHHhhcCCCCeeEEEE-EEec---CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHH
Confidence 445688899999999888 4432 2457778877 5899999883321 236778899999
Q ss_pred HHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccc
Q 005147 89 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 168 (712)
Q Consensus 89 ~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (712)
.||+.||.|||++||+||||||+||+++.++.+|++|||+++.......
T Consensus 145 ~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~------------------------------- 193 (304)
T cd05096 145 LQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY------------------------------- 193 (304)
T ss_pred HHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce-------------------------------
Confidence 9999999999999999999999999999999999999998843211100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC
Q 005147 169 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 248 (712)
Q Consensus 169 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 248 (712)
+ . ......++..|+|||++.+..
T Consensus 194 --~-----------------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~ 216 (304)
T cd05096 194 --Y-----------------------------------R--------------------IQGRAVLPIRWMAWECILMGK 216 (304)
T ss_pred --e-----------------------------------E--------------------ecCcCCCCccccCHHHHhcCC
Confidence 0 0 000124577899999998888
Q ss_pred CCCccchHHHHHHHHHhhC-----CCCCChhhHHHHHhh----cc---cCCCchhhhcCchhHHHHHHcCCCCCCCCCCH
Q 005147 249 VSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----RH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 249 ~~~~sDIwSlGvll~eLl~-----pf~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (712)
++.++|||||||++|||++ ||...... ...... .. ...+...........+|+.+||..+|++|||+
T Consensus 217 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 217 FTTASDVWAFGVTLWEILMLCKEQPYGELTDE-QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred CCchhhhHHHHHHHHHHHHccCCCCCCcCCHH-HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCH
Confidence 9999999999999999985 45433221 111111 11 11111112223445699999999999999999
Q ss_pred HHHhc
Q 005147 317 GELLQ 321 (712)
Q Consensus 317 ~eiL~ 321 (712)
.+|.+
T Consensus 296 ~~i~~ 300 (304)
T cd05096 296 SDIHA 300 (304)
T ss_pred HHHHH
Confidence 99954
No 269
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.94 E-value=2.3e-26 Score=242.06 Aligned_cols=209 Identities=18% Similarity=0.237 Sum_probs=152.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||++++++ ++. ....+++++|+.+++|.+++.. ....+++..+..++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 125 (294)
T PLN00009 50 REISLLKEMQHGNIVRLQD-VVH---SEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLH 125 (294)
T ss_pred HHHHHHHhccCCCEeeEEE-EEe---cCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 3556788899999999888 442 2357888899988899988844 3333678888999999999999999999999
Q ss_pred ccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 106 HNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 106 rDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
+||+|+||+++. ++.+|++|||++...+....
T Consensus 126 ~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 158 (294)
T PLN00009 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVR----------------------------------------------- 158 (294)
T ss_pred CCCCcceEEEECCCCEEEEcccccccccCCCcc-----------------------------------------------
Confidence 999999999985 56799999998844321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
......+++.|+|||.+.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~ 195 (294)
T PLN00009 159 -------------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFA 195 (294)
T ss_pred -------------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00013568899999998764 4789999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcc--c--------------------C-CCch----hhhcCchhHHHHHHcCCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRH--R--------------------V-LPPQ----LLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~--~--------------------~-~~~~----~~~~~~~~~~li~~~L~~dP~~R 313 (712)
+|++ ||............... . . .+.. .....+...+++.+||..+|++|
T Consensus 196 ~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 275 (294)
T PLN00009 196 EMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKR 275 (294)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhC
Confidence 9999 45443332222221110 0 0 0000 01123445589999999999999
Q ss_pred CCHHHHhcCcCCCCCc
Q 005147 314 PKMGELLQSEFLNEPR 329 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~ 329 (712)
|++.++++||||....
T Consensus 276 ps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 276 ITARAALEHEYFKDLG 291 (294)
T ss_pred cCHHHHhcCchHhHHh
Confidence 9999999999998754
No 270
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=2.3e-26 Score=240.86 Aligned_cols=206 Identities=17% Similarity=0.156 Sum_probs=153.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
++..++..++|||++++++ .+... ..+++++|| .+++|.+++.+.+ .+++..++.++.|++.+|.|||+ .||+
T Consensus 52 ~E~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~~i~ 126 (284)
T cd06620 52 RELQIMHECRSPYIVSFYG-AFLNE---NNICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNVHRIM 126 (284)
T ss_pred HHHHHHHHcCCCCcceEee-eEecC---CEEEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHhcCee
Confidence 4455788899999999888 44222 456777777 6889999885543 48999999999999999999997 6999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++......
T Consensus 127 H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~------------------------------------------------- 157 (284)
T cd06620 127 HRDIKPSNILVNSRGQIKLCDFGVSGELINS------------------------------------------------- 157 (284)
T ss_pred ccCCCHHHEEECCCCcEEEccCCcccchhhh-------------------------------------------------
Confidence 9999999999999999999999987321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 158 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~ 194 (284)
T cd06620 158 -------------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIE 194 (284)
T ss_pred -------------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred hhC---CCCCChhh----------HHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEK----------TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||...... ......+.....+..... ..+...+|+.+||..||.+|||+.|+++|+||....
T Consensus 195 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 195 LALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred HHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 998 55433221 111122222211211112 223455999999999999999999999999987643
No 271
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.94 E-value=1.6e-26 Score=243.43 Aligned_cols=206 Identities=16% Similarity=0.196 Sum_probs=153.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..+.|||++.+++ .+.. ....++++|+ .+++|.+++.+. .+++.+++.++.||+.||.|||++|++|+
T Consensus 66 e~~~l~~l~hp~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~ 139 (293)
T cd06647 66 EILVMRENKHPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHR 139 (293)
T ss_pred HHHHHhhcCCCCeeehhh-eeee---CCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeec
Confidence 445678899999999887 4422 2345666666 699999999543 37899999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++........
T Consensus 140 dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------- 170 (293)
T cd06647 140 DIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------- 170 (293)
T ss_pred cCCHHHEEEcCCCCEEEccCcceeccccccc-------------------------------------------------
Confidence 9999999999999999999998743211100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......|++.|+|||.+.+..++.++|+|||||++|+|+
T Consensus 171 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll 209 (293)
T cd06647 171 -----------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209 (293)
T ss_pred -----------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHH
Confidence 000135788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCch-hh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQ-LL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+ ||.......... .+.....+.. .. ...+...+++.+||..+|.+||++.+++.|+||.....
T Consensus 210 ~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 210 EGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred hCCCCCCCCChhhhee-ehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 9 555433322111 1111111111 11 12234558999999999999999999999999997764
No 272
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-27 Score=227.38 Aligned_cols=214 Identities=15% Similarity=0.147 Sum_probs=143.9
Q ss_pred cceeeccCCCCCccccccccccccc-ccC-ceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEA-AID-PFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~-~~~-~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
+.-.-+..+|||++++++-...... ... .|++..+|..|||.+.+. ..+..+++.++++||.+|++||.+||+..
T Consensus 68 Eid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~ 147 (302)
T KOG2345|consen 68 EIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE 147 (302)
T ss_pred HHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC
Confidence 3334566899999998873332222 222 455555668999999882 34446899999999999999999999998
Q ss_pred --ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 103 --IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 103 --IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
++||||||.||+++.++.+++.|||++......-
T Consensus 148 ~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i-------------------------------------------- 183 (302)
T KOG2345|consen 148 PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI-------------------------------------------- 183 (302)
T ss_pred CcccccCCCcceeEecCCCceEEEeccCccccceEe--------------------------------------------
Confidence 9999999999999999999999999985421110
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYR 257 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwS 257 (712)
....+...+.|. ....-|..|+|||.+.-. ..+.++||||
T Consensus 184 -------------------~~~~~a~~lQe~------------------a~e~Ct~pyRAPELf~vk~~~ti~ertDIWS 226 (302)
T KOG2345|consen 184 -------------------EGSRQALRLQEW------------------AEERCTIPYRAPELFNVKSHCTITERTDIWS 226 (302)
T ss_pred -------------------echHHHHHHHHH------------------HHHhCCCcccCchheecccCcccccccchhh
Confidence 000000000000 001237889999998543 3789999999
Q ss_pred HHHHHHHhhC---CCCCChhhH--HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 258 LGVLLFELFC---PFSTGEEKT--RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|||+||+|+. ||......- .+..........|..........++|.+||+.||.+||++.+++.+
T Consensus 227 LGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 227 LGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred hhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 9999999987 665322210 0111111111112222233344599999999999999999999863
No 273
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.94 E-value=4.3e-26 Score=234.91 Aligned_cols=202 Identities=16% Similarity=0.132 Sum_probs=150.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+...++.++|||++.+++ .+.. ..+++++|+ .+++|.+++.+.. ..+++..+..++.||+.||+|||++|++
T Consensus 45 ~e~~~l~~l~h~~iv~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 119 (257)
T cd05040 45 KEAAIMHSLDHENLIRLYG-VVLT----HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFI 119 (257)
T ss_pred HHHHHHhhcCCCCccceeE-EEcC----CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4556788999999999887 4422 556777777 5899999995543 4689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++...+..... +
T Consensus 120 H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------------- 154 (257)
T cd05040 120 HRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--------------------------------Y------------- 154 (257)
T ss_pred ccccCcccEEEecCCEEEeccccccccccccccc--------------------------------e-------------
Confidence 9999999999999999999999988543221000 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
. ......++..|+|||.+.+..++.++|||||||++||
T Consensus 155 ----------------------~--------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~e 192 (257)
T cd05040 155 ----------------------V--------------------MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWE 192 (257)
T ss_pred ----------------------e--------------------cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHH
Confidence 0 0001345778999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||...... .....+.. ...........+...+++.+||..+|++|||+.++++
T Consensus 193 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 193 MFTYGEEPWAGLSGS-QILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 987 44333222 22222222 1111111122345559999999999999999999976
No 274
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.93 E-value=4.3e-26 Score=238.93 Aligned_cols=206 Identities=16% Similarity=0.212 Sum_probs=148.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.+.|+||+.+++ ++.. ...+++++|+.++++.+.+......+++.++..++.||+.||.|||++||+|+
T Consensus 49 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 124 (288)
T cd07833 49 REVKVLRQLRHENIVNLKE-AFRR---KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHR 124 (288)
T ss_pred HHHHHHHhcCCCCeeehhh-eEEE---CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 3455778899999999888 4422 34578888886555555443333448999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+........
T Consensus 125 dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~------------------------------------------------- 155 (288)
T cd07833 125 DIKPENILVSESGVLKLCDFGFARALRARPA------------------------------------------------- 155 (288)
T ss_pred CCCHHHeEECCCCCEEEEeeecccccCCCcc-------------------------------------------------
Confidence 9999999999999999999998743321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
.......++.+|+|||++.+. .++.++||||||+++|+|
T Consensus 156 ----------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l 195 (288)
T cd07833 156 ----------------------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAEL 195 (288)
T ss_pred ----------------------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHH
Confidence 000014578899999999888 789999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhc--cc------------------CCCc---------hhhhc-CchhHHHHHHcCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLLLK-FPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~------------------~~~~---------~~~~~-~~~~~~li~~~L~~dP~~ 312 (712)
++ ||.............. .. ..+. ..... .+...+|+.+||..+|.+
T Consensus 196 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 275 (288)
T cd07833 196 LDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKE 275 (288)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchh
Confidence 99 4443322211111000 00 0000 01111 244559999999999999
Q ss_pred CCCHHHHhcCcCC
Q 005147 313 RPKMGELLQSEFL 325 (712)
Q Consensus 313 Rpt~~eiL~hp~~ 325 (712)
|||+.++++||||
T Consensus 276 Rps~~~il~~~~f 288 (288)
T cd07833 276 RLTCDELLQHPYF 288 (288)
T ss_pred cccHHHHhcCCCC
Confidence 9999999999997
No 275
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.93 E-value=3.1e-26 Score=235.66 Aligned_cols=204 Identities=18% Similarity=0.226 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++|+|++++++ .+.. ...+++++|+ .+++|.+++.. ....+++..++.++.||+.||.|||+.||+
T Consensus 48 ~E~~~l~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (257)
T cd08225 48 KEVILLAKMKHPNIVTFFA-SFQE---NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKIL 123 (257)
T ss_pred HHHHHHHhCCCCChhhhhh-eecc---CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 4555788899999999887 4422 2356677766 59999999944 333579999999999999999999999999
Q ss_pred eccCCCCceeecCCCc-EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~~-vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|+||||+||+++.++. ++++|||.+...+... +.
T Consensus 124 H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~---------------------------------~~------------ 158 (257)
T cd08225 124 HRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM---------------------------------EL------------ 158 (257)
T ss_pred cccCCHHHEEEcCCCCeEEecccccchhccCCc---------------------------------cc------------
Confidence 9999999999987754 6999998774321110 00
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....|++.|+|||.+.+..++.++|+|||||++|
T Consensus 159 ---------------------------------------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~ 193 (257)
T cd08225 159 ---------------------------------------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLY 193 (257)
T ss_pred ---------------------------------------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 00134788899999998888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
+|++ ||......... ........++..........+++.+||..+|++|||+.++++||||
T Consensus 194 ~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 194 ELCTLKHPFEGNNLHQLV-LKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHhCCCCCCCccHHHHH-HHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 9998 55443332222 2233333333222233456699999999999999999999999997
No 276
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.93 E-value=2.5e-26 Score=240.49 Aligned_cols=203 Identities=18% Similarity=0.115 Sum_probs=144.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|+.++|||++++++ ++.. .....+++++|+ .+++|.+++... .+++.+++.++.||+.||+|||++||+||
T Consensus 56 E~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~ 131 (283)
T cd05080 56 EINILKTLYHENIVKYKG-CCSE-QGGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHR 131 (283)
T ss_pred HHHHHHhCCCCCEeeEEE-EEec-CCCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 445788999999999887 4432 233446666666 689999999543 38999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||+++........ +
T Consensus 132 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------~--------------- 164 (283)
T cd05080 132 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y--------------- 164 (283)
T ss_pred ccChheEEEcCCCcEEEeecccccccCCcchh--------------------------------h---------------
Confidence 99999999999999999999988543211000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.. .....++..|+|||.+.+..++.++|||||||++|||+
T Consensus 165 --------------------~~--------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~ 204 (283)
T cd05080 165 --------------------RV--------------------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204 (283)
T ss_pred --------------------cc--------------------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHH
Confidence 00 00012456799999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHH--------------hhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C---PFSTGEEKTRTMS--------------SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ |+.........+. .+.....++..........+++.+||..+|++|||+.++++
T Consensus 205 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 205 THCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 8 4332111111000 00011111111112345559999999999999999999986
No 277
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.93 E-value=1.9e-26 Score=238.63 Aligned_cols=208 Identities=15% Similarity=0.194 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC--CCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~--~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++...|+.++|+|++.+++ .+.. ...+++++++ .|++|.+++... ...+++..++.++.||+.||.|||++||
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i 123 (267)
T cd06610 48 KEVQAMSQCNHPNVVKYYT-SFVV---GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ 123 (267)
T ss_pred HHHHHHHhcCCCCEEEEEE-EEee---CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3344678899999999877 3322 2355666666 689999999442 2458999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+|+||+|+||+++.++.++++|||++.........
T Consensus 124 ~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~--------------------------------------------- 158 (267)
T cd06610 124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR--------------------------------------------- 158 (267)
T ss_pred ecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc---------------------------------------------
Confidence 99999999999999999999999987433211000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll 262 (712)
. .. ......|+..|+|||.+... .++.++|+|||||++
T Consensus 159 ----------------------~------------------~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~ 197 (267)
T cd06610 159 ----------------------T------------------RK-VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITA 197 (267)
T ss_pred ----------------------c------------------cc-ccccccCChhhcChHHHccccCcCcccchHhHhHHH
Confidence 0 00 00114578899999998777 689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchh-----hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||............+.. ..+... ....+...+++.+||..+|.+|||+.++++||||
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 198 IELATGAAPYSKYPPMKVLMLTLQN-DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHhCCCCccccChhhhHHHHhcC-CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 99999 55433332222222222 111110 1122445699999999999999999999999997
No 278
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.93 E-value=2.3e-26 Score=241.94 Aligned_cols=202 Identities=16% Similarity=0.177 Sum_probs=149.7
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---------------CCCCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------------PKRSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---------------~~~~l~~~~~~~i~~q 90 (712)
+..++..+ +|+||+++++ ++.. ...+++++|+ .+++|.+++.. ....+++..++.++.|
T Consensus 65 E~~~l~~l~~h~~i~~~~~-~~~~---~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 140 (293)
T cd05053 65 EMEMMKMIGKHKNIINLLG-VCTQ---EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQ 140 (293)
T ss_pred HHHHHHhhcCCCCeeeEEE-EEcC---CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHH
Confidence 33456666 8999999887 4432 2356777776 68999999842 2345889999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||+.||+||||||+||+++.++.++++|||.++........
T Consensus 141 i~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------- 188 (293)
T cd05053 141 VARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY-------------------------------- 188 (293)
T ss_pred HHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce--------------------------------
Confidence 999999999999999999999999999999999999988543211000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
. ......++..|+|||.+.+..++
T Consensus 189 -------------~-------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 212 (293)
T cd05053 189 -------------R-------------------------------------------KTTNGRLPVKWMAPEALFDRVYT 212 (293)
T ss_pred -------------e-------------------------------------------ccCCCCCCccccCHHHhccCCcC
Confidence 0 00001235679999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.++|||||||++|||++ ||.... .......+.....+.......+...+|+.+||..+|++|||+.+++++
T Consensus 213 ~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 213 HQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred cccceeehhhHHHHHhcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 99999999999999986 554332 223344444443333333344566699999999999999999999874
No 279
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=3.6e-26 Score=234.72 Aligned_cols=204 Identities=21% Similarity=0.273 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..+++.++|+|++.+++.+. .. ..+++++++ .|++|.+++... ...+++.++..++.||+.||.|||++|
T Consensus 48 ~e~~~l~~l~~~~~~~~~~~~~-~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 123 (258)
T cd08215 48 NEVKILKKLNHPNIIKYYESFE-EK---GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123 (258)
T ss_pred HHHHHHHhcCCCChhheEEEEe-cC---CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445688899999999887333 22 556677776 588999999543 356899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
++|+||+|+||+++.++.++++|||.+...+....
T Consensus 124 ~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 158 (258)
T cd08215 124 ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD--------------------------------------------- 158 (258)
T ss_pred EecccCChHHeEEcCCCcEEECCccceeecccCcc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|+||+|+++
T Consensus 159 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~ 193 (258)
T cd08215 159 ---------------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVL 193 (258)
T ss_pred ---------------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||.... .............++..........+++.+||..+|.+|||+.++|+||||
T Consensus 194 ~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 194 YELCTLKHPFEGEN-LLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHcCCCCCCCCc-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999 554333 223333333333332222233455599999999999999999999999997
No 280
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.93 E-value=2.3e-26 Score=238.29 Aligned_cols=201 Identities=21% Similarity=0.264 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..+++.++|||++.+++ .+.. ...+++++++ .+++|.+++. .....+++..++.++.||+.||.|||++|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08228 51 KEIDLLKQLNHPNVIKYLD-SFIE---DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR 126 (267)
T ss_pred HHHHHHHhCCCcceeeeee-eEEE---CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4556788999999999888 4422 2355666666 6789998883 23345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||||+||+++.++.++++|||.+........
T Consensus 127 i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~--------------------------------------------- 161 (267)
T cd08228 127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--------------------------------------------- 161 (267)
T ss_pred eeCCCCCHHHEEEcCCCCEEECccccceeccchhH---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 162 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l 196 (267)
T cd08228 162 ---------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred ---------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred HHhhC---CCCCChh-hHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEE-KTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++ ||..... .......+.....++...... ....+++.+||..+|.+||++.++++
T Consensus 197 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 197 YEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 99998 5544322 223333344434444433333 44569999999999999999999987
No 281
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.93 E-value=3.7e-26 Score=239.93 Aligned_cols=208 Identities=13% Similarity=0.109 Sum_probs=152.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------CCCChhHHHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVYA 97 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------~~l~~~~~~~i~~qil~~l~~ 97 (712)
+..+++.++||||+++++ ++.. ....++++|+ .+++|.+++.+.. ..++...++.++.||+.||.|
T Consensus 59 e~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 134 (288)
T cd05061 59 EASVMKGFTCHHVVRLLG-VVSK---GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 134 (288)
T ss_pred HHHHHHhCCCCCeeeEEE-EEcC---CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 445788899999999887 4422 2356777776 6899999994321 224567889999999999999
Q ss_pred hhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 98 lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||++||+||||||+||+++.++.++++|||+++........
T Consensus 135 lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~--------------------------------------- 175 (288)
T cd05061 135 LNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--------------------------------------- 175 (288)
T ss_pred HHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccc---------------------------------------
Confidence 99999999999999999999999999999987532111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
.......++..|+|||.+.+..++.++||||
T Consensus 176 -------------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dvws 206 (288)
T cd05061 176 -------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWS 206 (288)
T ss_pred -------------------------------------------------cccCCCcccccccCHHHhccCCCChHhHHHH
Confidence 0000023467799999998888999999999
Q ss_pred HHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc------CcCCCC
Q 005147 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SEFLNE 327 (712)
Q Consensus 258 lGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~------hp~~~~ 327 (712)
|||++|||++ ||..... ......+.....+.......+...+++.+||+.+|.+|||+.++++ ||||.+
T Consensus 207 lG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 207 FGVVLWEITSLAEQPYQGLSN-EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred HHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 9999999987 5543322 2333333333333222223355669999999999999999999987 888876
Q ss_pred C
Q 005147 328 P 328 (712)
Q Consensus 328 ~ 328 (712)
.
T Consensus 286 ~ 286 (288)
T cd05061 286 V 286 (288)
T ss_pred C
Confidence 4
No 282
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.93 E-value=3.1e-26 Score=246.21 Aligned_cols=215 Identities=17% Similarity=0.184 Sum_probs=154.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.+ +||||+++++ ++.. .....+++++|+.+++|.+++... .+++..++.++.||+.||.|||+.||+|
T Consensus 55 ~E~~~l~~l~~h~ni~~~~~-~~~~-~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H 130 (337)
T cd07852 55 REIMFLQELGDHPNIVKLLN-VIKA-ENDKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIH 130 (337)
T ss_pred HHHHHHHHhcCCCCccceee-eecc-CCCceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 355677888 9999999888 4422 223457888899888999998554 5889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+.........
T Consensus 131 ~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~----------------------------------------------- 163 (337)
T cd07852 131 RDLKPSNILLNSDCRVKLADFGLARSLSELEEN----------------------------------------------- 163 (337)
T ss_pred CCCCHHHEEEcCCCcEEEeeccchhcccccccc-----------------------------------------------
Confidence 999999999999999999999988543111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
+ ..+ ......|+.+|+|||.+.+ ..++.++|||||||++|+
T Consensus 164 ~-------------------------------------~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~e 205 (337)
T cd07852 164 P-------------------------------------ENP-VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGE 205 (337)
T ss_pred c-------------------------------------cCc-chhcccccccccCceeeeccccccccchHHHHHHHHHH
Confidence 0 000 0011467999999998865 448899999999999999
Q ss_pred hhC---CCCCChhhHHHHHh--------------------------hcccCC--Cch-hhhcCchhHHHHHHcCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSS--------------------------LRHRVL--PPQ-LLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~--------------------------~~~~~~--~~~-~~~~~~~~~~li~~~L~~dP~~ 312 (712)
|++ ||............ +..... ... .........++|.+||+.+|.+
T Consensus 206 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~ 285 (337)
T cd07852 206 MLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNK 285 (337)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCccc
Confidence 999 45432211110000 000000 011 1112344559999999999999
Q ss_pred CCCHHHHhcCcCCCCCcC
Q 005147 313 RPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~~ 330 (712)
|||+.++++||||+....
T Consensus 286 Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 286 RLTAEEALEHPYVAQFHN 303 (337)
T ss_pred ccCHHHHhhChhhhhhcc
Confidence 999999999999987644
No 283
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.93 E-value=3.1e-26 Score=239.04 Aligned_cols=202 Identities=13% Similarity=0.144 Sum_probs=145.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC------CCCChhHHHHHHHHHHHHHHHhhh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~------~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+..+++.++|+||+++++..+ . ...+++++|+ .|++|.+++.... ..+++..++.++.||+.||.|||+
T Consensus 59 e~~~l~~l~~~~i~~~~~~~~-~---~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 134 (277)
T cd05036 59 EALIMSKFNHQNIVRLIGVSF-E---RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE 134 (277)
T ss_pred HHHHHHhCCCCCEeeEEEEEc-c---CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999888333 2 2345666666 6999999994332 248899999999999999999999
Q ss_pred cCceeccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 101 QGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
+|++||||||+||+++..+ .++++|||+++....... ++
T Consensus 135 ~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~---------------------------------~~----- 176 (277)
T cd05036 135 NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASY---------------------------------YR----- 176 (277)
T ss_pred CCEeecccchheEEEeccCCCcceEeccCccccccCCccc---------------------------------ee-----
Confidence 9999999999999998654 589999998854311100 00
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
.......+..|+|||++.+..++.++||||
T Consensus 177 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws 206 (277)
T cd05036 177 --------------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWS 206 (277)
T ss_pred --------------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHHH
Confidence 000012356799999998888999999999
Q ss_pred HHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 258 lGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|||++|||++ ||...... ..+..+.....+.......+...+++.+||..+|++|||+.++++|
T Consensus 207 lG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 207 FGVLLWEIFSLGYMPYPGRTNQ-EVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999986 56543322 2222222222222122223455599999999999999999999985
No 284
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93 E-value=4.3e-26 Score=238.53 Aligned_cols=206 Identities=19% Similarity=0.219 Sum_probs=152.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+..++..++|+|++.+++ ++... .....++++++.+++|.+++......+++.+++.++.||+.||+|||++|++|+|
T Consensus 48 e~~~l~~l~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~d 125 (287)
T cd07840 48 EIKLLQKLRHPNIVRLKE-IVTSK-GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRD 125 (287)
T ss_pred HHHHHHhccCCCeeehee-eEecC-CCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 445778889999999888 44322 1356788888877799999966545699999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||.+.........
T Consensus 126 l~p~nil~~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------- 156 (287)
T cd07840 126 IKGSNILINNDGVLKLADFGLARPYTKRNSA------------------------------------------------- 156 (287)
T ss_pred CcHHHeEEcCCCCEEEccccceeeccCCCcc-------------------------------------------------
Confidence 9999999999999999999987433211000
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHhh
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+. .++.++|||||||++|||+
T Consensus 157 ----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~ 196 (287)
T cd07840 157 ----------------------------------------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELF 196 (287)
T ss_pred ----------------------------------------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHH
Confidence 00013457889999987654 4789999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccC-------------------------CCc----hhhhc-CchhHHHHHHcCCCCCCCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRV-------------------------LPP----QLLLK-FPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~-------------------------~~~----~~~~~-~~~~~~li~~~L~~dP~~R 313 (712)
+ ||...... .....+.... .+. .+... .+...+++.+||..+|.+|
T Consensus 197 t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 275 (287)
T cd07840 197 LGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKR 275 (287)
T ss_pred hCCCCCCCCChH-HHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhC
Confidence 9 55443322 1111111100 000 01111 3445599999999999999
Q ss_pred CCHHHHhcCcCC
Q 005147 314 PKMGELLQSEFL 325 (712)
Q Consensus 314 pt~~eiL~hp~~ 325 (712)
|++.++++||||
T Consensus 276 p~~~~~l~~~~~ 287 (287)
T cd07840 276 ISADQALQHEYF 287 (287)
T ss_pred cCHHHHhhCcCC
Confidence 999999999997
No 285
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.93 E-value=3.8e-26 Score=238.43 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=149.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-------------CCCChhHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------RSVDVYECLHIFRQIVE 93 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-------------~~l~~~~~~~i~~qil~ 93 (712)
+..+|..++|+|++.+++ ++... ..+++++++ .|++|.++|...+ ..+++.++..++.||+.
T Consensus 58 e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 133 (280)
T cd05049 58 EAELLTNFQHENIVKFYG-VCTEG---DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIAS 133 (280)
T ss_pred HHHHHHhcCCCCchheee-EEecC---CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHH
Confidence 445788899999999888 44222 456777766 6999999994332 34788899999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||.|||++||+||||||+||+++.++.++++|||++....... .+.
T Consensus 134 ~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~~~- 179 (280)
T cd05049 134 GMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTD---------------------------------YYR- 179 (280)
T ss_pred HHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCc---------------------------------cee-
Confidence 9999999999999999999999999999999999874321110 000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
......++..|+|||.+.+..++.++
T Consensus 180 ------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 205 (280)
T cd05049 180 ------------------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTES 205 (280)
T ss_pred ------------------------------------------------------cCCCCcccceecChhhhccCCcchhh
Confidence 00002356789999999999999999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||||++|||++ ||..... ......+.....+...........+++.+||..+|.+|||+.|+++
T Consensus 206 Di~slG~il~e~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 206 DVWSFGVVLWEIFTYGKQPWYGLSN-EEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999996 5543332 2333333343333322233345569999999999999999999976
No 286
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93 E-value=3e-26 Score=238.91 Aligned_cols=206 Identities=17% Similarity=0.237 Sum_probs=152.6
Q ss_pred ccceeeccC---CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHG---DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~---~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+++.+ .|||++++++ .+. ....+++++++ .|++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 48 ~e~~~l~~l~~~~~~~vi~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~ 121 (277)
T cd06917 48 REVALLSQLRQSQPPNITKYYG-SYL---KGPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG 121 (277)
T ss_pred HHHHHHHHhccCCCCCeeeEee-eee---eCCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 344455555 4999999887 442 23456777776 689999998543 5899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||+|+||+++.++.++++|||.+........
T Consensus 122 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 156 (277)
T cd06917 122 VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--------------------------------------------- 156 (277)
T ss_pred cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc---------------------------------------------
Confidence 99999999999999999999999998743321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvl 261 (712)
......|+..|+|||.+.++ .++.++|+|||||+
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~ 191 (277)
T cd06917 157 ---------------------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGIT 191 (277)
T ss_pred ---------------------------------------------ccccccCCcceeCHHHhccCCccccchhHHHHHHH
Confidence 00013578899999998654 47899999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhh--cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|+|++ ||...... .....+... .++.+.. ..+...+++.+||..+|.+||++.+++.|+||+....
T Consensus 192 l~~ll~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~ 263 (277)
T cd06917 192 IYEMATGNPPYSDVDAF-RAMMLIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSK 263 (277)
T ss_pred HHHHHhCCCCCCCCChh-hhhhccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcccc
Confidence 999999 55433322 222222222 2222222 2345569999999999999999999999999977543
No 287
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.93 E-value=5.6e-26 Score=237.55 Aligned_cols=204 Identities=20% Similarity=0.263 Sum_probs=150.5
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++...+..+. |+|++.+++ ++.+ ....++++|+.+++|.+++.... ..+++.+++.++.||+.+|.|||++||+
T Consensus 46 ~e~~~l~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~ 121 (283)
T cd07830 46 REVKSLRKLNEHPNIVKLKE-VFRE---NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFF 121 (283)
T ss_pred HHHHHHHhccCCCCchhHHH-Hhhc---CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3445667777 999999888 4433 45778888888999999885443 4589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||+|+||+++.++.++++|||.+.......
T Consensus 122 H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~------------------------------------------------ 153 (283)
T cd07830 122 HRDLKPENLLVSGPEVVKIADFGLAREIRSRP------------------------------------------------ 153 (283)
T ss_pred cCCCChhhEEEcCCCCEEEeecccceeccCCC------------------------------------------------
Confidence 99999999999999999999999874321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
......++..|+|||++.+. .++.++|+||||+++|
T Consensus 154 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~ 190 (283)
T cd07830 154 -------------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMA 190 (283)
T ss_pred -------------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHH
Confidence 00013568899999988544 4899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhc--c------------------cCCC----ch----hhhcCchhHHHHHHcCCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLR--H------------------RVLP----PQ----LLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~--~------------------~~~~----~~----~~~~~~~~~~li~~~L~~dP~~ 312 (712)
+|++ ||.............. . ...+ .. .....+...+|+.+||+.+|.+
T Consensus 191 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 270 (283)
T cd07830 191 ELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKK 270 (283)
T ss_pred HHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCccc
Confidence 9999 4433322111111100 0 0000 00 1112345569999999999999
Q ss_pred CCCHHHHhcCcCC
Q 005147 313 RPKMGELLQSEFL 325 (712)
Q Consensus 313 Rpt~~eiL~hp~~ 325 (712)
|||+.|++.||||
T Consensus 271 Rpt~~ei~~~~~~ 283 (283)
T cd07830 271 RPTASQALQHPYF 283 (283)
T ss_pred CCCHHHHhhCCCC
Confidence 9999999999997
No 288
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=6e-26 Score=257.89 Aligned_cols=189 Identities=16% Similarity=0.216 Sum_probs=127.6
Q ss_pred ccCceEEEEee-CCccHHHhhcCCCCC-------------------CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCc
Q 005147 53 AIDPFVHAIEW-GDVSLRQWLDKPKRS-------------------VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (712)
Q Consensus 53 ~~~~~~l~~e~-~g~sL~~~l~~~~~~-------------------l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~N 112 (712)
....++++++| .+++|.+++...... .....+..|+.||+.||+|||++||+||||||+|
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 34467777777 588999988543211 1233467899999999999999999999999999
Q ss_pred eeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 113 FVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 113 Ill~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
||++. .+.+|++|||+++...... +.
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~---------------------------------~~-------------------- 312 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGI---------------------------------NY-------------------- 312 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccc---------------------------------cc--------------------
Confidence 99985 5789999999985421110 00
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----------------------C
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------V 249 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----------------------~ 249 (712)
......+++.|+|||.+.... +
T Consensus 313 ------------------------------------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 313 ------------------------------------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred ------------------------------------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 001146788999999663222 3
Q ss_pred CCccchHHHHHHHHHhhCCCCCChhh-HHHHHhhcccCC-------------Cchhhh-------cCchhHHHHHHcCCC
Q 005147 250 SCASDIYRLGVLLFELFCPFSTGEEK-TRTMSSLRHRVL-------------PPQLLL-------KFPKEASFCLWLLHP 308 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~pf~~~~~~-~~~~~~~~~~~~-------------~~~~~~-------~~~~~~~li~~~L~~ 308 (712)
+.++|||||||+||||++|....... ......+..... .+.... ......+||.+||+.
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 45679999999999999854433322 222222111111 000000 001122799999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcC
Q 005147 309 EPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++|||+.++|+||||+....
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCCc
Confidence 9999999999999999987644
No 289
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.93 E-value=4.4e-26 Score=235.02 Aligned_cols=200 Identities=18% Similarity=0.197 Sum_probs=147.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|+|++++++ ++. ...+++++++ .+++|.++|.+.. .+++..++.++.||+.||+|||.+||+|+
T Consensus 46 e~~~l~~l~h~~iv~~~~-~~~----~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~ 119 (257)
T cd05060 46 EASVMAQLDHPCIVRLIG-VCK----GEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHR 119 (257)
T ss_pred HHHHHHhcCCCCeeeEEE-EEc----CCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeecc
Confidence 445788899999999887 442 2345677766 6889999995544 58999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.++..+... .+ +
T Consensus 120 di~p~nili~~~~~~kl~df~~~~~~~~~~---------------------------------~~--------------~ 152 (257)
T cd05060 120 DLAARNVLLVNRHQAKISDFGMSRALGAGS---------------------------------DY--------------Y 152 (257)
T ss_pred CcccceEEEcCCCcEEeccccccceeecCC---------------------------------cc--------------c
Confidence 999999999999999999999885432110 00 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
. ......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 153 -------~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~ 192 (257)
T cd05060 153 -------R---------------------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAF 192 (257)
T ss_pred -------c---------------------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHH
Confidence 0 000012356799999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+......+......+...+++.+||..+|.+||++.++++
T Consensus 193 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 193 SYGAKPYGEMKG-AEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred cCCCCCcccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6 4433222 2333333333222222223345569999999999999999999876
No 290
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93 E-value=3.7e-26 Score=235.37 Aligned_cols=193 Identities=17% Similarity=0.197 Sum_probs=142.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|||++.+++ .+.. ...++++|+ .+++|.+++......++...++.+++||+.||+|||++||+|
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 124 (259)
T cd05037 50 ETASLMSQLSHKHLVKLYG-VCVR----DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVH 124 (259)
T ss_pred HHHHHHHcCCCcchhheee-EEec----CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 4445788999999999888 4422 234566666 689999999655446899999999999999999999999999
Q ss_pred ccCCCCceeecCCC-------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 106 HNVRPSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 106 rDLkP~NIll~~~~-------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|||||+||+++..+ .++++|||++......
T Consensus 125 ~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------------------------------- 161 (259)
T cd05037 125 GNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR------------------------------------------- 161 (259)
T ss_pred ccCccceEEEecCccccCCceeEEeCCCCcccccccc-------------------------------------------
Confidence 99999999999777 7999999887432110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIY 256 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIw 256 (712)
....++..|+|||.+.+. .++.++|||
T Consensus 162 ---------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~ 190 (259)
T cd05037 162 ---------------------------------------------------EERVERIPWIAPECIRNGQASLTIAADKW 190 (259)
T ss_pred ---------------------------------------------------cccccCCCccChhhhcCCCCCcchhhHHH
Confidence 002456679999999877 689999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|+|++ ||...... ............+ ........+++.+||..+|.+|||+.++++
T Consensus 191 slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 191 SFGTTLLEICSNGEEPLSTLSSS-EKERFYQDQHRLP--MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHHHHHHhCCCCCcccCCch-hHHHHHhcCCCCC--CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99999999987 33322211 1111111111111 111255669999999999999999999986
No 291
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.93 E-value=4.9e-26 Score=236.41 Aligned_cols=206 Identities=14% Similarity=0.117 Sum_probs=149.8
Q ss_pred cceeeccCCCCCccccccccccccc--ccCceEEEEee-CCccHHHhhcC-----CCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
+...++.++||||+++++..+.... .....++++++ .+++|.+++.. ....+++..++.++.||+.||+|||
T Consensus 51 e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH 130 (273)
T cd05035 51 EAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS 130 (273)
T ss_pred HHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4457888999999998873332221 11235566655 79999998822 2235899999999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
++||+||||||+||+++.++.+|++|||+++....... +
T Consensus 131 ~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------~-------- 169 (273)
T cd05035 131 NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY---------------------------------Y-------- 169 (273)
T ss_pred hCCeeccccchheEEECCCCeEEECCccceeecccccc---------------------------------c--------
Confidence 99999999999999999999999999998743311100 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
. ......++..|+|||.+.+..++.++||||||
T Consensus 170 ------------------------------------------~-----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG 202 (273)
T cd05035 170 ------------------------------------------R-----QGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 202 (273)
T ss_pred ------------------------------------------c-----ccccccCCccccCHhhcccCCCCcccchHHHH
Confidence 0 00001235679999999888899999999999
Q ss_pred HHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 260 vll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|++|||++ ||.... .......+.....+.......+...+++.+||..||.+|||+.+++++
T Consensus 203 ~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 203 VTMWEIATRGQTPYPGVE-NHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999986 443333 233444444443333333344566699999999999999999999863
No 292
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.93 E-value=2.6e-26 Score=240.67 Aligned_cols=207 Identities=17% Similarity=0.231 Sum_probs=155.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...+..++|+|++++++ .+... ...++++++ .|++|.+++......++..++..++.||+.||.|||+.||+|+
T Consensus 65 e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~ 140 (286)
T cd06614 65 EILIMKDCKHPNIVDYYD-SYLVG---DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHR 140 (286)
T ss_pred HHHHHHHCCCCCeeEEEE-EEEEC---CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 445688899999999887 33222 445666666 6799999996654469999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+........
T Consensus 141 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------- 171 (286)
T cd06614 141 DIKSDNILLSKDGSVKLADFGFAAQLTKEKS------------------------------------------------- 171 (286)
T ss_pred CCChhhEEEcCCCCEEECccchhhhhccchh-------------------------------------------------
Confidence 9999999999999999999997632211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|+|||||++|+|+
T Consensus 172 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~ 210 (286)
T cd06614 172 -----------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMA 210 (286)
T ss_pred -----------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHH
Confidence 000134688999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCch-hhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQ-LLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+ ||...... ..+..+.....+.. ... ......+++.+||+.+|.+|||+.++++|+||....
T Consensus 211 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 211 EGEPPYLREPPL-RALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred hCCCCCCCCCHH-HHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 8 55433332 22222222222221 111 233455999999999999999999999999999853
No 293
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.93 E-value=3.9e-26 Score=238.95 Aligned_cols=203 Identities=21% Similarity=0.214 Sum_probs=151.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC----------------CCCCChhHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------KRSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~----------------~~~l~~~~~~~i~~ 89 (712)
++..+++.+.|||++++++ ++. .....++++|+ .+++|.+++... ...+++.+++.++.
T Consensus 56 ~E~~~l~~l~h~niv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 131 (283)
T cd05090 56 QEASLMAELHHPNIVCLLG-VVT---QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131 (283)
T ss_pred HHHHHHhhCCCCCeeeEEE-EEe---cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHH
Confidence 3556889999999999887 332 23456777776 588999998321 12478889999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.++++|||+++........
T Consensus 132 ~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------- 180 (283)
T cd05090 132 QIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYY------------------------------- 180 (283)
T ss_pred HHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcce-------------------------------
Confidence 9999999999999999999999999999999999999988543211000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......++..|+|||.+.+..+
T Consensus 181 ---------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 203 (283)
T cd05090 181 ---------------------------------------------------------RVQPKSLLPIRWMPPEAIMYGKF 203 (283)
T ss_pred ---------------------------------------------------------ecccCCCccceecChHHhccCCC
Confidence 00000234677999999988889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|||++ ||..... ...+..+.....++......+...+++.+||..+|.+||++.+|+++
T Consensus 204 ~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 204 SSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 999999999999999997 5544332 33444444444333333334556699999999999999999999874
No 294
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.93 E-value=4e-26 Score=235.75 Aligned_cols=200 Identities=15% Similarity=0.140 Sum_probs=148.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|+|++++++ .+. .....++++++ .+++|.+++.. ....+++..++.++.||+.||+|||+.|++|
T Consensus 51 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H 126 (261)
T cd05072 51 EANLMKTLQHDKLVRLYA-VVT---KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 126 (261)
T ss_pred HHHHHHhCCCCCeeeEEE-EEc---CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 455788899999999887 332 22345667766 68999999943 3445889999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+.........
T Consensus 127 ~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 159 (261)
T cd05072 127 RDLRAANVLVSESLMCKIADFGLARVIEDNEYT----------------------------------------------- 159 (261)
T ss_pred cccchhhEEecCCCcEEECCCccceecCCCcee-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 197 (261)
T cd05072 160 ------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEI 197 (261)
T ss_pred ------------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHH
Confidence 00002346789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.... .......+......+..........+++.+||..+|++||+++++++
T Consensus 198 ~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 198 VTYGKIPYPGMS-NSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HccCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 97 454332 22333444433333333223345559999999999999999999865
No 295
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.93 E-value=6.1e-26 Score=239.66 Aligned_cols=208 Identities=19% Similarity=0.234 Sum_probs=151.4
Q ss_pred cceeeccCCCCCccccccccccccc-------ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEA-------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~-------~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+...+..++|||++.+++ ++.+.. ....+++++++.+++|...+......+++.+++.++.||+.||.|||+
T Consensus 56 e~~~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 134 (302)
T cd07864 56 EIKILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHK 134 (302)
T ss_pred HHHHHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 445678899999999887 443332 233788999998778988886555568999999999999999999999
Q ss_pred cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
.||+|+||||+||+++.++.+|++|||.+.........
T Consensus 135 ~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------ 172 (302)
T cd07864 135 KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR------------------------------------------ 172 (302)
T ss_pred CCeecCCCCHHHEEECCCCcEEeCcccccccccCCccc------------------------------------------
Confidence 99999999999999999999999999987432111000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (712)
+ .....++..|+|||.+.+. .++.++||||||
T Consensus 173 ---------------------------------------------~--~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG 205 (302)
T cd07864 173 ---------------------------------------------P--YTNKVITLWYRPPELLLGEERYGPAIDVWSCG 205 (302)
T ss_pred ---------------------------------------------c--cccceeccCccChHHhcCCCCCCchhHHHHHH
Confidence 0 0002347789999988654 478999999999
Q ss_pred HHHHHhhC---CCCCChhhHHH--HHhhcccCCCc--------------------------hhhhcCchhHHHHHHcCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRT--MSSLRHRVLPP--------------------------QLLLKFPKEASFCLWLLHP 308 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~--~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~L~~ 308 (712)
|++|+|++ ||...+..... +........+. ......+...+++.+||..
T Consensus 206 ~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 285 (302)
T cd07864 206 CILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTL 285 (302)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccC
Confidence 99999998 44433222111 11111111000 0111224455999999999
Q ss_pred CCCCCCCHHHHhcCcCC
Q 005147 309 EPSGRPKMGELLQSEFL 325 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~ 325 (712)
+|.+|||+.+++.||||
T Consensus 286 ~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 286 DPSKRCTAEEALNSPWL 302 (302)
T ss_pred ChhhCCCHHHHhcCCCC
Confidence 99999999999999997
No 296
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.93 E-value=5.5e-26 Score=237.24 Aligned_cols=204 Identities=20% Similarity=0.259 Sum_probs=151.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+..++..++|+|++++++ ++.+ ...+++++++.+++|.+++.+....+++.+++.++.||+.||.|||++||+|+|
T Consensus 48 e~~~l~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~ 123 (282)
T cd07829 48 EISLLKELKHPNIVKLLD-VIHT---ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRD 123 (282)
T ss_pred HHHHHHhcCCCCHHHHHh-hhhc---CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 445778889999999888 4432 256788888877899999966544599999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||.+........ .
T Consensus 124 l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--------------------------------~----------------- 154 (282)
T cd07829 124 LKPQNILINRDGVLKLADFGLARAFGIPLR--------------------------------T----------------- 154 (282)
T ss_pred CChheEEEcCCCCEEEecCCcccccCCCcc--------------------------------c-----------------
Confidence 999999999999999999998743321100 0
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHhh
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eLl 266 (712)
.....++.+|+|||.+.+. .++.++|||||||++|||+
T Consensus 155 -----------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~ 193 (282)
T cd07829 155 -----------------------------------------YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMI 193 (282)
T ss_pred -----------------------------------------cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHH
Confidence 0002357789999998776 6899999999999999999
Q ss_pred C---CCCCChhhHHHHHhhc-------------------ccCCCc--------hhhhcCchhHHHHHHcCCCCCCCCCCH
Q 005147 267 C---PFSTGEEKTRTMSSLR-------------------HRVLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~-------------------~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (712)
+ ||.............. ...++. .+........+++.+||..+|.+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~ 273 (282)
T cd07829 194 TGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISA 273 (282)
T ss_pred hCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCH
Confidence 9 4433322111111000 000110 011123345699999999999999999
Q ss_pred HHHhcCcCC
Q 005147 317 GELLQSEFL 325 (712)
Q Consensus 317 ~eiL~hp~~ 325 (712)
.+++.||||
T Consensus 274 ~~~l~~p~~ 282 (282)
T cd07829 274 KEALKHPYF 282 (282)
T ss_pred HHHhhCcCC
Confidence 999999997
No 297
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.93 E-value=5.7e-26 Score=235.40 Aligned_cols=202 Identities=13% Similarity=0.141 Sum_probs=151.4
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++||||+++++ .+. ....+++++|+ .+++|.+++......+++.+++.++.|++.||.|||++||+|+
T Consensus 55 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~ 130 (266)
T cd05033 55 EASIMGQFDHPNIIRLEG-VVT---KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHR 130 (266)
T ss_pred HHHHHHhCCCCCcceEeE-EEe---cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 455788899999999888 442 23456777776 5889999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++.......- .+
T Consensus 131 di~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------~~--------------- 163 (266)
T cd05033 131 DLAARNILVNSNLVCKVSDFGLSRRLEDSEA--------------------------------TY--------------- 163 (266)
T ss_pred CCCcceEEEcCCCCEEECccchhhccccccc--------------------------------ce---------------
Confidence 9999999999999999999998854321100 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 164 -----------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~ 202 (266)
T cd05033 164 -----------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVM 202 (266)
T ss_pred -----------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHH
Confidence 000022467899999998888999999999999999998
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||..... ......+.....++..........+++.+||+.+|++||++.+++++
T Consensus 203 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 203 SYGERPYWDMSN-QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ccCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 6 5543332 23333333332222223334455699999999999999999999873
No 298
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.93 E-value=3.1e-26 Score=239.81 Aligned_cols=203 Identities=19% Similarity=0.264 Sum_probs=146.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++||||+++++ ++. ....+++++|+ .+++|.+++.... .+++.+++.++.||+.||+|||++||+|
T Consensus 49 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~h 123 (286)
T cd07846 49 REIRMLKQLRHENLVNLIE-VFR---RKKRLYLVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHSHNIIH 123 (286)
T ss_pred HHHHHHHhcCCcchhhHHH-hcc---cCCeEEEEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3455788899999999888 442 23456777776 5777777664433 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++........
T Consensus 124 ~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 155 (286)
T cd07846 124 RDIKPENILVSQSGVVKLCDFGFARTLAAPGE------------------------------------------------ 155 (286)
T ss_pred cCCCHHHEEECCCCcEEEEeeeeeeeccCCcc------------------------------------------------
Confidence 99999999999999999999998743211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
......++.+|+|||.+.+.. ++.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e 193 (286)
T cd07846 156 ------------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTE 193 (286)
T ss_pred ------------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHH
Confidence 000135688999999987644 7889999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcc---c------------------CCCc---------hhhhcCchhHHHHHHcCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRH---R------------------VLPP---------QLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~---~------------------~~~~---------~~~~~~~~~~~li~~~L~~dP~ 311 (712)
|++ ||...... .....+.. . ..+. ..........+|+.+||..+|.
T Consensus 194 l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 272 (286)
T cd07846 194 MLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPD 272 (286)
T ss_pred HHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcc
Confidence 999 44332221 11111100 0 0000 0111223455999999999999
Q ss_pred CCCCHHHHhcCcCC
Q 005147 312 GRPKMGELLQSEFL 325 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~ 325 (712)
+||++.++++||||
T Consensus 273 ~Rp~~~~il~~~~~ 286 (286)
T cd07846 273 DRPSSSQLLHHEFF 286 (286)
T ss_pred cchhHHHHhcCCCC
Confidence 99999999999998
No 299
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.93 E-value=5.1e-26 Score=240.02 Aligned_cols=198 Identities=14% Similarity=0.117 Sum_probs=144.4
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+..++..+ +|||++++++ .+.. ...+++++++ .+++|.+++.+.. ..+++..++.|+.|
T Consensus 52 E~~~l~~l~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 127 (297)
T cd05089 52 ELEVLCKLGHHPNIINLLG-ACEN---RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASD 127 (297)
T ss_pred HHHHHHhhcCCCchhheEE-EEcc---CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHH
Confidence 44456666 7999999887 4422 2345666666 6899999994321 24788999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++||+||||||+||+++.++.+|++|||++......
T Consensus 128 i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------------------------- 172 (297)
T cd05089 128 VATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY----------------------------------- 172 (297)
T ss_pred HHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce-----------------------------------
Confidence 999999999999999999999999999999999999987321000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
+ .......+..|+|||.+.+..++
T Consensus 173 ~--------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 196 (297)
T cd05089 173 V--------------------------------------------------------KKTMGRLPVRWMAIESLNYSVYT 196 (297)
T ss_pred e--------------------------------------------------------ccCCCCcCccccCchhhccCCCC
Confidence 0 00001124569999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||...... .....+.....+.......+...+|+.+||..+|.+|||+.++++
T Consensus 197 ~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 197 TKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999999986 55443332 233333333322222223345569999999999999999999976
No 300
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.93 E-value=6.1e-26 Score=234.51 Aligned_cols=200 Identities=15% Similarity=0.127 Sum_probs=149.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|||++++++ ++. ....+++++|+. |++|.+++... +..+++.++..++.||+.||.|||+.||+|
T Consensus 51 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 126 (261)
T cd05068 51 EAQIMKKLRHPKLIQLYA-VCT---LEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIH 126 (261)
T ss_pred HHHHHHHCCCCCccceeE-EEe---cCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 445788899999999887 442 234567788775 99999999543 356899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++...+.....
T Consensus 127 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 159 (261)
T cd05068 127 RDLAARNVLVGENNICKVADFGLARVIKEDIYE----------------------------------------------- 159 (261)
T ss_pred ccCCcceEEEcCCCCEEECCcceEEEccCCccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+..|+|||.+.+..++.++|||||||++|||
T Consensus 160 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 197 (261)
T cd05068 160 ------------------------------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEI 197 (261)
T ss_pred ------------------------------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHH
Confidence 00001124579999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+......+..........+++.+||+.+|.+||++.++++
T Consensus 198 ~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 198 VTYGRMPYPGMTNA-EVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 97 55443322 333333333222222233455669999999999999999999875
No 301
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.93 E-value=5.1e-26 Score=240.71 Aligned_cols=202 Identities=15% Similarity=0.169 Sum_probs=148.3
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+..+++.+ +|+||+++++ .+.. ....++++|+ .+++|.+++.. ....+++.+++.++.||+.||.|||++||+
T Consensus 88 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~iv 163 (302)
T cd05055 88 ELKIMSHLGNHENIVNLLG-ACTI---GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCI 163 (302)
T ss_pred HHHHHHhccCCCCcceEEE-EEec---CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 44567777 8999999887 4422 2356777776 68999999954 233489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||+++...... .+
T Consensus 164 H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~------------- 197 (302)
T cd05055 164 HRDLAARNVLLTHGKIVKICDFGLARDIMNDS---------------------------------NY------------- 197 (302)
T ss_pred hhhhccceEEEcCCCeEEECCCcccccccCCC---------------------------------ce-------------
Confidence 99999999999999999999999885432110 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
. ......++..|+|||.+.+..++.++|||||||++||
T Consensus 198 -~-----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~e 235 (302)
T cd05055 198 -V-----------------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWE 235 (302)
T ss_pred -e-----------------------------------------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHH
Confidence 0 0000235778999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||............+.....+.......+...+|+.+||..+|++|||+.++++
T Consensus 236 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 236 IFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 986 554333322222333222222222223345569999999999999999999986
No 302
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93 E-value=5.2e-26 Score=234.91 Aligned_cols=200 Identities=13% Similarity=0.126 Sum_probs=147.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..++|+|++.+++ ++.. ...++++++ .+++|.+++.. ....+++..++.++.||+.||.|||+.||+
T Consensus 50 ~E~~~l~~l~~~~i~~~~~-~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 124 (260)
T cd05070 50 EEAQIMKKLRHDKLVQLYA-VVSE----EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 124 (260)
T ss_pred HHHHHHHhcCCCceEEEEe-EECC----CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3445788899999999887 3321 234566666 68999999854 344589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||.+.........
T Consensus 125 H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------- 158 (260)
T cd05070 125 HRDLRSANILVGDGLVCKIADFGLARLIEDNEYT---------------------------------------------- 158 (260)
T ss_pred cCCCccceEEEeCCceEEeCCceeeeeccCcccc----------------------------------------------
Confidence 9999999999999999999999988432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05070 159 -------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (260)
T ss_pred -------------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHH
Confidence 0000234567999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||.... .......+.....++..........+|+.+||..+|.+|||+.+++.
T Consensus 196 l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 196 LVTKGRVPYPGMN-NREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 997 444322 22333334333222222233345569999999999999999998864
No 303
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.93 E-value=6.9e-26 Score=232.35 Aligned_cols=200 Identities=16% Similarity=0.162 Sum_probs=149.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++++++ ++.. ...+++++|+ .+++|.+++......+++..++.++.||+.+|.|+|++|++|+
T Consensus 42 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~ 117 (250)
T cd05085 42 EARILKQYDHPNIVKLIG-VCTQ---RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHR 117 (250)
T ss_pred HHHHHHhCCCCCcCeEEE-EEec---CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 445788899999999888 4532 2356677776 6999999996555558999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++.........
T Consensus 118 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------ 149 (250)
T cd05085 118 DLAARNCLVGENNVLKISDFGMSRQEDDGIYS------------------------------------------------ 149 (250)
T ss_pred ccChheEEEcCCCeEEECCCccceeccccccc------------------------------------------------
Confidence 99999999999999999999987321100000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 150 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~ 188 (250)
T cd05085 150 -----------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188 (250)
T ss_pred -----------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHh
Confidence 000012356799999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+.............+...+++.+||..+|++||++.++++
T Consensus 189 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 189 SLGVCPYPGMTN-QQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred cCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7 5644332 2333333333222222233455669999999999999999999976
No 304
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.93 E-value=7.7e-26 Score=234.10 Aligned_cols=199 Identities=14% Similarity=0.112 Sum_probs=147.4
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|+|++++++ .+. ...+++++++ .+++|.+++.+ .+..+++..++.++.||+.||+|||+.||+|
T Consensus 51 E~~~l~~l~~~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H 125 (262)
T cd05071 51 EAQVMKKLRHEKLVQLYA-VVS----EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 125 (262)
T ss_pred HHHHHHhCCCCCcceEEE-EEC----CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 445788899999999877 332 2335677776 68899999954 3345789999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+....... +.
T Consensus 126 ~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~----------------------------------~~------------- 158 (262)
T cd05071 126 RDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------YT------------- 158 (262)
T ss_pred cccCcccEEEcCCCcEEeccCCceeeccccc----------------------------------cc-------------
Confidence 9999999999999999999999874332110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 159 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~el 196 (262)
T cd05071 159 ------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 196 (262)
T ss_pred ------------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHH
Confidence 00002356789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+......+..........+++.+||+.+|.+||++.++++
T Consensus 197 lt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 197 TTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HcCCCCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 97 55443322 223333222222222223344569999999999999999999876
No 305
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.93 E-value=5.7e-26 Score=236.68 Aligned_cols=202 Identities=13% Similarity=0.098 Sum_probs=149.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------CCCCChhHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------~~~l~~~~~~~i~~qil~~l~ 96 (712)
++..+|+.++|||++++++ ++.. ...+++++|+ .+++|.+++... ...+++..++.++.||+.||.
T Consensus 58 ~e~~~l~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 133 (277)
T cd05032 58 NEASVMKEFNCHHVVRLLG-VVST---GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133 (277)
T ss_pred HHHHHHHhCCCCceeEEEE-EEcC---CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 3445688899999999888 4432 2456777777 589999999432 123678899999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||+.||+||||||+||+++.++.++++|||+++........
T Consensus 134 ~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------- 175 (277)
T cd05032 134 YLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY-------------------------------------- 175 (277)
T ss_pred HHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccc--------------------------------------
Confidence 999999999999999999999999999999987432211000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
. ......++..|+|||.+.+..++.++|||
T Consensus 176 ---------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05032 176 ---------------------------------------------R-----KGGKGLLPVRWMAPESLKDGVFTTKSDVW 205 (277)
T ss_pred ---------------------------------------------c-----cCCCCCccccccCHHHHhcCCCCcccchH
Confidence 0 00002457789999999888899999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ||.... .......+.....+.......+...+++.+||..+|++|||+.++++
T Consensus 206 slG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 206 SFGVVLWEMATLAEQPYQGLS-NEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHHHhhccCCCCCccCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999997 554332 23334444433333222223445569999999999999999999986
No 306
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.93 E-value=5.7e-26 Score=243.21 Aligned_cols=211 Identities=17% Similarity=0.198 Sum_probs=155.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..++..++|||++++++ ++.. ....+++++++.+++|.+++... .+++..+..++.||+.||.|||++||+||
T Consensus 58 ~E~~~l~~l~hpniv~~~~-~~~~--~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~ 132 (328)
T cd07856 58 RELKLLKHLRHENIISLSD-IFIS--PLEDIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHR 132 (328)
T ss_pred HHHHHHHhcCCCCeeeEee-eEec--CCCcEEEEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 3455788899999999887 4422 23357888999889999988543 37888999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+......
T Consensus 133 dl~p~Nili~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 161 (328)
T cd07856 133 DLKPSNILINENCDLKICDFGLARIQDPQ--------------------------------------------------- 161 (328)
T ss_pred CCCHHHEeECCCCCEEeCccccccccCCC---------------------------------------------------
Confidence 99999999999999999999987321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eL 265 (712)
.....++..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 162 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el 199 (328)
T cd07856 162 ------------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM 199 (328)
T ss_pred ------------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHH
Confidence 000346788999998866 4589999999999999999
Q ss_pred hC---CCCCChhhHHH--HHh------------------------hccc-CCCc-hh-hhcCchhHHHHHHcCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRT--MSS------------------------LRHR-VLPP-QL-LLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 266 l~---pf~~~~~~~~~--~~~------------------------~~~~-~~~~-~~-~~~~~~~~~li~~~L~~dP~~R 313 (712)
++ ||......... ... +... ..|. .. ....+...++|.+||+.+|++|
T Consensus 200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 279 (328)
T cd07856 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279 (328)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence 99 45433211100 000 0000 0010 01 1122345599999999999999
Q ss_pred CCHHHHhcCcCCCCCcCchHHH
Q 005147 314 PKMGELLQSEFLNEPRDSMEER 335 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~~~~e~ 335 (712)
||+.+++.||||.....+..+.
T Consensus 280 ~t~~ell~~~~~~~~~~~~~~~ 301 (328)
T cd07856 280 ISAAEALAHPYLAPYHDPTDEP 301 (328)
T ss_pred CCHHHHhcCCccccccCCcccc
Confidence 9999999999998877765543
No 307
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.93 E-value=7.3e-28 Score=232.65 Aligned_cols=231 Identities=16% Similarity=0.171 Sum_probs=175.7
Q ss_pred ccccccccccccCCCCCcceeeeccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc----CCCCCC
Q 005147 4 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSV 79 (712)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~----~~~~~l 79 (712)
++++=+|+-...+...+..|+.+-+ ++.+.-+-||||++|+..| .+..-++.||+.+.||..+.+ .....+
T Consensus 90 ~~mAVKrIr~~n~~keq~rll~e~d-~~mks~~cp~IVkfyGa~F----~EGdcWiCMELMd~SlDklYk~vy~vq~~~i 164 (361)
T KOG1006|consen 90 KLMAVKRIRSNNIEKEQKRLLMEHD-TVMKSSNCPNIVKFYGALF----SEGDCWICMELMDISLDKLYKRVYSVQKSRI 164 (361)
T ss_pred cEEEEEEeeeccchHHHHHHHHHHH-HHHhhcCCcHHHHHhhhhh----cCCceeeeHHHHhhhHHHHHHHHHHHHhccC
Confidence 3445555555555445555665555 4677788999999888555 334567899999999987652 233458
Q ss_pred ChhHHHHHHHHHHHHHHHhhh-cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 80 DVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 80 ~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
++...-+|..-.++||+||-. ..|||||+||+|||++..|.||+||||+|......
T Consensus 165 pE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------------- 221 (361)
T KOG1006|consen 165 PENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------------- 221 (361)
T ss_pred cHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH-----------------------
Confidence 999999999999999999997 59999999999999999999999999998332100
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
+ ..+.-.|...|
T Consensus 222 ------------i--------------------------------------------------------AkT~daGCrpY 233 (361)
T KOG1006|consen 222 ------------I--------------------------------------------------------AKTVDAGCRPY 233 (361)
T ss_pred ------------H--------------------------------------------------------HhhhccCCccc
Confidence 0 01124678999
Q ss_pred cCcccccC--CCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhh-----cCchhHHHHHHcCCC
Q 005147 239 ASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-----KFPKEASFCLWLLHP 308 (712)
Q Consensus 239 ~aPE~~~~--~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~~L~~ 308 (712)
||||.+.. ..|+.+||+||||++|||+.| ||..+.........+..+.+|..... .......||..||.+
T Consensus 234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K 313 (361)
T KOG1006|consen 234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK 313 (361)
T ss_pred cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence 99999943 349999999999999999999 77777776666666666665543322 234556899999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcC
Q 005147 309 EPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|-..||+..+++.+||+.....
T Consensus 314 d~~~Rpky~~Lk~~~fyr~y~~ 335 (361)
T KOG1006|consen 314 DRSDRPKYDDLKKFPFYRMYAV 335 (361)
T ss_pred ccccCcchhhhhcCchhhhhhh
Confidence 9999999999999999987643
No 308
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=6e-26 Score=240.29 Aligned_cols=202 Identities=16% Similarity=0.169 Sum_probs=148.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~ 89 (712)
++..++..+ +||||+.+++ ++.. ...+++++|+ .+++|.++|.+. ...++..+++.++.
T Consensus 69 ~E~~~l~~l~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (304)
T cd05101 69 SEMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTY 144 (304)
T ss_pred HHHHHHHhhccCCCchheeE-EEec---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHH
Confidence 444567777 8999999888 4432 2456667776 688999999442 12477888999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.++++|||+++........
T Consensus 145 qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~------------------------------- 193 (304)
T cd05101 145 QVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYY------------------------------- 193 (304)
T ss_pred HHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceeccccccc-------------------------------
Confidence 9999999999999999999999999999999999999988543211000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
. ......++..|+|||++.+..+
T Consensus 194 --~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 216 (304)
T cd05101 194 --K-------------------------------------------------------KTTNGRLPVKWMAPEALFDRVY 216 (304)
T ss_pred --c-------------------------------------------------------cccCCCCCceeeCchhhccCCC
Confidence 0 0000234678999999988889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+.++|||||||++|+|++ ||.. .........+.....+...........+|+.+||..+|.+|||+.++++
T Consensus 217 ~~~~Di~slG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 217 THQSDVWSFGVLMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred CchhhHHHHHHHHHHHHcCCCCCccc-CCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 999999999999999987 3432 2233333334333322222223345569999999999999999999988
No 309
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.93 E-value=4.3e-26 Score=249.87 Aligned_cols=156 Identities=15% Similarity=0.163 Sum_probs=116.4
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCc
Q 005147 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (712)
Q Consensus 78 ~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (712)
.+++.++..++.||+.||+|||+.||+||||||+||+++.++.+|++|||+++........
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~------------------- 293 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY------------------- 293 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-------------------
Confidence 3677888999999999999999999999999999999999999999999988533111000
Q ss_pred hhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCcc
Q 005147 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (712)
Q Consensus 158 ~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (712)
.......++..
T Consensus 294 ---------------------------------------------------------------------~~~~~~~~~~~ 304 (400)
T cd05105 294 ---------------------------------------------------------------------VSKGSTFLPVK 304 (400)
T ss_pred ---------------------------------------------------------------------cccCCcCCCcc
Confidence 00001345778
Q ss_pred ccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCC
Q 005147 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
|+|||.+.+..++.++|||||||++|||++ ||............+.....++......+...+++.+||..+|++|
T Consensus 305 y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 384 (400)
T cd05105 305 WMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKR 384 (400)
T ss_pred eEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHC
Confidence 999999988889999999999999999985 5544333333333333333332222233455699999999999999
Q ss_pred CCHHHHhc
Q 005147 314 PKMGELLQ 321 (712)
Q Consensus 314 pt~~eiL~ 321 (712)
||+.++.+
T Consensus 385 Pt~~~l~~ 392 (400)
T cd05105 385 PSFLHLSD 392 (400)
T ss_pred cCHHHHHH
Confidence 99998876
No 310
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.9e-26 Score=256.15 Aligned_cols=201 Identities=20% Similarity=0.234 Sum_probs=161.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------CCC----CChhHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRS----VDVYECLHIFRQIV 92 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------~~~----l~~~~~~~i~~qil 92 (712)
||..+|+.++|||||++|| +| ...+++|+++|| .-|+|.+||+.. +.. |+..+.++|+.||+
T Consensus 538 REaeLla~l~H~nIVrLlG-VC---~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIA 613 (774)
T KOG1026|consen 538 REAELLAELQHPNIVRLLG-VC---REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIA 613 (774)
T ss_pred HHHHHHHhccCCCeEEEEE-EE---ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHH
Confidence 4455899999999999999 66 345678888888 589999999432 122 78889999999999
Q ss_pred HHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccc
Q 005147 93 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (712)
Q Consensus 93 ~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg 172 (712)
.|++||-++.+|||||-..|+||..+-.|||.|||++++.=+. |+
T Consensus 614 aGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYss----------------------------------DY- 658 (774)
T KOG1026|consen 614 AGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSS----------------------------------DY- 658 (774)
T ss_pred HHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhh----------------------------------hh-
Confidence 9999999999999999999999999999999999999764222 11
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCc
Q 005147 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252 (712)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 252 (712)
.|... ...-...|||||.+..++++++
T Consensus 659 ---------------------------------Yk~~~--------------------~t~lPIRWMppEsIly~kFTte 685 (774)
T KOG1026|consen 659 ---------------------------------YKVRG--------------------NTLLPIRWMPPESILYGKFTTE 685 (774)
T ss_pred ---------------------------------hcccC--------------------CceeeeecCCHHHhhcCcccch
Confidence 00000 0112457999999999999999
Q ss_pred cchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 253 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 253 sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
|||||+||+|||+++ ||....+. +++..++.+..-+......+...+|+..||+.+|++||++.||-
T Consensus 686 SDVWs~GVvLWEIFsyG~QPy~glSn~-EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 686 SDVWSFGVVLWEIFSYGKQPYYGLSNQ-EVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred hhhhhhhhhhhhhhccccCcccccchH-HHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 999999999999999 88765544 66777777766555555666677999999999999999999973
No 311
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93 E-value=7.6e-26 Score=232.52 Aligned_cols=202 Identities=20% Similarity=0.255 Sum_probs=156.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..+++.++|+||+.+++.++ . ...+++++++ .+++|.+++.+ ....+++..+..++.||+.||.|||+.|
T Consensus 48 ~e~~~l~~l~~~~i~~~~~~~~-~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~ 123 (256)
T cd08530 48 NEIRILASVNHPNIISYKEAFL-D---GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK 123 (256)
T ss_pred HHHHHHHhCCCCCchhhhhhhc-c---CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4556788899999999887333 2 2556777776 69999999843 2345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
++|+||+|+||+++.++.++++|||.+...... +
T Consensus 124 i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------------------------~----------- 157 (256)
T cd08530 124 ILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------------------------M----------- 157 (256)
T ss_pred cccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------------------------C-----------
Confidence 999999999999999999999999987432111 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....++..|+|||.+.+..++.++|+||||+++
T Consensus 158 ----------------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~ 191 (256)
T cd08530 158 ----------------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLL 191 (256)
T ss_pred ----------------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHHHHH
Confidence 0003467889999999888899999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||...... ...........++.......+..+++.+||..+|.+|||+.++++||++
T Consensus 192 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 192 YEMATFAPPFEARSMQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 99998 55444332 2333333444444333344556699999999999999999999999975
No 312
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.93 E-value=3.4e-26 Score=251.56 Aligned_cols=213 Identities=15% Similarity=0.188 Sum_probs=157.0
Q ss_pred ccceeecc-CCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCC---ChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV---DVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l---~~~~~~~i~~qil~~l~~lHs~g 102 (712)
+|.-.|.. =+|||||+.|| .+...+..||..|.|..+|.+++......+ .....+.++.|++.||++||+.+
T Consensus 551 rEi~lL~eSD~H~NviRyyc----~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~ 626 (903)
T KOG1027|consen 551 REIQLLQESDEHPNVIRYYC----SEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK 626 (903)
T ss_pred HHHHHHHhccCCCceEEEEe----eccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence 44334444 58999999666 456677899999999999999996632111 22556889999999999999999
Q ss_pred ceeccCCCCceeecC---C--CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 103 IVVHNVRPSCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 103 IvHrDLkP~NIll~~---~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||||||||.||||+. . ..++|.|||+|+..+... ..|.
T Consensus 627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~--------------------------------sS~~----- 669 (903)
T KOG1027|consen 627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK--------------------------------SSFS----- 669 (903)
T ss_pred cccccCCCceEEEEccCCCcceeEEecccccccccCCCc--------------------------------chhh-----
Confidence 999999999999985 2 357999999997653321 0010
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
+.....||.+|+|||++....-+.++||||
T Consensus 670 --------------------------------------------------r~s~~sGt~GW~APE~L~~~~~~~avDiFs 699 (903)
T KOG1027|consen 670 --------------------------------------------------RLSGGSGTSGWQAPEQLREDRKTQAVDIFS 699 (903)
T ss_pred --------------------------------------------------cccCCCCcccccCHHHHhccccCcccchhh
Confidence 001146899999999999998888999999
Q ss_pred HHHHHHHhhC-CCCCChhhHHHHHhhcccCCCchhhhcCc--hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 258 LGVLLFELFC-PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 258 lGvll~eLl~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++|+.++ +-.++........++..+.+........+ .+.+||.+||+++|..||+|.++|.||||.....
T Consensus 700 lGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ek 775 (903)
T KOG1027|consen 700 LGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEK 775 (903)
T ss_pred cCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHH
Confidence 9999999998 23333233333334444443333233333 5569999999999999999999999999987644
No 313
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.93 E-value=4.8e-26 Score=237.41 Aligned_cols=192 Identities=18% Similarity=0.215 Sum_probs=138.6
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..+++.+.||||+++++ ++.. ....++++|| .+++|..++.+....+++..++.++.||+.||+|||++||+|||
T Consensus 67 ~~~~~~l~h~niv~~~~-~~~~---~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d 142 (274)
T cd05076 67 ASLMSQVSHIHLAFVHG-VCVR---GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGN 142 (274)
T ss_pred HHHHhcCCCCCeeeEEE-EEEe---CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 34678899999999888 5432 2344566665 68999999966555689999999999999999999999999999
Q ss_pred CCCCceeecCCC-------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 108 VRPSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 108 LkP~NIll~~~~-------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
|||+||+++..+ .++++|||.+......
T Consensus 143 lkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~--------------------------------------------- 177 (274)
T cd05076 143 VCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR--------------------------------------------- 177 (274)
T ss_pred CCcccEEEeccCcccCccceeeecCCccccccccc---------------------------------------------
Confidence 999999997543 3677777655211000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlG 259 (712)
....++..|+|||.+.+ ..++.++||||||
T Consensus 178 -------------------------------------------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG 208 (274)
T cd05076 178 -------------------------------------------------EERVERIPWIAPECVPGGNSLSTAADKWSFG 208 (274)
T ss_pred -------------------------------------------------cccccCCcccCchhhcCCCCCCcHHHHHHHH
Confidence 00245777999998876 4589999999999
Q ss_pred HHHHHhhC----CCCCChhhHHHHHhhccc-CCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 260 VLLFELFC----PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 260 vll~eLl~----pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|++|||++ ||....... ........ ..|. ...+...+++.+||..+|.+|||+.++|++
T Consensus 209 ~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 209 TTLLEICFDGEVPLKERTPSE-KERFYEKKHRLPE---PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHHHhCCCCCccccChHH-HHHHHHhccCCCC---CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 99999963 554332211 11111111 1111 123456799999999999999999999874
No 314
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93 E-value=7.4e-26 Score=233.82 Aligned_cols=199 Identities=13% Similarity=0.122 Sum_probs=147.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|+|++.+++ ++. ....++++++ .+++|.+++.. ....+++..++.++.||+.||.|||+.||+|
T Consensus 51 E~~~l~~l~h~~i~~~~~-~~~----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H 125 (260)
T cd05069 51 EAQIMKKLRHDKLVPLYA-VVS----EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIH 125 (260)
T ss_pred HHHHHHhCCCCCeeeEEE-EEc----CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 455788999999999876 442 2335666666 67899999954 3344789999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+.........
T Consensus 126 ~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 158 (260)
T cd05069 126 RDLRAANILVGDNLVCKIADFGLARLIEDNEYT----------------------------------------------- 158 (260)
T ss_pred cccCcceEEEcCCCeEEECCCccceEccCCccc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 159 ------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el 196 (260)
T cd05069 159 ------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 196 (260)
T ss_pred ------------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHH
Confidence 00002346679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++..........+++.+||..+|.+||+++++++
T Consensus 197 ~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 197 VTKGRVPYPGMVN-REVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HhCCCCCCCCCCH-HHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 97 5543322 2333333333222222223344559999999999999999999876
No 315
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-27 Score=232.09 Aligned_cols=208 Identities=12% Similarity=0.148 Sum_probs=158.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++.+-+-|.||+.|+.+|. ...+++||||| .|++.+.++.+...|++.++..|++..+.||+|||...-|||
T Consensus 78 EISIMQQC~S~yVVKYYGSYFK----~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHR 153 (502)
T KOG0574|consen 78 EISIMQQCKSKYVVKYYGSYFK----HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHR 153 (502)
T ss_pred HHHHHHHcCCchhhhhhhhhcc----CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 4445777889999998885542 23456666665 699999998888889999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||..|||++.+|..|++|||.+...-.. |
T Consensus 154 DIKAGNILLNT~G~AKLADFGVAGQLTDT-----------------------M--------------------------- 183 (502)
T KOG0574|consen 154 DIKAGNILLNTDGIAKLADFGVAGQLTDT-----------------------M--------------------------- 183 (502)
T ss_pred hcccccEEEcccchhhhhhccccchhhhh-----------------------H---------------------------
Confidence 99999999999999999999988322000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.+....+|||.|||||++..-.|++.+||||||++..||.
T Consensus 184 ----------------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMA 223 (502)
T KOG0574|consen 184 ----------------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMA 223 (502)
T ss_pred ----------------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhh
Confidence 0112368999999999999989999999999999999999
Q ss_pred CCCCCChhhHHHHHhhc--ccCCCchh--hhcCch-hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 267 CPFSTGEEKTRTMSSLR--HRVLPPQL--LLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~pf~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~-~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+-++..+- ..|..+- -...|+.+ +..|.. ..+|++.||..+|++|.|+.++++|||++....
T Consensus 224 EG~PPYsDI-HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 224 EGRPPYSDI-HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPG 291 (502)
T ss_pred cCCCCcccc-cccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence 832222111 1121111 11223322 223433 349999999999999999999999999998755
No 316
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93 E-value=5.8e-26 Score=233.69 Aligned_cols=195 Identities=17% Similarity=0.137 Sum_probs=145.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|||++++++ ++.. ..+++++++ .+++|.+++... ...+++..++.++.||+.||.|||+.|++|
T Consensus 49 e~~~l~~~~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H 123 (254)
T cd05083 49 ETAVMTKLHHKNLVRLLG-VILH----NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVH 123 (254)
T ss_pred HHHHHHhCCCCCcCeEEE-EEcC----CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 455788899999999887 3322 224666666 689999999543 335899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......
T Consensus 124 ~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 153 (254)
T cd05083 124 RDLAARNILVSEDGVAKVSDFGLARVGSMG-------------------------------------------------- 153 (254)
T ss_pred cccCcceEEEcCCCcEEECCCccceecccc--------------------------------------------------
Confidence 999999999999999999999987321000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+..|+|||.+.+..++.++|+|||||++|+|
T Consensus 154 -------------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el 190 (254)
T cd05083 154 -------------------------------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEV 190 (254)
T ss_pred -------------------------------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHH
Confidence 0001224579999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....+.......+...+++.+||..+|..||++.++++
T Consensus 191 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 191 FSYGRAPYPKMSLK-EVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HhCCCCCCccCCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 86 55443332 222233333222222222344559999999999999999999876
No 317
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.93 E-value=5.5e-26 Score=239.23 Aligned_cols=208 Identities=17% Similarity=0.303 Sum_probs=156.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++|+|++++++ .+. .....++++|+ .+++|.+++... .+++..++.++.||+.||.|||+.||+|
T Consensus 66 ~e~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~givH 139 (292)
T cd06657 66 NEVVIMRDYQHENVVEMYN-SYL---VGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGVIH 139 (292)
T ss_pred HHHHHHHhcCCcchhheee-EEE---eCCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 3456788899999999888 342 23456777777 688999988443 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++........
T Consensus 140 ~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 171 (292)
T cd06657 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------------ 171 (292)
T ss_pred CCCCHHHEEECCCCCEEEcccccceecccccc------------------------------------------------
Confidence 99999999999999999999998732211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+..|+|||.+.+..++.++|+||+||++|+|
T Consensus 172 ------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el 209 (292)
T cd06657 172 ------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 209 (292)
T ss_pred ------------------------------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCC--chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
++ ||...... .....+.....+ .......+...+++.+||..+|.+||++.++++||||.....+
T Consensus 210 ~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 210 VDGEPPYFNEPPL-KAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 98 55443222 222222222111 1122234556699999999999999999999999999987643
No 318
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.93 E-value=4.5e-26 Score=241.22 Aligned_cols=199 Identities=16% Similarity=0.148 Sum_probs=145.0
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+..++..+ +|+||+++++ ++.. ...+++++|+ .+++|.+++.... ..+++.+++.++.|
T Consensus 57 Ei~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 132 (303)
T cd05088 57 ELEVLCKLGHHPNIINLLG-ACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 132 (303)
T ss_pred HHHHHHHhcCCCCcceEEE-EECC---CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHH
Confidence 44456777 8999999888 4422 2345666666 6899999994321 24789999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++||+||||||+||+++.++.++++|||++...... .
T Consensus 133 i~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~-------------------------------- 178 (303)
T cd05088 133 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--V-------------------------------- 178 (303)
T ss_pred HHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh--h--------------------------------
Confidence 999999999999999999999999999999999999987321000 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
......++..|+|||.+.+..++
T Consensus 179 ---------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 201 (303)
T cd05088 179 ---------------------------------------------------------KKTMGRLPVRWMAIESLNYSVYT 201 (303)
T ss_pred ---------------------------------------------------------hcccCCCcccccCHHHHhccCCc
Confidence 00001235679999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.++|||||||++|||++ ||...... .....+.....+.......+...+++.+||..+|.+||++.++|++
T Consensus 202 ~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 202 TNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999986 55433222 2222232222222222234556699999999999999999999874
No 319
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93 E-value=7.4e-26 Score=232.25 Aligned_cols=201 Identities=18% Similarity=0.210 Sum_probs=146.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|+||+.+++ ++. .....++++++ .|++|.+++.+....+++..++.++.|++.+|+|||++||+||
T Consensus 42 e~~~l~~l~~~~i~~~~~-~~~---~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~ 117 (251)
T cd05041 42 EAEILKQYDHPNIVKLIG-VCV---QKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHR 117 (251)
T ss_pred HHHHHHhCCCCCeEEEEE-EEe---cCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehh
Confidence 344788899999999877 442 22355666666 6999999996555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.........
T Consensus 118 di~p~nili~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------ 149 (251)
T cd05041 118 DLAARNCLVGENNVLKISDFGMSREEEGGIYT------------------------------------------------ 149 (251)
T ss_pred hcCcceEEEcCCCcEEEeeccccccccCCcce------------------------------------------------
Confidence 99999999999999999999988432111000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 150 ----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~ 189 (251)
T cd05041 150 ----------------------------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETF 189 (251)
T ss_pred ----------------------------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHH
Confidence 0000012245699999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+......+..........+++.+||..+|.+|||+.++++
T Consensus 190 t~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 190 SLGDTPYPGMSN-QQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred hccCCCCccCCH-HHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 7 4443332 2222222222111111122345559999999999999999999986
No 320
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.93 E-value=4e-26 Score=234.93 Aligned_cols=200 Identities=19% Similarity=0.209 Sum_probs=152.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|+|++.+++ .+. ....+++++++ .+++|.+++.. ....+++..++.++.||+.||.|||++||+|
T Consensus 48 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H 123 (255)
T cd08219 48 EAVLLAKMKHPNIVAFKE-SFE---ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLH 123 (255)
T ss_pred HHHHHHhCCCCCcceEEE-EEE---ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 445688899999999888 442 23456777777 58999998843 3445899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+....... .+
T Consensus 124 ~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~-------------- 156 (255)
T cd08219 124 RDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------------------------AY-------------- 156 (255)
T ss_pred CCCCcceEEECCCCcEEEcccCcceeecccc---------------------------------cc--------------
Confidence 9999999999999999999999874321110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....|++.|+|||++.+..++.++|+||||+++|+|
T Consensus 157 -------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l 193 (255)
T cd08219 157 -------------------------------------------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYEL 193 (255)
T ss_pred -------------------------------------------cccccCCccccCHHHHccCCcCchhhhhhhchhheeh
Confidence 0013578899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... .....+.....++..........+|+.+||..+|.+|||+.+++.-
T Consensus 194 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 194 CTLKHPFQANSWK-NLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred hhccCCCCCCCHH-HHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 98 66543322 2333333443333222233455699999999999999999999864
No 321
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.2e-26 Score=244.48 Aligned_cols=201 Identities=21% Similarity=0.262 Sum_probs=147.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHhhhc---
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ--- 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qil~~l~~lHs~--- 101 (712)
.+..+|+.+.|||+|.|+| +|.+... ..++|+|| ..|+|.++|..... .++|...++|+.+++.||+|||..
T Consensus 120 ~Ei~~ls~l~H~Nlv~LlG-yC~e~~~--~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~ 196 (361)
T KOG1187|consen 120 NEVEILSRLRHPNLVKLLG-YCLEGGE--HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPP 196 (361)
T ss_pred HHHHHHhcCCCcCcccEEE-EEecCCc--eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCC
Confidence 5666899999999999999 6643332 45555555 68899999955443 799999999999999999999984
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCC-CCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
.||||||||+||||+.+...|++|||+++.... ...
T Consensus 197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~------------------------------------------- 233 (361)
T KOG1187|consen 197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTS------------------------------------------- 233 (361)
T ss_pred CEecCCCCHHHeeECCCCCEEccCccCcccCCccccc-------------------------------------------
Confidence 399999999999999999999999999833211 100
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCccccccc-ccCccccCcccccCCCCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL-METNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
.... .||.+|++||++..+..+.++||||||
T Consensus 234 ------------------------------------------------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFG 265 (361)
T KOG1187|consen 234 ------------------------------------------------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFG 265 (361)
T ss_pred ------------------------------------------------eeeecCCCCccCChhhhccCCcCcccccccch
Confidence 0001 689999999999988899999999999
Q ss_pred HHHHHhhCC---CCCC----hh--hHHHHHhhcc----cCCCchhh-hcCc------hhHHHHHHcCCCCCCCCCCHHHH
Q 005147 260 VLLFELFCP---FSTG----EE--KTRTMSSLRH----RVLPPQLL-LKFP------KEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 260 vll~eLl~p---f~~~----~~--~~~~~~~~~~----~~~~~~~~-~~~~------~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
|+|.||+++ .... .. .......+.. .+..+.+. ..++ ....+..+|++.+|..||++.++
T Consensus 266 VvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~V 345 (361)
T KOG1187|consen 266 VVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQV 345 (361)
T ss_pred HHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHH
Confidence 999999993 2211 11 1111112222 12222222 2222 23378899999999999999997
Q ss_pred hc
Q 005147 320 LQ 321 (712)
Q Consensus 320 L~ 321 (712)
++
T Consensus 346 v~ 347 (361)
T KOG1187|consen 346 VK 347 (361)
T ss_pred HH
Confidence 54
No 322
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.93 E-value=8.1e-26 Score=234.49 Aligned_cols=202 Identities=15% Similarity=0.168 Sum_probs=149.4
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++||||+++++ ++. ....+++++|+ .|++|.+++......++..+++.|+.||+.||.|||++||+||
T Consensus 55 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~ 130 (267)
T cd05066 55 EASIMGQFDHPNIIHLEG-VVT---KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHR 130 (267)
T ss_pred HHHHHHhCCCCCcceEEE-EEe---cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeh
Confidence 455788899999999877 442 23456777776 5899999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+.........
T Consensus 131 dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------ 162 (267)
T cd05066 131 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEA------------------------------------------------ 162 (267)
T ss_pred hhchhcEEECCCCeEEeCCCCcccccccccce------------------------------------------------
Confidence 99999999999999999999988543211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
........++..|+|||.+.+..++.++|+|||||++||++
T Consensus 163 ---------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell 203 (267)
T cd05066 163 ---------------------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 203 (267)
T ss_pred ---------------------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHh
Confidence 00000012356799999998888999999999999999987
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.+...++......+...+++.+||+.+|.+||++.++++
T Consensus 204 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 204 SYGERPYWEMSNQ-DVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred cCCCCCcccCCHH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 5 44433222 223333333323332233445669999999999999999999876
No 323
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.93 E-value=6.1e-26 Score=234.27 Aligned_cols=203 Identities=20% Similarity=0.233 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..+++.++|||++++++ .+.+ ...+++++|+ .+++|.+++. .....+++.+++.++.||+.||.|||+.|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (260)
T cd08222 51 QEAQLLSKLDHPAIVKFHA-SFLE---RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR 126 (260)
T ss_pred HHHHHHHhCCCCcHHHHHH-HHhc---CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3445788899999999887 4422 2356777776 6889998883 23456899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
++|+||+|+||+++ ++.++++|||.+....... +
T Consensus 127 i~h~~l~~~nili~-~~~~~l~d~g~~~~~~~~~---------------------------------~------------ 160 (260)
T cd08222 127 ILHRDLKAKNIFLK-NNLLKIGDFGVSRLLMGSC---------------------------------D------------ 160 (260)
T ss_pred ccccCCChhheEee-cCCEeecccCceeecCCCc---------------------------------c------------
Confidence 99999999999996 4679999999874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|+||||+++
T Consensus 161 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~ 195 (260)
T cd08222 161 ---------------------------------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCIL 195 (260)
T ss_pred ---------------------------------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHH
Confidence 00013468889999999888899999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
|+|++ ||..... ......+.....+.......+...+++.+||..+|.+||++.++++||||
T Consensus 196 ~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 196 YEMCCLAHAFEGQNF-LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHhCCCCCCCccH-HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 99998 5543332 23333333333333222233455699999999999999999999999997
No 324
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=5.2e-26 Score=241.14 Aligned_cols=201 Identities=16% Similarity=0.163 Sum_probs=147.3
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
+..++..+ +|||++.+++ ++.. ...+++++|+ .+++|.++|... ...++..+++.++.|
T Consensus 73 e~~~l~~l~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 148 (307)
T cd05098 73 EMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQ 148 (307)
T ss_pred HHHHHHHhcCCCCEeeEEE-EEec---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHH
Confidence 44566666 7999999888 4432 2356667766 588999999432 124788999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||++||+||||||+||+++.++.++++|||.+.........
T Consensus 149 i~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-------------------------------- 196 (307)
T cd05098 149 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-------------------------------- 196 (307)
T ss_pred HHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh--------------------------------
Confidence 999999999999999999999999999999999999987433111000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
. ......++..|+|||.+.+..++
T Consensus 197 ---------------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~~~~ 220 (307)
T cd05098 197 ---------------------------------------------------K-----KTTNGRLPVKWMAPEALFDRIYT 220 (307)
T ss_pred ---------------------------------------------------h-----ccccCCCccceeChHHhccCCCC
Confidence 0 00001235679999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||.. .........+.....+...........+++.+||..+|.+|||+.++++
T Consensus 221 ~~~DvwslG~~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 221 HQSDVWSFGVLLWEIFTLGGSPYPG-VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred cHHHHHHHHHHHHHHHcCCCCCCCc-CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999999999999986 4432 2233333334333333322233455569999999999999999999987
No 325
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.93 E-value=9.9e-26 Score=234.17 Aligned_cols=199 Identities=19% Similarity=0.173 Sum_probs=149.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|||++++++ ++.+ ..+++++|+ .+++|.+++.+....+++..++.++.||+.||+|||+.|++|+
T Consensus 57 e~~~l~~~~h~~i~~~~~-~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~ 131 (270)
T cd05056 57 EAYIMRQFDHPHIVKLIG-VITE----NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHR 131 (270)
T ss_pred HHHHHHhCCCCchhceeE-EEcC----CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 445788899999999887 5543 234566665 6899999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||+++........
T Consensus 132 dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------ 163 (270)
T cd05056 132 DIAARNVLVSSPDCVKLGDFGLSRYLEDESYY------------------------------------------------ 163 (270)
T ss_pred ccChheEEEecCCCeEEccCceeeecccccce------------------------------------------------
Confidence 99999999999999999999987432110000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+....++.++|||||||++|||+
T Consensus 164 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 202 (270)
T cd05056 164 -----------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202 (270)
T ss_pred -----------------------------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHH
Confidence 000022356799999998888999999999999999988
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.....++......+...+++.+|+..+|.+|||+.+++.
T Consensus 203 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 203 MLGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5 66544433 223333333333322233455669999999999999999999876
No 326
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.93 E-value=1.2e-25 Score=232.11 Aligned_cols=199 Identities=16% Similarity=0.157 Sum_probs=149.7
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..++|+|++++++ ++. ....+++++|+ .+++|.+++.+ .+..+++..++.++.||+.||.|||++||+|
T Consensus 52 e~~~l~~l~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h 127 (261)
T cd05148 52 EVQALKRLRHKHLISLFA-VCS---VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIH 127 (261)
T ss_pred HHHHHhcCCCcchhheee-eEe---cCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 445678899999999887 442 23456777777 58899999954 3455899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+....... +
T Consensus 128 ~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~----------------------------------~-------------- 159 (261)
T cd05148 128 RDLAARNILVGEDLVCKVADFGLARLIKEDV----------------------------------Y-------------- 159 (261)
T ss_pred cccCcceEEEcCCceEEEccccchhhcCCcc----------------------------------c--------------
Confidence 9999999999999999999999884331110 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+ .....++..|+|||.+.+..++.++|||||||++|+|
T Consensus 160 ~------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l 197 (261)
T cd05148 160 L------------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEM 197 (261)
T ss_pred c------------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 0 0002346679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++......+...+++.+||..+|.+|||+.++++
T Consensus 198 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 198 FTYGQVPYPGMNN-HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HcCCCCCCCcCCH-HHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 96 4543332 2233333333222333333455669999999999999999999876
No 327
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93 E-value=8e-26 Score=235.94 Aligned_cols=206 Identities=18% Similarity=0.205 Sum_probs=154.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..++|||++.+++ .+. ....+++++|+ .+++|.+++... .+++..+..++.||+.++.|||+.|++|
T Consensus 51 ~e~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h 124 (277)
T cd06641 51 QEITVLSQCDSPYVTKYYG-SYL---KDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKIH 124 (277)
T ss_pred HHHHHHHhcCCCCEeEEEE-EEE---eCCeEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCeec
Confidence 3455788899999999888 442 23456777777 588999998543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||++...... ++
T Consensus 125 ~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~----------------------------------~~-------------- 156 (277)
T cd06641 125 RDIKAANVLLSEHGEVKLADFGVAGQLTDT----------------------------------QI-------------- 156 (277)
T ss_pred CCCCHHhEEECCCCCEEEeecccceecccc----------------------------------hh--------------
Confidence 999999999999999999999987332110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|+.+|+|||.+.+..++.++|+|||||++|+|
T Consensus 157 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l 194 (277)
T cd06641 157 ------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 194 (277)
T ss_pred ------------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHH
Confidence 00013578899999999888889999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||..... ......+.....+...........+++.+||..+|.+||++.++++||||....
T Consensus 195 ~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 195 AKGEPPHSELHP-MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HcCCCCCCccch-HHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 99 4432222 122222222222222122234456999999999999999999999999998753
No 328
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=9.1e-26 Score=234.57 Aligned_cols=198 Identities=15% Similarity=0.146 Sum_probs=143.8
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+..++..+ +||||+++++ .+.. ...+++++|+ .+++|.+++.... ..+++.+++.++.|
T Consensus 45 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 120 (270)
T cd05047 45 ELEVLCKLGHHPNIINLLG-ACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120 (270)
T ss_pred HHHHHHhhccCCCeeeEEE-EEec---CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHH
Confidence 44456667 8999999888 4422 2235666666 6899999984321 24788999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||+.||+||||||+||+++.++.++++|||++...... .
T Consensus 121 i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--~-------------------------------- 166 (270)
T cd05047 121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--V-------------------------------- 166 (270)
T ss_pred HHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh--h--------------------------------
Confidence 999999999999999999999999999999999999987311000 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
.......+..|+|||.+.+..++
T Consensus 167 ---------------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~ 189 (270)
T cd05047 167 ---------------------------------------------------------KKTMGRLPVRWMAIESLNYSVYT 189 (270)
T ss_pred ---------------------------------------------------------hccCCCCccccCChHHHccCCCC
Confidence 00001225579999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||..... ......+.....+...........+++.+||..+|.+|||+.++++
T Consensus 190 ~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 190 TNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred chhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 99999999999999995 5543222 2233333332222222223345569999999999999999999986
No 329
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.93 E-value=8.7e-26 Score=236.09 Aligned_cols=200 Identities=17% Similarity=0.143 Sum_probs=147.4
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC--------------CCCChhHHHHHHHHHHH
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFRQIVE 93 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~--------------~~l~~~~~~~i~~qil~ 93 (712)
..+++.+.|+||+++++ ++.. ...+++++++ .+++|.+++.... ..+++..++.++.||+.
T Consensus 58 ~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 133 (280)
T cd05092 58 AELLTVLQHQHIVRFYG-VCTE---GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIAS 133 (280)
T ss_pred HHHHhcCCCCCCceEEE-EEec---CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHH
Confidence 34678899999999877 4422 2346677766 6899999984432 24788999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||.|||++||+||||||+||+++.++.++++|||++.........
T Consensus 134 al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~----------------------------------- 178 (280)
T cd05092 134 GMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY----------------------------------- 178 (280)
T ss_pred HHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCcee-----------------------------------
Confidence 999999999999999999999999999999999987432111000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
. ......+++.|+|||.+.+..++.++
T Consensus 179 ---------------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 205 (280)
T cd05092 179 ---------------------------------R--------------------VGGRTMLPIRWMPPESILYRKFTTES 205 (280)
T ss_pred ---------------------------------e--------------------cCCCccccccccCHHHhccCCcCchh
Confidence 0 00002346789999999988899999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||||++|||++ ||...... ...........+.......+...+++.+||+.+|.+||++.++++
T Consensus 206 Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 206 DIWSFGVVLWEIFTYGKQPWYQLSNT-EAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred hHHHHHHHHHHHHcCCCCCCccCCHH-HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999987 44333222 233333333333222233455669999999999999999999875
No 330
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=1.4e-26 Score=226.99 Aligned_cols=196 Identities=23% Similarity=0.368 Sum_probs=178.1
Q ss_pred hHhHHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCC
Q 005147 473 NFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSK 552 (712)
Q Consensus 473 ~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (712)
.=++.|+.|..+..+..+++.++.+.|+.|||||.++ ++++.||.+.+|++-+
T Consensus 192 ~K~~~Ee~~Pt~l~r~IKFg~KSh~EcA~FSPDgqyL---------------------------vsgSvDGFiEVWny~~ 244 (508)
T KOG0275|consen 192 MKDQEEERYPTQLARSIKFGQKSHVECARFSPDGQYL---------------------------VSGSVDGFIEVWNYTT 244 (508)
T ss_pred hhhhHhhhchHHhhhheecccccchhheeeCCCCceE---------------------------eeccccceeeeehhcc
Confidence 3467789999999888899999999999999999999 7889999999999999
Q ss_pred cEEEEEccC---CceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC
Q 005147 553 LRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 629 (712)
Q Consensus 553 ~~v~~dl~~---~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~ 629 (712)
++++.|++. ..+..|.++|.|++|++|.+++|+|+.||+||+|.+.++.+-.+ ...+|...|+|++|+. +
T Consensus 245 GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRr------FdrAHtkGvt~l~FSr-D 317 (508)
T KOG0275|consen 245 GKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRR------FDRAHTKGVTCLSFSR-D 317 (508)
T ss_pred chhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHH------hhhhhccCeeEEEEcc-C
Confidence 999999984 34778999999999999999999999999999999988655332 2457899999999998 6
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEecee
Q 005147 630 KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 630 ~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
+..++++++|.+|+|.-+.+|++++.|.+|+.-|+.+.|.+ ||+.++|+|.||+|++|+..+.+|+.++--..
T Consensus 318 ~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~-dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~ 390 (508)
T KOG0275|consen 318 NSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTD-DGHHIISASSDGTVKVWHGKTTECLSTFKPLG 390 (508)
T ss_pred cchhhcccccceEEEeccccchhHHHhcCccccccceEEcC-CCCeEEEecCCccEEEecCcchhhhhhccCCC
Confidence 89999999999999999999999999999999999999996 99999999999999999999999988775443
No 331
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.93 E-value=2.2e-26 Score=237.89 Aligned_cols=201 Identities=23% Similarity=0.273 Sum_probs=145.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+...+..++||||+++++ ++. ....+++++|+ .+++|.++|... ...++..++..|+.||+.||.|||+++|+|
T Consensus 51 e~~~l~~l~h~ni~~~~g-~~~---~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH 126 (259)
T PF07714_consen 51 EIQILRKLRHPNIVKLYG-FCI---ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIH 126 (259)
T ss_dssp HHHHHHTHSBTTBE-EEE-EEE---SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred cccccccccccccccccc-ccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 445677889999999888 553 33346777777 578999999554 556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.+||+|||++.........
T Consensus 127 ~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~----------------------------------------------- 159 (259)
T PF07714_consen 127 GNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY----------------------------------------------- 159 (259)
T ss_dssp ST-SGGGEEEETTTEEEEESTTTGEETTTSSSE-----------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-----------------------------------------------
Confidence 999999999999999999999987443111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ......+...|+|||.+.+..++.++||||||+++|||
T Consensus 160 ---------------------~--------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei 198 (259)
T PF07714_consen 160 ---------------------K--------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEI 198 (259)
T ss_dssp ---------------------E--------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHH
T ss_pred ---------------------c--------------------cccccccccccccccccccccccccccccccccccccc
Confidence 0 00002346789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....++..........+++..||..+|.+|||+.+|++
T Consensus 199 ~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 199 LTLGKFPFSDYDN-EEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HTTSSGTTTTSCH-HHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccc-ccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 98 5554432 3334444444333333333445569999999999999999999975
No 332
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=1.1e-25 Score=239.42 Aligned_cols=201 Identities=15% Similarity=0.158 Sum_probs=145.7
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
+..++..+ +||||+++++ ++.. ...+++++|+ .+++|.+++... ...+++.+++.++.|
T Consensus 67 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 142 (314)
T cd05099 67 EMELMKLIGKHKNIINLLG-VCTQ---EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQ 142 (314)
T ss_pred HHHHHHhccCCCCeeeEEE-EEcc---CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHH
Confidence 44466666 6999999887 5532 2346667766 689999999432 134788899999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||.|||++||+||||||+||+++.++.++++|||.++........
T Consensus 143 i~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------- 190 (314)
T cd05099 143 VARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY-------------------------------- 190 (314)
T ss_pred HHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccc--------------------------------
Confidence 999999999999999999999999999999999999988543211000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
.. .....++..|+|||.+.+..++
T Consensus 191 ---------------------------------------------------~~-----~~~~~~~~~y~aPE~~~~~~~~ 214 (314)
T cd05099 191 ---------------------------------------------------KK-----TSNGRLPVKWMAPEALFDRVYT 214 (314)
T ss_pred ---------------------------------------------------cc-----cccCCCCccccCHHHHccCCcC
Confidence 00 0001234579999999888899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|+|++ ||.... .......+.....+...........+++.+||..+|++|||+.++++
T Consensus 215 ~~~DiwslG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 215 HQSDVWSFGILMWEIFTLGGSPYPGIP-VEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred ccchhhHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999999999997 454322 22333333333222222223345569999999999999999999886
No 333
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=2.7e-26 Score=217.23 Aligned_cols=209 Identities=15% Similarity=0.215 Sum_probs=156.4
Q ss_pred eccceeeccCC-CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.|+..+|..+. ||||+++++ +..+.....+-.+.++....+...+. +.++..+++.++.||+.||+|||++||+
T Consensus 80 kREikIL~nL~gg~NIi~L~D-iV~Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GIm 154 (338)
T KOG0668|consen 80 KREIKILQNLRGGPNIIKLLD-IVKDPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIM 154 (338)
T ss_pred HHHHHHHHhccCCCCeeehhh-hhcCccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcc
Confidence 37777888875 999999999 55555555555666666788877754 4488899999999999999999999999
Q ss_pred eccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||+||.|++|+.. ..+++||+|++..+.... +
T Consensus 155 HRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~---------------------------------e------------- 188 (338)
T KOG0668|consen 155 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---------------------------------E------------- 188 (338)
T ss_pred cccCCcceeeechhhceeeeeecchHhhcCCCc---------------------------------e-------------
Confidence 99999999999954 569999999984331110 0
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll 262 (712)
-...+.+..|.-||.+...+ |+.+-|+|||||+|
T Consensus 189 ---------------------------------------------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~Gcml 223 (338)
T KOG0668|consen 189 ---------------------------------------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 223 (338)
T ss_pred ---------------------------------------------eeeeeehhhcCCchheeechhccccHHHHHHHHHH
Confidence 01145678899999998766 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc---------------cCCCchh--------------------hh-cCchhHHHHH
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH---------------RVLPPQL--------------------LL-KFPKEASFCL 303 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~---------------~~~~~~~--------------------~~-~~~~~~~li~ 303 (712)
..|+. ||+.+.......-.+.+ -.+++.+ .. ..|+..+|+.
T Consensus 224 A~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlld 303 (338)
T KOG0668|consen 224 ASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLD 303 (338)
T ss_pred HHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHH
Confidence 99998 88866443333221110 0111111 01 1256679999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|.+|..+|+|+.|++.||||.....
T Consensus 304 klLrYDHqeRlTakEam~HpyF~~~~~ 330 (338)
T KOG0668|consen 304 KLLRYDHQERLTAKEAMAHPYFAPVRE 330 (338)
T ss_pred HHHhhccccccchHHHhcCchHHHHHH
Confidence 999999999999999999999986543
No 334
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.93 E-value=1.1e-25 Score=235.58 Aligned_cols=206 Identities=20% Similarity=0.155 Sum_probs=145.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+|+.++|||++++++.++ ......+++++|+ .+++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 54 ~e~~~l~~l~h~~iv~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H 131 (284)
T cd05081 54 REIEILKSLQHDNIVKYKGVCY--SAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVH 131 (284)
T ss_pred HHHHHHHhCCCCCeeEEEEEEc--cCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 4555788899999999877333 2233456777776 589999999654445899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++....... .+
T Consensus 132 ~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~-------------- 164 (284)
T cd05081 132 RDLATRNILVESENRVKIGDFGLTKVLPQDK---------------------------------EY-------------- 164 (284)
T ss_pred ccCCHhhEEECCCCeEEECCCcccccccCCC---------------------------------cc--------------
Confidence 9999999999999999999999884321110 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
... .....++..|+|||.+.+..++.++|||||||++|||
T Consensus 165 ---------------------------------------~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 204 (284)
T cd05081 165 ---------------------------------------YKV-REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 204 (284)
T ss_pred ---------------------------------------eee-cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHH
Confidence 000 0001234569999999888899999999999999999
Q ss_pred hCCCCCChhh-HHHH-----------------HhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FCPFSTGEEK-TRTM-----------------SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~pf~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++........ .... ..+.....++..........+|+.+||..+|++|||+.++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 205 FTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred hhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9821111000 0000 111111111111222345569999999999999999999976
No 335
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.93 E-value=1e-25 Score=231.19 Aligned_cols=203 Identities=19% Similarity=0.243 Sum_probs=154.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++|+|++++++ ++.. ...+++++++ .+++|.+++... ..+++..+..++.||+.||.|||+.||+|
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H 122 (254)
T cd06627 48 QEIDLLKNLKHPNIVKYIG-SIET---SDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIH 122 (254)
T ss_pred HHHHHHHhCCCCCccEEEE-EEEe---CCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 3444578889999999877 3322 2456677776 688999999554 45899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.........
T Consensus 123 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------- 155 (254)
T cd06627 123 RDIKAANILTTKDGVVKLADFGVATKLNDVSKD----------------------------------------------- 155 (254)
T ss_pred CCCCHHHEEECCCCCEEEeccccceecCCCccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....++..|+|||.+.+..++.++|||+||+++|+|
T Consensus 156 -------------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l 192 (254)
T cd06627 156 -------------------------------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIEL 192 (254)
T ss_pred -------------------------------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHH
Confidence 0013568899999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||...... ..+........+.......+...+++.+||..+|++|||+.+++.||||
T Consensus 193 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 193 LTGNPPYYDLNPM-AALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HhCCCCCCCccHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 99 55443332 2222333333333222333455699999999999999999999999997
No 336
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.93 E-value=1.1e-25 Score=236.41 Aligned_cols=201 Identities=16% Similarity=0.177 Sum_probs=147.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-----------------------CCCCChhH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSVDVYE 83 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-----------------------~~~l~~~~ 83 (712)
+..+|+.++||||+++++ .+.. ....++++++ .+++|.+++... ...+++..
T Consensus 53 E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 128 (290)
T cd05045 53 EFNLLKQVNHPHVIKLYG-ACSQ---DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGD 128 (290)
T ss_pred HHHHHhhCCCCCEeeEEE-EEec---CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHH
Confidence 455788899999999887 4422 2334555555 689999998431 13478889
Q ss_pred HHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHh
Q 005147 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (712)
Q Consensus 84 ~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (712)
++.++.||+.||.|||+.||+||||||+||+++.++.++++|||+++......
T Consensus 129 ~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~--------------------------- 181 (290)
T cd05045 129 LISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED--------------------------- 181 (290)
T ss_pred HHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCcc---------------------------
Confidence 99999999999999999999999999999999999999999999874321110
Q ss_pred hhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccc
Q 005147 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (712)
Q Consensus 164 ~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (712)
+. .......++..|+|||.
T Consensus 182 ------~~-------------------------------------------------------~~~~~~~~~~~y~apE~ 200 (290)
T cd05045 182 ------SY-------------------------------------------------------VKRSKGRIPVKWMAIES 200 (290)
T ss_pred ------ch-------------------------------------------------------hcccCCCCCccccCHHH
Confidence 00 00000234668999999
Q ss_pred ccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 244 LAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 244 ~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
+.+..++.++|||||||++|||++ ||.... .......+.....++..........+|+.+||..+|.+||++.++
T Consensus 201 ~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i 279 (290)
T cd05045 201 LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA-PERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADI 279 (290)
T ss_pred HccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 988889999999999999999997 554332 233334433333222222333456699999999999999999999
Q ss_pred hc
Q 005147 320 LQ 321 (712)
Q Consensus 320 L~ 321 (712)
++
T Consensus 280 ~~ 281 (290)
T cd05045 280 SK 281 (290)
T ss_pred HH
Confidence 76
No 337
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.93 E-value=1e-25 Score=238.51 Aligned_cols=202 Identities=16% Similarity=0.116 Sum_probs=147.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+++.++|||++++++ .+... ..+++++++.+++|.+++......+++..+..++.||+.||.|||++||+|+
T Consensus 58 ~e~~~~~~l~h~niv~~~~-~~~~~---~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~ 133 (303)
T cd05110 58 DEALIMASMDHPHLVRLLG-VCLSP---TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 133 (303)
T ss_pred HHHHHHHhCCCCCcccEEE-EEcCC---CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecc
Confidence 3455788899999999888 44322 2334444557899999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||+++........ +
T Consensus 134 dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~--------------- 166 (303)
T cd05110 134 DLAARNVLVKSPNHVKITDFGLARLLEGDEKE--------------------------------Y--------------- 166 (303)
T ss_pred ccccceeeecCCCceEEccccccccccCcccc--------------------------------c---------------
Confidence 99999999999999999999988533111000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 167 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~ 205 (303)
T cd05110 167 -----------------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 205 (303)
T ss_pred -----------------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHH
Confidence 000023467899999998888999999999999999998
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ......+.....++..........+++.+|+..+|++||++.++++
T Consensus 206 t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 206 TFGGKPYDGIPT-REIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred hCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5 5543321 1222222222222222223345668999999999999999999876
No 338
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.93 E-value=1.4e-25 Score=232.76 Aligned_cols=202 Identities=13% Similarity=0.169 Sum_probs=150.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++++++ ++.. ...+++++|+ .+++|.+++......+++.+++.++.|++.||+|||+.||+|+
T Consensus 56 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~ 131 (268)
T cd05063 56 EASIMGQFSHHNIIRLEG-VVTK---FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHR 131 (268)
T ss_pred HHHHHhcCCCCCeeEEEE-EEcc---CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 345688899999999887 4432 2355677766 6889999996555568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++......... .+
T Consensus 132 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-------------------------------~~--------------- 165 (268)
T cd05063 132 DLAARNILVNSNLECKVSDFGLSRVLEDDPEG-------------------------------TY--------------- 165 (268)
T ss_pred ccchhhEEEcCCCcEEECCCccceeccccccc-------------------------------ce---------------
Confidence 99999999999999999999987432111000 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......+..|+|||.+.+..++.++|||||||++|||+
T Consensus 166 -----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell 204 (268)
T cd05063 166 -----------------------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVM 204 (268)
T ss_pred -----------------------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHH
Confidence 000012245799999998888999999999999999988
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||..... ...+..+......+......+...+++.+||..+|.+||++.++++
T Consensus 205 ~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 205 SFGERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred hCCCCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6 5543332 2344444443333333334455669999999999999999999986
No 339
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.93 E-value=1.1e-25 Score=231.75 Aligned_cols=201 Identities=15% Similarity=0.188 Sum_probs=148.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..++..++|||++++++ ++.. ...+++++++ .+++|.+++......+++..++.++.|++.+|.|||+.|++|+
T Consensus 49 e~~~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~ 124 (256)
T cd05112 49 EAQVMMKLSHPKLVQLYG-VCTE---RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHR 124 (256)
T ss_pred HHHHHHhCCCCCeeeEEE-EEcc---CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 445788899999999887 4422 2356677776 6899999996554558999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+...+.....
T Consensus 125 dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------------ 156 (256)
T cd05112 125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQYT------------------------------------------------ 156 (256)
T ss_pred ccccceEEEcCCCeEEECCCcceeecccCccc------------------------------------------------
Confidence 99999999999999999999987433211000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 157 -----------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~ 195 (256)
T cd05112 157 -----------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred -----------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHH
Confidence 000023456899999998888999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+ ||.... .......+.....+...........+|+.+||..+|.+|||+.+++++
T Consensus 196 ~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 196 SEGKTPYENRS-NSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred cCCCCCCCcCC-HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 7 454322 223333333322211111123445599999999999999999999873
No 340
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.9e-26 Score=226.82 Aligned_cols=204 Identities=19% Similarity=0.261 Sum_probs=160.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..-.||-+..+-+ .+ ...+++|.|||| .||.|.-.| ++.+.+++..++.+-..|+.||.|||+++||.|
T Consensus 218 E~RVL~~~~HPFLt~LKY-sF---Qt~drlCFVMeyanGGeLf~HL-srer~FsE~RtRFYGaEIvsAL~YLHs~~ivYR 292 (516)
T KOG0690|consen 218 ENRVLQNCRHPFLTSLKY-SF---QTQDRLCFVMEYANGGELFFHL-SRERVFSEDRTRFYGAEIVSALGYLHSRNIVYR 292 (516)
T ss_pred HHHHHHhccCcHHHHhhh-hh---ccCceEEEEEEEccCceEeeeh-hhhhcccchhhhhhhHHHHHHhhhhhhCCeeee
Confidence 344577788998766544 22 456789999999 699999888 345569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||.+|.|++.+|++||.|||+|+.--.. | +
T Consensus 293 DlKLENLlLDkDGHIKitDFGLCKE~I~~----g-----------------------------~---------------- 323 (516)
T KOG0690|consen 293 DLKLENLLLDKDGHIKITDFGLCKEEIKY----G-----------------------------D---------------- 323 (516)
T ss_pred echhhhheeccCCceEeeecccchhcccc----c-----------------------------c----------------
Confidence 99999999999999999999999531110 0 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
+....+|||.|.|||++....|+.++|+|.+||++|||+
T Consensus 324 -----------------------------------------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMm 362 (516)
T KOG0690|consen 324 -----------------------------------------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMM 362 (516)
T ss_pred -----------------------------------------eeccccCChhhcCchhhccccccceeehhhhhHHHHHHH
Confidence 011268999999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhc-c-cCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCcC
Q 005147 267 C---PFSTGEEKTRTMSSLR-H-RVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPRD 330 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~~ 330 (712)
| ||...+.. .....+. . -.+|. ...+++..|+..+|..||.+|. .+.||.+|+||.....
T Consensus 363 CGRLPFyn~dh~-kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 363 CGRLPFYNKDHE-KLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred hccCcccccchh-HHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence 9 78765433 2222221 1 12332 2346667999999999999996 4899999999998754
No 341
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.5e-26 Score=247.67 Aligned_cols=200 Identities=19% Similarity=0.235 Sum_probs=155.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|.-++.+++|||||++|| +. ....+++|+||+ .||+|.++|++....++..+...++.+.+.||+|||++++||
T Consensus 210 ~EArvMr~l~H~NVVr~yG-Va---~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IH 285 (474)
T KOG0194|consen 210 KEARVMRQLNHPNVVRFYG-VA---VLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIH 285 (474)
T ss_pred HHHHHHHhCCCCCEEEEEE-EE---cCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcc
Confidence 4555778899999999888 44 344688999998 599999999777667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|+|++.++.+||+|||+++.-...... . +
T Consensus 286 RDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~-------------------------------~-------------~- 320 (474)
T KOG0194|consen 286 RDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK-------------------------------K-------------F- 320 (474)
T ss_pred hhHhHHHheecCCCeEEeCccccccCCcceeec-------------------------------c-------------c-
Confidence 999999999999999999999997321100000 0 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
...-...|+|||.+....|++++||||+||++||+
T Consensus 321 ---------------------------------------------~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 321 ---------------------------------------------LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred ---------------------------------------------cccCcceecChhhhccCccccccchhheeeeEEee
Confidence 00114569999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchh-HHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.+.... .+...+....++...+...|.. ..++.+|+..+|+.|||+.++.+
T Consensus 356 f~~g~~Py~g~~~~-~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 356 FENGAEPYPGMKNY-EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred eccCCCCCCCCCHH-HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 98 77765554 4445553333333333344444 47889999999999999999866
No 342
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.93 E-value=1.9e-26 Score=245.83 Aligned_cols=200 Identities=18% Similarity=0.234 Sum_probs=151.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
|...|+.-.|.||+-+.| ++- ...+.|+..+ .|.+|..+|.....+|.....+.|++||++|++|||.++||||
T Consensus 438 EVa~lkkTRH~NIlLFMG-~~~----~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHr 512 (678)
T KOG0193|consen 438 EVAVLKKTRHENILLFMG-ACM----NPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHR 512 (678)
T ss_pred HHHHHhhcchhhheeeeh-hhc----CCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 344789999999988777 542 2234666666 5999999997666779999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|||..||++..++.|||.|||++.....- .+
T Consensus 513 DLKSnNIFl~~~~kVkIgDFGLatvk~~w-------------------------------------------------~g 543 (678)
T KOG0193|consen 513 DLKSNNIFLHEDLKVKIGDFGLATVKTRW-------------------------------------------------SG 543 (678)
T ss_pred hccccceEEccCCcEEEecccceeeeeee-------------------------------------------------cc
Confidence 99999999999999999999987321110 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---CCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvll~ 263 (712)
.++ .....|...|||||+++.+ +|++.||||||||++|
T Consensus 544 -----------------------------------~~q----~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~Y 584 (678)
T KOG0193|consen 544 -----------------------------------EQQ----LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWY 584 (678)
T ss_pred -----------------------------------ccc----cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHH
Confidence 000 0013467789999999754 4999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCch---hhhcCc-hhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||+| ||. .......+-.+..+...+. .....+ +..+|+..||..++++||.+.+||.
T Consensus 585 ELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 585 ELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 9999 777 4444344434444433332 233445 4459999999999999999999887
No 343
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.93 E-value=1.6e-25 Score=232.05 Aligned_cols=201 Identities=17% Similarity=0.221 Sum_probs=149.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+..++..++|+|++++++ .+.. ...+++++++ .|++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 51 ~e~~~l~~~~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08229 51 KEIDLLKQLNHPNVIKYYA-SFIE---DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR 126 (267)
T ss_pred HHHHHHHHccCCchhhhhh-eeEe---CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3456788899999999888 3322 2345666666 68999998842 2345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||||+||+++.++.++++|||.+........
T Consensus 127 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 161 (267)
T cd08229 127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--------------------------------------------- 161 (267)
T ss_pred eecCCCCHHHEEEcCCCCEEECcchhhhccccCCc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|+..|+|||.+.+..++.++|+||||+++
T Consensus 162 ---------------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il 196 (267)
T cd08229 162 ---------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred ---------------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred HHhhC---CCCCChhh-HHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEEK-TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||...... ......+.....++.... ..+...+++.+||..+|.+|||+.+|++
T Consensus 197 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 197 YEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 99998 55433221 222233333333333222 2345559999999999999999998875
No 344
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93 E-value=1.4e-25 Score=230.58 Aligned_cols=200 Identities=20% Similarity=0.272 Sum_probs=150.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCC-CChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~-l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+...+..++|+|++++++ .+.+. ..+++++++ .+++|.+++...... +++.+++.++.||+.||.|||+.||+|
T Consensus 51 e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h 126 (258)
T smart00219 51 EARIMRKLDHPNIVKLLG-VCTEE---EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIH 126 (258)
T ss_pred HHHHHHhcCCCchheEEE-EEcCC---CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeee
Confidence 345677789999999888 44222 345666666 689999999554333 899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++.........
T Consensus 127 ~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------------------------- 159 (258)
T smart00219 127 RDLAARNCLVGENLVVKISDFGLSRDLYDDDYY----------------------------------------------- 159 (258)
T ss_pred cccccceEEEccCCeEEEcccCCceeccccccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 160 ------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l 197 (258)
T smart00219 160 ------------------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEI 197 (258)
T ss_pred ------------------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHH
Confidence 00001257789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.. .........+.....+...........+++.+||..+|.+|||+.++++
T Consensus 198 ~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 198 FTLGESPYPG-MSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HhCCCCCCCC-CCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 87 3332 2333344444444433333334455569999999999999999999986
No 345
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=240.88 Aligned_cols=204 Identities=16% Similarity=0.210 Sum_probs=166.3
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
++-....|-||++|. .|.+.. +.|++++-+.||.|...|+.++. ++...++.|+..+++|++|||++|||.|||||
T Consensus 473 Im~~~~s~fIvrLYr-Tfrd~k--yvYmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKP 548 (732)
T KOG0614|consen 473 IMMECRSDFIVRLYR-TFRDSK--YVYMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLHRKGIIYRDLKP 548 (732)
T ss_pred HHHhcCchHHHHHHH-Hhccch--hhhhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHHhcCceeccCCh
Confidence 455566888999887 564433 33445555579999999977665 99999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+|.+++..|-+|+.|||+++..|...
T Consensus 549 ENllLd~~Gy~KLVDFGFAKki~~g~------------------------------------------------------ 574 (732)
T KOG0614|consen 549 ENLLLDNRGYLKLVDFGFAKKIGSGR------------------------------------------------------ 574 (732)
T ss_pred hheeeccCCceEEeehhhHHHhccCC------------------------------------------------------
Confidence 99999999999999999997654331
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--- 267 (712)
+....+|||.|.|||++.....+.++|.|+||+++||||+
T Consensus 575 -------------------------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~p 617 (732)
T KOG0614|consen 575 -------------------------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSP 617 (732)
T ss_pred -------------------------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCC
Confidence 1112689999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHHhhcccCCCchhhhcCchhH-HHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
||. ..+....+..+.+++-...++...++.+ ++|+++...+|.+|.. +.+|-+|.||.....
T Consensus 618 PFs-~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 618 PFS-GVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred CCC-CCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 554 4455567777777765555556666555 9999999999999985 899999999998754
No 346
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.93 E-value=1.4e-25 Score=236.33 Aligned_cols=201 Identities=16% Similarity=0.163 Sum_probs=146.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------CCCChhHHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----------~~l~~~~~~~i~~qil~~l~ 96 (712)
+..++..+.|||++++++ ++..+ ..+++++++ .+++|.++|.... ..+++..++.++.||+.||+
T Consensus 69 e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~ 144 (296)
T cd05051 69 EVKILSRLSDPNIARLLG-VCTVD---PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMR 144 (296)
T ss_pred HHHHHHhcCCCCEeEEEE-EEecC---CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHH
Confidence 455788899999999887 44322 456677766 6899999984432 25899999999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||+.||+||||||+||+++.++.++++|||++........ +.
T Consensus 145 ~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------~~---- 187 (296)
T cd05051 145 YLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY---------------------------------YR---- 187 (296)
T ss_pred HHHHcCccccccchhceeecCCCceEEccccceeecccCcc---------------------------------ee----
Confidence 99999999999999999999999999999998743211100 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
......++..|+|||.+.+..++.++|||
T Consensus 188 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~ 216 (296)
T cd05051 188 ---------------------------------------------------VQGRAPLPIRWMAWESVLLGKFTTKSDVW 216 (296)
T ss_pred ---------------------------------------------------ecCcCCCCceecCHHHhhcCCCCccchhh
Confidence 00013457789999999888899999999
Q ss_pred HHHHHHHHhhC-----CCCCChhhHHHHHhhccc-------CCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC-----PFSTGEEKTRTMSSLRHR-------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~-----pf~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ||...... ..+..+... ...+..........+++.+||+.+|.+|||+.++++
T Consensus 217 slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 217 AFGVTLWEILTLCREQPYEHLTDQ-QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hhHHHHHHHHhcCCCCCCCCcChH-HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 99999999986 44332221 222222211 111111112245569999999999999999999976
No 347
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.93 E-value=1.6e-25 Score=234.98 Aligned_cols=202 Identities=15% Similarity=0.132 Sum_probs=149.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------------CCCCChhHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------KRSVDVYEC 84 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------------~~~l~~~~~ 84 (712)
++..+++.++|||++++++ ++.+ ...+++++|+ .+++|.+++... ...+++.++
T Consensus 57 ~ei~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 132 (288)
T cd05050 57 REAALMAEFDHPNIVKLLG-VCAV---GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132 (288)
T ss_pred HHHHHHHhcCCCchheEEE-EEcC---CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHH
Confidence 3555788899999999887 5533 2356777777 688999999421 124678889
Q ss_pred HHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhh
Q 005147 85 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 164 (712)
Q Consensus 85 ~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (712)
+.++.||+.||+|||++|++||||||+||+++.++.++++|||++........
T Consensus 133 ~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------- 185 (288)
T cd05050 133 LCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY--------------------------- 185 (288)
T ss_pred HHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcc---------------------------
Confidence 99999999999999999999999999999999999999999998743211100
Q ss_pred hccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc
Q 005147 165 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 244 (712)
Q Consensus 165 ~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 244 (712)
+ . .......+..|+|||.+
T Consensus 186 ------~----------------------~---------------------------------~~~~~~~~~~y~aPE~~ 204 (288)
T cd05050 186 ------Y----------------------K---------------------------------ASENDAIPIRWMPPESI 204 (288)
T ss_pred ------c----------------------c---------------------------------ccCCCccChhhcCHHHH
Confidence 0 0 00001235579999999
Q ss_pred cCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 245 AGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 245 ~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
.+..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||+.+|.+|||+.|++
T Consensus 205 ~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~ 283 (288)
T cd05050 205 FYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-EEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASIN 283 (288)
T ss_pred hcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 88889999999999999999986 5543332 233344444333322223345566999999999999999999987
Q ss_pred c
Q 005147 321 Q 321 (712)
Q Consensus 321 ~ 321 (712)
+
T Consensus 284 ~ 284 (288)
T cd05050 284 R 284 (288)
T ss_pred H
Confidence 6
No 348
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.93 E-value=1.7e-25 Score=229.13 Aligned_cols=201 Identities=19% Similarity=0.236 Sum_probs=153.4
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++|+|++.+++ .++ .....++++++. +++|.+++.... .+++.++..++.||+.||.|||++|++|+
T Consensus 43 e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~H~ 117 (250)
T cd05123 43 ERNILSRINHPFIVKLHY-AFQ---TEEKLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGIIYR 117 (250)
T ss_pred HHHHHHHcCCCcHHHHHH-Hee---cCCeeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 345788899999999887 442 334567777775 999999995543 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+....... +
T Consensus 118 ~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------~---------------- 148 (250)
T cd05123 118 DLKPENILLDADGHIKLTDFGLAKELSSEG---------------------------------S---------------- 148 (250)
T ss_pred CCCcceEEEcCCCcEEEeecCcceecccCC---------------------------------C----------------
Confidence 999999999999999999999874321110 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......++..|+|||.+.+..++.++|+||||+++|+|+
T Consensus 149 -----------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~ 187 (250)
T cd05123 149 -----------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEML 187 (250)
T ss_pred -----------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHH
Confidence 000135688899999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH---HHHhcCcCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 325 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~eiL~hp~~ 325 (712)
+ ||..... ......+.... .+..........+++.+||..+|.+||++ .++++||||
T Consensus 188 ~g~~p~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 188 TGKPPFYAEDR-KEIYEKILKDP-LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HCCCCCCCCCH-HHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9 6654433 22222222211 11111123455699999999999999999 999999998
No 349
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=1.4e-25 Score=240.73 Aligned_cols=201 Identities=16% Similarity=0.167 Sum_probs=146.2
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
+..++..+ +||||+.+++ ++.. ...+++++++ .+++|.++|.+. ...++..+++.++.|
T Consensus 67 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 142 (334)
T cd05100 67 EMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQ 142 (334)
T ss_pred HHHHHHhhcCCCCeeeeeE-EEcc---CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHH
Confidence 34466677 8999999888 4432 2345666666 688999999432 224778889999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||.|||++||+||||||+||+++.++.++++|||+++.......
T Consensus 143 i~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--------------------------------- 189 (334)
T cd05100 143 VARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY--------------------------------- 189 (334)
T ss_pred HHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc---------------------------------
Confidence 99999999999999999999999999999999999998854321100
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
++ ......++..|+|||++.+..++
T Consensus 190 ~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 214 (334)
T cd05100 190 YK-------------------------------------------------------KTTNGRLPVKWMAPEALFDRVYT 214 (334)
T ss_pred cc-------------------------------------------------------cccCCCcCceEcCHHHhccCCcC
Confidence 00 00001235679999999988899
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++|||||||++|||++ ||... ........+.....+...........+++.+||+.+|.+|||+.++++
T Consensus 215 ~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 215 HQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred chhhhHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999999999999987 44332 223333333333332222233445569999999999999999999976
No 350
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.93 E-value=1.6e-25 Score=241.23 Aligned_cols=205 Identities=20% Similarity=0.239 Sum_probs=146.6
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------------------- 76 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------------------- 76 (712)
++..+|..+ +||||+++++ ++.. ....+++++|| .+++|.+++....
T Consensus 59 ~E~~~l~~l~~h~niv~~~~-~~~~--~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (343)
T cd05103 59 SELKILIHIGHHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLK 135 (343)
T ss_pred HHHHHHHhccCCccHhhhcc-eeec--CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhh
Confidence 345566777 6899999888 4422 22355666666 6999999984321
Q ss_pred --------------------------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCC
Q 005147 77 --------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF 118 (712)
Q Consensus 77 --------------------------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~ 118 (712)
..++...+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~ 215 (343)
T cd05103 136 RRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEN 215 (343)
T ss_pred hhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCC
Confidence 135777888999999999999999999999999999999999
Q ss_pred CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccc
Q 005147 119 NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVV 198 (712)
Q Consensus 119 ~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (712)
+.++++|||++....... .+
T Consensus 216 ~~~kl~dfg~~~~~~~~~---------------------------------~~--------------------------- 235 (343)
T cd05103 216 NVVKICDFGLARDIYKDP---------------------------------DY--------------------------- 235 (343)
T ss_pred CcEEEEecccccccccCc---------------------------------ch---------------------------
Confidence 999999999884421110 00
Q ss_pred cccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChh
Q 005147 199 LVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEE 274 (712)
Q Consensus 199 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~ 274 (712)
.......++..|+|||.+.+..++.++|||||||++|+|++ ||.....
T Consensus 236 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 287 (343)
T cd05103 236 ----------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 287 (343)
T ss_pred ----------------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc
Confidence 00000234667999999988889999999999999999985 5543322
Q ss_pred hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 275 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.......+.....+.......+...+++.+||+.+|.+|||+.+|++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 288 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred cHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 222333333332222222233456799999999999999999999875
No 351
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.93 E-value=2.3e-25 Score=229.43 Aligned_cols=197 Identities=15% Similarity=0.140 Sum_probs=147.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..++..++|+|++++++ ++.+ ....++++|+ .+++|.+++.... ..+++..+..++.|++.||.|||++||+
T Consensus 49 ~e~~~l~~l~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~ 124 (256)
T cd05039 49 AEASVMTTLRHPNLVQLLG-VVLQ---GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFV 124 (256)
T ss_pred HHHHHHHhcCCcceeeeEE-EEcC---CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3445788899999999888 4432 4556777776 5789999995443 3589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||.++......
T Consensus 125 H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------------------------------------------------ 156 (256)
T cd05039 125 HRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------------------------------------------------ 156 (256)
T ss_pred chhcccceEEEeCCCCEEEccccccccccccc------------------------------------------------
Confidence 99999999999999999999999884321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+..|+|||.+.+..++.++|||||||++|+
T Consensus 157 ---------------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~ 191 (256)
T cd05039 157 ---------------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 191 (256)
T ss_pred ---------------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHH
Confidence 00123557999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||.... .......+.....+.......+...+++.+||..+|++|||+.++++
T Consensus 192 l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 192 IYSFGRVPYPRIP-LKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHhcCCCCCCCCC-HHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 986 444332 22233333332222222222345569999999999999999999976
No 352
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=1.9e-25 Score=226.87 Aligned_cols=216 Identities=16% Similarity=0.197 Sum_probs=173.1
Q ss_pred hhhhhhHhHHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCcccc--------CCCCCCceeeccCCCccceecccCC
Q 005147 468 SRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN--------ERSSINNLGSKEGYSEGRRSGWINP 539 (712)
Q Consensus 468 ~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~l~gh~~~~~~~~~~~~ 539 (712)
+-.+.+...++-.|. ..|...-+..+.||.||..++..+- ...+.-..+|+||++.+.++.| .|
T Consensus 156 ~~~~k~~~~~~l~~S-------Q~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~f-hP 227 (459)
T KOG0272|consen 156 KEALKHLQSLELVCS-------QVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVF-HP 227 (459)
T ss_pred HHHHHHhhhhhhhhh-------hccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEE-cc
Confidence 334445555554443 2344444566778888875433321 1234556799999999999999 77
Q ss_pred CC-CCcEEEEEcCCcEEEEEccC----CceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe
Q 005147 540 FL-EGLCKYLSFSKLRVKADLNQ----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (712)
Q Consensus 540 ~~-~~~~~~~~~~~~~v~~dl~~----~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~ 614 (712)
.. +..++.++.|....+|.+.+ +++.+|...|..++|+|+|++|+|++.|.+-++||+++.. .....-
T Consensus 228 ~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~-------ElL~QE 300 (459)
T KOG0272|consen 228 VDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKS-------ELLLQE 300 (459)
T ss_pred CCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccch-------hhHhhc
Confidence 64 44555666666666699987 4566899999999999999999999999999999998732 223467
Q ss_pred cCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 615 ~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+|...|.+|+|+| +|.+++|||.|..-+|||+|+|.++..+.+|.++|.+|+|+| +|..+||||.|++++|||++...
T Consensus 301 GHs~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsP-NGy~lATgs~Dnt~kVWDLR~r~ 378 (459)
T KOG0272|consen 301 GHSKGVFSIAFQP-DGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSP-NGYHLATGSSDNTCKVWDLRMRS 378 (459)
T ss_pred ccccccceeEecC-CCceeeccCccchhheeecccCcEEEEecccccceeeEeECC-CceEEeecCCCCcEEEeeecccc
Confidence 8999999999999 699999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred EEEEEe
Q 005147 695 LLLHLV 700 (712)
Q Consensus 695 ~v~~~~ 700 (712)
+++++.
T Consensus 379 ~ly~ip 384 (459)
T KOG0272|consen 379 ELYTIP 384 (459)
T ss_pred cceecc
Confidence 877665
No 353
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.93 E-value=1.5e-25 Score=236.18 Aligned_cols=204 Identities=14% Similarity=0.113 Sum_probs=141.8
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~ 111 (712)
+..++|+|++.+++............+++++....++.+.+... ...++..++.|+.||+.||+|||++||+||||||+
T Consensus 77 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~ 155 (294)
T PHA02882 77 IHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPE 155 (294)
T ss_pred hccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 34578999999887222222222234556666666787776433 23678889999999999999999999999999999
Q ss_pred ceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
|||++..+.++++|||+++.+...... . .
T Consensus 156 Nill~~~~~~~l~DFGla~~~~~~~~~--------------------------------~----------~--------- 184 (294)
T PHA02882 156 NIMVDGNNRGYIIDYGIASHFIIHGKH--------------------------------I----------E--------- 184 (294)
T ss_pred HEEEcCCCcEEEEEcCCceeeccCCcc--------------------------------c----------c---------
Confidence 999999999999999998544221000 0 0
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---C
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---p 268 (712)
... .......||+.|+|||...+..++.++|||||||++|||++ |
T Consensus 185 ----------------------------~~~----~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P 232 (294)
T PHA02882 185 ----------------------------YSK----EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLP 232 (294)
T ss_pred ----------------------------ccc----ccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 000 00011468999999999999999999999999999999998 6
Q ss_pred CCCChhhHHH--------HHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 269 FSTGEEKTRT--------MSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 269 f~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|......... ...+..... ..........+++..|+..+|.+||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 233 WKGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 6544221111 111111111 11122234459999999999999999999876
No 354
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.93 E-value=2.3e-25 Score=234.72 Aligned_cols=201 Identities=16% Similarity=0.174 Sum_probs=145.3
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-----------CCCChhHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------RSVDVYECLHIFRQIVEIV 95 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-----------~~l~~~~~~~i~~qil~~l 95 (712)
+..++..++|+|++.+++ ++. .....++++|+ .+++|.+++.... ..+++..++.++.||+.||
T Consensus 67 ei~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 142 (295)
T cd05097 67 EIKIMSRLKNPNIIRLLG-VCV---SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGM 142 (295)
T ss_pred HHHHHHhCCCCCcCeEEE-EEc---CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHH
Confidence 445788899999999888 442 22356667766 6899999984321 2367889999999999999
Q ss_pred HHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 96 ~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
.|||++|++|+||||+||+++.++.+|++|||++........ +
T Consensus 143 ~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------~---- 185 (295)
T cd05097 143 KYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY---------------------------------Y---- 185 (295)
T ss_pred HHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc---------------------------------e----
Confidence 999999999999999999999999999999998743211100 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccch
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (712)
. ......++..|+|||.+.+..++.++||
T Consensus 186 ----------~-----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 214 (295)
T cd05097 186 ----------R-----------------------------------------IQGRAVLPIRWMAWESILLGKFTTASDV 214 (295)
T ss_pred ----------e-----------------------------------------ccCcCcCceeecChhhhccCCcCchhhH
Confidence 0 0001245678999999988889999999
Q ss_pred HHHHHHHHHhhC-----CCCCChhhHHHHHhh-------cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 256 YRLGVLLFELFC-----PFSTGEEKTRTMSSL-------RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 256 wSlGvll~eLl~-----pf~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||++|+|++ ||....... ..... .............+...+|+.+||..+|.+|||+.+|++
T Consensus 215 wSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 215 WAFGVTLWEMFTLCKEQPYSLLSDEQ-VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHHHHHcCCCCCCcccChHH-HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 999999999987 554332221 11111 111111112222345669999999999999999999976
No 355
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=7.5e-26 Score=260.22 Aligned_cols=202 Identities=16% Similarity=0.203 Sum_probs=158.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC------CCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~------~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
++.++++..+|||||.+++ ++.+ ....+++.+++.||+|..||++. ...++..+.+.++.||+.|+.||++
T Consensus 744 ~Ea~~m~~f~HpNiv~liG-v~l~--~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~ 820 (1025)
T KOG1095|consen 744 KEALLMSKFDHPNIVSLIG-VCLD--SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES 820 (1025)
T ss_pred HHHHHHhcCCCcceeeEEE-eecC--CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh
Confidence 5677899999999999999 6644 44455666666899999999776 5668999999999999999999999
Q ss_pred cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
+++|||||-..|+||+....|||+|||++++.-..+.. ++
T Consensus 821 ~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yy----r~------------------------------------ 860 (1025)
T KOG1095|consen 821 KHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYY----RK------------------------------------ 860 (1025)
T ss_pred CCCcCcchhhhheeecccCcEEEcccchhHhhhhchhe----ec------------------------------------
Confidence 99999999999999999999999999999753111000 00
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (712)
. ...+-...|||||.+..+.++.++|||||||
T Consensus 861 ------------------------------------------~------~~a~lPvkWm~PEsl~d~iFtskSDvWsFGV 892 (1025)
T KOG1095|consen 861 ------------------------------------------H------GEAMLPVKWMPPESLKDGIFTSKSDVWSFGV 892 (1025)
T ss_pred ------------------------------------------c------CccccceecCCHHHHhhcccccccchhhhHH
Confidence 0 0012245699999999999999999999999
Q ss_pred HHHHhhC----CCCCChhhHHHHH-hhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 261 LLFELFC----PFSTGEEKTRTMS-SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 261 ll~eLl~----pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+|||+|+ ||....+. +.+. .+..+.++ ..........+++..||+.+|++||++..|++
T Consensus 893 llWEifslG~~PY~~~~n~-~v~~~~~~ggRL~-~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 893 LLWEIFSLGATPYPSRSNF-EVLLDVLEGGRLD-PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHHhCCCCCCCCcchH-HHHHHHHhCCccC-CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 9999999 88766655 4444 44444322 22223334459999999999999999999988
No 356
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.92 E-value=2.4e-25 Score=229.88 Aligned_cols=200 Identities=14% Similarity=0.149 Sum_probs=148.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++|+|++++++ ++. ...+++++++ .+++|.+++.. .+..++..+++.++.||+.||+|||+.|++
T Consensus 50 ~E~~~l~~l~h~~i~~~~~-~~~----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~ 124 (260)
T cd05067 50 AEANLMKQLQHPRLVRLYA-VVT----QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYI 124 (260)
T ss_pred HHHHHHHhcCCcCeeeEEE-EEc----cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 3455788899999999887 442 2345666666 68999999843 344589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||++.........
T Consensus 125 H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------- 158 (260)
T cd05067 125 HRDLRAANILVSETLCCKIADFGLARLIEDNEYT---------------------------------------------- 158 (260)
T ss_pred cccccHHhEEEcCCCCEEEccCcceeecCCCCcc----------------------------------------------
Confidence 9999999999999999999999987432111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 159 -------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~e 195 (260)
T cd05067 159 -------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 195 (260)
T ss_pred -------------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHH
Confidence 0000234678999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+.....++..........+++.+||..+|++|||+++++.
T Consensus 196 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 196 IVTYGRIPYPGMTN-PEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHhCCCCCCCCCCh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 997 5543332 2233333333222222222345569999999999999999999876
No 357
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.92 E-value=2.6e-25 Score=230.67 Aligned_cols=202 Identities=15% Similarity=0.150 Sum_probs=146.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC------CCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~------~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
.+..+++.++||||+++++ ++.. ....++++++ .|++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 48 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (269)
T cd05044 48 KEAHLMSNFNHPNIVKLLG-VCLL---NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE 123 (269)
T ss_pred HHHHHHHhcCCCCeeeEee-eecC---CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH
Confidence 3455788899999999887 4432 2345666665 78999999943 2234788999999999999999999
Q ss_pred hcCceeccCCCCceeecCCC-----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 100 SQGIVVHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~-----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
+.|++|+||||+||+++.++ .++++|||++........ +
T Consensus 124 ~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~--- 167 (269)
T cd05044 124 QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDY---------------------------------Y--- 167 (269)
T ss_pred hCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccc---------------------------------c---
Confidence 99999999999999999877 899999998743211100 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sD 254 (712)
. ......++..|+|||.+.+..++.++|
T Consensus 168 -----------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~~~~~~~D 195 (269)
T cd05044 168 -----------------------------------------------R-----KEGEGLLPVRWMAPESLLDGKFTTQSD 195 (269)
T ss_pred -----------------------------------------------c-----cCcccCCCccccCHHHHccCCcccchh
Confidence 0 000023467899999999888999999
Q ss_pred hHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 255 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 255 IwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||||++|||++ ||..... ......+.....+.......+...+++.+||..+|.+||++.++++
T Consensus 196 v~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 196 VWSFGVLMWEILTLGQQPYPALNN-QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHHHHHHHHcCCCCCcccCH-HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999986 4543332 2233333322222222222344559999999999999999999875
No 358
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.92 E-value=3.1e-25 Score=231.70 Aligned_cols=201 Identities=14% Similarity=0.111 Sum_probs=149.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...++.++|||++++++ ++.. ...++++|+ .+++|.+++......+++..+..++.||+.||+|||++||+|
T Consensus 58 ~e~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H 132 (279)
T cd05057 58 DEAYVMASVDHPHVVRLLG-ICLS----SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVH 132 (279)
T ss_pred HHHHHHHhCCCCCcceEEE-EEec----CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 4556788899999999888 4432 345556655 699999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.++....... .+
T Consensus 133 ~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~--------------------------------~~-------------- 166 (279)
T cd05057 133 RDLAARNVLVKTPQHVKITDFGLAKLLDVDEK--------------------------------EY-------------- 166 (279)
T ss_pred cccCcceEEEcCCCeEEECCCcccccccCccc--------------------------------ce--------------
Confidence 99999999999999999999998854321100 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+....++.++|||||||++|||
T Consensus 167 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el 204 (279)
T cd05057 167 ------------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWEL 204 (279)
T ss_pred ------------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHH
Confidence 00001235679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+......+..........+++.+||..+|..|||+.++++
T Consensus 205 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 205 MTFGAKPYEGIPA-VEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred hcCCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 97 4443322 2223333333222222233455669999999999999999999866
No 359
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.92 E-value=3.9e-25 Score=228.88 Aligned_cols=201 Identities=20% Similarity=0.251 Sum_probs=151.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++|+|++.+++ .+.. ...+++++|+ .|++|.+++.. ....+++.+++.++.||+.||.|||+.|
T Consensus 51 ~ei~~l~~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 126 (267)
T cd08224 51 KEIDLLKQLDHPNVIKYLA-SFIE---NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR 126 (267)
T ss_pred HHHHHHHhCCCCCeeeeee-eeec---CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4456788899999999888 4432 2456777776 68899998842 3445899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+|+||+|+||+++.++.++++|||.+........
T Consensus 127 i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 161 (267)
T cd08224 127 IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--------------------------------------------- 161 (267)
T ss_pred EecCCcChhhEEECCCCcEEEeccceeeeccCCCc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......++..|+|||.+.+..++.++|||||||++
T Consensus 162 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 196 (267)
T cd08224 162 ---------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred ---------------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHHHHH
Confidence 00013568889999999888899999999999999
Q ss_pred HHhhC---CCCCCh-hhHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGE-EKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||.... ........+.....++... .......+++.+||..+|.+|||+.+|++
T Consensus 197 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 197 YEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99998 554332 1223333444444444333 22334559999999999999999999876
No 360
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.92 E-value=3.1e-25 Score=230.35 Aligned_cols=204 Identities=14% Similarity=0.177 Sum_probs=147.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++||||+++++ .+. ....+++++|+ .+++|.+++......+++.+++.++.|++.||.|||++|++|+
T Consensus 55 e~~~l~~l~h~ni~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~ 130 (269)
T cd05065 55 EASIMGQFDHPNIIHLEG-VVT---KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHR 130 (269)
T ss_pred HHHHHHhCCCcCcceEEE-EEC---CCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 445778899999999887 442 23456777776 6889999996655568999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||++.......... .+
T Consensus 131 dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~------------------------------~~--------------- 165 (269)
T cd05065 131 DLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP------------------------------TY--------------- 165 (269)
T ss_pred ccChheEEEcCCCcEEECCCccccccccCcccc------------------------------cc---------------
Confidence 999999999999999999999874321110000 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
. .......+..|+|||.+.+..++.++|||||||++|||+
T Consensus 166 -------------------------------------~---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l 205 (269)
T cd05065 166 -------------------------------------T---SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 205 (269)
T ss_pred -------------------------------------c---cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHh
Confidence 0 000011245799999998888999999999999999987
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+......+......+...+++.+||..+|.+||++.+++.
T Consensus 206 ~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 206 SYGERPYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred cCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5 55443322 223333222222222223344558999999999999999999976
No 361
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.92 E-value=2.9e-25 Score=229.28 Aligned_cols=201 Identities=14% Similarity=0.151 Sum_probs=148.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+..+++.++|+|++++++ ++. ....+++++++ .+++|.+++.. .+..+++.+++.++.||+.||.|||++||+
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~ 125 (261)
T cd05034 50 QEAQIMKKLRHDKLVQLYA-VCS---EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYI 125 (261)
T ss_pred HHHHHHhhCCCCCEeeeee-eee---cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3445688899999999887 432 22346777776 68999999954 335689999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++++|||.+...+.....
T Consensus 126 h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------- 159 (261)
T cd05034 126 HRDLAARNILVGENLVCKIADFGLARLIEDDEYT---------------------------------------------- 159 (261)
T ss_pred cCCcchheEEEcCCCCEEECccccceeccchhhh----------------------------------------------
Confidence 9999999999999999999999987433211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 160 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 196 (261)
T cd05034 160 -------------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTE 196 (261)
T ss_pred -------------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHH
Confidence 0000123567999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+......+..........+++.+||..+|.+||++.++++
T Consensus 197 l~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 197 IVTYGRVPYPGMTN-REVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 997 5543332 2333333333222222223345569999999999999999999875
No 362
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.92 E-value=1.3e-25 Score=233.89 Aligned_cols=220 Identities=19% Similarity=0.220 Sum_probs=154.1
Q ss_pred ceeeccCC-CCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 29 GVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 29 ~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
..++..+. |+||+++++ ++. ....+++++++. +++|.+++.+.. .+++..++.|+.||+.||.|||+.|++|+
T Consensus 52 ~~~~~~l~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~ 126 (280)
T cd05581 52 KEVLTRLNGHPGIIKLYY-TFQ---DEENLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGIIHR 126 (280)
T ss_pred HHHHHhcccCCCchhHHH-Hhc---CCceEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 34566777 999999877 442 234567777775 999999996554 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++.++.++++|||.+...+......... .+. +
T Consensus 127 dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~--------------------------~~~--------------~ 166 (280)
T cd05581 127 DLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNK--------------------------GDA--------------T 166 (280)
T ss_pred CCCHHHeEECCCCCEEecCCccccccCCccccccCC--------------------------CCC--------------c
Confidence 999999999999999999999886543321110000 000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
...... ...........++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 167 ---------~~~~~~---------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~ 216 (280)
T cd05581 167 ---------NIDSQI---------------------EKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQML 216 (280)
T ss_pred ---------cccccc---------------------cccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHH
Confidence 000000 00000011246788999999998888999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCC
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFL 325 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~ 325 (712)
+ ||...... ........... .......+...+|+.+||..+|.+|||+ .++++||||
T Consensus 217 ~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 217 TGKPPFRGSNEY-LTFQKILKLEY-SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred hCCCCCCCccHH-HHHHHHHhcCC-CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 9 44433322 22222221111 1111123455699999999999999999 999999997
No 363
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.92 E-value=3.2e-25 Score=231.59 Aligned_cols=203 Identities=18% Similarity=0.180 Sum_probs=148.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-------CCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-------~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+++.++|+|++++++ ++... ....++++++ .+++|.+++.... ..+++.+++.++.||+.||+||
T Consensus 57 ~e~~~l~~l~h~ni~~~~~-~~~~~--~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L 133 (280)
T cd05043 57 QESCLLYGLSHQNILPILH-VCIED--GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYL 133 (280)
T ss_pred HHHHHHHhCCCCCCCeEEE-EEecC--CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 3445678889999999887 43222 2345566665 6899999984321 4589999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++|++|+||||+||+++.++.+|++|||+++.+...... .
T Consensus 134 H~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~----------------------------------~----- 174 (280)
T cd05043 134 HKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH----------------------------------C----- 174 (280)
T ss_pred HHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE----------------------------------E-----
Confidence 9999999999999999999999999999988543211000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
......++..|+|||.+.+..++.++|||||
T Consensus 175 -------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~sl 205 (280)
T cd05043 175 -------------------------------------------------LGDNENRPVKWMALESLVNKEYSSASDVWSF 205 (280)
T ss_pred -------------------------------------------------eCCCCCcchhccCHHHHhcCCCCchhhHHHh
Confidence 0000234667999999988889999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||++||+++ ||..... ......+.....+.......+...+++.+||..+|++|||+.++++
T Consensus 206 G~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 206 GVLLWELMTLGQTPYVEIDP-FEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHHHHHHhcCCCCCcCcCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999999996 5543322 2233333333222222222345569999999999999999999986
No 364
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.92 E-value=3.2e-25 Score=230.15 Aligned_cols=201 Identities=15% Similarity=0.182 Sum_probs=140.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----CCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
+...++.++|+||+++++ .+. ....+++++|+ .+++|.++|.... ...++..++.++.||+.||+|||++|
T Consensus 45 e~~~~~~l~h~nii~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 45 EVQPYRELNHPNVLQCLG-QCI---ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred HHHHHHhCCCCCcceEEE-EEC---CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 445677899999999887 442 23457777777 5899999994432 22467788999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.+|++|||++........ +
T Consensus 121 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------~----------- 156 (269)
T cd05042 121 FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY---------------------------------Y----------- 156 (269)
T ss_pred EecccccHhheEecCCCcEEEeccccccccccchh---------------------------------e-----------
Confidence 99999999999999999999999998743211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-------CCCCCccch
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDI 255 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDI 255 (712)
.......++..|+|||++.. ..++.++||
T Consensus 157 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di 192 (269)
T cd05042 157 --------------------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNI 192 (269)
T ss_pred --------------------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhHH
Confidence 00000235677999998743 347889999
Q ss_pred HHHHHHHHHhhC----CCCCChhhHHHHHhhcccC---CCchhhhcCch-hHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 256 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 256 wSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||++|||++ ||............+.... ..+......+. ...++..|+ .||.+|||+++|++
T Consensus 193 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 193 WSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 999999999997 4544433322222222221 11222223333 347888888 59999999999876
No 365
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.92 E-value=3.9e-25 Score=233.15 Aligned_cols=201 Identities=16% Similarity=0.169 Sum_probs=143.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC----------CCCChhHHHHHHHHHHHHHH
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~----------~~l~~~~~~~i~~qil~~l~ 96 (712)
+..++..++|+||+++++ ++.. ...+++++|+ .+++|.+++.... ..+++.++..++.||+.||+
T Consensus 69 E~~~l~~l~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~ 144 (296)
T cd05095 69 EIKIMSRLKDPNIIRLLA-VCIT---SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMK 144 (296)
T ss_pred HHHHHHhCCCCCcceEEE-EEec---CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHH
Confidence 445688899999999888 4422 2346777776 5899999984321 23677889999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||++||+|+||||+||+++.++.++++|||++........ +
T Consensus 145 ~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------~----- 186 (296)
T cd05095 145 YLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDY---------------------------------Y----- 186 (296)
T ss_pred HHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcc---------------------------------e-----
Confidence 99999999999999999999999999999998743211100 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
. ......++..|++||...++.++.++|||
T Consensus 187 ---------~-----------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 187 ---------R-----------------------------------------IQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred ---------e-----------------------------------------ccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 0 00002346779999998888899999999
Q ss_pred HHHHHHHHhhC-----CCCCChhhHHHHHhh-------cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC-----PFSTGEEKTRTMSSL-------RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~-----pf~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ||....... .+... ......+......+...+|+.+||+.+|.+||++.+|++
T Consensus 217 SlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQLSDEQ-VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHHhCCCCCccccChHH-HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999986 454332221 11111 111111111222345569999999999999999999875
No 366
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.92 E-value=4.4e-25 Score=229.82 Aligned_cols=201 Identities=18% Similarity=0.215 Sum_probs=147.2
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC--------CCCChhHHHHHHHHHHHHHHHh
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~--------~~l~~~~~~~i~~qil~~l~~l 98 (712)
+..+|+.+.|+|++++++ ++.+ ....++++|+ .+++|.+++.... ..+++..++.++.||+.||.||
T Consensus 58 E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L 133 (275)
T cd05046 58 ELDMFRKLSHKNVVRLLG-LCRE---AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL 133 (275)
T ss_pred HHHHHHhcCCcceeeeEE-EECC---CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 445788899999999887 4422 2345677776 5899999994332 1489999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+||||||+||+++..+.++++|||++.........
T Consensus 134 H~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~---------------------------------------- 173 (275)
T cd05046 134 SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY---------------------------------------- 173 (275)
T ss_pred hhcCcccCcCccceEEEeCCCcEEEcccccccccCccccc----------------------------------------
Confidence 9999999999999999999999999999877322110000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
......++..|+|||.+.+..++.++|||||
T Consensus 174 -------------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~sl 204 (275)
T cd05046 174 -------------------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSF 204 (275)
T ss_pred -------------------------------------------------ccCCceeEEeecChhhhccCCCCchhhHHHH
Confidence 0000234667999999988889999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||++|+|++ ||...... ...........+....... ....+++.+||+.+|.+|||+.+++..
T Consensus 205 G~~l~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 205 GVLMWEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHHHHHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 999999997 55433222 2333333222221112223 344599999999999999999999863
No 367
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92 E-value=6.6e-25 Score=255.40 Aligned_cols=100 Identities=10% Similarity=0.099 Sum_probs=84.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++||||+.+++ ++. ....+|++||| .|++|.+++...+ .+++..++.|+.||+.||+|||++||||
T Consensus 53 ~E~~~l~~l~hp~Iv~~~~-~~~---~~~~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiH 127 (669)
T cd05610 53 AERDALALSKSPFIVHLYY-SLQ---SANNVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHGIIH 127 (669)
T ss_pred HHHHHHHhcCCCCcCeEEE-EEE---ECCEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 3444677889999999876 432 23467788887 5999999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccC
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSD 131 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~ 131 (712)
|||||+||||+.++.++|+|||+++.
T Consensus 128 rDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 128 RDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred CCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 99999999999999999999999874
No 368
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.92 E-value=6.6e-25 Score=227.90 Aligned_cols=199 Identities=17% Similarity=0.182 Sum_probs=139.6
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+++.++|||++++++ .+.. ...+++++|+ .+++|.+++.+. ...+++..++.++.||+.||+|||++||+|
T Consensus 47 ~~~~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H 122 (268)
T cd05086 47 DPYRILQHPNILQCLG-QCVE---AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLH 122 (268)
T ss_pred HHHhccCCcchhheEE-EecC---CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4567789999999888 4432 2456777777 589999999542 234677788899999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++...... ++
T Consensus 123 ~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------~~-------------- 154 (268)
T cd05086 123 SDLALRNCFLTSDLTVKVGDYGIGPSRYKE----------------------------------DY-------------- 154 (268)
T ss_pred cCCccceEEEcCCccEEecccccccccCcc----------------------------------hh--------------
Confidence 999999999999999999999986321000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-------CCCCCccchHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDIYRL 258 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDIwSl 258 (712)
........++..|+|||++.. ..++.++|||||
T Consensus 155 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl 194 (268)
T cd05086 155 ----------------------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWAL 194 (268)
T ss_pred ----------------------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHH
Confidence 000001356888999998743 235789999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccC---CCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRV---LPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||++|||++ ||............+.... ..+.... ..+...+++..|+ .+|.+||++.+|++
T Consensus 195 G~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 195 GVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 999999986 5544333222222222211 1122222 2334458899999 67999999999975
No 369
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.92 E-value=4.6e-25 Score=231.74 Aligned_cols=207 Identities=17% Similarity=0.208 Sum_probs=150.7
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|..+ +|+||+.+++ .+.. ...+++++|+ .+++|.+++.... .+++..+..++.||+.||.|||++|++|
T Consensus 54 e~~~l~~l~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~i~H 128 (290)
T cd05613 54 ERQVLEHIRQSPFLVTLHY-AFQT---DTKLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKLGIIY 128 (290)
T ss_pred HHHHHHhcccCCChhceee-Eeec---CCeEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 44566777 6899999776 4432 2356677777 6899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||+|+||+++.++.++++|||++.........
T Consensus 129 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 161 (290)
T cd05613 129 RDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE----------------------------------------------- 161 (290)
T ss_pred cCCCHHHeEECCCCCEEEeeCccceeccccccc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvll~ 263 (712)
......|+..|+|||.+.+. .++.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~ 199 (290)
T cd05613 162 ------------------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMY 199 (290)
T ss_pred ------------------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHH
Confidence 00013578899999998753 3788999999999999
Q ss_pred HhhC---CCCCCh---hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+|++ ||.... ........+.... ++......+...+++.+||..+|.+|| ++.+++.||||....
T Consensus 200 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 200 ELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHhcCCCCCCcCCccccHHHHHHHhhccC-CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 9999 443211 1111122221111 121122234456999999999999997 899999999998865
No 370
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.92 E-value=6.8e-25 Score=226.61 Aligned_cols=199 Identities=13% Similarity=0.140 Sum_probs=147.5
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+++.++|+|++++++ .+.. ..+++++++ .+++|.+++.+ ....+++..++.++.||+.||.|||+.|++|
T Consensus 51 e~~~l~~l~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H 125 (260)
T cd05073 51 EANVMKTLQHDKLVKLHA-VVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 125 (260)
T ss_pred HHHHHHhcCCCCcceEEE-EEcC----CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 445788999999999877 3322 346677776 58899999954 3445788899999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++..+.++++|||.+.........
T Consensus 126 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------- 158 (260)
T cd05073 126 RDLRAANILVSASLVCKIADFGLARVIEDNEYT----------------------------------------------- 158 (260)
T ss_pred cccCcceEEEcCCCcEEECCCcceeeccCCCcc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 159 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l 196 (260)
T cd05073 159 ------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 196 (260)
T ss_pred ------------------------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHH
Confidence 00002345679999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.... .......+......+..........+++.+||..+|++||++.+++.
T Consensus 197 ~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 197 VTYGRIPYPGMS-NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HhcCCCCCCCCC-HHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 97 554332 22333333333322222223345559999999999999999998865
No 371
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.92 E-value=4.6e-25 Score=255.60 Aligned_cols=217 Identities=19% Similarity=0.282 Sum_probs=145.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC----------CCCCChhHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------KRSVDVYECLHIFRQIVEIV 95 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~----------~~~l~~~~~~~i~~qil~~l 95 (712)
++..+++.++||||+.+++ ++.+ .+..+++|++ .|++|.+++... ...++...++.++.||+.||
T Consensus 51 rEi~ILs~L~HPNIVkl~~-v~~d---~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL 126 (932)
T PRK13184 51 REAKIAADLIHPGIVPVYS-ICSD---GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATI 126 (932)
T ss_pred HHHHHHHhCCCcCcCeEEE-EEee---CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHH
Confidence 4566788999999999887 4432 2456667766 699999988421 12345677899999999999
Q ss_pred HHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 96 ~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
+|||++||+||||||+||+++.++.++++|||++.......-... ..++..
T Consensus 127 ~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~---------------------------~l~~~~-- 177 (932)
T PRK13184 127 EYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLL---------------------------DIDVDE-- 177 (932)
T ss_pred HHHHHCCccccCCchheEEEcCCCCEEEEecCcceeccccccccc---------------------------cccccc--
Confidence 999999999999999999999999999999999865421100000 000000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccch
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (712)
...+ . .........+||+.|+|||.+.+..++.++||
T Consensus 178 -------~~s~-------~-----------------------------s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDI 214 (932)
T PRK13184 178 -------RNIC-------Y-----------------------------SSMTIPGKIVGTPDYMAPERLLGVPASESTDI 214 (932)
T ss_pred -------cccc-------c-----------------------------cccccCCCCCCCCCCCCHHHhcCCCCCcHhHH
Confidence 0000 0 00000011479999999999999999999999
Q ss_pred HHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCch---hhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 256 wSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||++|||++ ||............ ....|.. .....+...+++.+||..||++||+..+.+.
T Consensus 215 WSLGVILyELLTG~~PF~~~~~~ki~~~~--~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 215 YALGVILYQMLTLSFPYRRKKGRKISYRD--VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhhhhhhh--hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999 55443222111111 1111111 1122344558999999999999987655443
No 372
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92 E-value=8.9e-25 Score=227.17 Aligned_cols=205 Identities=14% Similarity=0.092 Sum_probs=145.9
Q ss_pred ccceeeccCCCCCccccccccccccccc---CceEEEEee-CCccHHHhhcC-----CCCCCChhHHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 97 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~---~~~~l~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qil~~l~~ 97 (712)
++..+++.++|||++++++ ++...... ...++++++ .+++|.+++.. ....++...++.++.||+.||+|
T Consensus 50 ~E~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~ 128 (273)
T cd05074 50 REAACMKEFDHPNVIKLIG-VSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEY 128 (273)
T ss_pred HHHHHHhcCCCCCcceEEE-EEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3455788999999999887 43322222 123455555 68999888721 12247889999999999999999
Q ss_pred hhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 98 lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||+.||+||||||+||+++.++.++++|||+++........ .
T Consensus 129 lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------ 170 (273)
T cd05074 129 LSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYY--------------------------------R------ 170 (273)
T ss_pred HHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcce--------------------------------e------
Confidence 99999999999999999999999999999987543211000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
......+++.|++||.+.+..++.++||||
T Consensus 171 --------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~s 200 (273)
T cd05074 171 --------------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWA 200 (273)
T ss_pred --------------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHH
Confidence 000022456799999998888999999999
Q ss_pred HHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 258 lGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++|+|++ ||... ........+.............+...+++.+||..+|.+||++.++++
T Consensus 201 lG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 201 FGVTMWEIMTRGQTPYAGV-ENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHHHHhhCCCCCCCCC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999987 34332 222333333332222222233456669999999999999999999986
No 373
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.92 E-value=8.6e-25 Score=227.06 Aligned_cols=202 Identities=14% Similarity=0.182 Sum_probs=141.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC----CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~----~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+++.++||||+++++ .+.+ ...+++++|+ .+++|.++|... ....++..++.++.||+.||+|||+.
T Consensus 44 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 44 EEAQPYRSLQHSNLLQCLG-QCTE---VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcC---CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 3556788999999999887 4432 2346677777 689999999432 12356778889999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+|+||||+||+++.++.++++|||.+....... +
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~----------------------------------~---------- 155 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED----------------------------------Y---------- 155 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCccccccccCcc----------------------------------e----------
Confidence 99999999999999999999999999874321110 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-------CCCCccc
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSCASD 254 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~~~~sD 254 (712)
........|+..|+|||++.+. .++.++|
T Consensus 156 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~D 191 (269)
T cd05087 156 --------------------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESN 191 (269)
T ss_pred --------------------------------------------eecCCCcCCcccccCHhHhccccccccccCCCccch
Confidence 0000013467889999998542 3578999
Q ss_pred hHHHHHHHHHhhC----CCCCChhhHHHHHhhccc---CCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 255 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHR---VLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 255 IwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||||++|||++ ||................ ...+... ...+...+++..|+ .+|.+|||+++|+.
T Consensus 192 iwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 192 VWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 9999999999985 665443332222212111 1111111 22334458999998 68999999999975
No 374
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.92 E-value=7.4e-25 Score=228.96 Aligned_cols=205 Identities=20% Similarity=0.207 Sum_probs=146.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...++.+.|+|++++++ ++.. .....+++++|+ .+++|.+++......+++..++.++.||+.||.|||+.||+|+
T Consensus 56 ei~~l~~l~~~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~ 133 (284)
T cd05038 56 EIEILRTLDHENIVKYKG-VCEK-PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHR 133 (284)
T ss_pred HHHHHHhCCCCChheEEe-eeec-CCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 344688899999999877 4432 234456677776 5899999996555468999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.++++|||.+....... ++
T Consensus 134 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~--------------- 165 (284)
T cd05038 134 DLAARNILVESEDLVKISDFGLAKVLPEDK---------------------------------DY--------------- 165 (284)
T ss_pred CCCHHhEEEcCCCCEEEcccccccccccCC---------------------------------cc---------------
Confidence 999999999999999999999885432110 00
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.. ......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 166 -------------------~~--------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~ 206 (284)
T cd05038 166 -------------------YY--------------------VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELF 206 (284)
T ss_pred -------------------ee--------------------ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheee
Confidence 00 000012356799999998888999999999999999999
Q ss_pred C---CCCCChhhH-------------HHHH-hhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C---PFSTGEEKT-------------RTMS-SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~---pf~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ |+....... ..+. .+......+..........+++.+||..+|.+|||+.++++
T Consensus 207 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 207 TYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred ccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9 333211111 1111 11111111111122234559999999999999999999986
No 375
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.9e-24 Score=224.87 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=74.2
Q ss_pred CCCCCcccccccccccccccCceEEEEeeCCccHHHhh-cCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCCCc
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSC 112 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~N 112 (712)
.+-+.||+|++.|-....+..|+|+|+|+.|.+|..|| +...+.++...++.|++||+.||+|||. .||||-||||+|
T Consensus 139 ~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPEN 218 (590)
T KOG1290|consen 139 PGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPEN 218 (590)
T ss_pred CCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcce
Confidence 44456899999777788899999999999999999999 4455669999999999999999999998 599999999999
Q ss_pred eeecCC
Q 005147 113 FVMSSF 118 (712)
Q Consensus 113 Ill~~~ 118 (712)
||+...
T Consensus 219 vLl~~~ 224 (590)
T KOG1290|consen 219 VLLCST 224 (590)
T ss_pred eeeecc
Confidence 999644
No 376
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=2.8e-25 Score=236.14 Aligned_cols=248 Identities=14% Similarity=0.161 Sum_probs=162.0
Q ss_pred eeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 24 r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++||| ||+.-+.+=||+||+ .|.+ .+.+|.||+| .||++-.+|.+-+ .|.+..++.++..|.+|+++.|..|
T Consensus 677 KAERD--ILAEADn~WVVrLyy-SFQD---kdnLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmG 749 (1034)
T KOG0608|consen 677 KAERD--ILAEADNEWVVRLYY-SFQD---KDNLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMG 749 (1034)
T ss_pred hhhhh--hHhhcCCcceEEEEE-Eecc---CCceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45566 899999999999988 4432 3456666666 8999999885544 3899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+|||||||+||||+.+|+|||.|||+|.-+-.. ++...++ .+|- .++
T Consensus 750 FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT---------------------HdskYYq----~gdH--------~Rq 796 (1034)
T KOG0608|consen 750 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT---------------------HDSKYYQ----EGDH--------HRQ 796 (1034)
T ss_pred ceecccCccceEEccCCceeeeeccccccceec---------------------ccccccc----CCCc--------ccc
Confidence 999999999999999999999999999653211 0100000 0000 000
Q ss_pred ccccccCCCcccccccccccccccccccccccccccccc--CCCCcccccccccCccccCcccccCCCCCCccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (712)
.+ +...+ .+.|.+-.....+.+ ++...+..-.++||+.|+|||++....|+..+|+||.||
T Consensus 797 DS------------mep~~-----e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gv 859 (1034)
T KOG0608|consen 797 DS------------MEPSP-----EWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGV 859 (1034)
T ss_pred cc------------CCCch-----hhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhH
Confidence 00 00000 111111111111111 122233344589999999999999999999999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhccc---CCCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~~~ 330 (712)
+||||+. ||.........+..+.=. .++. -....+++.++|.++. .++..|. .+++|..||||+....
T Consensus 860 il~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~-~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 860 ILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPY-QGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred HHHHHhhCCCCccCCCCCcceeeeeehhhcccccc-ccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence 9999998 776544333222221111 1111 1123345557777644 5667776 4778999999998643
No 377
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.2e-25 Score=218.49 Aligned_cols=209 Identities=16% Similarity=0.217 Sum_probs=156.5
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~ 111 (712)
-+..+||-+|++.. .+ ..+...|++++++.||+|--.+ +.+++++++.++.+...|..||.|||++|||.||||.+
T Consensus 305 e~asn~pflvglhs-cf--qtesrlffvieyv~ggdlmfhm-qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkld 380 (593)
T KOG0695|consen 305 EQASNNPFLVGLHS-CF--QTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLD 380 (593)
T ss_pred HhccCCCeEEehhh-hh--cccceEEEEEEEecCcceeeeh-hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeecccc
Confidence 34478999888766 44 3344566777777999998777 44566999999999999999999999999999999999
Q ss_pred ceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
|+|++..|++|+.|+|+|+.-- +.+|.
T Consensus 381 nvlldaeghikltdygmcke~l---------------------------------~~gd~-------------------- 407 (593)
T KOG0695|consen 381 NVLLDAEGHIKLTDYGMCKEGL---------------------------------GPGDT-------------------- 407 (593)
T ss_pred ceEEccCCceeecccchhhcCC---------------------------------CCCcc--------------------
Confidence 9999999999999999995310 01121
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---C
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---p 268 (712)
....+|||.|.|||+++|..|++++|+|+|||++|||+. |
T Consensus 408 -------------------------------------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrsp 450 (593)
T KOG0695|consen 408 -------------------------------------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP 450 (593)
T ss_pred -------------------------------------cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCC
Confidence 012689999999999999999999999999999999998 6
Q ss_pred CCC------ChhhHH-HHHhhc-ccCCCchhhhcCchhHHHHHHcCCCCCCCCC------CHHHHhcCcCCCCCcCchHH
Q 005147 269 FST------GEEKTR-TMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP------KMGELLQSEFLNEPRDSMEE 334 (712)
Q Consensus 269 f~~------~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp------t~~eiL~hp~~~~~~~~~~e 334 (712)
|.- ..+... .++.+. +++..|. ........+++..|.+||.+|. .+.++..|+||+.....+.+
T Consensus 451 fdivgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~le 528 (593)
T KOG0695|consen 451 FDIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLE 528 (593)
T ss_pred cceecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHh
Confidence 641 122222 222222 2222221 2234455789999999999986 47889999999976655544
Q ss_pred HH
Q 005147 335 RE 336 (712)
Q Consensus 335 ~~ 336 (712)
.+
T Consensus 529 qk 530 (593)
T KOG0695|consen 529 QK 530 (593)
T ss_pred hc
Confidence 43
No 378
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.92 E-value=9.3e-25 Score=239.26 Aligned_cols=155 Identities=13% Similarity=0.149 Sum_probs=115.7
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCch
Q 005147 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (712)
Q Consensus 79 l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (712)
+++..++.|+.||+.||+|||+.||+||||||+||+++..+.++++|||+++......
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~---------------------- 293 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDS---------------------- 293 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccc----------------------
Confidence 5667788999999999999999999999999999999999999999999885321110
Q ss_pred hHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccc
Q 005147 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (712)
Q Consensus 159 ~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (712)
.+ .......++..|
T Consensus 294 -----------~~-------------------------------------------------------~~~~~~~~~~~y 307 (401)
T cd05107 294 -----------NY-------------------------------------------------------ISKGSTFLPLKW 307 (401)
T ss_pred -----------cc-------------------------------------------------------ccCCCcCCCCce
Confidence 00 000013457889
Q ss_pred cCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC
Q 005147 239 ASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 239 ~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
+|||.+.+..++.++|||||||++|||++ ||............+.....++..........+++.+||..+|.+||
T Consensus 308 ~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RP 387 (401)
T cd05107 308 MAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRP 387 (401)
T ss_pred eChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCc
Confidence 99999988889999999999999999996 55433322223333333322222222345566999999999999999
Q ss_pred CHHHHhc
Q 005147 315 KMGELLQ 321 (712)
Q Consensus 315 t~~eiL~ 321 (712)
++.+|++
T Consensus 388 s~~ell~ 394 (401)
T cd05107 388 DFSQLVH 394 (401)
T ss_pred CHHHHHH
Confidence 9999987
No 379
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.92 E-value=1.6e-24 Score=224.82 Aligned_cols=193 Identities=16% Similarity=0.238 Sum_probs=144.8
Q ss_pred ccCCCCCcccccccccccccccCceEEEEee-CCccHHHhh---cCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceecc
Q 005147 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHN 107 (712)
Q Consensus 33 ~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l---~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrD 107 (712)
+.++|||++.+++ .+.. ...+++++|+ .|++|.+++ ......+++..++.++.||+.+|.|||+ .||+|+|
T Consensus 64 ~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~d 139 (269)
T cd08528 64 EQLRHPNIVRYYK-TFLE---NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRD 139 (269)
T ss_pred hcCCCCCeeeEEe-eEcc---CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecC
Confidence 4589999999888 4422 2456777766 688999887 2334458999999999999999999996 7899999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+|+||+++.++.++++|||.+.......
T Consensus 140 l~~~nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------------------- 168 (269)
T cd08528 140 LTPNNIMLGEDDKVTITDFGLAKQKQPES--------------------------------------------------- 168 (269)
T ss_pred CCHHHEEECCCCcEEEecccceeeccccc---------------------------------------------------
Confidence 99999999999999999999884321110
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 169 ----------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~ 208 (269)
T cd08528 169 ----------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT 208 (269)
T ss_pred ----------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence 0001356888999999998889999999999999999998
Q ss_pred ---CCCCChhhHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 ---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||...... .....+.....++... ...+...+++.+||+.||.+||++.|+..
T Consensus 209 g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 209 LQPPFYSTNML-SLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred CCCcccccCHH-HHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 55433322 2222333333332222 22345669999999999999999999865
No 380
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91 E-value=1.5e-24 Score=227.66 Aligned_cols=208 Identities=18% Similarity=0.191 Sum_probs=150.1
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..+ +|||++.+++ .+. ....+++++++ .|++|.+++.... .+++.+++.++.|++.+|+|||+.|++|
T Consensus 54 E~~~l~~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~~~H 128 (288)
T cd05583 54 ERQVLEAVRRCPFLVTLHY-AFQ---TDTKLHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQLGIIY 128 (288)
T ss_pred HHHHHHhccCCcchhhhhe-eee---cCCEEEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 33456666 7999999877 332 22356777777 5889999985443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||+++....... .
T Consensus 129 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~-------------- 161 (288)
T cd05583 129 RDIKLENILLDSEGHVVLTDFGLSKEFLAEEE---------------------------------E-------------- 161 (288)
T ss_pred cCCCHHHeEECCCCCEEEEECccccccccccc---------------------------------c--------------
Confidence 99999999999999999999998743211100 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvll~ 263 (712)
......|+..|+|||.+.+.. ++.++||||||+++|
T Consensus 162 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~ 199 (288)
T cd05583 162 ------------------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTF 199 (288)
T ss_pred ------------------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHH
Confidence 000135788999999987665 788999999999999
Q ss_pred HhhC---CCCCChh---hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC---HHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~eiL~hp~~~~~~~ 330 (712)
+|++ ||..... ............ ++......+...+++.+||+.+|++||| +.++|+||||+....
T Consensus 200 el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 200 ELLTGASPFTVDGEQNSQSEISRRILKSK-PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred HHHhCCCCcccCcccchHHHHHHHHHccC-CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 9999 5532211 111111111111 1111222345569999999999999998 567899999987644
No 381
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.91 E-value=2.1e-24 Score=219.32 Aligned_cols=188 Identities=17% Similarity=0.220 Sum_probs=162.3
Q ss_pred CCCCCcccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEE-cCCcEEEEEccC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLS-FSKLRVKADLNQ 561 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~dl~~ 561 (712)
-+|-.-|..++|.|+|+.++..+.+.+ ....+..+||+..|+++.| ..||.+..+. .|..-.+||+++
T Consensus 258 ~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf---~~DGSL~~tGGlD~~~RvWDlRt 334 (459)
T KOG0272|consen 258 EGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAF---QPDGSLAATGGLDSLGRVWDLRT 334 (459)
T ss_pred hcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEe---cCCCceeeccCccchhheeeccc
Confidence 355555677999999999866655432 3455778899999999999 6777766654 555666799999
Q ss_pred Ccee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
|+++ +|...|.+|+|+|.|..+||||.|+++||||++.. .......+|.+-|+.|+|.|..+.+|+|++
T Consensus 335 gr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r-------~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tas 407 (459)
T KOG0272|consen 335 GRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR-------SELYTIPAHSNLVSQVKYSPQEGYFLVTAS 407 (459)
T ss_pred CcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccc-------ccceecccccchhhheEecccCCeEEEEcc
Confidence 9865 79999999999999999999999999999999762 123456789999999999998899999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
+|++++||..++.++++++.||++.|.|++.+| +++.++|+|.|.++|+|.
T Consensus 408 yD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~-d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 408 YDNTVKIWSTRTWSPLKSLAGHEGKVISLDISP-DSQAIATSSFDRTIKLWR 458 (459)
T ss_pred cCcceeeecCCCcccchhhcCCccceEEEEecc-CCceEEEeccCceeeecc
Confidence 999999999999999999999999999999997 999999999999999995
No 382
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.91 E-value=1.4e-24 Score=220.27 Aligned_cols=203 Identities=23% Similarity=0.287 Sum_probs=154.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+...++.++|+|++.+++ .+.. ....++++++ .+++|.+++..... ++...+..++.+++.++.|||+.||+|
T Consensus 36 ~e~~~~~~l~~~~i~~~~~-~~~~---~~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h 110 (244)
T smart00220 36 REISILKKLKHPNIVRLYD-VFED---EDKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGIIH 110 (244)
T ss_pred HHHHHHHhCCCCcHHHHHh-heee---CCEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCeec
Confidence 3334677789999999887 3322 2456677777 56699999955433 899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||+|+||+++.++.++++|||.+.......
T Consensus 111 ~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------------------------------------------------- 141 (244)
T smart00220 111 RDLKPENILLDEDGHVKLADFGLARQLDPGG------------------------------------------------- 141 (244)
T ss_pred CCcCHHHeEECCCCcEEEccccceeeecccc-------------------------------------------------
Confidence 9999999999999999999999874322110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|++||.+.+..++.++|||+||+++|+|
T Consensus 142 ------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l 179 (244)
T smart00220 142 ------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYEL 179 (244)
T ss_pred ------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHH
Confidence 00013568889999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhh--cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||............+.....+..... ......+++.+||..+|++||++.++++||||
T Consensus 180 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 180 LTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 98 56543333344444443333322211 23455699999999999999999999999997
No 383
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=5e-25 Score=229.96 Aligned_cols=183 Identities=17% Similarity=0.270 Sum_probs=139.2
Q ss_pred ccCceEEEEeeCCccHHHhhcCCCCC--CChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCC-CcEEEEecccc
Q 005147 53 AIDPFVHAIEWGDVSLRQWLDKPKRS--VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASC 129 (712)
Q Consensus 53 ~~~~~~l~~e~~g~sL~~~l~~~~~~--l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~-~~vkl~dfg~~ 129 (712)
.-.|+|+|+|....+|++.|++.++. |....++.|+.||+.||..|-..||+|.||||+|||++.. +.+||||||.+
T Consensus 505 hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 505 HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccc
Confidence 44599999999999999999776553 6788999999999999999999999999999999999954 66899999998
Q ss_pred cCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccccccc
Q 005147 130 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 209 (712)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (712)
...+..++.
T Consensus 585 ~~~~eneit----------------------------------------------------------------------- 593 (752)
T KOG0670|consen 585 SFASENEIT----------------------------------------------------------------------- 593 (752)
T ss_pred ccccccccc-----------------------------------------------------------------------
Confidence 554333111
Q ss_pred ccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChhh--HHHHHhhcc
Q 005147 210 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEK--TRTMSSLRH 284 (712)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~--~~~~~~~~~ 284 (712)
.++-+..|.|||++.|.+|++..|+||+||+||||+| -|++..+. ...+..+..
T Consensus 594 ---------------------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG 652 (752)
T KOG0670|consen 594 ---------------------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG 652 (752)
T ss_pred ---------------------HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence 1455778999999999999999999999999999999 34433221 112221110
Q ss_pred ---------cC--------------------------------CC---------------chhhhcCchhHHHHHHcCCC
Q 005147 285 ---------RV--------------------------------LP---------------PQLLLKFPKEASFCLWLLHP 308 (712)
Q Consensus 285 ---------~~--------------------------------~~---------------~~~~~~~~~~~~li~~~L~~ 308 (712)
+. -| ..-........+|+.+||..
T Consensus 653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L 732 (752)
T KOG0670|consen 653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL 732 (752)
T ss_pred CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence 00 01 00001111223899999999
Q ss_pred CCCCCCCHHHHhcCcCCCC
Q 005147 309 EPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~ 327 (712)
||++|.|+.++|+||||+.
T Consensus 733 dP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 733 DPEKRITVNQALKHPFITE 751 (752)
T ss_pred ChhhcCCHHHHhcCCcccC
Confidence 9999999999999999985
No 384
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=1.5e-24 Score=210.30 Aligned_cols=158 Identities=18% Similarity=0.221 Sum_probs=121.2
Q ss_pred ccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCccccccccc
Q 005147 66 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 145 (712)
Q Consensus 66 ~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~ 145 (712)
|+|.+++...+..+++.+++.|++||+.||.|||++| ||+||+++.++.+++ ||.+...+..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999765666999999999999999999999999 999999999999998 8877322100
Q ss_pred ccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCC
Q 005147 146 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 225 (712)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 225 (712)
T Consensus 63 -------------------------------------------------------------------------------- 62 (176)
T smart00750 63 -------------------------------------------------------------------------------- 62 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCc-----hhhhcCc-
Q 005147 226 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-----QLLLKFP- 296 (712)
Q Consensus 226 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~~- 296 (712)
...|++.|||||++.+..++.++|||||||++|||++ ||............+.....+. ......+
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 0246899999999999999999999999999999998 5543332222222222211111 1111122
Q ss_pred --hhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 297 --KEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 297 --~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
...+++.+||..+|.+||++.++++|+|+.
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 466999999999999999999999999865
No 385
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3e-24 Score=218.44 Aligned_cols=201 Identities=19% Similarity=0.309 Sum_probs=152.0
Q ss_pred eccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
|+..+.|-.+.-++..+ ...+.+|.|||| .||+|--.|++-++ +.+..+..++..|+-||-+||++|||.||||.
T Consensus 403 LAL~~kppFL~qlHScF---QTmDRLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKL 478 (683)
T KOG0696|consen 403 LALPGKPPFLVQLHSCF---QTMDRLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKL 478 (683)
T ss_pred eecCCCCchHHHHHHHh---hhhhheeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeeeeccc
Confidence 44444444333333233 345567777777 69999888866554 99999999999999999999999999999999
Q ss_pred CceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCC
Q 005147 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (712)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~ 190 (712)
+|||++..|+|||+|||+++.--.+ +
T Consensus 479 DNvmLd~eGHiKi~DFGmcKEni~~----~-------------------------------------------------- 504 (683)
T KOG0696|consen 479 DNVMLDSEGHIKIADFGMCKENIFD----G-------------------------------------------------- 504 (683)
T ss_pred cceEeccCCceEeeecccccccccC----C--------------------------------------------------
Confidence 9999999999999999999531100 0
Q ss_pred CccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---
Q 005147 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (712)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~--- 267 (712)
.+....+|||-|+|||++...+|+.++|+||+||+||||+.
T Consensus 505 ------------------------------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQp 548 (683)
T KOG0696|consen 505 ------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP 548 (683)
T ss_pred ------------------------------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCC
Confidence 01112789999999999999999999999999999999998
Q ss_pred CCCCChhhHHHHHhhc-cc-CCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCcC
Q 005147 268 PFSTGEEKTRTMSSLR-HR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (712)
Q Consensus 268 pf~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~~ 330 (712)
||.+.++. .....+. +. .+|..+ +.++.+++..+|...|.+|.. -.+|-.||||+....
T Consensus 549 PFdGeDE~-elF~aI~ehnvsyPKsl---SkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW 614 (683)
T KOG0696|consen 549 PFDGEDED-ELFQAIMEHNVSYPKSL---SKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW 614 (683)
T ss_pred CCCCCCHH-HHHHHHHHccCcCcccc---cHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence 77766554 4444443 32 233322 234448999999999999974 467899999997754
No 386
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.91 E-value=1.3e-23 Score=210.58 Aligned_cols=171 Identities=18% Similarity=0.329 Sum_probs=145.5
Q ss_pred CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-------eecCCCCeeEEEEcCC-CCEEEEEe
Q 005147 516 RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-------LLNSSNLVCSLSFDRD-GELFAAAG 587 (712)
Q Consensus 516 ~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-------~~~h~~~V~~i~f~~~-~~~lat~~ 587 (712)
....|.+++.||.++||+++| +++..|.+...+.......|...+|. +.+|+..|.+++|+|. ...||+||
T Consensus 199 s~~~Pl~t~~ghk~EGy~LdW-Sp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS 277 (440)
T KOG0302|consen 199 SEFRPLFTFNGHKGEGYGLDW-SPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCS 277 (440)
T ss_pred cccCceEEecccCccceeeec-ccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeee
Confidence 446799999999999999999 88888865555555555557666654 5589999999999994 56999999
Q ss_pred CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC---CcEEEEeccCCCcEE
Q 005147 588 VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR---SQVLTEMREHERRVW 664 (712)
Q Consensus 588 ~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~---~~~~~~~~~H~~~v~ 664 (712)
.|++|+|||+|.... ...+...+|.+.|+.|+||-. -.+||+|+.||+++|||+|+ ++++.+|+.|..+|+
T Consensus 278 ~DgsIrIWDiRs~~~-----~~~~~~kAh~sDVNVISWnr~-~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pIt 351 (440)
T KOG0302|consen 278 CDGSIRIWDIRSGPK-----KAAVSTKAHNSDVNVISWNRR-EPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPIT 351 (440)
T ss_pred cCceEEEEEecCCCc-----cceeEeeccCCceeeEEccCC-cceeeecCCCceEEEEEhhhccCCCcceeEEeccCCee
Confidence 999999999987422 234556899999999999985 55999999999999999985 578999999999999
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 665 SIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 665 sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
||.|+|.+...|+.+|.|..|.|||+...
T Consensus 352 sieW~p~e~s~iaasg~D~QitiWDlsvE 380 (440)
T KOG0302|consen 352 SIEWHPHEDSVIAASGEDNQITIWDLSVE 380 (440)
T ss_pred EEEeccccCceEEeccCCCcEEEEEeecc
Confidence 99999999999999999999999998653
No 387
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.91 E-value=1.1e-23 Score=216.62 Aligned_cols=171 Identities=19% Similarity=0.337 Sum_probs=150.9
Q ss_pred CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-----------eecCCCCeeEEEEcC-CCCEEE
Q 005147 517 SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-----------LLNSSNLVCSLSFDR-DGELFA 584 (712)
Q Consensus 517 ~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-----------~~~h~~~V~~i~f~~-~~~~la 584 (712)
.+.|.++|+||.++|++++| +....|.+...+.+....+||+.... +.+|.+.|.+++|++ +..+|+
T Consensus 166 ~~~Pdl~L~gH~~eg~glsW-n~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~ 244 (422)
T KOG0264|consen 166 ECRPDLRLKGHEKEGYGLSW-NRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFG 244 (422)
T ss_pred cCCCceEEEeeccccccccc-ccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhhe
Confidence 57899999999999999999 88899988777777777779997532 236999999999999 667999
Q ss_pred EEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcE
Q 005147 585 AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRV 663 (712)
Q Consensus 585 t~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v 663 (712)
++|.|+++.|||+|+. .........+|.++|+|++|+|+++.+|||||.|++|.|||+|+. +++.++.+|.+.|
T Consensus 245 sv~dd~~L~iwD~R~~-----~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev 319 (422)
T KOG0264|consen 245 SVGDDGKLMIWDTRSN-----TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEV 319 (422)
T ss_pred eecCCCeEEEEEcCCC-----CCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcce
Confidence 9999999999999862 122344567899999999999999999999999999999999986 6899999999999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.+|.|+|....+|||++.|+++.|||+..-
T Consensus 320 ~~V~WSPh~etvLASSg~D~rl~vWDls~i 349 (422)
T KOG0264|consen 320 FQVEWSPHNETVLASSGTDRRLNVWDLSRI 349 (422)
T ss_pred EEEEeCCCCCceeEecccCCcEEEEecccc
Confidence 999999999999999999999999999753
No 388
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.91 E-value=6.8e-24 Score=231.04 Aligned_cols=167 Identities=19% Similarity=0.275 Sum_probs=144.5
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
-+|.||+++||+..| +| +.-..+.+..+..++ |.+.+..+. ||..+|+++.|+|-|-+|||||.|++.++|.
T Consensus 445 ~~L~GH~GPVyg~sF-sP--d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs 521 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSF-SP--DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWS 521 (707)
T ss_pred EEeecCCCceeeeee-cc--cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeee
Confidence 358899999999999 33 333334444444444 888876644 8999999999999999999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
... ........+|-+.|.|+.||| +.+|+||||.|.+|++||+.+|..++.|.||.++|.+|+||| +|.+|
T Consensus 522 ~d~-------~~PlRifaghlsDV~cv~FHP-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp-~Gr~L 592 (707)
T KOG0263|consen 522 TDH-------NKPLRIFAGHLSDVDCVSFHP-NSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSP-CGRYL 592 (707)
T ss_pred ccc-------CCchhhhcccccccceEEECC-cccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcC-CCceE
Confidence 864 233456778999999999999 699999999999999999999999999999999999999998 99999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEe
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|||+.|+.|++||+.++..+.++.
T Consensus 593 aSg~ed~~I~iWDl~~~~~v~~l~ 616 (707)
T KOG0263|consen 593 ASGDEDGLIKIWDLANGSLVKQLK 616 (707)
T ss_pred eecccCCcEEEEEcCCCcchhhhh
Confidence 999999999999999988886654
No 389
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.90 E-value=2e-24 Score=229.51 Aligned_cols=200 Identities=19% Similarity=0.181 Sum_probs=163.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++...+||||++++| +|. ..++.|+||+ .-|.|++||+.+...++......++.||+.||.|||+..+||
T Consensus 440 qEa~iMrnfdHphIikLIG-v~~----e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVH 514 (974)
T KOG4257|consen 440 QEASIMRNFDHPHIIKLIG-VCV----EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVH 514 (974)
T ss_pred HHHHHHHhCCCcchhheee-eee----ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhh
Confidence 5557899999999999998 763 3467777777 588999999777777999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|||+.+...||++|||+++-...+...
T Consensus 515 RDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY----------------------------------------------- 547 (974)
T KOG4257|consen 515 RDIAARNILVSSPQCVKLADFGLSRYLEDDAYY----------------------------------------------- 547 (974)
T ss_pred hhhhhhheeecCcceeeecccchhhhccccchh-----------------------------------------------
Confidence 999999999999999999999998654332110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.+ ....-..-|||||.++-..++.+||||-|||++||+
T Consensus 548 --------ka----------------------------------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEI 585 (974)
T KOG4257|consen 548 --------KA----------------------------------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEI 585 (974)
T ss_pred --------hc----------------------------------cccccceeecCccccchhcccchhhHHHHHHHHHHH
Confidence 00 000113458999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|. ||..-.+. .++-.+.++..+|..+...|....++.+||.++|.+||++.+|..
T Consensus 586 l~lGvkPfqgvkNs-DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 586 LSLGVKPFQGVKNS-DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHhcCCcccccccc-ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 97 88765543 445556667777777777788889999999999999999988754
No 390
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.90 E-value=5.4e-24 Score=235.42 Aligned_cols=208 Identities=16% Similarity=0.218 Sum_probs=157.1
Q ss_pred eeccCCCCCccccccccccc-ccccCceEEEEeeC-CccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 31 ELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWG-DVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~-~~~~~~~~l~~e~~-g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
+....+|||++.+|+.++.. ....+.+++|||+| |||..|++++ .+..+.+..+..|++.++.|+.+||...++|||
T Consensus 69 l~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRD 148 (953)
T KOG0587|consen 69 LKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRD 148 (953)
T ss_pred HHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeec
Confidence 34457999999988855543 33456788888885 8999998833 366699999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
||-.|||++.++.||++|||++.+..+-.
T Consensus 149 ikG~NiLLT~e~~VKLvDFGvSaQldsT~--------------------------------------------------- 177 (953)
T KOG0587|consen 149 IKGQNVLLTENAEVKLVDFGVSAQLDSTV--------------------------------------------------- 177 (953)
T ss_pred ccCceEEEeccCcEEEeeeeeeeeeeccc---------------------------------------------------
Confidence 99999999999999999999884431110
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-----CCCCccchHHHHHHH
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASDIYRLGVLL 262 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sDIwSlGvll 262 (712)
.+....+|||.|||||++... .|+..+|+||||++.
T Consensus 178 ---------------------------------------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITa 218 (953)
T KOG0587|consen 178 ---------------------------------------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITA 218 (953)
T ss_pred ---------------------------------------ccccCcCCCcccccceeeecccCCCCCcccccchhhcccee
Confidence 011226899999999999543 378899999999999
Q ss_pred HHhhCCCCC--ChhhHHHHHhhcccCCCchh--hhcCchhH-HHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 263 FELFCPFST--GEEKTRTMSSLRHRVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~pf~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
.||--|-++ ......++-.+-.. .|+.+ +..|.+.. +||..||..|-.+||++.++|+|||++...
T Consensus 219 IEladG~PPl~DmHPmraLF~IpRN-PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 219 IEMAEGAPPLCDMHPMRALFLIPRN-PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP 289 (953)
T ss_pred ehhcCCCCCccCcchhhhhccCCCC-CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence 999983222 22222333332222 23332 33444444 999999999999999999999999999443
No 391
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=3.2e-25 Score=214.67 Aligned_cols=232 Identities=20% Similarity=0.225 Sum_probs=164.0
Q ss_pred cccccccccCCCCCcce----eeeccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCC
Q 005147 7 RGERFGVRGDDSNDFEL----RKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (712)
Q Consensus 7 ~~~~~~~~~~~~~~~~~----r~~~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~ 80 (712)
.|+|++.++-..-...+ |-.++...|.-..|.|++..++ +..... ....+|+++|+...+|...|-.++. ++
T Consensus 77 dgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLD-ILQPph~dfFqEiYV~TELmQSDLHKIIVSPQ~-Ls 154 (449)
T KOG0664|consen 77 SGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLD-ILQPANPSFFQELYVLTELMQSDLHKIIVSPQA-LT 154 (449)
T ss_pred CccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHH-hcCCCCchHHHHHHHHHHHHHhhhhheeccCCC-CC
Confidence 35555555444322221 3446777888899999988887 332221 2236788889988899998866654 99
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhH
Q 005147 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (712)
Q Consensus 81 ~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (712)
...++-+++||++||.|||+.||.||||||.|.|++++..+||||||+++....++..
T Consensus 155 ~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~---------------------- 212 (449)
T KOG0664|consen 155 PDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL---------------------- 212 (449)
T ss_pred cchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh----------------------
Confidence 9999999999999999999999999999999999999999999999999643222100
Q ss_pred HHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccC
Q 005147 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (712)
Q Consensus 161 ~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (712)
.| +.-+-|.+|+|
T Consensus 213 -----------------------------------------------------------------hM--TqEVVTQYYRA 225 (449)
T KOG0664|consen 213 -----------------------------------------------------------------NM--THEVVTQYYRA 225 (449)
T ss_pred -----------------------------------------------------------------hh--HHHHHHHHhcc
Confidence 00 11345889999
Q ss_pred cccccCCC-CCCccchHHHHHHHHHhhC---CCCCC--------------hhhHHHHHh---------hcccCCCchhhh
Q 005147 241 PEELAGAP-VSCASDIYRLGVLLFELFC---PFSTG--------------EEKTRTMSS---------LRHRVLPPQLLL 293 (712)
Q Consensus 241 PE~~~~~~-~~~~sDIwSlGvll~eLl~---pf~~~--------------~~~~~~~~~---------~~~~~~~~~~~~ 293 (712)
||++.|.. |+.+.||||+||++.||+. -|... ....+.|.. ++....++.+..
T Consensus 226 PEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~v 305 (449)
T KOG0664|consen 226 PELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQR 305 (449)
T ss_pred HHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccc
Confidence 99999887 9999999999999999998 22211 111122221 122222222211
Q ss_pred c---------CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 294 K---------FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 294 ~---------~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
. ......++..+|..||.+|.+.++++.|++..+.+
T Consensus 306 LYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 306 LYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred eeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 1 11223788999999999999999999999876643
No 392
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=6.4e-24 Score=217.55 Aligned_cols=214 Identities=17% Similarity=0.241 Sum_probs=160.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc--Cc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--GI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~--gI 103 (712)
|+.-|-+.++||.||++|+ ++ ....+.||-|.||+ |.+|.-||+.. +.+++.+++.|+.||+.||.||... .|
T Consensus 516 REyrIHKeLDHpRIVKlYD-yf--slDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPI 591 (775)
T KOG1151|consen 516 REYRIHKELDHPRIVKLYD-YF--SLDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPI 591 (775)
T ss_pred HHHhhhhccCcceeeeeee-ee--eeccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 5666778899999999999 44 44567899988885 88888888544 4589999999999999999999975 79
Q ss_pred eeccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 104 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 104 vHrDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||-||||.|||+. ..|.+||.|||+++....++.. .+.|.-
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~------------------------------~vdGme------ 635 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYN------------------------------SVDGME------ 635 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccC------------------------------ccccee------
Confidence 9999999999996 4578999999999765443211 000000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--C--CCCccchH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--P--VSCASDIY 256 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~--~~~~sDIw 256 (712)
+ .....||.||.+||.+.-+ + .+.++|||
T Consensus 636 ---------------------------L--------------------TSQgAGTYWYLPPEcFvVgkePPKIsnKVDVW 668 (775)
T KOG1151|consen 636 ---------------------------L--------------------TSQGAGTYWYLPPECFVVGKEPPKISNKVDVW 668 (775)
T ss_pred ---------------------------e--------------------ecccCceeeecCcceeecCCCCCccccceeeE
Confidence 0 0014689999999988644 2 79999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHh-----hcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSS-----LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+||++|..+. ||.........+.. .....+|+. +...++..+||++||.+.-++|..+.++..||||...
T Consensus 669 SvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 669 SVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred eeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 99999999988 77654433322221 122334433 2244666799999999999999999999999999763
No 393
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=3.1e-23 Score=208.02 Aligned_cols=174 Identities=17% Similarity=0.281 Sum_probs=139.6
Q ss_pred ccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce
Q 005147 485 RCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL 564 (712)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~ 564 (712)
|+...++||...|-|+.|||+|..+ +++..|.++.+|+.++-.- ..++
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l---------------------------~tGsGD~TvR~WD~~TeTp-----~~t~ 153 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRL---------------------------VTGSGDTTVRLWDLDTETP-----LFTC 153 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceE---------------------------EecCCCceEEeeccCCCCc-----ceee
Confidence 4445566676666677777766666 4555565555554443222 1335
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC----CCEEEEEeCCC
Q 005147 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI----KSQIASSNFEG 640 (712)
Q Consensus 565 ~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~----~~~lasgs~Dg 640 (712)
.+|.++|.||+|+|||..||+|+.||.|++||..++.+.. ....+|+..|++++|.|.. ...||+++.||
T Consensus 154 KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g------~~l~gH~K~It~Lawep~hl~p~~r~las~skDg 227 (480)
T KOG0271|consen 154 KGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG------RALRGHKKWITALAWEPLHLVPPCRRLASSSKDG 227 (480)
T ss_pred cCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc------ccccCcccceeEEeecccccCCCccceecccCCC
Confidence 5899999999999999999999999999999998754322 3456899999999998853 45899999999
Q ss_pred cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEE
Q 005147 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 641 ~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
.|+|||+..++++..+.+|+.+|+||.|- ...+++|||.|++|++|+...|.+...
T Consensus 228 ~vrIWd~~~~~~~~~lsgHT~~VTCvrwG--G~gliySgS~DrtIkvw~a~dG~~~r~ 283 (480)
T KOG0271|consen 228 SVRIWDTKLGTCVRTLSGHTASVTCVRWG--GEGLIYSGSQDRTIKVWRALDGKLCRE 283 (480)
T ss_pred CEEEEEccCceEEEEeccCccceEEEEEc--CCceEEecCCCceEEEEEccchhHHHh
Confidence 99999999999999999999999999997 468999999999999999999877643
No 394
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.90 E-value=5e-23 Score=224.32 Aligned_cols=211 Identities=19% Similarity=0.280 Sum_probs=169.2
Q ss_pred CCCCCCcccccccCCCCCCCCccccC-CC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE-RS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~-~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
.-||..-|....|+||-+.+ +...| .+ ....+..+||..+|..+.| +|+ .-..+.++.|....+|...
T Consensus 447 L~GH~GPVyg~sFsPd~rfL-lScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F-~P~-GyYFatas~D~tArLWs~d 523 (707)
T KOG0263|consen 447 LYGHSGPVYGCSFSPDRRFL-LSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQF-APR-GYYFATASHDQTARLWSTD 523 (707)
T ss_pred eecCCCceeeeeecccccce-eeccCCcceeeeecccceeEEEecCCCcceeeEEe-cCC-ceEEEecCCCceeeeeecc
Confidence 66888999999999999988 33333 21 2345778899999988887 444 2222333344444457666
Q ss_pred CCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
+.. +.+|.+-|.|+.|+|+.+|+||||.|++|++||+.++ .......+|+++|++|+|+| +|.+||+|
T Consensus 524 ~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G-------~~VRiF~GH~~~V~al~~Sp-~Gr~LaSg 595 (707)
T KOG0263|consen 524 HNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG-------NSVRIFTGHKGPVTALAFSP-CGRYLASG 595 (707)
T ss_pred cCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCC-------cEEEEecCCCCceEEEEEcC-CCceEeec
Confidence 533 4589999999999999999999999999999999764 33455679999999999999 69999999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE-------------------E
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL-------------------L 697 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v-------------------~ 697 (712)
+.||.|.|||+.++..+.++.+|++.|.++.|++ +|.+||+||.|++|++||+..-... .
T Consensus 596 ~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~-dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (707)
T KOG0263|consen 596 DEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSR-DGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNAS 674 (707)
T ss_pred ccCCcEEEEEcCCCcchhhhhcccCceeEEEEec-CCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCC
Confidence 9999999999999999999999999999999996 9999999999999999998754333 1
Q ss_pred EEeceeeccCceeeC
Q 005147 698 HLVDVSFETKRTTVI 712 (712)
Q Consensus 698 ~~~~~~~~~~~~~~~ 712 (712)
.++.+.+.|++|||+
T Consensus 675 ~~llgs~~tK~tpv~ 689 (707)
T KOG0263|consen 675 SLLLGSFYTKNTPVV 689 (707)
T ss_pred cceeeeeeecCceEE
Confidence 234566778888774
No 395
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.89 E-value=1.3e-22 Score=196.54 Aligned_cols=172 Identities=22% Similarity=0.298 Sum_probs=144.1
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
+|.-.++||+..+.++.. ..||...+...-++.++ ||+.+|+ +.+|...|.+++|++|...++||+.|++|+
T Consensus 54 ~~~r~~~GHsH~v~dv~~---s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTik 130 (315)
T KOG0279|consen 54 VPVRRLTGHSHFVSDVVL---SSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIK 130 (315)
T ss_pred ceeeeeeccceEecceEE---ccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceee
Confidence 466788899988877776 56666666554455544 9998764 669999999999999999999999999999
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCC
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~ 672 (712)
+|++-.. ..+...+..++..|+||+|+|.. ..+|+++|+|++|++||+++-+...+|.+|++.++.+.+|| |
T Consensus 131 lwnt~g~------ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSp-D 203 (315)
T KOG0279|consen 131 LWNTLGV------CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSP-D 203 (315)
T ss_pred eeeeccc------EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECC-C
Confidence 9998541 12223333447899999999954 56999999999999999999999999999999999999998 9
Q ss_pred CCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 673 PTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|++++||+.||.+.+||++.++.++.+-
T Consensus 204 GslcasGgkdg~~~LwdL~~~k~lysl~ 231 (315)
T KOG0279|consen 204 GSLCASGGKDGEAMLWDLNEGKNLYSLE 231 (315)
T ss_pred CCEEecCCCCceEEEEEccCCceeEecc
Confidence 9999999999999999999999976553
No 396
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.89 E-value=1.4e-23 Score=222.62 Aligned_cols=200 Identities=21% Similarity=0.211 Sum_probs=161.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+.++++.+.|||+|+|++ +|..+ -+|||++|| +.|+|.+||+..++ .++....+.++.||..|++||..+++||
T Consensus 313 EAAvMKeikHpNLVqLLG-VCT~E---pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIH 388 (1157)
T KOG4278|consen 313 EAAVMKEIKHPNLVQLLG-VCTHE---PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIH 388 (1157)
T ss_pred HHHHHHhhcCccHHHHhh-hhccC---CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 445789999999999999 88544 467888887 69999999966544 3677788889999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|.|+..++.||++|||+++.+..+ --.|.+
T Consensus 389 RDLAARNCLVgEnhiVKvADFGLsRlMtgD-----------------------------------TYTAHA--------- 424 (1157)
T KOG4278|consen 389 RDLAARNCLVGENHIVKVADFGLSRLMTGD-----------------------------------TYTAHA--------- 424 (1157)
T ss_pred hhhhhhhccccccceEEeeccchhhhhcCC-----------------------------------ceeccc---------
Confidence 999999999999999999999998543222 100000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.-.| ..-|.|||-+....++.++|||+|||||||+
T Consensus 425 ------------------------------------GAKF---------PIKWTAPEsLAyNtFSiKSDVWAFGVLLWEI 459 (1157)
T KOG4278|consen 425 ------------------------------------GAKF---------PIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 459 (1157)
T ss_pred ------------------------------------CccC---------cccccCcccccccccccchhhHHHHHHHHHH
Confidence 1112 2348999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.| ||++ -+...++..+.++..........|....|++.||+++|.+||++.||-+
T Consensus 460 ATYGMsPYPG-idlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 460 ATYGMSPYPG-IDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HhcCCCCCCC-ccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 98 7754 4455677777777666666677788889999999999999999999855
No 397
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.89 E-value=6e-24 Score=198.63 Aligned_cols=164 Identities=16% Similarity=0.156 Sum_probs=130.4
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhc-Ccee
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 105 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvH 105 (712)
+.....+-|-+|.+|+ .+. ....+.+.||....||..+.+ +.+..+++...-+|+..++.||.|||++ .|||
T Consensus 97 i~~r~~~CPf~V~FyG-a~~---regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIH 172 (282)
T KOG0984|consen 97 IIMRTVDCPFTVHFYG-ALF---REGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIH 172 (282)
T ss_pred hhccCCCCCeEEEeeh-hhh---ccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhh
Confidence 3456678899999888 442 334578899999999988662 3455699999999999999999999996 9999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||+||+||||+..|+||+||||.+......
T Consensus 173 RDvKPsNiLIn~~GqVKiCDFGIsG~L~dS-------------------------------------------------- 202 (282)
T KOG0984|consen 173 RDVKPSNILINYDGQVKICDFGISGYLVDS-------------------------------------------------- 202 (282)
T ss_pred ccCCcceEEEccCCcEEEcccccceeehhh--------------------------------------------------
Confidence 999999999999999999999988322100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC----CCCCCccchHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVL 261 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDIwSlGvl 261 (712)
-.+. ...|...|||||.+.. ..|+.+|||||||++
T Consensus 203 -------------------iAkt----------------------~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt 241 (282)
T KOG0984|consen 203 -------------------IAKT----------------------MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT 241 (282)
T ss_pred -------------------hHHH----------------------HhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence 0011 1357889999998853 359999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLP 288 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~ 288 (712)
++||.+ ||..+...+..++.+.....|
T Consensus 242 miElA~lr~PY~~w~tpF~qLkqvVeep~P 271 (282)
T KOG0984|consen 242 MIEMAILRFPYESWGTPFQQLKQVVEEPSP 271 (282)
T ss_pred hhhhhhccccccccCCHHHHHHHHhcCCCC
Confidence 999998 898888888888877765544
No 398
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=1.9e-22 Score=202.48 Aligned_cols=206 Identities=19% Similarity=0.257 Sum_probs=160.8
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC---------CCCCceeeccCCCccceecccCCC----CCCcEEEEEcCCcEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER---------SSINNLGSKEGYSEGRRSGWINPF----LEGLCKYLSFSKLRVK 556 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~l~gh~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~ 556 (712)
..+|+.-|.|++|||||..++...-+. ...-.-.|+||...+.+++| .|. ....++..+.+....+
T Consensus 153 ~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Law-ep~hl~p~~r~las~skDg~vrI 231 (480)
T KOG0271|consen 153 CKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAW-EPLHLVPPCRRLASSSKDGSVRI 231 (480)
T ss_pred ecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEee-cccccCCCccceecccCCCCEEE
Confidence 347888999999999999876654332 22222478999999999999 433 2234445555555666
Q ss_pred EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcc-----c----------------------cCc
Q 005147 557 ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII-----N----------------------ENR 605 (712)
Q Consensus 557 ~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~-----~----------------------~~~ 605 (712)
||+..+.++ +|+.+|+|+.|--+ .+|++|+.|++||+|+...+. . ++.
T Consensus 232 Wd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t 310 (480)
T KOG0271|consen 232 WDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHT 310 (480)
T ss_pred EEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccc
Confidence 999887654 89999999999643 499999999999999986510 0 000
Q ss_pred c--------------------------------------------cccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 606 D--------------------------------------------IHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 606 ~--------------------------------------------~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
. .++|+ ...+|..-|+.|.|+| ++.++||+|+|.
T Consensus 311 ~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSP-d~r~IASaSFDk 389 (480)
T KOG0271|consen 311 GRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSP-DGRYIASASFDK 389 (480)
T ss_pred cccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECC-CccEEEEeeccc
Confidence 0 00111 2347888999999999 699999999999
Q ss_pred cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 641 ~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.|+|||.++|+-+.+|.+|-+.|+.|+|+ .|..+|+|||.|.++++||+++.+....+
T Consensus 390 SVkLW~g~tGk~lasfRGHv~~VYqvaws-aDsRLlVS~SkDsTLKvw~V~tkKl~~DL 447 (480)
T KOG0271|consen 390 SVKLWDGRTGKFLASFRGHVAAVYQVAWS-ADSRLLVSGSKDSTLKVWDVRTKKLKQDL 447 (480)
T ss_pred ceeeeeCCCcchhhhhhhccceeEEEEec-cCccEEEEcCCCceEEEEEeeeeeecccC
Confidence 99999999999999999999999999999 59999999999999999999986655443
No 399
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.88 E-value=2.7e-23 Score=225.91 Aligned_cols=157 Identities=19% Similarity=0.231 Sum_probs=125.7
Q ss_pred eccceeeccCCCCCccccccccccccc----ccCceEEEEeeCCccHHHhhcCC--CCCCChhHHHHHHHHHHHHHHHhh
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~----~~~~~~l~~e~~g~sL~~~l~~~--~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
.++.-+|+.++|+|||++++ +-+... ...++.+++++.||+|+..|+++ ...|++.+.+.++..++.||.|||
T Consensus 59 ~~EieilkKLnh~NIVk~f~-iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr 137 (732)
T KOG4250|consen 59 CREIEILKKLNHPNIVKLFD-IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR 137 (732)
T ss_pred HHHHHHHHHcCchhhhhhcc-cCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 36777899999999999988 443333 33456666666799999999654 345999999999999999999999
Q ss_pred hcCceeccCCCCceeec--CCCc--EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 100 SQGIVVHNVRPSCFVMS--SFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~--~~~~--vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
.+|||||||||.||++- .+|+ .|++|||.++.....+.
T Consensus 138 En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~-------------------------------------- 179 (732)
T KOG4250|consen 138 ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSL-------------------------------------- 179 (732)
T ss_pred HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCe--------------------------------------
Confidence 99999999999999996 3243 59999999966433210
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccc
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 254 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sD 254 (712)
-.+.+||..|.+||.+.. ..|+..+|
T Consensus 180 -----------------------------------------------------~~S~vGT~~YLhPel~E~q~~y~~tVD 206 (732)
T KOG4250|consen 180 -----------------------------------------------------FTSLVGTEEYLHPELYERQKKYTATVD 206 (732)
T ss_pred -----------------------------------------------------eeeecCchhhcChHHHhhccCcCceee
Confidence 022689999999999984 77999999
Q ss_pred hHHHHHHHHHhhC---CCCCChh
Q 005147 255 IYRLGVLLFELFC---PFSTGEE 274 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~ 274 (712)
.||+||++|++.| ||.+...
T Consensus 207 LWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 207 LWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred hhhhhhHHHHHhccCCCCCcCCC
Confidence 9999999999999 6655443
No 400
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.88 E-value=1.3e-23 Score=222.35 Aligned_cols=202 Identities=18% Similarity=0.182 Sum_probs=149.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+++.||||+.+++ +|. -.+++|+++|| ..|+|.+||.+... .+.-.....|+.||+.|++||.+.++|
T Consensus 584 kEIkiLsqLkhPNIveLvG-VC~---~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfV 659 (807)
T KOG1094|consen 584 KEIKILSRLKHPNIVELLG-VCV---QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFV 659 (807)
T ss_pred HHHHHHhccCCCCeeEEEe-eee---cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchh
Confidence 5566899999999999999 763 34578888888 58999999954432 235567778999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||.+.|+|++.++++||+|||+++..-+. |+
T Consensus 660 Hrd~a~rNcLv~~e~~iKiadfgmsR~lysg----------------------------------~y------------- 692 (807)
T KOG1094|consen 660 HRDLATRNCLVDGEFTIKIADFGMSRNLYSG----------------------------------DY------------- 692 (807)
T ss_pred hccccccceeecCcccEEecCcccccccccC----------------------------------Cc-------------
Confidence 9999999999999999999999998642111 11
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.++ +...+-...|||||.+.-++++++||+|++|+++||
T Consensus 693 ---------------------y~v--------------------qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE 731 (807)
T KOG1094|consen 693 ---------------------YRV--------------------QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWE 731 (807)
T ss_pred ---------------------eee--------------------ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHH
Confidence 000 000233568999999999999999999999999999
Q ss_pred hhC-----CCCCChhhHHHHHhhc----c---cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC-----PFSTGEEKTRTMSSLR----H---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~-----pf~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+++ ||....+. ....+.. + ..++....-......+++.+|+..+.++||+++++..
T Consensus 732 ~~~~C~e~Py~~lt~e-~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 732 VFMLCREQPYSQLTDE-QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred HHHHHhhCchhhhhHH-HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 987 77654332 2222211 1 1122222222334459999999999999999999844
No 401
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.88 E-value=3.5e-22 Score=221.70 Aligned_cols=183 Identities=20% Similarity=0.244 Sum_probs=124.7
Q ss_pred ceEEEEee-CCccHHHhhcCCC-----------------------CCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCC
Q 005147 56 PFVHAIEW-GDVSLRQWLDKPK-----------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (712)
Q Consensus 56 ~~~l~~e~-~g~sL~~~l~~~~-----------------------~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~ 111 (712)
..+++++| .+++|.++|.... ..+++..++.|+.||+.+|.|||++||+||||||+
T Consensus 259 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~ 338 (507)
T PLN03224 259 SQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPE 338 (507)
T ss_pred ceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchH
Confidence 45677777 6899999884321 12356678899999999999999999999999999
Q ss_pred ceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
||+++.++.++++|||++........ +
T Consensus 339 NILl~~~~~~kL~DFGla~~~~~~~~---------------------------------~-------------------- 365 (507)
T PLN03224 339 NLLVTVDGQVKIIDFGAAVDMCTGIN---------------------------------F-------------------- 365 (507)
T ss_pred hEEECCCCcEEEEeCcCccccccCCc---------------------------------c--------------------
Confidence 99999999999999998843211100 0
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--------------------CC-
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--------------------VS- 250 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--------------------~~- 250 (712)
......+++.|+|||++.... |+
T Consensus 366 ------------------------------------~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~ 409 (507)
T PLN03224 366 ------------------------------------NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGR 409 (507)
T ss_pred ------------------------------------CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCC
Confidence 000023478999999885432 11
Q ss_pred -CccchHHHHHHHHHhhCCCC-CChh------hHH-------HHHhhcccCCC-chhhhcCchhHHHHHHcCCCCC---C
Q 005147 251 -CASDIYRLGVLLFELFCPFS-TGEE------KTR-------TMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEP---S 311 (712)
Q Consensus 251 -~~sDIwSlGvll~eLl~pf~-~~~~------~~~-------~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP---~ 311 (712)
.+.||||+||++|+|++|.. +... ... .+.......+. +.+....+...+|+.+||..+| .
T Consensus 410 ~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~ 489 (507)
T PLN03224 410 PDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANR 489 (507)
T ss_pred CCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcc
Confidence 24799999999999998432 1110 000 00111111111 1122233455599999999866 6
Q ss_pred CCCCHHHHhcCcCCCC
Q 005147 312 GRPKMGELLQSEFLNE 327 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~ 327 (712)
+|+|+.|+|+||||..
T Consensus 490 ~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 490 GRLSVGQALSHRFFLP 505 (507)
T ss_pred cCCCHHHHhCCCCcCC
Confidence 8999999999999975
No 402
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.87 E-value=9.8e-23 Score=206.24 Aligned_cols=188 Identities=20% Similarity=0.250 Sum_probs=157.3
Q ss_pred ccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee--
Q 005147 497 VRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL-- 565 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~-- 565 (712)
|..+.|.|+|+++.+..... .++..+.+..|.++|.+..| +.++.-.+.....+.++ |+..-....
T Consensus 99 V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~w---s~~g~wmiSgD~gG~iKyWqpnmnnVk~~ 175 (464)
T KOG0284|consen 99 VNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKW---SHNGTWMISGDKGGMIKYWQPNMNNVKII 175 (464)
T ss_pred eeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEE---ccCCCEEEEcCCCceEEecccchhhhHHh
Confidence 56788999999883333222 34566788899999999999 67777777777777777 776543322
Q ss_pred --cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEE
Q 005147 566 --NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 566 --~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~ 643 (712)
.|...|.+++|+|....|+||+.|++|+|||+... +......+|.-.|.||+||| .+.+||+||.|..|+
T Consensus 176 ~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~-------kee~vL~GHgwdVksvdWHP-~kgLiasgskDnlVK 247 (464)
T KOG0284|consen 176 QAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMP-------KEERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLVK 247 (464)
T ss_pred hHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCC-------chhheeccCCCCcceeccCC-ccceeEEccCCceeE
Confidence 35699999999999999999999999999999652 22334578999999999999 599999999999999
Q ss_pred EEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+||.+++.|+.++.+|...|..+.|+| ++++|+|+|.|..++++|+++-+.+
T Consensus 248 lWDprSg~cl~tlh~HKntVl~~~f~~-n~N~Llt~skD~~~kv~DiR~mkEl 299 (464)
T KOG0284|consen 248 LWDPRSGSCLATLHGHKNTVLAVKFNP-NGNWLLTGSKDQSCKVFDIRTMKEL 299 (464)
T ss_pred eecCCCcchhhhhhhccceEEEEEEcC-CCCeeEEccCCceEEEEehhHhHHH
Confidence 999999999999999999999999998 8899999999999999999965544
No 403
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.87 E-value=2.3e-23 Score=227.19 Aligned_cols=203 Identities=16% Similarity=0.194 Sum_probs=163.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..|+.+.+||||+.|.+ +- ....+++|+.|| ..|+|..||+++...++..+...+++.|+.|+.||-+.|+||
T Consensus 679 ~EAsIMGQFdHPNIIrLEG-VV---Tks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVH 754 (996)
T KOG0196|consen 679 SEASIMGQFDHPNIIRLEG-VV---TKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVH 754 (996)
T ss_pred hhhhhcccCCCCcEEEEEE-EE---ecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchh
Confidence 5667899999999999888 43 344678888888 699999999888777999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|||++.+-..|+.|||+++....+. +
T Consensus 755 RDLAARNILVNsnLvCKVsDFGLSRvledd~-~----------------------------------------------- 786 (996)
T KOG0196|consen 755 RDLAARNILVNSNLVCKVSDFGLSRVLEDDP-E----------------------------------------------- 786 (996)
T ss_pred hhhhhhheeeccceEEEeccccceeecccCC-C-----------------------------------------------
Confidence 9999999999999999999999996442221 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
..++ ..... -...|.|||.+.-.+++.+|||||+|++|||.
T Consensus 787 -----~~yt-------------------------t~GGK---------IPiRWTAPEAIa~RKFTsASDVWSyGIVmWEV 827 (996)
T KOG0196|consen 787 -----AAYT-------------------------TLGGK---------IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 827 (996)
T ss_pred -----cccc-------------------------ccCCc---------cceeecChhHhhhcccCchhhccccceEEEEe
Confidence 0000 00000 13579999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||....+. .+++.+.++..-|...........|++.||++|-..||++.+|+.
T Consensus 828 mSyGERPYWdmSNQ-dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 828 MSYGERPYWDMSNQ-DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred cccCCCcccccchH-HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 98 88766655 566666666554444455555669999999999999999999977
No 404
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=3.5e-22 Score=191.10 Aligned_cols=192 Identities=21% Similarity=0.257 Sum_probs=162.9
Q ss_pred CCCCCC-CccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC----ceecCCCCeeEEEEcC
Q 005147 504 SDGRTS-KPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG----DLLNSSNLVCSLSFDR 578 (712)
Q Consensus 504 ~~g~~~-~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~----~~~~h~~~V~~i~f~~ 578 (712)
+.|.|+ .++.......|+..+++|..+|++++| +......+...+++....+|+..-+ ++.||.+-|....|+|
T Consensus 79 a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdw-n~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp 157 (311)
T KOG0277|consen 79 ASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDW-NTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSP 157 (311)
T ss_pred EecCceEEEeccCCCCcchhHHHhhhhheEEecc-ccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCC
Confidence 456665 566776777899999999999999999 6655555555678877777887643 3558999999999999
Q ss_pred -CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEe
Q 005147 579 -DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEM 656 (712)
Q Consensus 579 -~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~ 656 (712)
.+++|+++|.|+++++||++.. ..+.....|...+.|+.|+.++.+.++||+.|+.|++||+|.- .++..+
T Consensus 158 ~~~nlfas~Sgd~~l~lwdvr~~-------gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL 230 (311)
T KOG0277|consen 158 HIPNLFASASGDGTLRLWDVRSP-------GKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL 230 (311)
T ss_pred CCCCeEEEccCCceEEEEEecCC-------CceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceee
Confidence 6789999999999999999752 2334467889999999999999999999999999999999975 689999
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEecee
Q 005147 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 657 ~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
.+|+-.|+.|+|||....+|||+|.|=+++|||...+......++.|
T Consensus 231 ~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~H 277 (311)
T KOG0277|consen 231 NGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHH 277 (311)
T ss_pred cCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhcc
Confidence 99999999999999889999999999999999998777766666555
No 405
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.87 E-value=2.3e-22 Score=245.88 Aligned_cols=190 Identities=16% Similarity=0.189 Sum_probs=135.2
Q ss_pred ceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh---hcCce
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---SQGIV 104 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH---s~gIv 104 (712)
...++.++||||+++++ +|.+. ..+++++|| .+++|.++++ .+++.++..|+.||+.||+||| +.+|+
T Consensus 734 ~~~l~~l~HpnIv~~~~-~~~~~---~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 805 (968)
T PLN00113 734 IADMGKLQHPNIVKLIG-LCRSE---KGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVV 805 (968)
T ss_pred HHHHhhCCCCCcceEEE-EEEcC---CCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCee
Confidence 55678899999999888 55332 345666666 6999999994 2789999999999999999999 67999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++..+..++. ++.......
T Consensus 806 H~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-------------------------------------------------- 834 (968)
T PLN00113 806 VGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-------------------------------------------------- 834 (968)
T ss_pred cCCCCHHhEEECCCCceEEE-ecccccccc--------------------------------------------------
Confidence 99999999999987777664 332210000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....|++.|+|||++.+..++.++|||||||++||
T Consensus 835 --------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~e 870 (968)
T PLN00113 835 --------------------------------------------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIE 870 (968)
T ss_pred --------------------------------------------CCCccccccccCcccccCCCCCcccchhhHHHHHHH
Confidence 001356889999999998889999999999999999
Q ss_pred hhC---CCCCChh---hHHHHHh--hc--------ccCCCc---hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC---PFSTGEE---KTRTMSS--LR--------HRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~---pf~~~~~---~~~~~~~--~~--------~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ....+.. .. ...... .......+..+++.+||+.+|++|||+.|+++
T Consensus 871 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 871 LLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 999 5432111 0000000 00 000000 00111123448899999999999999999987
No 406
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.87 E-value=1.5e-22 Score=208.45 Aligned_cols=248 Identities=18% Similarity=0.199 Sum_probs=152.7
Q ss_pred eeeccceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 24 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 24 r~~~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
|-..+...|.. .++.||+++.+ . -.+.+..+++++| .....++++. .++..+++.+++.++.||.++|.+
T Consensus 80 ri~~El~~L~~~gG~~ni~~~~~-~---~rnnd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 80 RILNELEMLYRLGGSDNIIKLNG-C---FRNNDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred HHHHHHHHHHHhccchhhhcchh-h---hccCCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhcc
Confidence 33344444544 57888888777 3 3456677777777 6778888773 378999999999999999999999
Q ss_pred CceeccCCCCceeec-CCCcEEEEecccccCCCCCC-cccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 102 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDS-HEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 102 gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
|||||||||+||+.+ ..+.-.++|||++....... .+. -...+.+ ..+.+.+.
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~-------------------s~~~~~~------~~~~~~g~ 206 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEH-------------------SRSYSGR------HATPAMGK 206 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhhhh-------------------hhhhhcc------cCCccccC
Confidence 999999999999998 45677899999996421110 000 0000000 00000000
Q ss_pred CCcccccccCCCcccccccccccccccccccccccccccccc--CCCCcccccccccCccccCcccccCCC-CCCccchH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAP-VSCASDIY 256 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIw 256 (712)
....-.+ -++ +....-.+ ....|.......||++|+|||++...+ .++++|||
T Consensus 207 ~~~~~~~------~~~------------------~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 207 DVHCQSV------ATA------------------SKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred ccccccc------ccc------------------cCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 0000000 000 00000000 111222233468999999999998776 79999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHh---------------hccc--------------------------CCC----
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSS---------------LRHR--------------------------VLP---- 288 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~---------------~~~~--------------------------~~~---- 288 (712)
|.||++.-+++ ||+...+...+... +... ..+
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~ 342 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP 342 (418)
T ss_pred eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence 99999999998 77643221111110 0000 000
Q ss_pred ----chhhhcCc-hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 289 ----PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 289 ----~~~~~~~~-~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
......++ ...+|+.+||..||.+|.|++++|+||||...
T Consensus 343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00111122 33499999999999999999999999999944
No 407
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.87 E-value=4.8e-23 Score=218.42 Aligned_cols=183 Identities=28% Similarity=0.464 Sum_probs=154.1
Q ss_pred ceEEEEeeC-CccHHHhhc--CCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCC
Q 005147 56 PFVHAIEWG-DVSLRQWLD--KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (712)
Q Consensus 56 ~~~l~~e~~-g~sL~~~l~--~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~ 132 (712)
.++|.|+++ ..+|.+||. ......+...++.++.|+..+++| +|.+|+|+||.||+...+.++||.|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 467777775 889999993 445567899999999999999999 99999999999999998889999988887443
Q ss_pred CCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 005147 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (712)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (712)
...+ |....++
T Consensus 407 ~~~~---------------------------------------------------~~~~~~a------------------ 417 (516)
T KOG1033|consen 407 DKDE---------------------------------------------------TVAPAAA------------------ 417 (516)
T ss_pred ccCC---------------------------------------------------cccchhh------------------
Confidence 2210 0000000
Q ss_pred cccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCchhh
Q 005147 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLL 292 (712)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~ 292 (712)
..+..+||.|||+||.+.+..|+.++|||+||++||||+.+|....+...++.+++++++|+.+.
T Consensus 418 ---------------~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~ 482 (516)
T KOG1033|consen 418 ---------------SHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFL 482 (516)
T ss_pred ---------------hhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHh
Confidence 11236899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 293 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 293 ~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
..+|....|+.+||.+.|.+||++.+.--|+|.
T Consensus 483 ~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 483 QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 999999999999999999999977776666654
No 408
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-22 Score=218.87 Aligned_cols=205 Identities=16% Similarity=0.129 Sum_probs=160.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..++-.+.|+|+++||+.+. ..++++|+|+ ..|+|.+.|++ ....|.......|+.||+.|+.||-++++|
T Consensus 160 rEas~M~~L~H~hliRLyGvVl-----~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlv 234 (1039)
T KOG0199|consen 160 REASHMLKLQHPHLIRLYGVVL-----DQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLV 234 (1039)
T ss_pred HHHHHHHhccCcceeEEeeeec-----cchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4555788899999999999554 2567888888 59999999965 455688888999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||-..|+++-....|||+|||+.+..|..+-... |+
T Consensus 235 HRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv------------------------------m~------------ 272 (1039)
T KOG0199|consen 235 HRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV------------------------------MA------------ 272 (1039)
T ss_pred hhhhhhhhheecccceeeeecccceeccCCCCcceE------------------------------ec------------
Confidence 999999999999999999999999977655420000 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
. ...-...|+|||.++...++.+||+|++||++||
T Consensus 273 --------------------p-------------------------~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWE 307 (1039)
T KOG0199|consen 273 --------------------P-------------------------QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWE 307 (1039)
T ss_pred --------------------C-------------------------CCcCcccccCHhHhccccccccchhhhhhhhHHh
Confidence 0 0112456999999999999999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
||+ ||.+... ..+++.+..+..-+.......+..+++..||..+|++|||+..|...-+
T Consensus 308 MFtyGEePW~G~~g-~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 308 MFTYGEEPWVGCRG-IQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred hhccCCCCCCCCCH-HHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 999 6665443 4555666555544444445556669999999999999999998865433
No 409
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.87 E-value=7.2e-23 Score=216.59 Aligned_cols=147 Identities=26% Similarity=0.362 Sum_probs=123.0
Q ss_pred ccceeeccCC---CCCcccccccccccccccCceEEEEee--CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~---H~ni~~~~~~~~~~~~~~~~~~l~~e~--~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
.+..||+.++ |+||+++++ +|++. +.||+.+|. .|.+|.++|... ..+++.++..||+|++.|+++||++
T Consensus 615 ~EIqIla~l~~~sH~NIlKlLd-fFEdd---d~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~~ 689 (772)
T KOG1152|consen 615 SEIQILATLNKHSHENILKLLD-FFEDD---DYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHDQ 689 (772)
T ss_pred hhHHHHHHhhhcCccchhhhhh-eeecC---CeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhcccccccc
Confidence 5666788877 999999999 77543 457888887 589999999443 3499999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||||-+|++++.+|-+|+||||.+...... -|
T Consensus 690 ~ivhrdikdenvivd~~g~~klidfgsaa~~ksg----------------------------------pf---------- 725 (772)
T KOG1152|consen 690 GIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG----------------------------------PF---------- 725 (772)
T ss_pred CceecccccccEEEecCCeEEEeeccchhhhcCC----------------------------------Cc----------
Confidence 9999999999999999999999999987322110 11
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGv 260 (712)
-..+||..|+|||++.|.+| +..-|||+||+
T Consensus 726 ------------------------------------------------d~f~gtv~~aapevl~g~~y~gk~qdiwalgi 757 (772)
T KOG1152|consen 726 ------------------------------------------------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGI 757 (772)
T ss_pred ------------------------------------------------ceeeeeccccchhhhCCCccCCCcchhhhhhh
Confidence 01689999999999999986 78999999999
Q ss_pred HHHHhhC---CCC
Q 005147 261 LLFELFC---PFS 270 (712)
Q Consensus 261 ll~eLl~---pf~ 270 (712)
+||-++. ||.
T Consensus 758 llytivykenpyy 770 (772)
T KOG1152|consen 758 LLYTIVYKENPYY 770 (772)
T ss_pred eeeEEEeccCCCc
Confidence 9999886 664
No 410
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.86 E-value=4e-21 Score=184.54 Aligned_cols=210 Identities=17% Similarity=0.177 Sum_probs=173.2
Q ss_pred CCCCCCCCcccccccCCCCCCCCccccCCC----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 488 PVKPSGRPLVRHSQLSSDGRTSKPLVNERS----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
+.+.++..+++++.|++||+.++..+.++. .......+||.+.|..+.| .+....++..++.++...+|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w-~~~~~d~~atas~dk~ir~w 92 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCW-DPKHPDLFATASGDKTIRIW 92 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhhee-CCCCCcceEEecCCceEEEE
Confidence 467788899999999999998866554432 2234567899999999999 77777788888888888889
Q ss_pred EccCCceec---CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC----------------------------cc
Q 005147 558 DLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----------------------------RD 606 (712)
Q Consensus 558 dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~----------------------------~~ 606 (712)
|.+.+++.. ....-.-+.|+|+|++++.++.|..|.+.|.++..... ..
T Consensus 93 d~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ 172 (313)
T KOG1407|consen 93 DIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVE 172 (313)
T ss_pred EeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEE
Confidence 999988763 35555678999999999999999999999998721000 00
Q ss_pred -----cccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE
Q 005147 607 -----IHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 607 -----~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs 680 (712)
...|+ ...+|.+...||.|+| ++.+||+|+.|..|.|||+...-|++.+..|..+|..++|+ .||++|||||
T Consensus 173 ILsypsLkpv~si~AH~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS-~dg~~lASaS 250 (313)
T KOG1407|consen 173 ILSYPSLKPVQSIKAHPSNCICIEFDP-DGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFS-HDGRMLASAS 250 (313)
T ss_pred EEeccccccccccccCCcceEEEEECC-CCceEeeccccceeeccChhHhhhheeeccccCceEEEEec-cCcceeeccC
Confidence 00112 2347889999999999 69999999999999999999999999999999999999999 6999999999
Q ss_pred CCCcEEEEeCCCCcEEEEEe
Q 005147 681 DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|..|-|-++.+|..+-.+-
T Consensus 251 EDh~IDIA~vetGd~~~eI~ 270 (313)
T KOG1407|consen 251 EDHFIDIAEVETGDRVWEIP 270 (313)
T ss_pred ccceEEeEecccCCeEEEee
Confidence 99999999999999886653
No 411
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.86 E-value=6.9e-21 Score=185.61 Aligned_cols=204 Identities=14% Similarity=0.134 Sum_probs=155.9
Q ss_pred hhccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCC-----------CccceecccCCCCCCcEEEEEcC
Q 005147 483 LTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY-----------SEGRRSGWINPFLEGLCKYLSFS 551 (712)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~-----------~~~~~~~~~~~~~~~~~~~~~~~ 551 (712)
.++.++.+.||..++.+.-|++|++.+...+.+ ...+..-.++ ..|-...+ +|+ ...++....+
T Consensus 44 ~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqD---GklIvWDs~TtnK~haipl~s~WVMtCA~-sPS-g~~VAcGGLd 118 (343)
T KOG0286|consen 44 QMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQD---GKLIVWDSFTTNKVHAIPLPSSWVMTCAY-SPS-GNFVACGGLD 118 (343)
T ss_pred eeeeEEEecccccceeeeEecCCcCeEEeeccC---CeEEEEEcccccceeEEecCceeEEEEEE-CCC-CCeEEecCcC
Confidence 334445678999999999999998876211111 1122222222 22333344 232 2344444555
Q ss_pred CcEEEEEccCC----------ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeE
Q 005147 552 KLRVKADLNQG----------DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (712)
Q Consensus 552 ~~~v~~dl~~~----------~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~ 621 (712)
+...++++.+. .+.+|.+.++|+.|-+ ...|+|+|.|.++.+||+.+++ ......+|...|.
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~-------~~~~f~GH~gDV~ 190 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQ-------QTQVFHGHTGDVM 190 (343)
T ss_pred ceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccce-------EEEEecCCcccEE
Confidence 55556666533 2568999999999987 5578899999999999997743 3445679999999
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 622 ~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++++.|.+++.|+||+.|+..+|||+|.+.++++|.+|+..|++|.|.| +|.-|++||+|+++++||+|....+..+-
T Consensus 191 slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP-~G~afatGSDD~tcRlyDlRaD~~~a~ys 268 (343)
T KOG0286|consen 191 SLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFP-SGDAFATGSDDATCRLYDLRADQELAVYS 268 (343)
T ss_pred EEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEcc-CCCeeeecCCCceeEEEeecCCcEEeeec
Confidence 9999998899999999999999999999999999999999999999998 99999999999999999999988886553
No 412
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.86 E-value=5.9e-21 Score=196.59 Aligned_cols=200 Identities=20% Similarity=0.256 Sum_probs=154.5
Q ss_pred CCCcccccccCCCCCCCCccccCCC-------CCCceeeccCCCccceecc-------cCCCCCCcEEEEEcCCcEEE--
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNERS-------SINNLGSKEGYSEGRRSGW-------INPFLEGLCKYLSFSKLRVK-- 556 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~l~gh~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~-- 556 (712)
.+..|++..|+.||..+++.+.+.. ..-..+|--|.++++.+.| +++..|+++.+|+..++.+.
T Consensus 234 ~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~ 313 (524)
T KOG0273|consen 234 SNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQ 313 (524)
T ss_pred ccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEe
Confidence 3457999999999998866544321 2233467789999999988 22334555555554333221
Q ss_pred ------------EEc----------------------cCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccc
Q 005147 557 ------------ADL----------------------NQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN 602 (712)
Q Consensus 557 ------------~dl----------------------~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~ 602 (712)
|.- ..+++.||.+.|.++.|+|.+.+|+|||.|+++|||......
T Consensus 314 f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~- 392 (524)
T KOG0273|consen 314 FEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN- 392 (524)
T ss_pred eeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc-
Confidence 100 122355799999999999999999999999999999975321
Q ss_pred cCcccccceEEecCCCCeEEEEEcCCC--------CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 603 ENRDIHYPVVEMASRSKLSSICWNSYI--------KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 603 ~~~~~~~~~~~~~~~~~v~~v~~~p~~--------~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
+.-...+|...|..+.|+|.+ +..+|+++.|++|++||+..+.++.+|..|..+|++|+|+| ++.
T Consensus 393 ------~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~-~g~ 465 (524)
T KOG0273|consen 393 ------SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSP-NGR 465 (524)
T ss_pred ------chhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecC-CCc
Confidence 122345678888888887742 45899999999999999999999999999999999999998 999
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++|+||.|+.|.+|++++++.+..+-
T Consensus 466 ylAsGs~dg~V~iws~~~~~l~~s~~ 491 (524)
T KOG0273|consen 466 YLASGSLDGCVHIWSTKTGKLVKSYQ 491 (524)
T ss_pred EEEecCCCCeeEeccccchheeEeec
Confidence 99999999999999999999887654
No 413
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.86 E-value=1.5e-21 Score=224.08 Aligned_cols=201 Identities=16% Similarity=0.194 Sum_probs=155.2
Q ss_pred cceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHHH
Q 005147 28 DGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 90 (712)
Q Consensus 28 ~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~q 90 (712)
+..++.. ..|+||+.+++ ++.. ..+++++.|+ ..|+|.++|+... ..++..+...+..|
T Consensus 351 El~~m~~~g~H~niv~llG-~~t~---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~Q 426 (609)
T KOG0200|consen 351 ELNVLKELGKHPNIVNLLG-ACTQ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQ 426 (609)
T ss_pred HHHHHHHhcCCcchhhhee-eecc---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHH
Confidence 3334555 46999999999 5533 3445555555 7999999995544 23888999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.|++||++.++|||||-..|||+..+..+||+|||++++.........
T Consensus 427 Ia~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~------------------------------ 476 (609)
T KOG0200|consen 427 IANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRT------------------------------ 476 (609)
T ss_pred HHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEe------------------------------
Confidence 99999999999999999999999999999999999999975422210000
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccccccccc--CccccCcccccCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME--TNWYASPEELAGAP 248 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~ 248 (712)
....| ...|||||.+....
T Consensus 477 -----------------------------------------------------------~~~~~~LP~kWmApEsl~~~~ 497 (609)
T KOG0200|consen 477 -----------------------------------------------------------KSSAGTLPVKWMAPESLFDRV 497 (609)
T ss_pred -----------------------------------------------------------cCCCCccceeecCHHHhccCc
Confidence 00011 23499999999988
Q ss_pred CCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 249 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 249 ~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+.++||||+||+|||+++ ||.........+..++.+..........++..++++.||+.+|++||++.++.+
T Consensus 498 ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 498 FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 9999999999999999998 887644344456667777666666666667779999999999999999999866
No 414
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=7.2e-22 Score=203.99 Aligned_cols=228 Identities=17% Similarity=0.188 Sum_probs=163.0
Q ss_pred cccccccccccCCCCCcc-eeeeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChh
Q 005147 5 LLRGERFGVRGDDSNDFE-LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVY 82 (712)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~-~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~ 82 (712)
..+||.++|+=-.+++.. +.+|+|..---.+.|+||++++..-..+......++++.+| +.|||.|||.. ..++..
T Consensus 231 ~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~ 308 (513)
T KOG2052|consen 231 RWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTE 308 (513)
T ss_pred cccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh--ccCCHH
Confidence 468999999887776643 45566666666789999999887555444444467777777 79999999955 348999
Q ss_pred HHHHHHHHHHHHHHHhhh-----c---CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCC
Q 005147 83 ECLHIFRQIVEIVYAAHS-----Q---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 154 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs-----~---gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (712)
..++++..++.||++||. + .|+|||||..|||+..+|..-|+|+|++-....+.
T Consensus 309 ~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t------------------ 370 (513)
T KOG2052|consen 309 GMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDT------------------ 370 (513)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccC------------------
Confidence 999999999999999996 2 59999999999999999999999999984321110
Q ss_pred CCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccccccccc
Q 005147 155 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 234 (712)
Q Consensus 155 ~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g 234 (712)
+.+ ....+..+|
T Consensus 371 ----------------------------------------------------~~i----------------di~~N~rVG 382 (513)
T KOG2052|consen 371 ----------------------------------------------------DTI----------------DIPPNPRVG 382 (513)
T ss_pred ----------------------------------------------------Ccc----------------cCCCCCccc
Confidence 000 011223799
Q ss_pred CccccCcccccCCC------CCCccchHHHHHHHHHhhC-------------CCCC---ChhhHHHHHhhc-ccCCCchh
Q 005147 235 TNWYASPEELAGAP------VSCASDIYRLGVLLFELFC-------------PFST---GEEKTRTMSSLR-HRVLPPQL 291 (712)
Q Consensus 235 t~~Y~aPE~~~~~~------~~~~sDIwSlGvll~eLl~-------------pf~~---~~~~~~~~~~~~-~~~~~~~~ 291 (712)
|..|||||++.... .-..+||||||.++||+.. ||.. .+...+.|.++. -..+.|..
T Consensus 383 TKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~i 462 (513)
T KOG2052|consen 383 TKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNI 462 (513)
T ss_pred eeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCC
Confidence 99999999995543 2347999999999999985 5543 233344444432 22222222
Q ss_pred hh---cCchh---HHHHHHcCCCCCCCCCCHHHHh
Q 005147 292 LL---KFPKE---ASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 292 ~~---~~~~~---~~li~~~L~~dP~~Rpt~~eiL 320 (712)
++ ..+.. ..+++.||..+|..|.|+-.|.
T Consensus 463 pnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 463 PNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred CcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 22 22322 3789999999999999876553
No 415
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.85 E-value=5.1e-20 Score=179.63 Aligned_cols=175 Identities=16% Similarity=0.212 Sum_probs=146.9
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
..-+|+||.+.|+..+| ..|....+....+++++ ||.-+..-. -.+.+|..++|+|.|+++|+||.|+.+-|
T Consensus 47 ~rr~LkGH~~Ki~~~~w---s~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDW---STDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSI 123 (343)
T ss_pred eEEEecccccceeeeEe---cCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEE
Confidence 44789999999999999 55555555555666655 998765422 35899999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
|++.+..++. .........+|.+.++|+.|-+ ..+|+|||.|.++.+||+++++.+..|.+|++.|.+++++|.+++
T Consensus 124 y~ls~~d~~g-~~~v~r~l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 124 YPLSTRDAEG-NVRVSRELAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGN 200 (343)
T ss_pred Eecccccccc-cceeeeeecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCC
Confidence 9997522211 1122234679999999999986 579999999999999999999999999999999999999998999
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|+||+-|++.+|||+|.+.++.++.
T Consensus 201 tFvSg~cD~~aklWD~R~~~c~qtF~ 226 (343)
T KOG0286|consen 201 TFVSGGCDKSAKLWDVRSGQCVQTFE 226 (343)
T ss_pred eEEecccccceeeeeccCcceeEeec
Confidence 99999999999999999998887665
No 416
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.84 E-value=3.3e-21 Score=207.35 Aligned_cols=207 Identities=18% Similarity=0.220 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
-+..++..-+||||+.+|+ -| .-.+.+.++||| +|++|.+...- -..+++.++.++++..+.+|.|||++|-+|
T Consensus 61 qei~~~~dc~h~nivay~g-sy---lr~dklwicMEycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs~gk~h 135 (829)
T KOG0576|consen 61 QEIGMLRDCRHPNIVAYFG-SY---LRRDKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHSQGKIH 135 (829)
T ss_pred cceeeeecCCCcChHHHHh-hh---hhhcCcEEEEEecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhcCCccc
Confidence 3456688899999999887 33 233456777777 58999985533 345999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||||-.||+++..|.||+.|||.+.+++--.
T Consensus 136 RdiKGanilltd~gDvklaDfgvsaqitati------------------------------------------------- 166 (829)
T KOG0576|consen 136 RDIKGANILLTDEGDVKLADFGVSAQITATI------------------------------------------------- 166 (829)
T ss_pred ccccccceeecccCceeecccCchhhhhhhh-------------------------------------------------
Confidence 9999999999999999999999885442210
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc---cCCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~~~~sDIwSlGvll 262 (712)
.+.....||++|||||+. +.+.|...+|||++|++.
T Consensus 167 -----------------------------------------~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitA 205 (829)
T KOG0576|consen 167 -----------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITA 205 (829)
T ss_pred -----------------------------------------hhhhcccCCccccchhHHHHHhcccccccccccccccch
Confidence 011226899999999987 455699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhh--cCchh-HHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
.||-- |.+........+.--.....|+.+.. .|... .+|++.+|..+|++|||++.+|+|||+...
T Consensus 206 iel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 206 IELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 98876 44433222222222222333443332 34333 399999999999999999999999999876
No 417
>PTZ00421 coronin; Provisional
Probab=99.84 E-value=1.7e-19 Score=200.46 Aligned_cols=135 Identities=18% Similarity=0.255 Sum_probs=116.9
Q ss_pred eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcE
Q 005147 564 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (712)
Q Consensus 564 ~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V 642 (712)
+.+|.+.|.+++|+| ++++|||||.|++|+|||+.+...............+|...|.+|+|+|...++|++|+.|++|
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 568999999999999 8899999999999999999753211111112234568999999999999656899999999999
Q ss_pred EEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 643 ~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|||+.+++.+..+.+|...|++++|+| ++.+|++|+.|++|+|||+++++.+.++
T Consensus 151 rIWDl~tg~~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl 206 (493)
T PTZ00421 151 NVWDVERGKAVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSV 206 (493)
T ss_pred EEEECCCCeEEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEE
Confidence 9999999999999999999999999998 9999999999999999999999887654
No 418
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=6.6e-20 Score=177.17 Aligned_cols=169 Identities=18% Similarity=0.328 Sum_probs=138.0
Q ss_pred ccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCc--EEEEEccCC
Q 005147 485 RCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL--RVKADLNQG 562 (712)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~dl~~~ 562 (712)
++...-.+|+..|++++|+|.|+.+ .+++.|.++.+|.-.++ .+. .
T Consensus 52 ck~vld~~hkrsVRsvAwsp~g~~L---------------------------a~aSFD~t~~Iw~k~~~efecv-----~ 99 (312)
T KOG0645|consen 52 CKTVLDDGHKRSVRSVAWSPHGRYL---------------------------ASASFDATVVIWKKEDGEFECV-----A 99 (312)
T ss_pred EEEeccccchheeeeeeecCCCcEE---------------------------EEeeccceEEEeecCCCceeEE-----e
Confidence 3334445777788888888888877 56677777777764433 332 2
Q ss_pred ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcE
Q 005147 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (712)
Q Consensus 563 ~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V 642 (712)
.+.||.+.|.|++|+++|++||||+.|+.|-||.+.. .....+..+...|...|-.|.||| +..+|+|+|||.+|
T Consensus 100 ~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~de----ddEfec~aVL~~HtqDVK~V~WHP-t~dlL~S~SYDnTI 174 (312)
T KOG0645|consen 100 TLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDE----DDEFECIAVLQEHTQDVKHVIWHP-TEDLLFSCSYDNTI 174 (312)
T ss_pred eeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecC----CCcEEEEeeeccccccccEEEEcC-CcceeEEeccCCeE
Confidence 3558999999999999999999999999999999963 223344556778999999999999 68999999999999
Q ss_pred EEEECC---CCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 643 QVWDVS---RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 643 ~lwD~~---~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
++|+-. .-.+++++.+|+..||+++|+| .|..|+|+++|++|+||-..
T Consensus 175 k~~~~~~dddW~c~~tl~g~~~TVW~~~F~~-~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 175 KVYRDEDDDDWECVQTLDGHENTVWSLAFDN-IGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred EEEeecCCCCeeEEEEecCccceEEEEEecC-CCceEEEecCCcceEeeeec
Confidence 999766 2378999999999999999997 89999999999999999854
No 419
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.84 E-value=1.3e-19 Score=201.72 Aligned_cols=195 Identities=18% Similarity=0.270 Sum_probs=162.8
Q ss_pred CCcccccccCCCCCCCCccccCCC-------C---CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCC
Q 005147 494 RPLVRHSQLSSDGRTSKPLVNERS-------S---INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG 562 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~~~~~-------~---~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~ 562 (712)
...+.++.|++||+.++....++. . .....+.||...+..+.| +.++...+...++..++ |++...
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~f---s~d~~~l~s~s~D~tiriwd~~~~ 235 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAF---SPDGSYLLSGSDDKTLRIWDLKDD 235 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEE---CCCCcEEEEecCCceEEEeeccCC
Confidence 567888999999997633322211 1 235566899999999999 67776777777777776 999432
Q ss_pred -c----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 563 -D----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 563 -~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
. +.+|...|++++|+|+++++++|+.|++|+|||+++ ..+.....+|...|++++|++ ++++|++++
T Consensus 236 ~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~-------~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s 307 (456)
T KOG0266|consen 236 GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT-------GECVRKLKGHSDGISGLAFSP-DGNLLVSAS 307 (456)
T ss_pred CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC-------CeEEEeeeccCCceEEEEECC-CCCEEEEcC
Confidence 3 448999999999999999999999999999999976 234456778999999999999 699999999
Q ss_pred CCCcEEEEECCCCc--EEEEeccCCCc--EEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQ--VLTEMREHERR--VWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~--~~~~~~~H~~~--v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+||.|+|||+.++. ++.++.+++.. +++++|+| ++.++++++.|+.+++||++.+.++..+-
T Consensus 308 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp-~~~~ll~~~~d~~~~~w~l~~~~~~~~~~ 373 (456)
T KOG0266|consen 308 YDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSP-NGKYLLSASLDRTLKLWDLRSGKSVGTYT 373 (456)
T ss_pred CCccEEEEECCCCceeeeecccCCCCCCceeEEEECC-CCcEEEEecCCCeEEEEEccCCcceeeec
Confidence 99999999999999 77888888766 99999998 99999999999999999999988876654
No 420
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.83 E-value=5e-20 Score=183.70 Aligned_cols=167 Identities=17% Similarity=0.233 Sum_probs=142.1
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+.||.+.|..++. .|. +...+..+.|....+||+.+|.+. ||-..|..+++++-..|+++||.|+.||+||+.
T Consensus 146 Vi~gHlgWVr~vav-dP~-n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 146 VISGHLGWVRSVAV-DPG-NEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred hhhhccceEEEEee-CCC-ceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEech
Confidence 56799999998887 565 334445555666666999888754 799999999999999999999999999999996
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
. . .......+|-+.|.|++.+| +-+.|+||+.|.+++|||+|+...+.++.+|..+|.+|.+.|.|++ ++|
T Consensus 224 ~-----n--kvIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpq-vit 294 (460)
T KOG0285|consen 224 Y-----N--KVIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQ-VIT 294 (460)
T ss_pred h-----h--hhHHHhccccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCc-eEE
Confidence 4 1 12234568999999999999 6899999999999999999999999999999999999999997766 789
Q ss_pred EECCCcEEEEeCCCCcEEEEEe
Q 005147 679 GSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 679 gs~D~~v~lWd~~~~~~v~~~~ 700 (712)
||.|++|++||++.|+...++.
T Consensus 295 ~S~D~tvrlWDl~agkt~~tlt 316 (460)
T KOG0285|consen 295 GSHDSTVRLWDLRAGKTMITLT 316 (460)
T ss_pred ecCCceEEEeeeccCceeEeee
Confidence 9999999999999999886654
No 421
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.83 E-value=6.8e-21 Score=198.25 Aligned_cols=221 Identities=15% Similarity=0.148 Sum_probs=150.8
Q ss_pred ccccccccCCCCC-cceeeeccceeeccCCCCCcccccccccccccc-cCceEEEEee-CCccHHHhhcCCCCCCChhHH
Q 005147 8 GERFGVRGDDSND-FELRKHSDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYEC 84 (712)
Q Consensus 8 ~~~~~~~~~~~~~-~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~~-~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~ 84 (712)
++-++|+--.-++ ..|..|++..-+-.+.|+||+.+++ +-+...+ .-.+.+++++ ..|+|.+||+.+- +++.+.
T Consensus 233 ~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~-~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt--isw~~~ 309 (534)
T KOG3653|consen 233 NRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIG-AEKRGTADRMEYWLVTEFHPKGSLCDYLKANT--ISWNSL 309 (534)
T ss_pred CceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhc-hhccCCccccceeEEeeeccCCcHHHHHHhcc--ccHHHH
Confidence 3444444444333 3356777777788899999999888 3322221 2246666666 7999999996544 899999
Q ss_pred HHHHHHHHHHHHHhhh---------cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCC
Q 005147 85 LHIFRQIVEIVYAAHS---------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (712)
Q Consensus 85 ~~i~~qil~~l~~lHs---------~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (712)
.+|+..+++||+|||+ ..|+|||||..|||+..++..-|+|||++-.+......
T Consensus 310 cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~----------------- 372 (534)
T KOG3653|consen 310 CRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ----------------- 372 (534)
T ss_pred HHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC-----------------
Confidence 9999999999999997 36999999999999999999999999998544211000
Q ss_pred CchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccC
Q 005147 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (712)
Q Consensus 156 ~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt 235 (712)
+ .....+||
T Consensus 373 -------------~----------------------------------------------------------d~~~qVGT 381 (534)
T KOG3653|consen 373 -------------G----------------------------------------------------------DTHGQVGT 381 (534)
T ss_pred -------------c----------------------------------------------------------chhhhhhh
Confidence 0 01116899
Q ss_pred ccccCcccccCCC-C-----CCccchHHHHHHHHHhhC---------------CCCC---ChhhHHHHHhh--cccCCC-
Q 005147 236 NWYASPEELAGAP-V-----SCASDIYRLGVLLFELFC---------------PFST---GEEKTRTMSSL--RHRVLP- 288 (712)
Q Consensus 236 ~~Y~aPE~~~~~~-~-----~~~sDIwSlGvll~eLl~---------------pf~~---~~~~~~~~~~~--~~~~~~- 288 (712)
..|||||++.+.. . -.+.||||+|.+||||++ ||.. .......|+.+ ++...|
T Consensus 382 ~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~ 461 (534)
T KOG3653|consen 382 RRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPK 461 (534)
T ss_pred hhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCC
Confidence 9999999996653 2 247999999999999997 1110 01112222221 222222
Q ss_pred -chhhhcCch---hHHHHHHcCCCCCCCCCCHHHH
Q 005147 289 -PQLLLKFPK---EASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 289 -~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~ei 319 (712)
+..+...+. ..+.+..||..||+.|.|+.-+
T Consensus 462 ~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 462 IPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred ChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 122222222 2388899999999999997654
No 422
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.83 E-value=2.4e-19 Score=171.22 Aligned_cols=202 Identities=16% Similarity=0.214 Sum_probs=162.0
Q ss_pred CCCcccccccCCCCCCCCcc---------ccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCC
Q 005147 493 GRPLVRHSQLSSDGRTSKPL---------VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG 562 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~ 562 (712)
..++|......||+..++.. ....+..|.+++.||+..|..+.| -.+|.-.+++.+++.++ ||++..
T Consensus 39 ~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF---~~dgrWMyTgseDgt~kIWdlR~~ 115 (311)
T KOG0315|consen 39 PDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGF---QCDGRWMYTGSEDGTVKIWDLRSL 115 (311)
T ss_pred CccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEE---eecCeEEEecCCCceEEEEeccCc
Confidence 34566666677777766332 223344589999999999999888 68888888888888877 999874
Q ss_pred ce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc----------------------------------
Q 005147 563 DL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR---------------------------------- 605 (712)
Q Consensus 563 ~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~---------------------------------- 605 (712)
.+ ..|.++|++|..+|...-|++|..+|.|++||+..-.+.+.
T Consensus 116 ~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~ 195 (311)
T KOG0315|consen 116 SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWR 195 (311)
T ss_pred ccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEE
Confidence 43 36889999999999888899999999999999986211110
Q ss_pred -------ccccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 606 -------DIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 606 -------~~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
....|+ ...+|...+..+.++| +..+||++|.|.+|+||...+- +.-.++++|..++|.++|| .|+.+|
T Consensus 196 l~~~~~~s~l~P~~k~~ah~~~il~C~lSP-d~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS-~dg~Yl 273 (311)
T KOG0315|consen 196 LLNHQTASELEPVHKFQAHNGHILRCLLSP-DVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFS-ADGEYL 273 (311)
T ss_pred ccCCCccccceEhhheecccceEEEEEECC-CCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeec-cCccEE
Confidence 000111 2346888899999999 6999999999999999999887 6677889999999999999 599999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEE
Q 005147 677 ASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|||.|+.+++||+..++.+...
T Consensus 274 vTassd~~~rlW~~~~~k~v~qy 296 (311)
T KOG0315|consen 274 VTASSDHTARLWDLSAGKEVRQY 296 (311)
T ss_pred EecCCCCceeecccccCceeeec
Confidence 99999999999999999988654
No 423
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.83 E-value=3.5e-21 Score=210.86 Aligned_cols=201 Identities=15% Similarity=0.135 Sum_probs=155.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..+++.++|||+++|++ ++.... +.|+.++ ++|+|.++++.....+-....+.|..||++|+.|||.+++||
T Consensus 747 deAl~masldHpnl~RLLg-vc~~s~----~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVH 821 (1177)
T KOG1025|consen 747 DEALRMASLDHPNLLRLLG-VCMLST----LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVH 821 (1177)
T ss_pred HHHHHHhcCCCchHHHHhh-hcccch----HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 4556789999999999999 664332 4555555 799999999777777999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||-..|+|+...++||+.|||+++....++.+..
T Consensus 822 rdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~--------------------------------------------- 856 (1177)
T KOG1025|consen 822 RDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS--------------------------------------------- 856 (1177)
T ss_pred hhhhhhheeecCCCeEEEEecchhhccCccccccc---------------------------------------------
Confidence 99999999999999999999999976554432210
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.+. ..-.+-|||-|.++...|+.++||||+||++|||
T Consensus 857 -----------------------~~~--------------------gK~pikwmale~i~~~~~thqSDVWsfGVtiWEl 893 (1177)
T KOG1025|consen 857 -----------------------APG--------------------GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL 893 (1177)
T ss_pred -----------------------ccc--------------------cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence 000 0114458999999999999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+| |++..... ..-..+..+..-++.+...-+..-++.+||..|+..||+++++..
T Consensus 894 mTFGa~Py~gi~~~-eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 894 MTFGAKPYDGIPAE-EIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HhcCCCccCCCCHH-HhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 99 77654332 333334444333343444455667899999999999999988755
No 424
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.83 E-value=1.2e-20 Score=191.59 Aligned_cols=205 Identities=21% Similarity=0.249 Sum_probs=155.0
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc-----C--CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-----K--PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~-----~--~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
..+...|-...|||+..+.+ ++. +....+++++...+-++|..+|. + ..+.++-.+...++.||..|++||
T Consensus 335 L~es~lly~~sH~nll~V~~-V~i-e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl 412 (563)
T KOG1024|consen 335 LQESMLLYGASHPNLLSVLG-VSI-EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL 412 (563)
T ss_pred HHHHHHHhcCcCCCccceeE-EEe-eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH
Confidence 34555677788999999998 443 34556888887778899999995 2 234577788889999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|..||||.||-..|.+|+..-+||++|..++++.=.. |+
T Consensus 413 h~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~----------------------------------DY------- 451 (563)
T KOG1024|consen 413 HNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPG----------------------------------DY------- 451 (563)
T ss_pred HhcCcccchhhhhcceehhheeEEeccchhccccCcc----------------------------------cc-------
Confidence 9999999999999999999999999999999764111 11
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.| +-|. . -...-|||||.+....|+.++|+|||
T Consensus 452 ------hc---------------------LGDn-----------E---------nRPvkWMslEal~n~~yssasDvWsf 484 (563)
T KOG1024|consen 452 ------HC---------------------LGDN-----------E---------NRPVKWMSLEALQNSHYSSASDVWSF 484 (563)
T ss_pred ------cc---------------------cCCC-----------C---------CCcccccCHHHHhhhhhcchhhhHHH
Confidence 01 0000 0 01345899999999999999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||+||||+| ||..-+ ..+....+..+..-.+..+...+...++.-||...|++||+.+|+..
T Consensus 485 GVllWELmtlg~~PyaeID-PfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 485 GVLLWELMTLGKLPYAEID-PFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHHHhcCCCCccccC-HHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 999999998 664333 33445555555444444444444558999999999999999999865
No 425
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.82 E-value=3.7e-20 Score=182.80 Aligned_cols=173 Identities=27% Similarity=0.335 Sum_probs=138.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...+..+.|++++.+++ .+.. ....++++++ .|++|.+++......++...+..++.+++.+|.+||++|++|
T Consensus 40 ~e~~~~~~l~~~~i~~~~~-~~~~---~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H 115 (215)
T cd00180 40 REIEILKKLNHPNIVKLYG-VFED---ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIH 115 (215)
T ss_pred HHHHHHHhcCCCCeeeEee-eeec---CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3344677788999999887 3322 2456777777 469999999654345899999999999999999999999999
Q ss_pred ccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 106 HNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 106 rDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
+||+|.||+++. .+.++++||+.+........
T Consensus 116 ~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~----------------------------------------------- 148 (215)
T cd00180 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKS----------------------------------------------- 148 (215)
T ss_pred cCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-----------------------------------------------
Confidence 999999999998 89999999998743211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~ 263 (712)
......+...|++||.+... .++.++|+|+||++++
T Consensus 149 -------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~ 185 (215)
T cd00180 149 -------------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILY 185 (215)
T ss_pred -------------------------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHH
Confidence 00013457789999999877 7899999999999999
Q ss_pred HhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCc
Q 005147 264 ELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSE 323 (712)
Q Consensus 264 eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp 323 (712)
+| ....+++.+|+..+|.+||++.+++.|+
T Consensus 186 ~l------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 186 EL------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HH------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 99 4455899999999999999999999874
No 426
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.82 E-value=1.5e-19 Score=181.91 Aligned_cols=191 Identities=17% Similarity=0.289 Sum_probs=159.7
Q ss_pred CCCCcccccccCCCCCCC---------Ccccc--------CC----------------CCCCceeeccCCCccceecccC
Q 005147 492 SGRPLVRHSQLSSDGRTS---------KPLVN--------ER----------------SSINNLGSKEGYSEGRRSGWIN 538 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~---------~~~~~--------~~----------------~~~~~~~l~gh~~~~~~~~~~~ 538 (712)
||+..|.|+...+||... .+++. |. --.|.+.|.||..+|..+.| +
T Consensus 191 GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w-~ 269 (423)
T KOG0313|consen 191 GHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW-S 269 (423)
T ss_pred ccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEE-c
Confidence 899999999988888732 12220 00 13699999999999999999 3
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceec---CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~ 615 (712)
+ .+.+...++|.....||+.++.+.. .....+||+.+|...+||+||.|..|++||.+++. .-.......+
T Consensus 270 d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~----gs~v~~s~~g 343 (423)
T KOG0313|consen 270 D--ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD----GSVVSQSLIG 343 (423)
T ss_pred C--CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCC----CceeEEeeec
Confidence 3 5566677788888889999887653 46788999999999999999999999999998741 1122345779
Q ss_pred CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc-EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 616 ~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~-~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|++.|++|.|+|.+..+|++|++|+++++||+|+.+ ++.++.+|.+.|.+++|+ ++.+++|||.|++|+|+...
T Consensus 344 H~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~--~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 344 HKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN--EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred chhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc--CCceEEeccCcceEEEeccc
Confidence 999999999999988999999999999999999887 999999999999999998 78999999999999998654
No 427
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.82 E-value=1.7e-19 Score=176.61 Aligned_cols=193 Identities=16% Similarity=0.226 Sum_probs=163.4
Q ss_pred CCCCCCCcccccccCCCCCCCCcc---------ccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPL---------VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-AD 558 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~d 558 (712)
.+++|++.+....|.|||...+.. .....+..-..++||+++|-++.| ..|+...+....+.++. ||
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~---~~d~s~i~S~gtDk~v~~wD 118 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHG---MRDGSHILSCGTDKTVRGWD 118 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeee---ccCCCEEEEecCCceEEEEe
Confidence 468999999999999999965443 223446667899999999999999 67887777777777776 99
Q ss_pred ccCCcee----cCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEE
Q 005147 559 LNQGDLL----NSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 633 (712)
Q Consensus 559 l~~~~~~----~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l 633 (712)
.++|+.. +|.+-|+++.-++- ..++.||+.|+++||||+|+ ..++.....+-.++++.|+. ++..+
T Consensus 119 ~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~--------k~~~~t~~~kyqltAv~f~d-~s~qv 189 (338)
T KOG0265|consen 119 AETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK--------KEAIKTFENKYQLTAVGFKD-TSDQV 189 (338)
T ss_pred cccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecc--------cchhhccccceeEEEEEecc-cccce
Confidence 9998865 68899999885553 45889999999999999985 22344455677899999996 69999
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 634 asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
.+|+-|+.|++||++....+.++.+|.++|+.+..+| +|.++.|-|-|+++++||++-..
T Consensus 190 ~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~-~gs~llsnsMd~tvrvwd~rp~~ 249 (338)
T KOG0265|consen 190 ISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSR-YGSFLLSNSMDNTVRVWDVRPFA 249 (338)
T ss_pred eeccccCceeeeccccCcceEEeecccCceeeEEecc-CCCccccccccceEEEEEecccC
Confidence 9999999999999999999999999999999999997 99999999999999999997533
No 428
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.81 E-value=5.4e-19 Score=171.58 Aligned_cols=168 Identities=15% Similarity=0.188 Sum_probs=136.6
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc---------eecCCCCeeEEEEcCCCCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD---------LLNSSNLVCSLSFDRDGELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~---------~~~h~~~V~~i~f~~~~~~lat~~~d~~I 592 (712)
-+|+||++.|.++.. .+....++..++.++..+.|++...+ +.||+..|.++..++||++++++|.|+++
T Consensus 9 ~tl~gh~d~Vt~la~-~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~l 87 (315)
T KOG0279|consen 9 GTLEGHTDWVTALAI-KIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTL 87 (315)
T ss_pred eeecCCCceEEEEEe-ecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceE
Confidence 478899999988887 34455566666666666778885322 45899999999999999999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC--CCcEEEEEEec
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH--ERRVWSIDFSS 670 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H--~~~v~sv~fsp 670 (712)
++||+.++ .......+|...|.+|+|+| +...++||+.|.+|++|++-.. +..+..++ .++|.||.|+|
T Consensus 88 rlWDl~~g-------~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP 158 (315)
T KOG0279|consen 88 RLWDLATG-------ESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSP 158 (315)
T ss_pred EEEEecCC-------cEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcC
Confidence 99999763 33456779999999999999 6899999999999999998754 44455444 78999999999
Q ss_pred CC-CCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 671 AD-PTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 671 ~~-~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.. ..+|+++|.|++||+||+++-+....+
T Consensus 159 ~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~ 188 (315)
T KOG0279|consen 159 NESNPIIVSASWDKTVKVWNLRNCQLRTTF 188 (315)
T ss_pred CCCCcEEEEccCCceEEEEccCCcchhhcc
Confidence 53 679999999999999999976554433
No 429
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.81 E-value=1e-18 Score=194.57 Aligned_cols=157 Identities=18% Similarity=0.326 Sum_probs=128.5
Q ss_pred CCccceecccCCCCCCcEEEE-EcCCcEEEEEcc------CCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCc
Q 005147 528 YSEGRRSGWINPFLEGLCKYL-SFSKLRVKADLN------QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 600 (712)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~dl~------~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~ 600 (712)
...+..+.+ +.+|...+. +.+.....|... ...+.+|...|.+++|+|++.++++|+.|++|+|||+..
T Consensus 159 ~~sv~~~~f---s~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~- 234 (456)
T KOG0266|consen 159 CPSVTCVDF---SPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKD- 234 (456)
T ss_pred cCceEEEEE---cCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccC-
Confidence 344445555 344443233 333334447763 333458999999999999999999999999999999932
Q ss_pred cccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE
Q 005147 601 INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs 680 (712)
......+..+|...|++++|+|. ++.+++|++|++|+|||+++++++..+.+|.+.|++++|++ ++++|+++|
T Consensus 235 -----~~~~~~~l~gH~~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s 307 (456)
T KOG0266|consen 235 -----DGRNLKTLKGHSTYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP-DGNLLVSAS 307 (456)
T ss_pred -----CCeEEEEecCCCCceEEEEecCC-CCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC-CCCEEEEcC
Confidence 12344567799999999999995 69999999999999999999999999999999999999997 999999999
Q ss_pred CCCcEEEEeCCCCcE
Q 005147 681 DDGSVKLWSINQAIL 695 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~ 695 (712)
.|+.|+|||+.++..
T Consensus 308 ~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 308 YDGTIRVWDLETGSK 322 (456)
T ss_pred CCccEEEEECCCCce
Confidence 999999999999984
No 430
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.80 E-value=9.9e-19 Score=175.23 Aligned_cols=186 Identities=14% Similarity=0.222 Sum_probs=151.8
Q ss_pred hhHhHHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcC
Q 005147 472 KNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFS 551 (712)
Q Consensus 472 ~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~ 551 (712)
.++=+++++|-..|. ..+|.--|.++.|-|-|..+ ++.+.|..++.|..+
T Consensus 174 ~~LWd~~~~~~c~ks---~~gh~h~vS~V~f~P~gd~i---------------------------lS~srD~tik~We~~ 223 (406)
T KOG0295|consen 174 AKLWDFDTFFRCIKS---LIGHEHGVSSVFFLPLGDHI---------------------------LSCSRDNTIKAWECD 223 (406)
T ss_pred hhheeHHHHHHHHHH---hcCcccceeeEEEEecCCee---------------------------eecccccceeEEecc
Confidence 666777887554443 44555556677776665544 677888888888877
Q ss_pred CcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC--
Q 005147 552 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-- 629 (712)
Q Consensus 552 ~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-- 629 (712)
++-.+..+ .+|..+|..+..+.||.+||+||.|.+|++|-+.+. .+......|.-+|-|++|-|..
T Consensus 224 tg~cv~t~-----~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~-------~~k~~lR~hEh~vEci~wap~~~~ 291 (406)
T KOG0295|consen 224 TGYCVKTF-----PGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATK-------QCKAELREHEHPVECIAWAPESSY 291 (406)
T ss_pred cceeEEec-----cCchHhEEEEEecCCeeEEEecCCCceEEEEEeccc-------hhhhhhhccccceEEEEecccccC
Confidence 77655444 468999999999999999999999999999999763 2234445677788899887742
Q ss_pred -------C-----CEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 630 -------K-----SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 630 -------~-----~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+ .++++++.|++|++||+.+|.|+.++.+|..+|.+++|+| .|++|+|+.+|+++++||++++.+..
T Consensus 292 ~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk 370 (406)
T KOG0295|consen 292 PSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMK 370 (406)
T ss_pred cchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeee
Confidence 2 4999999999999999999999999999999999999998 89999999999999999999999987
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
++.
T Consensus 371 ~~~ 373 (406)
T KOG0295|consen 371 TLE 373 (406)
T ss_pred ccC
Confidence 765
No 431
>PTZ00421 coronin; Provisional
Probab=99.80 E-value=3.5e-18 Score=190.05 Aligned_cols=167 Identities=13% Similarity=0.140 Sum_probs=133.6
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC-----------ceecCCCCeeEEEEcCCC-CEEEEEeCC
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-----------DLLNSSNLVCSLSFDRDG-ELFAAAGVN 589 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~-----------~~~~h~~~V~~i~f~~~~-~~lat~~~d 589 (712)
..+.||.+.|..+.| +++.+..+..++.+....+|++..+ .+.+|...|.+++|+|++ ++|++|+.|
T Consensus 69 ~~l~GH~~~V~~v~f-sP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D 147 (493)
T PTZ00421 69 PILLGQEGPIIDVAF-NPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD 147 (493)
T ss_pred ceEeCCCCCEEEEEE-cCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC
Confidence 457899999999999 7766666666666555556998754 245799999999999975 699999999
Q ss_pred CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCc-EEEEEE
Q 005147 590 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERR-VWSIDF 668 (712)
Q Consensus 590 ~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~-v~sv~f 668 (712)
++|+|||+.++. .......|...|.+++|+| ++.+|++|+.||+|+|||+++++.+.++.+|.+. +..+.|
T Consensus 148 gtVrIWDl~tg~-------~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w 219 (493)
T PTZ00421 148 MVVNVWDVERGK-------AVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLW 219 (493)
T ss_pred CEEEEEECCCCe-------EEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEE
Confidence 999999997631 2223446888999999999 6999999999999999999999999999999875 446788
Q ss_pred ecCCCCEEEEEE----CCCcEEEEeCCCCcEEEE
Q 005147 669 SSADPTLLASGS----DDGSVKLWSINQAILLLH 698 (712)
Q Consensus 669 sp~~~~~l~sgs----~D~~v~lWd~~~~~~v~~ 698 (712)
+| ++..+++++ .|+.|++||+++......
T Consensus 220 ~~-~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~ 252 (493)
T PTZ00421 220 AK-RKDLIITLGCSKSQQRQIMLWDTRKMASPYS 252 (493)
T ss_pred cC-CCCeEEEEecCCCCCCeEEEEeCCCCCCcee
Confidence 87 556666554 489999999997654333
No 432
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.80 E-value=1.3e-19 Score=183.67 Aligned_cols=201 Identities=16% Similarity=0.130 Sum_probs=162.7
Q ss_pred CCCCCCcccccccCCCCCCCCccccC-------CCCCCceeeccCC-CccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE-------RSSINNLGSKEGY-SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~l~gh~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
+..|++.|++..||.+|..+...+.. ..........+|. ..|..++| ++ .|.....++.+....+||...
T Consensus 134 lQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlaf-Sp-nDskF~t~SdDg~ikiWdf~~ 211 (464)
T KOG0284|consen 134 LQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAF-SP-NDSKFLTCSDDGTIKIWDFRM 211 (464)
T ss_pred hhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheecc-CC-CCceeEEecCCCeEEEEeccC
Confidence 34688999999999999976222211 1222233444555 88999998 66 555555555555555599875
Q ss_pred Cc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
.+ +.||..-|.+++|+|...++|+||.|..||+||.+++. +..+...|+..|..+.|+| ++++|+|+|
T Consensus 212 ~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~-------cl~tlh~HKntVl~~~f~~-n~N~Llt~s 283 (464)
T KOG0284|consen 212 PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS-------CLATLHGHKNTVLAVKFNP-NGNWLLTGS 283 (464)
T ss_pred CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcc-------hhhhhhhccceEEEEEEcC-CCCeeEEcc
Confidence 44 57999999999999999999999999999999998753 4456678999999999999 589999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|..++++|+|+.+.++++.+|++.|+++.|+|....+|++|+.||.|..|.+-..+++..+-
T Consensus 284 kD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~ 346 (464)
T KOG0284|consen 284 KDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIP 346 (464)
T ss_pred CCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999998656654443
No 433
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.79 E-value=7.1e-19 Score=178.44 Aligned_cols=199 Identities=21% Similarity=0.290 Sum_probs=148.5
Q ss_pred CCCCCcccccccCCCCCCCCccccCCC-----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEc
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERS-----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl 559 (712)
..|..-|--..||+||+++|..+.+.. ..-..++.||..+|.-+.| +| .|..+..+..+....+||.
T Consensus 221 ~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~w-SP-DdryLlaCg~~e~~~lwDv 298 (519)
T KOG0293|consen 221 QDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMW-SP-DDRYLLACGFDEVLSLWDV 298 (519)
T ss_pred hhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEE-CC-CCCeEEecCchHheeeccC
Confidence 355666777889999999976655442 1113467899999999999 44 3334444455555556999
Q ss_pred cCCcee-----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc---------------ccccceE-------
Q 005147 560 NQGDLL-----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR---------------DIHYPVV------- 612 (712)
Q Consensus 560 ~~~~~~-----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~---------------~~~~~~~------- 612 (712)
.+|++. +|...+.+++|.|||..|++|+-|++|..||++......- ++.+.+.
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i 378 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKI 378 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccce
Confidence 999876 3458899999999999999999999999999875211100 0000000
Q ss_pred ------------EecCCCCeEEEEEcCC--------------------------------------------CCCEEEEE
Q 005147 613 ------------EMASRSKLSSICWNSY--------------------------------------------IKSQIASS 636 (712)
Q Consensus 613 ------------~~~~~~~v~~v~~~p~--------------------------------------------~~~~lasg 636 (712)
......+|++++.+.. +..++|||
T Consensus 379 ~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSG 458 (519)
T KOG0293|consen 379 RLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASG 458 (519)
T ss_pred eeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEec
Confidence 0112244555544432 24699999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|.|+.|.||+-.+|+++.++.||.+.|+||+|+|.++.++||||+||+|+||...
T Consensus 459 SED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 459 SEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred CCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999875
No 434
>PTZ00420 coronin; Provisional
Probab=99.79 E-value=1e-17 Score=187.37 Aligned_cols=169 Identities=12% Similarity=0.161 Sum_probs=133.7
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC------------ceecCCCCeeEEEEcCCCCE-EEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG------------DLLNSSNLVCSLSFDRDGEL-FAA 585 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~------------~~~~h~~~V~~i~f~~~~~~-lat 585 (712)
.+...++||.+.|..++| +++.+.++...+.+....+|++.++ .+.+|...|.+++|+|++.. |+|
T Consensus 65 ~~v~~L~gH~~~V~~laf-sP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaS 143 (568)
T PTZ00420 65 PPVIKLKGHTSSILDLQF-NPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCS 143 (568)
T ss_pred ceEEEEcCCCCCEEEEEE-cCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEE
Confidence 356789999999999999 7765666666665555555999753 23579999999999998874 679
Q ss_pred EeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEE-
Q 005147 586 AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVW- 664 (712)
Q Consensus 586 ~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~- 664 (712)
||.|++|+|||++++. ......+...|.+++|+| ++.+|++++.|+.|+|||+++++.+.++.+|.+.+.
T Consensus 144 gS~DgtIrIWDl~tg~--------~~~~i~~~~~V~Slswsp-dG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s 214 (568)
T PTZ00420 144 SGFDSFVNIWDIENEK--------RAFQINMPKKLSSLKWNI-KGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNT 214 (568)
T ss_pred EeCCCeEEEEECCCCc--------EEEEEecCCcEEEEEECC-CCCEEEEEecCCEEEEEECCCCcEEEEEecccCCcee
Confidence 9999999999997632 122334667899999999 699999999999999999999999999999987643
Q ss_pred ----EEEEecCCCCEEEEEECCC----cEEEEeCCC-CcEEEE
Q 005147 665 ----SIDFSSADPTLLASGSDDG----SVKLWSINQ-AILLLH 698 (712)
Q Consensus 665 ----sv~fsp~~~~~l~sgs~D~----~v~lWd~~~-~~~v~~ 698 (712)
...|++ ++.+|+|+|.|+ .|+|||+++ +.++..
T Consensus 215 ~~v~~~~fs~-d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~ 256 (568)
T PTZ00420 215 KNIWIDGLGG-DDNYILSTGFSKNNMREMKLWDLKNTTSALVT 256 (568)
T ss_pred EEEEeeeEcC-CCCEEEEEEcCCCCccEEEEEECCCCCCceEE
Confidence 345566 788888888764 799999995 555544
No 435
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=4.5e-19 Score=187.89 Aligned_cols=152 Identities=18% Similarity=0.289 Sum_probs=128.4
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~ 615 (712)
++++.|-++++|+++..=. . ...+.||+..|.+|+|.| |.+.||+|+.|++||||.+.. .++..+..+
T Consensus 113 LtsSDDm~iKlW~we~~wa---~-~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs-------~~~nfTl~g 181 (794)
T KOG0276|consen 113 LTSSDDMTIKLWDWENEWA---C-EQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGS-------PHPNFTLEG 181 (794)
T ss_pred EecCCccEEEEeeccCcee---e-eeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCC-------CCCceeeec
Confidence 5666777777777665321 1 234678999999999999 778999999999999999954 345567779
Q ss_pred CCCCeEEEEEcCC-CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 616 SRSKLSSICWNSY-IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 616 ~~~~v~~v~~~p~-~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|...|+||++-+. ++.+|+||+.|.+|+|||..+.+|++++++|+..|..+.|+| .-.+++|||.||+|+||+..+.+
T Consensus 182 HekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp-~lpiiisgsEDGTvriWhs~Ty~ 260 (794)
T KOG0276|consen 182 HEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHP-ELPIIISGSEDGTVRIWNSKTYK 260 (794)
T ss_pred cccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecC-CCcEEEEecCCccEEEecCccee
Confidence 9999999999662 356999999999999999999999999999999999999998 78999999999999999998876
Q ss_pred EEEEEe
Q 005147 695 LLLHLV 700 (712)
Q Consensus 695 ~v~~~~ 700 (712)
...++.
T Consensus 261 lE~tLn 266 (794)
T KOG0276|consen 261 LEKTLN 266 (794)
T ss_pred hhhhhh
Confidence 655443
No 436
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=9.2e-20 Score=206.78 Aligned_cols=213 Identities=16% Similarity=0.173 Sum_probs=151.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..+-..+.|+|++..+.-+++ ... .+.. ||++..+|..++...+ .+...++..+++||+.||+|+|+.||.||
T Consensus 370 sE~~i~~~l~h~~~~e~l~~~~~-~~~--~~~~-mE~~~~Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h~~Giahr 444 (601)
T KOG0590|consen 370 SEFCIGSSLSHPNIIETLDIVQE-IDG--ILQS-MEYCPYDLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLHSMGLAHR 444 (601)
T ss_pred hheeecccccCCchhhhHHHHhh-ccc--chhh-hhcccHHHHHHHhccc-ccchhhhhHHHHHHHHHHHHHHhcCceec
Confidence 55556677999998776663332 111 1222 6775449999885443 48999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|+++...|.+|++|||.+..+--+
T Consensus 445 dlK~enll~~~~g~lki~Dfg~~~vf~~~--------------------------------------------------- 473 (601)
T KOG0590|consen 445 DLKLENLLVTENGILKIIDFGAASVFRYP--------------------------------------------------- 473 (601)
T ss_pred cCccccEEEecCCceEEeecCcceeeccC---------------------------------------------------
Confidence 99999999999999999999988432111
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC-CccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~sDIwSlGvll~eL 265 (712)
.+..-. .....+|+..|+|||++.+..|. ...||||.|++++.|
T Consensus 474 ----------------~e~~~~-------------------~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m 518 (601)
T KOG0590|consen 474 ----------------WEKNIH-------------------ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICM 518 (601)
T ss_pred ----------------cchhhh-------------------hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEE
Confidence 000000 01126789999999999999986 489999999999999
Q ss_pred hCCCCCCh---hhHH---HHHhhcc---cCCCchhhhcCchhH-HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FCPFSTGE---EKTR---TMSSLRH---RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~pf~~~~---~~~~---~~~~~~~---~~~~~~~~~~~~~~~-~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.++-+++. .... .+....+ ..-+..++...|... .+|.+||+.+|.+|.|+++|++.+||+....
T Consensus 519 ~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 519 ILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred ecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 98322221 1111 1111111 112233444555554 8999999999999999999999999997643
No 437
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.78 E-value=2.8e-18 Score=176.99 Aligned_cols=169 Identities=16% Similarity=0.246 Sum_probs=147.1
Q ss_pred CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC--c----eecCCCCeeEEEEcC-CCCEEEEEeC
Q 005147 516 RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG--D----LLNSSNLVCSLSFDR-DGELFAAAGV 588 (712)
Q Consensus 516 ~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~--~----~~~h~~~V~~i~f~~-~~~~lat~~~ 588 (712)
+...|...+.||++.|..+.| .++.+.+....+.+..-.+||++++ + ..+|.+.|.|++|+| ++.+|||||.
T Consensus 215 ~~~~p~~~~~~h~~~VeDV~~-h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~ 293 (422)
T KOG0264|consen 215 KVVDPKTIFSGHEDVVEDVAW-HPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSA 293 (422)
T ss_pred ccccceEEeecCCcceehhhc-cccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccC
Confidence 456788999999999999999 8999999888777777777999952 2 236899999999999 5568999999
Q ss_pred CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC--------------cEEE
Q 005147 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS--------------QVLT 654 (712)
Q Consensus 589 d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~--------------~~~~ 654 (712)
|++|++||+|... .++....+|...|.+|.|+|...++|||++.|+.+.+||+..- ..++
T Consensus 294 D~tV~LwDlRnL~------~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF 367 (422)
T KOG0264|consen 294 DKTVALWDLRNLN------KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLF 367 (422)
T ss_pred CCcEEEeechhcc------cCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeE
Confidence 9999999998632 3566788999999999999998999999999999999999641 2467
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 655 EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 655 ~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
+--||+..|..++|+|.++..++|.++|+.+.||...
T Consensus 368 ~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 368 IHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred EecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 7789999999999999999999999999999999976
No 438
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.78 E-value=4.1e-18 Score=170.18 Aligned_cols=199 Identities=15% Similarity=0.206 Sum_probs=156.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
..+|..-|+|+.+-|..++.+..+-++- ..-.++|.||-..+.++.+ + .-....+..+.+..|+ |||.
T Consensus 147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vav-S--~rHpYlFs~gedk~VKCwDLe 223 (460)
T KOG0285|consen 147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAV-S--KRHPYLFSAGEDKQVKCWDLE 223 (460)
T ss_pred hhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeee-c--ccCceEEEecCCCeeEEEech
Confidence 4588888999999887666544443331 2345788899999999988 3 3334446666666655 9999
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
..+++ ||-+.|.|++.+|.-+.|+|||.|.+|+|||+++- .......+|+.+|.+|.+.|. ...++||
T Consensus 224 ~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr-------~~V~~l~GH~~~V~~V~~~~~-dpqvit~ 295 (460)
T KOG0285|consen 224 YNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR-------ASVHVLSGHTNPVASVMCQPT-DPQVITG 295 (460)
T ss_pred hhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeeccc-------ceEEEecCCCCcceeEEeecC-CCceEEe
Confidence 87755 78999999999999999999999999999999872 223456689999999999984 6789999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC---------------------------------------CCCEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA---------------------------------------DPTLLA 677 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~---------------------------------------~~~~l~ 677 (712)
|.|++|++||++.|+...++..|...|.+++.+|. ...+++
T Consensus 296 S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~ 375 (460)
T KOG0285|consen 296 SHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLV 375 (460)
T ss_pred cCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeeccCceEE
Confidence 99999999999999998898888888888888871 234677
Q ss_pred EEECCCcEEEEeCCCCcEEEEE
Q 005147 678 SGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|++.|.+..||.++|......
T Consensus 376 ~G~dng~~~fwdwksg~nyQ~~ 397 (460)
T KOG0285|consen 376 SGGDNGSIMFWDWKSGHNYQRG 397 (460)
T ss_pred EcCCceEEEEEecCcCcccccc
Confidence 7888888888888877665443
No 439
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.78 E-value=2.1e-18 Score=186.46 Aligned_cols=174 Identities=20% Similarity=0.251 Sum_probs=139.2
Q ss_pred eeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEccCCc--------eecCCCCeeEEEEcCCC-CEEEEEeCCCc
Q 005147 522 LGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLNQGD--------LLNSSNLVCSLSFDRDG-ELFAAAGVNKK 591 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~~~~--------~~~h~~~V~~i~f~~~~-~~lat~~~d~~ 591 (712)
..+.||+..+.+++- +.+| ++...+-|+..++|.+..+. ..+|.+.|.+|+++..+ .+|+++|.|++
T Consensus 359 ~ii~GH~e~vlSL~~---~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~t 435 (775)
T KOG0319|consen 359 QIIPGHTEAVLSLDV---WSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCT 435 (775)
T ss_pred EEEeCchhheeeeee---cccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCce
Confidence 378899999998882 3455 44444444444558774321 33799999999998755 59999999999
Q ss_pred EEEEEcCCccccCc--ccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEe
Q 005147 592 IKVFECDAIINENR--DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669 (712)
Q Consensus 592 I~iwD~~~~~~~~~--~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fs 669 (712)
||+|++........ ...+..+...|...|+||+.+| +..+|||||.|.+.+||++..+..+.++.+|+..||||.|+
T Consensus 436 lK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs 514 (775)
T KOG0319|consen 436 LKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAP-NDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFS 514 (775)
T ss_pred EEEecCCCcccccccceehhhHHHHhhcccccceEecC-CCceEEecccccceeeecccCceEEEEeeCCccceEEEEec
Confidence 99999976211111 1111224568999999999999 58899999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 670 SADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
| ..+++||+|.|++||||.+.+..|+.++-
T Consensus 515 ~-~dq~laT~SgD~TvKIW~is~fSClkT~e 544 (775)
T KOG0319|consen 515 K-NDQLLATCSGDKTVKIWSISTFSCLKTFE 544 (775)
T ss_pred c-ccceeEeccCCceEEEEEeccceeeeeec
Confidence 8 77999999999999999999999987653
No 440
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.78 E-value=5.8e-19 Score=182.75 Aligned_cols=171 Identities=15% Similarity=0.212 Sum_probs=140.8
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC-Cc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ-GD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~-~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
..+.||+..|..+.| -+..-.|+..++.+....+|++.. +. +.+|..+|.+++|+++|..|.|+|.|+.||+||
T Consensus 208 ~~~~gH~kgvsai~~-fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwD 286 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQW-FPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWD 286 (503)
T ss_pred eeccCCccccchhhh-ccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeec
Confidence 567788888888888 333344444444443334477764 33 458999999999999999999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
+.++. ....+.....++||.|+|.+.+.|++|+.|+.|+.||+|+++.+++|..|-+.|.++.|-| ++..+
T Consensus 287 tETG~--------~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~-~g~rF 357 (503)
T KOG0282|consen 287 TETGQ--------VLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVD-EGRRF 357 (503)
T ss_pred cccce--------EEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEcc-CCceE
Confidence 98853 2444556778899999998779999999999999999999999999999999999999997 99999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEece
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
+|.|+|++++||+.+.+.++..+.+.
T Consensus 358 issSDdks~riWe~~~~v~ik~i~~~ 383 (503)
T KOG0282|consen 358 ISSSDDKSVRIWENRIPVPIKNIADP 383 (503)
T ss_pred eeeccCccEEEEEcCCCccchhhcch
Confidence 99999999999999998888766543
No 441
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=7.8e-18 Score=161.44 Aligned_cols=168 Identities=17% Similarity=0.214 Sum_probs=138.2
Q ss_pred CCccceecccCCCCCCcEEEEEcCCcEEEEEccCC-----ceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCcc
Q 005147 528 YSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-----DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAII 601 (712)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~-----~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~ 601 (712)
.+..+++.| +...+..+..++++..--+||+.-. .+..|...|.++.|++ ..+.++++|.|++||+||....
T Consensus 60 ~D~LfdV~W-se~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~- 137 (311)
T KOG0277|consen 60 EDGLFDVAW-SENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP- 137 (311)
T ss_pred ccceeEeee-cCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCC-
Confidence 345688999 8888888888888766666886432 2336999999999998 5668899999999999998541
Q ss_pred ccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEEC
Q 005147 602 NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD 681 (712)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~ 681 (712)
....+..+|.+.|....|+|.++++++++|.||+++|||++.......+..|...|.|++|+..+..+++||+-
T Consensus 138 ------~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~v 211 (311)
T KOG0277|consen 138 ------NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGV 211 (311)
T ss_pred ------cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCC
Confidence 22334678999999999999999999999999999999999765555599999999999999888999999999
Q ss_pred CCcEEEEeCCCCcEEEEEecee
Q 005147 682 DGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 682 D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
|+.|++||+++-......+.+|
T Consensus 212 d~~vr~wDir~~r~pl~eL~gh 233 (311)
T KOG0277|consen 212 DNLVRGWDIRNLRTPLFELNGH 233 (311)
T ss_pred CceEEEEehhhccccceeecCC
Confidence 9999999999766444444554
No 442
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.77 E-value=1.2e-17 Score=168.34 Aligned_cols=178 Identities=21% Similarity=0.279 Sum_probs=136.2
Q ss_pred CceeeccCCCccceecccCCCCC-CcEEEEEcCCcEEEEEccCCc--------eecCCCCeeEEEEcCCCCEEEEEeCCC
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLE-GLCKYLSFSKLRVKADLNQGD--------LLNSSNLVCSLSFDRDGELFAAAGVNK 590 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~dl~~~~--------~~~h~~~V~~i~f~~~~~~lat~~~d~ 590 (712)
-.....||++++....|+..... +++..++.+..-.+|....+. +.||...|.+|+..++|..|++|+.|.
T Consensus 136 ~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~ 215 (423)
T KOG0313|consen 136 SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDT 215 (423)
T ss_pred eEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccc
Confidence 35678899999999999765544 334444444444446665443 348999999999999999999999999
Q ss_pred cEEEEEcCCcc------------------ccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc-
Q 005147 591 KIKVFECDAII------------------NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ- 651 (712)
Q Consensus 591 ~I~iwD~~~~~------------------~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~- 651 (712)
+|+||+..+.. .........+...+|..+|.+|.|++ ...++++++|.+|+.||+.+++
T Consensus 216 ~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~ 293 (423)
T KOG0313|consen 216 MLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGL 293 (423)
T ss_pred eeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC--CCceEeecccceEEEEEeecccc
Confidence 99999943210 01111223455678999999999987 6788888888888888877643
Q ss_pred -------------------------------------------EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEE
Q 005147 652 -------------------------------------------VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (712)
Q Consensus 652 -------------------------------------------~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lW 688 (712)
+..+|.+|...|.+|.|+|.+...|+|||.|+++++|
T Consensus 294 ~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klW 373 (423)
T KOG0313|consen 294 KSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLW 373 (423)
T ss_pred eeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEE
Confidence 3456789999999999999999999999999999999
Q ss_pred eCCCCc-EEEEE
Q 005147 689 SINQAI-LLLHL 699 (712)
Q Consensus 689 d~~~~~-~v~~~ 699 (712)
|+|+.+ +++.+
T Consensus 374 DvRS~k~plydI 385 (423)
T KOG0313|consen 374 DVRSTKAPLYDI 385 (423)
T ss_pred EeccCCCcceee
Confidence 999988 55544
No 443
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.76 E-value=2.5e-17 Score=165.42 Aligned_cols=170 Identities=17% Similarity=0.254 Sum_probs=146.6
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
..+++.+|+++++.++. +| ...+++....++...+|++.+|.+ .+|.+.|+++.|+.+|.+||||+.+|.|+||
T Consensus 56 S~~tF~~H~~svFavsl-~P-~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~ 133 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSL-HP-NNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVF 133 (399)
T ss_pred ceeehhhcCCceEEEEe-CC-CCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEE
Confidence 35788999999999998 67 555655556666667799998874 4899999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCE
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~ 675 (712)
+..++.. .......-..+.-++||| .+..|+.|+.||.|-+|.+.++...+.|.+|..+|++=.|.| +|+.
T Consensus 134 ~~stg~~-------~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p-dGKr 204 (399)
T KOG0296|consen 134 KVSTGGE-------QWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP-DGKR 204 (399)
T ss_pred EcccCce-------EEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC-CCce
Confidence 9976321 122223456788899999 699999999999999999999888999999999999999998 8999
Q ss_pred EEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 676 LASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 676 l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+++|.+||+|++||..++.++..+-
T Consensus 205 ~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 205 ILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred EEEEecCceEEEEecCCCceeEEec
Confidence 9999999999999999999987765
No 444
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.76 E-value=3.2e-18 Score=163.23 Aligned_cols=169 Identities=17% Similarity=0.288 Sum_probs=143.9
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcCC--CCEEEEEeCCC
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDRD--GELFAAAGVNK 590 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~~--~~~lat~~~d~ 590 (712)
.+..+|+||.+++..+.|++|...++++.++|+.-.++|.-.+|+.. .|...|++|+|.|. |-.||+|+.||
T Consensus 47 ~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG 126 (299)
T KOG1332|consen 47 KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDG 126 (299)
T ss_pred eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCC
Confidence 57889999999999999999999999999999988888999887643 58999999999995 56899999999
Q ss_pred cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC-------------CEEEEEeCCCcEEEEECCCCc--EEEE
Q 005147 591 KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK-------------SQIASSNFEGVVQVWDVSRSQ--VLTE 655 (712)
Q Consensus 591 ~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~-------------~~lasgs~Dg~V~lwD~~~~~--~~~~ 655 (712)
+|.|.+++.. ...........|.-.|++|+|.|-.. ..|+||+.|..|+||+..++. .-++
T Consensus 127 ~vsvl~~~~~----g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~ 202 (299)
T KOG1332|consen 127 KVSVLTYDSS----GGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERT 202 (299)
T ss_pred cEEEEEEcCC----CCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhh
Confidence 9999999762 12223445678999999999999532 359999999999999998874 3456
Q ss_pred eccCCCcEEEEEEecCCC---CEEEEEECCCcEEEEeCC
Q 005147 656 MREHERRVWSIDFSSADP---TLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 656 ~~~H~~~v~sv~fsp~~~---~~l~sgs~D~~v~lWd~~ 691 (712)
|.+|++.|+.|+|.|..+ ..|||||.||+|.||-.+
T Consensus 203 l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~ 241 (299)
T KOG1332|consen 203 LEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD 241 (299)
T ss_pred hhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence 899999999999999654 689999999999999765
No 445
>PTZ00420 coronin; Provisional
Probab=99.76 E-value=4.7e-17 Score=181.98 Aligned_cols=134 Identities=16% Similarity=0.288 Sum_probs=111.2
Q ss_pred eecCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcc-cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 564 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRD-IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 564 ~~~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
+.+|.+.|.+++|+|+ +++|||||.|++|+|||+.+....... ........+|...|.+|+|+|....+|+||+.||+
T Consensus 70 L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dgt 149 (568)
T PTZ00420 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSF 149 (568)
T ss_pred EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCe
Confidence 4579999999999996 789999999999999999753211010 11123456799999999999964456789999999
Q ss_pred EEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 642 V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|+|||+++++.+..+. |...|.+++|+| +|.+|++++.|++|+|||++++..+.++
T Consensus 150 IrIWDl~tg~~~~~i~-~~~~V~Slswsp-dG~lLat~s~D~~IrIwD~Rsg~~i~tl 205 (568)
T PTZ00420 150 VNIWDIENEKRAFQIN-MPKKLSSLKWNI-KGNLLSGTCVGKHMHIIDPRKQEIASSF 205 (568)
T ss_pred EEEEECCCCcEEEEEe-cCCcEEEEEECC-CCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 9999999999888876 678899999998 9999999999999999999999887654
No 446
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.75 E-value=1.2e-18 Score=172.99 Aligned_cols=171 Identities=19% Similarity=0.280 Sum_probs=141.4
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~ 597 (712)
-.|.||++.|..+.+ .+.++...+.+....+||..+|.. ++|...|..+.|+ ..+++|++.|.+|.+||+
T Consensus 231 ~~L~GHtGSVLCLqy----d~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm 304 (499)
T KOG0281|consen 231 KILTGHTGSVLCLQY----DERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDM 304 (499)
T ss_pred HhhhcCCCcEEeeec----cceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEec
Confidence 367899999988777 333444444444445599998874 5799999999996 469999999999999999
Q ss_pred CCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEE
Q 005147 598 DAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLA 677 (712)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~ 677 (712)
.+. .++....+..+|.+.|+.|.|+. .+++|++.|.+|++||+.++.+++++.+|...|-|+.+. +.+++
T Consensus 305 ~sp----s~it~rrVLvGHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr---~rlvV 374 (499)
T KOG0281|consen 305 ASP----TDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR---DRLVV 374 (499)
T ss_pred cCc----hHHHHHHHHhhhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhcccccceehhcc---CeEEE
Confidence 763 34444556679999999999974 599999999999999999999999999999999999985 79999
Q ss_pred EEECCCcEEEEeCCCCcEEEEEeceeeccCce
Q 005147 678 SGSDDGSVKLWSINQAILLLHLVDVSFETKRT 709 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~v~~~~~~~~~~~~~ 709 (712)
|||.|.+|++||+..|.++ ..+++|.+..++
T Consensus 375 SGSSDntIRlwdi~~G~cL-RvLeGHEeLvRc 405 (499)
T KOG0281|consen 375 SGSSDNTIRLWDIECGACL-RVLEGHEELVRC 405 (499)
T ss_pred ecCCCceEEEEeccccHHH-HHHhchHHhhhh
Confidence 9999999999999999988 567777666554
No 447
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.75 E-value=8.5e-18 Score=181.87 Aligned_cols=202 Identities=15% Similarity=0.166 Sum_probs=154.4
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK 556 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 556 (712)
..+||...|-|.....+|..++.++.+++ ..+.....||+..+.++.. +-.....+...+.|....+
T Consensus 360 ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~-~~~~asffvsvS~D~tlK~ 438 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAG-SKLGASFFVSVSQDCTLKL 438 (775)
T ss_pred EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeee-cccCccEEEEecCCceEEE
Confidence 57788888887775556644444333322 1233445699988887776 3222222233333333333
Q ss_pred EEccC-------Cc------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEE
Q 005147 557 ADLNQ-------GD------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 623 (712)
Q Consensus 557 ~dl~~-------~~------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v 623 (712)
|++.. .. ...|...|+|++.+|...+|||||.|++.|||++.. .....+..+|+..|.||
T Consensus 439 W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~-------~~l~~vLsGH~RGvw~V 511 (775)
T KOG0319|consen 439 WDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ-------LRLLGVLSGHTRGVWCV 511 (775)
T ss_pred ecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC-------ceEEEEeeCCccceEEE
Confidence 55543 11 124899999999999999999999999999999962 12335678999999999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 624 ~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|+|. ...+||+|.|++|+||.+.+..|+++|+||+..|..+.|-. ++..|+||+.||-+|||+++++.|+.++-
T Consensus 512 ~Fs~~-dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~-~~~qliS~~adGliKlWnikt~eC~~tlD 586 (775)
T KOG0319|consen 512 SFSKN-DQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIR-NGKQLISAGADGLIKLWNIKTNECEMTLD 586 (775)
T ss_pred Eeccc-cceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeee-CCcEEEeccCCCcEEEEeccchhhhhhhh
Confidence 99995 78999999999999999999999999999999999999995 99999999999999999999999997654
No 448
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.75 E-value=7.7e-18 Score=165.28 Aligned_cols=208 Identities=17% Similarity=0.270 Sum_probs=156.2
Q ss_pred HHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCccccCCC-------------------------CCCce-eeccCCC
Q 005147 476 KLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERS-------------------------SINNL-GSKEGYS 529 (712)
Q Consensus 476 ~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------------------------~~~~~-~l~gh~~ 529 (712)
+.|.+|+. .|++-+++..|||||.-.+.++-+-+ .-|.+ +|-.|.+
T Consensus 102 ~yEt~ylt--------~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~d 173 (430)
T KOG0640|consen 102 EYETKYLT--------SHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVD 173 (430)
T ss_pred ccceEEEe--------ecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccC
Confidence 44666653 57778899999999985443321111 11443 5678999
Q ss_pred ccceecccCCCCCCcEEEEEcCCcEEE-EEccC------CceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccc
Q 005147 530 EGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQ------GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN 602 (712)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~------~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~ 602 (712)
+|..++| .|. ..+.+....+..++ +|... .+.+....+|.+|+|+|.|++++.|....++++||+++.++
T Consensus 174 evn~l~F-HPr--e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qc 250 (430)
T KOG0640|consen 174 EVNDLDF-HPR--ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQC 250 (430)
T ss_pred cccceee-cch--hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeE
Confidence 9998888 332 22222222222222 55432 23445688999999999999999999999999999988544
Q ss_pred cCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec-cCC-CcEEEEEEecCCCCEEEEEE
Q 005147 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHE-RRVWSIDFSSADPTLLASGS 680 (712)
Q Consensus 603 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-~H~-~~v~sv~fsp~~~~~l~sgs 680 (712)
-... ....+|+..|++|.+++ ++++.+||+.||.|+|||--+++|+.++. +|. ..|.+..|. .++.+++|.+
T Consensus 251 fvsa----nPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ft-kn~kyiLsSG 324 (430)
T KOG0640|consen 251 FVSA----NPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFT-KNGKYILSSG 324 (430)
T ss_pred eeec----CcccccccceeEEEecC-CccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEc-cCCeEEeecC
Confidence 2221 13457899999999999 69999999999999999999999999985 565 478999999 5999999999
Q ss_pred CCCcEEEEeCCCCcEEEEEe
Q 005147 681 DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|..|++|.+.++.++..+.
T Consensus 325 ~DS~vkLWEi~t~R~l~~Yt 344 (430)
T KOG0640|consen 325 KDSTVKLWEISTGRMLKEYT 344 (430)
T ss_pred CcceeeeeeecCCceEEEEe
Confidence 99999999999999998765
No 449
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.75 E-value=1.1e-18 Score=169.87 Aligned_cols=181 Identities=17% Similarity=0.211 Sum_probs=130.7
Q ss_pred CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
..|.||+.-|.++++. .+-++.++|+ +-|+|+.-+...+ +-+..+..++.|++.|++|+|++++||||||.+||
T Consensus 78 s~H~hIi~tY~vaFqt---~d~YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNi 152 (378)
T KOG1345|consen 78 SPHQHIIDTYEVAFQT---SDAYVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENI 152 (378)
T ss_pred ccchhhhHHHHHHhhc---CceEEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceE
Confidence 4578899988877732 2355666777 6899999885544 88999999999999999999999999999999999
Q ss_pred eec--CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 114 VMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 114 ll~--~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
||- ....||+||||..+..|.-...
T Consensus 153 Lif~~df~rvKlcDFG~t~k~g~tV~~----------------------------------------------------- 179 (378)
T KOG1345|consen 153 LIFDADFYRVKLCDFGLTRKVGTTVKY----------------------------------------------------- 179 (378)
T ss_pred EEecCCccEEEeeecccccccCceehh-----------------------------------------------------
Confidence 996 3457999999988554332000
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC---C--CCCccchHHHHHHHHHhh
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---P--VSCASDIYRLGVLLFELF 266 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~--~~~~sDIwSlGvll~eLl 266 (712)
.-.+..|.+||++... . ..+.+|||.||+++|.++
T Consensus 180 ----------------------------------------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cl 219 (378)
T KOG1345|consen 180 ----------------------------------------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCL 219 (378)
T ss_pred ----------------------------------------hhhhcccCCcHHHhhccccceEecccccchheeeeeeeee
Confidence 1235678999977432 2 688999999999999999
Q ss_pred CCCCCChhh-------HH--HHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCC
Q 005147 267 CPFSTGEEK-------TR--TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 267 ~pf~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (712)
++.+++... .. .+..-.....|..+....+....+.++-|.++|++|
T Consensus 220 tG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 220 TGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred cCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 954444311 11 111112223444555555666688889999999988
No 450
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.75 E-value=3.5e-17 Score=168.93 Aligned_cols=169 Identities=18% Similarity=0.378 Sum_probs=137.8
Q ss_pred CccceecccCCCCCCcEEEEEcCCcEEE-EEccCC---ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc-
Q 005147 529 SEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG---DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE- 603 (712)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~---~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~- 603 (712)
..+.+++| +.+|...++...++.++ |+...+ .+-.|.++|.++.|+.+|.+|+++|.|+++-+||.-++...
T Consensus 236 kdVT~L~W---n~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q 312 (524)
T KOG0273|consen 236 KDVTSLDW---NNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQ 312 (524)
T ss_pred CCcceEEe---cCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEE
Confidence 35688999 66777666666666655 877532 24469999999999999999999999999999999652100
Q ss_pred -----------------------Cc---------ccccc-eEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC
Q 005147 604 -----------------------NR---------DIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS 650 (712)
Q Consensus 604 -----------------------~~---------~~~~~-~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~ 650 (712)
.. ....| .+..+|..+|+++.|+| .+.+|+|+|+|++++||....+
T Consensus 313 ~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~~~ 391 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNP-TGSLLASCSDDGTLKIWSMGQS 391 (524)
T ss_pred eeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECC-CCceEEEecCCCeeEeeecCCC
Confidence 00 00112 34567999999999999 6999999999999999999999
Q ss_pred cEEEEeccCCCcEEEEEEecCC--------CCEEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 651 QVLTEMREHERRVWSIDFSSAD--------PTLLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 651 ~~~~~~~~H~~~v~sv~fsp~~--------~~~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
.++..+.+|++.|.++.|+|.+ +..+++++.|++|++||+..|.++..+..
T Consensus 392 ~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k 450 (524)
T KOG0273|consen 392 NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK 450 (524)
T ss_pred cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc
Confidence 9999999999999999999843 46999999999999999999999988643
No 451
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=3.9e-18 Score=173.81 Aligned_cols=213 Identities=17% Similarity=0.212 Sum_probs=145.3
Q ss_pred Ccceeee-ccceeeccCCCCCccccccccccccc------------------------ccCceEEEEeeCCccHHHhhcC
Q 005147 20 DFELRKH-SDGVELTHGDHLRNQGGLSGVCENEA------------------------AIDPFVHAIEWGDVSLRQWLDK 74 (712)
Q Consensus 20 ~~~~r~~-~~~~~l~~~~H~ni~~~~~~~~~~~~------------------------~~~~~~l~~e~~g~sL~~~l~~ 74 (712)
..-||.. ++.++| ..|||||.++.. |.++. ....+|++|.-...+|+++|..
T Consensus 259 ~~t~R~l~nqtvhL--a~HPNIvri~~a-F~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~ 335 (598)
T KOG4158|consen 259 MGTFRPLPNQTVHL--AKHPNIVRIQTA-FIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT 335 (598)
T ss_pred cceeeeCCCCCccc--CCCCCEEeehhh-hhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc
Confidence 3445554 333333 479999998884 43332 1126788888888999999955
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeec--CCC--cEEEEecccccCCCCCCcccccccccccccC
Q 005147 75 PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKD 150 (712)
Q Consensus 75 ~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~--~~~--~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~ 150 (712)
.. .+.....-|+.|+++|+.|||.+||.|||||.+|||+. +++ .+.+.|||.|--...
T Consensus 336 ~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~---------------- 397 (598)
T KOG4158|consen 336 RH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN---------------- 397 (598)
T ss_pred CC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccc----------------
Confidence 54 57778889999999999999999999999999999996 333 468899998721100
Q ss_pred CCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccccc
Q 005147 151 LSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQI 230 (712)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 230 (712)
++...++. ..-.|
T Consensus 398 ------------------------------------------hGlqlpy~-----S~~Vd-------------------- 410 (598)
T KOG4158|consen 398 ------------------------------------------HGLQLPYE-----SDEVD-------------------- 410 (598)
T ss_pred ------------------------------------------cccccccc-----ccccc--------------------
Confidence 00000000 00011
Q ss_pred ccccCccccCcccccCCC------CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHH
Q 005147 231 LLMETNWYASPEELAGAP------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASF 301 (712)
Q Consensus 231 ~~~gt~~Y~aPE~~~~~~------~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (712)
.-|....||||+....+ --.++|.|+.|.+.||+++ ||....+.........+..+|.-.....|...++
T Consensus 411 -~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rql 489 (598)
T KOG4158|consen 411 -LGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQL 489 (598)
T ss_pred -CCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHH
Confidence 33677789999986544 1348999999999999999 8887433222222344445555444455666699
Q ss_pred HHHcCCCCCCCCCCH---HHHhc
Q 005147 302 CLWLLHPEPSGRPKM---GELLQ 321 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~---~eiL~ 321 (712)
+..+|+.||++|++. ..+|+
T Consensus 490 V~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHhcCCccccCCccHHHhHHH
Confidence 999999999999974 44554
No 452
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.75 E-value=2e-17 Score=162.18 Aligned_cols=176 Identities=16% Similarity=0.196 Sum_probs=144.4
Q ss_pred CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc-----CCceecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 518 SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN-----QGDLLNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 518 ~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~-----~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
..|++.+.||.++++...| +| +|.+.+..+.+..+. |..- ...+.+|+++|..+.|.+|++.++++|.|++
T Consensus 37 ~ap~m~l~gh~geI~~~~F-~P--~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 37 QAPIMLLPGHKGEIYTIKF-HP--DGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKT 113 (338)
T ss_pred cchhhhcCCCcceEEEEEE-CC--CCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCce
Confidence 4688999999999999999 55 777777776666655 8753 2345589999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA 671 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~ 671 (712)
|+.||.+++.+ ......|.+-|++++-+.....++.||+.||+++|||+|+..++++++ ..-.+++|.|. .
T Consensus 114 v~~wD~~tG~~-------~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~-d 184 (338)
T KOG0265|consen 114 VRGWDAETGKR-------IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFK-D 184 (338)
T ss_pred EEEEeccccee-------eehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEec-c
Confidence 99999987533 334457788888887554445688899999999999999999999886 46789999999 5
Q ss_pred CCCEEEEEECCCcEEEEeCCCCcEEEEEeceeecc
Q 005147 672 DPTLLASGSDDGSVKLWSINQAILLLHLVDVSFET 706 (712)
Q Consensus 672 ~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~~~ 706 (712)
.+.-+.||+-|+.|++||++.+..+ .++.+|.++
T Consensus 185 ~s~qv~sggIdn~ikvWd~r~~d~~-~~lsGh~Dt 218 (338)
T KOG0265|consen 185 TSDQVISGGIDNDIKVWDLRKNDGL-YTLSGHADT 218 (338)
T ss_pred cccceeeccccCceeeeccccCcce-EEeecccCc
Confidence 8899999999999999999987766 455566554
No 453
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.75 E-value=3e-17 Score=177.67 Aligned_cols=188 Identities=18% Similarity=0.251 Sum_probs=155.5
Q ss_pred CcccccccCCCCCCCCccccCC---------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce
Q 005147 495 PLVRHSQLSSDGRTSKPLVNER---------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL 564 (712)
Q Consensus 495 ~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~ 564 (712)
..+..+.|++-|.++++....- +..-.+...||+..+..++. +.||.+.++..++++|+ |+...|-|
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~Y---SpDgq~iaTG~eDgKVKvWn~~SgfC 384 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAY---SPDGQLIATGAEDGKVKVWNTQSGFC 384 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEE---CCCCcEEEeccCCCcEEEEeccCceE
Confidence 3456688888898876665541 12234566799999999888 88999999999999988 99998765
Q ss_pred e----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 565 L----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 565 ~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
+ .|++.|+.+.|+..|+.+++++.||+|+.||+....+ .........-..+||+..| .+.++.+|+.|.
T Consensus 385 ~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrN------fRTft~P~p~QfscvavD~-sGelV~AG~~d~ 457 (893)
T KOG0291|consen 385 FVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRN------FRTFTSPEPIQFSCVAVDP-SGELVCAGAQDS 457 (893)
T ss_pred EEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccce------eeeecCCCceeeeEEEEcC-CCCEEEeeccce
Confidence 5 6999999999999999999999999999999965221 1112233445578999998 588888888876
Q ss_pred -cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 641 -VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 641 -~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.|.+|++.+|+.+-.+.||+++|.+++|+| +++.|||||.|.+|++||+=..
T Consensus 458 F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~-~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 458 FEIFVWSVQTGQLLDILSGHEGPVSGLSFSP-DGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred EEEEEEEeecCeeeehhcCCCCcceeeEEcc-ccCeEEeccccceEEEEEeecc
Confidence 599999999999999999999999999998 9999999999999999997543
No 454
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.75 E-value=3.3e-17 Score=156.64 Aligned_cols=194 Identities=17% Similarity=0.177 Sum_probs=154.0
Q ss_pred CCCCCCcccccccCCCCCCCCcc---------ccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPL---------VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
.+.|+-.|+.++|+.|..++-.. +..+...|..+..||++.+..+-|+ ..|..+...+++.+..+||.+
T Consensus 96 sf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc--~eD~~iLSSadd~tVRLWD~r 173 (334)
T KOG0278|consen 96 SFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWC--HEDKCILSSADDKTVRLWDHR 173 (334)
T ss_pred hhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEe--ccCceEEeeccCCceEEEEec
Confidence 45677788999999988765222 3445567888999999999999994 344444444444444449999
Q ss_pred CCceec---CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 561 QGDLLN---SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 561 ~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
+++..+ -...|++++.+++|++|.+ ...+.|+.||..+. .++....-...|.+.+.+|. +..+++|+
T Consensus 174 Tgt~v~sL~~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf--------~~lKs~k~P~nV~SASL~P~-k~~fVaGg 243 (334)
T KOG0278|consen 174 TGTEVQSLEFNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSF--------GLLKSYKMPCNVESASLHPK-KEFFVAGG 243 (334)
T ss_pred cCcEEEEEecCCCCcceeeccCCCEEEE-ecCceeEEeccccc--------cceeeccCccccccccccCC-CceEEecC
Confidence 998664 4889999999999988776 45678999999762 22333344557888999994 79999999
Q ss_pred CCCcEEEEECCCCcEEEEe-ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 638 FEGVVQVWDVSRSQVLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~-~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
.|+.+.-||..+|..+-.+ .+|-++|.||.|+| +|...|+||.||+|+||-+.-++..
T Consensus 244 ed~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSP-dGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 244 EDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSP-DGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred cceEEEEEeccCCceeeecccCCCCceEEEEECC-CCceeeccCCCceEEEEEecCCCch
Confidence 9999999999999988886 89999999999999 9999999999999999998765543
No 455
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.74 E-value=1.5e-17 Score=176.40 Aligned_cols=157 Identities=14% Similarity=0.236 Sum_probs=134.1
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
+.++.|..+.+.+++++..+... ..|.+.|.+|+.+|...+++|+|+|-+||+||... .+.+..+..+|
T Consensus 71 v~GsDD~~IrVfnynt~ekV~~F-----eAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~------~wa~~qtfeGH 139 (794)
T KOG0276|consen 71 VTGSDDMQIRVFNYNTGEKVKTF-----EAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWEN------EWACEQTFEGH 139 (794)
T ss_pred EEecCCceEEEEecccceeeEEe-----eccccceeeeeecCCCCeEEecCCccEEEEeeccC------ceeeeeEEcCc
Confidence 45667777777777776654433 35999999999999999999999999999999963 34556677899
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC-CCCEEEEEECCCcEEEEeCCCCcE
Q 005147 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA-DPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~-~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
..-|.+|+|+|.|.+.|||++-|++|++|.+.+..+..++++|++.|+||+|-|. |..+|+||++|.+|+|||..+..|
T Consensus 140 ~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~C 219 (794)
T KOG0276|consen 140 EHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSC 219 (794)
T ss_pred ceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHH
Confidence 9999999999999999999999999999999999999999999999999999862 225999999999999999999888
Q ss_pred EEEEeceeec
Q 005147 696 LLHLVDVSFE 705 (712)
Q Consensus 696 v~~~~~~~~~ 705 (712)
+. .+++|..
T Consensus 220 V~-TLeGHt~ 228 (794)
T KOG0276|consen 220 VQ-TLEGHTN 228 (794)
T ss_pred HH-Hhhcccc
Confidence 84 4555533
No 456
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.74 E-value=1.6e-16 Score=189.76 Aligned_cols=191 Identities=17% Similarity=0.270 Sum_probs=146.7
Q ss_pred CCCCCcccccccCCCCCCCCccccCCC----------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERS----------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 554 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~----------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (712)
..|...++++.|++||..+++...+.. ..|...+.+| ..+..+.| ++.....+...+.+...
T Consensus 480 ~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~l~~-~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 480 LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASR-SKLSGICW-NSYIKSQVASSNFEGVV 557 (793)
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEeccc-CceeeEEe-ccCCCCEEEEEeCCCeE
Confidence 347778999999999986543322211 1133344443 46778888 55445555555555555
Q ss_pred EEEEccCCce----ecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC
Q 005147 555 VKADLNQGDL----LNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 629 (712)
Q Consensus 555 v~~dl~~~~~----~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~ 629 (712)
.+||+.++.. .+|.+.|.+++|+| ++.+|+|||.|++|++||+++.. .+....+...|.+++|++.+
T Consensus 558 ~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~--------~~~~~~~~~~v~~v~~~~~~ 629 (793)
T PLN00181 558 QVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV--------SIGTIKTKANICCVQFPSES 629 (793)
T ss_pred EEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc--------EEEEEecCCCeEEEEEeCCC
Confidence 5599987653 36999999999997 78999999999999999997531 22233345689999998777
Q ss_pred CCEEEEEeCCCcEEEEECCCCc-EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 630 KSQIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 630 ~~~lasgs~Dg~V~lwD~~~~~-~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
+.+|++|+.||.|++||++++. ++.++.+|...|++++|. ++.+|++||.|++|+|||++.+
T Consensus 630 g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~--~~~~lvs~s~D~~ikiWd~~~~ 692 (793)
T PLN00181 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV--DSSTLVSSSTDNTLKLWDLSMS 692 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe--CCCEEEEEECCCEEEEEeCCCC
Confidence 9999999999999999999875 678889999999999997 5889999999999999999853
No 457
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.73 E-value=5.6e-18 Score=168.38 Aligned_cols=157 Identities=17% Similarity=0.282 Sum_probs=135.3
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-------eecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-------LLNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-------~~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
.|.-++.+|..+|.++.+ .+|.+...+-+....+|++.+.. +.||...|+.+.|+ ..+|++|+.|.+
T Consensus 268 e~l~tlihHceaVLhlrf----~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRT 341 (499)
T KOG0281|consen 268 EPLNTLIHHCEAVLHLRF----SNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRT 341 (499)
T ss_pred chhhHHhhhcceeEEEEE----eCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCce
Confidence 356688899999988877 67787777777777779998643 55899999999996 459999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA 671 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~ 671 (712)
||+|++.+. +...+..+|+..|.|+.+. +.++++|+.|.+|+|||+..|.+++.+++|+.-|.||.|+
T Consensus 342 ikvW~~st~-------efvRtl~gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd-- 409 (499)
T KOG0281|consen 342 IKVWSTSTC-------EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-- 409 (499)
T ss_pred EEEEeccce-------eeehhhhcccccceehhcc---CeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--
Confidence 999999662 4444567899999999875 6899999999999999999999999999999999999996
Q ss_pred CCCEEEEEECCCcEEEEeCCCCc
Q 005147 672 DPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 672 ~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
...++||+.||+|++||+..+.
T Consensus 410 -~krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 410 -NKRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred -CceeeeccccceEEEEeccccc
Confidence 5889999999999999998754
No 458
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.72 E-value=2.3e-16 Score=152.86 Aligned_cols=162 Identities=14% Similarity=0.252 Sum_probs=132.6
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEccCCc---ee-----cCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLNQGD---LL-----NSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~~~~---~~-----~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
...+.||.+.+..++| +|-. |.+......+.. .+|+...++ +. +|...|.+++|+|.|++||+||.|.+
T Consensus 7 ~~~~~gh~~r~W~~aw-hp~~-g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t 84 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAW-HPGK-GVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT 84 (312)
T ss_pred EEeecCCCCcEEEEEe-ccCC-ceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence 4567899999999999 4443 443333333333 448887422 22 58999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCcEEEEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDF 668 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~---~~~~~~~~H~~~v~sv~f 668 (712)
+-||.-.. ....+....-+|...|-||+|++ ++++|||++.|..|-||.+..+ .++..+++|+..|-.|.|
T Consensus 85 ~~Iw~k~~-----~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~W 158 (312)
T KOG0645|consen 85 VVIWKKED-----GEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIW 158 (312)
T ss_pred EEEeecCC-----CceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEE
Confidence 99998653 33445556779999999999999 6999999999999999999854 588899999999999999
Q ss_pred ecCCCCEEEEEECCCcEEEEeCC
Q 005147 669 SSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 669 sp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|| ...+|+|+|.|.+|++|.-.
T Consensus 159 HP-t~dlL~S~SYDnTIk~~~~~ 180 (312)
T KOG0645|consen 159 HP-TEDLLFSCSYDNTIKVYRDE 180 (312)
T ss_pred cC-CcceeEEeccCCeEEEEeec
Confidence 98 78999999999999999766
No 459
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.72 E-value=4.7e-17 Score=178.53 Aligned_cols=153 Identities=18% Similarity=0.297 Sum_probs=133.1
Q ss_pred CCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcc
Q 005147 527 GYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII 601 (712)
Q Consensus 527 h~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~ 601 (712)
.++.+.+++| .|...- .+++...+.+. ||-+=++++ .|.++|..|.|+|++.+|++||+|-+||||.+.+
T Consensus 8 kSsRvKglsF-HP~rPw--ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~-- 82 (1202)
T KOG0292|consen 8 KSSRVKGLSF-HPKRPW--ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT-- 82 (1202)
T ss_pred ccccccceec-CCCCCE--EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc--
Confidence 3445667777 555553 46666667766 888877655 6999999999999999999999999999999965
Q ss_pred ccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEEC
Q 005147 602 NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD 681 (712)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~ 681 (712)
..+..+..+|-..|..+.||+ .-.+|+|+|.|.+|+||+..+++++..++||...|.|..|+| ...+++|+|.
T Consensus 83 -----rrclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhp-tEDlIVSaSL 155 (1202)
T KOG0292|consen 83 -----RRCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHP-TEDLIVSASL 155 (1202)
T ss_pred -----ceehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCC-ccceEEEecc
Confidence 345677889999999999998 589999999999999999999999999999999999999998 7799999999
Q ss_pred CCcEEEEeCC
Q 005147 682 DGSVKLWSIN 691 (712)
Q Consensus 682 D~~v~lWd~~ 691 (712)
|.+|+|||+.
T Consensus 156 DQTVRVWDis 165 (1202)
T KOG0292|consen 156 DQTVRVWDIS 165 (1202)
T ss_pred cceEEEEeec
Confidence 9999999985
No 460
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.72 E-value=1.7e-16 Score=171.98 Aligned_cols=203 Identities=16% Similarity=0.297 Sum_probs=162.8
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecc-------cCCCCCCcEEEEEcCC-
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGW-------INPFLEGLCKYLSFSK- 552 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~-------~~~~~~~~~~~~~~~~- 552 (712)
...+|-.-.++...||||+..+.+..++ +.-..+++..|++.|.++.| ++.+.||++..|+...
T Consensus 345 KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY 424 (893)
T KOG0291|consen 345 KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRY 424 (893)
T ss_pred eccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccc
Confidence 3456777788999999999876654443 22356799999999998887 4456778877776443
Q ss_pred ---------------------------------cEE-EEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 553 ---------------------------------LRV-KADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 553 ---------------------------------~~v-~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
+.+ +|.+++|+++ ||.++|.+++|+|+++.||+||+|++||+
T Consensus 425 rNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRi 504 (893)
T KOG0291|consen 425 RNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRI 504 (893)
T ss_pred ceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEE
Confidence 222 4888998865 89999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe------------------
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM------------------ 656 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~------------------ 656 (712)
||+-. ....+....+.+.+..++|+| ++..||.+.-||.|.+||+..+..+.++
T Consensus 505 W~if~-------s~~~vEtl~i~sdvl~vsfrP-dG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta 576 (893)
T KOG0291|consen 505 WDIFS-------SSGTVETLEIRSDVLAVSFRP-DGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITA 576 (893)
T ss_pred EEeec-------cCceeeeEeeccceeEEEEcC-CCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeeh
Confidence 99843 233566777889999999999 6999999999999999999865443222
Q ss_pred --ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 657 --REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 657 --~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.+-.+..+++++++ ||..+++|+....|+|+|+.++..+..+-
T Consensus 577 ~~sa~~K~Ftti~ySa-DG~~IlAgG~sn~iCiY~v~~~vllkkfq 621 (893)
T KOG0291|consen 577 ENSAKGKTFTTICYSA-DGKCILAGGESNSICIYDVPEGVLLKKFQ 621 (893)
T ss_pred hhcccCCceEEEEEcC-CCCEEEecCCcccEEEEECchhheeeeEE
Confidence 12346789999996 99999999999999999999988877653
No 461
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.72 E-value=6.7e-17 Score=162.19 Aligned_cols=169 Identities=23% Similarity=0.284 Sum_probs=144.7
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccC-----CceecCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQ-----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~-----~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
.-.|+||++.+..+.+ ...|...+....+..+ +|++.+ ..+.+|...|.++.|-|.|+++++++.|.+|+.
T Consensus 143 e~~LrGHt~sv~di~~---~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~ 219 (406)
T KOG0295|consen 143 ERSLRGHTDSVFDISF---DASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKA 219 (406)
T ss_pred hhhhhccccceeEEEE---ecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeE
Confidence 4468999999999988 4445555555555544 499875 235689999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC---
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA--- 671 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~--- 671 (712)
||+.++ .+..+..+|...|..|+.+. |+.++|+++.|.+|++|-+.+++|...+.+|+-+|-+++|.|.
T Consensus 220 We~~tg-------~cv~t~~~h~ewvr~v~v~~-DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~ 291 (406)
T KOG0295|consen 220 WECDTG-------YCVKTFPGHSEWVRMVRVNQ-DGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSY 291 (406)
T ss_pred Eecccc-------eeEEeccCchHhEEEEEecC-CeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccC
Confidence 999773 34456678888999999997 7999999999999999999999999999999999999999982
Q ss_pred -----------CCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 672 -----------DPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 672 -----------~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.++++++||.|++|++||+.+|.++.++.
T Consensus 292 ~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ 331 (406)
T KOG0295|consen 292 PSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLV 331 (406)
T ss_pred cchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEe
Confidence 13699999999999999999999998876
No 462
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.71 E-value=1e-16 Score=162.31 Aligned_cols=140 Identities=14% Similarity=0.222 Sum_probs=122.7
Q ss_pred ceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 563 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 563 ~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
.+.||.++|.++.|+| +.+.||+||.|.+|+||++.............+...+|...|.-|.|||--.+.|+|++.|.+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 3458999999999999 567999999999999999986544444444456677999999999999988899999999999
Q ss_pred EEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEeceeec
Q 005147 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVSFE 705 (712)
Q Consensus 642 V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~~ 705 (712)
|.||++.+|..+-++. |.+-|++++|+ .||++|+|.+.|.+|+|||.++++.+..- .+|..
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn-~dGs~l~TtckDKkvRv~dpr~~~~v~e~-~~heG 216 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFN-RDGSLLCTTCKDKKVRVIDPRRGTVVSEG-VAHEG 216 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEec-cCCceeeeecccceeEEEcCCCCcEeeec-ccccC
Confidence 9999999999998988 99999999999 59999999999999999999999998776 44433
No 463
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.71 E-value=2e-16 Score=164.37 Aligned_cols=192 Identities=21% Similarity=0.210 Sum_probs=147.6
Q ss_pred cccccccCCCCCCCCccccCCC-----CCC---ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc---
Q 005147 496 LVRHSQLSSDGRTSKPLVNERS-----SIN---NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD--- 563 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~~-----~~~---~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~--- 563 (712)
-|.++.|=.||+-++.+..+.- ..+ .-.+.+|+.++.-..| + -.++++.+...|+..+. ||+.+..
T Consensus 70 ~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f-~-~~d~t~l~s~sDd~v~k~~d~s~a~v~~ 147 (487)
T KOG0310|consen 70 VVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKF-S-PQDNTMLVSGSDDKVVKYWDLSTAYVQA 147 (487)
T ss_pred ceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEe-c-ccCCeEEEecCCCceEEEEEcCCcEEEE
Confidence 3556667677776654433321 222 1246699999987777 3 35556555555555544 8887654
Q ss_pred -eecCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 564 -LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 564 -~~~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
+.+|++.|.|.+|+|- +.+++|||.||+|++||+++. ...+.++.|..+|.+|.+-| .+..||+++. ..
T Consensus 148 ~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~-------~~~v~elnhg~pVe~vl~lp-sgs~iasAgG-n~ 218 (487)
T KOG0310|consen 148 ELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSL-------TSRVVELNHGCPVESVLALP-SGSLIASAGG-NS 218 (487)
T ss_pred EecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccC-------CceeEEecCCCceeeEEEcC-CCCEEEEcCC-Ce
Confidence 4589999999999994 559999999999999999861 15678999999999999999 5789998885 46
Q ss_pred EEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 642 VQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 642 V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|++||+-+| +.+..+..|.+.|+|+++.. +++.|+|||.|+.|++||+.+.+.+...
T Consensus 219 vkVWDl~~G~qll~~~~~H~KtVTcL~l~s-~~~rLlS~sLD~~VKVfd~t~~Kvv~s~ 276 (487)
T KOG0310|consen 219 VKVWDLTTGGQLLTSMFNHNKTVTCLRLAS-DSTRLLSGSLDRHVKVFDTTNYKVVHSW 276 (487)
T ss_pred EEEEEecCCceehhhhhcccceEEEEEeec-CCceEeecccccceEEEEccceEEEEee
Confidence 999999976 45555555999999999995 8999999999999999998887776553
No 464
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.71 E-value=3e-17 Score=164.71 Aligned_cols=166 Identities=26% Similarity=0.301 Sum_probs=123.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+...+..++|+|++.+++ .+.. ...+++++++ .+++|.+++......+++..+..++.|++.++.+||++|++|+
T Consensus 47 e~~~~~~~~~~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 122 (225)
T smart00221 47 EIRILKKLKHPNIVKLYG-VFED---PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHR 122 (225)
T ss_pred HHHHHHhCCCCChhhhee-eeec---CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 334567779999999887 3322 2345666666 5679999995443227899999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||+|+||+++..+.++++|||.+........ +
T Consensus 123 di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--------------------------------~---------------- 154 (225)
T smart00221 123 DLKPENILLGMDGLVKLADFGLARFIHRDLA--------------------------------A---------------- 154 (225)
T ss_pred CCCHHHEEEcCCCCEEEeeCceeeEecCccc--------------------------------c----------------
Confidence 9999999999999999999998743321100 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-cCCCCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|++||.+ ....++.++|+|+||+++++|
T Consensus 155 -----------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l 193 (225)
T smart00221 155 -----------------------------------------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYEL 193 (225)
T ss_pred -----------------------------------------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHH
Confidence 00013567889999998 556688899999999999999
Q ss_pred hC---CCCC-ChhhHHHHHhhcccC
Q 005147 266 FC---PFST-GEEKTRTMSSLRHRV 286 (712)
Q Consensus 266 l~---pf~~-~~~~~~~~~~~~~~~ 286 (712)
++ ||.. .+.....+..+..+.
T Consensus 194 ~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 194 LWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred HHCCCCccccchhHHHHHHHHhcCC
Confidence 98 6655 344444555555443
No 465
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=1.8e-16 Score=170.76 Aligned_cols=188 Identities=16% Similarity=0.302 Sum_probs=149.0
Q ss_pred CCcccccccCCCCCCCCccccCC--------CCCCceeecc-CCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-
Q 005147 494 RPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKE-GYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD- 563 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~g-h~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~- 563 (712)
...|+++.|+++|..++++-... .....-.+.+ |.+.+..++| + ...+.....+...+.+|++...
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW-~---~~~lssGsr~~~I~~~dvR~~~~ 292 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAW-N---SSVLSSGSRDGKILNHDVRISQH 292 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEec-c---CceEEEecCCCcEEEEEEecchh
Confidence 56799999999999886553221 1222334566 9999999999 2 4444444444444448887543
Q ss_pred ----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe--
Q 005147 564 ----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 637 (712)
Q Consensus 564 ----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-- 637 (712)
+.+|...|+.+.|++|+.+||+||.|+.+.|||... ...+.....|.+.|-.++|+|....+||+|+
T Consensus 293 ~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~-------~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs 365 (484)
T KOG0305|consen 293 VVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLS-------PEPKFTFTEHTAAVKALAWCPWQSGLLATGGGS 365 (484)
T ss_pred hhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCC-------ccccEEEeccceeeeEeeeCCCccCceEEcCCC
Confidence 457999999999999999999999999999999843 3455677889999999999999999999986
Q ss_pred CCCcEEEEECCCCcE-------------------------------------------EEEeccCCCcEEEEEEecCCCC
Q 005147 638 FEGVVQVWDVSRSQV-------------------------------------------LTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~-------------------------------------------~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
.|++|++||+.+++. +..+.+|+.+|..++++| ||.
T Consensus 366 ~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SP-dg~ 444 (484)
T KOG0305|consen 366 ADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSP-DGE 444 (484)
T ss_pred cccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECC-CCC
Confidence 699999999987642 224579999999999998 999
Q ss_pred EEEEEECCCcEEEEeCCCC
Q 005147 675 LLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~ 693 (712)
.+++|+.|.++++|++=..
T Consensus 445 ~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 445 TIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEEecccCcEEeccccCC
Confidence 9999999999999998653
No 466
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.70 E-value=1.1e-16 Score=171.00 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=132.7
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc------eecCCCCeeEEEE-cCCCCEEEEEeCCCcEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD------LLNSSNLVCSLSF-DRDGELFAAAGVNKKIK 593 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~------~~~h~~~V~~i~f-~~~~~~lat~~~d~~I~ 593 (712)
...++-|++.|..+.. .+... .+..++.++..++|+...+. +..|.+.|.|+++ .++.+++|+||.|+.|.
T Consensus 66 ~asme~HsDWVNDiiL-~~~~~-tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~If 143 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIIL-CGNGK-TLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIF 143 (735)
T ss_pred hhhhhhhHhHHhhHHh-hcCCC-ceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEE
Confidence 3455556655544433 11111 33333333333346555431 3359999999999 78889999999999999
Q ss_pred EEEcCCccc--cCcccccce-EE-ecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEe
Q 005147 594 VFECDAIIN--ENRDIHYPV-VE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669 (712)
Q Consensus 594 iwD~~~~~~--~~~~~~~~~-~~-~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fs 669 (712)
|||++++.. .+.....++ .. .+++..|++++.++ ++..|++|+.++.+++||.++++.+..+.+|+..|..+-.+
T Consensus 144 lWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~ 222 (735)
T KOG0308|consen 144 LWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVN 222 (735)
T ss_pred EEEccCcchhhhhhccccccccCCCCCccceeeeecCC-cceEEEecCcccceEEeccccccceeeeeccccceEEEEEc
Confidence 999997522 111111111 12 27889999999998 68999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 670 SADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+ ||..++|||.||+|++||+++..|+.++.
T Consensus 223 d-DGt~~ls~sSDgtIrlWdLgqQrCl~T~~ 252 (735)
T KOG0308|consen 223 D-DGTRLLSASSDGTIRLWDLGQQRCLATYI 252 (735)
T ss_pred C-CCCeEeecCCCceEEeeeccccceeeeEE
Confidence 6 99999999999999999999999998854
No 467
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.70 E-value=7.2e-17 Score=178.00 Aligned_cols=128 Identities=23% Similarity=0.457 Sum_probs=108.6
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC----------------------------ccc-----------cCc-
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN-----------ENR- 605 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~----------------------------~~~-----------~~~- 605 (712)
.|.+.|+++.|++||.|||+||.|+.|+||.+.. ... ...
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 6999999999999999999999999999998754 000 000
Q ss_pred --ccc----------cc-eEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCC
Q 005147 606 --DIH----------YP-VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672 (712)
Q Consensus 606 --~~~----------~~-~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~ 672 (712)
... .| ....+|.+.|..|+|+. .++|+|++.|.||+||++....|+++|. |.+-|+||+|+|.|
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVD 421 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccC
Confidence 000 11 12358999999999996 7899999999999999999999999998 99999999999999
Q ss_pred CCEEEEEECCCcEEEEeCCCCcEE
Q 005147 673 PTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
.++|+|||.||+|+||++...+.+
T Consensus 422 DryFiSGSLD~KvRiWsI~d~~Vv 445 (712)
T KOG0283|consen 422 DRYFISGSLDGKVRLWSISDKKVV 445 (712)
T ss_pred CCcEeecccccceEEeecCcCeeE
Confidence 999999999999999999865544
No 468
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.70 E-value=7.6e-16 Score=145.10 Aligned_cols=200 Identities=16% Similarity=0.163 Sum_probs=154.3
Q ss_pred CCCCcccccccCCCCCCCCccccCCC-------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EE-
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNERS-------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VK- 556 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~~-------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~- 556 (712)
-|+....|.+|||+|+.++..++++- ..+.+++.-|.+.+..+.|+.+...+-..+.+...+. .+
T Consensus 87 hhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy 166 (350)
T KOG0641|consen 87 HHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIY 166 (350)
T ss_pred ccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEE
Confidence 46778899999999998877665542 3577888889999999999988777665555544433 22
Q ss_pred -EEccCCc----eecCCCCeeEE-EEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 557 -ADLNQGD----LLNSSNLVCSL-SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 557 -~dl~~~~----~~~h~~~V~~i-~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
-|...|. +.+|.+.|.++ +| .+-+|++|+.|++|+.||++...+.........-.--..+.|.+|+..| .+
T Consensus 167 ~tdc~~g~~~~a~sghtghilalysw--n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp-sg 243 (350)
T KOG0641|consen 167 ITDCGRGQGFHALSGHTGHILALYSW--NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP-SG 243 (350)
T ss_pred EeecCCCCcceeecCCcccEEEEEEe--cCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECC-Cc
Confidence 3444443 45799999886 45 6889999999999999999853221111000000011247799999999 69
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
.+|++|-.|....+||+|-+..++.|.-|+..|.||.|+| ...++.+||.|.+|++=|+. |...
T Consensus 244 rll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp-~a~yllt~syd~~ikltdlq-gdla 307 (350)
T KOG0641|consen 244 RLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSP-GAHYLLTCSYDMKIKLTDLQ-GDLA 307 (350)
T ss_pred ceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCC-CceEEEEecccceEEEeecc-cchh
Confidence 9999999999999999999999999999999999999998 88999999999999999986 4443
No 469
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.69 E-value=7.2e-17 Score=175.46 Aligned_cols=154 Identities=16% Similarity=0.311 Sum_probs=130.4
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEEEEccC---Cc----eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCcccc
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVKADLNQ---GD----LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINE 603 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~---~~----~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~ 603 (712)
..+.| +.+.+++++.++-++-.++||+.- .. +..|...|.++.|++ ..++|++||.||+||+||++.-
T Consensus 91 ~DVkW-~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~--- 166 (839)
T KOG0269|consen 91 ADVKW-GQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSK--- 166 (839)
T ss_pred hhccc-ccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecc---
Confidence 35677 677888888888777777899975 22 235999999999998 6789999999999999999861
Q ss_pred CcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECC
Q 005147 604 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDD 682 (712)
Q Consensus 604 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D 682 (712)
+ ...+..+....|..|.|+|..++.|+++...|.+++||+|.. ++...+.+|.++|.|+.||| ++.+|||||.|
T Consensus 167 --~--S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhP-nr~~lATGGRD 241 (839)
T KOG0269|consen 167 --K--SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHP-NREWLATGGRD 241 (839)
T ss_pred --c--ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecC-CCceeeecCCC
Confidence 1 122334466779999999999999999999999999999976 68889999999999999999 99999999999
Q ss_pred CcEEEEeCCCCc
Q 005147 683 GSVKLWSINQAI 694 (712)
Q Consensus 683 ~~v~lWd~~~~~ 694 (712)
+.|+|||..++.
T Consensus 242 K~vkiWd~t~~~ 253 (839)
T KOG0269|consen 242 KMVKIWDMTDSR 253 (839)
T ss_pred ccEEEEeccCCC
Confidence 999999998544
No 470
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.69 E-value=1.8e-16 Score=164.51 Aligned_cols=208 Identities=17% Similarity=0.305 Sum_probs=156.3
Q ss_pred HHHHHHHhhccCCCCCCCCCcccccccCCCCCCC---------CccccCCCCCCceeeccCCCccc-eecccCCCCCCcE
Q 005147 476 KLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTS---------KPLVNERSSINNLGSKEGYSEGR-RSGWINPFLEGLC 545 (712)
Q Consensus 476 ~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~~~~~~~~~~~~~~l~gh~~~~~-~~~~~~~~~~~~~ 545 (712)
.|.+.|=..++.+.+.+|+.-|+.+.|+.+|+.. .++.+|.. ....+.|.+.+. .+.+ .|.. ..+
T Consensus 240 klW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG---~~~~~f~~~~~~~cvkf-~pd~-~n~ 314 (503)
T KOG0282|consen 240 KLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETG---QVLSRFHLDKVPTCVKF-HPDN-QNI 314 (503)
T ss_pred EEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccc---eEEEEEecCCCceeeec-CCCC-CcE
Confidence 4566677777888899999999999999999853 22334432 123334444332 3334 3333 255
Q ss_pred EEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC----cccc-cc-----
Q 005147 546 KYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----RDIH-YP----- 610 (712)
Q Consensus 546 ~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~----~~~~-~~----- 610 (712)
.+...++.+++ ||+++++++ .|.+.|.+|.|-+++..|++++.|++++||+.+....-. ...+ +|
T Consensus 315 fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~ 394 (503)
T KOG0282|consen 315 FLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLH 394 (503)
T ss_pred EEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecC
Confidence 66667777777 999999877 489999999999999999999999999999998621000 0000 00
Q ss_pred -----------------------------eEEecCC--CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC
Q 005147 611 -----------------------------VVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH 659 (712)
Q Consensus 611 -----------------------------~~~~~~~--~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H 659 (712)
....+|. +.-..|.|+| ++.+|++|+.||.|.+||.++-+.+..+.+|
T Consensus 395 P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSp-DG~~l~SGdsdG~v~~wdwkt~kl~~~lkah 473 (503)
T KOG0282|consen 395 PNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSP-DGRTLCSGDSDGKVNFWDWKTTKLVSKLKAH 473 (503)
T ss_pred CCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcC-CCCeEEeecCCccEEEeechhhhhhhccccC
Confidence 0001222 2235689999 6999999999999999999999999999999
Q ss_pred CCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 660 ~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
+++|..++|+|...+.+||||.||.|++||
T Consensus 474 ~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 474 DQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999999999999999999997
No 471
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.69 E-value=8.7e-15 Score=149.99 Aligned_cols=171 Identities=19% Similarity=0.209 Sum_probs=131.8
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD 596 (712)
..+++||+..+..+.+ ++..+-. ...+.+....+|...... ..-|..+|+.+..+|.|+||++++.|++....|
T Consensus 254 l~~~~Gh~kki~~v~~-~~~~~~v-~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd 331 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKF-HKDLDTV-ITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSD 331 (506)
T ss_pred hhhccCcceEEEEEEe-ccchhhe-eecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEE
Confidence 3578888877766655 3333322 222222222336554332 235899999999999999999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
++++.+ ...+......-.+++..||| |+.+|++|..||.|+|||+.++..+..|.+|+++|.+|+|+ .+|-+|
T Consensus 332 ~~~g~~-----lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~Fs-ENGY~L 404 (506)
T KOG0289|consen 332 ISSGSQ-----LTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFS-ENGYWL 404 (506)
T ss_pred ccCCcE-----EEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEec-cCceEE
Confidence 987422 11111113345689999999 69999999999999999999999999999999999999999 599999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEe
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|++++|+.|++||+|..+.+.++.
T Consensus 405 at~add~~V~lwDLRKl~n~kt~~ 428 (506)
T KOG0289|consen 405 ATAADDGSVKLWDLRKLKNFKTIQ 428 (506)
T ss_pred EEEecCCeEEEEEehhhcccceee
Confidence 999999999999999888776664
No 472
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.69 E-value=1.2e-15 Score=159.54 Aligned_cols=215 Identities=14% Similarity=0.166 Sum_probs=164.2
Q ss_pred hhhhHhHHHHHHHhhccCCCCCCCCCcccccccCCCCCCCCccccCCC------CCCcee----eccCCCccceecccCC
Q 005147 470 LMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERS------SINNLG----SKEGYSEGRRSGWINP 539 (712)
Q Consensus 470 ~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~----l~gh~~~~~~~~~~~~ 539 (712)
+.+.+++++.+. .+-+|...++=+++||.|.+.+....... ...... ++--.+++..++|
T Consensus 42 ~ir~i~~~~~~~-------iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~W--- 111 (603)
T KOG0318|consen 42 IIRNIDNPASVD-------IYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISW--- 111 (603)
T ss_pred EEEECCCcccee-------eeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeeccccccccee---
Confidence 456677776632 46678778889999999998766654432 011122 2233467888999
Q ss_pred CCCCcEEEEEcCC-c---EEE-EEcc--CCceecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccce
Q 005147 540 FLEGLCKYLSFSK-L---RVK-ADLN--QGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (712)
Q Consensus 540 ~~~~~~~~~~~~~-~---~v~-~dl~--~~~~~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~ 611 (712)
..|+.-.++-++. . .+. ||-- .|++.||+..|+++.|-|..- .++|||.|++|.+|+=.-. .-..
T Consensus 112 d~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPF-------KFk~ 184 (603)
T KOG0318|consen 112 DFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPF-------KFKS 184 (603)
T ss_pred CCCCcEEEEEecCccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCe-------eeee
Confidence 4454433333332 1 233 7664 377889999999999998654 7999999999999985321 1122
Q ss_pred EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec---cCCCcEEEEEEecCCCCEEEEEECCCcEEEE
Q 005147 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR---EHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (712)
Q Consensus 612 ~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~---~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lW 688 (712)
....|..-|.||.|+| ++..|||++.||+|.|||-.+|..+..+. +|.+.|..++|+| |++.|+|+|.|.++|||
T Consensus 185 s~r~HskFV~~VRysP-DG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIW 262 (603)
T KOG0318|consen 185 SFREHSKFVNCVRYSP-DGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSP-DSTQFLTVSADKTIKIW 262 (603)
T ss_pred cccccccceeeEEECC-CCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECC-CCceEEEecCCceEEEE
Confidence 3446788899999999 59999999999999999999999999998 8999999999999 99999999999999999
Q ss_pred eCCCCcEEEEEecee
Q 005147 689 SINQAILLLHLVDVS 703 (712)
Q Consensus 689 d~~~~~~v~~~~~~~ 703 (712)
|+.+.+++.++..+.
T Consensus 263 dVs~~slv~t~~~~~ 277 (603)
T KOG0318|consen 263 DVSTNSLVSTWPMGS 277 (603)
T ss_pred EeeccceEEEeecCC
Confidence 999999998887654
No 473
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.68 E-value=4.1e-16 Score=149.25 Aligned_cols=149 Identities=14% Similarity=0.286 Sum_probs=117.5
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCC
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 617 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~ 617 (712)
+...|.++.+|...+|++...++ ...+.|+.++..|++.+||+|+ ...|++||+++. .........+|.
T Consensus 15 sA~YDhTIRfWqa~tG~C~rTiq-----h~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~-----np~Pv~t~e~h~ 83 (311)
T KOG0315|consen 15 SAGYDHTIRFWQALTGICSRTIQ-----HPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSN-----NPNPVATFEGHT 83 (311)
T ss_pred eccCcceeeeeehhcCeEEEEEe-----cCccceeeEEEcCCcchhhhcc-CCeeEEEEccCC-----CCCceeEEeccC
Confidence 33444444444444444433322 2378899999999999999987 478999999872 223334566888
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
..|++|.|.- ++.+++|||.||+|+|||+|...+-+.|. |..+|++|..+| +...|++|..+|.|++||++...+..
T Consensus 84 kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c~~ 160 (311)
T KOG0315|consen 84 KNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGENSCTH 160 (311)
T ss_pred CceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecC-CcceEEeecCCCcEEEEEccCCcccc
Confidence 9999999996 79999999999999999999988877776 779999999998 88899999999999999999876655
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
.++
T Consensus 161 ~li 163 (311)
T KOG0315|consen 161 ELI 163 (311)
T ss_pred ccC
Confidence 443
No 474
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.68 E-value=5.8e-16 Score=170.92 Aligned_cols=171 Identities=15% Similarity=0.257 Sum_probs=143.6
Q ss_pred CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee---cCCCCeeEEEEcC-CCCEEEEEeCCCcE
Q 005147 517 SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL---NSSNLVCSLSFDR-DGELFAAAGVNKKI 592 (712)
Q Consensus 517 ~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~---~h~~~V~~i~f~~-~~~~lat~~~d~~I 592 (712)
+..|...++||.++|..++| +..+++..++-|+...+|.+...+++ .|.+.|+||+|+| |.++|++|+-|++|
T Consensus 358 ~ekP~~ef~GHt~DILDlSW---SKn~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 358 SEKPFCEFKGHTADILDLSW---SKNNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred cccchhhhhccchhheeccc---ccCCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccce
Confidence 35688899999999999999 88999999999988888999877655 6999999999999 88899999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec--cC------CCcEE
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR--EH------ERRVW 664 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~--~H------~~~v~ 664 (712)
+||.+.. ...+.-.....-|+++||.| +|...+.|+++|.+++|++...+....+. .| .++|+
T Consensus 435 RiWsI~d--------~~Vv~W~Dl~~lITAvcy~P-dGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rIT 505 (712)
T KOG0283|consen 435 RLWSISD--------KKVVDWNDLRDLITAVCYSP-DGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRIT 505 (712)
T ss_pred EEeecCc--------CeeEeehhhhhhheeEEecc-CCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceee
Confidence 9999954 22233334567899999999 59999999999999999999877665542 12 23899
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 665 SIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 665 sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.+.|.|.+...++..|.|..|+|+|.++...+..+
T Consensus 506 G~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~Kf 540 (712)
T KOG0283|consen 506 GLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKF 540 (712)
T ss_pred eeEecCCCCCeEEEecCCCceEEEeccchhhhhhh
Confidence 99999988887888899999999999876665444
No 475
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.68 E-value=1.7e-16 Score=172.65 Aligned_cols=173 Identities=14% Similarity=0.166 Sum_probs=143.8
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFE 596 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD 596 (712)
..+.+|...+..++| +++...++...+-|....+||++..+ +.+.+..|.+|.|+| .++.|+++.+.|.+.+||
T Consensus 127 ~~f~EH~Rs~~~ldf-h~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWD 205 (839)
T KOG0269|consen 127 TVFNEHERSANKLDF-HSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWD 205 (839)
T ss_pred hHhhhhccceeeeee-ccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEee
Confidence 478899999999999 88888887777777666679998654 345688999999999 678999999999999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE--EEEeccCCCcEEEEEEecCCCC
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV--LTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~--~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
+|-. ..+.+...+|.++|.|+.||| ++.+|||||.|++|+|||..++.. +.+.. -..+|.+|.|-|....
T Consensus 206 lRqp------~r~~~k~~AH~GpV~c~nwhP-nr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 206 LRQP------DRCEKKLTAHNGPVLCLNWHP-NREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSY 277 (839)
T ss_pred ccCc------hhHHHHhhcccCceEEEeecC-CCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeeccCccc
Confidence 9742 134456779999999999999 799999999999999999987643 33333 3579999999998889
Q ss_pred EEEEEEC--CCcEEEEeCCCCcEEEEEecee
Q 005147 675 LLASGSD--DGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 675 ~l~sgs~--D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
.||++|. |..|+|||++..-..+..+..|
T Consensus 278 hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH 308 (839)
T KOG0269|consen 278 HLATCSMVVDTSVHVWDVRRPYIPYATFLEH 308 (839)
T ss_pred hhhhhhccccceEEEEeeccccccceeeecc
Confidence 9999985 9999999999877666666544
No 476
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.68 E-value=3.2e-16 Score=162.92 Aligned_cols=163 Identities=22% Similarity=0.277 Sum_probs=128.4
Q ss_pred ccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc
Q 005147 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (712)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~ 605 (712)
.+..++| +|....-.++++.-.. -++...+.. +..-...|++++|..||.+||+|...|.|+|||+.+ +
T Consensus 28 ~vssl~f-sp~~P~d~aVt~S~rv-qly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~-----r 100 (487)
T KOG0310|consen 28 SVSSLCF-SPKHPYDFAVTSSVRV-QLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS-----R 100 (487)
T ss_pred cceeEec-CCCCCCceEEecccEE-EEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc-----H
Confidence 3455666 5555544444443222 224444322 223478999999999999999999999999999754 1
Q ss_pred ccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcE
Q 005147 606 DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSV 685 (712)
Q Consensus 606 ~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v 685 (712)
. ......+|+.+|..+.|+|+++..|++|+.|+.+++||+.+......+.+|++.|.|.+|+|.++++++|||.||+|
T Consensus 101 ~--iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~v 178 (487)
T KOG0310|consen 101 V--ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKV 178 (487)
T ss_pred H--HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceE
Confidence 1 12345689999999999999999999999999999999999988778999999999999999999999999999999
Q ss_pred EEEeCCCC-cEEEEEec
Q 005147 686 KLWSINQA-ILLLHLVD 701 (712)
Q Consensus 686 ~lWd~~~~-~~v~~~~~ 701 (712)
++||+++. ..+.++..
T Consensus 179 rl~DtR~~~~~v~elnh 195 (487)
T KOG0310|consen 179 RLWDTRSLTSRVVELNH 195 (487)
T ss_pred EEEEeccCCceeEEecC
Confidence 99999987 55555543
No 477
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.68 E-value=3.8e-16 Score=153.44 Aligned_cols=125 Identities=19% Similarity=0.418 Sum_probs=106.8
Q ss_pred CCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE
Q 005147 567 SSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (712)
Q Consensus 567 h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw 645 (712)
..+.|.+|+|+| ...+++++|+|++||+||+... ....+.....|.++|.+++|+. +++.+++|+.|+.+++|
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-----g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS-----GQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLW 99 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecC-----CcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEE
Confidence 478899999999 5567779999999999999651 2233455678899999999997 69999999999999999
Q ss_pred ECCCCcEEEEeccCCCcEEEEEEecCCC--CEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 646 DVSRSQVLTEMREHERRVWSIDFSSADP--TLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 646 D~~~~~~~~~~~~H~~~v~sv~fsp~~~--~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|+.+++. .++..|.++|.++.|-+ .. ..|+|||.|.+||.||+|+..++.++
T Consensus 100 DL~S~Q~-~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~ 153 (347)
T KOG0647|consen 100 DLASGQV-SQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTRSSNPVATL 153 (347)
T ss_pred EccCCCe-eeeeecccceeEEEEec-CCCcceeEecccccceeecccCCCCeeeee
Confidence 9999964 46777999999999986 33 48999999999999999998888765
No 478
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.67 E-value=2e-16 Score=155.66 Aligned_cols=186 Identities=18% Similarity=0.279 Sum_probs=152.5
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+.||.+.+..+.- ......+..++.+....+|.+.+|.|+ ||.+.|++|.|++.+.+++||+.|++.+||...
T Consensus 143 e~~GHkDGiW~Vaa--~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~a 220 (481)
T KOG0300|consen 143 ELEGHKDGIWHVAA--DSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAA 220 (481)
T ss_pred hhcccccceeeehh--hcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHh
Confidence 46799888866655 223346777778888888999988765 899999999999999999999999999999832
Q ss_pred C----cc------------cc-------------Ccc---cccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE
Q 005147 599 A----II------------NE-------------NRD---IHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (712)
Q Consensus 599 ~----~~------------~~-------------~~~---~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw 645 (712)
- .. .+ ..+ +..|+ ...+|.+.|.+..|-. .+..++++++|.+..+|
T Consensus 221 v~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlw 299 (481)
T KOG0300|consen 221 VNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLW 299 (481)
T ss_pred hcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc-Ccceeeeeeccccceee
Confidence 1 00 00 011 11222 3458999999999987 58999999999999999
Q ss_pred ECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEeceeeccCceeeC
Q 005147 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVSFETKRTTVI 712 (712)
Q Consensus 646 D~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~~~~~~~~~ 712 (712)
|+.+|.++..+.+|....+.++-+| ...+++++|.|.+.++||++..-.-...+++|.++..+++|
T Consensus 300 DVEtge~v~~LtGHd~ELtHcstHp-tQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF 365 (481)
T KOG0300|consen 300 DVETGEVVNILTGHDSELTHCSTHP-TQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF 365 (481)
T ss_pred eeccCceeccccCcchhccccccCC-cceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE
Confidence 9999999999999999999999998 88999999999999999999666666778999999888775
No 479
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=9.5e-17 Score=173.24 Aligned_cols=167 Identities=20% Similarity=0.261 Sum_probs=142.0
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
.+.+.|.||.+.+..+.+ .+.+.++.....+....+||+..++ +.+|...+.++.|+|.+.++|+|+.|+.+++
T Consensus 61 ~~i~S~~~hespIeSl~f--~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~i 138 (825)
T KOG0267|consen 61 NAITSLTGHESPIESLTF--DTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKI 138 (825)
T ss_pred chhheeeccCCcceeeec--CcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccccccccee
Confidence 455678999999999998 3456665555555455559998765 6689999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
||.+.. .+.....+|...|.++.|+| ++.++++|+.|.+|+|||+..|+.+.+|..|+..|.++.|+| ..-
T Consensus 139 wD~Rk~-------Gc~~~~~s~~~vv~~l~lsP-~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp-~e~ 209 (825)
T KOG0267|consen 139 WDIRKK-------GCSHTYKSHTRVVDVLRLSP-DGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHP-LEV 209 (825)
T ss_pred hhhhcc-------CceeeecCCcceeEEEeecC-CCceeeccCCcceeeeecccccccccccccccccccccccCc-hhh
Confidence 999742 23344556888899999999 599999999999999999999999999999999999999998 778
Q ss_pred EEEEEECCCcEEEEeCCCCcEE
Q 005147 675 LLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v 696 (712)
++++||.|++|++||+++-..+
T Consensus 210 Lla~Gs~d~tv~f~dletfe~I 231 (825)
T KOG0267|consen 210 LLAPGSSDRTVRFWDLETFEVI 231 (825)
T ss_pred hhccCCCCceeeeeccceeEEe
Confidence 9999999999999999864443
No 480
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.67 E-value=7.3e-16 Score=158.50 Aligned_cols=162 Identities=16% Similarity=0.268 Sum_probs=141.9
Q ss_pred ccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCC
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDA 599 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~ 599 (712)
.||++.|..+.| +....+.++..+.++..++||+.+|++. .|...|.+++|+| .+.+|++|+.|++|.++|+|.
T Consensus 240 ~gHTdavl~Ls~-n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 240 SGHTDAVLALSW-NRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred ccchHHHHHHHh-ccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 489999999999 8888889888888888888999988754 5899999999999 567999999999999999985
Q ss_pred ccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
..+. -....-.+.|-.|.|+|...+.++++..||+|+-+|+|+. ++++++.+|.++|.++++++..+.+++|
T Consensus 319 ~~~s-------~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t 391 (463)
T KOG0270|consen 319 PSNS-------GKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLST 391 (463)
T ss_pred cccc-------CceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceee
Confidence 2221 1234446789999999998899999999999999999986 9999999999999999999989999999
Q ss_pred EECCCcEEEEeCCCCc
Q 005147 679 GSDDGSVKLWSINQAI 694 (712)
Q Consensus 679 gs~D~~v~lWd~~~~~ 694 (712)
+|.|+.|++|++....
T Consensus 392 ~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 392 ASTDKVVKLWKFDVDS 407 (463)
T ss_pred ccccceEEEEeecCCC
Confidence 9999999999986433
No 481
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.67 E-value=6.5e-16 Score=150.89 Aligned_cols=161 Identities=20% Similarity=0.362 Sum_probs=137.5
Q ss_pred cCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC-------ceecCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEc
Q 005147 526 EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-------DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 526 gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~-------~~~~h~~~V~~i~f~~~~-~~lat~~~d~~I~iwD~ 597 (712)
.+.++..+.+| +.....++...+.++...+|++.++ .++.|...|.+|+|..++ +.||++|.||.|++||+
T Consensus 148 ~~~aPlTSFDW-ne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDL 226 (364)
T KOG0290|consen 148 EFCAPLTSFDW-NEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDL 226 (364)
T ss_pred ccCCccccccc-ccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEe
Confidence 45566778899 8888899999999999999999986 266899999999999965 59999999999999999
Q ss_pred CCccccCcccccceEEecC-CCCeEEEEEcCCCCCEEEEEeCCC-cEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCC
Q 005147 598 DAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEG-VVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~p~~~~~lasgs~Dg-~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
+. .+|..+ +.+... ..++..++|++++.+++||-..|. .|.|-|+|.. .++..+.+|.+.|+.|+|.|+...
T Consensus 227 R~--leHSTI---IYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~ 301 (364)
T KOG0290|consen 227 RS--LEHSTI---IYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSS 301 (364)
T ss_pred cc--cccceE---EecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCc
Confidence 86 233322 223333 678899999999999999987765 6999999986 689999999999999999999999
Q ss_pred EEEEEECCCcEEEEeCCC
Q 005147 675 LLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~ 692 (712)
.|+||++|+.+-+||+.+
T Consensus 302 hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 302 HICTAGDDCQALIWDLQQ 319 (364)
T ss_pred eeeecCCcceEEEEeccc
Confidence 999999999999999976
No 482
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.66 E-value=6.9e-15 Score=150.92 Aligned_cols=199 Identities=22% Similarity=0.268 Sum_probs=153.2
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
+.+|...+++..|+++|..++....+. ...+...+.+|...+..+.| .+.. ..+.+.+.+....+|++..
T Consensus 5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~l~~~~~~~~i~i~~~~~ 82 (289)
T cd00200 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAA-SADG-TYLASGSSDKTIRLWDLET 82 (289)
T ss_pred hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEE-CCCC-CEEEEEcCCCeEEEEEcCc
Confidence 346778899999999987663332221 11244667889888878888 2222 2444444444444599886
Q ss_pred Cc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
+. +..|...|.++.|++++.++++++.|+.|++||+++. ........|...+.+++|+|. +.++++++
T Consensus 83 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~ 154 (289)
T cd00200 83 GECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG-------KCLTTLRGHTDWVNSVAFSPD-GTFVASSS 154 (289)
T ss_pred ccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc-------EEEEEeccCCCcEEEEEEcCc-CCEEEEEc
Confidence 43 3357889999999999899999888999999999742 112223367889999999994 88888888
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.||.|.+||+++++.+..+..|...|++++|+| ++..+++++.|+.|++||+++++.+..+
T Consensus 155 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~~~~~~ 215 (289)
T cd00200 155 QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSP-DGEKLLSSSSDGTIKLWDLSTGKCLGTL 215 (289)
T ss_pred CCCcEEEEEccccccceeEecCccccceEEECC-CcCEEEEecCCCcEEEEECCCCceecch
Confidence 899999999999999999999999999999998 8888999999999999999987776654
No 483
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.66 E-value=1.6e-15 Score=144.03 Aligned_cols=166 Identities=20% Similarity=0.261 Sum_probs=141.1
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
.-.+.+|.+++....+ ..+|.-.++.+++..++ |+...|.++ +|...|.+++.+.|...|++||.|+.|.+|
T Consensus 10 ~~~l~~~qgaV~avry---N~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vw 86 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRY---NVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVW 86 (307)
T ss_pred ceeecccccceEEEEE---ccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEE
Confidence 3456788888888888 77888888888877776 888877665 799999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCcEEEEEEecCCC
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS--QVLTEMREHERRVWSIDFSSADP 673 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~--~~~~~~~~H~~~v~sv~fsp~~~ 673 (712)
|+.++. ......+|.++|+.|.||- ....+++|+.|.++++||.|+. +|++.+.+-.+.|.+|+.+ +
T Consensus 87 DV~TGk-------v~Rr~rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~---~ 155 (307)
T KOG0316|consen 87 DVNTGK-------VDRRFRGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA---E 155 (307)
T ss_pred EcccCe-------eeeecccccceeeEEEecC-cceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec---c
Confidence 998742 2334568999999999997 6899999999999999999875 6899998888999999986 5
Q ss_pred CEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 674 TLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 674 ~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.|+.||.||+++.||+|.|....-++
T Consensus 156 heIvaGS~DGtvRtydiR~G~l~sDy~ 182 (307)
T KOG0316|consen 156 HEIVAGSVDGTVRTYDIRKGTLSSDYF 182 (307)
T ss_pred cEEEeeccCCcEEEEEeecceeehhhc
Confidence 789999999999999999887654443
No 484
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.65 E-value=2e-15 Score=168.45 Aligned_cols=161 Identities=19% Similarity=0.249 Sum_probs=136.4
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+.||.+.+.++.+. ..+..+...+.|....+||..+|.+. +|.+.|.++... +..+++|+.|.+|++|++.
T Consensus 244 ~l~GH~g~V~~l~~~--~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~ 319 (537)
T KOG0274|consen 244 RLVGHFGGVWGLAFP--SGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVT 319 (537)
T ss_pred eccCCCCCceeEEEe--cCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEecc
Confidence 388999999999993 25677777777777777999988765 699999999874 4588889999999999997
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
++ .+.....+|...|.||..+ ++++++|++||+|++||++++++++++.+|+.+|.++.+.+ . ..+++
T Consensus 320 n~-------~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~-~-~~~~S 387 (537)
T KOG0274|consen 320 NG-------ACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDS-E-NRLLS 387 (537)
T ss_pred Cc-------ceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecC-c-ceEEe
Confidence 42 2223344599999999997 68999999999999999999999999999999999998874 3 99999
Q ss_pred EECCCcEEEEeCCCC-cEEEEE
Q 005147 679 GSDDGSVKLWSINQA-ILLLHL 699 (712)
Q Consensus 679 gs~D~~v~lWd~~~~-~~v~~~ 699 (712)
||.|++|++||+++. +++.++
T Consensus 388 gs~D~~IkvWdl~~~~~c~~tl 409 (537)
T KOG0274|consen 388 GSLDTTIKVWDLRTKRKCIHTL 409 (537)
T ss_pred eeeccceEeecCCchhhhhhhh
Confidence 999999999999998 676544
No 485
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.65 E-value=1.5e-15 Score=166.78 Aligned_cols=176 Identities=14% Similarity=0.181 Sum_probs=137.2
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
-.++|.||-+=|..+.| ..-.. .+..++.|....+|+.+++++ .||...|.|..|+|..+++++||.|.+|+||
T Consensus 85 clftL~GHlDYVRt~~F-HheyP-WIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVW 162 (1202)
T KOG0292|consen 85 CLFTLLGHLDYVRTVFF-HHEYP-WILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVW 162 (1202)
T ss_pred ehhhhccccceeEEeec-cCCCc-eEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEE
Confidence 35788899888887777 22222 223333333334466666554 3899999999999999999999999999999
Q ss_pred EcCCccccC----------------------cccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc--
Q 005147 596 ECDAIINEN----------------------RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-- 651 (712)
Q Consensus 596 D~~~~~~~~----------------------~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~-- 651 (712)
|+......+ .+.....+.-+|...|+.++|+| +-.+|+||+.|..|++|-...-+
T Consensus 163 DisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhp-TlpliVSG~DDRqVKlWrmnetKaW 241 (1202)
T KOG0292|consen 163 DISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHP-TLPLIVSGADDRQVKLWRMNETKAW 241 (1202)
T ss_pred eecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecC-CcceEEecCCcceeeEEEeccccce
Confidence 997521111 11112234568999999999999 68899999999999999987654
Q ss_pred EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 652 VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 652 ~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.+-+..+|...|.|+-|+| ..++++|.|.|++|+|||+....++.++
T Consensus 242 EvDtcrgH~nnVssvlfhp-~q~lIlSnsEDksirVwDm~kRt~v~tf 288 (1202)
T KOG0292|consen 242 EVDTCRGHYNNVSSVLFHP-HQDLILSNSEDKSIRVWDMTKRTSVQTF 288 (1202)
T ss_pred eehhhhcccCCcceEEecC-ccceeEecCCCccEEEEecccccceeee
Confidence 3667889999999999998 8899999999999999999999998876
No 486
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.65 E-value=1.5e-14 Score=148.43 Aligned_cols=167 Identities=25% Similarity=0.333 Sum_probs=135.1
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+++|.+.+..+.| ++. ...+.+.+.+....+|++..+. +..|...+.++.|+|++++|++++.|+.|++||+.
T Consensus 4 ~~~~h~~~i~~~~~-~~~-~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 4 TLKGHTGGVTCVAF-SPD-GKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE 81 (289)
T ss_pred HhcccCCCEEEEEE-cCC-CCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 56799999999999 332 2333444434333449988653 34688899999999999999999999999999997
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
.. ........|...+.+++|+|. +.++++++.||.|.+||+++++.+..+..|...|.+++|+| ++.++++
T Consensus 82 ~~-------~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 152 (289)
T cd00200 82 TG-------ECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP-DGTFVAS 152 (289)
T ss_pred cc-------cceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC-cCCEEEE
Confidence 52 122334467789999999994 78898888899999999999999999999999999999998 6889999
Q ss_pred EECCCcEEEEeCCCCcEEEEEe
Q 005147 679 GSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 679 gs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++.|+.|++||+++++.+..+.
T Consensus 153 ~~~~~~i~i~d~~~~~~~~~~~ 174 (289)
T cd00200 153 SSQDGTIKLWDLRTGKCVATLT 174 (289)
T ss_pred EcCCCcEEEEEccccccceeEe
Confidence 9889999999999887765544
No 487
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.65 E-value=1.1e-15 Score=150.33 Aligned_cols=182 Identities=16% Similarity=0.228 Sum_probs=143.1
Q ss_pred ccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc------------CC----------ceecCCC
Q 005147 513 VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN------------QG----------DLLNSSN 569 (712)
Q Consensus 513 ~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~------------~~----------~~~~h~~ 569 (712)
++|.+.-....+..|.+++..-.| +.||.+..+..-+..++ .|+. .| ++-.|.+
T Consensus 97 s~e~~~yEt~ylt~HK~~cR~aaf---s~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~d 173 (430)
T KOG0640|consen 97 SPEPSEYETKYLTSHKSPCRAAAF---SPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVD 173 (430)
T ss_pred CCCCcccceEEEeecccceeeeee---CCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccC
Confidence 344444566889999999988888 67777666654444433 5553 11 1224799
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~ 649 (712)
.|+++.|+|...+|++|+.|++||+||+... ..+.....+.....|.|++||| .|.+|+.|..-.++++||+.+
T Consensus 174 evn~l~FHPre~ILiS~srD~tvKlFDfsK~-----saKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T 247 (430)
T KOG0640|consen 174 EVNDLDFHPRETILISGSRDNTVKLFDFSKT-----SAKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNT 247 (430)
T ss_pred cccceeecchhheEEeccCCCeEEEEecccH-----HHHHHHHHhhccceeeeEeecC-CCceEEEecCCCceeEEeccc
Confidence 9999999999999999999999999999752 1222223344567899999999 699999999999999999999
Q ss_pred CcEEEEe---ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEeceee
Q 005147 650 SQVLTEM---REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDVSF 704 (712)
Q Consensus 650 ~~~~~~~---~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~~ 704 (712)
-+|...- ..|++.|++|.+++ .+++.++||.||.|+|||--++.|+.++-..|-
T Consensus 248 ~QcfvsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~ 304 (430)
T KOG0640|consen 248 YQCFVSANPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG 304 (430)
T ss_pred eeEeeecCcccccccceeEEEecC-CccEEEEeccCCcEEeeccccHHHHHHHHhhcC
Confidence 9987664 46999999999997 999999999999999999888888877665443
No 488
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.64 E-value=1.1e-14 Score=140.79 Aligned_cols=209 Identities=15% Similarity=0.158 Sum_probs=145.1
Q ss_pred CCCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEc
Q 005147 488 PVKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559 (712)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl 559 (712)
+.+.||-.-.+-++++.+|..+=.+..+. .-.-.-+..||++.|..++. + .....+...+.+....+||+
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Di-d-~~s~~liTGSAD~t~kLWDv 81 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDI-D-WDSKHLITGSADQTAKLWDV 81 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEe-c-CCcceeeeccccceeEEEEc
Confidence 34556666666667777776541111111 01122366789988877654 1 12223333344444455666
Q ss_pred cCCceec---CCCCeeEEEEcCCCCEEEEEeC-----CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCC
Q 005147 560 NQGDLLN---SSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631 (712)
Q Consensus 560 ~~~~~~~---h~~~V~~i~f~~~~~~lat~~~-----d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 631 (712)
++|+.+. ...+|..+.|+++|++++.+.. .+.|.+||++..........+......+.++++..-|.| -+.
T Consensus 82 ~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~-l~~ 160 (327)
T KOG0643|consen 82 ETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP-LGE 160 (327)
T ss_pred CCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc-cCC
Confidence 6666553 3678889999998887777643 467889998743221112222233445678999999999 489
Q ss_pred EEEEEeCCCcEEEEECCCCc-EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 632 QIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 632 ~lasgs~Dg~V~lwD~~~~~-~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|++|..||.|.+||+++|+ .+..-+.|+..|+.++|+| |..++++||.|.+-++||.++-..+.++.
T Consensus 161 ~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~-d~T~FiT~s~Dttakl~D~~tl~v~Kty~ 229 (327)
T KOG0643|consen 161 TIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSR-DRTYFITGSKDTTAKLVDVRTLEVLKTYT 229 (327)
T ss_pred EEEEecCCCcEEEEEcccCceeeechhhhccccccccccC-CcceEEecccCccceeeeccceeeEEEee
Confidence 99999999999999999984 5666688999999999997 99999999999999999999988887764
No 489
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=3.7e-16 Score=177.09 Aligned_cols=209 Identities=20% Similarity=0.207 Sum_probs=139.3
Q ss_pred ccceeeccCCCCCcccc-cccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~-~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...+ .+|-.|+|-- +. .....+|++ ++=...++..+. ++... +.+++|+|+-||+|
T Consensus 108 rqrfa~-kiNkq~lilRnil-----t~a~npfvv------gDc~tllk~~g~-lPvdm--------vla~Eylh~ygivh 166 (1205)
T KOG0606|consen 108 RQRFAM-KINKQNLILRNIL-----TFAGNPFVV------GDCATLLKNIGP-LPVDM--------VLAVEYLHSYGIVH 166 (1205)
T ss_pred ccchhh-cccccchhhhccc-----cccCCccee------chhhhhcccCCC-Ccchh--------hHHhHhhccCCeec
Confidence 666666 6666665432 11 223334444 344454544332 44433 78999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
||+||+|.+|..-|++|+.|||+.+.-...- .++.
T Consensus 167 rdlkpdnllIT~mGhiKlTDfgLsk~GLms~----------------------------------------atnl----- 201 (1205)
T KOG0606|consen 167 RDLKPDNLLITSMGHIKLTDFGLSKKGLMSL----------------------------------------ATNL----- 201 (1205)
T ss_pred CCCCCCcceeeecccccccchhhhhhhhhhc----------------------------------------cchh-----
Confidence 9999999999999999999999885321110 0000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
-+...+. ..+.|. ....+||+.|+|||++....|+..+|+|++|+++||.
T Consensus 202 --------------~eg~I~k--------------~t~Ef~--dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeF 251 (1205)
T KOG0606|consen 202 --------------KEGHIEK--------------DTHEFQ--DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 251 (1205)
T ss_pred --------------hhcchHH--------------HHHHhh--hccccCCccccChhhhhhhccCCCccHHHHHHHHHHH
Confidence 0000000 000000 0115899999999999999999999999999999998
Q ss_pred hC---CCCCChhhHHHHHhhcccC-CCchhhhcCchhHHHHHHcCCCCCCCCC---CHHHHhcCcCCCCCcCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRDS 331 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~eiL~hp~~~~~~~~ 331 (712)
+- ||+........-..+...+ +|.......++..++|.++|+.+|..|. .+-++.+|+||+.....
T Consensus 252 LVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 252 LVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred heeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 86 8887755443334444333 3444444556667999999999999995 57889999999987654
No 490
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.64 E-value=3.1e-15 Score=169.11 Aligned_cols=206 Identities=19% Similarity=0.246 Sum_probs=163.2
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC--------------------------CCCceeeccCCCccceecccCCCCCC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS--------------------------SINNLGSKEGYSEGRRSGWINPFLEG 543 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------------------~~~~~~l~gh~~~~~~~~~~~~~~~~ 543 (712)
...|...+.|+.||+||+++|.++.++. -.-..+|+||.++|..+.| +| .+.
T Consensus 65 m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~W-sp-~~~ 142 (942)
T KOG0973|consen 65 MDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNW-SP-DDS 142 (942)
T ss_pred eccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceecc-CC-Ccc
Confidence 4457789999999999998877654432 0124578999999999999 66 677
Q ss_pred cEEEEEcCCcEEEEEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCC
Q 005147 544 LCKYLSFSKLRVKADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 619 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~ 619 (712)
+++..+.+...++|+.++.+ +.+|.+.|-.+.|+|-|++|||-+.|++|+||++.+....+ .+..|..+..-...
T Consensus 143 ~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k-~It~pf~~~~~~T~ 221 (942)
T KOG0973|consen 143 LLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEK-SITKPFEESPLTTF 221 (942)
T ss_pred EEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeE-eeccchhhCCCcce
Confidence 77788888888889998765 34899999999999999999999999999999976522211 12334444444566
Q ss_pred eEEEEEcCCCCCEEEEEeC----CCcEEEEECCCCcEEEEeccCCCcEEEEEEecC----C--------CC----EEEEE
Q 005147 620 LSSICWNSYIKSQIASSNF----EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA----D--------PT----LLASG 679 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~----Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~----~--------~~----~l~sg 679 (712)
+..++|+| ||.+|++... -.++.|.+=.+.+.-..|-+|.++|.++.|+|. . ++ ++|+|
T Consensus 222 f~RlSWSP-DG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Avg 300 (942)
T KOG0973|consen 222 FLRLSWSP-DGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVG 300 (942)
T ss_pred eeecccCC-CcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEe
Confidence 88999999 6999999752 346888887777888899999999999999982 1 22 79999
Q ss_pred ECCCcEEEEeCCCCcEEEEE
Q 005147 680 SDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 680 s~D~~v~lWd~~~~~~v~~~ 699 (712)
|.|++|-||.....+++..+
T Consensus 301 SqDrSlSVW~T~~~RPl~vi 320 (942)
T KOG0973|consen 301 SQDRSLSVWNTALPRPLFVI 320 (942)
T ss_pred cCCccEEEEecCCCCchhhh
Confidence 99999999999988887553
No 491
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.64 E-value=1.7e-15 Score=143.87 Aligned_cols=121 Identities=23% Similarity=0.344 Sum_probs=109.0
Q ss_pred ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 565 ~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
-.+.++|..+.|+.||++.+|||.|++||+|+.-.+ .......+|...|..++.+. +...|++|+.|..|.+
T Consensus 14 ~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg-------~liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~v 85 (307)
T KOG0316|consen 14 DCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG-------ALIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQV 85 (307)
T ss_pred cccccceEEEEEccCCCEEEEcCCCceEEeeccccc-------ceeeeecCCCceeeeccccc-cccccccCCCCceEEE
Confidence 357899999999999999999999999999998542 33345668899999999886 6899999999999999
Q ss_pred EECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 645 wD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
||+.+|+.++.|.+|.+.|+.|.|+ .+...++|||.|.++++||.|+..
T Consensus 86 wDV~TGkv~Rr~rgH~aqVNtV~fN-eesSVv~SgsfD~s~r~wDCRS~s 134 (307)
T KOG0316|consen 86 WDVNTGKVDRRFRGHLAQVNTVRFN-EESSVVASGSFDSSVRLWDCRSRS 134 (307)
T ss_pred EEcccCeeeeecccccceeeEEEec-CcceEEEeccccceeEEEEcccCC
Confidence 9999999999999999999999999 489999999999999999998643
No 492
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.64 E-value=7.4e-15 Score=147.75 Aligned_cols=197 Identities=13% Similarity=0.099 Sum_probs=154.1
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCC--------CccceecccCCCCCCcEEEEEcCCcEEE-EEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY--------SEGRRSGWINPFLEGLCKYLSFSKLRVK-ADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~--------~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl 559 (712)
...+|+..|++..||-||..++...-+.. ...++..+ .++..+.|+.=...+.+.++...++.++ |.+
T Consensus 101 eltgHKDSVt~~~FshdgtlLATGdmsG~---v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~i 177 (399)
T KOG0296|consen 101 ELTGHKDSVTCCSFSHDGTLLATGDMSGK---VLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQI 177 (399)
T ss_pred EecCCCCceEEEEEccCceEEEecCCCcc---EEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence 46799999999999999998765533221 11111111 3566777877677888889999999998 988
Q ss_pred cCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc----------------------------
Q 005147 560 NQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI---------------------------- 607 (712)
Q Consensus 560 ~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~---------------------------- 607 (712)
.++. +.||...+++=.|.|+|+.++++..|++|++|++.++...+...
T Consensus 178 p~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~ 257 (399)
T KOG0296|consen 178 PSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVA 257 (399)
T ss_pred CCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccE
Confidence 8732 34899999999999999999999999999999998721000000
Q ss_pred -------------------c-----------------------------------------cceEEecCCCCeEEEEEcC
Q 005147 608 -------------------H-----------------------------------------YPVVEMASRSKLSSICWNS 627 (712)
Q Consensus 608 -------------------~-----------------------------------------~~~~~~~~~~~v~~v~~~p 627 (712)
+ .+.....|...|+.+.|-+
T Consensus 258 ~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~ 337 (399)
T KOG0296|consen 258 CGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN 337 (399)
T ss_pred EEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC
Confidence 0 0111224567788888876
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
..+|++++.+|.|++||.|+|+++.+|.+|...|.+++++| +.++++|+|+|++.+|+++.
T Consensus 338 --t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~-~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 338 --TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSP-QKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred --cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcC-CCcEEEEecCCCeEEEEecC
Confidence 57999999999999999999999999999999999999998 99999999999999999874
No 493
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.63 E-value=1.9e-15 Score=163.84 Aligned_cols=145 Identities=20% Similarity=0.352 Sum_probs=125.2
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCC
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 617 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~ 617 (712)
-+..+.++++.-.++.+..-. +-||.=+|.|+..+||+.+++|||.|++||||-++= +.|.....+|.
T Consensus 525 VsLLdnTVkVyflDtlKFfls-----LYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdF-------GDCHKS~fAHd 592 (888)
T KOG0306|consen 525 VSLLDNTVKVYFLDTLKFFLS-----LYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDF-------GDCHKSFFAHD 592 (888)
T ss_pred EEeccCeEEEEEecceeeeee-----ecccccceeEEeccCCcCeEEeccCCCceEEecccc-------chhhhhhhccc
Confidence 345667777777776665332 348999999999999999999999999999998853 34556778999
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
..|.+|.|-| ....+.|+|.||.|+-||...-..+.++.+|...|||++.+| +|.+++|+|.|.+|++|.-.....+
T Consensus 593 DSvm~V~F~P-~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~-~G~~vvs~shD~sIRlwE~tde~~~ 669 (888)
T KOG0306|consen 593 DSVMSVQFLP-KTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSP-NGSFVVSSSHDKSIRLWERTDEILI 669 (888)
T ss_pred CceeEEEEcc-cceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcC-CCCeEEeccCCceeEeeeccCccee
Confidence 9999999999 578999999999999999999999999999999999999998 9999999999999999997654444
No 494
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.63 E-value=1e-15 Score=159.60 Aligned_cols=129 Identities=20% Similarity=0.318 Sum_probs=103.8
Q ss_pred cCCCCeeEEEEcCCC-CEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 566 NSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~-~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
||...++|.+|+|+. +.|+|++.|++++|||+.... .+..+..+....+.+-.+++++|+| ++.+||+|..||.|.+
T Consensus 266 GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k-~q~qVik~k~~~g~Rv~~tsC~~nr-dg~~iAagc~DGSIQ~ 343 (641)
T KOG0772|consen 266 GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTK-SQLQVIKTKPAGGKRVPVTSCAWNR-DGKLIAAGCLDGSIQI 343 (641)
T ss_pred CceeeeeccccccCcccceEEecCCCcEEEEecCCch-hheeEEeeccCCCcccCceeeecCC-CcchhhhcccCCceee
Confidence 799999999999955 589999999999999997532 1222222333335567789999999 6999999999999999
Q ss_pred EECCCCc--E-EEEeccCCC--cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 645 WDVSRSQ--V-LTEMREHER--RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 645 wD~~~~~--~-~~~~~~H~~--~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
||.+... + .+.-.+|.. .|+||.||+ ||++|+|-|.|.++++||+++.+..+
T Consensus 344 W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~-dg~~LlSRg~D~tLKvWDLrq~kkpL 400 (641)
T KOG0772|consen 344 WDKGSRTVRPVMKVKDAHLPGQDITSISFSY-DGNYLLSRGFDDTLKVWDLRQFKKPL 400 (641)
T ss_pred eecCCcccccceEeeeccCCCCceeEEEecc-ccchhhhccCCCceeeeeccccccch
Confidence 9986542 2 333467887 999999997 99999999999999999999866543
No 495
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.63 E-value=7.2e-17 Score=182.78 Aligned_cols=200 Identities=21% Similarity=0.245 Sum_probs=139.8
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~ 111 (712)
.+.+.|||.+.+-- +. ....--|++-+|--.+|.|.|.. .+-+...|.+.|+.||+.||.-||..||+|+|||.+
T Consensus 75 ~~l~~~pn~lPfqk-~~---~t~kAAylvRqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsE 149 (1431)
T KOG1240|consen 75 FALMKAPNCLPFQK-VL---VTDKAAYLVRQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSE 149 (1431)
T ss_pred HHhhcCCcccchHH-HH---HhhHHHHHHHHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccc
Confidence 66688999988444 32 23334566777777889998833 334789999999999999999999999999999999
Q ss_pred ceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
||||++-|-+.+.||...+..=- |.|. .+||+
T Consensus 150 NILiTSWNW~~LtDFAsFKPtYL---------------------PeDN--------Padf~------------------- 181 (1431)
T KOG1240|consen 150 NILITSWNWLYLTDFASFKPTYL---------------------PEDN--------PADFT------------------- 181 (1431)
T ss_pred eEEEeeechhhhhcccccCCccC---------------------CCCC--------cccce-------------------
Confidence 99999999999999986632100 0000 02331
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC----------C-CCCccchHHHHH
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----------P-VSCASDIYRLGV 260 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------~-~~~~sDIwSlGv 260 (712)
...|.. ..-..|.|||.+... + .+++.||||+||
T Consensus 182 ---------------fFFDTS--------------------rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GC 226 (1431)
T KOG1240|consen 182 ---------------FFFDTS--------------------RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGC 226 (1431)
T ss_pred ---------------EEEecC--------------------CceeeecChHhhhccccccccCCcccccChhhhhhhhhH
Confidence 111111 112369999988441 2 678999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcc-cCCCchhhhcCc--hhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+++||++ |.+.- ......-.+ ...+...+...+ ....+|..|++.||++|.++++.|+.
T Consensus 227 ViaELf~Eg~PlF~L---SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 227 VIAELFLEGRPLFTL---SQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhcCCCcccH---HHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 9999998 43322 233333333 334445555443 34489999999999999999999995
No 496
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.63 E-value=6.7e-15 Score=143.94 Aligned_cols=128 Identities=20% Similarity=0.359 Sum_probs=108.5
Q ss_pred cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC--CEEEEEeCCCcE
Q 005147 566 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK--SQIASSNFEGVV 642 (712)
Q Consensus 566 ~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~--~~lasgs~Dg~V 642 (712)
+|.-.|.++.|-| |..+|.+++.|+++||||+++. +.+..+.-..+|.+-+|+|--. .++|+|..|-.|
T Consensus 99 ~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTl--------Q~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~V 170 (397)
T KOG4283|consen 99 GHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTL--------QEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQV 170 (397)
T ss_pred cceeeeeeeEEeeecCceeecccccceEEEeecccc--------eeeEEeecCceeehhhcChhhhcceEEEEecCCCcE
Confidence 5788999999999 7779999999999999999872 3344555567888888888422 378888888999
Q ss_pred EEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC-cEEEEEec
Q 005147 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA-ILLLHLVD 701 (712)
Q Consensus 643 ~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~-~~v~~~~~ 701 (712)
+|-|+.+|.+..++.+|.+.|.+|.|+|...-.|+|||.||.|++||++.. .++..+-+
T Consensus 171 rLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~ 230 (397)
T KOG4283|consen 171 RLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQ 230 (397)
T ss_pred EEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeec
Confidence 999999999999999999999999999988889999999999999999976 45555443
No 497
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.62 E-value=4.2e-15 Score=143.40 Aligned_cols=164 Identities=20% Similarity=0.314 Sum_probs=121.5
Q ss_pred eeccCCCccceecccCCCCCCc-EEEEEcCCcEEEEEccCCc------eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEE
Q 005147 523 GSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQGD------LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKV 594 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~~~------~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~i 594 (712)
.++||.+.+.++.| ..+|. ++..++++...+|.+.-.+ ..+|.+.|..++|+| ..++|++++.|++|++
T Consensus 15 ~~~~~~~~v~Sv~w---n~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~ 91 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAW---NCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRI 91 (313)
T ss_pred HhhhhhhcceEEEE---cccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEE
Confidence 35688888888888 23332 2233334444445554333 347999999999998 6679999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC------------------------
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS------------------------ 650 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~------------------------ 650 (712)
||++.+ .+......+..-..++|+| ++.+++.++.|..|...|.++-
T Consensus 92 wd~r~~--------k~~~~i~~~~eni~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~F 162 (313)
T KOG1407|consen 92 WDIRSG--------KCTARIETKGENINITWSP-DGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLF 162 (313)
T ss_pred EEeccC--------cEEEEeeccCcceEEEEcC-CCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEE
Confidence 999863 3344445555666777777 4777777777777777777642
Q ss_pred -----------------cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 651 -----------------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 651 -----------------~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+++.++++|...+.||.|+| +|.+||+||.|..|.+||+..--|++.+
T Consensus 163 flt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC~R~i 227 (313)
T KOG1407|consen 163 FLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDP-DGRYFATGSADALVSLWDVDELICERCI 227 (313)
T ss_pred EEecCCceEEEEeccccccccccccCCcceEEEEECC-CCceEeeccccceeeccChhHhhhheee
Confidence 35667789999999999998 9999999999999999999876666544
No 498
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.62 E-value=9.1e-15 Score=147.52 Aligned_cols=164 Identities=20% Similarity=0.269 Sum_probs=133.6
Q ss_pred CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc---e---ecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 518 SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD---L---LNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 518 ~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~---~---~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
.+...-+.||+.+|.++.| +|..++.+..++.+....+||++.+. + ..|.+-|+-|+|++.-.+||+|+.||+
T Consensus 247 ~vd~~Pf~gH~~SVEDLqW-SptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt 325 (440)
T KOG0302|consen 247 KVDQRPFTGHTKSVEDLQW-SPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGT 325 (440)
T ss_pred eecCccccccccchhhhcc-CCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCce
Confidence 3444556789999999999 99999999999999888889999872 2 258999999999998889999999999
Q ss_pred EEEEEcCCccccCcccccce-EEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc----------------EEE
Q 005147 592 IKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ----------------VLT 654 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~-~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~----------------~~~ 654 (712)
++|||++...- ..|+ ....|+.+|+||.|+|.....|++++.|.+|.|||+..-. +-+
T Consensus 326 ~~iwDLR~~~~-----~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQ 400 (440)
T KOG0302|consen 326 LSIWDLRQFKS-----GQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQ 400 (440)
T ss_pred EEEEEhhhccC-----CCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCce
Confidence 99999987322 2344 4567999999999999999999999999999999985210 111
Q ss_pred EeccC--CCcEEEEEEecCCCCEEEEEECCCcEEE
Q 005147 655 EMREH--ERRVWSIDFSSADPTLLASGSDDGSVKL 687 (712)
Q Consensus 655 ~~~~H--~~~v~sv~fsp~~~~~l~sgs~D~~v~l 687 (712)
-+--| .+.|-.|.|++..+.+++|.+.||...+
T Consensus 401 LLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVf 435 (440)
T KOG0302|consen 401 LLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVF 435 (440)
T ss_pred eEEEecchhHhhhheeccCCCCeEEEecccceeEE
Confidence 11224 4678999999999999999999997543
No 499
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.61 E-value=3.7e-15 Score=157.11 Aligned_cols=212 Identities=23% Similarity=0.258 Sum_probs=148.8
Q ss_pred ceeeccCCCC-CcccccccccccccccCceEEEEe-eCCccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 29 GVELTHGDHL-RNQGGLSGVCENEAAIDPFVHAIE-WGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 29 ~~~l~~~~H~-ni~~~~~~~~~~~~~~~~~~l~~e-~~g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.-+++.+.|+ +++.+++ .+ ......+++++ +.+++|.+++.... ..++...+..++.|++.++.|+|+.|++
T Consensus 48 ~~~~~~~~~~~~i~~~~~-~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~ 123 (384)
T COG0515 48 IQILASLNHPPNIVKLYD-FF---QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGII 123 (384)
T ss_pred HHHHHHccCCcceeeEEE-EE---ecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3378888888 6988877 33 12222444544 47899998775543 2589999999999999999999999999
Q ss_pred eccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||+||+||+++..+ .++++|||.++........ .
T Consensus 124 hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~--------------------------------~------------ 159 (384)
T COG0515 124 HRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST--------------------------------S------------ 159 (384)
T ss_pred ccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc--------------------------------c------------
Confidence 999999999999888 7999999988532211000 0
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGV 260 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGv 260 (712)
. .........|+.+|++||.+.+ ..+....|+|++|+
T Consensus 160 -------~---------------------------------~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~ 199 (384)
T COG0515 160 -------S---------------------------------IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGI 199 (384)
T ss_pred -------c---------------------------------ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHH
Confidence 0 0000112578999999999987 56899999999999
Q ss_pred HHHHhhC---CCCCChh---hHHHHHhhcccCCC---chhhhcC-----chhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 261 LLFELFC---PFSTGEE---KTRTMSSLRHRVLP---PQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 261 ll~eLl~---pf~~~~~---~~~~~~~~~~~~~~---~~~~~~~-----~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
+++++++ ||..... .......+.....+ ....... ....+++..++..+|..|.+..+...+++..
T Consensus 200 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 279 (384)
T COG0515 200 TLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279 (384)
T ss_pred HHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhh
Confidence 9999888 5444332 22333333333322 1111111 2445899999999999999999988886555
Q ss_pred CC
Q 005147 327 EP 328 (712)
Q Consensus 327 ~~ 328 (712)
..
T Consensus 280 ~~ 281 (384)
T COG0515 280 HL 281 (384)
T ss_pred Cc
Confidence 44
No 500
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.61 E-value=2.3e-14 Score=141.27 Aligned_cols=208 Identities=20% Similarity=0.312 Sum_probs=156.7
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC----------CCC--CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER----------SSI--NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~--~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
..+|+.+++++.|..-|+..+.++.+. +.. -.-..+.|.+.+..+.|++|.....++..++|.+..+|
T Consensus 9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW 88 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW 88 (361)
T ss_pred ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence 457888999999999998775553321 111 22467899999999999999999999999999999888
Q ss_pred EccCCc-------------eecCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEEcCCcccc-------------------
Q 005147 558 DLNQGD-------------LLNSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINE------------------- 603 (712)
Q Consensus 558 dl~~~~-------------~~~h~~~V~~i~f~~--~~~~lat~~~d~~I~iwD~~~~~~~------------------- 603 (712)
.-...+ +....+.|++|.|.| -|-.+|+++.||.++||+.....+.
T Consensus 89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~ 168 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKN 168 (361)
T ss_pred eecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccc
Confidence 773221 234588999999999 5679999999999999997651100
Q ss_pred -----------------------------------------CcccccceEEecCCCCeEEEEEcCCCCC---EEEEEeCC
Q 005147 604 -----------------------------------------NRDIHYPVVEMASRSKLSSICWNSYIKS---QIASSNFE 639 (712)
Q Consensus 604 -----------------------------------------~~~~~~~~~~~~~~~~v~~v~~~p~~~~---~lasgs~D 639 (712)
.+..+......+|..+|..|+|.|..+. +||+++.|
T Consensus 169 ~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kD 248 (361)
T KOG2445|consen 169 KQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKD 248 (361)
T ss_pred cCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecC
Confidence 0000011122367788999999996654 89999999
Q ss_pred CcEEEEECCCC--------------------cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC---CCcEE
Q 005147 640 GVVQVWDVSRS--------------------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN---QAILL 696 (712)
Q Consensus 640 g~V~lwD~~~~--------------------~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~---~~~~v 696 (712)
| |+||.+... +.+..+.+|...||.+.|+ ..|.+|+|.|+||+|++|-.+ ..+|+
T Consensus 249 g-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wN-mtGtiLsStGdDG~VRLWkany~n~~kC~ 326 (361)
T KOG2445|consen 249 G-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWN-MTGTILSSTGDDGCVRLWKANYNNLWKCT 326 (361)
T ss_pred c-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEe-eeeeEEeecCCCceeeehhhhhhhhheee
Confidence 9 999998731 2356688999999999999 599999999999999999643 34444
Q ss_pred EEE
Q 005147 697 LHL 699 (712)
Q Consensus 697 ~~~ 699 (712)
..+
T Consensus 327 sv~ 329 (361)
T KOG2445|consen 327 SVL 329 (361)
T ss_pred eEE
Confidence 433
Done!