Query 005147
Match_columns 712
No_of_seqs 709 out of 5421
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:50:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005147.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005147hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpq_A Serine/threonine-protei 100.0 2.3E-42 7.9E-47 359.2 14.2 206 27-327 74-288 (290)
2 4g31_A Eukaryotic translation 100.0 3.1E-42 1.1E-46 361.1 13.9 225 26-329 51-287 (299)
3 4fih_A Serine/threonine-protei 100.0 4.2E-42 1.4E-46 364.5 13.0 207 27-330 120-332 (346)
4 3hyh_A Carbon catabolite-derep 100.0 1.7E-41 5.7E-46 349.8 11.1 205 26-328 61-269 (275)
5 4b9d_A Serine/threonine-protei 100.0 1.9E-41 6.5E-46 360.1 9.6 208 27-329 72-284 (350)
6 4fie_A Serine/threonine-protei 100.0 6.7E-41 2.3E-45 364.0 13.3 207 27-330 197-409 (423)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.8E-41 1.3E-45 352.0 10.6 209 27-330 81-299 (311)
8 4g3f_A NF-kappa-beta-inducing 100.0 5.5E-41 1.9E-45 354.9 10.5 214 27-331 99-332 (336)
9 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-40 4.3E-45 347.9 12.2 208 25-329 73-289 (304)
10 4b99_A Mitogen-activated prote 100.0 2.4E-40 8E-45 360.1 12.7 218 26-332 101-355 (398)
11 4f9c_A Cell division cycle 7-r 100.0 4.6E-39 1.6E-43 346.1 13.8 251 8-328 49-359 (361)
12 3omv_A RAF proto-oncogene seri 100.0 6E-38 2E-42 328.4 14.4 202 27-321 81-293 (307)
13 4asz_A BDNF/NT-3 growth factor 100.0 8.7E-38 3E-42 327.0 8.9 202 27-321 64-282 (299)
14 4aoj_A High affinity nerve gro 100.0 2.9E-37 1E-41 327.4 12.8 202 27-321 92-312 (329)
15 4gt4_A Tyrosine-protein kinase 100.0 5.8E-37 2E-41 322.1 11.7 203 27-322 78-300 (308)
16 3v5w_A G-protein coupled recep 100.0 4.5E-37 1.5E-41 348.6 11.6 202 30-329 244-457 (689)
17 4ase_A Vascular endothelial gr 100.0 4.9E-37 1.7E-41 328.4 9.9 205 27-322 116-341 (353)
18 3uto_A Twitchin; kinase, muscl 100.0 2.5E-36 8.4E-41 344.1 14.4 209 27-331 203-420 (573)
19 3hmm_A TGF-beta receptor type- 100.0 4.6E-36 1.6E-40 315.5 6.9 226 7-321 25-290 (303)
20 3fxz_A Serine/threonine-protei 100.0 1.8E-33 6.1E-38 295.4 15.1 208 27-330 66-278 (297)
21 3qd2_B Eukaryotic translation 100.0 1.2E-33 4E-38 300.6 13.4 193 57-327 136-331 (332)
22 3oz6_A Mitogen-activated prote 100.0 1E-33 3.5E-38 308.8 12.5 233 26-331 56-338 (388)
23 3o0g_A Cell division protein k 100.0 1.6E-33 5.6E-38 294.7 13.2 209 27-329 50-290 (292)
24 3g33_A Cell division protein k 100.0 6.1E-33 2.1E-37 292.6 17.4 206 32-329 68-304 (308)
25 2yab_A Death-associated protei 100.0 5.4E-33 1.9E-37 299.7 16.8 206 27-329 64-280 (361)
26 3ttj_A Mitogen-activated prote 100.0 2.8E-33 9.4E-38 312.2 14.5 208 27-330 110-364 (464)
27 3niz_A Rhodanese family protei 100.0 4.5E-33 1.5E-37 294.4 15.3 210 27-330 68-309 (311)
28 3fe3_A MAP/microtubule affinit 100.0 2.7E-33 9.1E-38 298.3 13.2 205 27-329 63-272 (328)
29 1cm8_A Phosphorylated MAP kina 100.0 4.6E-33 1.6E-37 301.2 14.5 210 26-332 72-318 (367)
30 3p1a_A MYT1 kinase, membrane-a 100.0 7.2E-33 2.5E-37 292.7 14.9 197 34-327 113-310 (311)
31 2w4o_A Calcium/calmodulin-depe 100.0 1.1E-32 3.8E-37 296.2 16.1 208 27-330 97-314 (349)
32 1tki_A Titin; serine kinase, m 100.0 2.8E-33 9.5E-38 297.3 10.7 207 27-329 50-265 (321)
33 3rp9_A Mitogen-activated prote 100.0 9E-33 3.1E-37 308.1 15.4 241 27-332 101-407 (458)
34 3zgw_A Maternal embryonic leuc 100.0 3.2E-33 1.1E-37 299.7 11.1 207 26-328 56-267 (347)
35 3mi9_A Cell division protein k 100.0 1.4E-32 4.9E-37 295.4 15.8 219 27-332 65-322 (351)
36 1ob3_A PFPK5, cell division co 100.0 1E-32 3.6E-37 288.0 13.9 208 27-328 49-287 (288)
37 2y0a_A Death-associated protei 100.0 1.9E-32 6.4E-37 291.6 15.2 206 27-329 63-279 (326)
38 3n9x_A Phosphotransferase; mal 100.0 9.7E-33 3.3E-37 305.4 13.4 239 26-334 73-374 (432)
39 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-32 4E-37 289.0 12.8 205 27-326 85-297 (298)
40 1fot_A TPK1 delta, CAMP-depend 100.0 1.8E-32 6.1E-37 290.6 14.3 202 28-329 56-266 (318)
41 3mtl_A Cell division protein k 100.0 1.6E-32 5.5E-37 291.8 13.9 211 26-330 48-290 (324)
42 2fst_X Mitogen-activated prote 100.0 1E-32 3.4E-37 298.5 12.3 209 27-332 77-322 (367)
43 1o6l_A RAC-beta serine/threoni 100.0 2.9E-32 9.9E-37 291.3 15.4 206 27-329 54-268 (337)
44 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.2E-33 1.8E-37 296.8 8.8 205 27-329 58-266 (336)
45 1t4h_A Serine/threonine-protei 100.0 3.3E-32 1.1E-36 284.3 14.8 207 27-328 74-289 (290)
46 3c0i_A Peripheral plasma membr 100.0 1.9E-32 6.4E-37 294.7 13.1 206 27-328 75-293 (351)
47 2bdw_A Hypothetical protein K1 100.0 2.1E-32 7.1E-37 295.5 13.5 205 27-328 77-291 (362)
48 2pmi_A Negative RE, cyclin-dep 100.0 1.9E-32 6.3E-37 290.4 12.6 210 27-331 52-303 (317)
49 3soa_A Calcium/calmodulin-depe 100.0 2.7E-32 9.3E-37 302.0 14.5 205 27-327 59-273 (444)
50 3tki_A Serine/threonine-protei 100.0 1.7E-32 5.7E-37 291.6 12.2 210 27-329 54-269 (323)
51 3rgf_A Cyclin-dependent kinase 100.0 2.7E-32 9.1E-37 299.3 13.9 215 27-330 67-342 (405)
52 1kob_A Twitchin; kinase, intra 100.0 3.7E-32 1.3E-36 295.8 14.6 208 27-330 97-313 (387)
53 1u5q_A Serine/threonine protei 100.0 2.7E-32 9.2E-37 293.0 13.0 206 27-331 103-315 (348)
54 2c30_A Serine/threonine-protei 100.0 6.3E-32 2.1E-36 286.9 15.7 207 27-330 91-303 (321)
55 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.2E-32 4E-37 296.2 10.1 205 28-329 73-288 (353)
56 1nxk_A MAP kinase-activated pr 100.0 2.6E-32 8.7E-37 298.8 12.9 205 33-329 110-329 (400)
57 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.9E-32 6.5E-37 291.9 11.3 208 27-329 82-326 (329)
58 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.9E-32 1.3E-36 291.9 13.6 203 27-329 90-301 (350)
59 1zy4_A Serine/threonine-protei 100.0 5.1E-32 1.7E-36 283.9 13.7 227 27-330 51-292 (303)
60 4aw2_A Serine/threonine-protei 100.0 2.6E-32 8.9E-37 301.2 11.9 209 28-330 124-347 (437)
61 3llt_A Serine/threonine kinase 100.0 4E-32 1.4E-36 292.9 13.1 193 36-326 94-360 (360)
62 4fr4_A YANK1, serine/threonine 100.0 4E-32 1.4E-36 294.8 13.1 206 27-329 64-279 (384)
63 4dc2_A Protein kinase C IOTA t 100.0 3.3E-32 1.1E-36 296.5 11.8 204 30-329 104-326 (396)
64 2eue_A Carbon catabolite derep 100.0 3.4E-32 1.2E-36 281.9 11.3 205 27-329 62-270 (275)
65 1ua2_A CAK, cell division prot 100.0 9.4E-32 3.2E-36 288.6 15.1 209 27-330 61-300 (346)
66 2x4f_A Myosin light chain kina 100.0 2.8E-32 9.7E-37 295.6 10.9 206 27-328 135-349 (373)
67 3nyv_A Calmodulin-domain prote 100.0 1.2E-31 4.2E-36 301.0 16.4 204 27-328 75-288 (484)
68 3i6u_A CDS1, serine/threonine- 100.0 5.3E-32 1.8E-36 298.2 13.0 205 27-328 189-406 (419)
69 3kvw_A DYRK2, dual specificity 100.0 1.2E-31 4.1E-36 296.2 15.9 199 35-330 156-417 (429)
70 3pg1_A Mitogen-activated prote 100.0 8.8E-32 3E-36 290.4 14.4 216 27-333 78-328 (362)
71 3uc3_A Serine/threonine-protei 100.0 3E-32 1E-36 294.2 10.7 207 27-329 65-282 (361)
72 3mwu_A Calmodulin-domain prote 100.0 2.5E-31 8.6E-36 298.6 18.3 206 27-330 70-285 (486)
73 4e7w_A Glycogen synthase kinas 100.0 7.6E-32 2.6E-36 294.6 13.6 213 27-330 81-330 (394)
74 3dbq_A Dual specificity protei 100.0 2.4E-32 8.2E-37 292.8 9.5 211 27-331 56-283 (343)
75 3eb0_A Putative uncharacterize 100.0 5.8E-32 2E-36 294.4 12.6 212 27-329 49-329 (383)
76 3qyz_A Mitogen-activated prote 100.0 1E-31 3.6E-36 290.3 14.4 216 27-332 74-324 (364)
77 1j1b_A Glycogen synthase kinas 100.0 6.7E-32 2.3E-36 297.5 12.9 213 27-330 96-345 (420)
78 1xjd_A Protein kinase C, theta 100.0 5.2E-32 1.8E-36 290.1 11.4 202 31-329 70-277 (345)
79 2zmd_A Dual specificity protei 100.0 4.5E-32 1.5E-36 295.9 10.8 210 27-330 103-329 (390)
80 3gni_B Strad alpha; kinase fol 100.0 6.2E-32 2.1E-36 294.7 12.0 217 27-330 75-342 (389)
81 3v8s_A RHO-associated protein 100.0 4.6E-32 1.6E-36 296.9 10.9 207 28-330 119-338 (410)
82 2a2a_A Death-associated protei 100.0 2.2E-31 7.6E-36 282.5 15.7 207 27-330 64-281 (321)
83 4exu_A Mitogen-activated prote 100.0 2.5E-31 8.6E-36 288.1 15.9 209 27-332 90-334 (371)
84 3a8x_A Protein kinase C IOTA t 100.0 9.7E-32 3.3E-36 288.3 12.3 206 28-329 59-283 (345)
85 3fme_A Dual specificity mitoge 100.0 5.5E-32 1.9E-36 282.3 9.9 203 31-328 59-273 (290)
86 2i0e_A Protein kinase C-beta I 100.0 1.7E-31 5.9E-36 287.0 14.0 205 28-329 70-284 (353)
87 2xrw_A Mitogen-activated prote 100.0 9.8E-32 3.4E-36 291.3 12.2 208 27-330 73-327 (371)
88 3a62_A Ribosomal protein S6 ki 100.0 1.6E-31 5.3E-36 284.6 12.9 205 27-328 70-283 (327)
89 4ejn_A RAC-alpha serine/threon 100.0 2.3E-31 7.7E-36 295.7 14.7 206 27-329 197-412 (446)
90 2r5t_A Serine/threonine-protei 100.0 3.3E-31 1.1E-35 286.9 15.3 202 31-329 92-301 (373)
91 2vd5_A DMPK protein; serine/th 100.0 9.4E-32 3.2E-36 294.7 11.0 208 28-330 111-336 (412)
92 3coi_A Mitogen-activated prote 100.0 3.8E-31 1.3E-35 284.6 15.5 208 27-331 72-315 (353)
93 3nsz_A CK II alpha, casein kin 100.0 1.3E-31 4.3E-36 285.2 11.7 206 27-329 79-327 (330)
94 3dls_A PAS domain-containing s 100.0 2.4E-31 8.1E-36 284.2 13.6 201 26-330 77-283 (335)
95 3lij_A Calcium/calmodulin depe 100.0 4.4E-31 1.5E-35 297.2 16.4 204 27-328 85-298 (494)
96 2y94_A 5'-AMP-activated protei 100.0 2.1E-31 7.1E-36 297.0 13.4 205 27-329 65-274 (476)
97 3q5i_A Protein kinase; CDPK, m 100.0 6.5E-31 2.2E-35 296.6 17.4 206 27-330 95-310 (504)
98 3is5_A Calcium-dependent prote 100.0 2.3E-31 8E-36 277.4 12.7 205 27-327 69-284 (285)
99 1wak_A Serine/threonine-protei 100.0 1.8E-31 6.3E-36 291.1 12.1 242 36-327 99-397 (397)
100 3f3z_A Calcium/calmodulin-depe 100.0 2.7E-31 9.2E-36 275.4 12.7 205 27-329 55-269 (277)
101 2yex_A Serine/threonine-protei 100.0 3.7E-31 1.2E-35 274.0 13.6 211 27-330 54-270 (276)
102 3kk8_A Calcium/calmodulin depe 100.0 2.3E-31 8E-36 276.8 12.2 208 27-331 54-271 (284)
103 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-31 4.4E-36 285.0 10.2 208 27-329 54-278 (325)
104 3com_A Serine/threonine-protei 100.0 2.9E-31 9.8E-36 280.4 12.6 211 27-331 73-288 (314)
105 2r3i_A Cell division protein k 100.0 4.4E-31 1.5E-35 276.8 13.9 211 27-331 51-293 (299)
106 2ac3_A MAP kinase-interacting 100.0 1.1E-31 3.8E-36 283.8 9.0 216 27-330 59-304 (316)
107 3q60_A ROP5B; pseudokinase, tr 100.0 2.9E-32 1E-36 295.4 4.5 208 29-330 116-361 (371)
108 3p23_A Serine/threonine-protei 100.0 3.4E-31 1.2E-35 292.6 12.9 211 26-328 65-290 (432)
109 2j7t_A Serine/threonine-protei 100.0 6.2E-31 2.1E-35 276.1 14.2 210 27-331 65-285 (302)
110 2acx_A G protein-coupled recep 100.0 2E-31 7E-36 301.5 11.2 207 27-329 233-452 (576)
111 1blx_A Cyclin-dependent kinase 100.0 8.5E-31 2.9E-35 278.2 14.8 207 32-330 68-305 (326)
112 3cok_A Serine/threonine-protei 100.0 4.2E-31 1.4E-35 274.1 11.7 207 27-329 60-270 (278)
113 3fdn_A Serine/threonine-protei 100.0 3.2E-31 1.1E-35 275.2 10.8 205 27-330 58-266 (279)
114 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-31 4.2E-36 287.2 7.8 203 31-328 68-284 (342)
115 3e3p_A Protein kinase, putativ 100.0 4.5E-31 1.5E-35 284.4 12.3 211 29-330 70-323 (360)
116 3byv_A Rhoptry kinase; malaria 100.0 1.7E-32 5.7E-37 298.0 1.0 200 30-329 128-367 (377)
117 1x8b_A WEE1HU, WEE1-like prote 100.0 2.7E-31 9.1E-36 276.2 10.1 202 27-329 59-287 (289)
118 2ycf_A Serine/threonine-protei 100.0 3.5E-31 1.2E-35 281.0 11.2 204 27-327 64-280 (322)
119 3ork_A Serine/threonine protei 100.0 1.5E-31 5.3E-36 282.4 8.2 213 27-327 61-279 (311)
120 3lm5_A Serine/threonine-protei 100.0 9.1E-31 3.1E-35 278.6 13.6 208 28-330 78-296 (327)
121 3an0_A Dual specificity mitoge 100.0 2.7E-31 9.1E-36 284.1 9.5 204 32-330 104-319 (340)
122 1z57_A Dual specificity protei 100.0 5.9E-31 2E-35 280.4 12.0 205 28-330 61-337 (339)
123 3hko_A Calcium/calmodulin-depe 100.0 4.6E-31 1.6E-35 282.6 11.2 215 27-331 77-340 (345)
124 4agu_A Cyclin-dependent kinase 100.0 8.2E-31 2.8E-35 276.5 12.6 209 27-330 51-293 (311)
125 2x7f_A TRAF2 and NCK-interacti 100.0 8.7E-31 3E-35 278.2 12.8 211 28-330 70-295 (326)
126 2i6l_A Mitogen-activated prote 100.0 9.9E-31 3.4E-35 276.5 13.1 215 27-332 57-316 (320)
127 2b9h_A MAP kinase FUS3, mitoge 100.0 9.4E-31 3.2E-35 281.2 12.7 221 27-330 58-314 (353)
128 3fhr_A MAP kinase-activated pr 100.0 2.1E-31 7.3E-36 284.7 7.0 205 31-328 75-294 (336)
129 2y7j_A Phosphorylase B kinase 100.0 1.1E-30 3.8E-35 282.4 12.6 204 27-327 148-365 (365)
130 2vx3_A Dual specificity tyrosi 100.0 3E-30 1E-34 280.8 15.9 194 39-329 117-380 (382)
131 2vgo_A Serine/threonine-protei 100.0 9.1E-31 3.1E-35 272.5 10.8 204 27-329 63-270 (284)
132 3pfq_A PKC-B, PKC-beta, protei 100.0 2.2E-30 7.5E-35 301.3 15.0 202 31-329 394-605 (674)
133 3kex_A Receptor tyrosine-prote 100.0 1.8E-30 6.2E-35 276.0 13.0 203 26-322 63-270 (325)
134 2vwi_A Serine/threonine-protei 100.0 1.5E-30 5E-35 273.1 12.0 215 27-330 62-296 (303)
135 1q8y_A SR protein kinase; tran 100.0 1.4E-30 4.7E-35 281.9 12.1 202 36-330 84-342 (373)
136 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-30 4.5E-35 294.0 12.2 207 28-329 235-456 (543)
137 3op5_A Serine/threonine-protei 100.0 5.3E-31 1.8E-35 284.7 8.6 208 31-321 101-322 (364)
138 3eqc_A Dual specificity mitoge 100.0 4.4E-31 1.5E-35 284.8 7.9 205 27-328 80-331 (360)
139 2jam_A Calcium/calmodulin-depe 100.0 1.3E-30 4.4E-35 274.3 10.8 205 27-329 55-269 (304)
140 3lb7_A RAF proto-oncogene seri 100.0 3.1E-30 1E-34 272.1 13.6 204 27-323 81-295 (307)
141 3bhy_A Death-associated protei 100.0 1.6E-30 5.3E-35 270.4 11.1 205 27-328 57-272 (283)
142 2pml_X PFPK7, Ser/Thr protein 100.0 2.8E-30 9.6E-35 276.9 13.4 208 27-330 92-331 (348)
143 2clq_A Mitogen-activated prote 100.0 1.4E-30 4.7E-35 272.3 10.1 210 27-330 68-287 (295)
144 4aaa_A Cyclin-dependent kinase 100.0 1.6E-30 5.6E-35 277.0 10.6 207 27-328 73-313 (331)
145 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-30 4.2E-35 281.0 9.3 207 28-329 108-329 (355)
146 2wtk_C Serine/threonine-protei 100.0 6.1E-30 2.1E-34 268.9 14.3 212 27-330 55-272 (305)
147 4euu_A Serine/threonine-protei 100.0 2.3E-30 7.9E-35 274.3 11.2 204 27-323 56-304 (319)
148 3vhe_A Vascular endothelial gr 100.0 2E-30 6.9E-35 279.2 10.8 205 27-322 74-349 (359)
149 2psq_A Fibroblast growth facto 100.0 3.2E-30 1.1E-34 279.2 12.3 202 27-321 135-357 (370)
150 3a7i_A MST3 kinase, serine/thr 100.0 2.6E-30 8.8E-35 271.7 11.2 207 27-330 69-279 (303)
151 3pls_A Macrophage-stimulating 100.0 4.9E-30 1.7E-34 268.6 13.2 207 27-321 71-280 (298)
152 2izr_A Casein kinase I isoform 100.0 1.9E-30 6.6E-35 276.4 10.3 207 27-321 53-274 (330)
153 2eu9_A Dual specificity protei 100.0 3.2E-30 1.1E-34 276.7 11.9 204 28-329 66-341 (355)
154 2h6d_A 5'-AMP-activated protei 100.0 2.2E-30 7.4E-35 268.3 10.2 206 27-330 60-270 (276)
155 2owb_A Serine/threonine-protei 100.0 2.7E-30 9.3E-35 275.9 11.0 207 27-330 90-300 (335)
156 2w5a_A Serine/threonine-protei 100.0 1.6E-30 5.6E-35 269.6 9.1 211 27-330 54-276 (279)
157 2rku_A Serine/threonine-protei 100.0 4E-30 1.4E-34 269.1 11.9 207 27-330 64-274 (294)
158 3cek_A Dual specificity protei 100.0 2.2E-30 7.5E-35 273.7 10.0 212 27-332 75-303 (313)
159 2v62_A Serine/threonine-protei 100.0 1.5E-30 5.2E-35 279.1 8.8 208 30-321 100-321 (345)
160 3p86_A Serine/threonine-protei 100.0 4.8E-30 1.6E-34 270.9 12.5 200 27-321 83-291 (309)
161 3poz_A Epidermal growth factor 100.0 1.4E-30 5E-35 277.1 8.5 202 27-321 66-271 (327)
162 1phk_A Phosphorylase kinase; g 100.0 5.1E-30 1.8E-34 268.5 12.2 207 27-330 72-292 (298)
163 3kul_A Ephrin type-A receptor 100.0 5.1E-30 1.7E-34 272.7 12.0 203 27-321 99-306 (325)
164 4hcu_A Tyrosine-protein kinase 100.0 3.8E-30 1.3E-34 265.6 10.7 202 27-322 54-260 (269)
165 3lzb_A Epidermal growth factor 100.0 3.1E-30 1E-34 274.6 10.2 202 27-321 66-271 (327)
166 3f66_A Hepatocyte growth facto 100.0 6.4E-30 2.2E-34 267.9 12.5 205 27-321 75-284 (298)
167 3kmu_A ILK, integrin-linked ki 100.0 1.2E-29 4.2E-34 261.4 14.4 198 27-321 56-263 (271)
168 3c1x_A Hepatocyte growth facto 100.0 4.3E-30 1.5E-34 278.4 11.4 205 27-321 139-348 (373)
169 2rio_A Serine/threonine-protei 100.0 2.8E-30 9.6E-35 285.8 10.1 210 27-328 57-302 (434)
170 3s95_A LIMK-1, LIM domain kina 100.0 9.9E-31 3.4E-35 275.9 5.9 212 27-321 56-275 (310)
171 3ugc_A Tyrosine-protein kinase 100.0 1.9E-30 6.6E-35 271.6 8.0 206 27-321 60-284 (295)
172 1mp8_A Focal adhesion kinase 1 100.0 3E-30 1E-34 268.3 9.4 200 27-321 65-269 (281)
173 4e5w_A Tyrosine-protein kinase 100.0 2.7E-30 9.2E-35 271.2 8.8 206 27-321 72-295 (302)
174 2a19_B Interferon-induced, dou 100.0 2.8E-30 9.6E-35 268.3 8.9 205 27-326 53-272 (284)
175 2dyl_A Dual specificity mitoge 100.0 5E-30 1.7E-34 271.1 10.8 203 31-328 77-290 (318)
176 3qup_A Tyrosine-protein kinase 100.0 9.5E-30 3.3E-34 269.9 12.4 214 27-330 74-307 (323)
177 4eqm_A Protein kinase; transfe 100.0 5.7E-30 1.9E-34 268.3 10.4 205 27-325 60-271 (294)
178 1csn_A Casein kinase-1; phosph 100.0 7.5E-30 2.6E-34 267.1 11.0 206 29-321 56-276 (298)
179 3soc_A Activin receptor type-2 100.0 4.7E-30 1.6E-34 272.5 8.9 206 25-321 65-311 (322)
180 3aln_A Dual specificity mitoge 100.0 7.1E-30 2.4E-34 271.5 10.1 203 31-328 74-292 (327)
181 3l9p_A Anaplastic lymphoma kin 100.0 4.2E-30 1.4E-34 278.1 8.3 206 27-325 123-342 (367)
182 1rjb_A FL cytokine receptor; k 100.0 9.3E-30 3.2E-34 272.5 10.9 204 27-322 97-328 (344)
183 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-29 4.1E-34 264.9 11.5 202 27-321 69-281 (289)
184 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.9E-30 2.3E-34 263.4 9.5 202 27-322 52-258 (268)
185 2xir_A Vascular endothelial gr 100.0 9.2E-30 3.1E-34 268.8 10.3 205 27-322 79-304 (316)
186 3gen_A Tyrosine-protein kinase 100.0 9.8E-30 3.4E-34 264.5 10.2 202 27-322 68-274 (283)
187 4fvq_A Tyrosine-protein kinase 100.0 8.6E-30 2.9E-34 265.6 9.7 195 27-322 61-269 (289)
188 2eva_A TAK1 kinase - TAB1 chim 100.0 1.8E-29 6E-34 266.2 12.1 196 27-321 50-256 (307)
189 3dtc_A Mitogen-activated prote 100.0 1.4E-29 4.9E-34 261.4 11.0 198 27-322 55-267 (271)
190 4hgt_A Casein kinase I isoform 100.0 1.4E-29 4.6E-34 264.8 10.9 208 27-321 53-273 (296)
191 4f0f_A Serine/threonine-protei 100.0 3.2E-29 1.1E-33 261.2 13.5 196 27-321 72-282 (287)
192 3tt0_A Basic fibroblast growth 100.0 2E-29 6.8E-34 274.3 12.3 203 27-322 123-346 (382)
193 3uzp_A CKI-delta, CKID, casein 100.0 2E-29 6.7E-34 263.7 11.2 208 27-321 53-273 (296)
194 1t46_A HOMO sapiens V-KIT hard 100.0 1.7E-29 5.7E-34 266.5 10.1 203 27-321 75-300 (313)
195 3cc6_A Protein tyrosine kinase 100.0 1.2E-29 4.2E-34 263.5 8.9 201 27-322 62-267 (281)
196 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-29 7.3E-34 280.0 11.3 198 27-321 235-438 (450)
197 2wei_A Calmodulin-domain prote 100.0 1.7E-29 5.7E-34 263.5 9.8 204 27-328 70-283 (287)
198 2ivs_A Proto-oncogene tyrosine 100.0 1.8E-29 6E-34 266.4 10.0 203 27-322 75-305 (314)
199 1u59_A Tyrosine-protein kinase 100.0 2.2E-29 7.6E-34 262.5 10.5 203 27-322 59-266 (287)
200 2qol_A Ephrin receptor; recept 100.0 2.5E-29 8.5E-34 272.5 11.3 203 27-321 95-302 (373)
201 3lxl_A Tyrosine-protein kinase 100.0 5.7E-30 1.9E-34 272.3 6.0 207 27-322 73-297 (327)
202 3q4u_A Activin receptor type-1 100.0 9.3E-30 3.2E-34 266.8 7.4 207 27-321 51-295 (301)
203 3a99_A Proto-oncogene serine/t 100.0 1.6E-29 5.6E-34 268.1 9.4 202 28-331 96-303 (320)
204 2iwi_A Serine/threonine-protei 100.0 2.4E-29 8.4E-34 265.4 10.6 203 27-331 83-293 (312)
205 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-29 5.1E-34 274.8 9.1 202 27-321 161-367 (377)
206 1byg_A CSK, protein (C-termina 100.0 1.7E-29 5.9E-34 262.0 8.2 198 27-321 63-266 (278)
207 3t9t_A Tyrosine-protein kinase 100.0 3.1E-29 1.1E-33 258.1 9.8 201 27-321 52-257 (267)
208 1luf_A Muscle-specific tyrosin 100.0 2.8E-29 9.6E-34 268.4 9.7 202 27-321 99-328 (343)
209 2qkw_B Protein kinase; three-h 100.0 2E-29 7E-34 267.3 8.3 204 27-322 84-309 (321)
210 3brb_A Proto-oncogene tyrosine 100.0 6.6E-29 2.3E-33 262.2 12.1 205 27-321 85-301 (313)
211 3kfa_A Tyrosine-protein kinase 100.0 5.6E-29 1.9E-33 259.3 11.2 201 27-321 58-264 (288)
212 1fvr_A Tyrosine-protein kinase 100.0 3.1E-29 1.1E-33 266.6 9.2 200 27-322 74-294 (327)
213 1mqb_A Ephrin type-A receptor 100.0 1E-28 3.5E-33 263.5 12.7 203 27-321 95-302 (333)
214 1p4o_A Insulin-like growth fac 100.0 4.2E-29 1.4E-33 264.7 9.6 203 27-322 77-293 (322)
215 2i1m_A Macrophage colony-stimu 100.0 2.3E-29 7.8E-34 268.2 7.6 203 27-321 98-319 (333)
216 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.4E-28 8.3E-33 258.4 15.4 204 27-321 78-295 (319)
217 1u46_A ACK-1, activated CDC42 100.0 3.1E-29 1.1E-33 261.5 8.2 202 27-321 70-277 (291)
218 3uim_A Brassinosteroid insensi 100.0 2.9E-29 9.9E-34 266.5 7.9 205 27-324 76-307 (326)
219 3mdy_A Bone morphogenetic prot 100.0 8.3E-29 2.8E-33 263.9 11.1 207 28-322 81-325 (337)
220 1xbb_A Tyrosine-protein kinase 100.0 7.8E-29 2.7E-33 258.9 10.7 201 27-321 67-272 (291)
221 1qcf_A Haematopoetic cell kina 100.0 4.8E-29 1.6E-33 277.6 9.0 200 27-321 232-437 (454)
222 2ozo_A Tyrosine-protein kinase 100.0 1.7E-28 5.9E-33 282.6 13.6 202 27-321 385-591 (613)
223 2h34_A Serine/threonine-protei 100.0 1.8E-28 6.1E-33 258.7 12.3 200 27-321 83-289 (309)
224 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-28 3.7E-33 277.5 11.2 201 27-321 265-471 (495)
225 3ll6_A Cyclin G-associated kin 100.0 9.8E-29 3.4E-33 263.1 10.2 214 27-322 74-302 (337)
226 2jii_A Serine/threonine-protei 100.0 7.7E-29 2.6E-33 266.5 9.3 212 27-321 91-329 (352)
227 3g2f_A Bone morphogenetic prot 100.0 7E-29 2.4E-33 264.6 8.8 212 26-321 55-311 (336)
228 2w1i_A JAK2; chromosomal rearr 100.0 6.9E-29 2.4E-33 263.9 8.5 206 27-321 91-315 (326)
229 2pvf_A Fibroblast growth facto 100.0 1.4E-28 4.9E-33 262.3 10.9 202 27-321 89-311 (334)
230 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 8.9E-29 3E-33 275.2 9.4 206 27-327 228-441 (452)
231 2yfx_A Tyrosine-protein kinase 99.9 5.9E-29 2E-33 264.4 7.7 206 27-325 82-301 (327)
232 1qpc_A LCK kinase; alpha beta 99.9 1.4E-28 4.6E-33 255.3 10.0 200 27-321 57-262 (279)
233 3lxp_A Non-receptor tyrosine-p 99.9 1.2E-28 4.2E-33 261.0 9.8 204 27-321 82-303 (318)
234 3qa8_A MGC80376 protein; kinas 99.9 2.2E-28 7.7E-33 279.4 12.4 210 27-328 61-304 (676)
235 2buj_A Serine/threonine-protei 99.9 2E-28 7E-33 258.8 10.6 214 27-322 75-300 (317)
236 3sv0_A Casein kinase I-like; t 99.9 2.4E-28 8E-33 272.9 11.5 208 27-321 51-271 (483)
237 4fl3_A Tyrosine-protein kinase 99.9 2.1E-28 7.1E-33 282.7 10.5 201 27-321 419-624 (635)
238 4eut_A Serine/threonine-protei 99.9 1.6E-28 5.6E-33 268.4 7.3 202 27-321 56-302 (396)
239 3m2w_A MAP kinase-activated pr 99.9 8.5E-28 2.9E-32 252.2 12.3 183 33-329 66-264 (299)
240 2wqm_A Serine/threonine-protei 99.9 6.3E-28 2.2E-32 254.3 11.2 201 27-321 81-290 (310)
241 2h8h_A Proto-oncogene tyrosine 99.9 2.6E-28 8.7E-33 277.0 8.5 207 27-328 311-525 (535)
242 3gxj_A TGF-beta receptor type- 99.9 1.1E-29 3.7E-34 266.4 -3.0 201 32-321 51-290 (303)
243 2j0j_A Focal adhesion kinase 1 99.9 6.6E-28 2.3E-32 279.6 11.4 200 27-321 440-644 (656)
244 2nru_A Interleukin-1 receptor- 99.9 6.6E-28 2.3E-32 253.7 10.2 202 27-321 79-299 (307)
245 3dzo_A Rhoptry kinase domain; 99.9 2.6E-28 9.1E-33 268.1 6.9 174 54-327 177-369 (413)
246 1b6c_B TGF-B superfamily recep 99.9 4.9E-28 1.7E-32 258.7 7.8 200 35-322 93-330 (342)
247 3e7e_A HBUB1, BUB1A, mitotic c 99.9 7.4E-28 2.5E-32 260.1 6.3 193 31-321 120-331 (365)
248 2vuw_A Serine/threonine-protei 99.9 1.3E-27 4.6E-32 255.0 5.9 170 54-326 134-336 (336)
249 2pzi_A Probable serine/threoni 99.9 6.5E-27 2.2E-31 273.4 7.9 193 27-325 128-324 (681)
250 2pm7_B Protein transport prote 99.9 4.3E-22 1.5E-26 208.2 24.3 199 490-693 5-239 (297)
251 3uqc_A Probable conserved tran 99.9 2.6E-24 9E-29 224.2 7.4 170 27-321 80-258 (286)
252 4gqb_B Methylosome protein 50; 99.9 4.7E-22 1.6E-26 212.8 24.2 195 491-694 124-333 (344)
253 4g56_B MGC81050 protein; prote 99.9 3.5E-22 1.2E-26 214.8 22.9 203 490-701 135-352 (357)
254 2ynn_A Coatomer subunit beta'; 99.9 8.6E-22 3E-26 206.6 24.3 200 491-700 52-267 (304)
255 3frx_A Guanine nucleotide-bind 99.9 1.9E-21 6.4E-26 205.5 24.8 199 490-700 13-235 (319)
256 4gqb_B Methylosome protein 50; 99.9 9.8E-22 3.3E-26 210.4 22.3 196 494-697 82-294 (344)
257 3ow8_A WD repeat-containing pr 99.9 1.6E-21 5.5E-26 206.5 23.2 188 492-691 120-320 (321)
258 1got_B GT-beta; complex (GTP-b 99.9 2.8E-21 9.7E-26 206.0 25.2 198 489-699 50-264 (340)
259 2ynn_A Coatomer subunit beta'; 99.9 1.7E-21 5.8E-26 204.3 23.0 170 521-701 6-181 (304)
260 1vyh_C Platelet-activating fac 99.9 2.4E-21 8.1E-26 212.4 25.0 200 490-700 104-335 (410)
261 4h5i_A Guanine nucleotide-exch 99.9 1.3E-21 4.6E-26 211.0 22.0 191 494-693 133-344 (365)
262 1vyh_C Platelet-activating fac 99.9 2.1E-21 7.3E-26 212.7 23.8 201 489-700 145-377 (410)
263 3ow8_A WD repeat-containing pr 99.9 3.3E-21 1.1E-25 204.0 24.2 199 490-700 76-287 (321)
264 4azs_A Methyltransferase WBDD; 99.9 2.5E-24 8.4E-29 245.2 -1.0 187 27-324 290-478 (569)
265 1nr0_A Actin interacting prote 99.9 3.3E-21 1.1E-25 222.5 23.6 207 490-699 99-362 (611)
266 3fm0_A Protein CIAO1; WDR39,SG 99.9 3.2E-21 1.1E-25 206.1 21.6 193 490-691 11-224 (345)
267 2pbi_B Guanine nucleotide-bind 99.9 1.4E-20 4.6E-25 202.1 26.0 200 489-699 59-278 (354)
268 4g56_B MGC81050 protein; prote 99.9 2.6E-21 8.9E-26 208.0 20.4 200 492-699 92-308 (357)
269 2pbi_B Guanine nucleotide-bind 99.9 3.4E-21 1.2E-25 206.8 21.0 189 490-689 150-354 (354)
270 1got_B GT-beta; complex (GTP-b 99.9 1.5E-20 5.3E-25 200.3 24.1 197 491-699 94-308 (340)
271 3f3f_A Nucleoporin SEH1; struc 99.9 7.9E-21 2.7E-25 199.9 20.8 208 489-699 6-344 (351)
272 4ery_A WD repeat-containing pr 99.9 3.4E-20 1.2E-24 194.4 25.5 170 520-701 15-189 (312)
273 2hes_X YDR267CP; beta-propelle 99.9 1.9E-20 6.5E-25 198.8 23.6 167 521-693 7-185 (330)
274 1erj_A Transcriptional repress 99.9 1.7E-20 5.8E-25 204.2 23.6 202 493-699 122-348 (393)
275 4ery_A WD repeat-containing pr 99.9 4.5E-20 1.5E-24 193.5 25.8 199 490-700 19-231 (312)
276 1nr0_A Actin interacting prote 99.9 1.3E-20 4.4E-25 217.5 23.2 200 489-700 54-278 (611)
277 3iz6_a 40S ribosomal protein R 99.9 2.7E-20 9.2E-25 201.7 24.3 201 490-699 104-336 (380)
278 2xzm_R RACK1; ribosome, transl 99.9 4.5E-20 1.5E-24 196.8 24.4 190 490-692 17-244 (343)
279 1erj_A Transcriptional repress 99.9 3.4E-20 1.2E-24 201.8 23.2 191 492-694 62-289 (393)
280 3bg1_A Protein SEC13 homolog; 99.9 1.9E-21 6.4E-26 205.3 12.7 199 489-692 8-247 (316)
281 2hes_X YDR267CP; beta-propelle 99.8 3.3E-20 1.1E-24 196.9 21.4 195 490-693 10-231 (330)
282 4e54_B DNA damage-binding prot 99.8 1.1E-20 3.7E-25 208.5 18.3 199 492-700 117-335 (435)
283 3fm0_A Protein CIAO1; WDR39,SG 99.8 5.3E-20 1.8E-24 196.6 22.4 166 521-696 8-185 (345)
284 3iz6_a 40S ribosomal protein R 99.8 1.8E-20 6.1E-25 203.1 17.6 180 521-703 59-248 (380)
285 3frx_A Guanine nucleotide-bind 99.8 2.7E-19 9.2E-24 188.9 24.6 170 521-700 10-193 (319)
286 3jrp_A Fusion protein of prote 99.8 1.1E-19 3.8E-24 194.4 21.6 200 489-694 6-242 (379)
287 2pm7_B Protein transport prote 99.8 2.7E-19 9.3E-24 186.8 22.9 165 522-694 3-191 (297)
288 2ymu_A WD-40 repeat protein; u 99.8 1.4E-19 5E-24 206.1 22.6 186 490-689 381-577 (577)
289 3dm0_A Maltose-binding peripla 99.8 1.6E-19 5.6E-24 211.3 23.4 203 489-699 377-599 (694)
290 3dwl_C Actin-related protein 2 99.8 2.8E-20 9.5E-25 200.1 14.1 193 494-695 11-239 (377)
291 1gxr_A ESG1, transducin-like e 99.8 1.1E-18 3.7E-23 183.5 24.7 193 496-699 11-221 (337)
292 2j04_B YDR362CP, TAU91; beta p 99.8 9.1E-20 3.1E-24 205.8 16.9 161 520-692 258-428 (524)
293 3ei3_B DNA damage-binding prot 99.8 4.7E-19 1.6E-23 191.2 21.7 201 489-700 68-290 (383)
294 4aow_A Guanine nucleotide-bind 99.8 1.7E-18 5.7E-23 182.7 24.5 176 523-700 33-254 (340)
295 2w18_A PALB2, fancn, partner a 99.8 2.8E-19 9.7E-24 187.1 18.0 181 490-690 152-355 (356)
296 1k8k_C P40, ARP2/3 complex 41 99.8 1.1E-18 3.8E-23 186.5 22.5 200 493-700 7-241 (372)
297 4aow_A Guanine nucleotide-bind 99.8 1.2E-18 4.2E-23 183.7 22.3 164 519-694 162-339 (340)
298 4gga_A P55CDC, cell division c 99.8 2.4E-18 8.2E-23 188.8 24.1 203 490-698 143-401 (420)
299 3zwl_B Eukaryotic translation 99.8 5.2E-18 1.8E-22 180.4 24.9 206 490-700 28-257 (369)
300 3jro_A Fusion protein of prote 99.8 1.2E-18 4.3E-23 205.8 22.0 199 489-694 4-240 (753)
301 4e54_B DNA damage-binding prot 99.8 5.4E-19 1.8E-23 195.0 17.4 168 523-698 114-288 (435)
302 2aq5_A Coronin-1A; WD40 repeat 99.8 6.5E-18 2.2E-22 183.8 24.6 163 539-703 53-218 (402)
303 3gre_A Serine/threonine-protei 99.8 5.5E-18 1.9E-22 186.2 24.1 197 500-700 33-253 (437)
304 2ymu_A WD-40 repeat protein; u 99.8 3.7E-18 1.3E-22 194.4 23.4 196 490-700 340-546 (577)
305 4ggc_A P55CDC, cell division c 99.8 7.5E-18 2.6E-22 175.9 23.7 199 490-694 63-317 (318)
306 2pm9_A Protein WEB1, protein t 99.8 2.5E-18 8.6E-23 186.9 20.7 203 490-700 63-302 (416)
307 3dw8_B Serine/threonine-protei 99.8 9.2E-19 3.1E-23 192.4 17.2 203 493-699 27-323 (447)
308 2xzm_R RACK1; ribosome, transl 99.8 1.2E-17 4E-22 178.0 25.2 167 520-697 13-207 (343)
309 2j04_A TAU60, YPL007P, hypothe 99.8 9.5E-19 3.3E-23 194.4 16.8 178 495-695 16-214 (588)
310 3bg1_A Protein SEC13 homolog; 99.8 5.5E-19 1.9E-23 186.3 14.2 164 522-693 7-199 (316)
311 2xyi_A Probable histone-bindin 99.8 7.6E-18 2.6E-22 185.5 23.9 198 490-692 124-353 (430)
312 3vl1_A 26S proteasome regulato 99.8 2.2E-18 7.6E-23 187.9 19.4 196 495-695 98-325 (420)
313 2oaj_A Protein SNI1; WD40 repe 99.8 1.4E-18 4.7E-23 209.0 19.2 203 491-698 14-248 (902)
314 3f3f_A Nucleoporin SEH1; struc 99.8 6.4E-18 2.2E-22 177.5 21.9 171 522-696 5-253 (351)
315 1gxr_A ESG1, transducin-like e 99.8 1.6E-17 5.4E-22 174.5 24.7 194 492-699 95-303 (337)
316 3k26_A Polycomb protein EED; W 99.8 8.9E-18 3.1E-22 178.6 22.4 165 523-696 13-196 (366)
317 3ei3_B DNA damage-binding prot 99.8 7.4E-18 2.5E-22 181.8 21.9 169 522-699 67-247 (383)
318 3vl1_A 26S proteasome regulato 99.8 2.1E-18 7.2E-23 188.1 17.6 194 497-702 59-288 (420)
319 3mmy_A MRNA export factor; mRN 99.8 1.1E-17 3.8E-22 177.8 22.8 171 519-700 30-312 (368)
320 3vu4_A KMHSV2; beta-propeller 99.8 6.6E-18 2.3E-22 181.2 21.1 200 491-694 16-273 (355)
321 3lrv_A PRE-mRNA-splicing facto 99.8 2.9E-18 9.8E-23 182.7 18.1 152 537-697 89-249 (343)
322 2oaj_A Protein SNI1; WD40 repe 99.8 4.6E-18 1.6E-22 204.5 21.1 172 523-700 430-672 (902)
323 3dm0_A Maltose-binding peripla 99.8 1.5E-17 5E-22 194.8 24.6 168 522-699 376-557 (694)
324 2aq5_A Coronin-1A; WD40 repeat 99.8 8.2E-18 2.8E-22 183.1 20.8 165 521-695 74-257 (402)
325 1sq9_A Antiviral protein SKI8; 99.8 7.5E-18 2.5E-22 182.1 20.0 199 491-700 59-330 (397)
326 3dwl_C Actin-related protein 2 99.8 2.6E-18 8.8E-23 184.7 16.1 198 489-691 50-280 (377)
327 2j04_B YDR362CP, TAU91; beta p 99.8 4.5E-18 1.5E-22 192.0 18.7 169 522-700 201-394 (524)
328 3jrp_A Fusion protein of prote 99.8 1.1E-17 3.7E-22 178.9 20.7 168 521-696 4-195 (379)
329 4a11_B DNA excision repair pro 99.8 2.4E-17 8.3E-22 178.0 23.5 207 491-699 96-372 (408)
330 2pm9_A Protein WEB1, protein t 99.8 9.7E-18 3.3E-22 182.2 20.5 200 489-696 108-341 (416)
331 3i2n_A WD repeat-containing pr 99.8 1.3E-17 4.4E-22 176.9 20.6 202 490-695 107-356 (357)
332 1r5m_A SIR4-interacting protei 99.8 2.4E-17 8.2E-22 178.9 22.4 190 492-694 106-363 (425)
333 1k8k_C P40, ARP2/3 complex 41 99.8 1.3E-17 4.6E-22 178.0 20.0 197 490-692 48-274 (372)
334 2xyi_A Probable histone-bindin 99.8 9.6E-18 3.3E-22 184.7 19.2 178 521-699 121-317 (430)
335 3mmy_A MRNA export factor; mRN 99.8 6.5E-18 2.2E-22 179.6 17.1 200 489-693 34-347 (368)
336 4aez_A CDC20, WD repeat-contai 99.8 3.2E-17 1.1E-21 178.6 21.8 193 493-698 133-342 (401)
337 1sq9_A Antiviral protein SKI8; 99.8 3.5E-17 1.2E-21 176.8 22.0 157 525-694 183-397 (397)
338 3gre_A Serine/threonine-protei 99.8 1.9E-17 6.6E-22 181.9 19.7 199 491-700 60-300 (437)
339 3k26_A Polycomb protein EED; W 99.7 1.8E-17 6.1E-22 176.3 17.7 196 490-692 111-366 (366)
340 1pgu_A Actin interacting prote 99.7 5.1E-17 1.7E-21 185.9 22.6 196 492-699 16-245 (615)
341 3odt_A Protein DOA1; ubiquitin 99.7 6.2E-17 2.1E-21 168.3 21.3 193 492-700 57-263 (313)
342 1yfq_A Cell cycle arrest prote 99.7 3.5E-17 1.2E-21 172.8 19.6 198 492-700 54-290 (342)
343 2j04_A TAU60, YPL007P, hypothe 99.7 5.3E-17 1.8E-21 180.4 21.2 194 491-696 49-258 (588)
344 3dw8_B Serine/threonine-protei 99.7 2.2E-17 7.5E-22 181.4 18.0 164 524-697 173-378 (447)
345 4a11_B DNA excision repair pro 99.7 1.6E-16 5.6E-21 171.5 24.2 201 489-698 38-282 (408)
346 4gq1_A NUP37; propeller, trans 99.7 5.2E-18 1.8E-22 184.6 12.4 129 564-699 132-293 (393)
347 3i2n_A WD repeat-containing pr 99.7 3.8E-17 1.3E-21 173.3 18.7 194 492-694 63-293 (357)
348 3v7d_B Cell division control p 99.7 1.8E-16 6.3E-21 175.4 25.1 174 520-700 154-349 (464)
349 3zwl_B Eukaryotic translation 99.7 1.2E-16 3.9E-21 170.0 22.4 170 517-699 21-214 (369)
350 3v7d_B Cell division control p 99.7 1E-16 3.6E-21 177.5 22.9 195 490-699 158-388 (464)
351 3mkq_A Coatomer beta'-subunit; 99.7 5.4E-17 1.8E-21 192.7 21.7 170 521-701 6-181 (814)
352 2vdu_B TRNA (guanine-N(7)-)-me 99.7 6E-17 2E-21 179.3 20.6 170 522-700 96-279 (450)
353 4h5i_A Guanine nucleotide-exch 99.7 6.6E-17 2.3E-21 174.1 20.1 166 531-707 136-315 (365)
354 3sfz_A APAF-1, apoptotic pepti 99.7 1E-16 3.4E-21 199.7 24.7 171 519-700 606-782 (1249)
355 3mkq_A Coatomer beta'-subunit; 99.7 9.8E-17 3.4E-21 190.4 22.4 201 490-700 51-267 (814)
356 4aez_A CDC20, WD repeat-contai 99.7 2.8E-16 9.6E-21 171.0 23.4 164 525-700 131-301 (401)
357 2vdu_B TRNA (guanine-N(7)-)-me 99.7 2.3E-16 7.7E-21 174.6 22.4 190 491-693 99-342 (450)
358 3jro_A Fusion protein of prote 99.7 1.4E-16 4.7E-21 188.3 19.9 165 522-694 3-191 (753)
359 1p22_A F-BOX/WD-repeat protein 99.7 1.3E-15 4.4E-20 167.7 26.2 214 469-700 104-333 (435)
360 3lrv_A PRE-mRNA-splicing facto 99.7 1.7E-16 5.9E-21 168.9 18.5 161 525-695 122-295 (343)
361 3sfz_A APAF-1, apoptotic pepti 99.7 4.6E-16 1.6E-20 193.8 24.2 198 490-699 611-878 (1249)
362 1pgu_A Actin interacting prote 99.7 4.3E-16 1.5E-20 178.2 22.0 199 490-700 59-291 (615)
363 1r5m_A SIR4-interacting protei 99.7 3.9E-16 1.3E-20 169.3 20.1 159 520-691 239-424 (425)
364 4gq1_A NUP37; propeller, trans 99.7 1.5E-16 5E-21 173.1 13.8 178 522-700 130-356 (393)
365 3odt_A Protein DOA1; ubiquitin 99.7 3.8E-15 1.3E-19 154.7 23.9 161 519-691 9-173 (313)
366 1yfq_A Cell cycle arrest prote 99.7 3.9E-16 1.3E-20 164.7 15.3 154 525-695 8-183 (342)
367 1p22_A F-BOX/WD-repeat protein 99.7 2E-15 6.7E-20 166.2 21.5 183 491-694 170-367 (435)
368 2oit_A Nucleoporin 214KDA; NH2 99.7 5.9E-16 2E-20 170.8 17.3 131 566-698 90-228 (434)
369 2ovr_B FBW7, F-BOX/WD repeat p 99.7 6.7E-15 2.3E-19 162.2 24.6 191 490-700 114-316 (445)
370 3vu4_A KMHSV2; beta-propeller 99.7 2.4E-15 8.4E-20 161.1 19.8 170 520-701 11-236 (355)
371 4gga_A P55CDC, cell division c 99.7 9.2E-15 3.1E-19 160.1 24.2 149 532-695 109-264 (420)
372 2w18_A PALB2, fancn, partner a 99.6 7.4E-15 2.5E-19 153.7 20.6 149 541-700 143-322 (356)
373 3en9_A Glycoprotease, O-sialog 99.6 1.7E-17 5.8E-22 187.7 -0.3 92 26-132 387-479 (540)
374 4ggc_A P55CDC, cell division c 99.6 1.3E-14 4.4E-19 151.1 21.7 148 533-695 30-184 (318)
375 2ovr_B FBW7, F-BOX/WD repeat p 99.6 4E-14 1.4E-18 156.0 24.7 189 490-699 195-398 (445)
376 2oit_A Nucleoporin 214KDA; NH2 99.6 1.7E-14 5.7E-19 159.1 15.3 118 566-693 147-279 (434)
377 1l0q_A Surface layer protein; 99.5 4.9E-13 1.7E-17 144.0 23.2 190 496-700 75-283 (391)
378 1l0q_A Surface layer protein; 99.5 1.6E-12 5.4E-17 140.0 23.2 190 496-700 33-241 (391)
379 3bws_A Protein LP49; two-domai 99.5 3.4E-13 1.2E-17 147.4 18.0 154 533-699 127-299 (433)
380 3bws_A Protein LP49; two-domai 99.5 9.4E-13 3.2E-17 143.9 19.7 196 492-700 167-398 (433)
381 2hqs_A Protein TOLB; TOLB, PAL 99.4 4.5E-12 1.5E-16 138.8 21.6 191 493-699 177-393 (415)
382 1zar_A RIO2 kinase; serine kin 99.4 7.7E-14 2.6E-18 144.5 3.0 86 27-129 153-239 (282)
383 2hqs_A Protein TOLB; TOLB, PAL 99.4 1.9E-11 6.5E-16 133.8 21.9 162 521-696 171-348 (415)
384 2ojh_A Uncharacterized protein 99.3 3.6E-11 1.2E-15 122.7 19.9 192 494-696 41-262 (297)
385 1xfd_A DIP, dipeptidyl aminope 99.2 2.5E-10 8.7E-15 133.4 20.0 190 496-699 18-296 (723)
386 2ecf_A Dipeptidyl peptidase IV 99.2 2.1E-10 7E-15 134.7 18.4 161 531-699 111-328 (741)
387 2ojh_A Uncharacterized protein 99.2 4.8E-10 1.7E-14 114.3 18.3 166 522-699 35-212 (297)
388 1k32_A Tricorn protease; prote 99.2 2.9E-10 9.8E-15 139.1 19.3 186 495-694 296-504 (1045)
389 3vgz_A Uncharacterized protein 99.2 1.4E-09 4.8E-14 114.6 21.1 157 531-700 91-270 (353)
390 1nir_A Nitrite reductase; hemo 99.1 6.2E-10 2.1E-14 126.0 17.5 164 497-700 181-363 (543)
391 1nir_A Nitrite reductase; hemo 99.1 1.1E-09 3.8E-14 124.0 19.5 145 539-697 155-316 (543)
392 3o4h_A Acylamino-acid-releasin 99.1 2.6E-10 8.8E-15 130.2 13.5 147 534-696 115-278 (582)
393 1zth_A RIO1 serine protein kin 99.1 2.3E-11 7.8E-16 124.2 4.0 95 27-133 119-220 (258)
394 1pby_B Quinohemoprotein amine 99.1 1.4E-09 4.7E-14 113.7 17.7 79 618-701 241-319 (337)
395 1ri6_A Putative isomerase YBHE 99.1 3.8E-09 1.3E-13 110.6 20.0 191 496-694 85-312 (343)
396 1pby_B Quinohemoprotein amine 99.1 1.7E-09 5.9E-14 112.9 16.8 117 570-700 83-277 (337)
397 3u4y_A Uncharacterized protein 99.1 6.2E-09 2.1E-13 108.9 19.9 188 499-695 44-255 (331)
398 1xfd_A DIP, dipeptidyl aminope 99.0 4.6E-10 1.6E-14 131.3 11.5 155 532-697 20-242 (723)
399 1k32_A Tricorn protease; prote 99.0 1.5E-09 5E-14 132.9 16.3 152 527-694 294-463 (1045)
400 2ecf_A Dipeptidyl peptidase IV 99.0 2.2E-09 7.6E-14 125.9 17.0 105 570-683 110-230 (741)
401 3o4h_A Acylamino-acid-releasin 99.0 2.7E-09 9.3E-14 121.6 17.1 182 497-696 24-231 (582)
402 3hfq_A Uncharacterized protein 99.0 1.8E-08 6E-13 106.5 22.0 161 531-697 143-324 (347)
403 3scy_A Hypothetical bacterial 99.0 9.3E-09 3.2E-13 109.4 19.8 157 532-697 158-344 (361)
404 1ri6_A Putative isomerase YBHE 99.0 1E-08 3.5E-13 107.3 19.7 157 526-692 35-209 (343)
405 3vgz_A Uncharacterized protein 99.0 9.1E-09 3.1E-13 108.4 18.9 142 552-700 163-311 (353)
406 2z3z_A Dipeptidyl aminopeptida 99.0 3.4E-09 1.2E-13 123.6 17.1 142 556-700 105-301 (706)
407 3u4y_A Uncharacterized protein 99.0 1.8E-08 6.2E-13 105.3 20.9 160 527-700 39-218 (331)
408 1z68_A Fibroblast activation p 99.0 6.7E-10 2.3E-14 129.9 9.2 160 531-696 62-295 (719)
409 2z3z_A Dipeptidyl aminopeptida 99.0 1.2E-08 4E-13 119.1 18.9 135 554-694 236-393 (706)
410 3scy_A Hypothetical bacterial 98.9 4.9E-08 1.7E-12 103.7 21.2 149 541-691 108-290 (361)
411 1z68_A Fibroblast activation p 98.9 2.8E-09 9.5E-14 124.7 12.0 102 570-682 61-189 (719)
412 3hfq_A Uncharacterized protein 98.9 3.8E-08 1.3E-12 103.9 18.9 157 526-692 37-218 (347)
413 1jmx_B Amine dehydrogenase; ox 98.9 5.5E-08 1.9E-12 102.0 18.4 119 571-700 94-292 (349)
414 4a5s_A Dipeptidyl peptidase 4 98.9 9.9E-09 3.4E-13 120.7 13.3 102 571-683 64-192 (740)
415 1xip_A Nucleoporin NUP159; bet 98.8 4.2E-08 1.5E-12 105.3 16.4 140 532-695 41-194 (388)
416 1jmx_B Amine dehydrogenase; ox 98.8 4.8E-08 1.7E-12 102.4 16.1 119 570-700 44-183 (349)
417 1jof_A Carboxy-CIS,CIS-muconat 98.7 2.7E-07 9.3E-12 98.5 18.9 160 528-693 144-342 (365)
418 1q7f_A NHL, brain tumor CG1071 98.7 5.4E-07 1.9E-11 92.2 20.5 148 531-695 123-283 (286)
419 3azo_A Aminopeptidase; POP fam 98.7 1.2E-07 4.1E-12 109.6 16.8 125 567-695 128-277 (662)
420 4gyi_A RIO2 kinase; protein ki 98.7 7.9E-09 2.7E-13 110.3 5.3 66 58-130 187-263 (397)
421 3fvz_A Peptidyl-glycine alpha- 98.7 1.2E-06 4.3E-11 91.9 21.9 149 539-699 65-234 (329)
422 3azo_A Aminopeptidase; POP fam 98.7 1.3E-07 4.3E-12 109.4 15.4 158 527-694 128-327 (662)
423 4a5s_A Dipeptidyl peptidase 4 98.6 2.6E-07 8.7E-12 108.6 14.8 195 496-694 18-296 (740)
424 3pe7_A Oligogalacturonate lyas 98.6 1.8E-06 6E-11 92.2 19.5 184 499-695 40-276 (388)
425 2oiz_A Aromatic amine dehydrog 98.6 1E-06 3.4E-11 94.2 16.7 73 623-700 259-344 (361)
426 1q7f_A NHL, brain tumor CG1071 98.5 5.5E-06 1.9E-10 84.5 21.3 120 567-699 119-244 (286)
427 1jof_A Carboxy-CIS,CIS-muconat 98.5 9.7E-07 3.3E-11 94.1 16.2 120 570-695 84-229 (365)
428 2dg1_A DRP35, lactonase; beta 98.5 4.9E-06 1.7E-10 86.9 20.1 186 496-692 7-213 (333)
429 3fvz_A Peptidyl-glycine alpha- 98.5 1.4E-05 4.9E-10 83.7 22.5 156 530-699 92-284 (329)
430 2xdw_A Prolyl endopeptidase; a 98.4 1.1E-06 3.7E-11 102.7 13.6 116 567-692 123-268 (710)
431 3c5m_A Oligogalacturonate lyas 98.4 6.6E-07 2.3E-11 95.6 10.6 187 497-696 38-277 (396)
432 2bkl_A Prolyl endopeptidase; m 98.4 8.6E-07 2.9E-11 103.3 11.7 120 566-694 118-263 (695)
433 3pe7_A Oligogalacturonate lyas 98.4 1E-05 3.5E-10 86.2 18.9 163 520-694 22-227 (388)
434 3no2_A Uncharacterized protein 98.3 4.4E-06 1.5E-10 85.6 13.7 144 544-700 57-203 (276)
435 1qks_A Cytochrome CD1 nitrite 98.3 5.9E-05 2E-09 85.3 22.6 149 538-701 172-382 (567)
436 3e5z_A Putative gluconolactona 98.3 1.5E-05 5.1E-10 81.9 16.2 161 525-695 24-206 (296)
437 3no2_A Uncharacterized protein 98.3 1.5E-05 5.2E-10 81.6 15.9 148 537-701 9-163 (276)
438 2xdw_A Prolyl endopeptidase; a 98.2 1.4E-05 4.8E-10 93.3 17.5 131 557-694 156-322 (710)
439 2gop_A Trilobed protease; beta 98.2 9.4E-06 3.2E-10 85.1 14.6 123 557-694 48-209 (347)
440 3e5z_A Putative gluconolactona 98.2 3.7E-05 1.3E-09 78.9 18.4 156 527-699 67-252 (296)
441 2gop_A Trilobed protease; beta 98.2 9.6E-06 3.3E-10 85.0 13.9 119 557-695 157-294 (347)
442 1xip_A Nucleoporin NUP159; bet 98.2 1E-05 3.4E-10 86.8 13.6 117 570-696 39-159 (388)
443 2bkl_A Prolyl endopeptidase; m 98.2 1.3E-05 4.3E-10 93.4 15.2 130 557-694 152-306 (695)
444 1rwi_B Serine/threonine-protei 98.2 2.6E-05 8.7E-10 78.5 15.3 146 541-695 117-267 (270)
445 1yr2_A Prolyl oligopeptidase; 98.2 6.5E-06 2.2E-10 96.6 12.1 115 568-693 162-304 (741)
446 1rwi_B Serine/threonine-protei 98.2 6.9E-05 2.4E-09 75.3 18.2 144 542-695 77-225 (270)
447 2dg1_A DRP35, lactonase; beta 98.1 4.3E-05 1.5E-09 79.7 16.4 120 566-694 42-173 (333)
448 3dsm_A Uncharacterized protein 98.1 4.9E-05 1.7E-09 79.7 16.6 151 542-702 140-311 (328)
449 2oiz_A Aromatic amine dehydrog 98.1 4E-05 1.4E-09 81.6 15.6 141 541-696 29-187 (361)
450 1pjx_A Dfpase, DIISOPROPYLFLUO 98.0 0.00013 4.3E-09 75.1 17.3 145 543-699 83-263 (314)
451 3dsm_A Uncharacterized protein 98.0 5.7E-05 2E-09 79.2 14.9 143 541-699 62-219 (328)
452 3c5m_A Oligogalacturonate lyas 98.0 9.8E-06 3.4E-10 86.3 7.7 121 567-697 34-182 (396)
453 1yr2_A Prolyl oligopeptidase; 98.0 8.4E-05 2.9E-09 87.1 16.2 129 557-693 194-351 (741)
454 3tm0_A Aminoglycoside 3'-phosp 97.9 5E-06 1.7E-10 84.2 4.3 84 37-129 69-211 (263)
455 2z2n_A Virginiamycin B lyase; 97.9 0.00097 3.3E-08 67.5 21.3 118 568-696 56-174 (299)
456 1qks_A Cytochrome CD1 nitrite 97.9 0.00016 5.4E-09 81.8 16.1 114 578-701 165-284 (567)
457 1pjx_A Dfpase, DIISOPROPYLFLUO 97.9 0.00028 9.6E-09 72.4 16.3 120 568-692 171-299 (314)
458 3g4e_A Regucalcin; six bladed 97.8 0.0013 4.5E-08 67.4 19.9 150 541-700 63-237 (297)
459 2z2n_A Virginiamycin B lyase; 97.8 0.0023 7.9E-08 64.7 21.3 118 567-695 97-215 (299)
460 3sjl_D Methylamine dehydrogena 97.8 0.00062 2.1E-08 72.6 17.2 136 542-695 58-212 (386)
461 3dxp_A Putative acyl-COA dehyd 97.7 2.7E-05 9.3E-10 82.8 6.0 99 28-130 86-247 (359)
462 3iuj_A Prolyl endopeptidase; h 97.7 0.00011 3.8E-09 85.4 11.5 129 554-694 115-270 (693)
463 2hz6_A Endoplasmic reticulum t 97.6 6.5E-06 2.2E-10 88.1 -0.4 143 538-699 14-156 (369)
464 3hrp_A Uncharacterized protein 97.6 0.0015 5E-08 70.7 17.9 152 532-693 134-299 (409)
465 2ghs_A AGR_C_1268P; regucalcin 97.6 0.0034 1.2E-07 65.3 19.9 154 531-699 92-266 (326)
466 3dr2_A Exported gluconolactona 97.5 0.0012 4.2E-08 67.9 15.1 152 531-694 47-226 (305)
467 3g4e_A Regucalcin; six bladed 97.5 0.0033 1.1E-07 64.4 18.3 154 529-694 13-184 (297)
468 2qc5_A Streptogramin B lactona 97.5 0.0093 3.2E-07 60.1 21.4 118 568-696 61-179 (300)
469 1nd4_A Aminoglycoside 3'-phosp 97.5 3.8E-05 1.3E-09 77.2 3.3 27 103-129 186-212 (264)
470 2mad_H Methylamine dehydrogena 97.5 0.0039 1.3E-07 66.5 19.0 138 544-696 48-199 (373)
471 2mad_H Methylamine dehydrogena 97.5 0.0049 1.7E-07 65.7 19.5 122 573-700 217-358 (373)
472 3iuj_A Prolyl endopeptidase; h 97.5 0.0012 4.1E-08 76.7 15.7 161 525-695 125-317 (693)
473 2qc5_A Streptogramin B lactona 97.4 0.013 4.3E-07 59.1 21.5 118 568-696 103-221 (300)
474 3hrp_A Uncharacterized protein 97.4 0.00093 3.2E-08 72.3 13.3 116 569-695 131-252 (409)
475 3sjl_D Methylamine dehydrogena 97.4 0.0011 3.7E-08 70.7 12.3 116 574-700 38-177 (386)
476 2ghs_A AGR_C_1268P; regucalcin 97.3 0.011 3.9E-07 61.3 19.4 148 531-693 51-213 (326)
477 2qe8_A Uncharacterized protein 97.3 0.0018 6.1E-08 68.0 12.9 125 569-698 17-160 (343)
478 2qe8_A Uncharacterized protein 97.2 0.0048 1.7E-07 64.7 15.0 122 566-690 64-222 (343)
479 1kb0_A Quinohemoprotein alcoho 97.1 0.0038 1.3E-07 72.1 14.4 155 544-702 284-517 (677)
480 2yle_A Protein spire homolog 1 97.0 0.0023 8E-08 61.7 9.3 59 65-123 32-91 (229)
481 1yiq_A Quinohemoprotein alcoho 97.0 0.0081 2.8E-07 69.5 15.7 155 544-701 276-514 (689)
482 3c75_H MADH, methylamine dehyd 96.9 0.013 4.4E-07 63.4 15.1 136 543-696 99-252 (426)
483 2iwa_A Glutamine cyclotransfer 96.7 0.016 5.3E-07 58.5 12.8 122 569-701 21-144 (266)
484 2hz6_A Endoplasmic reticulum t 96.6 0.00023 7.9E-09 75.9 -1.2 109 579-699 8-118 (369)
485 3sg8_A APH(2'')-ID; antibiotic 96.6 0.00065 2.2E-08 70.2 1.9 72 56-130 91-222 (304)
486 3dr2_A Exported gluconolactona 96.5 0.027 9.3E-07 57.6 14.2 116 568-696 44-182 (305)
487 3r70_A Aminoglycoside phosphot 96.5 0.001 3.5E-08 69.3 2.7 72 55-129 101-235 (320)
488 3mbr_X Glutamine cyclotransfer 96.4 0.19 6.6E-06 49.6 18.6 159 526-702 16-189 (243)
489 3nol_A Glutamine cyclotransfer 96.4 0.023 8E-07 56.7 12.1 118 568-700 42-163 (262)
490 1fwx_A Nitrous oxide reductase 96.4 0.025 8.6E-07 63.1 13.4 138 541-692 173-361 (595)
491 2ece_A 462AA long hypothetical 96.4 0.027 9.1E-07 60.8 13.1 154 543-701 43-246 (462)
492 3nok_A Glutaminyl cyclase; bet 96.4 0.048 1.6E-06 54.5 14.1 119 568-700 54-172 (268)
493 2iwa_A Glutamine cyclotransfer 96.4 0.17 5.6E-06 50.9 18.2 152 533-701 25-190 (266)
494 3c75_H MADH, methylamine dehyd 96.4 0.016 5.6E-07 62.6 11.5 101 590-701 99-218 (426)
495 3q7m_A Lipoprotein YFGL, BAMB; 96.3 0.19 6.4E-06 52.7 19.7 147 539-700 194-345 (376)
496 1kb0_A Quinohemoprotein alcoho 96.3 0.039 1.3E-06 63.7 15.1 110 542-657 189-354 (677)
497 3nok_A Glutaminyl cyclase; bet 96.2 0.14 4.8E-06 51.2 16.6 147 542-702 64-220 (268)
498 3nol_A Glutamine cyclotransfer 96.2 0.12 4.2E-06 51.5 16.1 145 542-701 52-210 (262)
499 3mbr_X Glutamine cyclotransfer 96.2 0.091 3.1E-06 51.9 14.7 118 568-700 20-141 (243)
500 2ad6_A Methanol dehydrogenase 96.0 0.076 2.6E-06 59.8 15.4 63 638-702 442-504 (571)
No 1
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-42 Score=359.23 Aligned_cols=206 Identities=15% Similarity=0.180 Sum_probs=167.4
Q ss_pred ccceeeccCCCCCcccccccccccc-cccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG-- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g-- 102 (712)
+|..+|+.++|||||++++ +|+.. .....++++||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++|
T Consensus 74 ~E~~il~~l~HpnIV~~~~-~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~~~ 151 (290)
T 3fpq_A 74 EEAEMLKGLQHPNIVRFYD-SWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 5666899999999999998 55432 334567888888 5899999995543 4999999999999999999999999
Q ss_pred ceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 103 IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 103 IvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||||+||||+ .+|.+||+|||+++.....
T Consensus 152 IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~---------------------------------------------- 185 (290)
T 3fpq_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---------------------------------------------- 185 (290)
T ss_dssp CCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT----------------------------------------------
T ss_pred EEecccChhheeEECCCCCEEEEeCcCCEeCCCC----------------------------------------------
Confidence 99999999999998 4789999999988421100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
.....+||+.|||||++.+ .|+.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvi 218 (290)
T 3fpq_A 186 ----------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMC 218 (290)
T ss_dssp ----------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHH
Confidence 0011579999999999865 59999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
||||+| ||.........+..+.....|+.+.... +...+||.+||..||++|||+.|+|+||||++
T Consensus 219 lyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 219 MLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 999999 7765555556666677766666555444 55669999999999999999999999999985
No 2
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.1e-42 Score=361.10 Aligned_cols=225 Identities=25% Similarity=0.390 Sum_probs=171.6
Q ss_pred eccceeeccCCCCCcccccccccccccc---------cCceEEEEee-CCccHHHhhcCCCC--CCChhHHHHHHHHHHH
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAA---------IDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVE 93 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~---------~~~~~l~~e~-~g~sL~~~l~~~~~--~l~~~~~~~i~~qil~ 93 (712)
.+|..+|+.++|||||++++ ++.+... ...+|++||| .|++|.++|..... ..++..++.|++||+.
T Consensus 51 ~~E~~il~~l~HpnIV~~~~-~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~ 129 (299)
T 4g31_A 51 MREVKALAKLEHPGIVRYFN-AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129 (299)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHH
Confidence 36777899999999999998 4432221 2246788888 59999999965432 2344568999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||+|||++|||||||||+||||+.+|.+||+|||+++.......... ..
T Consensus 130 al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~-----------------------------~~-- 178 (299)
T 4g31_A 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT-----------------------------VL-- 178 (299)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------------------------
T ss_pred HHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccc-----------------------------cc--
Confidence 99999999999999999999999999999999999965433211000 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
. ......+....+||+.|||||++.+..|+.++
T Consensus 179 ~-----------------------------------------------~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~ 211 (299)
T 4g31_A 179 T-----------------------------------------------PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV 211 (299)
T ss_dssp ------------------------------------------------------------CCCTTSCHHHHTTCCCCTHH
T ss_pred c-----------------------------------------------ccccccccCCcccCccccCHHHHcCCCCCCHH
Confidence 0 00000011226899999999999999999999
Q ss_pred chHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 254 DIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 254 DIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|||||||++|||++||....+....+..+....+|+.+....+...+||.+||+.||++|||+.|+|+||||+...
T Consensus 212 DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~ 287 (299)
T 4g31_A 212 DIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD 287 (299)
T ss_dssp HHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred HHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence 9999999999999999877666677777777788887777788888999999999999999999999999998764
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.2e-42 Score=364.53 Aligned_cols=207 Identities=17% Similarity=0.301 Sum_probs=166.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ +|.+ ...+|++||| .||+|.+++.+. .+++.+++.|++||+.||+|||++||||
T Consensus 120 ~Ei~il~~l~HpnIV~l~~-~~~~---~~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiH 193 (346)
T 4fih_A 120 NEVVIMRDYQHENVVEMYN-SYLV---GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIH 193 (346)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5667899999999999988 5533 3467888888 589999999543 3999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.+|.+||+|||+++.......
T Consensus 194 RDlKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------------ 225 (346)
T 4fih_A 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------------ 225 (346)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECCSSSC------------------------------------------------
T ss_pred ccCCHHHEEECCCCCEEEecCcCceecCCCCC------------------------------------------------
Confidence 99999999999999999999999854322100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||++|||||++.+..|+.++|||||||++|||
T Consensus 226 ------------------------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem 263 (346)
T 4fih_A 226 ------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263 (346)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence 00125899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||..... ...+..+.....+. ......+...+||.+||..||++|||+.|+|+||||+....
T Consensus 264 l~G~~PF~~~~~-~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 264 VDGEPPYFNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp HHSSCTTTTSCH-HHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHCCCCCCCcCH-HHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 99 6665433 34455554443322 22334556669999999999999999999999999987543
No 4
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-41 Score=349.78 Aligned_cols=205 Identities=18% Similarity=0.265 Sum_probs=159.9
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+|..+|+.++||||+++++ ++++ ...+|++|||++++|.++|.+.+ .+++.+++.|++||+.||+|||++||+|
T Consensus 61 ~~Ei~il~~l~HpnIv~~~~-~~~~---~~~~~ivmEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiH 135 (275)
T 3hyh_A 61 EREISYLRLLRHPHIIKLYD-VIKS---KDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVH 135 (275)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHCCCCCCCeEEE-EEEE---CCEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 35667899999999999888 5533 35689999999999999996554 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++......
T Consensus 136 RDiKP~NILl~~~~~vkl~DFGla~~~~~~~------------------------------------------------- 166 (275)
T 3hyh_A 136 RDLKPENLLLDEHLNVKIADFGLSNIMTDGN------------------------------------------------- 166 (275)
T ss_dssp CCCCTTTEEECTTCCEEECCSSCC--------------------------------------------------------
T ss_pred ccCChHHeEECCCCCEEEeecCCCeecCCCC-------------------------------------------------
Confidence 9999999999999999999999984321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.....+||+.|||||++.+..| +.++|||||||++||
T Consensus 167 ------------------------------------------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~ 204 (275)
T 3hyh_A 167 ------------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYV 204 (275)
T ss_dssp --------------------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHH
Confidence 0011579999999999998886 689999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||..... ...+..+....++ ......+...+||.+||+.||++|||++|+|+||||+..
T Consensus 205 lltg~~PF~~~~~-~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 205 MLCRRLPFDDESI-PVLFKNISNGVYT-LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHSSCSSCCSSH-HHHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHCCCCCCCCCH-HHHHHHHHcCCCC-CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 999 7765433 3444555444332 112234556699999999999999999999999999754
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.9e-41 Score=360.09 Aligned_cols=208 Identities=18% Similarity=0.227 Sum_probs=169.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhc-CCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~-~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..+|+.++|||||++++ ++++ ...+|++||| .|++|.++|. ..+..+++.+++.|++||+.||+|||++|||
T Consensus 72 ~E~~il~~l~HpnIV~~~~-~~~~---~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~Ii 147 (350)
T 4b9d_A 72 REVAVLANMKHPNIVQYRE-SFEE---NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147 (350)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHCCCCCCCcEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 6677899999999999888 5533 3467888888 4899999994 3444579999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.+|.+||+|||+++......
T Consensus 148 HRDlKp~NILl~~~g~vKl~DFGla~~~~~~~------------------------------------------------ 179 (350)
T 4b9d_A 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV------------------------------------------------ 179 (350)
T ss_dssp ETTCCGGGEEECTTCCEEECSTTEESCCCHHH------------------------------------------------
T ss_pred eccCCHHHEEECCCCCEEEcccccceeecCCc------------------------------------------------
Confidence 99999999999999999999999985431100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......+||++|||||++.+..|+.++|||||||+|||
T Consensus 180 ------------------------------------------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilye 217 (350)
T 4b9d_A 180 ------------------------------------------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYE 217 (350)
T ss_dssp ------------------------------------------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence 00012579999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||..... ...+..+....+|+......++..+||.+||..||++|||+.|+|+||||+...
T Consensus 218 mltG~~PF~~~~~-~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 218 LCTLKHAFEAGSM-KNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp HHHSSCSCCCSSH-HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred HHHCCCCCCCcCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence 999 7765544 345555555555554444456667999999999999999999999999998653
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.7e-41 Score=363.96 Aligned_cols=207 Identities=17% Similarity=0.301 Sum_probs=166.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ +|.+ .+.+|++||| .||+|.++++.. .+++.+++.|++||+.||+|||++||||
T Consensus 197 ~Ei~il~~l~HpnIV~l~~-~~~~---~~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiH 270 (423)
T 4fie_A 197 NEVVIMRDYQHENVVEMYN-SYLV---GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIH 270 (423)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCceEE-EEEE---CCEEEEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5677899999999999988 5533 3467888888 589999999543 3999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.+|.|||+|||+++.......
T Consensus 271 RDiKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------------ 302 (423)
T 4fie_A 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------------ 302 (423)
T ss_dssp CCCSTTTEEECTTCCEEECCCTTCEECCSSCC------------------------------------------------
T ss_pred ccCCHHHEEEcCCCCEEEecCccceECCCCCc------------------------------------------------
Confidence 99999999999999999999999854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||++|||||++.+..|+.++|||||||++|||
T Consensus 303 ------------------------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem 340 (423)
T 4fie_A 303 ------------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340 (423)
T ss_dssp ------------------------------------------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence 00125899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||..... ...+..+.....+. ......+...+||.+||..||++|||+.|+|+||||+....
T Consensus 341 l~G~~PF~~~~~-~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 341 VDGEPPYFNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp HHSSCTTTTSCH-HHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHCCCCCCCcCH-HHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 99 6655433 34455554443222 22233456669999999999999999999999999987543
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.8e-41 Score=351.96 Aligned_cols=209 Identities=18% Similarity=0.240 Sum_probs=166.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ ++++ ...+|++||| .||+|.++|++.+ .+++.+++.|++||+.||+|||++||||
T Consensus 81 ~E~~il~~l~HpnIv~l~~-~~~~---~~~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiH 155 (311)
T 4aw0_A 81 RERDVMSRLDHPFFVKLYF-TFQD---DEKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIH 155 (311)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEe---CCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 5666899999999999888 5543 3467888888 5899999996544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.+|.+||+|||+++........
T Consensus 156 RDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~----------------------------------------------- 188 (311)
T 4aw0_A 156 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----------------------------------------------- 188 (311)
T ss_dssp SCCSGGGEEECTTSCEEECCCTTCEECCTTTTC-----------------------------------------------
T ss_pred CCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc-----------------------------------------------
Confidence 999999999999999999999998643221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+||+.|||||++.+..|+.++|||||||++|||
T Consensus 189 -----------------------------------------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem 227 (311)
T 4aw0_A 189 -----------------------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227 (311)
T ss_dssp -----------------------------------------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHH
Confidence 001125899999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH------HhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e------iL~hp~~~~~~~ 330 (712)
++ ||..... ...+..+....+. .....+++..+||.+||..||++|||++| |++||||+....
T Consensus 228 l~G~~PF~~~~~-~~~~~~i~~~~~~-~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw 299 (311)
T 4aw0_A 228 VAGLPPFRAGNE-GLIFAKIIKLEYD-FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299 (311)
T ss_dssp HHSSCSSCCSSH-HHHHHHHHHTCCC-CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred HhCCCCCCCCCH-HHHHHHHHcCCCC-CCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence 99 7765443 3444444443321 11233456669999999999999999988 589999998643
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.5e-41 Score=354.89 Aligned_cols=214 Identities=16% Similarity=0.110 Sum_probs=162.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ ++.+ ...+|++||| .|++|.++|++.+ .+++.+++.|++||+.||+|||++||||
T Consensus 99 ~E~~il~~l~HpnIV~l~~-~~~~---~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiH 173 (336)
T 4g3f_A 99 EELVACAGLSSPRIVPLYG-AVRE---GPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILH 173 (336)
T ss_dssp HHHHTTTTCCCTTBCCEEE-EEEE---TTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 5677899999999999988 5533 3467888888 5899999996544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 106 HNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 106 rDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|||||+||||+.+| .+||+|||+++..........
T Consensus 174 RDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~-------------------------------------------- 209 (336)
T 4g3f_A 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS-------------------------------------------- 209 (336)
T ss_dssp SCCCGGGEEECTTSCCEEECCCTTCEEC----------------------------------------------------
T ss_pred cccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc--------------------------------------------
Confidence 99999999999887 699999999865422200000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
..+....+||+.|||||++.+..|+.++|||||||+|||
T Consensus 210 -----------------------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye 248 (336)
T 4g3f_A 210 -----------------------------------------LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 248 (336)
T ss_dssp ---------------------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred -----------------------------------------eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence 000111579999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCC-chhhh-cCchhHHHHHHcCCCCCCCCCCHHHH-------------hcCcCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLP-PQLLL-KFPKEASFCLWLLHPEPSGRPKMGEL-------------LQSEFLN 326 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~ei-------------L~hp~~~ 326 (712)
|++ ||...... ..+..+.....+ ...+. ..+...+||.+||..||.+|||+.|+ |+|||+.
T Consensus 249 mltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~ 327 (336)
T 4g3f_A 249 MLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKG 327 (336)
T ss_dssp HHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSS
T ss_pred HHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcC
Confidence 999 66543322 223333333222 12222 33455699999999999999999997 5799998
Q ss_pred CCcCc
Q 005147 327 EPRDS 331 (712)
Q Consensus 327 ~~~~~ 331 (712)
+...+
T Consensus 328 ~~~~P 332 (336)
T 4g3f_A 328 EYKEP 332 (336)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 76553
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-40 Score=347.94 Aligned_cols=208 Identities=17% Similarity=0.227 Sum_probs=162.8
Q ss_pred eeccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
-.+|..+|+.++|||||++++ ++++ ...+|++||| .|++|.++|.+.+ .+++.+++.|++||+.||+|||++||
T Consensus 73 ~~~E~~il~~l~HpnIv~l~~-~~~~---~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~I 147 (304)
T 3ubd_A 73 TKMERDILVEVNHPFIVKLHY-AFQT---EGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGI 147 (304)
T ss_dssp -----CCCCCCCCTTEECEEE-EEEE---TTEEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCCCCCCeEEE-EEEE---CCEEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 345677899999999999888 5543 3467888888 5899999996544 49999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||||+|||++.+|.+||+|||+++......
T Consensus 148 iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~----------------------------------------------- 180 (304)
T 3ubd_A 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHE----------------------------------------------- 180 (304)
T ss_dssp CCSSCCGGGEEECTTSCEEEESSEEEEC----------------------------------------------------
T ss_pred cCCCCCHHHeEEcCCCCEEecccccceeccCCC-----------------------------------------------
Confidence 999999999999999999999999985321110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......+||+.|||||++.+..|+.++|||||||+||
T Consensus 181 -------------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily 217 (304)
T 3ubd_A 181 -------------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217 (304)
T ss_dssp -------------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHH
Confidence 0001157999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
||++ ||...... ..+..+....++ ......++..+||.+||+.||++||| ++|+++||||+...
T Consensus 218 emltG~~PF~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id 289 (304)
T 3ubd_A 218 EMLTGTLPFQGKDRK-ETMTMILKAKLG-MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289 (304)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred HHHhCCCCCCCcCHH-HHHHHHHcCCCC-CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence 9999 77655443 444444443322 12233456669999999999999998 58999999999764
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=360.08 Aligned_cols=218 Identities=14% Similarity=0.151 Sum_probs=165.8
Q ss_pred eccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.+|..+|+.++|||||++++ ++.... ....+|++|||++++|.++|.+.+ .+++.+++.|++||+.||+|||++|
T Consensus 101 ~~Ei~il~~l~HpnIv~l~~-~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~~ 178 (398)
T 4b99_A 101 LRELKILKHFKHDNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSAQ 178 (398)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-ECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCcceEee-eeecccccccCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 36777899999999999988 443321 335789999999899999996544 5999999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
||||||||+|||++.+|.+|++|||+++.........
T Consensus 179 iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~------------------------------------------- 215 (398)
T 4b99_A 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH------------------------------------------- 215 (398)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCC--------------------------------------------------
T ss_pred CcCCCcCccccccCCCCCEEEeecceeeecccCcccc-------------------------------------------
Confidence 9999999999999999999999999986542210000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvl 261 (712)
.......+||++|||||++.+.. |+.++|||||||+
T Consensus 216 -------------------------------------------~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~i 252 (398)
T 4b99_A 216 -------------------------------------------QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCI 252 (398)
T ss_dssp -------------------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred -------------------------------------------ccccccceeChHhcCHHHhcCCCCCCChhheehhHHH
Confidence 00011268999999999988765 7999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhccc--CCC------------------------ch----hhhcCchhHHHHHHcCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHR--VLP------------------------PQ----LLLKFPKEASFCLWLLHP 308 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~--~~~------------------------~~----~~~~~~~~~~li~~~L~~ 308 (712)
+|||++ ||.+.... ..+..+... ..+ .. +....+...+||.+||..
T Consensus 253 l~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~ 331 (398)
T 4b99_A 253 FGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF 331 (398)
T ss_dssp HHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCS
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcC
Confidence 999999 66554433 222222111 000 00 112234556999999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcCch
Q 005147 309 EPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
||.+|||+.|+|+||||+....+.
T Consensus 332 dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 332 EPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp STTTSCCHHHHTTSGGGTTTCCGG
T ss_pred ChhHCcCHHHHhcCHhhCcCCCCc
Confidence 999999999999999999876543
No 11
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.6e-39 Score=346.10 Aligned_cols=251 Identities=18% Similarity=0.215 Sum_probs=167.7
Q ss_pred ccccccccCCCCCcceeeeccceeeccC-CCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHH
Q 005147 8 GERFGVRGDDSNDFELRKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECL 85 (712)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~~~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~ 85 (712)
++.++++--.......|..++..+|..+ +||||+++++ ++.+ .+.+|++|||+ |++|.++++ .+++.+++
T Consensus 49 ~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~-~~~~---~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~ 120 (361)
T 4f9c_A 49 EEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKY-CFRK---NDHVVIAMPYLEHESFLDILN----SLSFQEVR 120 (361)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSE-EEEE---TTEEEEEEECCCCCCHHHHHT----TCCHHHHH
T ss_pred CCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEE-EEEE---CCEEEEEEeCCCcccHHHHHc----CCCHHHHH
Confidence 4555555433333333444566677776 7999999888 5532 35678888885 899999983 38999999
Q ss_pred HHHHHHHHHHHHhhhcCceeccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhh
Q 005147 86 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 164 (712)
Q Consensus 86 ~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (712)
.|++||+.||+|||++|||||||||+|||++.+ +.+||+|||+++........
T Consensus 121 ~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~-------------------------- 174 (361)
T 4f9c_A 121 EYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE-------------------------- 174 (361)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG--------------------------
T ss_pred HHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc--------------------------
Confidence 999999999999999999999999999999866 89999999999765433211
Q ss_pred hccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc
Q 005147 165 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 244 (712)
Q Consensus 165 ~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 244 (712)
..+|+.+...........+ +... .........+||++|||||++
T Consensus 175 ---~~~~~~~~~~~~~~~~~~~---------------------------~~~~------~~~~~~~~~~GT~~Y~APE~l 218 (361)
T 4f9c_A 175 ---LLKFVQSEAQQERCSQNKC---------------------------SICL------SRRQQVAPRAGTPGFRAPEVL 218 (361)
T ss_dssp ---GGGGC-----------------------------------------------------------CCCCGGGCCHHHH
T ss_pred ---ccccccccccccccccccc---------------------------cccc------cccccccccccCccccCHHHH
Confidence 0111111000000000000 0000 000011226899999999999
Q ss_pred cCCC-CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcc---------------------cCCC-----------
Q 005147 245 AGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLP----------- 288 (712)
Q Consensus 245 ~~~~-~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~---------------------~~~~----------- 288 (712)
.+.+ |+.++||||+||++|||++ ||+...+....+..+.. ...|
T Consensus 219 ~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 298 (361)
T 4f9c_A 219 TKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERL 298 (361)
T ss_dssp TTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHH
T ss_pred cCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhh
Confidence 8865 8999999999999999998 78765543333222210 0000
Q ss_pred ---------------------chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 289 ---------------------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 289 ---------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
..+....++..+||.+||+.||++|||++|+|+||||++.
T Consensus 299 ~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 299 RGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp C----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 0011223445699999999999999999999999999875
No 12
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=328.44 Aligned_cols=202 Identities=16% Similarity=0.212 Sum_probs=155.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++|||||++++ ++.+ ..++++||| .||+|.++|......+++.+++.|+.||+.||+|||++||||
T Consensus 81 ~E~~il~~l~HpNIV~l~g-~~~~----~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiH 155 (307)
T 3omv_A 81 NEVAVLRKTRHVNILLFMG-YMTK----DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155 (307)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS----SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEC----CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 5666899999999999887 5532 346777777 589999999666566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.++.+||+|||+++........
T Consensus 156 RDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~----------------------------------------------- 188 (307)
T 3omv_A 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS----------------------------------------------- 188 (307)
T ss_dssp SCCCSSSEEEETTEEEEECCCSSCBC------------------------------------------------------
T ss_pred CccCHHHEEECCCCcEEEeeccCceecccCCcc-----------------------------------------------
Confidence 999999999999999999999998543111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvll 262 (712)
......+||+.|||||++.+ .+|+.++|||||||+|
T Consensus 189 -----------------------------------------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl 227 (307)
T 3omv_A 189 -----------------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL 227 (307)
T ss_dssp ----------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHH
Confidence 00011579999999999964 3599999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCch---hhh-cCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||+| ||............+.....++. ... ..+...+|+.+||+.||++|||+.||++
T Consensus 228 ~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 228 YELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp HHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred HHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99999 77655444444444444433322 222 2344559999999999999999998754
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=8.7e-38 Score=326.97 Aligned_cols=202 Identities=19% Similarity=0.188 Sum_probs=159.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC------------CCCCChhHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------KRSVDVYECLHIFRQIVE 93 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~------------~~~l~~~~~~~i~~qil~ 93 (712)
+|..+|+.++|||||++++ +|.+ ...++++||| .||+|.++|.+. ...+++.+++.|+.||+.
T Consensus 64 ~E~~il~~l~HpnIV~l~g-~~~~---~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~ 139 (299)
T 4asz_A 64 REAELLTNLQHEHIVKFYG-VCVE---GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139 (299)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCccEEE-EEee---CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 5667899999999999988 5533 3467888887 599999999432 245999999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 173 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~ 173 (712)
||+|||++|||||||||+||||+.++.+||+|||+++..... +.
T Consensus 140 gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~----------------------------------~~-- 183 (299)
T 4asz_A 140 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST----------------------------------DY-- 183 (299)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG----------------------------------GC--
T ss_pred HHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC----------------------------------Cc--
Confidence 999999999999999999999999999999999998432111 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCcc
Q 005147 174 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 253 (712)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~s 253 (712)
. .......||+.|||||++.+..|+.++
T Consensus 184 --------------------------------~--------------------~~~~~~~gt~~ymAPE~~~~~~~~~k~ 211 (299)
T 4asz_A 184 --------------------------------Y--------------------RVGGHTMLPIRWMPPESIMYRKFTTES 211 (299)
T ss_dssp --------------------------------E--------------------EETTTEEECGGGCCHHHHHHCCCCHHH
T ss_pred --------------------------------e--------------------eecCceecChhhcCHHHHcCCCCCchh
Confidence 0 000114689999999999999999999
Q ss_pred chHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 254 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 254 DIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||||||+||||+| ||..... ...+..+..+..++......+...+|+.+||+.||++|||+.+|++
T Consensus 212 DVwS~Gvvl~Ellt~G~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 212 DVWSLGVVLWEIFTYGKQPWYQLSN-NEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999997 6665443 3455555555444443344455669999999999999999999854
No 14
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=327.39 Aligned_cols=202 Identities=15% Similarity=0.141 Sum_probs=155.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC--------------CCCChhHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFRQI 91 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~--------------~~l~~~~~~~i~~qi 91 (712)
+|..+|+.++|||||++++ +|.+ ...++++||| .||+|.++|.+.. ..+++.+++.|+.||
T Consensus 92 ~E~~il~~l~HpnIV~l~g-~~~~---~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 167 (329)
T 4aoj_A 92 REAELLTMLQHQHIVRFFG-VCTE---GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167 (329)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHH
Confidence 5666899999999999988 5533 3467888887 5999999995432 348999999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||+|||++|||||||||+||||+.++.+||+|||+++........
T Consensus 168 a~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~--------------------------------- 214 (329)
T 4aoj_A 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY--------------------------------- 214 (329)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--------------------------------------------
T ss_pred HHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcc---------------------------------
Confidence 99999999999999999999999999999999999998543211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
......+||+.|||||++.+..|+.
T Consensus 215 -------------------------------------------------------~~~~~~~gt~~ymAPE~~~~~~~~~ 239 (329)
T 4aoj_A 215 -------------------------------------------------------RVGGRTMLPIRWMPPESILYRKFTT 239 (329)
T ss_dssp ------------------------------------------------------------CCCCGGGCCHHHHTTCCCCH
T ss_pred -------------------------------------------------------eecCcccccccccChhhhcCCCCCc
Confidence 0001146899999999999999999
Q ss_pred ccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 252 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++|||||||+||||+| ||..... ...+..+..+..++......+...+|+.+||+.||++|||+.||++
T Consensus 240 ~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 240 ESDVWSFGVVLWEIFTYGKQPWYQLSN-TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTCSSCH-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred cccccchHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999997 6665443 3444455554444433344556669999999999999999999976
No 15
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.8e-37 Score=322.09 Aligned_cols=203 Identities=16% Similarity=0.169 Sum_probs=159.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFRQ 90 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~q 90 (712)
+|..+++.++|||||++++ +|.+ ...+++++|| .+|+|.++|... ...+++.+++.|+.|
T Consensus 78 ~E~~il~~l~HpNIV~l~g-~~~~---~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 153 (308)
T 4gt4_A 78 HEAMLRARLQHPNVVCLLG-VVTK---DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153 (308)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCcce-EEEE---CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHH
Confidence 4566899999999999998 5533 3467778777 599999999432 134899999999999
Q ss_pred HHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccc
Q 005147 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170 (712)
Q Consensus 91 il~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (712)
|+.||+|||+++||||||||+||||+.++.+||+|||+++..... +
T Consensus 154 ia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~----------------------------------~ 199 (308)
T 4gt4_A 154 IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA----------------------------------D 199 (308)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGG----------------------------------G
T ss_pred HHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCC----------------------------------C
Confidence 999999999999999999999999999999999999998532110 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC
Q 005147 171 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 250 (712)
Q Consensus 171 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 250 (712)
. .......+||+.|||||++.+..|+
T Consensus 200 ~------------------------------------------------------~~~~~~~~gt~~ymAPE~l~~~~~s 225 (308)
T 4gt4_A 200 Y------------------------------------------------------YKLLGNSLLPIRWMAPEAIMYGKFS 225 (308)
T ss_dssp C------------------------------------------------------BCSSSSSCBCGGGCCHHHHHHCCCC
T ss_pred c------------------------------------------------------eeEecccccCCcccCHHHHhCCCCC
Confidence 0 0000114689999999999999999
Q ss_pred CccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 251 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 251 ~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
.++|||||||+||||+| ||..... ...+..+..+..++......+...+|+.+||+.||++|||+.||+++
T Consensus 226 ~ksDVwSfGvvl~El~t~g~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 226 IDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccchhhhHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999999997 6665443 34555555555544444444556699999999999999999999874
No 16
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.5e-37 Score=348.59 Aligned_cols=202 Identities=17% Similarity=0.163 Sum_probs=157.9
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
.+++.++|||||++++ +|.+ ...+|++||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++|||||||
T Consensus 244 ~ll~~~~HP~IV~l~~-~f~~---~~~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDL 318 (689)
T 3v5w_A 244 SLVSTGDCPFIVCMSY-AFHT---PDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVYRDL 318 (689)
T ss_dssp HHHSSSCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred HHHhhCCCCCEeEEEE-EEEE---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence 4567889999999888 5533 3467888888 5999999996544 4999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||||+.+|+|||+|||+++......
T Consensus 319 KPeNILld~~G~vKL~DFGlA~~~~~~~---------------------------------------------------- 346 (689)
T 3v5w_A 319 KPANILLDEHGHVRISDLGLACDFSKKK---------------------------------------------------- 346 (689)
T ss_dssp SGGGEEECTTSCEEECCCTTCEECSSCC----------------------------------------------------
T ss_pred chHHeEEeCCCCEEecccceeeecCCCC----------------------------------------------------
Confidence 9999999999999999999985432110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHHhhC
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~eLl~ 267 (712)
....+||+.|||||++.+ ..|+.++|||||||+||||++
T Consensus 347 ----------------------------------------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLt 386 (689)
T 3v5w_A 347 ----------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 386 (689)
T ss_dssp ----------------------------------------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 011579999999999975 569999999999999999999
Q ss_pred ---CCCCChh--hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 268 ---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 268 ---pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
||..... .......+.... +.......+...+||.+||..||.+|++ ++||++||||+...
T Consensus 387 G~~PF~~~~~~~~~~i~~~i~~~~-~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id 457 (689)
T 3v5w_A 387 GHSPFRQHKTKDKHEIDRMTLTMA-VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457 (689)
T ss_dssp SSCTTCGGGCCCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred CCCCCCCCChHHHHHHHHhhcCCC-CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence 6643221 122222222221 1112233456669999999999999998 79999999998753
No 17
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.9e-37 Score=328.35 Aligned_cols=205 Identities=20% Similarity=0.226 Sum_probs=160.5
Q ss_pred ccceeeccCCC-CCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------------CCCCChhHHHHHHH
Q 005147 27 SDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~~H-~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------------~~~l~~~~~~~i~~ 89 (712)
+|..+|.++.| ||||++++ +|.. ...+++++||| .+|+|.++|++. ...+++.+++.|+.
T Consensus 116 ~E~~il~~l~hhpnIV~l~g-~~~~--~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 192 (353)
T 4ase_A 116 SELKILIHIGHHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 192 (353)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECC--TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEEEEEE-EEEe--cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHH
Confidence 45567888866 89999988 5522 23457777777 599999999432 23489999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||+|||+++||||||||+|||++.++.+||+|||+++......
T Consensus 193 qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~--------------------------------- 239 (353)
T 4ase_A 193 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--------------------------------- 239 (353)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT---------------------------------
T ss_pred HHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC---------------------------------
Confidence 99999999999999999999999999999999999999996542210
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
++ .......||+.|||||++.+..|
T Consensus 240 ~~-------------------------------------------------------~~~~~~~gt~~ymAPE~l~~~~y 264 (353)
T 4ase_A 240 DY-------------------------------------------------------VRKGDARLPLKWMAPETIFDRVY 264 (353)
T ss_dssp TS-------------------------------------------------------EEETTEEECGGGCCHHHHHHCCC
T ss_pred Cc-------------------------------------------------------eeeccccccccccCHHHHhcCCC
Confidence 00 00111468999999999999999
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||+||||+| ||............+..+..++......+...+|+.+||+.||++|||+.+|++|
T Consensus 265 ~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 265 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 999999999999999997 7765544444555555554444444445666799999999999999999999986
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-36 Score=344.14 Aligned_cols=209 Identities=17% Similarity=0.236 Sum_probs=167.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+|..+|+.++||||+++++ +|++ ...++++||| .||+|.++|......+++.+++.|++||+.||+|||++||+|
T Consensus 203 ~Ei~il~~l~hpnIv~l~~-~~~~---~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH 278 (573)
T 3uto_A 203 KEIQTMSVLRHPTLVNLHD-AFED---DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278 (573)
T ss_dssp HHHHHHHHTCCTTBCCEEE-EEEC---SSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEE---CCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4666789999999999888 5543 3467888887 589999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCC--CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+|||++.+ +.+||+|||+++......
T Consensus 279 RDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------------------------------------- 311 (573)
T 3uto_A 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------------------------------------- 311 (573)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-----------------------------------------------
T ss_pred ccCChhhccccCCCCCCEEEeeccceeEccCCC-----------------------------------------------
Confidence 9999999999854 899999999985432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+||++|||||++.+..|+.++|||||||+||
T Consensus 312 --------------------------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvily 347 (573)
T 3uto_A 312 --------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 347 (573)
T ss_dssp --------------------------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 001257999999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC--CCchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||++ ||...... ..+..+.... ++... ....+...+||.+||..||.+|||+.|+|+||||+....+
T Consensus 348 eml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~ 420 (573)
T 3uto_A 348 ILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 420 (573)
T ss_dssp HHHHSCCSSCCSSHH-HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred HHHHCCCCCCCcCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence 9999 66654443 4444444432 23333 3344556699999999999999999999999999976553
No 19
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.6e-36 Score=315.55 Aligned_cols=226 Identities=13% Similarity=0.126 Sum_probs=156.0
Q ss_pred cccccccccCCCCC-cceeeeccceeeccCCCCCccccccccccccc-ccCceEEEEee-CCccHHHhhcCCCCCCChhH
Q 005147 7 RGERFGVRGDDSND-FELRKHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYE 83 (712)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~r~~~~~~~l~~~~H~ni~~~~~~~~~~~~-~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~ 83 (712)
+|+.++|+--.... ..+..+.+...+..++|||||++++ ++.++. ....++++||| .|++|.++|+.. .+++.+
T Consensus 25 ~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g-~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~ 101 (303)
T 3hmm_A 25 RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEG 101 (303)
T ss_dssp TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEE-EEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHH
T ss_pred CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEE-EEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCCHHH
Confidence 45566665433222 2234456666778899999999998 543332 33467888888 589999999554 389999
Q ss_pred HHHHHHHHHHHHHHhhhc--------CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCC
Q 005147 84 CLHIFRQIVEIVYAAHSQ--------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (712)
Q Consensus 84 ~~~i~~qil~~l~~lHs~--------gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (712)
+..|+.||+.||+|||++ |||||||||+||||+.++.+||+|||+++........
T Consensus 102 ~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~----------------- 164 (303)
T 3hmm_A 102 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT----------------- 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------------
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCc-----------------
Confidence 999999999999999987 9999999999999999999999999998542111000
Q ss_pred CchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccC
Q 005147 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (712)
Q Consensus 156 ~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt 235 (712)
........+||
T Consensus 165 ---------------------------------------------------------------------~~~~~~~~~GT 175 (303)
T 3hmm_A 165 ---------------------------------------------------------------------IDIAPNHRVGT 175 (303)
T ss_dssp ---------------------------------------------------------------------ESCC-----CC
T ss_pred ---------------------------------------------------------------------eeeeccccccc
Confidence 00001125799
Q ss_pred ccccCcccccCC------CCCCccchHHHHHHHHHhhC--C-CC----------CC---h-hhHHHHHhhcccCCCchhh
Q 005147 236 NWYASPEELAGA------PVSCASDIYRLGVLLFELFC--P-FS----------TG---E-EKTRTMSSLRHRVLPPQLL 292 (712)
Q Consensus 236 ~~Y~aPE~~~~~------~~~~~sDIwSlGvll~eLl~--p-f~----------~~---~-~~~~~~~~~~~~~~~~~~~ 292 (712)
++|||||++.+. .|+.++|||||||+||||+| + |. .. . ........+......+.++
T Consensus 176 ~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p 255 (303)
T 3hmm_A 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 255 (303)
T ss_dssp GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred ccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCC
Confidence 999999999764 36789999999999999998 2 21 10 0 1112222222222222222
Q ss_pred hcC------chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 293 LKF------PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 293 ~~~------~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
..+ ....+|+.+||+.||++|||+.||++
T Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 111 23458999999999999999999976
No 20
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.8e-33 Score=295.41 Aligned_cols=208 Identities=15% Similarity=0.186 Sum_probs=162.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++... .+++.++..++.||+.||+|||++||+|
T Consensus 66 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H 139 (297)
T 3fxz_A 66 NEILVMRENKNPNIVNYLD-SYLV---GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIH 139 (297)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhcCCCCCCCeEeE-EEEE---CCEEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 4556788899999999888 4432 3457788887 599999999544 3899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++........
T Consensus 140 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 171 (297)
T 3fxz_A 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------ 171 (297)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECCSTTC------------------------------------------------
T ss_pred CCCCHHHEEECCCCCEEEeeCCCceecCCccc------------------------------------------------
Confidence 99999999999999999999998744321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||.+.+..++.++|||||||++|||
T Consensus 172 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 209 (297)
T 3fxz_A 172 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209 (297)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 00114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||......................... .+...+|+.+||..||.+|||+.|+|+||||+....
T Consensus 210 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 210 IEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 99 666554443333333322222222223 344559999999999999999999999999987644
No 21
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-33 Score=300.61 Aligned_cols=193 Identities=26% Similarity=0.463 Sum_probs=153.3
Q ss_pred eEEEEee-CCccHHHhhcCCCC--CCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCC
Q 005147 57 FVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (712)
Q Consensus 57 ~~l~~e~-~g~sL~~~l~~~~~--~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~ 133 (712)
++++||+ .|++|.+++..... ..++..++.|+.||+.||+|||++||+||||||+||+++.++.+||+|||+++..+
T Consensus 136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 215 (332)
T 3qd2_B 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 215 (332)
T ss_dssp EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccc
Confidence 6777777 58899999955432 24555689999999999999999999999999999999999999999999986543
Q ss_pred CCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 005147 134 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 213 (712)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (712)
....... .+ .
T Consensus 216 ~~~~~~~-----------------------------~~--------------~--------------------------- 225 (332)
T 3qd2_B 216 QDEEEQT-----------------------------VL--------------T--------------------------- 225 (332)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cchhhcc-----------------------------cc--------------c---------------------------
Confidence 3210000 00 0
Q ss_pred ccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCchhhh
Q 005147 214 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLL 293 (712)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~ 293 (712)
............||+.|+|||.+.+..++.++|||||||++|||++|+.+................+.....
T Consensus 226 --------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (332)
T 3qd2_B 226 --------PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQ 297 (332)
T ss_dssp --------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHH
T ss_pred --------cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCccccc
Confidence 000000011257899999999999999999999999999999999999887777777777777777777777
Q ss_pred cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 294 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 294 ~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
..+...+||.+||..||.+|||+.++|+||||+.
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 7788889999999999999999999999999986
No 22
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-33 Score=308.81 Aligned_cols=233 Identities=15% Similarity=0.195 Sum_probs=162.3
Q ss_pred eccceeeccCC-CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+|..+. ||||+++++ ++.. .....+++++|+.+++|.++++.. .+++..+..++.||+.||+|||++||+
T Consensus 56 ~~E~~~l~~l~~h~niv~l~~-~~~~-~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~iv 131 (388)
T 3oz6_A 56 FREIMILTELSGHENIVNLLN-VLRA-DNDRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGLL 131 (388)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEEC-TTSSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhccCCCCCCeeee-EEec-CCCCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 35666777776 999999988 4432 234578999999889999999553 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++.......... ...
T Consensus 132 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-----------------------------~~~------------ 170 (388)
T 3oz6_A 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN-----------------------------NIP------------ 170 (388)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC-----------------------------CGG------------
T ss_pred eCCCCHHHeEEcCCCCEEecCCcccccccccccccc-----------------------------ccc------------
Confidence 999999999999999999999999865432110000 000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~ 263 (712)
....+... . + ..........+||++|+|||++.+ ..|+.++|||||||++|
T Consensus 171 ------------~~~~~~~~--~---~-----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ 222 (388)
T 3oz6_A 171 ------------LSINENTE--N---F-----------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG 222 (388)
T ss_dssp ------------GCCC-------------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred ------------cccccccc--c---c-----------ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHH
Confidence 00000000 0 0 000001122689999999999987 56999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCch--------------------------------hh-------------hcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQ--------------------------------LL-------------LKF 295 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~--------------------------------~~-------------~~~ 295 (712)
||++ ||............+.....|.. +. ...
T Consensus 223 ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (388)
T 3oz6_A 223 EILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN 302 (388)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCC
Confidence 9999 66554433222221111111110 00 223
Q ss_pred chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 296 PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+...+||.+||..||.+|||+.|+|+||||+....+
T Consensus 303 ~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 303 EEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338 (388)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred HHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence 455699999999999999999999999999876543
No 23
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.6e-33 Score=294.66 Aligned_cols=209 Identities=16% Similarity=0.195 Sum_probs=161.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++. ....+++++|+.+++|.+++......+++.+++.|+.||+.||+|||++||+||
T Consensus 50 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~ 125 (292)
T 3o0g_A 50 REICLLKELKHKNIVRLHD-VLH---SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHR 125 (292)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhcCCCCCEeeEEe-EEE---eCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 5667889999999999888 543 345789999998888988886555669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++...+....
T Consensus 126 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 156 (292)
T 3o0g_A 126 DLKPQNLLINRNGELKLANFGLARAFGIPVR------------------------------------------------- 156 (292)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCSCCS-------------------------------------------------
T ss_pred CCCHHHEEEcCCCCEEEeecccceecCCccc-------------------------------------------------
Confidence 9999999999999999999998854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......||++|+|||++.+.. ++.++|||||||++|+|
T Consensus 157 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 195 (292)
T 3o0g_A 157 -----------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195 (292)
T ss_dssp -----------------------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHH
Confidence 001146799999999998776 89999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccC--CC-c-------------------------hhhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRV--LP-P-------------------------QLLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~--~~-~-------------------------~~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||+........+..+.... .+ . ......+...+||.+||+.||++||
T Consensus 196 ~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 275 (292)
T 3o0g_A 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI 275 (292)
T ss_dssp TTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCC
Confidence 97 6554444333333322110 00 0 0011223445999999999999999
Q ss_pred CHHHHhcCcCCCCCc
Q 005147 315 KMGELLQSEFLNEPR 329 (712)
Q Consensus 315 t~~eiL~hp~~~~~~ 329 (712)
|+.|+|+||||+...
T Consensus 276 t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 276 SAEEALQHPYFSDFC 290 (292)
T ss_dssp CHHHHHTSGGGTTC-
T ss_pred CHHHHhcCcccccCC
Confidence 999999999999754
No 24
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-33 Score=292.59 Aligned_cols=206 Identities=19% Similarity=0.235 Sum_probs=153.3
Q ss_pred eccCCCCCcccccccccccccc--cCceEEEEeeCCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENEAA--IDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~--~~~~~l~~e~~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|..++||||+++++ ++..... ...+++++|+.+++|.+++.... ..+++.+++.|+.||+.||+|||++||+||||
T Consensus 68 l~~~~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dl 146 (308)
T 3g33_A 68 LEAFEHPNVVRLMD-VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 146 (308)
T ss_dssp HHHHCCTTBCCEEE-EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HhhcCCCCeEEeee-eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 33446999999988 5533322 22578999998889999995443 34899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.+||+|||+++..+...
T Consensus 147 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------------- 174 (308)
T 3g33_A 147 KPENILVTSGGTVKLADFGLARIYSYQM---------------------------------------------------- 174 (308)
T ss_dssp CTTTEEECTTSCEEECSCSCTTTSTTCC----------------------------------------------------
T ss_pred CHHHEEEcCCCCEEEeeCccccccCCCc----------------------------------------------------
Confidence 9999999999999999999885432110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 175 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g 215 (308)
T 3g33_A 175 ---------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 215 (308)
T ss_dssp ---------------------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTS
T ss_pred ---------------------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhC
Confidence 0011468999999999999999999999999999999999
Q ss_pred --CCCCChhhHHHHHhhccc-CCCc-----------------------hh-hhcCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 268 --PFSTGEEKTRTMSSLRHR-VLPP-----------------------QL-LLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~-~~~~-----------------------~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
||................ ..+. .. ....+...+||.+||+.||.+|||+.|+|
T Consensus 216 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 295 (308)
T 3g33_A 216 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295 (308)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHh
Confidence 665544332222211110 0000 00 11223445899999999999999999999
Q ss_pred cCcCCCCCc
Q 005147 321 QSEFLNEPR 329 (712)
Q Consensus 321 ~hp~~~~~~ 329 (712)
+||||+...
T Consensus 296 ~h~~~~~~~ 304 (308)
T 3g33_A 296 QHSYLHKDE 304 (308)
T ss_dssp TSTTC----
T ss_pred cCccccCCC
Confidence 999998753
No 25
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.4e-33 Score=299.66 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=162.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+++++ ++.+ ...+++++|+. |++|.+++... ..+++.++..|+.||+.||.|||++||+|
T Consensus 64 ~E~~il~~l~hpnIv~l~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH 138 (361)
T 2yab_A 64 REVSILRQVLHPNIITLHD-VYEN---RTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKIAH 138 (361)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCcCCCcEEE-EEEe---CCEEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5566789999999999888 5533 34677888875 99999999554 35999999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++..+ .+||+|||++.......
T Consensus 139 rDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~--------------------------------------------- 173 (361)
T 2yab_A 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--------------------------------------------- 173 (361)
T ss_dssp CCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC---------------------------------------------
T ss_pred CCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC---------------------------------------------
Confidence 99999999998776 79999999884432110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 174 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi 207 (361)
T 2yab_A 174 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207 (361)
T ss_dssp ----------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCCccEECchHHcCCCCCccccHHHHHHH
Confidence 0011468999999999999899999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccC--CCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|+|++ ||...... ..+..+.... +++..... .+...+||.+||..||.+|||+.|+|+||||+...
T Consensus 208 l~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 280 (361)
T 2yab_A 208 TYILLSGASPFLGDTKQ-ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (361)
T ss_dssp HHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence 999998 66554333 3344443332 23333333 44556999999999999999999999999998654
No 26
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.8e-33 Score=312.19 Aligned_cols=208 Identities=18% Similarity=0.224 Sum_probs=157.1
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++.... ....+++++|+.+++|.+.+.. .+++.+++.|++||+.||+|||++||
T Consensus 110 ~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~i 185 (464)
T 3ttj_A 110 RELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 185 (464)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 5666889999999999998 554332 2356899999988889988843 38999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+|||++.++.+||+|||+++..+...
T Consensus 186 iHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------------------------------------- 218 (464)
T 3ttj_A 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 218 (464)
T ss_dssp CCCCCCGGGEEECTTSCEEECCCCCC-----CC-----------------------------------------------
T ss_pred ccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc-----------------------------------------------
Confidence 999999999999999999999999985432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+||++|+|||++.+..|+.++|||||||++|
T Consensus 219 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 254 (464)
T 3ttj_A 219 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254 (464)
T ss_dssp --------------------------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHH
Confidence 001157899999999999999999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhccc-CCC-c-----------------------hhhhc----------------CchhH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHR-VLP-P-----------------------QLLLK----------------FPKEA 299 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~-~~~-~-----------------------~~~~~----------------~~~~~ 299 (712)
||++ ||....... .+..+... ..| + .+... .+...
T Consensus 255 ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 333 (464)
T 3ttj_A 255 EMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 333 (464)
T ss_dssp HHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHH
Confidence 9998 665543322 22211110 000 0 00000 23355
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+||..||.+|||+.|+|+||||+....
T Consensus 334 dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 364 (464)
T 3ttj_A 334 DLLSKMLVIDPAKRISVDDALQHPYINVWYD 364 (464)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred HHHHHHcCCChhhCCCHHHHhcChhhhhccC
Confidence 9999999999999999999999999996554
No 27
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.5e-33 Score=294.37 Aligned_cols=210 Identities=15% Similarity=0.206 Sum_probs=161.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|..++||||+++++ ++. ....+++++|+.+++|.+++......+++.+++.+++||+.||+|||++||+||
T Consensus 68 ~E~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~ 143 (311)
T 3niz_A 68 REISLLKELHHPNIVSLID-VIH---SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHR 143 (311)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC---CSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHHHcCCCCEeeeee-EEc---cCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 5666788899999999888 553 335789999998889999997666669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++...+....
T Consensus 144 Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------- 174 (311)
T 3niz_A 144 DLKPQNLLINSDGALKLADFGLARAFGIPVR------------------------------------------------- 174 (311)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEETTSCCC-------------------------------------------------
T ss_pred CCchHhEEECCCCCEEEccCcCceecCCCcc-------------------------------------------------
Confidence 9999999999999999999998854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......||++|+|||++.+. .++.++|||||||++|+|
T Consensus 175 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 213 (311)
T 3niz_A 175 -----------------------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEM 213 (311)
T ss_dssp --------------------------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHH
Confidence 00114679999999999774 589999999999999999
Q ss_pred hC---CCCCChhhHHH--HHhhcccCCCch--------------------------hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRT--MSSLRHRVLPPQ--------------------------LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 266 l~---pf~~~~~~~~~--~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
++ ||......... +........+.. .....+...+||.+||..||.+||
T Consensus 214 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 293 (311)
T 3niz_A 214 ITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI 293 (311)
T ss_dssp HHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSC
T ss_pred HhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCC
Confidence 98 66543332221 111111111110 011223455999999999999999
Q ss_pred CHHHHhcCcCCCCCcC
Q 005147 315 KMGELLQSEFLNEPRD 330 (712)
Q Consensus 315 t~~eiL~hp~~~~~~~ 330 (712)
|+.|+|+||||+....
T Consensus 294 t~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 294 SARDAMNHPYFKDLDP 309 (311)
T ss_dssp CHHHHHTSGGGTTSCT
T ss_pred CHHHHhcCcccccCCc
Confidence 9999999999997643
No 28
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.7e-33 Score=298.29 Aligned_cols=205 Identities=17% Similarity=0.205 Sum_probs=160.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++. ....+++++|+ .|++|.+++...+ .+++.+++.++.||+.||+|||++||+|
T Consensus 63 ~E~~~l~~l~hpnIv~l~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivH 137 (328)
T 3fe3_A 63 REVRIMKILNHPNIVKLFE-VIE---TEKTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVH 137 (328)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSEEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEE---ECCEEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 5666789999999999888 553 23467788887 4899999995543 3999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.......
T Consensus 138 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~------------------------------------------------- 168 (328)
T 3fe3_A 138 RDLKAENLLLDADMNIKIADFGFSNEFTVGG------------------------------------------------- 168 (328)
T ss_dssp SCCCGGGEEECTTSCEEECSTTCCGGGSSSC-------------------------------------------------
T ss_pred cCCCHHHEEEcCCCCEEEeeccCceecCCCC-------------------------------------------------
Confidence 9999999999999999999999884321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCC-CccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~sDIwSlGvll~e 264 (712)
.....+||++|+|||++.+..+. .++|||||||++|+
T Consensus 169 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e 206 (328)
T 3fe3_A 169 ------------------------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206 (328)
T ss_dssp ------------------------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHH
Confidence 00115689999999999888864 79999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||...... .....+....+.. .....+...+|+.+||..||.+|||+.|+|+||||+...
T Consensus 207 ll~g~~pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 207 LVSGSLPFDGQNLK-ELRERVLRGKYRI-PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCCC-CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 999 66554433 3333333332211 112345666999999999999999999999999998653
No 29
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-33 Score=301.25 Aligned_cols=210 Identities=16% Similarity=0.254 Sum_probs=161.7
Q ss_pred eccceeeccCCCCCcccccccccccccc---cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~---~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
.++..+|++++||||+++++ ++..... ...+++++|+.|++|.++++.. .+++..+..++.||+.||.|||++|
T Consensus 72 ~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~~ 148 (367)
T 1cm8_A 72 YRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAAG 148 (367)
T ss_dssp HHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCcCCCCcee-eEecCCccccCceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 36677899999999999998 5543322 2467999999999999999553 4899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.+||+|||+++..+..
T Consensus 149 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----------------------------------------------- 181 (367)
T 1cm8_A 149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSE----------------------------------------------- 181 (367)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEECCSS-----------------------------------------------
T ss_pred ccccCcCHHHEEEcCCCCEEEEeeecccccccc-----------------------------------------------
Confidence 999999999999999999999999988432111
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvl 261 (712)
....+||++|+|||++.+ ..++.++|||||||+
T Consensus 182 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 215 (367)
T 1cm8_A 182 ----------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI 215 (367)
T ss_dssp ----------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred ----------------------------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHH
Confidence 001468999999999987 569999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcc--cCCC----------------------------chhhhcCchhHHHHHHcCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRH--RVLP----------------------------PQLLLKFPKEASFCLWLLHP 308 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~--~~~~----------------------------~~~~~~~~~~~~li~~~L~~ 308 (712)
+|||++ ||....... .+..+.. +..+ ..+....+...+||.+||..
T Consensus 216 l~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~ 294 (367)
T 1cm8_A 216 MAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVL 294 (367)
T ss_dssp HHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCS
T ss_pred HHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccC
Confidence 999999 665443322 2221111 0011 01112244566999999999
Q ss_pred CCCCCCCHHHHhcCcCCCCCcCch
Q 005147 309 EPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 309 dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
||.+|||+.++|+||||+......
T Consensus 295 dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 295 DAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp STTTSCCHHHHHHSGGGTTTC---
T ss_pred ChhHCCCHHHHhcChHHHhhcCCc
Confidence 999999999999999999876543
No 30
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-33 Score=292.74 Aligned_cols=197 Identities=21% Similarity=0.267 Sum_probs=156.4
Q ss_pred cCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 34 ~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
...||||+.+++ ++. ....+++++|+.+++|.+++...+..+++.+++.|+.||+.||+|||++||+||||||+||
T Consensus 113 ~~~h~~iv~l~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NI 188 (311)
T 3p1a_A 113 VGQHPCCVRLEQ-AWE---EGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANI 188 (311)
T ss_dssp HCCCTTBCCEEE-EEE---ETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred hcCCCcEEEEEE-EEE---eCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHE
Confidence 349999999888 553 3457899999999999999966556699999999999999999999999999999999999
Q ss_pred eecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcc
Q 005147 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (712)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~ 193 (712)
|++.++.+||+|||++...+...
T Consensus 189 ll~~~~~~kl~DFG~a~~~~~~~--------------------------------------------------------- 211 (311)
T 3p1a_A 189 FLGPRGRCKLGDFGLLVELGTAG--------------------------------------------------------- 211 (311)
T ss_dssp EECGGGCEEECCCTTCEECC------------------------------------------------------------
T ss_pred EECCCCCEEEccceeeeecccCC---------------------------------------------------------
Confidence 99999999999999874432210
Q ss_pred ccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhCCCCCCh
Q 005147 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGE 273 (712)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~pf~~~~ 273 (712)
......||+.|+|||++.+ .++.++|||||||++|||+++.....
T Consensus 212 ----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 212 ----------------------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp -------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred ----------------------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 0011458999999999876 69999999999999999998322111
Q ss_pred hhHHHHHhhcccCCCchhhhcCc-hhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 274 EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.. .....+.....++.+....+ ...+||.+||..||.+|||+.++|+||||+.
T Consensus 257 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 257 GG-EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp SH-HHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred Cc-cHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 11 22344455555655554444 4459999999999999999999999999986
No 31
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.98 E-value=1.1e-32 Score=296.17 Aligned_cols=208 Identities=15% Similarity=0.143 Sum_probs=155.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+++++ ++.. ...+++++|+ .|++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 97 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH 171 (349)
T 2w4o_A 97 TEIGVLLRLSHPNIIKLKE-IFET---PTEISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHENGIVH 171 (349)
T ss_dssp --CHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCcceee-eEec---CCeEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4556788899999999888 5532 3456777777 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++. ++.+||+|||+++......
T Consensus 172 ~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 205 (349)
T 2w4o_A 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------------------------------------------- 205 (349)
T ss_dssp CCCCGGGEEESSSSTTCCEEECCCC-------------------------------------------------------
T ss_pred cCCCcccEEEecCCCCCCEEEccCccccccCccc----------------------------------------------
Confidence 999999999975 7899999999884321110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......||+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 240 (349)
T 2w4o_A 206 ---------------------------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240 (349)
T ss_dssp ----------------------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHH
Confidence 00014689999999999998999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC--Cch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++ ||............+..... +.. .....+...+||.+||..||++|||+.++|+||||.....
T Consensus 241 ~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 241 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred HHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence 99998 66655444334444433322 112 2233445569999999999999999999999999997654
No 32
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=2.8e-33 Score=297.31 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=162.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 50 ~E~~~l~~l~hpnIv~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH 125 (321)
T 1tki_A 50 KEISILNIARHRNILHLHE-SFES---MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125 (321)
T ss_dssp HHHHHHHHSCCTTBCCEEE-EEEE---TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEeE-EEec---CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 4556788899999999888 5532 3457777777 588999999666556999999999999999999999999999
Q ss_pred ccCCCCceeecC--CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~--~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+||+++. ++.+|++|||++.......
T Consensus 126 ~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 158 (321)
T 1tki_A 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------------------------------------- 158 (321)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred CCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-----------------------------------------------
Confidence 999999999986 7899999999884431110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 194 (321)
T 1tki_A 159 --------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVY 194 (321)
T ss_dssp --------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCC--Cchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|++ ||...... ..+..+..... +.... ...+...+|+.+||..||.+|||+.|+|+||||+...
T Consensus 195 ~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 195 VLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHhCCCCCcCCCHH-HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 9998 66654443 33333333322 22222 3345556999999999999999999999999998653
No 33
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.98 E-value=9e-33 Score=308.09 Aligned_cols=241 Identities=16% Similarity=0.225 Sum_probs=160.4
Q ss_pred ccceeeccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++||||+++++ ++... .....+|+++|+.+++|.+++.... .+++..++.|+.||+.||+|||++|||
T Consensus 101 ~E~~~l~~l~h~niv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ii 178 (458)
T 3rp9_A 101 REIAILNRLNHDHVVKVLD-IVIPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAGIL 178 (458)
T ss_dssp HHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEECCCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhCCCCCCCceEE-EEecCCcccCceEEEEEeccccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCCcC
Confidence 5677889999999999998 44322 3335789999999999999996554 499999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.++.+||+|||+++..+........ .+..+ .. .++
T Consensus 179 HrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~--------~~~~~-------~~-----~~~------------- 225 (458)
T 3rp9_A 179 HRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ--------LPISP-------RE-----DDM------------- 225 (458)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCC--------CC---------------------------------
T ss_pred CCCCChhhEEECCCCCEeecccccchhccCccccccc--------cccCc-------cc-----ccc-------------
Confidence 9999999999999999999999999765433110000 00000 00 000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-cCCCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDIwSlGvll~ 263 (712)
...+++.+. .........+||++|+|||++ .+..|+.++|||||||+||
T Consensus 226 ----------------------~~~~~~~~~--------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ 275 (458)
T 3rp9_A 226 ----------------------NLVTFPHTK--------NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFA 275 (458)
T ss_dssp -------------------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred ----------------------ccccccccc--------cccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHH
Confidence 000000000 000011236899999999986 4556999999999999999
Q ss_pred HhhC-------------CCCCChh--------------------hHHHHHhhcc--cC--------------------C-
Q 005147 264 ELFC-------------PFSTGEE--------------------KTRTMSSLRH--RV--------------------L- 287 (712)
Q Consensus 264 eLl~-------------pf~~~~~--------------------~~~~~~~~~~--~~--------------------~- 287 (712)
||++ |+++... ....+..+.. +. .
T Consensus 276 elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 355 (458)
T 3rp9_A 276 ELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFP 355 (458)
T ss_dssp HHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSC
T ss_pred HHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcC
Confidence 9995 2221111 0011111000 00 0
Q ss_pred -------CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 288 -------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 288 -------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
...+....+...+||.+||..||.+|||+.|+|+||||+......
T Consensus 356 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~ 407 (458)
T 3rp9_A 356 KREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAE 407 (458)
T ss_dssp CCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGG
T ss_pred CCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCc
Confidence 011122245566999999999999999999999999999876543
No 34
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.98 E-value=3.2e-33 Score=299.70 Aligned_cols=207 Identities=20% Similarity=0.324 Sum_probs=156.4
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+|+.++||||+++++ ++.. ...+++++|+. |++|.+++...+ .+++.+++.|+.||+.||+|||++||+
T Consensus 56 ~~Ei~~l~~l~hpnIv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~giv 130 (347)
T 3zgw_A 56 KTEIEALKNLRHQHICQLYH-VLET---ANKIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQGYA 130 (347)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEEe---CCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 35667889999999999888 5532 34577888875 999999995443 499999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+||+|||++....... +.
T Consensus 131 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------------------------------~~------------- 164 (347)
T 3zgw_A 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK---------------------------------DY------------- 164 (347)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBC-----------------------------------------------------
T ss_pred eCCccHHHEEEcCCCCEEEEeccCcccccCCC---------------------------------Cc-------------
Confidence 99999999999999999999999874321110 00
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~ 263 (712)
.....+||++|+|||++.+..+ +.++|||||||++|
T Consensus 165 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ 201 (347)
T 3zgw_A 165 -------------------------------------------HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLY 201 (347)
T ss_dssp --------------------------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHH
Confidence 0011468999999999988875 89999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|++ ||...... .....+....++. .....+...+||.+||..||.+|||+.|+++||||...
T Consensus 202 ell~g~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~ 267 (347)
T 3zgw_A 202 VLMCGFLPFDDDNVM-ALYKKIMRGKYDV-PKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267 (347)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHTCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred HHHHCCCCCCCCCHH-HHHHHHHcCCCCC-CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence 9999 66554333 3333333332221 11234556699999999999999999999999999764
No 35
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.98 E-value=1.4e-32 Score=295.40 Aligned_cols=219 Identities=15% Similarity=0.203 Sum_probs=163.7
Q ss_pred ccceeeccCCCCCcccccccccccccc-----cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAA-----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~-----~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+|..++||||+++++ ++..... ...+++++|+.+++|.+.+......+++.+++.|+.||+.||+|||++
T Consensus 65 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 143 (351)
T 3mi9_A 65 REIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 143 (351)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCCcccHhh-eeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 5667888999999999988 5543322 456899999988899998876666699999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.+||+|||++.........
T Consensus 144 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------- 180 (351)
T 3mi9_A 144 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS------------------------------------------- 180 (351)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS-------------------------------------------
T ss_pred CeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc-------------------------------------------
Confidence 9999999999999999999999999998544221000
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGv 260 (712)
.+.......||++|+|||++.+. .++.++|||||||
T Consensus 181 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 217 (351)
T 3mi9_A 181 -------------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 217 (351)
T ss_dssp -------------------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHH
T ss_pred -------------------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHH
Confidence 00000114689999999999764 4899999999999
Q ss_pred HHHHhhC---CCCCChhhHH--HHHhhcccCCCchhhh----------------------------cCchhHHHHHHcCC
Q 005147 261 LLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL----------------------------KFPKEASFCLWLLH 307 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~--~~~~~~~~~~~~~~~~----------------------------~~~~~~~li~~~L~ 307 (712)
++|+|++ ||........ .+........+..+.. ..+...+||.+||.
T Consensus 218 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 297 (351)
T 3mi9_A 218 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV 297 (351)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhc
Confidence 9999999 5554433221 1122211111111100 13345699999999
Q ss_pred CCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 308 PEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 308 ~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
.||++|||+.|+|+||||+....+.
T Consensus 298 ~dP~~R~t~~e~l~hp~f~~~~~~~ 322 (351)
T 3mi9_A 298 LDPAQRIDSDDALNHDFFWSDPMPS 322 (351)
T ss_dssp SSGGGSCCHHHHHTSGGGGSSSCCC
T ss_pred CChhhCCCHHHHhCCCCcCCCCCcc
Confidence 9999999999999999998765543
No 36
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.98 E-value=1e-32 Score=288.01 Aligned_cols=208 Identities=17% Similarity=0.235 Sum_probs=157.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++. ....+++++|+.+++|.+++......+++.+++.++.||+.||+|||++||+||
T Consensus 49 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 124 (288)
T 1ob3_A 49 REISILKELKHSNIVKLYD-VIH---TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124 (288)
T ss_dssp HHHHGGGGCCCTTBCCEEE-EEE---CSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhcCCCCEeeeee-EEc---cCCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5666889999999999888 443 235789999998889999997665669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++...+....
T Consensus 125 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 155 (288)
T 1ob3_A 125 DLKPQNLLINREGELKIADFGLARAFGIPVR------------------------------------------------- 155 (288)
T ss_dssp CCCGGGEEECTTSCEEECCTTHHHHHCC----------------------------------------------------
T ss_pred CCCHHHEEEcCCCCEEEeECccccccCcccc-------------------------------------------------
Confidence 9999999999999999999998843221100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||++.+. .++.++|||||||++|||
T Consensus 156 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 194 (288)
T 1ob3_A 156 -----------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194 (288)
T ss_dssp -----------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHH
Confidence 00114679999999999765 489999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcc--cC----CC---------c-----------hh-hhcCchhHHHHHHcCCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRH--RV----LP---------P-----------QL-LLKFPKEASFCLWLLHPEPSGRPK 315 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~--~~----~~---------~-----------~~-~~~~~~~~~li~~~L~~dP~~Rpt 315 (712)
++ ||............... .. .+ + .. ....+...+||.+||..||++|||
T Consensus 195 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 274 (288)
T 1ob3_A 195 VNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT 274 (288)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC
Confidence 98 66554433222222110 00 00 0 00 112234459999999999999999
Q ss_pred HHHHhcCcCCCCC
Q 005147 316 MGELLQSEFLNEP 328 (712)
Q Consensus 316 ~~eiL~hp~~~~~ 328 (712)
+.|+|+||||+..
T Consensus 275 ~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 275 AKQALEHAYFKEN 287 (288)
T ss_dssp HHHHHTSGGGGC-
T ss_pred HHHHhcCcchhhc
Confidence 9999999999863
No 37
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.98 E-value=1.9e-32 Score=291.61 Aligned_cols=206 Identities=18% Similarity=0.259 Sum_probs=160.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...+++++|+ .|++|.+++... ..+++.+++.++.||+.||.|||++||+|
T Consensus 63 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH 137 (326)
T 2y0a_A 63 REVSILKEIQHPNVITLHE-VYEN---KTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAH 137 (326)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEe---CCEEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 5566788999999999888 5532 3456777777 589999999554 45999999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++.++ .+||+|||++.......
T Consensus 138 ~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 172 (326)
T 2y0a_A 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--------------------------------------------- 172 (326)
T ss_dssp CCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS---------------------------------------------
T ss_pred CCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC---------------------------------------------
Confidence 99999999998877 79999999884431110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......||+.|+|||++.+..++.++|||||||+
T Consensus 173 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 206 (326)
T 2y0a_A 173 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206 (326)
T ss_dssp ----------------------------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHH
Confidence 0001468999999999998899999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhccc--CCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|+|++ ||...... ..+..+... ..+.... ...+...+||.+||..||.+|||+.++|+||||+...
T Consensus 207 l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 279 (326)
T 2y0a_A 207 TYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279 (326)
T ss_dssp HHHHHHSCCSSCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred HHHHHHCcCCCCCCCHH-HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence 999998 66544332 223333222 2233332 3344555999999999999999999999999998754
No 38
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.98 E-value=9.7e-33 Score=305.37 Aligned_cols=239 Identities=15% Similarity=0.171 Sum_probs=161.9
Q ss_pred eccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+|..++||||+++++ ++.... ....+|+++|+.+++|.++++... .+++.+++.|+.||+.||.|||++||
T Consensus 73 ~~E~~~l~~l~h~nIv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~gi 150 (432)
T 3n9x_A 73 LREITILNRLKSDYIIRLYD-LIIPDDLLKFDELYIVLEIADSDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHESGI 150 (432)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEEECCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHcCCCCcceEEE-EEecCCCCcCCeEEEEEecCCcCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36777899999999999988 443321 225789999999999999996543 49999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+|||++.++.+||+|||+++........... .++.-..
T Consensus 151 vHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~---------------------------~~~~~~~-------- 195 (432)
T 3n9x_A 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV---------------------------NDLEENE-------- 195 (432)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEEC---------------------------------------------------
T ss_pred CCCCCCHHHeEECCCCCEEEccCCCccccccccccccc---------------------------ccccccc--------
Confidence 99999999999999999999999999654332100000 0000000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-cCCCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDIwSlGvll 262 (712)
. ...............+||++|+|||++ .+..|+.++|||||||++
T Consensus 196 --~-------------------------------~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il 242 (432)
T 3n9x_A 196 --E-------------------------------PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIF 242 (432)
T ss_dssp ------------------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred --c-------------------------------ccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHH
Confidence 0 000000000011236899999999986 455699999999999999
Q ss_pred HHhhC-------------CCCCChh-----------------hHHHHHhhc------------------------c--cC
Q 005147 263 FELFC-------------PFSTGEE-----------------KTRTMSSLR------------------------H--RV 286 (712)
Q Consensus 263 ~eLl~-------------pf~~~~~-----------------~~~~~~~~~------------------------~--~~ 286 (712)
|||++ |+++... ....+..+. . ..
T Consensus 243 ~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~ 322 (432)
T 3n9x_A 243 AELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHR 322 (432)
T ss_dssp HHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC
T ss_pred HHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCC
Confidence 99995 2222211 001110000 0 00
Q ss_pred CCc----hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCchHH
Q 005147 287 LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 334 (712)
Q Consensus 287 ~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~~e 334 (712)
.+. .+....+...+||.+||..||.+|||+.|+|+||||+.......+
T Consensus 323 ~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e 374 (432)
T 3n9x_A 323 KPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE 374 (432)
T ss_dssp CCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred CCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccC
Confidence 010 012234556699999999999999999999999999988665443
No 39
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.98 E-value=1.2e-32 Score=289.01 Aligned_cols=205 Identities=15% Similarity=0.195 Sum_probs=156.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+ .....+++++|+ .+++|.+++.. ..+++.+++.++.||+.||+|||++||+|
T Consensus 85 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 160 (298)
T 2zv2_A 85 QEIAILKKLDHPNVVKLVE-VLDD-PNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKIIH 160 (298)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC-SSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEc-CCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4566788999999999888 5533 234567777777 58899887633 34999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++........
T Consensus 161 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 192 (298)
T 2zv2_A 161 RDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA------------------------------------------------ 192 (298)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECSSSSC------------------------------------------------
T ss_pred cCCCHHHEEECCCCCEEEecCCCccccccccc------------------------------------------------
Confidence 99999999999999999999998854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvll 262 (712)
......||+.|+|||.+.+.. ++.++|||||||++
T Consensus 193 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l 230 (298)
T 2zv2_A 193 ------------------------------------------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230 (298)
T ss_dssp ------------------------------------------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence 000146899999999997765 47889999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
|+|++ ||...... .....+.....+ +......+...+||.+||..||.+|||+.|+|+||||+
T Consensus 231 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 231 YCFVFGQCPFMDERIM-CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHCCCCCCCccHH-HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 99998 66554332 222333322222 22223345566999999999999999999999999986
No 40
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.98 E-value=1.8e-32 Score=290.61 Aligned_cols=202 Identities=14% Similarity=0.172 Sum_probs=159.8
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|+.++||||+++++ ++.+ ...++++||+ .|++|.+++.+.. .+++..++.++.||+.||+|||++||+||
T Consensus 56 E~~~l~~l~hp~Iv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 130 (318)
T 1fot_A 56 ERLMLSIVTHPFIIRMWG-TFQD---AQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDIIYR 130 (318)
T ss_dssp HHHHHHSCCBTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEECC
T ss_pred HHHHHhhCCCCCCceEeE-EEEe---CCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 455788899999999888 5532 3467788887 5899999996543 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.+|.+||+|||+++.....
T Consensus 131 Dlkp~NIll~~~g~~kL~Dfg~a~~~~~~--------------------------------------------------- 159 (318)
T 1fot_A 131 DLKPENILLDKNGHIKITDFGFAKYVPDV--------------------------------------------------- 159 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCSSCEECSSC---------------------------------------------------
T ss_pred CCChheEEEcCCCCEEEeecCcceecCCc---------------------------------------------------
Confidence 99999999999999999999988432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
....+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 160 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 197 (318)
T 1fot_A 160 ------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 197 (318)
T ss_dssp ------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHH
Confidence 00146899999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
+ ||...... ..+..+...... ......+...++|.+||..||.+|| +++++++||||+...
T Consensus 198 ~g~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~ 266 (318)
T 1fot_A 198 AGYTPFYDSNTM-KTYEKILNAELR-FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 266 (318)
T ss_dssp HSSCTTCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred hCCCCCCCCCHH-HHHHHHHhCCCC-CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence 8 66554433 333333332211 1112334566999999999999999 899999999998753
No 41
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.98 E-value=1.6e-32 Score=291.81 Aligned_cols=211 Identities=14% Similarity=0.173 Sum_probs=159.4
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.++..+|+.+.||||+++++ ++. ....+++++|+.+++|.+++...+..+++.+++.++.||+.||.|||++||+|
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 123 (324)
T 3mtl_A 48 IREVSLLKDLKHANIVTLHD-IIH---TEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123 (324)
T ss_dssp CCCHHHHSCCCCTTBCCEEE-EEE---CSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHhcCCCCCCeeee-EEe---eCCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 35677889999999999888 543 34568999999888999999666666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++...+....
T Consensus 124 ~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------ 155 (324)
T 3mtl_A 124 RDLKPQNLLINERGELKLADFGLARAKSIPTK------------------------------------------------ 155 (324)
T ss_dssp SSCCGGGEEECTTCCEEECSSSEEECC-----------------------------------------------------
T ss_pred CCcCHHHEEECCCCCEEEccCcccccccCCcc------------------------------------------------
Confidence 99999999999999999999998853321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
......||++|+|||++.+ ..++.++|||||||++|+
T Consensus 156 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 193 (324)
T 3mtl_A 156 ------------------------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYE 193 (324)
T ss_dssp -------------------------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHH
Confidence 0001467999999999977 458999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhc--ccCCCch--------------------------hhhcCchhHHHHHHcCCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLR--HRVLPPQ--------------------------LLLKFPKEASFCLWLLHPEPSGR 313 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~--~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~R 313 (712)
|++ ||.............. ....+.. .....+...+||.+||+.||.+|
T Consensus 194 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 273 (324)
T 3mtl_A 194 MATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNR 273 (324)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccC
Confidence 999 6655443322211111 1110000 01123445699999999999999
Q ss_pred CCHHHHhcCcCCCCCcC
Q 005147 314 PKMGELLQSEFLNEPRD 330 (712)
Q Consensus 314 pt~~eiL~hp~~~~~~~ 330 (712)
||+.|+|+||||.....
T Consensus 274 ~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 274 ISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp CCHHHHTTSGGGGGGCS
T ss_pred CCHHHHhcChhhhhccc
Confidence 99999999999987654
No 42
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.98 E-value=1e-32 Score=298.50 Aligned_cols=209 Identities=15% Similarity=0.201 Sum_probs=152.1
Q ss_pred ccceeeccCCCCCcccccccccccc---cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~---~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++... .....+++++++.|++|.+++.. ..+++.+++.++.||+.||.|||++||
T Consensus 77 ~E~~~l~~l~hpnIv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~gi 153 (367)
T 2fst_X 77 RELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADI 153 (367)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEecCCccccCCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5667889999999999998 55332 12356899999999999999854 349999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||+++..+..
T Consensus 154 vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------------------------------------------------ 185 (367)
T 2fst_X 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADE------------------------------------------------ 185 (367)
T ss_dssp CCCCCCGGGEEECTTCCEEECC----------------------------------------------------------
T ss_pred eeCCCCHhhEEECCCCCEEEeecccccccccc------------------------------------------------
Confidence 99999999999999999999999988432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
....+||++|+|||++.+ ..++.++|||||||++
T Consensus 186 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 220 (367)
T 2fst_X 186 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220 (367)
T ss_dssp --------------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHH
Confidence 011468999999999987 5699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhccc--CC-----------------------C-c----hhhhcCchhHHHHHHcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHR--VL-----------------------P-P----QLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~--~~-----------------------~-~----~~~~~~~~~~~li~~~L~~d 309 (712)
|||++ ||....... .+..+... .. + . .+....+...+||.+||..|
T Consensus 221 ~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~d 299 (367)
T 2fst_X 221 AELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 299 (367)
T ss_dssp HHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSS
T ss_pred HHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCC
Confidence 99999 665543322 22111110 00 0 0 01122345569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcCch
Q 005147 310 PSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
|.+|||+.++|+||||+....+.
T Consensus 300 P~~R~t~~e~L~hp~~~~~~~~~ 322 (367)
T 2fst_X 300 SDKRITAAQALAHAYFAQYHDPD 322 (367)
T ss_dssp GGGSCCHHHHHTSGGGTTTCCGG
T ss_pred cccCcCHHHHhcChhhhhccCCC
Confidence 99999999999999999876644
No 43
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=2.9e-32 Score=291.26 Aligned_cols=206 Identities=19% Similarity=0.259 Sum_probs=160.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. ...++++||+ .|++|.+++.+. +.+++.+++.++.||+.||+|||++||+|
T Consensus 54 ~E~~~l~~l~hp~iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 128 (337)
T 1o6l_A 54 TESRVLQNTRHPFLTALKY-AFQT---HDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVY 128 (337)
T ss_dssp HHHHHHHSCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCCcCcceEE-EEEe---CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4455788899999999888 4432 3467778887 588999999543 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++.......
T Consensus 129 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~------------------------------------------------ 160 (337)
T 1o6l_A 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGA------------------------------------------------ 160 (337)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCBCSCCTTC------------------------------------------------
T ss_pred CcCCHHHEEECCCCCEEEeeccchhhcccCCC------------------------------------------------
Confidence 99999999999999999999998853211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 161 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 198 (337)
T 1o6l_A 161 ------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198 (337)
T ss_dssp ------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccChhhCChhhhcCCCCCchhhcccchhHHHHH
Confidence 00115789999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... ......+...+||.+||..||.+|| ++.++++||||....
T Consensus 199 l~g~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~ 268 (337)
T 1o6l_A 199 MCGRLPFYNQDHE-RLFELILMEEIR-FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268 (337)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred hcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence 98 66654433 333333222111 1112345566999999999999999 899999999998753
No 44
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.2e-33 Score=296.84 Aligned_cols=205 Identities=17% Similarity=0.189 Sum_probs=158.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++.. ...+++++|+.+++|.+++...+ .+++.+++.++.||+.||.|||++||+||
T Consensus 58 ~E~~~l~~l~hpnIv~l~~-~~~~---~~~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givH~ 132 (336)
T 3h4j_B 58 REISYLKLLRHPHIIKLYD-VITT---PTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVHR 132 (336)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEe---CCEEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 5566788999999999888 5533 34688999999999999985443 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++.......
T Consensus 133 Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-------------------------------------------------- 162 (336)
T 3h4j_B 133 DLKPENLLLDDNLNVKIADFGLSNIMTDGN-------------------------------------------------- 162 (336)
T ss_dssp CCSTTTEEECTTCCEEECCSSCTBTTTTSB--------------------------------------------------
T ss_pred CCchhhEEEcCCCCEEEEEeccceeccCCc--------------------------------------------------
Confidence 999999999999999999999884321110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..+ +.++|||||||++|+|
T Consensus 163 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 201 (336)
T 3h4j_B 163 -----------------------------------------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVM 201 (336)
T ss_dssp -----------------------------------------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHH
Confidence 0011468999999999988875 7899999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+..... .......+...+||.+||..||.+|||+.|+++||||+...
T Consensus 202 l~g~~Pf~~~~~~-~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 266 (336)
T 3h4j_B 202 LVGRLPFDDEFIP-NLFKKVNSCVY-VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNL 266 (336)
T ss_dssp HHSSCSSBCSSST-TCBCCCCSSCC-CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred HhCCCCCCCccHH-HHHHHHHcCCC-CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCC
Confidence 98 55432211 11111111111 11112334556999999999999999999999999998653
No 45
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97 E-value=3.3e-32 Score=284.29 Aligned_cols=207 Identities=14% Similarity=0.171 Sum_probs=163.7
Q ss_pred ccceeeccCCCCCcccccccccc-cccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG-- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~-~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g-- 102 (712)
++..+|+.+.||||+++++ ++. .......+++++|+. +++|.+++... ..+++..++.|+.||+.||.|||++|
T Consensus 74 ~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~ 151 (290)
T 1t4h_A 74 EEAEMLKGLQHPNIVRFYD-SWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHhCCCCCeeeeee-eeccccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3556788899999999988 443 233345678888885 88999999543 34899999999999999999999999
Q ss_pred ceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 103 IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 103 IvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|+||||||+||+++ .++.++|+|||++......
T Consensus 152 i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 185 (290)
T 1t4h_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---------------------------------------------- 185 (290)
T ss_dssp CCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT----------------------------------------------
T ss_pred EEECCCCHHHEEEECCCCCEEEeeCCCccccccc----------------------------------------------
Confidence 99999999999998 7889999999987422111
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||.+.+ .++.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~ 218 (290)
T 1t4h_A 186 ----------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMC 218 (290)
T ss_dssp ----------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHH
Confidence 0011468999999998864 59999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|+|++ ||............+.....+....... +...+||.+||..||.+|||+.++|+||||++.
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 219 MLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 999998 7766555555566666665555554444 455699999999999999999999999999863
No 46
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97 E-value=1.9e-32 Score=294.68 Aligned_cols=206 Identities=19% Similarity=0.225 Sum_probs=158.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++||||+++++ ++.+ ...++++||+ .|++|.+++.. .+..+++.++..|+.||+.||+|||++|
T Consensus 75 ~E~~~l~~l~hpnIv~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 150 (351)
T 3c0i_A 75 REASICHMLKHPHIVELLE-TYSS---DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150 (351)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEe---CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4556788899999999888 5533 3457778877 58999988832 2345899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 103 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
|+||||||+||+++.++. +|++|||++...+....
T Consensus 151 ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~------------------------------------------ 188 (351)
T 3c0i_A 151 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL------------------------------------------ 188 (351)
T ss_dssp EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC------------------------------------------
T ss_pred ceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe------------------------------------------
Confidence 999999999999986654 99999998854322100
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
.....+||++|+|||++.+..++.++||||||
T Consensus 189 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 220 (351)
T 3c0i_A 189 ------------------------------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCG 220 (351)
T ss_dssp ------------------------------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHHHH
Confidence 00114689999999999999999999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCC--Cchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++|+|++ ||..... .....+....+ ++.. ....+...+||.+||..||.+|||+.++|+||||+..
T Consensus 221 ~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 221 VILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 99999999 6655432 23333333322 2222 2334455699999999999999999999999999753
No 47
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.97 E-value=2.1e-32 Score=295.50 Aligned_cols=205 Identities=19% Similarity=0.212 Sum_probs=159.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++.++..++.||+.||.|||++||+|
T Consensus 77 ~E~~il~~l~hpnIv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH 151 (362)
T 2bdw_A 77 REARICRKLQHPNIVRLHD-SIQE---ESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVH 151 (362)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEe---CCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4666788899999999888 5532 3456777777 5889999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++..+ .+||+|||++.......
T Consensus 152 ~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~---------------------------------------------- 185 (362)
T 2bdw_A 152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---------------------------------------------- 185 (362)
T ss_dssp CCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----------------------------------------------
T ss_pred ccCchHHEEEecCCCCCCEEEeecCcceEecCCc----------------------------------------------
Confidence 99999999998654 59999999885432110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......||+.|+|||++.+..|+.++|||||||++
T Consensus 186 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 220 (362)
T 2bdw_A 186 ---------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220 (362)
T ss_dssp ---------------------------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHH
Confidence 00014689999999999998999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--CCch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||...... .....+.... ++.. +....+...+||.+||..||.+|||+.++|+||||...
T Consensus 221 ~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 221 YILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 99999 66544332 3333333332 2222 23334556699999999999999999999999999753
No 48
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.97 E-value=1.9e-32 Score=290.39 Aligned_cols=210 Identities=15% Similarity=0.189 Sum_probs=159.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC-----CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-----~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+++.++||||+++++ ++.. ...+++++|+.+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 52 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 127 (317)
T 2pmi_A 52 REISLMKELKHENIVRLYD-VIHT---ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127 (317)
T ss_dssp HHHHHHTTCCBTTBCCEEE-EECC---TTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCcceEEE-EEEE---CCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4566789999999999888 5432 3568899999888999998322 23489999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.+||+|||++...+....
T Consensus 128 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------- 163 (317)
T 2pmi_A 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-------------------------------------------- 163 (317)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC--------------------------------------------
T ss_pred CeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc--------------------------------------------
Confidence 999999999999999999999999998854322100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGv 260 (712)
......||+.|+|||++.+. .++.++|||||||
T Consensus 164 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 197 (317)
T 2pmi_A 164 ----------------------------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGC 197 (317)
T ss_dssp ----------------------------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred ----------------------------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHHHHH
Confidence 00014679999999999764 5899999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcc--cCCC----------------------ch--------h-hhcCchhHHHHHH
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRH--RVLP----------------------PQ--------L-LLKFPKEASFCLW 304 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~--~~~~----------------------~~--------~-~~~~~~~~~li~~ 304 (712)
++|||++ ||........ ...+.. +..+ .. . ....+...+||.+
T Consensus 198 il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 276 (317)
T 2pmi_A 198 ILAEMITGKPLFPGTNDEEQ-LKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHG 276 (317)
T ss_dssp HHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHH
Confidence 9999998 6655443322 211111 0000 00 0 0122345599999
Q ss_pred cCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 305 LLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 305 ~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||..||.+|||+.|+|+||||+.....
T Consensus 277 ~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 303 (317)
T 2pmi_A 277 LLQLNPDMRLSAKQALHHPWFAEYYHH 303 (317)
T ss_dssp HSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred HCCCCcccCCCHHHHhCChhhhcccch
Confidence 999999999999999999999987654
No 49
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.97 E-value=2.7e-32 Score=302.00 Aligned_cols=205 Identities=18% Similarity=0.216 Sum_probs=160.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++. ....+++++|+ .|++|.+++.... .+++.++..+++||+.||.|||++||+|
T Consensus 59 ~E~~il~~l~hpnIv~l~~-~~~---~~~~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~givH 133 (444)
T 3soa_A 59 REARICRLLKHPNIVRLHD-SIS---EEGHHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVH 133 (444)
T ss_dssp HHHHHHHHCCBTTBCCEEE-EEE---CSSEEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHhCCCcCCCeEEE-EEE---ECCEEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5666788999999999888 553 33466777777 5889999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+|||++ .++.+||+|||++........
T Consensus 134 rDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~--------------------------------------------- 168 (444)
T 3soa_A 134 RNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--------------------------------------------- 168 (444)
T ss_dssp CCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC---------------------------------------------
T ss_pred cCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc---------------------------------------------
Confidence 99999999998 457899999998854322100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......||+.|+|||++.+..|+.++|||||||++
T Consensus 169 ---------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvil 203 (444)
T 3soa_A 169 ---------------------------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203 (444)
T ss_dssp ---------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHHHHH
Confidence 00114689999999999998999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC--Cc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL--PP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|+|++ ||..... ......+....+ +. .+....+...+||.+||..||.+|||+.|+|+||||+.
T Consensus 204 yell~G~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 204 YILLVGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HHHHHSSCSCCCSSH-HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HHHHhCCCCCCCccH-HHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 99999 6654433 333444443322 22 22334456669999999999999999999999999974
No 50
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=1.7e-32 Score=291.61 Aligned_cols=210 Identities=13% Similarity=0.142 Sum_probs=161.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+. |++|.+++.... .+++.+++.|+.||+.||+|||++||+|
T Consensus 54 ~E~~~l~~l~hpnIv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~givH 128 (323)
T 3tki_A 54 KEICINKMLNHENVVKFYG-HRR---EGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGITH 128 (323)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEe---cCCeEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4556788899999999888 543 234567777774 889999996543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 129 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----------------------------------------------- 161 (323)
T 3tki_A 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRE----------------------------------------------- 161 (323)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECEETTEE-----------------------------------------------
T ss_pred cccchHHEEEeCCCCEEEEEeeccceeccCCcc-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.......||+.|+|||++.+..+ +.++|||||||++|+
T Consensus 162 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 200 (323)
T 3tki_A 162 -----------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 200 (323)
T ss_dssp -----------------------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHH
Confidence 00011468999999999988775 789999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhccc-CCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||................ ...+......+...+||.+||..||.+|||+.|+++||||+...
T Consensus 201 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 201 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 999 665444332333333222 22222333445566999999999999999999999999998654
No 51
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.7e-32 Score=299.32 Aligned_cols=215 Identities=16% Similarity=0.144 Sum_probs=152.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC--------CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~--------~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+|..+.||||+.+++ ++. ......+++++|+.+++|.+++.. ....+++.+++.|++||+.||.||
T Consensus 67 ~E~~~l~~l~hpniv~~~~-~~~-~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L 144 (405)
T 3rgf_A 67 REIALLRELKHPNVISLQK-VFL-SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144 (405)
T ss_dssp HHHHHHHHCCCTTBCCCCE-EEE-ETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeeeEee-EEe-cCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 5667889999999999988 442 223457899999998999998831 122489999999999999999999
Q ss_pred hhcCceeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 99 HSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|++||+||||||+|||+ +..+.+||+|||+++..+..... .
T Consensus 145 H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~--- 189 (405)
T 3rgf_A 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L--- 189 (405)
T ss_dssp HHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--------------------------------------------
T ss_pred HhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc--------------------------------c---
Confidence 99999999999999999 67789999999998543221000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCcc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCAS 253 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~s 253 (712)
......+||++|+|||++.+.. ++.++
T Consensus 190 ----------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 217 (405)
T 3rgf_A 190 ----------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAI 217 (405)
T ss_dssp -----------------------------------------------------------CCCTTCCHHHHTTCCSCCHHH
T ss_pred ----------------------------------------------------ccCCCceecCcccCchhhcCCCcccchh
Confidence 0001157899999999998754 99999
Q ss_pred chHHHHHHHHHhhC---CCCCChhh--------HHHHHhhc---ccCCCchh----------------------------
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLR---HRVLPPQL---------------------------- 291 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~--------~~~~~~~~---~~~~~~~~---------------------------- 291 (712)
|||||||++|||++ ||...... ...+..+. .......+
T Consensus 218 DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (405)
T 3rgf_A 218 DIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIK 297 (405)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHH
T ss_pred hhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhh
Confidence 99999999999998 56433221 01111110 00000000
Q ss_pred ------hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 292 ------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 292 ------~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
....+...+||.+||..||.+|||+.|+|+||||.....
T Consensus 298 ~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~ 342 (405)
T 3rgf_A 298 YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL 342 (405)
T ss_dssp HHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred hHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence 001344559999999999999999999999999987644
No 52
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.97 E-value=3.7e-32 Score=295.82 Aligned_cols=208 Identities=19% Similarity=0.271 Sum_probs=162.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++.+++.++.||+.||+|||++||+|
T Consensus 97 ~E~~il~~l~hpnIv~~~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 172 (387)
T 1kob_A 97 NEISIMNQLHHPKLINLHD-AFED---KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172 (387)
T ss_dssp HHHHHHTTCCSTTBCCEEE-EEEC---SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCcCCCeEEE-EEEe---CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 4566788999999999888 5532 3457777777 589999999766656999999999999999999999999999
Q ss_pred ccCCCCceeecC--CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~--~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+|||++. .+.+||+|||++........
T Consensus 173 rDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~---------------------------------------------- 206 (387)
T 1kob_A 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---------------------------------------------- 206 (387)
T ss_dssp CCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC----------------------------------------------
T ss_pred cccchHHeEEecCCCCceEEEecccceecCCCcc----------------------------------------------
Confidence 999999999974 46799999998854321100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 207 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 241 (387)
T 1kob_A 207 ---------------------------------------------VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGY 241 (387)
T ss_dssp ---------------------------------------------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred ---------------------------------------------eeeeccCCCccCchhccCCCCCCcccEeeHhHHHH
Confidence 01146899999999999989999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC--CCch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV--LPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++ ||...... ..+..+.... .+.. +....+...+||.+||..||.+|||+.++|+||||+....
T Consensus 242 elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 242 VLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 9999 66554433 3333333222 2222 2233455669999999999999999999999999987543
No 53
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.97 E-value=2.7e-32 Score=293.02 Aligned_cols=206 Identities=16% Similarity=0.140 Sum_probs=162.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|+.+.||||+++++ ++.. ...+++++|+..++|.+++......+++.++..++.||+.||.|||++||+||
T Consensus 103 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 178 (348)
T 1u5q_A 103 KEVRFLQKLRHPNTIQYRG-CYLR---EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178 (348)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEE---CCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 4556788899999999888 5432 35688999998889999885444569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++......
T Consensus 179 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--------------------------------------------------- 207 (348)
T 1u5q_A 179 DVKAGNILLSEPGLVKLGDFGSASIMAPA--------------------------------------------------- 207 (348)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCBSSSSB---------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEeeccCceecCCC---------------------------------------------------
Confidence 99999999999999999999988432110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll~ 263 (712)
....||+.|+|||++. +..++.++|||||||++|
T Consensus 208 -------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ 244 (348)
T 1u5q_A 208 -------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 244 (348)
T ss_dssp -------------------------------------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHH
T ss_pred -------------------------------------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHH
Confidence 0146899999999984 456899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||++ ||.......... .+.....+......+ +...+||.+||..||.+|||+.++|+||||.....+
T Consensus 245 ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~ 315 (348)
T 1u5q_A 245 ELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPP 315 (348)
T ss_dssp HHHHSSCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCT
T ss_pred HHHhCCCCCCCCChHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCc
Confidence 9999 665544433332 333333333222233 345599999999999999999999999999876553
No 54
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=6.3e-32 Score=286.90 Aligned_cols=207 Identities=17% Similarity=0.270 Sum_probs=161.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.+.||||+.+++ ++.. ...+++++|+ .|++|.+++... .+++.++..++.||+.||.|||++||+|
T Consensus 91 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH 164 (321)
T 2c30_A 91 NEVVIMRDYQHFNVVEMYK-SYLV---GEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVIH 164 (321)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCcceEEE-EEEE---CCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4556788899999999888 4432 2456777777 599999998543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||++........
T Consensus 165 ~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 196 (321)
T 2c30_A 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------------------------------------------------ 196 (321)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECCSSSC------------------------------------------------
T ss_pred CCCCHHHEEECCCCcEEEeeeeeeeecccCcc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||++.+..++.++|||||||++|||
T Consensus 197 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el 234 (321)
T 2c30_A 197 ------------------------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234 (321)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence 00114689999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... ..+..+.....+. ......+...+|+.+||..||++|||+.++|+||||.....
T Consensus 235 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~ 303 (321)
T 2c30_A 235 VDGEPPYFSDSPV-QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGL 303 (321)
T ss_dssp HHSSCTTTTSCHH-HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCC
T ss_pred HhCCCCCCCCCHH-HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCCC
Confidence 98 66544332 3344444333222 11223345569999999999999999999999999986543
No 55
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=1.2e-32 Score=296.19 Aligned_cols=205 Identities=17% Similarity=0.263 Sum_probs=156.8
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|..+ +||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.|+.||+.||+|||++||+|
T Consensus 73 E~~il~~~~~hp~Iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givH 147 (353)
T 3txo_A 73 EKRILSLARNHPFLTQLFC-CFQT---PDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIY 147 (353)
T ss_dssp HHHHHHHTTTCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHhccCCCceeeEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 33455555 8999999888 5532 3457778887 5899999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++......
T Consensus 148 rDlkp~NILl~~~g~ikL~DFG~a~~~~~~~------------------------------------------------- 178 (353)
T 3txo_A 148 RDLKLDNVLLDHEGHCKLADFGMCKEGICNG------------------------------------------------- 178 (353)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCBCSCC---------------------------------------------------
T ss_pred cCCCHHHEEECCCCCEEEccccceeecccCC-------------------------------------------------
Confidence 9999999999999999999999885321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+||+.|+|||++.+..|+.++|||||||++|||
T Consensus 179 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 217 (353)
T 3txo_A 179 -----------------------------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM 217 (353)
T ss_dssp ------------------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHH
Confidence 000115789999999999888899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH------HHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~eiL~hp~~~~~~ 329 (712)
++ ||...... ..+..+....... .....+...+||.+||..||.+||++ .++++||||+...
T Consensus 218 l~G~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~ 288 (353)
T 3txo_A 218 LCGHAPFEAENED-DLFEAILNDEVVY-PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288 (353)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCCCCC-CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence 98 67655443 3334433332211 11234556699999999999999998 8999999999763
No 56
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97 E-value=2.6e-32 Score=298.80 Aligned_cols=205 Identities=19% Similarity=0.251 Sum_probs=151.3
Q ss_pred ccCCCCCccccccccccc-ccccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 33 THGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 33 ~~~~H~ni~~~~~~~~~~-~~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
...+||||+++++ +|+. ......++++||+. |++|.++|... ...+++.+++.|+.||+.||+|||++||+|||||
T Consensus 110 ~~~~hp~iv~l~~-~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk 188 (400)
T 1nxk_A 110 RASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 188 (400)
T ss_dssp HHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred HhcCCCCcceEeE-EEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcC
Confidence 4568999999988 5532 22345678888884 88999999554 3459999999999999999999999999999999
Q ss_pred CCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 110 PSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 110 P~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|+|||++. ++.+||+|||+++......
T Consensus 189 p~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------------- 218 (400)
T 1nxk_A 189 PENLLYTSKRPNAILKLTDFGFAKETTSHN-------------------------------------------------- 218 (400)
T ss_dssp GGGEEESSSSTTCCEEECCCTTCEECC-----------------------------------------------------
T ss_pred cceEEEecCCCCccEEEEecccccccCCCC--------------------------------------------------
Confidence 99999997 7889999999884321110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.....+||++|+|||++.+..|+.++|||||||++|||+
T Consensus 219 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 257 (400)
T 1nxk_A 219 -----------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 257 (400)
T ss_dssp -------------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH
Confidence 001146899999999999889999999999999999999
Q ss_pred C---CCCCChhhH---HHHHhhccc--CCCc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKT---RTMSSLRHR--VLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~---~~~~~~~~~--~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+ ||....... .....+... .++. .+....+...+||.+||..||.+|||+.++|+||||....
T Consensus 258 ~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 329 (400)
T 1nxk_A 258 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 329 (400)
T ss_dssp HSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred hCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence 9 665432211 011222222 1222 2223345566999999999999999999999999997643
No 57
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.97 E-value=1.9e-32 Score=291.86 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=154.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+|..++||||+++++ ++. ....+++++|+.+++|.+++.... .+++.+++.|++||+.||+|||++||+||
T Consensus 82 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~ivH~ 156 (329)
T 3gbz_A 82 REVSLLKELQHRNIIELKS-VIH---HNHRLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCLHR 156 (329)
T ss_dssp HHHHHGGGCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHcCCCCcceEEE-EEe---cCCEEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEECC
Confidence 5667889999999999888 443 345688999998889999995544 39999999999999999999999999999
Q ss_pred cCCCCceeec-----CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 107 NVRPSCFVMS-----SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 107 DLkP~NIll~-----~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||+||+++ ..+.+||+|||++...+....
T Consensus 157 Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------------- 192 (329)
T 3gbz_A 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR-------------------------------------------- 192 (329)
T ss_dssp CCCGGGEEEEC-----CCEEEECCTTHHHHHC------------------------------------------------
T ss_pred CCCHHHEEEecCCCCccceEEECcCCCccccCCccc--------------------------------------------
Confidence 9999999995 445599999998843221100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 260 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGv 260 (712)
......||+.|+|||++.+.. ++.++|||||||
T Consensus 193 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 226 (329)
T 3gbz_A 193 ----------------------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIAC 226 (329)
T ss_dssp -----------------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHH
Confidence 001146799999999998755 899999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCch---------------------------hhh-cCchhHHHHHHcCCCC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---------------------------LLL-KFPKEASFCLWLLHPE 309 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~-~~~~~~~li~~~L~~d 309 (712)
++|||++ ||..................|.. ... ..+...+||.+||..|
T Consensus 227 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 306 (329)
T 3gbz_A 227 IWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD 306 (329)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS
T ss_pred HHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC
Confidence 9999998 66554443332222211111100 001 2234459999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCc
Q 005147 310 PSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~ 329 (712)
|.+|||+.|+|+||||+...
T Consensus 307 P~~R~t~~e~l~hp~f~~~~ 326 (329)
T 3gbz_A 307 PVKRISAKNALEHPYFSHND 326 (329)
T ss_dssp GGGSCCHHHHHTSGGGSSSC
T ss_pred hhhCCCHHHHhCCcccCCCC
Confidence 99999999999999998753
No 58
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97 E-value=3.9e-32 Score=291.92 Aligned_cols=203 Identities=12% Similarity=0.086 Sum_probs=160.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.|+.||+.||+|||++||+|
T Consensus 90 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 164 (350)
T 1rdq_E 90 NEKRILQAVNFPFLVKLEF-SFKD---NSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIY 164 (350)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEc---CCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3455788899999999887 4432 3467788887 4899999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++.....
T Consensus 165 rDlkp~NIll~~~g~~kL~DFg~a~~~~~~-------------------------------------------------- 194 (350)
T 1rdq_E 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGR-------------------------------------------------- 194 (350)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------------
T ss_pred ccCccceEEECCCCCEEEcccccceeccCC--------------------------------------------------
Confidence 999999999999999999999988432111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 195 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 231 (350)
T 1rdq_E 195 -------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231 (350)
T ss_dssp -------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHH
Confidence 0014689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
++ ||...... ..+..+...... ......+...+||.+||..||.+||+ +++|++||||....
T Consensus 232 l~g~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~ 301 (350)
T 1rdq_E 232 AAGYPPFFADQPI-QIYEKIVSGKVR-FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301 (350)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred hhCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence 98 66554432 334444333221 11223455669999999999999998 99999999998653
No 59
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=5.1e-32 Score=283.90 Aligned_cols=227 Identities=22% Similarity=0.309 Sum_probs=162.7
Q ss_pred ccceeeccCCCCCcccccccccccc----------cccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE----------AAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 95 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~----------~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l 95 (712)
++..+++.++||||+++++ ++.+. .....+++++|+. |++|.+++......+++.+++.++.||+.||
T Consensus 51 ~E~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 129 (303)
T 1zy4_A 51 SEVMLLASLNHQYVVRYYA-AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129 (303)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCchHHHHHHH-HHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence 4556788899999999887 33222 1234677888875 8899999965555688999999999999999
Q ss_pred HHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccccccc
Q 005147 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (712)
Q Consensus 96 ~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~ 175 (712)
.|||++||+||||||+||+++.++.++++|||++.............. ..+
T Consensus 130 ~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~-------------------------~~~---- 180 (303)
T 1zy4_A 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS-------------------------QNL---- 180 (303)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-----------------------------------------
T ss_pred HHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcccc-------------------------ccc----
Confidence 999999999999999999999999999999999865432210000000 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccc
Q 005147 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 254 (712)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sD 254 (712)
...........|++.|+|||.+.+. .++.++|
T Consensus 181 -----------------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 213 (303)
T 1zy4_A 181 -----------------------------------------------PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKID 213 (303)
T ss_dssp ------------------------------------------------------------CTTSCHHHHTSCSCCCTHHH
T ss_pred -----------------------------------------------cccccccccCCCcccccCcccccCCCCCcchhh
Confidence 0000001125689999999999765 5899999
Q ss_pred hHHHHHHHHHhhCCCCCChhhHHHHHhhccc--CCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 255 IYRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 255 IwSlGvll~eLl~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||||||++|+|++||............+... ..|+.+.... +...+++.+||..||.+|||+.++++||||+....
T Consensus 214 i~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 292 (303)
T 1zy4_A 214 MYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292 (303)
T ss_dssp HHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCH
T ss_pred HHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCCh
Confidence 9999999999999988765555555544432 2333333333 33559999999999999999999999999987543
No 60
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97 E-value=2.6e-32 Score=301.22 Aligned_cols=209 Identities=16% Similarity=0.194 Sum_probs=163.1
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++||||+.+++ ++.+ ...++++||+ .|++|.++|.+....+++..++.|+.||+.||+|||++|||||
T Consensus 124 E~~il~~~~hp~Iv~l~~-~~~~---~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHr 199 (437)
T 4aw2_A 124 ERDVLVNGDSKWITTLHY-AFQD---DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199 (437)
T ss_dssp HHHHHHHSCTTTBCCEEE-EEEC---SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhCCCCCEEEEEE-EEee---CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence 344677899999999888 5533 3457888887 5999999997655569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||||+.++.+||+|||+++.......
T Consensus 200 DLKp~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------------- 230 (437)
T 4aw2_A 200 DIKPDNILMDMNGHIRLADFGSCLKLMEDGT------------------------------------------------- 230 (437)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSC-------------------------------------------------
T ss_pred ccCHHHeeEcCCCCEEEcchhhhhhcccCCC-------------------------------------------------
Confidence 9999999999999999999998854321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 261 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvl 261 (712)
......+||++|+|||++. ...|+.++|||||||+
T Consensus 231 ----------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvi 270 (437)
T 4aw2_A 231 ----------------------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC 270 (437)
T ss_dssp ----------------------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHH
T ss_pred ----------------------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHH
Confidence 0001147899999999997 4569999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhc----ccCCCchhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLR----HRVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~~~ 330 (712)
+|||++ ||...... ..+..+. ...+|.......+...+||.+||..+|++ ||+++|+++||||+....
T Consensus 271 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w 347 (437)
T 4aw2_A 271 MYEMLYGETPFYAESLV-ETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDW 347 (437)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred HHHHHhCCCCCCCCChh-HHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCH
Confidence 999999 77655433 2233322 12334433344566679999999998888 999999999999997644
No 61
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=4e-32 Score=292.92 Aligned_cols=193 Identities=17% Similarity=0.247 Sum_probs=146.6
Q ss_pred CCCCcccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCcee
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIl 114 (712)
+||||+++++ ++. ....+++++|+.|++|.+++.. ....+++.+++.|+.||+.||+|||++||+||||||+|||
T Consensus 94 ~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 169 (360)
T 3llt_A 94 NNNNIVKYHG-KFM---YYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENIL 169 (360)
T ss_dssp TGGGBCCEEE-EEE---ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred CCCCeecccc-eee---ECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEE
Confidence 5999999888 443 2356889999999999999943 3345899999999999999999999999999999999999
Q ss_pred ecC-------------------------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 115 MSS-------------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 115 l~~-------------------------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
++. .+.+||+|||++......
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---------------------------------- 215 (360)
T 3llt_A 170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---------------------------------- 215 (360)
T ss_dssp ESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----------------------------------
T ss_pred EccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----------------------------------
Confidence 975 667888887776321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.....||+.|+|||++.+..+
T Consensus 216 -----------------------------------------------------------~~~~~gt~~y~aPE~~~~~~~ 236 (360)
T 3llt_A 216 -----------------------------------------------------------HGSIINTRQYRAPEVILNLGW 236 (360)
T ss_dssp -----------------------------------------------------------CCSCCSCGGGCCHHHHTTCCC
T ss_pred -----------------------------------------------------------CcCccCcccccCcHHHcCCCC
Confidence 001468999999999999999
Q ss_pred CCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcc--cCCCchh---------------------------------
Q 005147 250 SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQL--------------------------------- 291 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~--~~~~~~~--------------------------------- 291 (712)
+.++|||||||++|+|++ ||....... .+..+.. ...|...
T Consensus 237 ~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 315 (360)
T 3llt_A 237 DVSSDMWSFGCVLAELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIK 315 (360)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHH
T ss_pred CCccchHHHHHHHHHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhh
Confidence 999999999999999998 665543322 1111111 1111110
Q ss_pred ----------hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 292 ----------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 292 ----------~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
....+...+||.+||+.||.+|||+.|+|+||||+
T Consensus 316 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred hhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 00113344899999999999999999999999995
No 62
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=4e-32 Score=294.85 Aligned_cols=206 Identities=16% Similarity=0.185 Sum_probs=157.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+.+++ ++.+ ...+++++++ .|++|.+++.... .+++.+++.|+.||+.||.|||++||+|
T Consensus 64 ~E~~il~~l~hp~Iv~l~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givH 138 (384)
T 4fr4_A 64 KELQIMQGLEHPFLVNLWY-SFQD---EEDMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQRIIH 138 (384)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEe---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 4556788899999999888 5532 2356777776 5999999996544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||++.......
T Consensus 139 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~------------------------------------------------- 169 (384)
T 4fr4_A 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRET------------------------------------------------- 169 (384)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTC-------------------------------------------------
T ss_pred ccCcHHHeEECCCCCEEEeccceeeeccCCC-------------------------------------------------
Confidence 9999999999999999999999885332110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+ ..|+.++|||||||++
T Consensus 170 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il 207 (384)
T 4fr4_A 170 ------------------------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207 (384)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHH
T ss_pred ------------------------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHH
Confidence 0011578999999999964 4589999999999999
Q ss_pred HHhhC---CCCCChh--hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-HHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~eiL~hp~~~~~~ 329 (712)
|||++ ||..... .......+.... ........+...+||.+||..||.+||+ ++++++||||+...
T Consensus 208 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~ 279 (384)
T 4fr4_A 208 YELLRGRRPYHIRSSTSSKEIVHTFETTV-VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279 (384)
T ss_dssp HHHHHSSCSSCCCTTSCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred HHHHhCCCCCCCCCCccHHHHHHHHhhcc-cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence 99998 6653221 122222222221 1111223345569999999999999998 99999999999764
No 63
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=3.3e-32 Score=296.51 Aligned_cols=204 Identities=18% Similarity=0.236 Sum_probs=154.7
Q ss_pred eeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 30 VELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 30 ~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
.+|.. .+||||+++++ ++.+ ...+++++|+ .|++|.+++.+. +.+++..++.|+.||+.||+|||++||+|||
T Consensus 104 ~il~~~~~hp~Iv~l~~-~~~~---~~~~~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrD 178 (396)
T 4dc2_A 104 HVFEQASNHPFLVGLHS-CFQT---ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRD 178 (396)
T ss_dssp HHHHHHTTCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred HHHHhcCCCCCcCeeEE-EEEE---CCEEEEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecc
Confidence 34544 48999999888 5532 3457777777 589999999554 3499999999999999999999999999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+|||++.+|.+||+|||+++......
T Consensus 179 LKp~NILl~~~g~ikL~DFGla~~~~~~~--------------------------------------------------- 207 (396)
T 4dc2_A 179 LKLDNVLLDSEGHIKLTDYGMCKEGLRPG--------------------------------------------------- 207 (396)
T ss_dssp CCGGGEEECTTSCEEECCCTTCBCCCCTT---------------------------------------------------
T ss_pred CCHHHEEECCCCCEEEeecceeeecccCC---------------------------------------------------
Confidence 99999999999999999999985321110
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
......+||+.|+|||++.+..|+.++|||||||++|||++
T Consensus 208 ---------------------------------------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~ 248 (396)
T 4dc2_A 208 ---------------------------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248 (396)
T ss_dssp ---------------------------------------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence 00011578999999999999999999999999999999999
Q ss_pred ---CCCCCh--------hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH------HHHhcCcCCCCCc
Q 005147 268 ---PFSTGE--------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEPR 329 (712)
Q Consensus 268 ---pf~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~eiL~hp~~~~~~ 329 (712)
||.... ........+..... .......+...+||.+||+.||.+||++ .+|++||||+...
T Consensus 249 G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~ 326 (396)
T 4dc2_A 249 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 326 (396)
T ss_dssp SSCSSTTTTC------CCHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred CCCCCcccccccccchhhHHHHHHHHhcccc-CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence 664211 11112222222211 1112234556699999999999999985 7999999998764
No 64
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=3.4e-32 Score=281.93 Aligned_cols=205 Identities=18% Similarity=0.260 Sum_probs=153.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++. ....+++++|+.+++|.+++.... .+++.+++.++.||+.||.|||++||+||
T Consensus 62 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 136 (275)
T 2eue_A 62 REISYLRLLRHPHIIKLYD-VIK---SKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHR 136 (275)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSCEEEEEECCCEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHhCCCCCeEEEEE-EEe---cCCeEEEEehhcCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeec
Confidence 5566788899999999888 543 234688999999999999985554 49999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||++.......
T Consensus 137 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------------- 166 (275)
T 2eue_A 137 DLKPENLLLDEHLNVKIADFGLSNIMTDGN-------------------------------------------------- 166 (275)
T ss_dssp CCSGGGEEECTTSCEEECCSSCC---------------------------------------------------------
T ss_pred cCChHhEEECCCCCEEEeecccceeccCcc--------------------------------------------------
Confidence 999999999999999999999884321110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||.+.+..+ +.++|||||||++|+|
T Consensus 167 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 205 (275)
T 2eue_A 167 -----------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 205 (275)
T ss_dssp -------------------------------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHH
Confidence 0001357999999999988775 7899999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+.....+ ......+...+|+.+||+.||.+|||+.|+|+||||+...
T Consensus 206 ~~g~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~~ 270 (275)
T 2eue_A 206 LCRRLPFDDESIP-VLFKNISNGVYT-LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDL 270 (275)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecccc
Confidence 98 66554433 233333332221 1122345566999999999999999999999999998754
No 65
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=9.4e-32 Score=288.59 Aligned_cols=209 Identities=14% Similarity=0.167 Sum_probs=160.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..++||||+++++ ++. ....+++++|+.+++|.+++......+++.++..++.||+.||+|||++||+||
T Consensus 61 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 136 (346)
T 1ua2_A 61 REIKLLQELSHPNIIGLLD-AFG---HKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136 (346)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC---CTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHhhCCCCCCCeEEE-EEe---eCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECC
Confidence 4566788899999999888 553 234678899998889999997766679999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||+++..+....
T Consensus 137 Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------- 167 (346)
T 1ua2_A 137 DLKPNNLLLDENGVLKLADFGLAKSFGSPNR------------------------------------------------- 167 (346)
T ss_dssp CCCGGGEEECTTCCEEECCCGGGSTTTSCCC-------------------------------------------------
T ss_pred CCCHHHEEEcCCCCEEEEecccceeccCCcc-------------------------------------------------
Confidence 9999999999999999999999854322100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHHh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFEL 265 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eL 265 (712)
......||++|+|||++.+.. ++.++|||||||++|||
T Consensus 168 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 206 (346)
T 1ua2_A 168 -----------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206 (346)
T ss_dssp -----------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHH
Confidence 001146899999999997654 89999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhccc-CCC--ch-----------------------h-hhcCchhHHHHHHcCCCCCCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHR-VLP--PQ-----------------------L-LLKFPKEASFCLWLLHPEPSGRPK 315 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~-~~~--~~-----------------------~-~~~~~~~~~li~~~L~~dP~~Rpt 315 (712)
++ ||...... ..+..+... ..+ .. . ....+...+||.+||..||.+|||
T Consensus 207 l~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 285 (346)
T 1ua2_A 207 LLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 285 (346)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred HHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence 98 44333322 222222110 000 00 0 112244569999999999999999
Q ss_pred HHHHhcCcCCCCCcC
Q 005147 316 MGELLQSEFLNEPRD 330 (712)
Q Consensus 316 ~~eiL~hp~~~~~~~ 330 (712)
+.|+|+||||+....
T Consensus 286 ~~ell~h~~f~~~~~ 300 (346)
T 1ua2_A 286 ATQALKMKYFSNRPG 300 (346)
T ss_dssp HHHHHTSGGGTSSSC
T ss_pred HHHHhcChhhhcCCC
Confidence 999999999987544
No 66
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.97 E-value=2.8e-32 Score=295.61 Aligned_cols=206 Identities=17% Similarity=0.208 Sum_probs=160.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. ...+++++|+ .|++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 135 ~E~~~l~~l~hpnIv~~~~-~~~~---~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 210 (373)
T 2x4f_A 135 NEISVMNQLDHANLIQLYD-AFES---KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILH 210 (373)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4556788899999999888 5532 3457778877 589999999655556999999999999999999999999999
Q ss_pred ccCCCCceee--cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVM--SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll--~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+|||+ +..+.+||+|||+++......
T Consensus 211 ~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----------------------------------------------- 243 (373)
T 2x4f_A 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----------------------------------------------- 243 (373)
T ss_dssp CCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-----------------------------------------------
T ss_pred ccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-----------------------------------------------
Confidence 9999999999 466789999999885432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 244 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 279 (373)
T 2x4f_A 244 --------------------------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY 279 (373)
T ss_dssp --------------------------------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHH
Confidence 000146899999999998888999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC--CC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
||++ ||....... ....+.... .+ ..+....+...+||.+||..||.+|||+.|+|+||||...
T Consensus 280 elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 280 MLLSGLSPFLGDNDAE-TLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHSSCTTCCSSHHH-HHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 9999 666554432 333332222 22 2223344556699999999999999999999999999875
No 67
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97 E-value=1.2e-31 Score=301.00 Aligned_cols=204 Identities=20% Similarity=0.225 Sum_probs=159.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++.++..|++||+.||.|||++||+|
T Consensus 75 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH 149 (484)
T 3nyv_A 75 REVQLLKQLDHPNIMKLYE-FFED---KGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVH 149 (484)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEe---CCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5566889999999999888 5533 3456777776 6999999995544 4999999999999999999999999999
Q ss_pred ccCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||++ +.++.+||+|||++.......
T Consensus 150 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 183 (484)
T 3nyv_A 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---------------------------------------------- 183 (484)
T ss_dssp SCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----------------------------------------------
T ss_pred CCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----------------------------------------------
Confidence 9999999999 467889999999884332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||++|+|||++.+ .|+.++|||||||++
T Consensus 184 ---------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 217 (484)
T 3nyv_A 184 ---------------------------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL 217 (484)
T ss_dssp ---------------------------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCccccCceeecC-CCCCcceeHHHHHHH
Confidence 0011468999999999976 699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||...... ..+..+....+. +.+....+...+||.+||..+|.+|||+.++|+||||+..
T Consensus 218 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 218 YILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 99999 66554433 344444443322 2233344556699999999999999999999999999754
No 68
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97 E-value=5.3e-32 Score=298.17 Aligned_cols=205 Identities=21% Similarity=0.235 Sum_probs=152.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.. ..+++++|+ .|++|.+++.... .+++.+++.|+.||+.||+|||++||+|
T Consensus 189 ~E~~~l~~l~hpniv~l~~-~~~~----~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH 262 (419)
T 3i6u_A 189 TEIEILKKLNHPCIIKIKN-FFDA----EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENGIIH 262 (419)
T ss_dssp HHHHHHHHCCCTTBCCCCE-EEES----SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec----CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5667889999999999888 5532 235677777 5899999985544 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+|||++..+ .+||+|||+++..+....
T Consensus 263 rDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~--------------------------------------------- 297 (419)
T 3i6u_A 263 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL--------------------------------------------- 297 (419)
T ss_dssp SCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------------------------------------------
T ss_pred cCCChHhEEEecCCCcceEEEeecccceecCCCcc---------------------------------------------
Confidence 99999999997554 499999999854322100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLG 259 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlG 259 (712)
....+||+.|+|||++.+ ..++.++||||||
T Consensus 298 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG 331 (419)
T 3i6u_A 298 ----------------------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 331 (419)
T ss_dssp -----------------------------------------------------CTTCCTTTTC----CTTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCCCccCceeeecCCCCCCCchhhhHhHH
Confidence 011468999999999864 5588999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCC--Cchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++|+|++ ||............+..... ++.. ....+...+||.+||+.||.+|||+.++|+||||+..
T Consensus 332 ~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 332 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred HHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 99999999 66543332222333333222 2222 3334555699999999999999999999999999864
No 69
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.97 E-value=1.2e-31 Score=296.20 Aligned_cols=199 Identities=16% Similarity=0.213 Sum_probs=149.6
Q ss_pred CCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCce
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NI 113 (712)
.+|+||+.+++ ++. ....+++++|+.+++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 156 ~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NI 231 (429)
T 3kvw_A 156 DNTMNVIHMLE-NFT---FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENI 231 (429)
T ss_dssp TSCSCBCCEEE-EEE---ETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGE
T ss_pred cCCcCEEEEEe-ecc---cCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 47889999887 442 23578999999989999999443 34589999999999999999999999999999999999
Q ss_pred eecCCCc--EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 114 VMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 114 ll~~~~~--vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
|++.++. +||+|||++...+..
T Consensus 232 Ll~~~~~~~vkL~DFG~a~~~~~~-------------------------------------------------------- 255 (429)
T 3kvw_A 232 LLKQQGRSGIKVIDFGSSCYEHQR-------------------------------------------------------- 255 (429)
T ss_dssp EESSTTSCCEEECCCTTCEETTCC--------------------------------------------------------
T ss_pred EEccCCCcceEEeecccceecCCc--------------------------------------------------------
Confidence 9998887 999999987332111
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---C
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---p 268 (712)
....+||+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 256 -------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~p 298 (429)
T 3kvw_A 256 -------------------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298 (429)
T ss_dssp -------------------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred -------------------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCC
Confidence 001468999999999999999999999999999999999 5
Q ss_pred CCCChhhHHHHHhhcc-cCCCchh-------------------------------------------------------h
Q 005147 269 FSTGEEKTRTMSSLRH-RVLPPQL-------------------------------------------------------L 292 (712)
Q Consensus 269 f~~~~~~~~~~~~~~~-~~~~~~~-------------------------------------------------------~ 292 (712)
|............+.. +..+..+ .
T Consensus 299 f~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 378 (429)
T 3kvw_A 299 LPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378 (429)
T ss_dssp SCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTT
T ss_pred CCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhcc
Confidence 5544332222111110 0000000 0
Q ss_pred -hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 293 -LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 293 -~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
...+...+||.+||..||++|||+.|+|+||||+....
T Consensus 379 ~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417 (429)
T ss_dssp TCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred ccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCC
Confidence 01234559999999999999999999999999997643
No 70
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=8.8e-32 Score=290.42 Aligned_cols=216 Identities=15% Similarity=0.199 Sum_probs=159.6
Q ss_pred ccceeeccCCCCCcccccccccccc-cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+++++.+.... .....+++++|+.+++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 78 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 157 (362)
T 3pg1_A 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157 (362)
T ss_dssp HHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEe
Confidence 5666788899999999988433222 334478999999889999999766667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.......
T Consensus 158 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 188 (362)
T 3pg1_A 158 RDLHPGNILLADNNDITICDFNLAREDTADA------------------------------------------------- 188 (362)
T ss_dssp CCCCGGGEEECTTCCEEECCTTC---------------------------------------------------------
T ss_pred cCCChHHEEEcCCCCEEEEecCccccccccc-------------------------------------------------
Confidence 9999999999999999999999884321110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
......|+++|+|||++.+ ..++.++|||||||++|+
T Consensus 189 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 226 (362)
T 3pg1_A 189 ------------------------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAE 226 (362)
T ss_dssp -------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHH
Confidence 0011467999999999977 569999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccC-------------------------CCc-----hhhhcCchhHHHHHHcCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRV-------------------------LPP-----QLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~-------------------------~~~-----~~~~~~~~~~~li~~~L~~dP~ 311 (712)
|++ ||................. .+. ......+...+||.+||..||.
T Consensus 227 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 306 (362)
T 3pg1_A 227 MFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ 306 (362)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGG
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChh
Confidence 998 6655433222111111000 000 0111234456999999999999
Q ss_pred CCCCHHHHhcCcCCCCCcCchH
Q 005147 312 GRPKMGELLQSEFLNEPRDSME 333 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~~~~~ 333 (712)
+|||+.++|+||||+....+..
T Consensus 307 ~Rpt~~ell~hp~f~~~~~~~~ 328 (362)
T 3pg1_A 307 RRISTEQALRHPYFESLFDPLD 328 (362)
T ss_dssp GSCCHHHHHTSGGGTTTCCGGG
T ss_pred hCCCHHHHHcCchhhhccCccc
Confidence 9999999999999998765443
No 71
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=3e-32 Score=294.16 Aligned_cols=207 Identities=15% Similarity=0.164 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++. ....+++++|+. |++|.+++...+ .+++.+++.|++||+.||.|||++||+|
T Consensus 65 ~E~~~l~~l~hpniv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~ivH 139 (361)
T 3uc3_A 65 REIINHRSLRHPNIVRFKE-VIL---TPTHLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQICH 139 (361)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHhCCCCCCCcEEE-EEe---eCCEEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5556788899999999888 543 234577888875 899999995443 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCc--EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 106 HNVRPSCFVMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 106 rDLkP~NIll~~~~~--vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||+||+++.++. +||+|||+++......
T Consensus 140 ~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 172 (361)
T 3uc3_A 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS----------------------------------------------- 172 (361)
T ss_dssp CCCCGGGEEECSSSSCCEEECCCCCC------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCceEEEeecCccccccccC-----------------------------------------------
Confidence 999999999987665 9999999874211000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCc-cchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-SDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~-sDIwSlGvll 262 (712)
......||++|+|||++.+..++.+ +|||||||++
T Consensus 173 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 208 (361)
T 3uc3_A 173 --------------------------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTL 208 (361)
T ss_dssp ----------------------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHH
Confidence 0011468999999999988887655 9999999999
Q ss_pred HHhhC---CCCCChhh---HHHHHhhcccCC-CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEK---TRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|+|++ ||...... ...+..+..... .+......+...+||.+||..||.+|||+.|+++||||....
T Consensus 209 ~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 209 YVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp HHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred HHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 99998 66543221 222222222221 122223345666999999999999999999999999996543
No 72
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97 E-value=2.5e-31 Score=298.64 Aligned_cols=206 Identities=18% Similarity=0.216 Sum_probs=159.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++.+++.|++||+.||.|||++||+|
T Consensus 70 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH 144 (486)
T 3mwu_A 70 REVELLKKLDHPNIMKLFE-ILED---SSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVH 144 (486)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCcCeEEE-EEEc---CCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4566788999999999888 5533 3457777777 5899999885443 4999999999999999999999999999
Q ss_pred ccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++ .++.+||+|||++.......
T Consensus 145 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 178 (486)
T 3mwu_A 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---------------------------------------------- 178 (486)
T ss_dssp SCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-----------------------------------------------
T ss_pred ccCchHHEEEecCCCCCCEEEEECCcCeECCCCC----------------------------------------------
Confidence 99999999995 45579999999884332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||++|+|||++.+ .|+.++|||||||++
T Consensus 179 ---------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 212 (486)
T 3mwu_A 179 ---------------------------------------------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVIL 212 (486)
T ss_dssp ------------------------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHH
Confidence 0011468999999999976 499999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+|++ ||...... .....+....++ +.+....+...+||.+||..||.+|||+.++|+||||+....
T Consensus 213 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~ 285 (486)
T 3mwu_A 213 YILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285 (486)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence 99998 66554433 334444433322 233334556669999999999999999999999999986543
No 73
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=7.6e-32 Score=294.57 Aligned_cols=213 Identities=17% Similarity=0.179 Sum_probs=158.6
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+++.++||||+++++.++.... ....+++++|+.+++|.+.+. .....+++..++.|+.||+.||+|||++
T Consensus 81 ~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 160 (394)
T 4e7w_A 81 RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160 (394)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 56678899999999999884443222 222477899998777766552 2344599999999999999999999999
Q ss_pred CceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||+|||++ .++.+||+|||+++......
T Consensus 161 ~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~-------------------------------------------- 196 (394)
T 4e7w_A 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE-------------------------------------------- 196 (394)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC--------------------------------------------
T ss_pred CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC--------------------------------------------
Confidence 999999999999999 78999999999885431110
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlG 259 (712)
......||++|+|||++.+.. |+.++||||||
T Consensus 197 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 229 (394)
T 4e7w_A 197 -----------------------------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTG 229 (394)
T ss_dssp -----------------------------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred -----------------------------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHH
Confidence 001146799999999997764 99999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcc------------------cCCC----ch----hh-hcCchhHHHHHHcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLP----PQ----LL-LKFPKEASFCLWLLHPE 309 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~------------------~~~~----~~----~~-~~~~~~~~li~~~L~~d 309 (712)
|++|||++ ||............+.. ..++ .. +. ...+...+||.+||..|
T Consensus 230 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (394)
T 4e7w_A 230 CVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYT 309 (394)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCC
Confidence 99999999 66654433222221111 0011 00 11 12345569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|.+|||+.|+|+||||+....
T Consensus 310 P~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 310 PSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp GGGSCCHHHHHTSGGGSTTTS
T ss_pred hhhCCCHHHHhcChhhhhhcc
Confidence 999999999999999998654
No 74
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.4e-32 Score=292.85 Aligned_cols=211 Identities=18% Similarity=0.266 Sum_probs=156.5
Q ss_pred ccceeeccCCC--CCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDH--LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H--~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+.| |||+.+++ ++. ....++++||+.+++|.+++.... .+++.++..|+.||+.||.|||++||+
T Consensus 56 ~E~~~l~~l~~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ii 130 (343)
T 3dbq_A 56 NEIAYLNKLQQHSDKIIRLYD-YEI---TDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIV 130 (343)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEE---CSSEEEEEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhhhhcCCceEEEee-eEe---eCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 35556777766 99999888 443 345788999999999999995543 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++ ++.+||+|||++.........
T Consensus 131 HrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 163 (343)
T 3dbq_A 131 HSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS---------------------------------------------- 163 (343)
T ss_dssp CCCCCGGGEEEE-TTEEEECCCSSSCCC----------------------------------------------------
T ss_pred cCCCCcceEEEE-CCcEEEeecccccccCccccc----------------------------------------------
Confidence 999999999996 688999999998543221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----------CCCCCcc
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSCAS 253 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----------~~~~~~s 253 (712)
......+||++|+|||++.+ ..++.++
T Consensus 164 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 201 (343)
T 3dbq_A 164 ------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201 (343)
T ss_dssp ------------------------------------------------CCCCSSCCHHHHHHCC-----------CCHHH
T ss_pred ------------------------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchh
Confidence 00011468999999999864 5689999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|||||||++|||++ ||.........+..+........++... +...+|+.+||..||.+|||+.++|+||||+...
T Consensus 202 DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred hHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 99999999999998 6654333333333333322222222233 3456999999999999999999999999998765
Q ss_pred Cc
Q 005147 330 DS 331 (712)
Q Consensus 330 ~~ 331 (712)
.+
T Consensus 282 ~~ 283 (343)
T 3dbq_A 282 HP 283 (343)
T ss_dssp C-
T ss_pred Cc
Confidence 43
No 75
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=5.8e-32 Score=294.36 Aligned_cols=212 Identities=17% Similarity=0.183 Sum_probs=158.4
Q ss_pred ccceeeccCCCCCcccccccccccc----------------------------------cccCceEEEEeeCCccHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE----------------------------------AAIDPFVHAIEWGDVSLRQWL 72 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~----------------------------------~~~~~~~l~~e~~g~sL~~~l 72 (712)
++..+++.++||||+++++.++... .....++++||+.+++|.+.+
T Consensus 49 ~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l 128 (383)
T 3eb0_A 49 RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128 (383)
T ss_dssp HHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHHH
T ss_pred HHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHH
Confidence 5667889999999999988443221 223347899999888988877
Q ss_pred c---CCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccc
Q 005147 73 D---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMET 148 (712)
Q Consensus 73 ~---~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~ 148 (712)
. ..+..+++..++.|+.||+.||.|||++||+||||||+||+++ .++.+||+|||+++......
T Consensus 129 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~------------ 196 (383)
T 3eb0_A 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE------------ 196 (383)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS------------
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC------------
Confidence 3 2345699999999999999999999999999999999999997 67899999999885432110
Q ss_pred cCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCccc
Q 005147 149 KDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK 228 (712)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 228 (712)
.
T Consensus 197 -------------------------------------------------------------------------------~ 197 (383)
T 3eb0_A 197 -------------------------------------------------------------------------------P 197 (383)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred ccccccCccccCcccccCCC-CCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccC------------------
Q 005147 229 QILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV------------------ 286 (712)
Q Consensus 229 ~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~------------------ 286 (712)
.....||++|+|||.+.+.. ++.++|||||||++|||++ ||............+....
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 277 (383)
T 3eb0_A 198 SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVR 277 (383)
T ss_dssp CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CC
T ss_pred CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccccccc
Confidence 01146799999999998765 9999999999999999998 6655443332222221100
Q ss_pred CC----ch----hhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 287 LP----PQ----LLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 287 ~~----~~----~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+| .. +.. ..+...+||.+||..||.+|||+.|+|+||||+...
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 278 FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR 329 (383)
T ss_dssp CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred CCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence 00 00 111 223455999999999999999999999999998653
No 76
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.97 E-value=1e-31 Score=290.30 Aligned_cols=216 Identities=15% Similarity=0.150 Sum_probs=161.0
Q ss_pred ccceeeccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+.||||+++++ ++... .....+++++++.+++|.+++... .+++.+++.|+.||+.||.|||++||+
T Consensus 74 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~iv 150 (364)
T 3qyz_A 74 REIKILLRFRHENIIGIND-IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVL 150 (364)
T ss_dssp HHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCCcccee-EEecCCccccceEEEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666788899999999888 44332 223468999999989999999543 389999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+||+|||++.........
T Consensus 151 H~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 184 (364)
T 3qyz_A 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH---------------------------------------------- 184 (364)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB----------------------------------------------
T ss_pred cCCCChHhEEECCCCCEEEEeCcceEecCCCCCc----------------------------------------------
Confidence 9999999999999999999999988543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~ 263 (712)
........||++|+|||++.+.. ++.++|||||||++|
T Consensus 185 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 223 (364)
T 3qyz_A 185 -----------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA 223 (364)
T ss_dssp -----------------------------------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHH
Confidence 00001147899999999876544 899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCc-----------------------------hhhhcCchhHHHHHHcCCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPP-----------------------------QLLLKFPKEASFCLWLLHPEPS 311 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~li~~~L~~dP~ 311 (712)
+|++ ||..................|. ......+...+||.+||..||.
T Consensus 224 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 303 (364)
T 3qyz_A 224 EMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH 303 (364)
T ss_dssp HHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTT
T ss_pred HHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChh
Confidence 9998 6654433222111111000000 0112234556999999999999
Q ss_pred CCCCHHHHhcCcCCCCCcCch
Q 005147 312 GRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 312 ~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
+|||+.|+|+||||+....+.
T Consensus 304 ~R~t~~e~l~hp~~~~~~~~~ 324 (364)
T 3qyz_A 304 KRIEVEQALAHPYLEQYYDPS 324 (364)
T ss_dssp TSCCHHHHHTSGGGTTTCCGG
T ss_pred hCCCHHHHhcCcchhhccCcc
Confidence 999999999999999875543
No 77
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=6.7e-32 Score=297.48 Aligned_cols=213 Identities=16% Similarity=0.202 Sum_probs=157.7
Q ss_pred ccceeeccCCCCCccccccccccccc--ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~--~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..+|+.++||||+++++.++.... ....+++++|+.+++|.+.+. .....+++..++.|+.||+.||.|||++
T Consensus 96 ~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 175 (420)
T 1j1b_A 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175 (420)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 56678999999999999884443222 222467899998888887663 2345599999999999999999999999
Q ss_pred CceeccCCCCceeecCC-CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
||+||||||+|||++.+ +.+||+|||+++......
T Consensus 176 ~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 211 (420)
T 1j1b_A 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-------------------------------------------- 211 (420)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC--------------------------------------------
T ss_pred CccccCCChhhEEEeCCCCeEEeccchhhhhcccCC--------------------------------------------
Confidence 99999999999999955 568999999885431110
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (712)
.....+||++|+|||++.+. .|+.++||||||
T Consensus 212 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 244 (420)
T 1j1b_A 212 -----------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 244 (420)
T ss_dssp -----------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHH
T ss_pred -----------------------------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHH
Confidence 00114689999999999775 699999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcc------------------cCCCc----h----h-hhcCchhHHHHHHcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPP----Q----L-LLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~------------------~~~~~----~----~-~~~~~~~~~li~~~L~~d 309 (712)
|++|||++ ||............+.. ..+|. . + ....+...+||.+||..|
T Consensus 245 ~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~d 324 (420)
T 1j1b_A 245 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 324 (420)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSS
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCC
Confidence 99999999 66554433222221110 00110 0 0 112345569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCcC
Q 005147 310 PSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|.+|||+.|+|+||||.....
T Consensus 325 P~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 325 PTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp GGGSCCHHHHHTSGGGGGGGC
T ss_pred hhHCCCHHHHhCCHhhccccc
Confidence 999999999999999986544
No 78
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97 E-value=5.2e-32 Score=290.12 Aligned_cols=202 Identities=18% Similarity=0.239 Sum_probs=157.0
Q ss_pred eecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
+|.. .+||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+||||
T Consensus 70 il~~~~~hp~iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDl 144 (345)
T 1xjd_A 70 VLSLAWEHPFLTHMFC-TFQT---KENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDL 144 (345)
T ss_dssp HHHHHTTCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred HHHhcCCCCCCCcEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence 4444 49999999888 5532 3457788887 5899999995543 4999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.+|.+||+|||+++.......
T Consensus 145 kp~NIll~~~g~vkL~DFG~a~~~~~~~~--------------------------------------------------- 173 (345)
T 1xjd_A 145 KLDNILLDKDGHIKIADFGMCKENMLGDA--------------------------------------------------- 173 (345)
T ss_dssp CGGGEEECTTSCEEECCCTTCBCCCCTTC---------------------------------------------------
T ss_pred ChhhEEECCCCCEEEeEChhhhhcccCCC---------------------------------------------------
Confidence 99999999999999999998853211100
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 174 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g 214 (345)
T 1xjd_A 174 ---------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214 (345)
T ss_dssp ---------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcC
Confidence 0011578999999999999999999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHH-HHhcCcCCCCCc
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-eiL~hp~~~~~~ 329 (712)
||...... .....+..... .......+...+||.+||..||.+||++. ++++||||+...
T Consensus 215 ~~Pf~~~~~~-~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~ 277 (345)
T 1xjd_A 215 QSPFHGQDEE-ELFHSIRMDNP-FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277 (345)
T ss_dssp SCSSCCSSHH-HHHHHHHHCCC-CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred CCCCCCCCHH-HHHHHHHhCCC-CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence 66554433 33333333221 11112334556999999999999999998 999999998764
No 79
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.97 E-value=4.5e-32 Score=295.91 Aligned_cols=210 Identities=18% Similarity=0.261 Sum_probs=155.1
Q ss_pred ccceeeccCC--CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~--H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+. ||||+++++ ++. ....++++||+.+++|.+++.... .+++.+++.|++||+.||.|||++||+
T Consensus 103 ~Ei~~l~~l~~~~~~iv~~~~-~~~---~~~~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~iv 177 (390)
T 2zmd_A 103 NEIAYLNKLQQHSDKIIRLYD-YEI---TDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIV 177 (390)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEE---CSSEEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHcccCCCeEEEEEE-EEe---cCCEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3445666665 599999887 442 234588999999999999995544 589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++ ++.+||+|||+++........
T Consensus 178 HrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 210 (390)
T 2zmd_A 178 HSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS---------------------------------------------- 210 (390)
T ss_dssp CCCCCGGGEEES-SSCEEECCCSSSCCC----------------------------------------------------
T ss_pred ecCCCHHHEEEE-CCeEEEEecCccccccCCCcc----------------------------------------------
Confidence 999999999995 689999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----------CCCCCcc
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSCAS 253 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----------~~~~~~s 253 (712)
......+||+.|+|||++.+ ..++.++
T Consensus 211 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 248 (390)
T 2zmd_A 211 ------------------------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS 248 (390)
T ss_dssp ---------------------------------------------CCSCCCGGGCCHHHHHCC------------CCHHH
T ss_pred ------------------------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCChh
Confidence 00011468999999999865 3589999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|||||||++|||++ ||.........+..+........+... .+...+||.+||..||.+|||+.++|+||||+...
T Consensus 249 DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred hHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 99999999999999 665443333333333332222222222 23456999999999999999999999999998664
Q ss_pred C
Q 005147 330 D 330 (712)
Q Consensus 330 ~ 330 (712)
.
T Consensus 329 ~ 329 (390)
T 2zmd_A 329 H 329 (390)
T ss_dssp -
T ss_pred c
Confidence 4
No 80
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97 E-value=6.2e-32 Score=294.73 Aligned_cols=217 Identities=17% Similarity=0.111 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .|++|.+++.. ....+++.+++.|+.||+.||+|||++||+
T Consensus 75 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 150 (389)
T 3gni_B 75 GELHVSKLFNHPNIVPYRA-TFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV 150 (389)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCCCCCcEeE-EEEE---CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3566788899999999888 5432 3457777777 58999999943 234599999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+|++|||.+...... |....
T Consensus 151 HrDlkp~NIll~~~~~~kl~dfg~~~~~~~~------------------------------------~~~~~-------- 186 (389)
T 3gni_B 151 HRSVKASHILISVDGKVYLSGLRSNLSMISH------------------------------------GQRQR-------- 186 (389)
T ss_dssp CCCCSGGGEEECTTCCEEECCGGGCEECEET------------------------------------TEECS--------
T ss_pred cCCCCHHHEEEcCCCCEEEcccccceeeccc------------------------------------ccccc--------
Confidence 9999999999999999999999987432110 00000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--CCCCCccchHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLL 262 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvll 262 (712)
..........||+.|+|||++.+ ..++.++|||||||++
T Consensus 187 ---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 227 (389)
T 3gni_B 187 ---------------------------------------VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 227 (389)
T ss_dssp ---------------------------------------CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHH
Confidence 00000011468999999999987 5699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC-------------------------------------------C-chhhhcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL-------------------------------------------P-PQLLLKF 295 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~-------------------------------------------~-~~~~~~~ 295 (712)
|||++ ||............+..... . +......
T Consensus 228 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 307 (389)
T 3gni_B 228 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS 307 (389)
T ss_dssp HHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------------CC
T ss_pred HHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccC
Confidence 99998 66543333222222111100 0 0011123
Q ss_pred chhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 296 PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+...+||.+||+.||++|||+.|+|+||||+....
T Consensus 308 ~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 308 PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 44558999999999999999999999999987643
No 81
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=4.6e-32 Score=296.90 Aligned_cols=207 Identities=15% Similarity=0.174 Sum_probs=160.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+++.++||||+++++ ++.+ ...++++||+. |++|.+++... .+++..++.|+.||+.||+|||++||+||
T Consensus 119 E~~il~~l~hp~Iv~l~~-~~~~---~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHr 192 (410)
T 3v8s_A 119 ERDIMAFANSPWVVQLFY-AFQD---DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHR 192 (410)
T ss_dssp HHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhCCCCCCCeEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 445788899999999888 5532 34678888885 99999999543 38999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.+|.+||+|||+++........
T Consensus 193 DLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~------------------------------------------------ 224 (410)
T 3v8s_A 193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV------------------------------------------------ 224 (410)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSEE------------------------------------------------
T ss_pred cCCHHHeeECCCCCEEEeccceeEeeccCCcc------------------------------------------------
Confidence 99999999999999999999998543221000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC----CCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+.. |+.++|||||||++
T Consensus 225 -----------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvil 263 (410)
T 3v8s_A 225 -----------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 263 (410)
T ss_dssp -----------------------------------------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHH
Confidence 001157899999999998765 88999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhccc---CCCchhhhcCchhHHHHHHcCCCCCCC--CCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++ ||...... .....+... ...+......+...+||.+||..+|.+ ||+++||++||||+....
T Consensus 264 yell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w 338 (410)
T 3v8s_A 264 YEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW 338 (410)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSC
T ss_pred HHHHhCCCCCCCCChh-hHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCH
Confidence 99998 77654433 333333221 111222233455669999999999988 999999999999998643
No 82
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=2.2e-31 Score=282.50 Aligned_cols=207 Identities=18% Similarity=0.249 Sum_probs=161.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++.+ ...+++++|+. |++|.+++... ..+++.+++.++.||+.||.|||++||+|
T Consensus 64 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~ivH 138 (321)
T 2a2a_A 64 REVSILRQVLHHNVITLHD-VYEN---RTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKIAH 138 (321)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCcceEEE-EEec---CCEEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4556788899999999888 5532 34577788875 89999999654 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++.++ .++++|||++.......
T Consensus 139 ~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 173 (321)
T 2a2a_A 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--------------------------------------------- 173 (321)
T ss_dssp CCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CCCChHHEEEecCCCCcCCEEEccCccceecCccc---------------------------------------------
Confidence 99999999999887 79999999884332110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||.+.+..++.++|||||||+
T Consensus 174 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 207 (321)
T 2a2a_A 174 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207 (321)
T ss_dssp ----------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCCCCCccCcccccCCCCCCccccHHHHHH
Confidence 0001468999999999999999999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccC--CCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|+|++ ||...... .....+.... .++..... .+...+||.+||..||.+|||+.++|+||||+....
T Consensus 208 l~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~ 281 (321)
T 2a2a_A 208 TYILLSGASPFLGDTKQ-ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDN 281 (321)
T ss_dssp HHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSH
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCCc
Confidence 999998 66554333 3333333322 23333333 344559999999999999999999999999987643
No 83
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=2.5e-31 Score=288.09 Aligned_cols=209 Identities=16% Similarity=0.247 Sum_probs=158.9
Q ss_pred ccceeeccCCCCCccccccccccccccc---CceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~---~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+++++ ++...... ..+++++++.+++|.+++.. .+++.++..|+.||+.||+|||++||
T Consensus 90 ~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~i 165 (371)
T 4exu_A 90 RELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGV 165 (371)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCchhhhh-heeccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5666788899999999998 55433222 24589999988999998833 38999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||++...+..
T Consensus 166 vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~------------------------------------------------ 197 (371)
T 4exu_A 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------------------------------------ 197 (371)
T ss_dssp CCSCCCGGGEEECTTCCEEECSTTCC------------------------------------------------------
T ss_pred cCCCcCHHHeEECCCCCEEEEecCcccccccC------------------------------------------------
Confidence 99999999999999999999999988432111
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
.....||++|+|||++.+ ..++.++|||||||++
T Consensus 198 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (371)
T 4exu_A 198 ---------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 232 (371)
T ss_dssp -----------------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHH
Confidence 001467999999999987 5699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC-c----------------------------hhhhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP-P----------------------------QLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~-~----------------------------~~~~~~~~~~~li~~~L~~dP 310 (712)
|+|++ ||............+.....+ . ......+...+||.+||..||
T Consensus 233 ~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 312 (371)
T 4exu_A 233 AEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV 312 (371)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCT
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCCh
Confidence 99998 665544332222211111010 0 011224456699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCch
Q 005147 311 SGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
.+|||+.|+|+||||+....+.
T Consensus 313 ~~Rpt~~ell~hp~f~~~~~~~ 334 (371)
T 4exu_A 313 DKRLTAAQALTHPFFEPFRDPE 334 (371)
T ss_dssp TTSCCHHHHHTSGGGTTTCCGG
T ss_pred hhcCCHHHHhcCcccccCCCcc
Confidence 9999999999999999775543
No 84
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.97 E-value=9.7e-32 Score=288.27 Aligned_cols=206 Identities=17% Similarity=0.248 Sum_probs=155.8
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..++..+ +||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+|
T Consensus 59 E~~~l~~~~~hp~iv~l~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivH 133 (345)
T 3a8x_A 59 EKHVFEQASNHPFLVGLHS-CFQT---ESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIY 133 (345)
T ss_dssp HHHHHHHTTTCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHhcCCCCccCeEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 34455555 8999999888 5532 3467788887 5899999995443 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++...... +
T Consensus 134 rDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------------------------~--------------- 165 (345)
T 3a8x_A 134 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D--------------- 165 (345)
T ss_dssp CCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------------------------C---------------
T ss_pred cCCCHHHEEECCCCCEEEEeccccccccCCC---------------------------------C---------------
Confidence 9999999999999999999999885321110 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 166 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 203 (345)
T 3a8x_A 166 ------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203 (345)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHH
Confidence 00115789999999999999999999999999999999
Q ss_pred hC---CCCCC--------hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH------HHHhcCcCCCCC
Q 005147 266 FC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~eiL~hp~~~~~ 328 (712)
++ ||... .........+..... .......+...+||.+||..||.+||++ .++++||||+..
T Consensus 204 l~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 204 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp HHSSCTTTTTTC-------CHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred HhCCCCcCCcccccccccccHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 98 66431 111122222222211 1112234556699999999999999985 899999999875
Q ss_pred c
Q 005147 329 R 329 (712)
Q Consensus 329 ~ 329 (712)
.
T Consensus 283 ~ 283 (345)
T 3a8x_A 283 D 283 (345)
T ss_dssp C
T ss_pred C
Confidence 3
No 85
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.97 E-value=5.5e-32 Score=282.28 Aligned_cols=203 Identities=18% Similarity=0.182 Sum_probs=151.3
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc-Cceec
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 106 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHr 106 (712)
.++.++||||+++++ ++. ....+++++|+.+++|.+++.. ....+++.+++.|+.||+.||+|||++ ||+||
T Consensus 59 ~~~~~~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~ 134 (290)
T 3fme_A 59 SMRTVDCPFTVTFYG-ALF---REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134 (290)
T ss_dssp HHTTCCCTTBCCEEE-EEE---CSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHhCCCCeEEEEee-eee---ccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 477899999999888 443 2356889999988899888732 445699999999999999999999998 99999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++.......
T Consensus 135 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------------- 164 (290)
T 3fme_A 135 DVKPSNVLINALGQVKMCDFGISGYLVDDV-------------------------------------------------- 164 (290)
T ss_dssp CCSGGGCEECTTCCEEBCCC------------------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEeecCCcccccccc--------------------------------------------------
Confidence 999999999999999999999884332110
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc----cCCCCCCccchHHHHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+ .+..++.++|||||||++
T Consensus 165 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 203 (290)
T 3fme_A 165 -----------------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 203 (290)
T ss_dssp ----------------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHH
Confidence 00013579999999996 455689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||..................+..... ..+...+|+.+||..||.+|||+.++++||||+..
T Consensus 204 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 204 IELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp HHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 99998 66653333333333333333332222 33455699999999999999999999999999854
No 86
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97 E-value=1.7e-31 Score=287.03 Aligned_cols=205 Identities=17% Similarity=0.229 Sum_probs=157.9
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|..+ .||||+.+++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.|+.||+.||+|||++||+|
T Consensus 70 E~~~l~~~~~hp~iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givH 144 (353)
T 2i0e_A 70 EKRVLALPGKPPFLTQLHS-CFQT---MDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIY 144 (353)
T ss_dssp HHHHHTCTTCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHhcCCCCEEeeEEE-EEEc---CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 33456655 8999999887 4432 3467788887 5899999995543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.+|.+||+|||+++.......
T Consensus 145 rDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~------------------------------------------------ 176 (353)
T 2i0e_A 145 RDLKLDNVMLDSEGHIKIADFGMCKENIWDGV------------------------------------------------ 176 (353)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCBCCCCTTC------------------------------------------------
T ss_pred ccCCHHHEEEcCCCcEEEEeCCcccccccCCc------------------------------------------------
Confidence 99999999999999999999998853211100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 177 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 214 (353)
T 2i0e_A 177 ------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 214 (353)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCccccChhhhcCCCcCCcccccchHHHHHHH
Confidence 00115789999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... ......+...+||.+||..||.+||+ +.++++||||+...
T Consensus 215 l~G~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~ 284 (353)
T 2i0e_A 215 LAGQAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 284 (353)
T ss_dssp HHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred HcCCCCCCCCCHH-HHHHHHHhCCCC-CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCC
Confidence 98 66654433 333333332211 11223455669999999999999994 69999999998753
No 87
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=9.8e-32 Score=291.31 Aligned_cols=208 Identities=20% Similarity=0.270 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+++++ ++.... ....+++++|+.+++|.+++.. .+++.++..++.||+.||.|||++||
T Consensus 73 ~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~i 148 (371)
T 2xrw_A 73 RELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 148 (371)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECSCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCccceEE-eeccccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5666788899999999988 543332 2246899999988899999853 38999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||+++..+...
T Consensus 149 vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 181 (371)
T 2xrw_A 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 181 (371)
T ss_dssp CCSCCCGGGEEECTTSCEEECCCCC-------------------------------------------------------
T ss_pred ecccCCHHHEEEcCCCCEEEEEeeccccccccc-----------------------------------------------
Confidence 999999999999999999999999884322110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 182 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 217 (371)
T 2xrw_A 182 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217 (371)
T ss_dssp ----------------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHH
Confidence 001146899999999999989999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccC-CC-chhh---------------------------------------hcCchhH
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRV-LP-PQLL---------------------------------------LKFPKEA 299 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~-~~-~~~~---------------------------------------~~~~~~~ 299 (712)
+|++ ||........ +..+.... .| +.+. ...+...
T Consensus 218 el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
T 2xrw_A 218 EMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 296 (371)
T ss_dssp HHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHH
Confidence 9998 6665443322 22221111 00 0000 0012345
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+||.+||..||.+|||+.|+|+||||+....
T Consensus 297 ~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 327 (371)
T 2xrw_A 297 DLLSKMLVIDASKRISVDEALQHPYINVWYD 327 (371)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred HHHHHHCcCChhhCCCHHHHhCCcchhhhcC
Confidence 9999999999999999999999999987654
No 88
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=1.6e-31 Score=284.61 Aligned_cols=205 Identities=18% Similarity=0.224 Sum_probs=157.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. ...+++++|+ .|++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 70 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH 144 (327)
T 3a62_A 70 AERNILEEVKHPFIVDLIY-AFQT---GGKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKGIIY 144 (327)
T ss_dssp -HHHHHHHCCCTTBCCEEE-EEEC---SSCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCccceeE-EEEc---CCEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence 4556788899999999887 4432 3467777777 5899999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++...... .
T Consensus 145 ~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------~--------------- 176 (327)
T 3a62_A 145 RDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------------------------T--------------- 176 (327)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCC--------------------------------------------------------
T ss_pred ccCCHHHeEECCCCcEEEEeCCcccccccCC---------------------------------c---------------
Confidence 9999999999999999999999884321110 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||++.+..++.++|||||||++|+|
T Consensus 177 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 214 (327)
T 3a62_A 177 ------------------------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDM 214 (327)
T ss_dssp --------------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHH
Confidence 00114689999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~ 328 (712)
++ ||...... ..+..+...... ......+...+||.+||..||.+|| ++.++++||||+..
T Consensus 215 ~~g~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 215 LTGAPPFTGENRK-KTIDKILKCKLN-LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHSSCSCCCSSHH-HHHHHHHHTCCC-CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHCCCCCCCCCHH-HHHHHHHhCCCC-CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 98 66654433 233333222211 1112234556999999999999999 88999999999865
No 89
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97 E-value=2.3e-31 Score=295.71 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=158.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIv 104 (712)
++..+|..+.||||+.+++ ++.. ...++++||+ .|++|.+++.... .+++..++.|+.||+.||+|||+ +||+
T Consensus 197 ~e~~~l~~l~h~~iv~l~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~gii 271 (446)
T 4ejn_A 197 TENRVLQNSRHPFLTALKY-SFQT---HDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVV 271 (446)
T ss_dssp ----CCCCCSCTTSCCEEE-EEEE---TTEEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHhCCCCeEeeEEE-EEee---CCEEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 5566889999999999888 4432 3457788887 5889999995443 48999999999999999999998 9999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.++.+||+|||+++.......
T Consensus 272 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----------------------------------------------- 304 (446)
T 4ejn_A 272 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA----------------------------------------------- 304 (446)
T ss_dssp CCCCCGGGEEECSSSCEEECCCCCCCTTCC--------------------------------------------------
T ss_pred ECCCCHHHEEECCCCCEEEccCCCceeccCCCc-----------------------------------------------
Confidence 999999999999999999999998843211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 305 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 341 (446)
T 4ejn_A 305 -------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341 (446)
T ss_dssp ---------------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHH
Confidence 0011578999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||...... .....+...... ......+...+||.+||..||.+|| |+.++|+||||+...
T Consensus 342 ll~g~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~ 412 (446)
T 4ejn_A 342 MMCGRLPFYNQDHE-KLFELILMEEIR-FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 412 (446)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCC-CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred HhhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCC
Confidence 998 67654433 233332222211 1112345566999999999999999 999999999999763
No 90
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.97 E-value=3.3e-31 Score=286.91 Aligned_cols=202 Identities=17% Similarity=0.195 Sum_probs=157.2
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
+++.++||||+++++ ++.+ ...++++||+ .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+|||||
T Consensus 92 ll~~~~hp~Iv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlk 166 (373)
T 2r5t_A 92 LLKNVKHPFLVGLHF-SFQT---ADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLK 166 (373)
T ss_dssp CBCCCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhCCCCCCCCEEE-EEEe---CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 467899999999887 4432 3467777777 5899999995543 48999999999999999999999999999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+|||++.+|.+||+|||+++......
T Consensus 167 p~NIll~~~g~ikL~DFG~a~~~~~~~----------------------------------------------------- 193 (373)
T 2r5t_A 167 PENILLDSQGHIVLTDFGLCKENIEHN----------------------------------------------------- 193 (373)
T ss_dssp GGGEEECTTSCEEECCCCBCGGGBCCC-----------------------------------------------------
T ss_pred HHHEEECCCCCEEEeeCccccccccCC-----------------------------------------------------
Confidence 999999999999999999884311000
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC--
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~-- 267 (712)
......+||+.|+|||++.+..|+.++|||||||++|||++
T Consensus 194 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 236 (373)
T 2r5t_A 194 -------------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236 (373)
T ss_dssp -------------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCC
Confidence 00011578999999999999999999999999999999998
Q ss_pred -CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH----HHHhcCcCCCCCc
Q 005147 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEPR 329 (712)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~eiL~hp~~~~~~ 329 (712)
||...... ..+..+...... ......+...+||.+||..||.+||++ .++++||||+...
T Consensus 237 ~Pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~ 301 (373)
T 2r5t_A 237 PPFYSRNTA-EMYDNILNKPLQ-LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLIN 301 (373)
T ss_dssp CTTCCSBHH-HHHHHHHHSCCC-CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred CCCCCCCHH-HHHHHHHhcccC-CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence 66654433 333333332211 111233455699999999999999986 6999999998753
No 91
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=9.4e-32 Score=294.67 Aligned_cols=208 Identities=20% Similarity=0.261 Sum_probs=158.6
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
+..+|..++||||+++++ ++.+ ...++++||+ .|++|.++|.+.+..+++..++.|+.||+.||+|||++||+||
T Consensus 111 E~~il~~~~hp~Iv~l~~-~~~~---~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHr 186 (412)
T 2vd5_A 111 ERDVLVNGDRRWITQLHF-AFQD---ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186 (412)
T ss_dssp HHHHHHHSCTTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhcCCCCeeeEEE-EEee---CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 344677889999999888 5533 3467888887 4999999996554569999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+|||++.+|++||+|||+++.......
T Consensus 187 DLKp~NILld~~g~vkL~DFGla~~~~~~~~------------------------------------------------- 217 (412)
T 2vd5_A 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGT------------------------------------------------- 217 (412)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSC-------------------------------------------------
T ss_pred ccCHHHeeecCCCCEEEeechhheeccCCCc-------------------------------------------------
Confidence 9999999999999999999999854321100
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-------CCCCCCccchHHHH
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-------GAPVSCASDIYRLG 259 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-------~~~~~~~sDIwSlG 259 (712)
......+||+.|+|||++. +..|+.++||||||
T Consensus 218 ----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlG 257 (412)
T 2vd5_A 218 ----------------------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALG 257 (412)
T ss_dssp ----------------------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHH
T ss_pred ----------------------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHh
Confidence 0001157899999999997 35689999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcc----cCCCchhhhcCchhHHHHHHcCCCCCCCC---CCHHHHhcCcCCCCCc
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEPR 329 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~eiL~hp~~~~~~ 329 (712)
|++|||++ ||...... ..+..+.. ..+|.......+...+||.+||. +|.+| |+++++++||||+...
T Consensus 258 vilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~ 335 (412)
T 2vd5_A 258 VFAYEMFYGQTPFYADSTA-ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD 335 (412)
T ss_dssp HHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence 99999998 67654433 23333322 12232222334556699999999 99998 5999999999998764
Q ss_pred C
Q 005147 330 D 330 (712)
Q Consensus 330 ~ 330 (712)
.
T Consensus 336 w 336 (412)
T 2vd5_A 336 W 336 (412)
T ss_dssp S
T ss_pred H
Confidence 3
No 92
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=284.61 Aligned_cols=208 Identities=16% Similarity=0.234 Sum_probs=157.9
Q ss_pred ccceeeccCCCCCcccccccccccccc---cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~---~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++..... ...+++++++.+++|.+++.. .+++.++..++.||+.||.|||++||
T Consensus 72 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~i 147 (353)
T 3coi_A 72 RELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGV 147 (353)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCcccHhh-eEecccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 5666788999999999988 5543322 235789999988899998843 38999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||++...+..
T Consensus 148 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 179 (353)
T 3coi_A 148 VHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------------------------------------ 179 (353)
T ss_dssp CCSSCCGGGEEECTTCCEEECSTTCTTC----------------------------------------------------
T ss_pred ccCCCCHHHEeECCCCcEEEeecccccCCCCC------------------------------------------------
Confidence 99999999999999999999999988432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
.....|+++|+|||.+.+ ..++.++|||||||++
T Consensus 180 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il 214 (353)
T 3coi_A 180 ---------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 214 (353)
T ss_dssp -------------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHH
Confidence 001467999999999987 5689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc-c----------------------------CCCchhhhcCchhHHHHHHcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH-R----------------------------VLPPQLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~-~----------------------------~~~~~~~~~~~~~~~li~~~L~~dP 310 (712)
|+|++ ||............... + .++.......+...+||.+||..||
T Consensus 215 ~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp 294 (353)
T 3coi_A 215 AEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV 294 (353)
T ss_dssp HHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCT
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCc
Confidence 99998 66544322211111110 0 0011112234455699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcCc
Q 005147 311 SGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
.+|||+.++|+||||+....+
T Consensus 295 ~~Rpt~~e~l~hp~f~~~~~~ 315 (353)
T 3coi_A 295 DKRLTAAQALTHPFFEPFRDP 315 (353)
T ss_dssp TTSCCHHHHHTSGGGTTTCCG
T ss_pred ccCCCHHHHhcCcchhhccCc
Confidence 999999999999999987654
No 93
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.97 E-value=1.3e-31 Score=285.17 Aligned_cols=206 Identities=15% Similarity=0.220 Sum_probs=152.8
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+. ||||+.+++ ++.+. ....+++++++ .+++|.+++. .+++.+++.++.||+.||+|||++||+
T Consensus 79 ~E~~~l~~l~~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~iv 152 (330)
T 3nsz_A 79 REIKILENLRGGPNIITLAD-IVKDP-VSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMGIM 152 (330)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEECT-TTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHcCCCCCEEEeee-eeccC-CCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4555677775 999999888 55432 23456666666 6899999883 389999999999999999999999999
Q ss_pred eccCCCCceeecCCC-cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 105 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 105 HrDLkP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||||+||+++.++ .+||+|||++.......
T Consensus 153 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 185 (330)
T 3nsz_A 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------------------------------------- 185 (330)
T ss_dssp CCCCSGGGEEEETTTTEEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC-----------------------------------------------
Confidence 999999999999776 89999999884332110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||++.+ ..++.++|||||||++
T Consensus 186 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 221 (330)
T 3nsz_A 186 --------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 221 (330)
T ss_dssp --------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccccccChhhhcCCCcCCchhhHHHHHHHH
Confidence 0001467999999999987 5699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcc---------------cCCCch---------------------hhhcCchhHHHHH
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRH---------------RVLPPQ---------------------LLLKFPKEASFCL 303 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~---------------~~~~~~---------------------~~~~~~~~~~li~ 303 (712)
|+|++ ||.........+..+.. ...++. .....+...+||.
T Consensus 222 ~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 301 (330)
T 3nsz_A 222 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 301 (330)
T ss_dssp HHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHH
T ss_pred HHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHH
Confidence 99998 66543322222211110 000000 0112345569999
Q ss_pred HcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 304 WLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+||..||.+|||+.|+|+||||+...
T Consensus 302 ~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 302 KLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp TTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred HHhcCCcccCCCHHHHhcCccHhhhc
Confidence 99999999999999999999999764
No 94
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=284.18 Aligned_cols=201 Identities=23% Similarity=0.325 Sum_probs=156.0
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-C-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
.++..+|+.++||||+++++ ++. ....+++++++ . |.+|.+++.... .+++..++.|+.||+.||.|||++||
T Consensus 77 ~~E~~~l~~l~h~~Iv~~~~-~~~---~~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~i 151 (335)
T 3dls_A 77 TLEIAILSRVEHANIIKVLD-IFE---NQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLKDI 151 (335)
T ss_dssp EHHHHHHTTCCCTTBCCEEE-EEE---CSSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEe---eCCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34666888999999999888 553 23456777775 3 449999996554 49999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.+||+|||++.......
T Consensus 152 vH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~----------------------------------------------- 184 (335)
T 3dls_A 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK----------------------------------------------- 184 (335)
T ss_dssp ECSCCSGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred EEeccCHHHEEEcCCCcEEEeecccceECCCCC-----------------------------------------------
Confidence 999999999999999999999999884432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll 262 (712)
......||+.|+|||++.+..+ +.++|||||||++
T Consensus 185 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 220 (335)
T 3dls_A 185 --------------------------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220 (335)
T ss_dssp --------------------------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHH
T ss_pred --------------------------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHH
Confidence 0011468999999999988886 8899999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+|++ ||...... ......++ ....+...+||.+||..||.+|||+.++|+||||+....
T Consensus 221 ~el~~g~~pf~~~~~~------~~~~~~~~--~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 221 YTLVFEENPFCELEET------VEAAIHPP--YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp HHHHHSSCSCSSGGGG------TTTCCCCS--SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred HHHHhCCCchhhHHHH------HhhccCCC--cccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence 99998 55432211 11111111 112345569999999999999999999999999987543
No 95
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97 E-value=4.4e-31 Score=297.20 Aligned_cols=204 Identities=16% Similarity=0.216 Sum_probs=157.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ +|.+ ...+++++|+ .|++|.+++.... .+++.+++.|++||+.||.|||++||+|
T Consensus 85 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH 159 (494)
T 3lij_A 85 EEVAVLKLLDHPNIMKLYD-FFED---KRNYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHNIVH 159 (494)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEe---CCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 4566789999999999888 5533 3456777777 5889999884443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCC---CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~---~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+|||++.. +.+||+|||++.......
T Consensus 160 ~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~---------------------------------------------- 193 (494)
T 3lij_A 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---------------------------------------------- 193 (494)
T ss_dssp SCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----------------------------------------------
T ss_pred ccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----------------------------------------------
Confidence 9999999999764 459999999884331110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||++|+|||++. ..|+.++|||||||++
T Consensus 194 ---------------------------------------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il 227 (494)
T 3lij_A 194 ---------------------------------------------KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVIL 227 (494)
T ss_dssp ---------------------------------------------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHH
Confidence 001146899999999986 4699999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||...... .....+....++ +.+....+...+||.+||..||.+|||+.++|+||||+..
T Consensus 228 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 228 FILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 99998 66554433 333434333222 2233344556699999999999999999999999999764
No 96
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=2.1e-31 Score=297.00 Aligned_cols=205 Identities=17% Similarity=0.237 Sum_probs=160.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.. ...+++++|+. |++|.+++.+.+ .+++.+++.++.||+.||+|||++||+|
T Consensus 65 ~Ei~~l~~l~HpnIv~l~~-~~~~---~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givH 139 (476)
T 2y94_A 65 REIQNLKLFRHPHIIKLYQ-VIST---PSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVVH 139 (476)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEEE---CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 4556788999999999888 5533 24577888875 999999996543 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.......
T Consensus 140 rDLkp~NIll~~~~~vkL~DFG~a~~~~~~~------------------------------------------------- 170 (476)
T 2y94_A 140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGE------------------------------------------------- 170 (476)
T ss_dssp SCCSGGGEEECTTCCEEECCCSSCEECCTTC-------------------------------------------------
T ss_pred ccccHHHEEEecCCCeEEEeccchhhccccc-------------------------------------------------
Confidence 9999999999999999999999884331110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.....+||+.|+|||++.+..+ +.++|||||||++|+
T Consensus 171 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~e 208 (476)
T 2y94_A 171 ------------------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA 208 (476)
T ss_dssp ------------------------------------------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHH
Confidence 0011468999999999988875 789999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|++ ||..... ......+....+.. .....+...+||.+||..||.+|||+.++++||||+...
T Consensus 209 lltG~~Pf~~~~~-~~~~~~i~~~~~~~-p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 209 LLCGTLPFDDDHV-PTLFKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp HHHSSCSSCCSSS-HHHHHHHHTTCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred HhhCCCCCCCCCH-HHHHHHHhcCCcCC-CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 998 6654433 23344444333221 112345566999999999999999999999999998643
No 97
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97 E-value=6.5e-31 Score=296.60 Aligned_cols=206 Identities=18% Similarity=0.234 Sum_probs=160.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.+ ...+++++|++ |++|.+++.... .+++.+++.|++||+.||.|||++||+|
T Consensus 95 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH 169 (504)
T 3q5i_A 95 NEISLLKSLDHPNIIKLFD-VFED---KKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIVH 169 (504)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEc---CCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4566788999999999888 5532 34677888874 889999985443 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++..+ .+||+|||++.......
T Consensus 170 ~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 203 (504)
T 3q5i_A 170 RDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY---------------------------------------------- 203 (504)
T ss_dssp SCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----------------------------------------------
T ss_pred CCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----------------------------------------------
Confidence 99999999998776 69999999884432110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....+||+.|+|||++.+ .|+.++|||||||++
T Consensus 204 ---------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 237 (504)
T 3q5i_A 204 ---------------------------------------------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIM 237 (504)
T ss_dssp ---------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHH
Confidence 0011468999999999864 599999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC--ch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP--PQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+|++ ||...... .....+....+. .. +....+...+||.+||..||.+|||+.|+|+||||+....
T Consensus 238 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 238 YILLCGYPPFGGQNDQ-DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310 (504)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence 99999 66554433 344444443332 22 2233455669999999999999999999999999986654
No 98
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97 E-value=2.3e-31 Score=277.41 Aligned_cols=205 Identities=17% Similarity=0.236 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+|+.++||||+++++ ++. ....+++++|+ .|++|.+++.. .+..+++..++.|+.||+.||+|||++|
T Consensus 69 ~E~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 144 (285)
T 3is5_A 69 AEIEVLKSLDHPNIIKIFE-VFE---DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144 (285)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEE---CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCchHHhHHH-hee---cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4556788999999999888 553 23456777777 58899998832 2345899999999999999999999999
Q ss_pred ceeccCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 103 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 103 IvHrDLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
|+||||||+||+++ ..+.+||+|||++.......
T Consensus 145 ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 181 (285)
T 3is5_A 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE------------------------------------------- 181 (285)
T ss_dssp CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------------------------------------------
T ss_pred EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc-------------------------------------------
Confidence 99999999999994 56789999999884332110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
......|++.|+|||.+. ..++.++||||||
T Consensus 182 ------------------------------------------------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG 212 (285)
T 3is5_A 182 ------------------------------------------------HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAG 212 (285)
T ss_dssp -----------------------------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHH
T ss_pred ------------------------------------------------cCcCcccccCcCChHHhc-cCCCcccCeehHH
Confidence 001146899999999985 4689999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhh-cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|++|+|++ ||............. .....+.......+...+|+.+||..||.+|||+.|+|+||||+.
T Consensus 213 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 213 VVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 99999998 665543322222111 122222222223456669999999999999999999999999985
No 99
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.97 E-value=1.8e-31 Score=291.08 Aligned_cols=242 Identities=17% Similarity=0.143 Sum_probs=146.4
Q ss_pred CCCCcccccccccccccccCceEEEEeeCCccHHHhh-cCCCCCCChhHHHHHHHHHHHHHHHhhhc-CceeccCCCCce
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVRPSCF 113 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l-~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHrDLkP~NI 113 (712)
+|+||+++++.+.........+++++|+.+++|.+++ ......+++.+++.|+.||+.||+|||++ ||+||||||+||
T Consensus 99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NI 178 (397)
T 1wak_A 99 NREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENI 178 (397)
T ss_dssp GGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGE
T ss_pred CcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHe
Confidence 4889999888443333355688999999988888888 33445699999999999999999999998 999999999999
Q ss_pred eecCCCcEEEEecccccCCCC---CCcc-cccccccccccCCCCCCC-chhHHHhhhccccccccccCCCCCCccccccc
Q 005147 114 VMSSFNHVSFIESASCSDSGS---DSHE-EGLNTQNMETKDLSSPLP-LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
|++.++.....+++....... .... ...... ..........+ .........+++.|||++...
T Consensus 179 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~----------- 246 (397)
T 1wak_A 179 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA-PATAGNFLVNPLEPKNAEKLKVKIADLGNACWV----------- 246 (397)
T ss_dssp EECCCHHHHHHHHHHHC----------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEET-----------
T ss_pred eEeccchhhhhhhhhhHHHhhcCCCCCCCCccccC-CcccccccccccccccccccceEeccccccccc-----------
Confidence 998765211111111000000 0000 000000 00000000000 000011122333444433211
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
... .....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 247 -----------------------------~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg 289 (397)
T 1wak_A 247 -----------------------------HKH--------FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 289 (397)
T ss_dssp -----------------------------TBC--------SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHS
T ss_pred -----------------------------ccc--------CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhC
Confidence 100 011468999999999999999999999999999999999
Q ss_pred --CCCCChh--------hHHHHHhhcccCCCchh---------------------------------------hhcCchh
Q 005147 268 --PFSTGEE--------KTRTMSSLRHRVLPPQL---------------------------------------LLKFPKE 298 (712)
Q Consensus 268 --pf~~~~~--------~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~ 298 (712)
||..... ....+..+.. ..|... ....+..
T Consensus 290 ~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
T 1wak_A 290 DYLFEPHSGEEYTRDEDHIALIIELLG-KVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGF 368 (397)
T ss_dssp SCSCCCCCCSSSCHHHHHHHHHHHHHC-SCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHH
T ss_pred CCCCCCCcccccCchHHHHHHHHHhcC-CCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHH
Confidence 6654321 1111111111 111100 0111234
Q ss_pred HHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.+||.+||..||++|||+.|+|+||||+.
T Consensus 369 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 369 TDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 58999999999999999999999999973
No 100
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.97 E-value=2.7e-31 Score=275.38 Aligned_cols=205 Identities=19% Similarity=0.265 Sum_probs=158.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+ .|++|.+++.... .+++.+++.|+.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H 129 (277)
T 3f3z_A 55 QEIEIMKSLDHPNIIRLYE-TFE---DNTDIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNVAH 129 (277)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEE---CSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEe---cCCeEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 4556788899999999888 553 23456777777 5889999885443 4899999999999999999999999999
Q ss_pred ccCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||++ +.++.++++|||++........
T Consensus 130 ~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~--------------------------------------------- 164 (277)
T 3f3z_A 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--------------------------------------------- 164 (277)
T ss_dssp CCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC---------------------------------------------
T ss_pred CCCCHHHEEEecCCCCCcEEEEecccceeccCccc---------------------------------------------
Confidence 9999999999 7788999999998844321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.....||+.|+|||.+.+. ++.++|||||||++
T Consensus 165 ----------------------------------------------~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l 197 (277)
T 3f3z_A 165 ----------------------------------------------MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMM 197 (277)
T ss_dssp ----------------------------------------------BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHH
T ss_pred ----------------------------------------------hhccCCCCCccChHHhccc-CCchhhehhHHHHH
Confidence 0014689999999998665 99999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--CCchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|+|++ ||...... .....+.... .+... ....+...+|+.+||..||.+|||+.++|+||||+...
T Consensus 198 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~ 269 (277)
T 3f3z_A 198 YVLLCGYPPFSAPTDS-EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL 269 (277)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence 99998 66554443 3333333332 22222 23345566999999999999999999999999997643
No 101
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.97 E-value=3.7e-31 Score=273.95 Aligned_cols=211 Identities=13% Similarity=0.148 Sum_probs=159.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++. ....+++++|+ .|++|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 54 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 128 (276)
T 2yex_A 54 KEICINKMLNHENVVKFYG-HRR---EGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITH 128 (276)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEE---ETTEEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCceeeee-EEE---cCCEEEEEEEecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4455688899999999888 443 23456777777 578999999654 34999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||.+.........
T Consensus 129 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 161 (276)
T 2yex_A 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRE----------------------------------------------- 161 (276)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECEETTEE-----------------------------------------------
T ss_pred cCCChHHEEEccCCCEEEeeCCCccccCCCcch-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
. ......|++.|+|||.+.+..+ +.++|||||||++|+
T Consensus 162 -------------------------------------~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 200 (276)
T 2yex_A 162 -------------------------------------R----LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 200 (276)
T ss_dssp -------------------------------------C----CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------h----cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHH
Confidence 0 0011468999999999987774 789999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccC-CCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++ ||................. ..+......+...+||.+||..||.+|||+.++++||||+....
T Consensus 201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 201 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 998 6655443323333322222 12222233455569999999999999999999999999997754
No 102
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=2.3e-31 Score=276.77 Aligned_cols=208 Identities=19% Similarity=0.210 Sum_probs=159.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. .....++++|+ .|++|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 54 ~e~~~l~~l~h~~i~~~~~-~~~---~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 128 (284)
T 3kk8_A 54 REARICRKLQHPNIVRLHD-SIQ---EESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNGIVH 128 (284)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---CSSEEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHcCCCCcCeEEE-EEE---cCCEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCc
Confidence 4556788899999999888 443 23456777777 588999988444 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++.++. ++++|||.+...+...
T Consensus 129 ~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 162 (284)
T 3kk8_A 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---------------------------------------------- 162 (284)
T ss_dssp SCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----------------------------------------------
T ss_pred CCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----------------------------------------------
Confidence 999999999986655 9999999884332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 163 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 197 (284)
T 3kk8_A 163 ---------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197 (284)
T ss_dssp ---------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHH
Confidence 00014689999999999999999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccC--CCc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRV--LPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
|+|++ ||...... .....+.... .+. ......+...+|+.+||+.||.+|||+.++|+||||+.....
T Consensus 198 ~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 198 YILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred HHHHHCCCCCCCCchh-HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence 99999 66554433 2333333222 222 222334556699999999999999999999999999876553
No 103
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=1.3e-31 Score=285.01 Aligned_cols=208 Identities=20% Similarity=0.253 Sum_probs=142.5
Q ss_pred ccceeeccCC-CCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~-H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+. ||||+++++ ++.+ ...+++++|+ .|++|.+++... ..+++.+++.|+.||+.||+|||++||+
T Consensus 54 ~e~~~l~~l~~h~niv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iv 128 (325)
T 3kn6_A 54 KEITALKLCEGHPNIVKLHE-VFHD---QLHTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVGVV 128 (325)
T ss_dssp HHHHHHHHTTTCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCeeEEEE-EEEc---CCEEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 3445566665 999999888 5532 3456778887 588999999554 3499999999999999999999999999
Q ss_pred eccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 105 VHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 105 HrDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||+||+++.++ .+||+|||++........
T Consensus 129 H~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------------- 164 (325)
T 3kn6_A 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-------------------------------------------- 164 (325)
T ss_dssp CCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------------------------------------------
T ss_pred ecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--------------------------------------------
Confidence 999999999998666 799999998843221100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......||+.|+|||++.+..++.++|||||||+
T Consensus 165 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i 198 (325)
T 3kn6_A 165 ----------------------------------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVI 198 (325)
T ss_dssp -----------------------------------------------------------------CCCCHHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCCCcCccCHHHhcCCCCCCccchHHHHHH
Confidence 0011467999999999999999999999999999
Q ss_pred HHHhhC---CCCCChh------hHHHHHhhcccCCC--chh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 262 LFELFC---PFSTGEE------KTRTMSSLRHRVLP--PQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 262 l~eLl~---pf~~~~~------~~~~~~~~~~~~~~--~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+|+|++ ||..... ....+..+....++ ... ....+...+||.+||..||.+|||+.++++||||+...
T Consensus 199 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~ 278 (325)
T 3kn6_A 199 LYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS 278 (325)
T ss_dssp HHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred HHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence 999998 5653221 12344444443332 222 23345566999999999999999999999999998753
No 104
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=280.38 Aligned_cols=211 Identities=13% Similarity=0.151 Sum_probs=160.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.. ...+++++|+ .|++|.+++......+++.++..++.||+.||.|||++||+|
T Consensus 73 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 148 (314)
T 3com_A 73 KEISIMQQCDSPHVVKYYG-SYFK---NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148 (314)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCccEEE-EEEe---CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 4556788899999999888 4422 3456777777 478999999644456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++|+|||.+........
T Consensus 149 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 180 (314)
T 3com_A 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDTMA------------------------------------------------ 180 (314)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECBTTBS------------------------------------------------
T ss_pred CCcCHHHEEECCCCCEEEeecccchhhhhhcc------------------------------------------------
Confidence 99999999999999999999998843311100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 181 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 218 (314)
T 3com_A 181 ------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218 (314)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHH
Confidence 00114679999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
++ ||......................... .+...+||.+||..||.+|||+.++|+||||+.....
T Consensus 219 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~ 288 (314)
T 3com_A 219 AEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGV 288 (314)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCG
T ss_pred HhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcc
Confidence 99 665443332222211111111111222 3445599999999999999999999999999987653
No 105
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.97 E-value=4.4e-31 Score=276.80 Aligned_cols=211 Identities=18% Similarity=0.235 Sum_probs=160.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+.+++|.+++... ...+++..++.++.||+.||.|||++||+|
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 126 (299)
T 2r3i_A 51 REISLLKELNHPNIVKLLD-VIHT---ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126 (299)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHcCCCCeeeEEE-EEec---CCceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 4566788899999999888 4432 3568899999888999999433 345899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+...+....
T Consensus 127 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 158 (299)
T 2r3i_A 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVR------------------------------------------------ 158 (299)
T ss_dssp CCCCGGGEEECTTSCEEECSTTHHHHHCCCSB------------------------------------------------
T ss_pred CCCCHHHeEEcCCCCEEECcchhhhhccCCcc------------------------------------------------
Confidence 99999999999999999999998743221100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||.+.+.. ++.++|||||||++|+
T Consensus 159 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~ 196 (299)
T 2r3i_A 159 ------------------------------------------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAE 196 (299)
T ss_dssp ------------------------------------------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHH
Confidence 000135799999999998766 8999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCc-----------------------h----hhhcCchhHHHHHHcCCCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPP-----------------------Q----LLLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~-----------------------~----~~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
|++ ||..................+. . .....+...+||.+||..||++||
T Consensus 197 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 276 (299)
T 2r3i_A 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 276 (299)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCC
Confidence 999 6665544332222221100000 0 011223445999999999999999
Q ss_pred CHHHHhcCcCCCCCcCc
Q 005147 315 KMGELLQSEFLNEPRDS 331 (712)
Q Consensus 315 t~~eiL~hp~~~~~~~~ 331 (712)
|+.++|+||||+....+
T Consensus 277 t~~~~l~hp~~~~~~~~ 293 (299)
T 2r3i_A 277 SAKAALAHPFFQDVTKP 293 (299)
T ss_dssp CHHHHHTSGGGTTCCCC
T ss_pred CHHHHhcChhhhcCCCC
Confidence 99999999999987654
No 106
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97 E-value=1.1e-31 Score=283.80 Aligned_cols=216 Identities=16% Similarity=0.182 Sum_probs=151.5
Q ss_pred ccceeecc-CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|.. .+||||+++++ ++.+ ...+++++|+ .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 59 ~E~~~l~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iv 133 (316)
T 2ac3_A 59 REVEMLYQCQGHRNVLELIE-FFEE---EDRFYLVFEKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKGIA 133 (316)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCCCeeeEEE-EEee---CCEEEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 34445555 68999999888 5532 3467788887 489999999544 3489999999999999999999999999
Q ss_pred eccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 105 VHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 105 HrDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||+||+++.++. +||+|||++........... .
T Consensus 134 H~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~---------- 173 (316)
T 2ac3_A 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP------------------------------I---------- 173 (316)
T ss_dssp CCCCCGGGEEESCSSSSCSEEECCTTCCC---------------------------------------------------
T ss_pred eCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccc------------------------------c----------
Confidence 9999999999997766 99999998854321100000 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----CCCCCccchH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIY 256 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIw 256 (712)
.........||+.|+|||++.+ ..++.++|||
T Consensus 174 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diw 210 (316)
T 2ac3_A 174 -------------------------------------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLW 210 (316)
T ss_dssp ---------------------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHH
T ss_pred -------------------------------------------cccccccccCCcCccChHHhhcccccccCCCcccccH
Confidence 0000011468999999999975 4589999999
Q ss_pred HHHHHHHHhhC---CCCCChh--------------hHHHHHhhcccC--CCchhh-hcCchhHHHHHHcCCCCCCCCCCH
Q 005147 257 RLGVLLFELFC---PFSTGEE--------------KTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~--------------~~~~~~~~~~~~--~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~ 316 (712)
||||++|||++ ||..... .......+.... +|.... ...+...+||.+||..||.+|||+
T Consensus 211 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 290 (316)
T 2ac3_A 211 SLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA 290 (316)
T ss_dssp HHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCH
Confidence 99999999999 6654321 112223333222 222222 234455699999999999999999
Q ss_pred HHHhcCcCCCCCcC
Q 005147 317 GELLQSEFLNEPRD 330 (712)
Q Consensus 317 ~eiL~hp~~~~~~~ 330 (712)
.|+|+||||+....
T Consensus 291 ~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 291 AQVLQHPWVQGCAP 304 (316)
T ss_dssp HHHHHSTTCC----
T ss_pred HHHhcChhhcCCCC
Confidence 99999999997543
No 107
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=2.9e-32 Score=295.43 Aligned_cols=208 Identities=12% Similarity=0.092 Sum_probs=141.9
Q ss_pred ceeeccCCCCCccccccccc------cccc--------------ccCceEEEEeeCCccHHHhhcCCCCCCChhHH----
Q 005147 29 GVELTHGDHLRNQGGLSGVC------ENEA--------------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC---- 84 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~------~~~~--------------~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~---- 84 (712)
...|.. +||||++++..++ .... ....++++||+.+++|.+++...+..++....
T Consensus 116 ~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~ 194 (371)
T 3q60_A 116 AARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194 (371)
T ss_dssp HHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHH
T ss_pred HHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhh
Confidence 345666 8999888654332 1000 11347999999889999999654444555555
Q ss_pred --HHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 85 --LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 85 --~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..+..
T Consensus 195 vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------- 247 (371)
T 3q60_A 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--------------------------- 247 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---------------------------
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC---------------------------
Confidence 677799999999999999999999999999999999999999988533211
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
.....+++.|+|||
T Consensus 248 ------------------------------------------------------------------~~~~~~t~~y~aPE 261 (371)
T 3q60_A 248 ------------------------------------------------------------------GPASSVPVTYAPRE 261 (371)
T ss_dssp ------------------------------------------------------------------EEGGGSCGGGCCHH
T ss_pred ------------------------------------------------------------------ccCccCCcCCcChh
Confidence 00135679999999
Q ss_pred cccC--CCCCCccchHHHHHHHHHhhC---CCCCChhhHHH-HHh---hc--c-cCCCchhhhcCchhHHHHHHcCCCCC
Q 005147 243 ELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRT-MSS---LR--H-RVLPPQLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 243 ~~~~--~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~-~~~---~~--~-~~~~~~~~~~~~~~~~li~~~L~~dP 310 (712)
++.+ ..++.++|||||||++|||++ ||......... +.. .. . ....+......+...+||.+||+.||
T Consensus 262 ~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 341 (371)
T 3q60_A 262 FLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDR 341 (371)
T ss_dssp HHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSST
T ss_pred hccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCCh
Confidence 9987 669999999999999999998 55543211000 000 00 0 01111112234455699999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcC
Q 005147 311 SGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|||+.++|+||||+....
T Consensus 342 ~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 342 RRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp TTCCCHHHHTTSHHHHHHHH
T ss_pred hhCCCHHHHhcCHHHHHHHH
Confidence 99999999999999986543
No 108
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=292.56 Aligned_cols=211 Identities=15% Similarity=0.171 Sum_probs=151.2
Q ss_pred eccceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+|..+ +||||+++++ ++. ....+++++|+++++|.+++......++..++..|+.||+.||.|||++||+
T Consensus 65 ~~E~~~l~~l~~HpnIv~l~~-~~~---~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 140 (432)
T 3p23_A 65 DREVQLLRESDEHPNVIRYFC-TEK---DRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIV 140 (432)
T ss_dssp HHHHHHHHHSCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhccCCCCcCeEEE-EEe---cCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCE
Confidence 3555677777 8999999887 442 3456799999998999999976665577778899999999999999999999
Q ss_pred eccCCCCceeecCC-----CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 105 VHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 105 HrDLkP~NIll~~~-----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
||||||+||+++.. ..+||+|||+++........ +
T Consensus 141 HrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~--------------------------------~-------- 180 (432)
T 3p23_A 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS--------------------------------F-------- 180 (432)
T ss_dssp CCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----------------------------------------------
T ss_pred eCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc--------------------------------e--------
Confidence 99999999999532 25789999988543211000 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---CCCCCccchH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIY 256 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIw 256 (712)
.......||++|+|||++.+ ..++.++|||
T Consensus 181 -----------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Diw 213 (432)
T 3p23_A 181 -----------------------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIF 213 (432)
T ss_dssp ----------------------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHH
T ss_pred -----------------------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHHH
Confidence 00011568999999999974 5578899999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCch--hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
||||++|||++ ||...... ...........+.. .....+...+||.+||+.||.+|||+.++|+||||...
T Consensus 214 SlG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 214 SAGCVFYYVISEGSHPFGKSLQR-QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HHHHHHHHHHTTSCBTTBSTTTH-HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HHHHHHHHHHcCCCCCcchhhHH-HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 99999999998 44322221 11111111111111 11112234589999999999999999999999999864
No 109
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.97 E-value=6.2e-31 Score=276.08 Aligned_cols=210 Identities=18% Similarity=0.215 Sum_probs=157.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++......+++.++..++.||+.||.|||++||+|
T Consensus 65 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 140 (302)
T 2j7t_A 65 VEIEILATCDHPYIVKLLG-AYYH---DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140 (302)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCEeeeee-eeee---CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 3455678899999999888 4432 2456777777 588999998654556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++...... .
T Consensus 141 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------------------------~-------------- 171 (302)
T 2j7t_A 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKT-----------------------------------L-------------- 171 (302)
T ss_dssp CCCSGGGEEECTTSCEEECCCHHHHHHHHH-----------------------------------H--------------
T ss_pred CCCCHHHEEECCCCCEEEEECCCCcccccc-----------------------------------c--------------
Confidence 999999999999999999999976211000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc-----cCCCCCCccchHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-----AGAPVSCASDIYRLGV 260 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-----~~~~~~~~sDIwSlGv 260 (712)
. ......|++.|+|||.+ .+..++.++|||||||
T Consensus 172 ----------------------------------~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~ 210 (302)
T 2j7t_A 172 ----------------------------------Q-------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 210 (302)
T ss_dssp ----------------------------------H-------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHH
T ss_pred ----------------------------------c-------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHH
Confidence 0 00114689999999998 4667899999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhhcccCCCc-hhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
++|+|++ ||........ ...+.....+. ..... .+...+++.+||..||.+|||+.++++||||......
T Consensus 211 il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~ 285 (302)
T 2j7t_A 211 TLIEMAQIEPPHHELNPMRV-LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285 (302)
T ss_dssp HHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred HHHHHhcCCCCCccCCHHHH-HHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence 9999998 5554443322 22222222221 12223 3445599999999999999999999999999987664
No 110
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=2e-31 Score=301.46 Aligned_cols=207 Identities=14% Similarity=0.181 Sum_probs=159.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..++||||+.+++ ++.+ ...++++||+ .|++|.+++... ...+++..++.|+.||+.||+|||++||+
T Consensus 233 ~E~~iL~~l~hp~Iv~l~~-~~~~---~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIv 308 (576)
T 2acx_A 233 NEKQILEKVNSRFVVSLAY-AYET---KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV 308 (576)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHcCCCCEeeEEE-EEee---CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 3556788899999999887 5532 3467788887 599999999543 33489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.+|.+||+|||++.......
T Consensus 309 HrDLKPeNILld~~g~vKL~DFGla~~~~~~~------------------------------------------------ 340 (576)
T 2acx_A 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQ------------------------------------------------ 340 (576)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred ccCCchheEEEeCCCCeEEEecccceecccCc------------------------------------------------
Confidence 99999999999999999999999885431110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 341 -------------------------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilye 377 (576)
T 2acx_A 341 -------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYE 377 (576)
T ss_dssp -------------------------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHH
Confidence 0011478999999999999889999999999999999
Q ss_pred hhC---CCCCChh---hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 265 LFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 265 Ll~---pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
|++ ||..... .......+... .........+...+||.+||..||.+|| ++.|+++||||+...
T Consensus 378 LltG~~PF~~~~~~~~~~~i~~~i~~~-~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~ 452 (576)
T 2acx_A 378 MIAGQSPFQQRKKKIKREEVERLVKEV-PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452 (576)
T ss_dssp HHHSSCSSSCSSSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred HHhCCCCCcccccchhHHHHHHHhhcc-cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence 999 6654321 12222222221 1111122345566999999999999999 799999999999753
No 111
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97 E-value=8.5e-31 Score=278.17 Aligned_cols=207 Identities=18% Similarity=0.235 Sum_probs=156.0
Q ss_pred eccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 32 LTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
|..++||||+++++ ++... .....+++++|+.+++|.+++.. ....+++.+++.++.||+.||.|||++||+||||
T Consensus 68 l~~~~h~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dl 146 (326)
T 1blx_A 68 LETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 146 (326)
T ss_dssp HHHTCCTTBCCEEE-EEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred hhccCCCCeEeeee-eeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence 33448999999888 44311 23457889999988899999943 3345899999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||+++.++.++|+|||++...+...
T Consensus 147 kp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 174 (326)
T 1blx_A 147 KPQNILVTSSGQIKLADFGLARIYSFQM---------------------------------------------------- 174 (326)
T ss_dssp CGGGEEECTTCCEEECSCCSCCCCCGGG----------------------------------------------------
T ss_pred CHHHeEEcCCCCEEEecCcccccccCCC----------------------------------------------------
Confidence 9999999999999999999884321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 175 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 215 (326)
T 1blx_A 175 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215 (326)
T ss_dssp ---------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcC
Confidence 0011467999999999999899999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCC------------------------chhhh-cCchhHHHHHHcCCCCCCCCCCHHHHh
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLP------------------------PQLLL-KFPKEASFCLWLLHPEPSGRPKMGELL 320 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~------------------------~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL 320 (712)
||............+.....+ ..... ..+...+||.+||..||.+|||+.++|
T Consensus 216 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 295 (326)
T 1blx_A 216 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295 (326)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 665544332222211100000 00111 223345999999999999999999999
Q ss_pred cCcCCCCCcC
Q 005147 321 QSEFLNEPRD 330 (712)
Q Consensus 321 ~hp~~~~~~~ 330 (712)
+||||+....
T Consensus 296 ~hp~~~~~~~ 305 (326)
T 1blx_A 296 SHPYFQDLER 305 (326)
T ss_dssp TSGGGTTCCC
T ss_pred cCccccccch
Confidence 9999997754
No 112
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.97 E-value=4.2e-31 Score=274.06 Aligned_cols=207 Identities=17% Similarity=0.227 Sum_probs=137.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+. +++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 60 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 135 (278)
T 3cok_A 60 NEVKIHCQLKHPSILELYN-YFED---SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILH 135 (278)
T ss_dssp HHHHHHTTBCCTTBCCEEE-EEEC---SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCeEeEEE-EEcc---CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4455688899999999888 5432 34567777774 88999999776667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+........
T Consensus 136 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 167 (278)
T 3cok_A 136 RDLTLSNLLLTRNMNIKIADFGLATQLKMPHE------------------------------------------------ 167 (278)
T ss_dssp SSCCGGGEEECTTCCEEECCCTTCEECC----------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEEeecceeeccCCCC------------------------------------------------
Confidence 99999999999999999999998843321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 168 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 205 (278)
T 3cok_A 168 ------------------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTL 205 (278)
T ss_dssp ------------------------------------------------------------------CTHHHHHHHHHHHH
T ss_pred ------------------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHH
Confidence 00014679999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||...... .....+...... ......+...+++.+||..||.+|||+.++|+||||....
T Consensus 206 ~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 206 LIGRPPFDTDTVK-NTLNKVVLADYE-MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHSSCSSCCCSCC------CCSSCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HhCCCCCCChhHH-HHHHHHhhcccC-CccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 98 55543322 112222111111 1111234556999999999999999999999999998754
No 113
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.97 E-value=3.2e-31 Score=275.19 Aligned_cols=205 Identities=17% Similarity=0.220 Sum_probs=157.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .+++|.+++.... .+++.++..++.||+.||+|||++||+|
T Consensus 58 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~H 132 (279)
T 3fdn_A 58 REVEIQSHLRHPNILRLYG-YFHD---ATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIH 132 (279)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHcCCCCCCcchhh-eEec---CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 3556788899999999888 5532 3456777777 5789999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++......
T Consensus 133 ~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-------------------------------------------------- 162 (279)
T 3fdn_A 133 RDIKPENLLLGSAGELKIADFGWSVHAPSS-------------------------------------------------- 162 (279)
T ss_dssp CCCCGGGEEECTTSCEEECSCCEESCC-----------------------------------------------------
T ss_pred ccCChHhEEEcCCCCEEEEeccccccCCcc--------------------------------------------------
Confidence 999999999999999999999987332111
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 163 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 200 (279)
T 3fdn_A 163 ------------------------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200 (279)
T ss_dssp -----------------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHH
Confidence 00114679999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... .....+.....+ ......+...+||.+||..||.+|||+.++|+||||+....
T Consensus 201 ~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 201 LVGKPPFEANTYQ-ETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHHTCCC-CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred HHCCCCCCCCcHH-HHHHHHHhCCCC-CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 98 66544332 223332222111 11122344569999999999999999999999999986543
No 114
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97 E-value=1.2e-31 Score=287.15 Aligned_cols=203 Identities=17% Similarity=0.196 Sum_probs=153.7
Q ss_pred eeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
++..+ +||||+++++ ++.+ ...++++||+ .|++|.+++...+ .+++.++..++.||+.||+|||++||+||||
T Consensus 68 ~l~~~~~hp~iv~~~~-~~~~---~~~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~givHrDl 142 (342)
T 2qr7_A 68 ILLRYGQHPNIITLKD-VYDD---GKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVVHRDL 142 (342)
T ss_dssp HHHHHTTSTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred HHHHhcCCCCcCeEEE-EEEc---CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEeccC
Confidence 44444 8999999888 5532 3467788887 5899999996544 4999999999999999999999999999999
Q ss_pred CCCceeecCC----CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 109 RPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 109 kP~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||+||++... +.+||+|||++........
T Consensus 143 kp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------------- 175 (342)
T 2qr7_A 143 KPSNILYVDESGNPESIRICDFGFAKQLRAENG----------------------------------------------- 175 (342)
T ss_dssp CGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-----------------------------------------------
T ss_pred CHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-----------------------------------------------
Confidence 9999998533 3599999998843211100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 176 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 212 (342)
T 2qr7_A 176 -------------------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYT 212 (342)
T ss_dssp -------------------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHH
Confidence 0011468999999999988789999999999999999
Q ss_pred hhC---CCCCC--hhhHHHHHhhcccCCC--chh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTG--EEKTRTMSSLRHRVLP--PQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~--~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||... ......+..+....++ ... ....+...+||.+||..||.+|||+.++|+||||...
T Consensus 213 ll~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 213 MLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp HHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred HhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 999 66532 2233344444433322 222 2234455699999999999999999999999999653
No 115
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=4.5e-31 Score=284.42 Aligned_cols=211 Identities=15% Similarity=0.138 Sum_probs=154.6
Q ss_pred ceeeccCCCCCccccccccccccc---ccCceEEEEeeCCccHHHhhc---CCCCCCChhHHHHHHHHHHHHHHHhh--h
Q 005147 29 GVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH--S 100 (712)
Q Consensus 29 ~~~l~~~~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~g~sL~~~l~---~~~~~l~~~~~~~i~~qil~~l~~lH--s 100 (712)
...++.++||||+++++.++.... ....+++++|+.+++|.+.+. .....+++..+..++.||+.||.||| +
T Consensus 70 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 149 (360)
T 3e3p_A 70 MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS 149 (360)
T ss_dssp HHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 334677899999999883332211 112378899998778776552 34455899999999999999999999 9
Q ss_pred cCceeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 101 QGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||+||||||+||+++. ++.+||+|||++.......
T Consensus 150 ~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 186 (360)
T 3e3p_A 150 VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE------------------------------------------- 186 (360)
T ss_dssp TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS-------------------------------------------
T ss_pred CCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC-------------------------------------------
Confidence 99999999999999996 8999999999885432210
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC-CCCccchHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 258 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSl 258 (712)
......||+.|+|||++.+.. ++.++|||||
T Consensus 187 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 218 (360)
T 3e3p_A 187 ------------------------------------------------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSV 218 (360)
T ss_dssp ------------------------------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CcccccCCcceeCHHHHcCCCCCCcHHHHHHH
Confidence 001146799999999997665 8999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCCc-h---------------------hh--------hcCchhHHHHHHc
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-Q---------------------LL--------LKFPKEASFCLWL 305 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~-~---------------------~~--------~~~~~~~~li~~~ 305 (712)
||++|+|++ ||..................++ . +. ...+...+||.+|
T Consensus 219 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 298 (360)
T 3e3p_A 219 GCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSAL 298 (360)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHH
Confidence 999999998 6665443322222211110110 0 00 0123455999999
Q ss_pred CCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 306 LHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 306 L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|+.||.+|||+.|+|+||||+....
T Consensus 299 L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 299 LQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp TCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred hccCccccCCHHHHhcCccccccCC
Confidence 9999999999999999999997754
No 116
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=1.7e-32 Score=298.04 Aligned_cols=200 Identities=12% Similarity=0.082 Sum_probs=147.4
Q ss_pred eeeccCCCCCcccccccc------ccccc----------cc----CceEEEEeeCCccHHHhhcCCCC------CCChhH
Q 005147 30 VELTHGDHLRNQGGLSGV------CENEA----------AI----DPFVHAIEWGDVSLRQWLDKPKR------SVDVYE 83 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~------~~~~~----------~~----~~~~l~~e~~g~sL~~~l~~~~~------~l~~~~ 83 (712)
.+|+.++||||+++++.+ +++.. .. ...+++||+.+++|.+++...+. .+++..
T Consensus 128 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~ 207 (377)
T 3byv_A 128 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 207 (377)
T ss_dssp GGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHH
T ss_pred HhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHH
Confidence 567888999999987422 22111 00 13788899989999999954321 233488
Q ss_pred HHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHh
Q 005147 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (712)
Q Consensus 84 ~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (712)
++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++..+..
T Consensus 208 ~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------------------------- 259 (377)
T 3byv_A 208 RLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------------------------- 259 (377)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE----------------------------
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc----------------------------
Confidence 8899999999999999999999999999999999999999999988432110
Q ss_pred hhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccc
Q 005147 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (712)
Q Consensus 164 ~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (712)
.....| +.|+|||+
T Consensus 260 -----------------------------------------------------------------~~~~~g-~~y~aPE~ 273 (377)
T 3byv_A 260 -----------------------------------------------------------------VVSSVS-RGFEPPEL 273 (377)
T ss_dssp -----------------------------------------------------------------EECCCC-TTCCCHHH
T ss_pred -----------------------------------------------------------------ccCCCC-cCccChhh
Confidence 011467 99999999
Q ss_pred ccCC-----------CCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCC
Q 005147 244 LAGA-----------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPE 309 (712)
Q Consensus 244 ~~~~-----------~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (712)
+.+. .++.++|||||||++|||++ ||...... .....+... .....+...+||.+||..|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~~~~~-----~~~~~~~~~~li~~~L~~d 347 (377)
T 3byv_A 274 EARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL-GGSEWIFRS-----CKNIPQPVRALLEGFLRYP 347 (377)
T ss_dssp HHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------CCSGGGGSS-----CCCCCHHHHHHHHHHTCSS
T ss_pred hcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-cchhhhhhh-----ccCCCHHHHHHHHHHcCCC
Confidence 9887 79999999999999999999 55432211 111111110 1122345569999999999
Q ss_pred CCCCCCHHHHhcCcCCCCCc
Q 005147 310 PSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 310 P~~Rpt~~eiL~hp~~~~~~ 329 (712)
|.+|||+.++|+||||+...
T Consensus 348 p~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 348 KEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp GGGCCCHHHHHTSHHHHHHH
T ss_pred chhCCCHHHHhhChHHHHHH
Confidence 99999999999999997643
No 117
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.97 E-value=2.7e-31 Score=276.24 Aligned_cols=202 Identities=15% Similarity=0.140 Sum_probs=146.8
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++...+..+ +||||+++++ ++. ....+++++|+. |++|.+++... ...+++.+++.|+.||+.||.|||++
T Consensus 59 ~e~~~~~~l~~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 134 (289)
T 1x8b_A 59 REVYAHAVLGQHSHVVRYFS-AWA---EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 134 (289)
T ss_dssp HHHHHHHHSCSCTTBCCEEE-EEE---ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCeeeeee-eee---cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 444455666 9999999888 442 234677888875 88999999432 24489999999999999999999999
Q ss_pred CceeccCCCCceeecCCC-------------------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 102 GIVVHNVRPSCFVMSSFN-------------------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~-------------------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
||+||||||+||+++.++ .++++|||.+......
T Consensus 135 ~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------- 187 (289)
T 1x8b_A 135 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP--------------------------- 187 (289)
T ss_dssp TEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS---------------------------
T ss_pred CEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---------------------------
Confidence 999999999999998555 5666666655221110
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
....|++.|+|||
T Consensus 188 -------------------------------------------------------------------~~~~gt~~y~aPE 200 (289)
T 1x8b_A 188 -------------------------------------------------------------------QVEEGDSRFLANE 200 (289)
T ss_dssp -------------------------------------------------------------------CCCCCCGGGCCHH
T ss_pred -------------------------------------------------------------------cccCCCccccChh
Confidence 0135799999999
Q ss_pred cccCC-CCCCccchHHHHHHHHHhhC--CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 243 ELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 243 ~~~~~-~~~~~sDIwSlGvll~eLl~--pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
++.+. .++.++|||||||++|+|++ |++..... ...+.....+.......+...+|+.+||..||.+|||+.++
T Consensus 201 ~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 277 (289)
T 1x8b_A 201 VLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMAL 277 (289)
T ss_dssp HHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHH
Confidence 99876 46789999999999999999 33333222 23333333333333334556699999999999999999999
Q ss_pred hcCcCCCCCc
Q 005147 320 LQSEFLNEPR 329 (712)
Q Consensus 320 L~hp~~~~~~ 329 (712)
|+||||....
T Consensus 278 l~h~~~~~~~ 287 (289)
T 1x8b_A 278 VKHSVLLSAS 287 (289)
T ss_dssp HTCTTC----
T ss_pred hhChHhhhhc
Confidence 9999998753
No 118
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.97 E-value=3.5e-31 Score=280.99 Aligned_cols=204 Identities=21% Similarity=0.242 Sum_probs=154.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++... .+++++|+ .|++|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 64 ~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 137 (322)
T 2ycf_A 64 TEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENGIIH 137 (322)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCceEee-EEcCC----ceEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4566788899999999888 55322 36777777 588999999554 45999999999999999999999999999
Q ss_pred ccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++.++. +||+|||++...+...
T Consensus 138 ~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 171 (322)
T 2ycf_A 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---------------------------------------------- 171 (322)
T ss_dssp CCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----------------------------------------------
T ss_pred cCCCHHHEEEecCCCCCeEEEccCccceeccccc----------------------------------------------
Confidence 999999999987664 9999999885432110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 259 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlG 259 (712)
......|++.|+|||++. ...++.++||||||
T Consensus 172 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 206 (322)
T 2ycf_A 172 ---------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206 (322)
T ss_dssp ---------------------------------------------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcCccCchhhccCCCCCCCchhhHHHHH
Confidence 000146899999999974 45689999999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccC--CCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
|++|+|++ ||............+.... ..+... ...+...+||.+||..||.+|||+.++|+||||+.
T Consensus 207 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 207 VILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp HHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred HHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 99999999 5544332222222222222 222222 33445569999999999999999999999999985
No 119
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=1.5e-31 Score=282.42 Aligned_cols=213 Identities=17% Similarity=0.276 Sum_probs=159.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++.+.........++++||+. |++|.+++...+ .+++.+++.++.||+.||+|||++||+|
T Consensus 61 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH 139 (311)
T 3ork_A 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIH 139 (311)
T ss_dssp HHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 55667889999999998883332222223457777775 899999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 140 ~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~----------------------------------------------- 172 (311)
T 3ork_A 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNS----------------------------------------------- 172 (311)
T ss_dssp CCCCGGGEEEETTSCEEECCCSCC--------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEeeccCcccccccccc-----------------------------------------------
Confidence 999999999999999999999988543221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........||+.|+|||++.+..++.++|||||||++|+|
T Consensus 173 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 212 (311)
T 3ork_A 173 ----------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212 (311)
T ss_dssp -------------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHH
Confidence 0000114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchh-hh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQL-LL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
++ ||..................++.. .. ..+...+||.+||..||.+||++.++|.|+|++.
T Consensus 213 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 213 LTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 99 776665554445555544444332 22 3345559999999999999999999999999763
No 120
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97 E-value=9.1e-31 Score=278.63 Aligned_cols=208 Identities=19% Similarity=0.264 Sum_probs=155.9
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+..++..+ .||||+++++ ++. ....+++++|+ .|++|.+++.. ....+++.+++.|+.||+.||+|||++||+
T Consensus 78 e~~~l~~l~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~giv 153 (327)
T 3lm5_A 78 EIAVLELAKSCPRVINLHE-VYE---NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153 (327)
T ss_dssp HHHHHHHTTTCTTBCCEEE-EEE---CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhccCCCCEEEEEE-EEE---eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 34445555 6799999888 553 23456777776 58899999843 345689999999999999999999999999
Q ss_pred eccCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 105 VHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 105 HrDLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||||||+||+++. .+.+||+|||++...+...
T Consensus 154 H~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~--------------------------------------------- 188 (327)
T 3lm5_A 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--------------------------------------------- 188 (327)
T ss_dssp CSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------------------------------------------
T ss_pred cCcCChHHEEEecCCCCCcEEEeeCccccccCCcc---------------------------------------------
Confidence 9999999999987 7899999999885432110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||++.+..++.++|||||||+
T Consensus 189 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 222 (327)
T 3lm5_A 189 ----------------------------------------------ELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222 (327)
T ss_dssp ---------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCccCCeeecCCCCCchhhHHHHHHH
Confidence 0001468999999999999999999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhc-ccCCCc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLR-HRVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|+|++ ||.............. ...++. ......+...+||.+||..||.+|||+.++|+||||+....
T Consensus 223 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~ 296 (327)
T 3lm5_A 223 AYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF 296 (327)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred HHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence 999998 6655444322222111 112222 22333445569999999999999999999999999987643
No 121
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.97 E-value=2.7e-31 Score=284.09 Aligned_cols=204 Identities=17% Similarity=0.181 Sum_probs=157.3
Q ss_pred eccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc-Cceecc
Q 005147 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHN 107 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHrD 107 (712)
+..++||||+++++ ++.. ...+++++|+.+++|.+++.. ....+++..++.|+.||+.||+|||++ ||+|||
T Consensus 104 ~~~~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~D 179 (340)
T 3an0_A 104 MRTVDCPFTVTFYG-ALFR---EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRD 179 (340)
T ss_dssp HTTCCCTTTCCEEE-EEEC---SSCEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCS
T ss_pred HhhcCCCcEEEEee-EEEe---CCcEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCC
Confidence 67799999999888 4432 346889999987899998842 445699999999999999999999997 999999
Q ss_pred CCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 108 LkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|||+||+++.++.+||+|||++.......
T Consensus 180 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------- 208 (340)
T 3an0_A 180 VKPSNVLINALGQVKMCDFGISGYLVDSV--------------------------------------------------- 208 (340)
T ss_dssp CCSTTEEECSTTCEEECCCSHHHHHSCHH---------------------------------------------------
T ss_pred CCHHHEEECCCCCEEEeeCCCceeccccc---------------------------------------------------
Confidence 99999999999999999999874321100
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC----CCCCCccchHHHHHHHH
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLLF 263 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 209 ----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~ 248 (340)
T 3an0_A 209 ----------------------------------------AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 248 (340)
T ss_dssp ----------------------------------------HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHH
Confidence 0011368999999999743 36899999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++ ||.........+........+..... ..+...+||.+||..||.+|||+.++++||||+....
T Consensus 249 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 319 (340)
T 3an0_A 249 ELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 319 (340)
T ss_dssp HHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTT
T ss_pred HHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccccc
Confidence 9998 66654333333333333333332222 3345569999999999999999999999999986543
No 122
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=5.9e-31 Score=280.39 Aligned_cols=205 Identities=17% Similarity=0.239 Sum_probs=150.8
Q ss_pred cceeeccCCCCC------cccccccccccccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 28 DGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 28 ~~~~l~~~~H~n------i~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+..++..+.|+| ++.+++ ++. ....+++++|+.+++|.+++... ...+++.+++.++.||+.||+|||+
T Consensus 61 e~~~l~~l~~~~~~~~~~i~~~~~-~~~---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 136 (339)
T 1z57_A 61 EIQVLEHLNTTDPNSTFRCVQMLE-WFE---HHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136 (339)
T ss_dssp HHHHHHHHHHHCTTCTTCBCCEEE-EEE---ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCCCceeeEeeec-ccc---cCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 344566666654 777666 442 23478899999999999999443 3458999999999999999999999
Q ss_pred cCceeccCCCCceeecC-------------------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHH
Q 005147 101 QGIVVHNVRPSCFVMSS-------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~-------------------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (712)
+||+||||||+||+++. ++.+|++|||++...+..
T Consensus 137 ~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------------- 190 (339)
T 1z57_A 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-------------------------- 190 (339)
T ss_dssp TTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC--------------------------
T ss_pred CCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc--------------------------
Confidence 99999999999999987 556788877776321100
Q ss_pred HhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCc
Q 005147 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (712)
Q Consensus 162 ~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (712)
.....||+.|+||
T Consensus 191 -------------------------------------------------------------------~~~~~gt~~y~aP 203 (339)
T 1z57_A 191 -------------------------------------------------------------------HSTLVSTRHYRAP 203 (339)
T ss_dssp -------------------------------------------------------------------CCSSCSCGGGCCH
T ss_pred -------------------------------------------------------------------cccccCCccccCh
Confidence 0014689999999
Q ss_pred ccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHH--HHHhhcccCCCchhh------------------------
Q 005147 242 EELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL------------------------ 292 (712)
Q Consensus 242 E~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~--~~~~~~~~~~~~~~~------------------------ 292 (712)
|++.+..++.++|||||||++|||++ ||........ .+..+. ...|....
T Consensus 204 E~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (339)
T 1z57_A 204 EVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGR 282 (339)
T ss_dssp HHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHH
T ss_pred HHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccccc
Confidence 99999899999999999999999998 6654433221 111111 11111110
Q ss_pred -----------------hcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 293 -----------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 293 -----------------~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
...+...+||.+||..||.+|||+.|+|+||||+....
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 283 YVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred hhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 01123459999999999999999999999999987654
No 123
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=4.6e-31 Score=282.64 Aligned_cols=215 Identities=18% Similarity=0.173 Sum_probs=158.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC------------------------------
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------------------------ 75 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~------------------------------ 75 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .|++|.+++...
T Consensus 77 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (345)
T 3hko_A 77 TEVRLMKKLHHPNIARLYE-VYED---EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152 (345)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHS
T ss_pred HHHHHHHhCCCCCcceeeh-hhcc---CCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 3556788899999999888 5532 3457777777 599999998410
Q ss_pred ---------CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCC--cEEEEecccccCCCCCCcccccccc
Q 005147 76 ---------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQ 144 (712)
Q Consensus 76 ---------~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~--~vkl~dfg~~~~~~~~~~~~~~~~~ 144 (712)
...+++..++.|+.||+.||+|||++||+||||||+||+++.++ .+||+|||++.........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~------ 226 (345)
T 3hko_A 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG------ 226 (345)
T ss_dssp CC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------
T ss_pred ccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc------
Confidence 11246788999999999999999999999999999999998776 8999999988532111000
Q ss_pred cccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCC
Q 005147 145 NMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQP 224 (712)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 224 (712)
T Consensus 227 -------------------------------------------------------------------------------- 226 (345)
T 3hko_A 227 -------------------------------------------------------------------------------- 226 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccccCccccCcccccC--CCCCCccchHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCC-C-chhhhcCch
Q 005147 225 FPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-P-PQLLLKFPK 297 (712)
Q Consensus 225 ~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 297 (712)
.........||+.|+|||.+.+ ..++.++|||||||++|||++ ||............+..... + +......+.
T Consensus 227 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (345)
T 3hko_A 227 EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPL 306 (345)
T ss_dssp --------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHH
T ss_pred ccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHH
Confidence 0000011468999999999975 568999999999999999998 66655444333333322221 2 222233456
Q ss_pred hHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 298 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
..+||.+||..||.+|||+.++|+||||+.....
T Consensus 307 ~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 307 ARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340 (345)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred HHHHHHHHcCCChhHCCCHHHHhcChhhccChHh
Confidence 6699999999999999999999999999987653
No 124
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97 E-value=8.2e-31 Score=276.50 Aligned_cols=209 Identities=17% Similarity=0.192 Sum_probs=152.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+ .+++|.+++... ..+++..+..++.||+.||.|||++||+|
T Consensus 51 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~ivH 125 (311)
T 4agu_A 51 REIRMLKQLKHPNLVNLLE-VFR---RKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCIH 125 (311)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCccchhh-eee---cCCeEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence 4666788899999999888 553 23456777777 577788877544 44999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 126 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 157 (311)
T 4agu_A 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSD------------------------------------------------ 157 (311)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECC----------------------------------------------------
T ss_pred CCCChhhEEEcCCCCEEEeeCCCchhccCccc------------------------------------------------
Confidence 99999999999999999999998854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~e 264 (712)
......|+++|+|||.+.+ ..++.++|||||||++|+
T Consensus 158 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 195 (311)
T 4agu_A 158 ------------------------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAE 195 (311)
T ss_dssp --------------------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHH
Confidence 0001467999999999976 558999999999999999
Q ss_pred hhC---CCCCChhhHHHHH--hhcccC------------------CCc---------hhhhcCchhHHHHHHcCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMS--SLRHRV------------------LPP---------QLLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~--~~~~~~------------------~~~---------~~~~~~~~~~~li~~~L~~dP~~ 312 (712)
|++ ||........... ...... .+. ......+...+|+.+||..||.+
T Consensus 196 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 275 (311)
T 4agu_A 196 LLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTE 275 (311)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTT
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhh
Confidence 998 6655433222111 110000 000 01122334558999999999999
Q ss_pred CCCHHHHhcCcCCCCCcC
Q 005147 313 RPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~~~ 330 (712)
|||+.++|+||||+....
T Consensus 276 Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 276 RLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp SCCHHHHHTSGGGTTCC-
T ss_pred cCCHHHHhcChHHHhccC
Confidence 999999999999998755
No 125
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97 E-value=8.7e-31 Score=278.22 Aligned_cols=211 Identities=15% Similarity=0.184 Sum_probs=153.5
Q ss_pred cceeeccC-CCCCccccccccccccc---ccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEA---AIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~---~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
+..++..+ +||||+++++ ++.... ....+++++|+. +++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 70 e~~~l~~l~~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 148 (326)
T 2x7f_A 70 EINMLKKYSHHRNIATYYG-AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148 (326)
T ss_dssp HHHHHHHHCCSTTBCCEEE-EEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhccCCCCeeeeee-EEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 33456666 8999999888 443322 134677788875 78999999542 34589999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+|+||||+||+++.++.++|+|||++........
T Consensus 149 ~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------- 184 (326)
T 2x7f_A 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-------------------------------------------- 184 (326)
T ss_dssp TCCCCCCSGGGEEECTTCCEEECCCTTTC---------------------------------------------------
T ss_pred CccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc--------------------------------------------
Confidence 999999999999999999999999998743211100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIY 256 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIw 256 (712)
......|++.|+|||++. +..++.++|||
T Consensus 185 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~ 218 (326)
T 2x7f_A 185 ----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW 218 (326)
T ss_dssp ----------------------------------------------------CCGGGCCHHHHC--------CCTTHHHH
T ss_pred ----------------------------------------------ccccccCCccccChhhhccccccCcCCCccchHH
Confidence 001146899999999997 45689999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||||++|+|++ ||........ ...+.....+...... .+...+||.+||..||.+|||+.++++||||+....
T Consensus 219 slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~ 295 (326)
T 2x7f_A 219 SLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN 295 (326)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHH-HHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence 99999999998 6654443322 2222222223222223 344559999999999999999999999999987653
No 126
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=9.9e-31 Score=276.46 Aligned_cols=215 Identities=15% Similarity=0.152 Sum_probs=157.9
Q ss_pred ccceeeccCCCCCcccccccccccc-----------cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-----------AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 95 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-----------~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l 95 (712)
++..+++.++||||+++++ ++... .....+++++|+.+++|.+++.+ ..+++.+++.++.||+.||
T Consensus 57 ~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l 133 (320)
T 2i6l_A 57 REIKIIRRLDHDNIVKVFE-ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLLRGL 133 (320)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeeEEEE-eccccccccccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHHHHH
Confidence 4566788899999999887 44222 23357889999988899999954 3489999999999999999
Q ss_pred HHhhhcCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 96 YAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 96 ~~lHs~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
+|||++||+||||||+||+++ .++.+||+|||++..........
T Consensus 134 ~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~----------------------------------- 178 (320)
T 2i6l_A 134 KYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHK----------------------------------- 178 (320)
T ss_dssp HHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC------------------------------------------
T ss_pred HHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccc-----------------------------------
Confidence 999999999999999999997 56789999999885432110000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCcc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCAS 253 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~s 253 (712)
.......++++|+|||.+.+ ..++.++
T Consensus 179 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 206 (320)
T 2i6l_A 179 ----------------------------------------------------GHLSEGLVTKWYRSPRLLLSPNNYTKAI 206 (320)
T ss_dssp -----------------------------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHH
T ss_pred ----------------------------------------------------cccccccccccccCcHHhcCcccCCchh
Confidence 00011457999999998866 5699999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCC---------------------------C-chh-hhcCchhHHH
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---------------------------P-PQL-LLKFPKEASF 301 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~---------------------------~-~~~-~~~~~~~~~l 301 (712)
|||||||++|||++ ||........ +..+..... + ... ....+...+|
T Consensus 207 Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (320)
T 2i6l_A 207 DMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDF 285 (320)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHH
T ss_pred hhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHH
Confidence 99999999999998 6655443222 222111100 0 001 1123455599
Q ss_pred HHHcCCCCCCCCCCHHHHhcCcCCCCCcCch
Q 005147 302 CLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~~ 332 (712)
|.+||..||.+|||+.++|+||||+....+.
T Consensus 286 i~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 286 LEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 9999999999999999999999999776544
No 127
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=9.4e-31 Score=281.17 Aligned_cols=221 Identities=16% Similarity=0.200 Sum_probs=160.0
Q ss_pred ccceeeccCCCCCcccccccccccc--cccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~--~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.+.||||+++++ ++... .....+++++|+.+++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 58 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~iv 134 (353)
T 2b9h_A 58 REIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVI 134 (353)
T ss_dssp HHHHHHHHCCCTTBCCEEE-ECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCcCCCcCCeee-eecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5667788999999999888 44322 123578999999889999999543 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.+||+|||++........... .
T Consensus 135 H~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~------------------------------~------------- 171 (353)
T 2b9h_A 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS------------------------------E------------- 171 (353)
T ss_dssp CSCCCGGGEEECTTCCEEECCCTTCEECC---------------------------------------------------
T ss_pred cCCCCHHHeEEcCCCcEEEEeccccccccccccccc------------------------------C-------------
Confidence 999999999999999999999999865432210000 0
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvll~ 263 (712)
. ...........||++|+|||++.+ ..++.++|||||||++|
T Consensus 172 -~------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ 214 (353)
T 2b9h_A 172 -P------------------------------------TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILA 214 (353)
T ss_dssp ---------------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred -c------------------------------------cccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHH
Confidence 0 000000112578999999998765 66999999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhc--cc-----------------------CCCc-----hhhhcCchhHHHHHHcCCCCC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLR--HR-----------------------VLPP-----QLLLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~--~~-----------------------~~~~-----~~~~~~~~~~~li~~~L~~dP 310 (712)
+|++ ||.............. .. ..+. ......+...+||.+||..||
T Consensus 215 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 294 (353)
T 2b9h_A 215 ELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294 (353)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSG
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCc
Confidence 9998 6655433222111100 00 0000 011233455599999999999
Q ss_pred CCCCCHHHHhcCcCCCCCcC
Q 005147 311 SGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+|||+.++|+||||+....
T Consensus 295 ~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 295 AKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp GGSCCHHHHHTSGGGTTTCC
T ss_pred ccCCCHHHHhcCccccccCC
Confidence 99999999999999987654
No 128
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=2.1e-31 Score=284.66 Aligned_cols=205 Identities=18% Similarity=0.261 Sum_probs=136.3
Q ss_pred eeccCCCCCcccccccccccc-cccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 31 ELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~-~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
.+..++||||+.+++ ++... .....+++++|+. |++|.+++... ...+++.+++.|+.||+.||.|||++||+|||
T Consensus 75 ~~~~~~h~~i~~~~~-~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~d 153 (336)
T 3fhr_A 75 HWQASGGPHIVCILD-VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD 153 (336)
T ss_dssp HHHHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHhcCCCChHHHHH-HHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 356689999999988 55332 2244577888875 88999999554 34699999999999999999999999999999
Q ss_pred CCCCceeecCC---CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 108 VRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 108 LkP~NIll~~~---~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|||+||+++.+ +.+||+|||++.......
T Consensus 154 lkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------ 185 (336)
T 3fhr_A 154 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNA------------------------------------------------ 185 (336)
T ss_dssp CSGGGEEESCSSTTCCEEECCCTTCEEC----------------------------------------------------
T ss_pred CCHHHEEEEecCCCceEEEeccccceeccccc------------------------------------------------
Confidence 99999999864 459999999884321110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....||+.|+|||++.+..++.++|||||||++|+
T Consensus 186 --------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~ 221 (336)
T 3fhr_A 186 --------------------------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 221 (336)
T ss_dssp --------------------------------------------------------------CHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHH
Confidence 001467999999999988889999999999999999
Q ss_pred hhC---CCCCChhhHH---HHHhhcc--cCCCc-hhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTR---TMSSLRH--RVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~---~~~~~~~--~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||........ ....+.. ...+. ......+...+||.+||..||.+|||+.++|+||||+..
T Consensus 222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 222 LLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 999 5543322111 0111111 11122 222334455699999999999999999999999999865
No 129
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97 E-value=1.1e-30 Score=282.39 Aligned_cols=204 Identities=18% Similarity=0.221 Sum_probs=155.1
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+ +||||+.+++ ++. ....+++++|+ .|++|.+++... ..+++..+..++.||+.||.|||++||+
T Consensus 148 ~E~~~l~~l~~hp~iv~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi~ 222 (365)
T 2y7j_A 148 RETHILRQVAGHPHIITLID-SYE---SSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNIV 222 (365)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEE---BSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEe---eCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344456666 8999999887 442 23457777777 588999999543 3489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.......
T Consensus 223 H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~------------------------------------------------ 254 (365)
T 2y7j_A 223 HRDLKPENILLDDNMQIRLSDFGFSCHLEPGE------------------------------------------------ 254 (365)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred cCCCCHHHEEECCCCCEEEEecCcccccCCCc------------------------------------------------
Confidence 99999999999999999999999874321110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC------CCCCCccchHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRL 258 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~sDIwSl 258 (712)
......||+.|+|||++.+ ..++.++|||||
T Consensus 255 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 291 (365)
T 2y7j_A 255 -------------------------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291 (365)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHH
T ss_pred -------------------------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHhH
Confidence 0011468999999999853 358899999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
||++|+|++ ||...... .....+...... +.+....+...+||.+||..||.+|||+.++|+||||+.
T Consensus 292 G~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 292 GVILFTLLAGSPPFWHRRQI-LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 999999999 66544332 333333333222 122233445669999999999999999999999999973
No 130
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=3e-30 Score=280.77 Aligned_cols=194 Identities=19% Similarity=0.246 Sum_probs=144.4
Q ss_pred CcccccccccccccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhh--hcCceeccCCCCceee
Q 005147 39 RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH--SQGIVVHNVRPSCFVM 115 (712)
Q Consensus 39 ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lH--s~gIvHrDLkP~NIll 115 (712)
+++.+++ ++. ....+++++|+.+++|.+++... ...+++..++.|+.||+.||.||| ..||+||||||+|||+
T Consensus 117 ~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll 192 (382)
T 2vx3_A 117 YIVHLKR-HFM---FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192 (382)
T ss_dssp GBCCEEE-EEE---ETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEE
T ss_pred eEEEeee-eec---cCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEE
Confidence 3677665 332 23578999999888999999443 345899999999999999999999 4799999999999999
Q ss_pred c--CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcc
Q 005147 116 S--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (712)
Q Consensus 116 ~--~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~ 193 (712)
+ ..+.+||+|||++...+..
T Consensus 193 ~~~~~~~~kL~DFG~a~~~~~~---------------------------------------------------------- 214 (382)
T 2vx3_A 193 CNPKRSAIKIVDFGSSCQLGQR---------------------------------------------------------- 214 (382)
T ss_dssp SSTTSCCEEECCCTTCEETTCC----------------------------------------------------------
T ss_pred ecCCCCcEEEEeccCceecccc----------------------------------------------------------
Confidence 5 4678999999988443211
Q ss_pred ccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC---CCC
Q 005147 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (712)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~---pf~ 270 (712)
.....||+.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 215 -----------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 215 -----------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp -----------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred -----------------------------------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 001468999999999999999999999999999999999 666
Q ss_pred CChhhHHHHHhhcc-cCCCchhhh--------------------------------------------------------
Q 005147 271 TGEEKTRTMSSLRH-RVLPPQLLL-------------------------------------------------------- 293 (712)
Q Consensus 271 ~~~~~~~~~~~~~~-~~~~~~~~~-------------------------------------------------------- 293 (712)
.............. +..+.....
T Consensus 260 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 339 (382)
T 2vx3_A 260 GANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGES 339 (382)
T ss_dssp CSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCT
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccc
Confidence 54433222111111 111110000
Q ss_pred -----cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 294 -----KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 294 -----~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
..+...+||.+||+.||++|||+.|+|+||||+...
T Consensus 340 ~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 340 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp TCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred cccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 001345999999999999999999999999998753
No 131
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.97 E-value=9.1e-31 Score=272.52 Aligned_cols=204 Identities=14% Similarity=0.177 Sum_probs=157.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...+++++|+. +++|.+++...+ .+++.+++.++.||+.||.|||++||+|
T Consensus 63 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 137 (284)
T 2vgo_A 63 REIEIQSHLRHPNILRMYN-YFHD---RKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKVIH 137 (284)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhcCCCCCEeeEEE-EEEc---CCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 3455788899999999888 4432 34677888875 789999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......
T Consensus 138 ~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------------- 167 (284)
T 2vgo_A 138 RDIKPENLLMGYKGELKIADFGWSVHAPSL-------------------------------------------------- 167 (284)
T ss_dssp CCCSGGGEEECTTCCEEECCCTTCEECSSS--------------------------------------------------
T ss_pred cCCCHHHEEEcCCCCEEEecccccccCccc--------------------------------------------------
Confidence 999999999999999999999987322110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 168 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 205 (284)
T 2vgo_A 168 ------------------------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205 (284)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHH
Confidence 00014679999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
++ ||....... ....+...... ......+...++|.+||..||.+|||+.++++||||+...
T Consensus 206 ~~g~~pf~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 206 LVGMPPFDSPSHTE-THRRIVNVDLK-FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp HHSSCTTCCSSHHH-HHHHHHTTCCC-CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred HHCCCCCCCCCHhH-HHHHHhccccC-CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence 98 665443332 22222222111 1112234556999999999999999999999999998543
No 132
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.96 E-value=2.2e-30 Score=301.26 Aligned_cols=202 Identities=17% Similarity=0.241 Sum_probs=157.7
Q ss_pred eeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccC
Q 005147 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (712)
Q Consensus 31 ~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDL 108 (712)
+|..+ .||||+.+++ ++. ....++++||| .|++|.++|...+ .+++.+++.|+.||+.||+|||++|||||||
T Consensus 394 ~l~~~~~~~~i~~l~~-~~~---~~~~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDL 468 (674)
T 3pfq_A 394 VLALPGKPPFLTQLHS-CFQ---TMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468 (674)
T ss_dssp HHTCTTCCTTBCCEEE-ECB---CSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSEECCCC
T ss_pred HHHhccCCCeEEEEEE-EEE---eCCEEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeccC
Confidence 45544 7899999877 443 23457778877 5899999995543 4999999999999999999999999999999
Q ss_pred CCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 109 kP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
||+||||+.++.+||+|||+++......
T Consensus 469 Kp~NILl~~~g~ikL~DFGla~~~~~~~---------------------------------------------------- 496 (674)
T 3pfq_A 469 KLDNVMLDSEGHIKIADFGMCKENIWDG---------------------------------------------------- 496 (674)
T ss_dssp CSTTEEECSSSCEEECCCTTCEECCCTT----------------------------------------------------
T ss_pred ChhhEEEcCCCcEEEeecceeeccccCC----------------------------------------------------
Confidence 9999999999999999999885321110
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
......+||+.|+|||++.+..|+.++|||||||+||||++
T Consensus 497 --------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG 538 (674)
T 3pfq_A 497 --------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538 (674)
T ss_dssp --------------------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcC
Confidence 00011579999999999999999999999999999999998
Q ss_pred --CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCH-----HHHhcCcCCCCCc
Q 005147 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEPR 329 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~eiL~hp~~~~~~ 329 (712)
||...... ..+..+...... ......+...+||.+||..||.+||++ ++|++||||+...
T Consensus 539 ~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~ 605 (674)
T 3pfq_A 539 QAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 605 (674)
T ss_dssp SCSSCCSSHH-HHHHHHHSSCCC-CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred CCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence 77655443 344444433221 112234556699999999999999997 9999999999764
No 133
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.96 E-value=1.8e-30 Score=276.00 Aligned_cols=203 Identities=15% Similarity=0.105 Sum_probs=153.1
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.++..+++.++||||+++++ ++. ...+++++++ .+++|.+++......+++..++.|+.||+.||.|||++||+
T Consensus 63 ~~e~~~l~~l~h~~iv~~~~-~~~----~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 137 (325)
T 3kex_A 63 TDHMLAIGSLDHAHIVRLLG-LCP----GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137 (325)
T ss_dssp CHHHHHHHTCCCTTBCCEEE-EEC----BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCcCeEEE-EEc----CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34555788899999999988 553 2334555555 78999999976655699999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 138 H~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 171 (325)
T 3kex_A 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ---------------------------------------------- 171 (325)
T ss_dssp CSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC----------------------------------------------
T ss_pred CCccchheEEECCCCeEEECCCCcccccCccccc----------------------------------------------
Confidence 9999999999999999999999998554222000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.......|+..|+|||.+.+..++.++|||||||++|+
T Consensus 172 ------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 209 (325)
T 3kex_A 172 ------------------------------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWE 209 (325)
T ss_dssp ------------------------------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHH
Confidence 00011357889999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|++ ||..... ......+.....+.......+...+++.+||..||.+|||+.+++++
T Consensus 210 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 210 LMTFGAEPYAGLRL-AEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHTTSCCTTTTSCT-THHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHhCCCCCccccCH-HHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 997 5543322 22333333332222223344566699999999999999999999874
No 134
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.96 E-value=1.5e-30 Score=273.11 Aligned_cols=215 Identities=15% Similarity=0.207 Sum_probs=151.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-------CCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-------PKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-------~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..++..+.||||+++++ ++.. ...+++++|+ .|++|.+++.. ....+++.+++.++.||+.||.||
T Consensus 62 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 137 (303)
T 2vwi_A 62 KEIQAMSQCHHPNIVSYYT-SFVV---KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137 (303)
T ss_dssp ----CCCCCCCTTBCCEEE-EEES---SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCEeeEEE-EEee---cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 5566788899999999887 4432 2356777777 58999999842 234589999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+||||||+||+++.++.++++|||++....... ++
T Consensus 138 H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~------- 177 (303)
T 2vwi_A 138 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG---------------------------------DI------- 177 (303)
T ss_dssp HHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------------------------------------
T ss_pred HhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC---------------------------------Cc-------
Confidence 99999999999999999999999999999874332110 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYR 257 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwS 257 (712)
. .........|++.|+|||.+.+ ..++.++||||
T Consensus 178 -------------------------~--------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 212 (303)
T 2vwi_A 178 -------------------------T--------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWS 212 (303)
T ss_dssp -------------------------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHH
T ss_pred -------------------------c--------------------chhhhcccCCCccccCHHHhccccCCCchhhHHH
Confidence 0 0000011468999999999875 45899999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhcccCCC-------chhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-------PQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
|||++|+|++ ||.........+..+...... ...... .+...+++.+||..||.+|||+.++++||||+
T Consensus 213 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~ 292 (303)
T 2vwi_A 213 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292 (303)
T ss_dssp HHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-
T ss_pred HHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhh
Confidence 9999999998 666544433333332222111 011112 23455899999999999999999999999998
Q ss_pred CCcC
Q 005147 327 EPRD 330 (712)
Q Consensus 327 ~~~~ 330 (712)
....
T Consensus 293 ~~~~ 296 (303)
T 2vwi_A 293 KAKN 296 (303)
T ss_dssp ----
T ss_pred cCCC
Confidence 7543
No 135
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.96 E-value=1.4e-30 Score=281.94 Aligned_cols=202 Identities=20% Similarity=0.269 Sum_probs=148.5
Q ss_pred CCCCcccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhc-CceeccCCCCce
Q 005147 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVRPSCF 113 (712)
Q Consensus 36 ~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHrDLkP~NI 113 (712)
.||||+++++.+.........+++++++.|++|.+++.. ....+++.+++.|+.||+.||+|||++ ||+||||||+||
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NI 163 (373)
T 1q8y_A 84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV 163 (373)
T ss_dssp HHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGE
T ss_pred ccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHe
Confidence 389999999844333334457899999999999999944 344599999999999999999999998 999999999999
Q ss_pred eecC------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 114 VMSS------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 114 ll~~------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|++. .+.+||+|||++...+..
T Consensus 164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~~---------------------------------------------------- 191 (373)
T 1q8y_A 164 LMEIVDSPENLIQIKIADLGNACWYDEH---------------------------------------------------- 191 (373)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTBC----------------------------------------------------
T ss_pred EEeccCCCcCcceEEEcccccccccCCC----------------------------------------------------
Confidence 9953 347999999987432110
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
.....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 192 -----------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 230 (373)
T 1q8y_A 192 -----------------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230 (373)
T ss_dssp -----------------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHh
Confidence 001467999999999999999999999999999999999
Q ss_pred ---CCCCChh-----hHHHHHhhcc--cCCCchh---------------------------------------hhcCchh
Q 005147 268 ---PFSTGEE-----KTRTMSSLRH--RVLPPQL---------------------------------------LLKFPKE 298 (712)
Q Consensus 268 ---pf~~~~~-----~~~~~~~~~~--~~~~~~~---------------------------------------~~~~~~~ 298 (712)
||..... .......+.. +..|... ....+..
T Consensus 231 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (373)
T 1q8y_A 231 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310 (373)
T ss_dssp SSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHH
T ss_pred CCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHH
Confidence 5653321 0111111110 1111110 0112234
Q ss_pred HHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
.+||.+||..||.+|||+.|+|+||||+....
T Consensus 311 ~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 342 (373)
T 1q8y_A 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 342 (373)
T ss_dssp HHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred HHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence 48999999999999999999999999997643
No 136
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.96 E-value=1.3e-30 Score=294.04 Aligned_cols=207 Identities=16% Similarity=0.186 Sum_probs=158.9
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
+..+|+.++||||+.+++ ++.. ...+|++||+ .|++|.++|... ...+++..++.|+.||+.||+|||++||
T Consensus 235 E~~iL~~l~hp~Iv~l~~-~~~~---~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gI 310 (543)
T 3c4z_A 235 EKKILAKVHSRFIVSLAY-AFET---KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310 (543)
T ss_dssp HHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhcCCCCEeeEEE-EEee---CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCC
Confidence 455688899999999887 4432 3457777777 589999999543 3458999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+|||++.+|.+||+|||+++.......
T Consensus 311 vHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~---------------------------------------------- 344 (543)
T 3c4z_A 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT---------------------------------------------- 344 (543)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC----------------------------------------------
T ss_pred cccCCChHHEEEeCCCCEEEeecceeeeccCCCc----------------------------------------------
Confidence 9999999999999999999999999854321100
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 345 --------------------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvily 380 (543)
T 3c4z_A 345 --------------------------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380 (543)
T ss_dssp --------------------------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCccccChhhhcCCCCChHHhcCcchHHHH
Confidence 001147899999999999999999999999999999
Q ss_pred HhhC---CCCCChh---hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-----HHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eiL~hp~~~~~~ 329 (712)
||++ ||..... .......+..... .......+...+||.+||..||.+||+ +.+|++||||+...
T Consensus 381 elltG~~PF~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~ 456 (543)
T 3c4z_A 381 EMIAARGPFRARGEKVENKELKQRVLEQAV-TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456 (543)
T ss_dssp HHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred HHHhCCCCCCCCccchhHHHHHHHHhhccc-CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence 9999 6654321 1223333322211 111223455569999999999999996 58999999999753
No 137
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.96 E-value=5.3e-31 Score=284.73 Aligned_cols=208 Identities=10% Similarity=0.067 Sum_probs=151.5
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP 110 (712)
.+..+.||||+++++.+.........++++||+.|++|.+++......+++.+++.|+.||+.||+|||++||+||||||
T Consensus 101 ~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp 180 (364)
T 3op5_A 101 RTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKA 180 (364)
T ss_dssp HHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred HHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCH
Confidence 45678899999998844433333456788888889999999966656699999999999999999999999999999999
Q ss_pred Cceeec--CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccccc
Q 005147 111 SCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (712)
Q Consensus 111 ~NIll~--~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~ 188 (712)
+|||++ .++.+||+|||+++.......... +
T Consensus 181 ~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~------------------------------~----------------- 213 (364)
T 3op5_A 181 SNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKA------------------------------Y----------------- 213 (364)
T ss_dssp GGEEEESSCTTCEEECCCTTCEESSGGGCCCC------------------------------S-----------------
T ss_pred HHEEEecCCCCeEEEEECCcceecccCCcccc------------------------------c-----------------
Confidence 999999 889999999999854322100000 0
Q ss_pred CCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC-
Q 005147 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (712)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~- 267 (712)
.........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 214 ------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g 257 (364)
T 3op5_A 214 ------------------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG 257 (364)
T ss_dssp ------------------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred ------------------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence 0000011468999999999999999999999999999999999
Q ss_pred --CCCCChhhHHHHHhhcc---cCCCchh------hhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 --PFSTGEEKTRTMSSLRH---RVLPPQL------LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 --pf~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||............... ...+... ....+...+++..||..+|.+||++.+|++
T Consensus 258 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 258 HLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp CCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred CCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 66532111111111110 0111111 112344559999999999999999999876
No 138
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96 E-value=4.4e-31 Score=284.82 Aligned_cols=205 Identities=18% Similarity=0.167 Sum_probs=155.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-Cce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIv 104 (712)
++..+|..++||||+++++ ++.. ...+++++|+. |++|.+++.... .+++..+..|+.||+.||.|||++ ||+
T Consensus 80 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~i~ 154 (360)
T 3eqc_A 80 RELQVLHECNSPYIVGFYG-AFYS---DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIM 154 (360)
T ss_dssp HHHGGGGGCCCTTBCCEEE-EEEE---TTEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHCCCCCEEEEeE-EEEE---CCEEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 5566788899999999888 4432 34577888885 889999995543 489999999999999999999996 999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++|+|||++......
T Consensus 155 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------- 185 (360)
T 3eqc_A 155 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------- 185 (360)
T ss_dssp CSCCSGGGEEECTTCCEEECCCCCCHHHHHH-------------------------------------------------
T ss_pred cCCccHHHEEECCCCCEEEEECCCCcccccc-------------------------------------------------
Confidence 9999999999999999999999987321000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||++.+..++.++|||||||++|+
T Consensus 186 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~ 222 (360)
T 3eqc_A 186 -------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222 (360)
T ss_dssp -------------------------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHH
Confidence 0011468999999999999999999999999999999
Q ss_pred hhC---CCCCChhhHHHH-----------------------------------------HhhcccCCCchhhhc-CchhH
Q 005147 265 LFC---PFSTGEEKTRTM-----------------------------------------SSLRHRVLPPQLLLK-FPKEA 299 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~-~~~~~ 299 (712)
|++ ||.......... ..+.....+...... .+...
T Consensus 223 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (360)
T 3eqc_A 223 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 302 (360)
T ss_dssp HHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHH
T ss_pred HHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHH
Confidence 998 665443221110 111111111111112 23455
Q ss_pred HHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+||.+||..||.+|||+.++|+||||+..
T Consensus 303 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 303 DFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 99999999999999999999999999754
No 139
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96 E-value=1.3e-30 Score=274.28 Aligned_cols=205 Identities=17% Similarity=0.217 Sum_probs=159.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+. |++|.+++...+ .+++.++..++.||+.||.|||++||+|
T Consensus 55 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 129 (304)
T 2jam_A 55 NEIAVLKKIKHENIVTLED-IYES---TTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIVH 129 (304)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCeeehhh-hccc---CCEEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4556788899999999888 5532 34677788874 889999985433 4899999999999999999999999999
Q ss_pred ccCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||++ +.++.++++|||++......
T Consensus 130 ~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------- 162 (304)
T 2jam_A 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----------------------------------------------- 162 (304)
T ss_dssp CSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----------------------------------------------
T ss_pred cCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----------------------------------------------
Confidence 9999999999 67889999999987432110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 163 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 197 (304)
T 2jam_A 163 ---------------------------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197 (304)
T ss_dssp ---------------------------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHHHH
Confidence 00014589999999999998999999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCC--Cchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|+|++ ||...... .....+..... +... ....+...+||.+||..||.+|||+.++|+||||....
T Consensus 198 ~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 269 (304)
T 2jam_A 198 YILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT 269 (304)
T ss_dssp HHHHHSSCTTTTSCHH-HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence 99999 56544332 33333333322 2222 22334556999999999999999999999999998754
No 140
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.96 E-value=3.1e-30 Score=272.09 Aligned_cols=204 Identities=16% Similarity=0.209 Sum_probs=153.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+.+++ ++. ...+++++|+ .|++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 81 ~E~~~l~~l~h~~iv~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 155 (307)
T 3lb7_A 81 NEVAVLRKTRHVNILLFMG-YMT----KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155 (307)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEC----SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEc----cCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 4556788999999999888 442 2335666666 689999999766667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 156 ~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~----------------------------------------------- 188 (307)
T 3lb7_A 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS----------------------------------------------- 188 (307)
T ss_dssp SCCCSSSEEECTTSCEEECCCCSSCC------------------------------------------------------
T ss_pred CCCChhhEEEcCCCCEEEccCCCceeccccccc-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll 262 (712)
.......||+.|+|||++. +..++.++|||||||++
T Consensus 189 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il 227 (307)
T 3lb7_A 189 -----------------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVL 227 (307)
T ss_dssp ----------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHH
Confidence 0001146899999999986 55689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchh---h-hcCchhHHHHHHcCCCCCCCCCCHHHHhcCc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL---L-LKFPKEASFCLWLLHPEPSGRPKMGELLQSE 323 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp 323 (712)
|||++ ||............+.....++.+ . ...+...+|+.+||..+|++|||+.+++++.
T Consensus 228 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l 295 (307)
T 3lb7_A 228 YELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp HHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHH
T ss_pred HHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHH
Confidence 99998 776544443333333333332221 1 2234455999999999999999999999864
No 141
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.96 E-value=1.6e-30 Score=270.38 Aligned_cols=205 Identities=18% Similarity=0.249 Sum_probs=157.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++.+ ...+++++|+. +++|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 57 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 131 (283)
T 3bhy_A 57 REVNILREIRHPNIITLHD-IFEN---KTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRIAH 131 (283)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCeeehhh-eecC---CCeEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4555788899999999888 5532 34567777774 89999999543 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCC----cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 106 HNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 106 rDLkP~NIll~~~~----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|||||+||+++.++ .++++|||.+.......
T Consensus 132 ~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~--------------------------------------------- 166 (283)
T 3bhy_A 132 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN--------------------------------------------- 166 (283)
T ss_dssp SCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------------------------------------------
T ss_pred CCCChHHEEEecCCCCCCceEEEecccceeccCCC---------------------------------------------
Confidence 99999999998777 79999999874321110
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||.+.+..++.++|||||||+
T Consensus 167 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 200 (283)
T 3bhy_A 167 ----------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200 (283)
T ss_dssp ---------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhHHHH
Confidence 0001457999999999998899999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccC--CCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|+|++ ||...... .....+.... .+...... .+...+|+.+||..||.+|||+.++|+||||+..
T Consensus 201 l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 201 TYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHCCCCCCCcchH-HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 999998 66554333 2333332222 22222233 3445599999999999999999999999999864
No 142
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.96 E-value=2.8e-30 Score=276.86 Aligned_cols=208 Identities=18% Similarity=0.226 Sum_probs=160.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHh------hcCC-CCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQW------LDKP-KRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~------l~~~-~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.++ +... ...+++.+++.++.||+.||.||
T Consensus 92 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l 167 (348)
T 2pml_X 92 NELQIITDIKNEYCLTCEG-IITN---YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI 167 (348)
T ss_dssp HHHHHHTTCCCTTBCCCSE-EEES---SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcceEEE-EEee---CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 4556788899999999888 5533 3467778887 47799999 6432 45699999999999999999999
Q ss_pred hh-cCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 99 HS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 99 Hs-~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
|+ +||+||||||+||+++.++.++|+|||.+......
T Consensus 168 H~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------ 205 (348)
T 2pml_X 168 HNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK------------------------------------------ 205 (348)
T ss_dssp HHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT------------------------------------------
T ss_pred hccCCEeecCCChHhEEEcCCCcEEEeccccccccccc------------------------------------------
Confidence 99 99999999999999999999999999988432111
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCC-ccch
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSC-ASDI 255 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~-~sDI 255 (712)
......|++.|+|||.+.+. .++. ++||
T Consensus 206 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 235 (348)
T 2pml_X 206 --------------------------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235 (348)
T ss_dssp --------------------------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHH
T ss_pred --------------------------------------------------cccCCCCCcCccCchhhcCCCCCCcchhhH
Confidence 00114679999999999887 5666 9999
Q ss_pred HHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchh------------------hhcCchhHHHHHHcCCCCCCCCC
Q 005147 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL------------------LLKFPKEASFCLWLLHPEPSGRP 314 (712)
Q Consensus 256 wSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~li~~~L~~dP~~Rp 314 (712)
|||||++|+|++ ||............+.....+... ....+...+||.+||..||.+||
T Consensus 236 ~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 315 (348)
T 2pml_X 236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315 (348)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCC
Confidence 999999999998 666544433444444433221110 22234555999999999999999
Q ss_pred CHHHHhcCcCCCCCcC
Q 005147 315 KMGELLQSEFLNEPRD 330 (712)
Q Consensus 315 t~~eiL~hp~~~~~~~ 330 (712)
|+.++|+||||+....
T Consensus 316 s~~e~l~hp~f~~~~~ 331 (348)
T 2pml_X 316 TSEDALKHEWLADTNI 331 (348)
T ss_dssp CHHHHHTSGGGTTCCH
T ss_pred CHHHHhcCccccCCCH
Confidence 9999999999997643
No 143
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.96 E-value=1.4e-30 Score=272.35 Aligned_cols=210 Identities=19% Similarity=0.169 Sum_probs=154.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCC--CCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~--~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+++.++||||+++++ ++.. ...+++++|+. |++|.+++... ...+++..+..++.||+.||.|||++||
T Consensus 68 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 143 (295)
T 2clq_A 68 EEIALHKHLKHKNIVQYLG-SFSE---NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143 (295)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhCCCCCEeeEee-EEEe---CCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4556788899999999888 4432 34567777774 89999999543 2346788899999999999999999999
Q ss_pred eeccCCCCceeecC-CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 104 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 104 vHrDLkP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+|+||||+||+++. ++.++|+|||.+........
T Consensus 144 ~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 178 (295)
T 2clq_A 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--------------------------------------------- 178 (295)
T ss_dssp ECCCCSGGGEEEETTTCCEEECCTTTCEESCC------------------------------------------------
T ss_pred EccCCChhhEEEECCCCCEEEeecccccccCCCCC---------------------------------------------
Confidence 99999999999987 89999999998843321100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGV 260 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGv 260 (712)
......|++.|+|||++.+.. ++.++|||||||
T Consensus 179 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~ 213 (295)
T 2clq_A 179 ---------------------------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 213 (295)
T ss_dssp -----------------------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHHHHH
Confidence 000146799999999997654 889999999999
Q ss_pred HHHHhhC---CCCCChhhHHHHHhh-cccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 261 LLFELFC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 261 ll~eLl~---pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++|+|++ ||.........+... .....+.......+...+|+.+||..||++|||+.++|+||||+....
T Consensus 214 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 287 (295)
T 2clq_A 214 TIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287 (295)
T ss_dssp HHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred HHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence 9999999 554322222222221 112222222223445569999999999999999999999999987643
No 144
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.96 E-value=1.6e-30 Score=277.03 Aligned_cols=207 Identities=20% Similarity=0.251 Sum_probs=152.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++. ....+++++|+. +++|.+++.... .+++..+..|+.||+.||.|||++||+|
T Consensus 73 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH 147 (331)
T 4aaa_A 73 REIKLLKQLRHENLVNLLE-VCK---KKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNIIH 147 (331)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE---ETTEEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhhCCCCCEeeEEE-Eee---cCCEEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 4666788899999999888 553 334677888874 667777664443 4999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 148 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 179 (331)
T 4aaa_A 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGE------------------------------------------------ 179 (331)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTC--------------------------------------------------------
T ss_pred cCcChheEEEcCCCcEEEEeCCCceeecCCcc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-CCCCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvll~e 264 (712)
......|+++|+|||.+.+. .++.++|||||||++|+
T Consensus 180 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 217 (331)
T 4aaa_A 180 ------------------------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTE 217 (331)
T ss_dssp ----------------------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHH
Confidence 00014679999999999876 58999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcc-cCCCc----------------------------hhhhcCchhHHHHHHcCCCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRH-RVLPP----------------------------QLLLKFPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~-~~~~~----------------------------~~~~~~~~~~~li~~~L~~dP~~ 312 (712)
|++ ||............... ...++ ......+...+|+.+||..||.+
T Consensus 218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 297 (331)
T 4aaa_A 218 MFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK 297 (331)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred HHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCccc
Confidence 999 66554433222211110 00000 01112344559999999999999
Q ss_pred CCCHHHHhcCcCCCCC
Q 005147 313 RPKMGELLQSEFLNEP 328 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~ 328 (712)
|||+.|+|+||||+..
T Consensus 298 Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 298 RPFCAELLHHDFFQMD 313 (331)
T ss_dssp SCCGGGGGGSHHHHGG
T ss_pred CCCHHHHhcCchhccC
Confidence 9999999999999864
No 145
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.2e-30 Score=280.97 Aligned_cols=207 Identities=18% Similarity=0.209 Sum_probs=153.4
Q ss_pred cceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 28 DGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 28 ~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
+..+|.++ +||||+.+++ ++.. ...+++++|+ .|++|.+++.... .+++.+++.++.||+.||.|||++||+|
T Consensus 108 E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 182 (355)
T 1vzo_A 108 ERQVLEHIRQSPFLVTLHY-AFQT---ETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGIIY 182 (355)
T ss_dssp HHHHHHHHHTCTTBCCEEE-EEEE---TTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHccCCCceeEEEE-EEee---CceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 44456777 6999999887 4422 3457778887 5889999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++........
T Consensus 183 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~----------------------------------------------- 215 (355)
T 1vzo_A 183 RDIKLENILLDSNGHVVLTDFGLSKEFVADETE----------------------------------------------- 215 (355)
T ss_dssp CCCCGGGEEECTTSCEEESCSSEEEECCGGGGG-----------------------------------------------
T ss_pred CCCCHHHEEECCCCcEEEeeCCCCeecccCCCC-----------------------------------------------
Confidence 999999999999999999999988533111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC--CCCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvll~ 263 (712)
......||+.|+|||++.+. .++.++|||||||++|
T Consensus 216 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ 253 (355)
T 1vzo_A 216 ------------------------------------------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253 (355)
T ss_dssp ------------------------------------------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHH
Confidence 00114689999999999864 3789999999999999
Q ss_pred HhhC---CCCCCh---hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCC-----CHHHHhcCcCCCCCc
Q 005147 264 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (712)
Q Consensus 264 eLl~---pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eiL~hp~~~~~~ 329 (712)
||++ ||.... ........+... .++......+...+||.+||..||.+|| |+.++++||||....
T Consensus 254 ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~ 329 (355)
T 1vzo_A 254 ELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329 (355)
T ss_dssp HHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred HHHHCCCCCccCCccchHHHHHHHHhcc-CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence 9999 664321 111222222221 1222222334556999999999999999 999999999998753
No 146
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.96 E-value=6.1e-30 Score=268.88 Aligned_cols=212 Identities=15% Similarity=0.179 Sum_probs=158.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhc-CCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~-~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++.++ ......+++++|+..++|.+++. .....+++.++..++.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~h~~i~~~~~~~~--~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H 132 (305)
T 2wtk_C 55 KEIQLLRRLRHKNVIQLVDVLY--NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132 (305)
T ss_dssp HHHHHHTTCCCTTBCCEEEEEE--CC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCeeEEEEEEE--cCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4455788899999999988333 23345788899997777888873 33456999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+.........
T Consensus 133 ~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 165 (305)
T 2wtk_C 133 KDIKPGNLLLTTGGTLKISALGVAEALHPFAAD----------------------------------------------- 165 (305)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCEECCTTCSS-----------------------------------------------
T ss_pred cCCCcccEEEcCCCcEEeeccccccccCccccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC--CCCccchHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 263 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvll~ 263 (712)
.......|++.|+|||++.+.. ++.++|||||||++|
T Consensus 166 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~ 204 (305)
T 2wtk_C 166 -----------------------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLY 204 (305)
T ss_dssp -----------------------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHH
Confidence 0001145899999999997654 478999999999999
Q ss_pred HhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 264 eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
+|++ ||..... ......+.....+ ......+...+||.+||..||.+|||+.++++||||+....
T Consensus 205 ~l~~g~~p~~~~~~-~~~~~~i~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 205 NITTGLYPFEGDNI-YKLFENIGKGSYA-IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHSSCSCCCSSH-HHHHHHHHHCCCC-CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HHHhCCCCCCCchH-HHHHHHHhcCCCC-CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 9998 6654433 2333333333221 11123345569999999999999999999999999987644
No 147
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.3e-30 Score=274.33 Aligned_cols=204 Identities=15% Similarity=0.174 Sum_probs=151.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|..++||||+++++ ++.. .....+++++|+ .|++|.+++.... ..+++.+++.|+.||+.||+|||++||
T Consensus 56 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 133 (319)
T 4euu_A 56 REFEVLKKLNHKNIVKLFA-IEEE-TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133 (319)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC-TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCCcceEEE-Eeec-CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 5556788899999999988 4432 333466777777 4899999995432 238999999999999999999999999
Q ss_pred eeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 104 VVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 104 vHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||||||+||++ +..+.+||+|||+++......
T Consensus 134 vH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~------------------------------------------- 170 (319)
T 4euu_A 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------- 170 (319)
T ss_dssp ECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred ecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC-------------------------------------------
Confidence 999999999999 777889999999885432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc--------CCCCCC
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--------GAPVSC 251 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~~~ 251 (712)
......||+.|+|||++. +..++.
T Consensus 171 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~ 202 (319)
T 4euu_A 171 ------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGA 202 (319)
T ss_dssp ------------------------------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCT
T ss_pred ------------------------------------------------ceeecccCCCccCHHHhhhccccccccCCCCc
Confidence 000146899999999986 567999
Q ss_pred ccchHHHHHHHHHhhC---CCCCC---hhhHHHHHhhcccCCCc-----------------------hhhhcC-chhHHH
Q 005147 252 ASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPP-----------------------QLLLKF-PKEASF 301 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~---pf~~~---~~~~~~~~~~~~~~~~~-----------------------~~~~~~-~~~~~l 301 (712)
++|||||||++|||++ ||.+. ......+..+.....+. .+.... +...+|
T Consensus 203 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 282 (319)
T 4euu_A 203 TVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPV 282 (319)
T ss_dssp THHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHH
Confidence 9999999999999998 55432 22233333333222110 011111 233489
Q ss_pred HHHcCCCCCCCCCCHHHHhcCc
Q 005147 302 CLWLLHPEPSGRPKMGELLQSE 323 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~hp 323 (712)
+.+||..||++|||+.|+|+||
T Consensus 283 l~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 283 LANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHhccCChhhhccHHHhhhcc
Confidence 9999999999999999999987
No 148
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.96 E-value=2e-30 Score=279.24 Aligned_cols=205 Identities=20% Similarity=0.216 Sum_probs=154.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC---------------------------
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--------------------------- 77 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~--------------------------- 77 (712)
++..++..+ +||||+++++ ++.+ ....+++++|+ .|++|.+++.....
T Consensus 74 ~E~~~l~~l~~hpniv~~~~-~~~~--~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (359)
T 3vhe_A 74 SELKILIHIGHHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLK 150 (359)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS--TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------
T ss_pred HHHHHHHhhcCCcceeeeee-eeec--CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhh
Confidence 455567777 8899999888 5432 23446777777 58999999954322
Q ss_pred --------------------------------------CCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCC
Q 005147 78 --------------------------------------SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN 119 (712)
Q Consensus 78 --------------------------------------~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~ 119 (712)
.+++.+++.|+.||+.||.|||++||+||||||+||+++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~ 230 (359)
T 3vhe_A 151 RRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 230 (359)
T ss_dssp ---------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred ccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence 188999999999999999999999999999999999999999
Q ss_pred cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccc
Q 005147 120 HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVL 199 (712)
Q Consensus 120 ~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (712)
.+||+|||++.........
T Consensus 231 ~~kl~Dfg~a~~~~~~~~~------------------------------------------------------------- 249 (359)
T 3vhe_A 231 VVKICDFGLARDIYKDPDY------------------------------------------------------------- 249 (359)
T ss_dssp CEEECCCGGGSCTTSCTTC-------------------------------------------------------------
T ss_pred cEEEEeccceeeecccccc-------------------------------------------------------------
Confidence 9999999998543221000
Q ss_pred ccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC----CCCCChhh
Q 005147 200 VEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEK 275 (712)
Q Consensus 200 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~ 275 (712)
.......||+.|+|||++.+..++.++|||||||++|||++ ||......
T Consensus 250 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 302 (359)
T 3vhe_A 250 ---------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 302 (359)
T ss_dssp ---------------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ---------------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh
Confidence 00011457899999999998889999999999999999996 56544333
Q ss_pred HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 276 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
......+.....+.......+...+++.+||..||.+|||+.++++|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 303 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 33444444433333333344566699999999999999999999885
No 149
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=3.2e-30 Score=279.24 Aligned_cols=202 Identities=16% Similarity=0.165 Sum_probs=153.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~ 89 (712)
++..++..+ +||||+++++ ++.. ...+++++|+ .|++|.++|.... ..+++.+++.|+.
T Consensus 135 ~E~~~l~~l~~hpnIv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 210 (370)
T 2psq_A 135 SEMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 210 (370)
T ss_dssp HHHHHHHHSCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEeeEEE-EEcc---CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHH
Confidence 445567777 8999999888 5532 3456777777 5889999994322 3478999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 211 qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~------------------------------- 259 (370)
T 2psq_A 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY------------------------------- 259 (370)
T ss_dssp HHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTT-------------------------------
T ss_pred HHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccce-------------------------------
Confidence 9999999999999999999999999999999999999998543221000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......+++.|+|||++.+..+
T Consensus 260 ---------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~ 282 (370)
T 2psq_A 260 ---------------------------------------------------------KKTTNGRLPVKWMAPEALFDRVY 282 (370)
T ss_dssp ---------------------------------------------------------CTTTTTTSCGGGCCHHHHHTCCC
T ss_pred ---------------------------------------------------------ecccCCCcccceECHhHhcCCCC
Confidence 00001356889999999999999
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+.++|||||||++|||++ ||.... ....+..+.....+.......+...+++.+||..+|.+|||+.|+++
T Consensus 283 ~~~~DvwslG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 283 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999999999999997 554332 22333444444333333334455669999999999999999999987
No 150
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=2.6e-30 Score=271.74 Aligned_cols=207 Identities=18% Similarity=0.202 Sum_probs=158.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.. ...+++++|+ .|++|.+++.. ..+++.++..++.||+.||.|||++||+|
T Consensus 69 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 142 (303)
T 3a7i_A 69 QEITVLSQCDSPYVTKYYG-SYLK---DTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIH 142 (303)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE---TTEEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeEEEE-EEec---CCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 4555788899999999888 4432 3456777777 58899999954 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 143 ~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 174 (303)
T 3a7i_A 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQI------------------------------------------------ 174 (303)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECBTTBC------------------------------------------------
T ss_pred CCCChheEEECCCCCEEEeecccceecCcccc------------------------------------------------
Confidence 99999999999999999999998843321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 175 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 212 (303)
T 3a7i_A 175 ------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 212 (303)
T ss_dssp ------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 00114689999999999998999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... .....+.....+.......+...+|+.+||..||.+|||+.++++||||.....
T Consensus 213 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 213 ARGEPPHSELHPM-KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp HHSSCTTTTSCHH-HHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred ccCCCCCCCcCHH-HHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 99 55443322 222223233222222223344569999999999999999999999999975543
No 151
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=4.9e-30 Score=268.58 Aligned_cols=207 Identities=15% Similarity=0.084 Sum_probs=156.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++.+. ....+++++++.+++|.+++......+++.++..|+.||+.||.|||++||+||
T Consensus 71 ~E~~~l~~l~h~~iv~~~~-~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~ 148 (298)
T 3pls_A 71 REGLLMRGLNHPNVLALIG-IMLPP-EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148 (298)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EECCS-SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhCCCCCeeeEEE-EEecC-CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 4556788899999999988 54322 222344445557999999997766779999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+|++|||++..........
T Consensus 149 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~----------------------------------------------- 181 (298)
T 3pls_A 149 DLAARNCMLDESFTVKVADFGLARDILDREYYS----------------------------------------------- 181 (298)
T ss_dssp CCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC-----------------------------------------------
T ss_pred CCCcceEEEcCCCcEEeCcCCCcccccCCcccc-----------------------------------------------
Confidence 999999999999999999999985432210000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
........+++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 182 ---------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 222 (298)
T 3pls_A 182 ---------------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222 (298)
T ss_dssp ---------------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHh
Confidence 00001145788999999999999999999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ |++...........+.....++......+...+++.+||..||.+|||+.++++
T Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 223 TRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp HTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 8 444443333444444444333333333445669999999999999999999987
No 152
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.96 E-value=1.9e-30 Score=276.38 Aligned_cols=207 Identities=15% Similarity=0.141 Sum_probs=156.3
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.+..++..+ +||||+.+++ ++.. ...+++++|+.|++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 53 ~E~~~l~~l~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiH 128 (330)
T 2izr_A 53 LEYRFYKQLGSGDGIPQVYY-FGPC---GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 128 (330)
T ss_dssp HHHHHHHHHCSCTTSCCEEE-EEEE---TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHhhCCCCCCEEEE-EEec---CCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 344567777 9999999887 4432 3567888898899999999655556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCc-----EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCC
Q 005147 106 HNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (712)
Q Consensus 106 rDLkP~NIll~~~~~-----vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~ 180 (712)
|||||+||+++.++. +||+|||+++..........
T Consensus 129 rDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~---------------------------------------- 168 (330)
T 2izr_A 129 RDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH---------------------------------------- 168 (330)
T ss_dssp CCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB----------------------------------------
T ss_pred cCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc----------------------------------------
Confidence 999999999998887 99999999864322210000
Q ss_pred CcccccccCCCccccccccccccccccccccccccccccccCCCCcc-cccccccCccccCcccccCCCCCCccchHHHH
Q 005147 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM-KQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
.+. ......||+.|+|||++.+..++.++||||||
T Consensus 169 --------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 204 (330)
T 2izr_A 169 --------------------------------------------IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALG 204 (330)
T ss_dssp --------------------------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCcCCCccccChHHHcCCCCCchhHHHHHH
Confidence 000 00125789999999999999999999999999
Q ss_pred HHHHHhhC---CCCCCh--hhHHHHHhhcc---cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 260 VLLFELFC---PFSTGE--EKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 260 vll~eLl~---pf~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++|||++ ||.... .....+..+.. ...+..+....|...+++..||..+|.+||++.+|++
T Consensus 205 ~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 205 HMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 99999998 665422 22222222221 1222233344666779999999999999999999875
No 153
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.96 E-value=3.2e-30 Score=276.71 Aligned_cols=204 Identities=14% Similarity=0.182 Sum_probs=148.8
Q ss_pred cceeeccCCCCC------cccccccccccccccCceEEEEeeCCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 28 DGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 28 ~~~~l~~~~H~n------i~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
+..++..+.|+| ++.+++ ++ .....+++++|+.+++|.+++.. ....+++.+++.|+.||+.||+|||+
T Consensus 66 E~~~l~~l~~~~~~~~~~~~~~~~-~~---~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~ 141 (355)
T 2eu9_A 66 EINVLKKIKEKDKENKFLCVLMSD-WF---NFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141 (355)
T ss_dssp HHHHHHHHHHHCTTSCSCBCCEEE-EE---EETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhcCCCCceeEEEeee-ee---eeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344566666665 555444 33 23357899999988899888843 33459999999999999999999999
Q ss_pred cCceeccCCCCceee-------------------cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHH
Q 005147 101 QGIVVHNVRPSCFVM-------------------SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (712)
Q Consensus 101 ~gIvHrDLkP~NIll-------------------~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (712)
+||+||||||+|||+ +..+.+||+|||++...+..
T Consensus 142 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------------- 195 (355)
T 2eu9_A 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-------------------------- 195 (355)
T ss_dssp TTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC--------------------------
T ss_pred CCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc--------------------------
Confidence 999999999999999 45667788777776321110
Q ss_pred HhhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCc
Q 005147 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (712)
Q Consensus 162 ~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (712)
.....||+.|+||
T Consensus 196 -------------------------------------------------------------------~~~~~gt~~y~aP 208 (355)
T 2eu9_A 196 -------------------------------------------------------------------HTTIVATRHYRPP 208 (355)
T ss_dssp -------------------------------------------------------------------CCSSCSCGGGCCH
T ss_pred -------------------------------------------------------------------ccCCcCCCcccCC
Confidence 0114689999999
Q ss_pred ccccCCCCCCccchHHHHHHHHHhhC---CCCCChhhHH--HHHhhcccCCCchhhh-----------------------
Q 005147 242 EELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL----------------------- 293 (712)
Q Consensus 242 E~~~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~~~~--~~~~~~~~~~~~~~~~----------------------- 293 (712)
|++.+..++.++|||||||++|||++ ||........ .+..+. ...|..+..
T Consensus 209 E~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T 2eu9_A 209 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR 287 (355)
T ss_dssp HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHH
T ss_pred eeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchhc
Confidence 99999999999999999999999999 6655433221 111111 111211100
Q ss_pred ------------------cCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 294 ------------------KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 294 ------------------~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
..+...+||.+||..||.+|||+.|+|+||||+...
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 288 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341 (355)
T ss_dssp HHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred cccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence 012345899999999999999999999999999764
No 154
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=2.2e-30 Score=268.27 Aligned_cols=206 Identities=18% Similarity=0.262 Sum_probs=151.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.+.||||+++++ ++.. ...+++++|+ .|++|.+++.... .+++.++..++.||+.||.|||++||+|
T Consensus 60 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 134 (276)
T 2h6d_A 60 REIQNLKLFRHPHIIKLYQ-VIST---PTDFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVH 134 (276)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHhcCCCCCEeEEEE-EEec---CCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 4455688899999999888 4432 3457777777 4889999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
+||||+||+++.++.++++|||++........
T Consensus 135 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 166 (276)
T 2h6d_A 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF------------------------------------------------ 166 (276)
T ss_dssp CCCCGGGEEECTTSCEEECCCCGGGCCCC---------------------------------------------------
T ss_pred CCCChhhEEECCCCCEEEeecccccccCCCcc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFE 264 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvll~e 264 (712)
.....|++.|+|||.+.+..+ +.++|||||||++|+
T Consensus 167 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~ 203 (276)
T 2h6d_A 167 -------------------------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYA 203 (276)
T ss_dssp -----------------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHH
Confidence 001357999999999988775 689999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|++ ||..... ......+.....+. .....+...+++.+||+.||.+|||+.++++||||+....
T Consensus 204 l~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 204 LLCGTLPFDDEHV-PTLFKKIRGGVFYI-PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp HHHSSCSSCCSSH-HHHHHHHHHCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred HHhCCCCCCCCcH-HHHHHHhhcCcccC-chhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 998 6654332 23333333332211 1122345569999999999999999999999999987643
No 155
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.96 E-value=2.7e-30 Score=275.93 Aligned_cols=207 Identities=20% Similarity=0.231 Sum_probs=158.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++... ..+++.+++.|+.||+.||.|||++||+|
T Consensus 90 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 164 (335)
T 2owb_A 90 MEISIHRSLAHQHVVGFHG-FFED---NDFVFVVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIH 164 (335)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEec---CCeEEEEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Confidence 3555788899999999888 5532 3457777777 579999988543 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++........
T Consensus 165 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 196 (335)
T 2owb_A 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE------------------------------------------------ 196 (335)
T ss_dssp SCCCGGGEEECTTCCEEECCCTTCEECCSTTC------------------------------------------------
T ss_pred cCCCchhEEEcCCCCEEEeeccCceecccCcc------------------------------------------------
Confidence 99999999999999999999998854321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||++.+..++.++|||||||++|+|
T Consensus 197 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l 234 (335)
T 2owb_A 197 ------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 234 (335)
T ss_dssp ------------------------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 00114689999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||....... ....+...... ......+...+||.+||+.||.+|||+.++|+||||.....
T Consensus 235 ~~g~~pf~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~ 300 (335)
T 2owb_A 235 LVGKPPFETSCLKE-TYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI 300 (335)
T ss_dssp HHSSCTTCCSSHHH-HHHHHHHTCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHCcCCCCCCCHHH-HHHHHhcCCCC-CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence 99 665443322 22222222211 11122345569999999999999999999999999987543
No 156
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=1.6e-30 Score=269.63 Aligned_cols=211 Identities=17% Similarity=0.219 Sum_probs=160.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+++.++||||+++++ ++.+ .....+++++|+. |++|.+++.. ....+++.+++.|+.||+.||.|||++|
T Consensus 54 ~e~~~l~~l~h~~i~~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 131 (279)
T 2w5a_A 54 SEVNLLRELKHPNIVRYYD-RIID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131 (279)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE-GGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCCCeEEE-EEec-CCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence 4555688899999999887 3322 2334577777775 7899999943 2334899999999999999999999999
Q ss_pred -----ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 103 -----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 103 -----IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
|+||||||+||+++.++.+|++|||.+........
T Consensus 132 ~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------- 171 (279)
T 2w5a_A 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---------------------------------------- 171 (279)
T ss_dssp ------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CH----------------------------------------
T ss_pred CCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccc----------------------------------------
Confidence 99999999999999999999999998743321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
......|++.|+|||.+.+..++.++||||
T Consensus 172 --------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 201 (279)
T 2w5a_A 172 --------------------------------------------------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201 (279)
T ss_dssp --------------------------------------------------HHHHHHSCCTTCCHHHHHCC-CCHHHHHHH
T ss_pred --------------------------------------------------cccccCCCccccChHHhccCCCCchhhHHH
Confidence 001146799999999999988999999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
|||++|+|++ ||..... ......+.....+.......+...+++.+||..||.+|||+.++|+|+|+.....
T Consensus 202 lG~il~~l~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 202 LGCLLYELCALMPPFTAFSQ-KELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred HHHHHHHHHHCCCCCcccCH-HHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 9999999998 6654433 2333444444433332233455669999999999999999999999999987654
No 157
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.96 E-value=4e-30 Score=269.07 Aligned_cols=207 Identities=21% Similarity=0.233 Sum_probs=158.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++.... .+++.+++.++.||+.||+|||++||+|
T Consensus 64 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H 138 (294)
T 2rku_A 64 MEISIHRSLAHQHVVGFHG-FFED---NDFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIH 138 (294)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeeeee-eecc---CCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 3555788899999999888 5532 3456777777 5799999885433 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||.+........
T Consensus 139 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 170 (294)
T 2rku_A 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE------------------------------------------------ 170 (294)
T ss_dssp CCCCGGGEEECTTCCEEECCCTTCEECCSTTC------------------------------------------------
T ss_pred cCCChHhEEEcCCCCEEEEeccCceecccCcc------------------------------------------------
Confidence 99999999999999999999998844321100
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 171 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 208 (294)
T 2rku_A 171 ------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 208 (294)
T ss_dssp ------------------------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHH
Confidence 00114689999999999988899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
++ ||...... .....+.....+ ......+...+++.+||+.||.+|||+.++++||||.....
T Consensus 209 ~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 209 LVGKPPFETSCLK-ETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI 274 (294)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHTTCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HhCCCCCCCCCHH-HHHHHHhhccCC-CccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence 99 66544333 222223222211 11122345569999999999999999999999999986543
No 158
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.96 E-value=2.2e-30 Score=273.67 Aligned_cols=212 Identities=18% Similarity=0.265 Sum_probs=152.9
Q ss_pred ccceeeccCC--CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~--H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+. ||||+++++ ++. ....+++++|+.+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 75 ~E~~~l~~l~~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~iv 149 (313)
T 3cek_A 75 NEIAYLNKLQQHSDKIIRLYD-YEI---TDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIV 149 (313)
T ss_dssp HHHHHHHHHGGGCTTBCCEEE-EEE---CSSEEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhccccCCceEEEEE-Eee---cCCEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 3444566665 599999887 442 234688899999999999995543 489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++ ++.+||+|||++.........
T Consensus 150 H~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------- 182 (313)
T 3cek_A 150 HSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS---------------------------------------------- 182 (313)
T ss_dssp CCCCCGGGEEEE-TTEEEECCCSSSCC-----------------------------------------------------
T ss_pred ecCCCcccEEEE-CCeEEEeeccccccccCcccc----------------------------------------------
Confidence 999999999996 589999999988543221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-----------CCCCCcc
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSCAS 253 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----------~~~~~~s 253 (712)
.......|++.|+|||.+.+ ..++.++
T Consensus 183 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 220 (313)
T 3cek_A 183 ------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220 (313)
T ss_dssp -------------------------------------------------CCGGGCCHHHHTTCC----------CCCHHH
T ss_pred ------------------------------------------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchH
Confidence 00011468999999999875 4688999
Q ss_pred chHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 254 DIwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
|||||||++|+|++ ||.........+...........+... .+...+++.+||..||.+|||+.++|+||||+...
T Consensus 221 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred HHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 99999999999998 665443333333333322222222222 34456999999999999999999999999999765
Q ss_pred Cch
Q 005147 330 DSM 332 (712)
Q Consensus 330 ~~~ 332 (712)
.+.
T Consensus 301 ~~~ 303 (313)
T 3cek_A 301 HPV 303 (313)
T ss_dssp ---
T ss_pred Cch
Confidence 543
No 159
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.96 E-value=1.5e-30 Score=279.05 Aligned_cols=208 Identities=13% Similarity=0.105 Sum_probs=152.4
Q ss_pred eeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 30 ~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
..+..++||||+++++.+.........+++++|+.|++|.+++...+ .+++.+++.|+.||+.||+|||++||+|||||
T Consensus 100 ~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk 178 (345)
T 2v62_A 100 IERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIK 178 (345)
T ss_dssp HHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred HhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcC
Confidence 44677899999999883333223345788888888999999996544 59999999999999999999999999999999
Q ss_pred CCceeecCCC--cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccc
Q 005147 110 PSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (712)
Q Consensus 110 P~NIll~~~~--~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~ 187 (712)
|+||+++.++ .+||+|||+++......... .+
T Consensus 179 p~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~------------------------------~~---------------- 212 (345)
T 2v62_A 179 AANLLLGYKNPDQVYLADYGLSYRYCPNGNHK------------------------------QY---------------- 212 (345)
T ss_dssp GGGEEEESSSTTSEEECCCTTCEESSGGGCCC------------------------------CC----------------
T ss_pred HHHEEEccCCCCcEEEEeCCCceecccccccc------------------------------cc----------------
Confidence 9999999777 99999999985432110000 00
Q ss_pred cCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhhC
Q 005147 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (712)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl~ 267 (712)
.........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 213 -------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~ 255 (345)
T 2v62_A 213 -------------------------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC 255 (345)
T ss_dssp -------------------------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence 0000112578999999999999999999999999999999999
Q ss_pred ---CCCCChhhHH---HHHhhcccCCCchhh------hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 268 ---PFSTGEEKTR---TMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 268 ---pf~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||........ ..........+.... ...+...+++.+||..||.+|||+.+|++
T Consensus 256 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 256 GKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp SSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred CCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 5533211111 111111122333222 22335569999999999999999999877
No 160
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=4.8e-30 Score=270.87 Aligned_cols=200 Identities=17% Similarity=0.157 Sum_probs=147.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC--CCChhHHHHHHHHHHHHHHHhhhcC-
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQG- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~--~l~~~~~~~i~~qil~~l~~lHs~g- 102 (712)
++..+|+.++||||+++++ ++.. ...+++++|+ .|++|.+++..... .+++.+++.++.||+.||+|||++|
T Consensus 83 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~ 158 (309)
T 3p86_A 83 REVAIMKRLRHPNIVLFMG-AVTQ---PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158 (309)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEE---CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4566788899999999888 4432 2346777776 58899999965432 3899999999999999999999999
Q ss_pred -ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 103 -IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 103 -IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
|+||||||+||+++.++.+||+|||+++.......
T Consensus 159 ~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------------- 194 (309)
T 3p86_A 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL-------------------------------------------- 194 (309)
T ss_dssp CCCCTTCCGGGEEECTTCCEEECCCC------------------------------------------------------
T ss_pred CEECCCCChhhEEEeCCCcEEECCCCCCcccccccc--------------------------------------------
Confidence 99999999999999999999999998843211100
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl 261 (712)
......||+.|+|||++.+..++.++|||||||+
T Consensus 195 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 228 (309)
T 3p86_A 195 ----------------------------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228 (309)
T ss_dssp -----------------------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCCccccChhhhcCCCCCchhhHHHHHHH
Confidence 0011468999999999999999999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhc-ccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+|+|++ ||....... ....+. ............+...+||.+||..||.+|||+.++++
T Consensus 229 l~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 229 LWELATLQQPWGNLNPAQ-VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHHCCCTTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999 665544332 222222 22222222233455669999999999999999999987
No 161
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.96 E-value=1.4e-30 Score=277.07 Aligned_cols=202 Identities=15% Similarity=0.110 Sum_probs=154.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++.. ...+++++++.+++|.+++......+++..++.|+.||+.||.|||++||+||
T Consensus 66 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~ 141 (327)
T 3poz_A 66 DEAYVMASVDNPHVCRLLG-ICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141 (327)
T ss_dssp HHHHHHHHCCBTTBCCEEE-EEES---SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhCCCCCEeEEEE-EEec---CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCC
Confidence 4556788899999999988 5533 23456666668999999996655669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||+++..+.....
T Consensus 142 Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------------ 173 (327)
T 3poz_A 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKE------------------------------------------------ 173 (327)
T ss_dssp CCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------------------------------------------------
T ss_pred CCChheEEECCCCCEEEccCcceeEccCCccc------------------------------------------------
Confidence 99999999999999999999998543221000
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.......||+.|+|||.+.+..++.++|||||||++|||+
T Consensus 174 ----------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell 213 (327)
T 3poz_A 174 ----------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213 (327)
T ss_dssp ----------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHH
Confidence 0001135688999999999999999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.....++......+...+++.+||+.+|.+|||+.++++
T Consensus 214 t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 271 (327)
T 3poz_A 214 TFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 271 (327)
T ss_dssp TTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred hcCCCCccCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 7 55433322 233333333333333344556679999999999999999999987
No 162
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.96 E-value=5.1e-30 Score=268.55 Aligned_cols=207 Identities=16% Similarity=0.185 Sum_probs=156.1
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+ +||||+++++ ++. ....+++++|+ .+++|.+++... ..+++.++..++.||+.||.|||++||+
T Consensus 72 ~e~~~l~~l~~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 146 (298)
T 1phk_A 72 KEVDILRKVSGHPNIIQLKD-TYE---TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNIV 146 (298)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEE---CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCEeeeee-eec---cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 344456666 5999999888 543 23457777777 578999999543 3489999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
|+||||+||+++.++.++|+|||.+.......
T Consensus 147 H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------ 178 (298)
T 1phk_A 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGE------------------------------------------------ 178 (298)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred cCCCCcceEEEcCCCcEEEecccchhhcCCCc------------------------------------------------
Confidence 99999999999999999999999874321110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc------CCCCCCccchHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYRL 258 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~sDIwSl 258 (712)
......|++.|+|||++. ...++.++|||||
T Consensus 179 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 215 (298)
T 1phk_A 179 -------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215 (298)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccCHHHhccccccccccCCcccccHhH
Confidence 000146799999999985 4558999999999
Q ss_pred HHHHHHhhC---CCCCChhhHHHHHhhcccC--CC-chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcC
Q 005147 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (712)
Q Consensus 259 Gvll~eLl~---pf~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~ 330 (712)
||++|+|++ ||...... .....+.... .+ +......+...+|+.+||..||.+|||+.++|+||||+....
T Consensus 216 G~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 292 (298)
T 1phk_A 216 GVIMYTLLAGSPPFWHRKQM-LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV 292 (298)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred HHHHHHHHHCCCCCcCccHH-HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence 999999998 66544332 2222222222 12 222233445569999999999999999999999999997643
No 163
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.96 E-value=5.1e-30 Score=272.66 Aligned_cols=203 Identities=15% Similarity=0.150 Sum_probs=155.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++. ....+++++|+ .|++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 99 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 174 (325)
T 3kul_A 99 SEASIMGQFDHPNIIRLEG-VVT---RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVH 174 (325)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEC---GGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEE---eCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 4566788999999999888 553 23456777777 488999999766566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++......... .
T Consensus 175 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~--------------- 208 (325)
T 3kul_A 175 RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-------------------------------A--------------- 208 (325)
T ss_dssp SCCSGGGEEECTTCCEEECCCSSCEECC----C-------------------------------C---------------
T ss_pred CCCCcceEEECCCCCEEECCCCcccccccCccc-------------------------------e---------------
Confidence 999999999999999999999998543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+|+.|+|||++.+..++.++|||||||++|||
T Consensus 209 -----------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el 247 (325)
T 3kul_A 209 -----------------------------------------YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247 (325)
T ss_dssp -----------------------------------------EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHH
Confidence 000013467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++
T Consensus 248 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 248 LAYGERPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HTTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HcCCCCCcccCCHH-HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 97 55444333 334444444333333334455669999999999999999999987
No 164
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=3.8e-30 Score=265.63 Aligned_cols=202 Identities=14% Similarity=0.174 Sum_probs=156.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++.+ ...+++++|+ .|++|.+++......+++..+..++.||+.||.|||++||+|
T Consensus 54 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H 129 (269)
T 4hcu_A 54 EEAEVMMKLSHPKLVQLYG-VCLE---QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129 (269)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS---SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec---CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4556788899999999888 5532 3457777777 588999999766666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 130 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 162 (269)
T 4hcu_A 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT----------------------------------------------- 162 (269)
T ss_dssp SCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-----------------------------------------------
T ss_pred CCcchheEEEcCCCCEEeccccccccccccccc-----------------------------------------------
Confidence 999999999999999999999988433211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 163 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 200 (269)
T 4hcu_A 163 ------------------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200 (269)
T ss_dssp ------------------------------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHH
Confidence 00013467889999999988899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||..... ......+.....+.......+...+++.+||..+|.+|||+.++++|
T Consensus 201 l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 201 FSEGKIPYENRSN-SEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HTTSCCTTTTCCH-HHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcCCCCCCCCCCH-HHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 97 5544333 33444444443333223334556699999999999999999999884
No 165
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.96 E-value=3.1e-30 Score=274.61 Aligned_cols=202 Identities=15% Similarity=0.104 Sum_probs=152.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..+++.++||||+++++ ++.. ...+++++++.+++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 66 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 141 (327)
T 3lzb_A 66 DEAYVMASVDNPHVCRLLG-ICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141 (327)
T ss_dssp HHHHHHTTCCBTTBCCCCE-EEES---SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHhCCCCCeeEEEE-EEec---CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCC
Confidence 4556788999999999988 5533 23456666668999999996655669999999999999999999999999999
Q ss_pred cCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 107 DLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
||||+||+++.++.+||+|||++...+..... .
T Consensus 142 Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~--------------------------------~--------------- 174 (327)
T 3lzb_A 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--------------------------------Y--------------- 174 (327)
T ss_dssp CCCGGGEEEEETTEEEECCTTC----------------------------------------------------------
T ss_pred CCCHHHEEEcCCCCEEEccCcceeEccCcccc--------------------------------c---------------
Confidence 99999999999999999999998543222000 0
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
......+++.|+|||.+.+..++.++|||||||++|||+
T Consensus 175 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell 213 (327)
T 3lzb_A 175 -----------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213 (327)
T ss_dssp ----------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHH
Confidence 000134688999999999999999999999999999999
Q ss_pred C----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+ ||...... .....+.....++......+...+++.+||..||.+|||+.++++
T Consensus 214 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 214 TFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp TTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 7 55443322 233333333333333344556679999999999999999999987
No 166
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.96 E-value=6.4e-30 Score=267.93 Aligned_cols=205 Identities=16% Similarity=0.143 Sum_probs=152.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ....+++++|+ .+++|.+++......+++.++..|+.||+.||.|||++||+|
T Consensus 75 ~E~~~l~~l~h~~iv~~~~-~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H 151 (298)
T 3f66_A 75 TEGIIMKDFSHPNVLSLLG-ICLR--SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 151 (298)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EECC--SSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeeee-EEEc--CCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4556788899999999988 4322 22345666666 588999999776667899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||++..........
T Consensus 152 ~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~---------------------------------------------- 185 (298)
T 3f66_A 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS---------------------------------------------- 185 (298)
T ss_dssp SCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCB----------------------------------------------
T ss_pred CCCchheEEECCCCCEEECcccccccccccchhc----------------------------------------------
Confidence 9999999999999999999999985432210000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 186 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 225 (298)
T 3f66_A 186 ----------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 225 (298)
T ss_dssp ----------------------------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHH
Confidence 0000114578899999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....+.......+...+++.+||..+|.+|||+.++++
T Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 226 MTRGAPPYPDVNT-FDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HTTSCCSSTTSCT-TTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCccCCH-HHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 98 3333222 2223333332222222223344569999999999999999999987
No 167
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.96 E-value=1.2e-29 Score=261.39 Aligned_cols=198 Identities=17% Similarity=0.167 Sum_probs=152.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcC--
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG-- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~g-- 102 (712)
++..++..++||||+++++ ++.+.. ...+++++|+ .|++|.+++.... ..+++.+++.|+.||+.||.|||++|
T Consensus 56 ~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~ 133 (271)
T 3kmu_A 56 EECPRLRIFSHPNVLPVLG-ACQSPP-APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPL 133 (271)
T ss_dssp HHGGGGCCCSCTTEECEEE-EECTTT-SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHhcCCCchhheEE-EEccCC-CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5566788999999999988 553332 3456666666 5889999995543 35899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.++++||++......
T Consensus 134 i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~------------------------------------------------ 165 (271)
T 3kmu_A 134 IPRHALNSRSVMIDEDMTARISMADVKFSFQS------------------------------------------------ 165 (271)
T ss_dssp CTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC------------------------------------------------
T ss_pred eecCCCccceEEEcCCcceeEEeccceeeecc------------------------------------------------
Confidence 99999999999999999999988876521100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC---ccchHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC---ASDIYRLG 259 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~---~sDIwSlG 259 (712)
....||+.|+|||.+.+..++. ++||||||
T Consensus 166 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG 198 (271)
T 3kmu_A 166 -----------------------------------------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA 198 (271)
T ss_dssp -----------------------------------------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHH
T ss_pred -----------------------------------------------cCccCCccccChhhhccCCCCCCCchhhHHHHH
Confidence 0135799999999998766544 79999999
Q ss_pred HHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 260 vll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++|||++ ||..................+.......+...+++.+||+.||.+|||+.++++
T Consensus 199 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999998 666555444333333333333333334455669999999999999999999986
No 168
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=4.3e-30 Score=278.39 Aligned_cols=205 Identities=16% Similarity=0.154 Sum_probs=147.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ....+++++|+ .+++|.++++.....+++.+++.++.||+.||.|||++||+|
T Consensus 139 ~E~~il~~l~hpnIv~~~~-~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 215 (373)
T 3c1x_A 139 TEGIIMKDFSHPNVLSLLG-ICLR--SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 215 (373)
T ss_dssp HHHTTSTTCCCTTBCCCCE-EECC--CSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCcceEEE-EEEc--CCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 4556788999999999988 4322 22345666666 688999999776667899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++.........
T Consensus 216 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~---------------------------------------------- 249 (373)
T 3c1x_A 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS---------------------------------------------- 249 (373)
T ss_dssp SCCCGGGEEECTTCCEEECCC-----------------------------------------------------------
T ss_pred CccchheEEECCCCCEEEeecccccccccccccc----------------------------------------------
Confidence 9999999999999999999999985432210000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
........+++.|+|||.+.+..++.++|||||||++|||
T Consensus 250 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 289 (373)
T 3c1x_A 250 ----------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 289 (373)
T ss_dssp ------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 0000113568899999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 290 lt~~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 290 MTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp HTTSCCSCTTSCSS-CHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 98 44433222 222233333222222223345569999999999999999999987
No 169
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.96 E-value=2.8e-30 Score=285.75 Aligned_cols=210 Identities=16% Similarity=0.221 Sum_probs=144.7
Q ss_pred ccceeecc-CCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCC------CChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS------VDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~-~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~------l~~~~~~~i~~qil~~l~~lH 99 (712)
++..+|.. .+||||+++++ ++ .....+++++|+++++|.+++...... .++.+++.|+.||+.||+|||
T Consensus 57 ~E~~~l~~l~~HpnIv~~~~-~~---~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 132 (434)
T 2rio_A 57 MEIKLLTESDDHPNVIRYYC-SE---TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132 (434)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EE---ECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCcCeEEE-EE---ecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH
Confidence 34445655 48999999877 44 234568899999888999999554321 244567889999999999999
Q ss_pred hcCceeccCCCCceeecCC-------------CcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhc
Q 005147 100 SQGIVVHNVRPSCFVMSSF-------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 166 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~-------------~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (712)
++||+||||||+|||++.. +.+||+|||+++........
T Consensus 133 ~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~---------------------------- 184 (434)
T 2rio_A 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS---------------------------- 184 (434)
T ss_dssp HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------------------------
T ss_pred HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCcc----------------------------
Confidence 9999999999999999754 37999999988543221000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC
Q 005147 167 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 246 (712)
Q Consensus 167 ~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 246 (712)
+ ........||+.|+|||++.+
T Consensus 185 ----~------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~ 206 (434)
T 2rio_A 185 ----F------------------------------------------------------RTNLNNPSGTSGWRAPELLEE 206 (434)
T ss_dssp --------------------------------------------------------------------CCTTSCHHHHSC
T ss_pred ----c------------------------------------------------------eeeecCCCCCCCccCHHHhcc
Confidence 0 000011468999999999976
Q ss_pred -------CCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchh-----hhcCchhHHHHHHcCCCCC
Q 005147 247 -------APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQL-----LLKFPKEASFCLWLLHPEP 310 (712)
Q Consensus 247 -------~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP 310 (712)
..++.++|||||||++|||++ ||........ ..+......+.. ....+...+||.+||+.||
T Consensus 207 ~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 284 (434)
T 2rio_A 207 SNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP 284 (434)
T ss_dssp CCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSG
T ss_pred ccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HHhcCCCCcccccccccccchHHHHHHHHHHhhCCh
Confidence 568999999999999999997 5543322211 111111111111 1112445699999999999
Q ss_pred CCCCCHHHHhcCcCCCCC
Q 005147 311 SGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 311 ~~Rpt~~eiL~hp~~~~~ 328 (712)
.+|||+.++++||||...
T Consensus 285 ~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 285 LKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp GGSCCHHHHHTSGGGSCH
T ss_pred hhCCCHHHHHhCCccCCc
Confidence 999999999999999753
No 170
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.96 E-value=9.9e-31 Score=275.93 Aligned_cols=212 Identities=14% Similarity=0.139 Sum_probs=150.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++.++..|+.||+.||+|||++||+|
T Consensus 56 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 131 (310)
T 3s95_A 56 KEVKVMRCLEHPNVLKFIG-VLYK---DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131 (310)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCcCcccEEE-EEec---CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4556788899999999888 4432 3456777777 588999999765566999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++........... .. ..
T Consensus 132 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-----------------------------~~--~~---------- 170 (310)
T 3s95_A 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE-----------------------------GL--RS---------- 170 (310)
T ss_dssp SCCSTTSEEECTTSCEEECCCTTCEECC----------------------------------------------------
T ss_pred CCCCcCeEEECCCCCEEEeecccceeccccccccc-----------------------------cc--cc----------
Confidence 99999999999999999999999865432210000 00 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.............||+.|+|||.+.+..++.++|||||||++|||
T Consensus 171 -----------------------------------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el 215 (310)
T 3s95_A 171 -----------------------------------LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215 (310)
T ss_dssp --------------------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------ccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 000000001125789999999999999999999999999999999
Q ss_pred hC---CCCCChhhHH----HHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC---PFSTGEEKTR----TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||........ ..........+ ....+...+++.+||..||.+|||+.++++
T Consensus 216 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 216 IGRVNADPDYLPRTMDFGLNVRGFLDRYCP---PNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHTCCSSTTTSCBCTTSSBCHHHHHHHTCC---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hcCCCCCcchhhhHHHHhhhhhccccccCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 98 3332111000 00000111111 122345568999999999999999999987
No 171
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.96 E-value=1.9e-30 Score=271.62 Aligned_cols=206 Identities=18% Similarity=0.141 Sum_probs=151.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. .....+++++|+ .+++|.+++......+++.++..++.||+.||+|||++||+|
T Consensus 60 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 137 (295)
T 3ugc_A 60 REIEILKSLQHDNIVKYKG-VCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137 (295)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECH-HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec-CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5666789999999999888 4322 233456777777 489999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++......... +
T Consensus 138 ~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 171 (295)
T 3ugc_A 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEF--------------------------------F-------------- 171 (295)
T ss_dssp SCCSGGGEEEEETTEEEECCCCSCC-------------------------------------------------------
T ss_pred CCCCHhhEEEcCCCeEEEccCcccccccCCcce--------------------------------e--------------
Confidence 999999999999999999999998543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||.+.+..++.++|||||||++|||
T Consensus 172 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 210 (295)
T 3ugc_A 172 -----------------------------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210 (295)
T ss_dssp ---------------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHH
Confidence 000013467889999999999999999999999999999
Q ss_pred hC---CCCCChhh---------------HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC---PFSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ |+...... ......+.....++......+...+++.+||..||.+|||+.++++
T Consensus 211 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 211 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99 33221111 0111222222222222233445669999999999999999999986
No 172
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.96 E-value=3e-30 Score=268.27 Aligned_cols=200 Identities=19% Similarity=0.172 Sum_probs=146.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++. ...+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 65 ~e~~~l~~l~h~~iv~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 139 (281)
T 1mp8_A 65 QEALTMRQFDHPHIVKLIG-VIT----ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 139 (281)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEC----SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCccceEEE-EEc----cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4556788899999999887 442 2345667776 588999999655556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.........
T Consensus 140 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 172 (281)
T 1mp8_A 140 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----------------------------------------------- 172 (281)
T ss_dssp SCCSGGGEEEEETTEEEECC------------------------------------------------------------
T ss_pred ccccHHHEEECCCCCEEECccccccccCccccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|||
T Consensus 173 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 210 (281)
T 1mp8_A 173 ------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 210 (281)
T ss_dssp ------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHH
Confidence 00013467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++......+...+++.+||..||.+|||+.++++
T Consensus 211 l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 211 LMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp HTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhcCCCCCCcCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 85 56543332 233333333333333334455669999999999999999999886
No 173
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.96 E-value=2.7e-30 Score=271.23 Aligned_cols=206 Identities=17% Similarity=0.135 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+++++ ++... ....+++++|+ .+++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 72 ~E~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 149 (302)
T 4e5w_A 72 KEIEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVH 149 (302)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCeeeeee-EEecC-CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 4566788899999999888 44332 23456777777 588999999555556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......... +
T Consensus 150 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 183 (302)
T 4e5w_A 150 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEY--------------------------------Y-------------- 183 (302)
T ss_dssp SCCSGGGEEEEETTEEEECCCTTCEECCTTCCE--------------------------------E--------------
T ss_pred CCCchheEEEcCCCCEEECcccccccccCCCcc--------------------------------e--------------
Confidence 999999999999999999999988543222000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......||..|+|||.+.+..++.++|||||||++|+|
T Consensus 184 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 222 (302)
T 4e5w_A 184 -----------------------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222 (302)
T ss_dssp -----------------------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHH
Confidence 000114578899999999888899999999999999999
Q ss_pred hCCCCCC-----------------hhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FCPFSTG-----------------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~pf~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+++..+. .........+......+......+...+|+.+||..||.+|||+.++++
T Consensus 223 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 223 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9933221 1222222333333333322333455669999999999999999999986
No 174
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.96 E-value=2.8e-30 Score=268.29 Aligned_cols=205 Identities=22% Similarity=0.306 Sum_probs=158.2
Q ss_pred ccceeeccCCCCCcccccccccccc-------------cccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE-------------AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQI 91 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~-------------~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qi 91 (712)
++..++..+.||||+++++ ++... .....+++++|+ .+++|.+++.. ....+++..++.++.||
T Consensus 53 ~e~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi 131 (284)
T 2a19_B 53 REVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131 (284)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEee-eEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHH
Confidence 4555788899999999887 44321 123357788887 57799999943 33458999999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 132 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------- 176 (284)
T 2a19_B 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG----------------------------------- 176 (284)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS-----------------------------------
T ss_pred HHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc-----------------------------------
Confidence 999999999999999999999999999999999999874432110
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
......|++.|+|||.+.+..++.
T Consensus 177 --------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ 200 (284)
T 2a19_B 177 --------------------------------------------------------KRTRSKGTLRYMSPEQISSQDYGK 200 (284)
T ss_dssp --------------------------------------------------------CCCCCCSCCTTSCHHHHHCSCCCT
T ss_pred --------------------------------------------------------cccccCCcccccChhhhccCCCcc
Confidence 000135799999999999989999
Q ss_pred ccchHHHHHHHHHhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCC
Q 005147 252 ASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~ 326 (712)
++|||||||++|+|+++..+..........+.....+.. ..+...+++.+||..||.+|||+.+++++.+.-
T Consensus 201 ~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 201 EVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhccccccc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 999999999999999955544444444444444443322 223455899999999999999999999987544
No 175
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.96 E-value=5e-30 Score=271.09 Aligned_cols=203 Identities=16% Similarity=0.182 Sum_probs=150.6
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-CceeccCC
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVR 109 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvHrDLk 109 (712)
++..++||||+++++ ++.. ...+++++|+.+..+..++......+++..+..++.||+.||.|||++ ||+|||||
T Consensus 77 ~~~~~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlk 152 (318)
T 2dyl_A 77 VLKSHDCPYIVQCFG-TFIT---NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK 152 (318)
T ss_dssp HHHTTTCTTBCCEEE-EEEC---SSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred HHHhcCCCceeeEEE-EEec---CCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCC
Confidence 577789999999888 4432 346889999988777776644345599999999999999999999996 99999999
Q ss_pred CCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccC
Q 005147 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (712)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~ 189 (712)
|+||+++.++.+||+|||++.......
T Consensus 153 p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------------- 179 (318)
T 2dyl_A 153 PSNILLDERGQIKLCDFGISGRLVDDK----------------------------------------------------- 179 (318)
T ss_dssp GGGEEECTTSCEEECCCTTC------------------------------------------------------------
T ss_pred HHHEEECCCCCEEEEECCCchhccCCc-----------------------------------------------------
Confidence 999999999999999999874321110
Q ss_pred CCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc-----CCCCCCccchHHHHHHHHH
Q 005147 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvll~e 264 (712)
......|++.|+|||++. +..++.++|||||||++|+
T Consensus 180 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~ 221 (318)
T 2dyl_A 180 --------------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221 (318)
T ss_dssp ---------------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHH
T ss_pred --------------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHH
Confidence 000135799999999994 4558999999999999999
Q ss_pred hhC---CCCCChhhHHHHHhhcccCCCch--hhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 265 Ll~---pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|++ ||.........+..+.....+.. .....+...+|+.+||..||.+|||+.++++||||+..
T Consensus 222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 222 LATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 998 66553333344444433322211 11234556699999999999999999999999999743
No 176
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.96 E-value=9.5e-30 Score=269.92 Aligned_cols=214 Identities=12% Similarity=0.068 Sum_probs=147.7
Q ss_pred ccceeeccCCCCCccccccccccccccc---CceEEEEee-CCccHHHhhcC-----CCCCCChhHHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 97 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~---~~~~l~~e~-~g~sL~~~l~~-----~~~~l~~~~~~~i~~qil~~l~~ 97 (712)
++..+++.++||||+++++ ++...... ...++++++ .+++|.+++.. ....+++.+++.|+.||+.||.|
T Consensus 74 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~ 152 (323)
T 3qup_A 74 REAACMKEFDHPHVAKLVG-VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEY 152 (323)
T ss_dssp HHHHHHTTCCCTTBCCCCE-EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCceehhhc-eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHH
Confidence 4556788899999999998 44332222 123566665 68899999832 12248999999999999999999
Q ss_pred hhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 98 lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
||++||+||||||+||+++.++.+||+|||++.........
T Consensus 153 LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------------- 193 (323)
T 3qup_A 153 LSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY--------------------------------------- 193 (323)
T ss_dssp HHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------------------------------------------------
T ss_pred HHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccc---------------------------------------
Confidence 99999999999999999999999999999988543221000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
.......+++.|+|||.+.+..++.++||||
T Consensus 194 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 224 (323)
T 3qup_A 194 -------------------------------------------------RQGCASKLPVKWLALESLADNLYTVHSDVWA 224 (323)
T ss_dssp --------------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHH
T ss_pred -------------------------------------------------cccccccCcccccCchhhcCCCCCCccchhh
Confidence 0000134678899999999989999999999
Q ss_pred HHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCC-------HHHHhcCcCCC
Q 005147 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-------MGELLQSEFLN 326 (712)
Q Consensus 258 lGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-------~~eiL~hp~~~ 326 (712)
|||++|||++ ||...... .....+.....+.......+...+|+.+||..||.+||| ++++++|+|+.
T Consensus 225 lG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 225 FGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp HHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhCCCCCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 9999999988 45433332 333333333333333344456669999999999999999 77788899988
Q ss_pred CCcC
Q 005147 327 EPRD 330 (712)
Q Consensus 327 ~~~~ 330 (712)
....
T Consensus 304 ~~~~ 307 (323)
T 3qup_A 304 STSQ 307 (323)
T ss_dssp ----
T ss_pred CCCC
Confidence 7533
No 177
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=5.7e-30 Score=268.26 Aligned_cols=205 Identities=17% Similarity=0.269 Sum_probs=152.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+ .|++|.+++...+ .+++.+++.++.||+.||+|||++||+|
T Consensus 60 ~e~~~l~~l~hp~iv~~~~-~~~---~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H 134 (294)
T 4eqm_A 60 REVHNSSQLSHQNIVSMID-VDE---EDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMRIVH 134 (294)
T ss_dssp HHHHHHTTCCBTTBCCEEE-EEE---CSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCCceEEE-eee---eCCeEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5566788899999999888 442 33467777777 5889999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+|++|||++.........
T Consensus 135 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 167 (294)
T 4eqm_A 135 RDIKPQNILIDSNKTLKIFDFGIAKALSETSLT----------------------------------------------- 167 (294)
T ss_dssp CCCCGGGEEECTTSCEEECCCSSSTTC-----------------------------------------------------
T ss_pred CCCCHHHEEECCCCCEEEEeCCCcccccccccc-----------------------------------------------
Confidence 999999999999999999999988543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......||+.|+|||.+.+..++.++|||||||++|+|
T Consensus 168 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~l 205 (294)
T 4eqm_A 168 ------------------------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205 (294)
T ss_dssp -------------------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHH
Confidence 00114689999999999999999999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCCc--hhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
++ ||............+.....+. ...... +...+++.+||..||.+||+..+.+.++|.
T Consensus 206 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 206 LVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp HHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred HhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 98 7766555444444444333221 112223 344599999999999999955555555543
No 178
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.96 E-value=7.5e-30 Score=267.15 Aligned_cols=206 Identities=14% Similarity=0.070 Sum_probs=151.1
Q ss_pred ceeeccC-CCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceecc
Q 005147 29 GVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (712)
Q Consensus 29 ~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrD 107 (712)
..++..+ .|+|++.+++ ++ .....+++++|+.|++|.+++...+..+++.+++.|+.||+.||.|||++||+|||
T Consensus 56 ~~~~~~l~~~~~i~~~~~-~~---~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D 131 (298)
T 1csn_A 56 YRTYKLLAGCTGIPNVYY-FG---QEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRD 131 (298)
T ss_dssp HHHHHHTTTCTTCCCEEE-EE---EETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred HHHHHHHhcCCCCCeEEe-ec---CCCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 3355555 7899988777 44 23456788899889999999966555699999999999999999999999999999
Q ss_pred CCCCceeecCCCc-----EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 108 VRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 108 LkP~NIll~~~~~-----vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||+||+++.++. ++|+|||++........... .
T Consensus 132 lkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~----------- 170 (298)
T 1csn_A 132 IKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH------------------------------I----------- 170 (298)
T ss_dssp CCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB------------------------------C-----------
T ss_pred CCHHHEEeccCCCCCCCeEEEEECcccccccccccccc------------------------------c-----------
Confidence 9999999987765 99999999854422210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.........||+.|+|||.+.+..++.++|||||||++
T Consensus 171 ------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 208 (298)
T 1csn_A 171 ------------------------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF 208 (298)
T ss_dssp ------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHH
Confidence 00000125689999999999999999999999999999
Q ss_pred HHhhC---CCCCCh--hhHHHHHhhcc---cCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGE--EKTRTMSSLRH---RVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~--~~~~~~~~~~~---~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++ ||.... ........+.. ....+..... .+...+++.+||..||.+|||+.+|++
T Consensus 209 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 209 MYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 99999 665421 11122222211 1111222223 345559999999999999999999876
No 179
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=4.7e-30 Score=272.52 Aligned_cols=206 Identities=14% Similarity=0.082 Sum_probs=150.2
Q ss_pred eeccceeeccCCCCCccccccccccccc-ccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-
Q 005147 25 KHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 101 (712)
Q Consensus 25 ~~~~~~~l~~~~H~ni~~~~~~~~~~~~-~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~- 101 (712)
.+++..+|..++||||+++++ ++.... ....+++++|+. +++|.++++.. .+++.+++.|+.||+.||.|||++
T Consensus 65 ~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~ 141 (322)
T 3soc_A 65 NEYEVYSLPGMKHENILQFIG-AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDI 141 (322)
T ss_dssp HHHHHHTSTTCCCTTBCCEEE-EEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhcCCCCCchhhcc-eeccCCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 345666788999999999998 443332 244578888885 88999999553 389999999999999999999999
Q ss_pred ---------CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccc
Q 005147 102 ---------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (712)
Q Consensus 102 ---------gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg 172 (712)
||+||||||+||+++.++.+||+|||+++........
T Consensus 142 ~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~---------------------------------- 187 (322)
T 3soc_A 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA---------------------------------- 187 (322)
T ss_dssp EEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCC----------------------------------
T ss_pred cccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCc----------------------------------
Confidence 9999999999999999999999999998543211000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC-----
Q 005147 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----- 247 (712)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----- 247 (712)
.......||+.|+|||++.+.
T Consensus 188 ------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 213 (322)
T 3soc_A 188 ------------------------------------------------------GDTHGQVGTRRYMAPEVLEGAINFQR 213 (322)
T ss_dssp ------------------------------------------------------CCCTTCCCCGGGCCHHHHTTCCCCCH
T ss_pred ------------------------------------------------------cccccCccCccccCHhhcccccccCc
Confidence 000114689999999999873
Q ss_pred CCCCccchHHHHHHHHHhhC---CCCCCh---------------hhHHHHHhhcccCCCchhhhc------CchhHHHHH
Q 005147 248 PVSCASDIYRLGVLLFELFC---PFSTGE---------------EKTRTMSSLRHRVLPPQLLLK------FPKEASFCL 303 (712)
Q Consensus 248 ~~~~~sDIwSlGvll~eLl~---pf~~~~---------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~li~ 303 (712)
.++.++|||||||++|||++ ||.... ...............+.+... .+...+|+.
T Consensus 214 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 293 (322)
T 3soc_A 214 DAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIE 293 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHH
T ss_pred CCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHH
Confidence 36678999999999999999 554321 111111112222222211111 123559999
Q ss_pred HcCCCCCCCCCCHHHHhc
Q 005147 304 WLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 304 ~~L~~dP~~Rpt~~eiL~ 321 (712)
+||..||++|||+.++++
T Consensus 294 ~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 294 ECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHTCSSGGGSCCHHHHHH
T ss_pred HHccCChhhCcCHHHHHH
Confidence 999999999999999987
No 180
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.96 E-value=7.1e-30 Score=271.47 Aligned_cols=203 Identities=15% Similarity=0.139 Sum_probs=138.4
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcC----CCCCCChhHHHHHHHHHHHHHHHhhhc-Ccee
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 105 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~----~~~~l~~~~~~~i~~qil~~l~~lHs~-gIvH 105 (712)
+++.++||||+++++ ++.. ...+++++|+.+++|.+++.. ....+++..+..++.||+.||.|||++ ||+|
T Consensus 74 ~~~~~~h~niv~~~~-~~~~---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH 149 (327)
T 3aln_A 74 VMRSSDCPYIVQFYG-ALFR---EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149 (327)
T ss_dssp HHSSCCCTTBCCEEE-EEEC---SSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHcCCCCcEeeeee-EEEe---CCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeE
Confidence 677789999999888 4432 346789999988899988742 244589999999999999999999999 9999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++.......
T Consensus 150 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 180 (327)
T 3aln_A 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSI------------------------------------------------- 180 (327)
T ss_dssp SCCCGGGEEEETTTEEEECCCSSSCC------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEccCCCceeccccc-------------------------------------------------
Confidence 9999999999999999999999884431110
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc----cCCCCCCccchHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRLGVL 261 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~~sDIwSlGvl 261 (712)
......|++.|+|||.+ .+..++.++|||||||+
T Consensus 181 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 218 (327)
T 3aln_A 181 ------------------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218 (327)
T ss_dssp -------------------------------------------------------------------CCSHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence 00013579999999998 45568999999999999
Q ss_pred HHHhhC---CCCCChhhHHHHHhhcccCCCch---h-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---L-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 262 l~eLl~---pf~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
+|+|++ ||.........+..+.....+.. . ....+...+|+.+||..||.+|||+.++++||||...
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp HHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 999998 66544333223322222222211 1 1233455699999999999999999999999999754
No 181
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.96 E-value=4.2e-30 Score=278.06 Aligned_cols=206 Identities=14% Similarity=0.139 Sum_probs=153.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC------CCCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~------~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++... ...+++.+++.|+.||+.||+|||
T Consensus 123 ~E~~~l~~l~hpnIv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 198 (367)
T 3l9p_A 123 MEALIISKFNHQNIVRCIG-VSLQ---SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198 (367)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCeEEE-EEec---CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH
Confidence 4556788899999999888 5432 3345677777 589999999432 234899999999999999999999
Q ss_pred hcCceeccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 100 SQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
++||+||||||+|||++.++ .+||+|||+++...... ..
T Consensus 199 ~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~---------------------------------~~----- 240 (367)
T 3l9p_A 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG---------------------------------YY----- 240 (367)
T ss_dssp HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHS---------------------------------SC-----
T ss_pred hCCeeCCCCChhhEEEecCCCCceEEECCCcccccccccc---------------------------------cc-----
Confidence 99999999999999999555 49999999884210000 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
.......||+.|+|||++.+..++.++|||
T Consensus 241 --------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw 270 (367)
T 3l9p_A 241 --------------------------------------------------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270 (367)
T ss_dssp --------------------------------------------------TTCCGGGSCGGGCCHHHHHHCCCCHHHHHH
T ss_pred --------------------------------------------------ccCCCcCCcccEECHHHhcCCCCCcHHHHH
Confidence 000114678999999999988999999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||||++|||++ ||..... ......+.....+.......+...+|+.+||+.||.+|||+.+|+++.++
T Consensus 271 slG~il~ellt~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 271 SFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 99999999996 5544333 33444444433333223334456699999999999999999999997643
No 182
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=9.3e-30 Score=272.49 Aligned_cols=204 Identities=16% Similarity=0.129 Sum_probs=154.4
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC----------------------CCChh
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR----------------------SVDVY 82 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~----------------------~l~~~ 82 (712)
++..+|..+ +||||+++++ ++.. ...+++++|+ .|++|.+++..... .+++.
T Consensus 97 ~E~~~l~~l~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 172 (344)
T 1rjb_A 97 SELKMMTQLGSHENIVNLLG-ACTL---SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172 (344)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHH
T ss_pred HHHHHHHhhcCCCCeeeEEE-EEee---CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHH
Confidence 445567777 9999999888 5532 3456777777 58899999955432 37899
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
+++.|+.||+.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 173 ~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------------------- 227 (344)
T 1rjb_A 173 DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN------------------------- 227 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999999854321100
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
. .......|++.|+|||
T Consensus 228 --------~-------------------------------------------------------~~~~~~~~t~~y~aPE 244 (344)
T 1rjb_A 228 --------Y-------------------------------------------------------VVRGNARLPVKWMAPE 244 (344)
T ss_dssp --------S-------------------------------------------------------EEETTEEECGGGCCHH
T ss_pred --------c-------------------------------------------------------eeccCccCccCccCHH
Confidence 0 0001145688999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (712)
.+.+..++.++|||||||++|+|++ ||............+.....++......+...+|+.+||..||.+|||+.+
T Consensus 245 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 324 (344)
T 1rjb_A 245 SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPN 324 (344)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 9988889999999999999999997 565443333333334443333333334455669999999999999999999
Q ss_pred HhcC
Q 005147 319 LLQS 322 (712)
Q Consensus 319 iL~h 322 (712)
++++
T Consensus 325 l~~~ 328 (344)
T 1rjb_A 325 LTSF 328 (344)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9884
No 183
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.96 E-value=1.2e-29 Score=264.89 Aligned_cols=202 Identities=17% Similarity=0.249 Sum_probs=146.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..+.||||+.+++ ++ ....+++++++ .|++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 69 ~E~~~l~~l~h~~iv~~~~-~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H 143 (289)
T 3og7_A 69 NEVGVLRKTRHVNILLFMG-YS----TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143 (289)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EE----CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCcEEEEEe-ec----cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4556788999999999877 33 22345666665 689999999666667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++.........
T Consensus 144 ~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 176 (289)
T 3og7_A 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS----------------------------------------------- 176 (289)
T ss_dssp SCCCGGGEEEETTTEEEECCCC----------------------------------------------------------
T ss_pred ccCccceEEECCCCCEEEccceecccccccccc-----------------------------------------------
Confidence 999999999999999999999988432211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc---CCCCCCccchHHHHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 262 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvll 262 (712)
.......|++.|+|||.+. +..++.++|||||||++
T Consensus 177 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il 215 (289)
T 3og7_A 177 -----------------------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215 (289)
T ss_dssp ------------------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHH
Confidence 0001146899999999986 55689999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCCchh---h-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL---L-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||............+.....++.. . ...+...+|+.+||..+|.+|||+.++++
T Consensus 216 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 216 YELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99998 676544444444444443333322 2 22344569999999999999999999986
No 184
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.96 E-value=6.9e-30 Score=263.43 Aligned_cols=202 Identities=15% Similarity=0.161 Sum_probs=154.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++. ....+++++|+ .|++|.+++......+++.++..|+.||+.||.|||++||+|
T Consensus 52 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 127 (268)
T 3sxs_A 52 QEAQTMMKLSHPKLVKFYG-VCS---KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIH 127 (268)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC---SSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHhCCCCCEeeEEE-EEc---cCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4555788899999999888 553 33457777777 589999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 128 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~----------------------------------------------- 160 (268)
T 3sxs_A 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV----------------------------------------------- 160 (268)
T ss_dssp SSCSGGGEEECTTCCEEECCTTCEEECCTTCEE-----------------------------------------------
T ss_pred CCcCcceEEECCCCCEEEccCccceecchhhhh-----------------------------------------------
Confidence 999999999999999999999988543221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 161 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 198 (268)
T 3sxs_A 161 ------------------------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198 (268)
T ss_dssp ------------------------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHH
Confidence 00013467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... .....+.....+.......+...+++.+||..+|.+|||+.+++++
T Consensus 199 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 199 FSLGKMPYDLYTNS-EVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCccccChH-HHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 97 55544333 2333333332222222234456699999999999999999999984
No 185
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.96 E-value=9.2e-30 Score=268.81 Aligned_cols=205 Identities=20% Similarity=0.216 Sum_probs=154.2
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC---------------CCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR---------------SVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~---------------~l~~~~~~~i~~ 89 (712)
++..++..+ +||||+++++ ++.. ....+++++|+ .|++|.+++..... .+++.+++.++.
T Consensus 79 ~E~~~l~~l~~hp~iv~~~~-~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T 2xir_A 79 SELKILIHIGHHLNVVNLLG-ACTK--PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 155 (316)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECC--TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHH
T ss_pred HHHHHHHhcccCCCeeeEEE-EEec--CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHH
Confidence 445566777 7899999888 4432 23446777776 58899999955432 278999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.+|++|||++.........
T Consensus 156 qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------- 204 (316)
T 2xir_A 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY------------------------------- 204 (316)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS-------------------------------
T ss_pred HHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccc-------------------------------
Confidence 9999999999999999999999999999999999999998543221000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......|++.|+|||++.+..+
T Consensus 205 ---------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~ 227 (316)
T 2xir_A 205 ---------------------------------------------------------VRKGDARLPLKWMAPETIFDRVY 227 (316)
T ss_dssp ---------------------------------------------------------EEETTEEECGGGCCHHHHHHCCC
T ss_pred ---------------------------------------------------------eeccCCCcceeecCchhhccccc
Confidence 00011457889999999998889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|+|++ ||............+.....+.......+...+++.+||..||.+|||+.++++|
T Consensus 228 ~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999997 5554333333334443333333223344566699999999999999999999985
No 186
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.96 E-value=9.8e-30 Score=264.46 Aligned_cols=202 Identities=16% Similarity=0.205 Sum_probs=155.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++. ....+++++|+ .|++|.+++......+++.+++.|+.||+.||.|||++||+|
T Consensus 68 ~E~~~l~~l~h~~i~~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 143 (283)
T 3gen_A 68 EEAKVMMNLSHEKLVQLYG-VCT---KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 143 (283)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEC---SSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCEeeEEE-EEe---cCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccC
Confidence 4556788899999999888 553 23457788887 589999999765556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++.........
T Consensus 144 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 176 (283)
T 3gen_A 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT----------------------------------------------- 176 (283)
T ss_dssp SSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH-----------------------------------------------
T ss_pred CCCccceEEEcCCCCEEEccccccccccccccc-----------------------------------------------
Confidence 999999999999999999999988433211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 177 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l 214 (283)
T 3gen_A 177 ------------------------------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214 (283)
T ss_dssp ------------------------------------------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 00013467889999999988899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... .....+.....+.......+...+++.+||..+|.+|||+.++++|
T Consensus 215 ~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 215 YSLGKMPYERFTNS-ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCccccChh-HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 97 55544332 3333444333322222334556699999999999999999999874
No 187
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.96 E-value=8.6e-30 Score=265.61 Aligned_cols=195 Identities=16% Similarity=0.204 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++..++.|+.||+.||.|||++||+|
T Consensus 61 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 136 (289)
T 4fvq_A 61 EAASMMSKLSHKHLVLNYG-VCVC---GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIH 136 (289)
T ss_dssp HHHHHHHTSCCTTBCCEEE-EECC---TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeEEEE-EEEe---CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeEC
Confidence 4556788899999999888 5532 3345677777 579999999666556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCc--------EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 106 HNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 106 rDLkP~NIll~~~~~--------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
|||||+||+++.++. ++++|||++......
T Consensus 137 ~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------------------------------ 174 (289)
T 4fvq_A 137 GNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK------------------------------------------ 174 (289)
T ss_dssp CCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH------------------------------------------
T ss_pred CCcCcceEEEecCCcccccccceeeeccCcccccccCc------------------------------------------
Confidence 999999999998876 999999887322100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-CCCCCccchH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIY 256 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIw 256 (712)
....|++.|+|||.+.+ ..++.++|||
T Consensus 175 ----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Diw 202 (289)
T 4fvq_A 175 ----------------------------------------------------DILQERIPWVPPECIENPKNLNLATDKW 202 (289)
T ss_dssp ----------------------------------------------------HHHHHTTTTSCHHHHHCGGGCCHHHHHH
T ss_pred ----------------------------------------------------cccCCcCcccCHHHhCCCCCCCchhHHH
Confidence 01346889999999987 6699999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||++|||++ |+............... ...+. ...+...+|+.+||+.||.+|||+.+++++
T Consensus 203 slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 203 SFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA---PKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp HHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999998 33332222222222222 11221 224566799999999999999999999984
No 188
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=266.21 Aligned_cols=196 Identities=18% Similarity=0.253 Sum_probs=147.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC--CCChhHHHHHHHHHHHHHHHhhh---
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS--- 100 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~--~l~~~~~~~i~~qil~~l~~lHs--- 100 (712)
++..+|+.++||||+++++ ++. +.+++++|+ .|++|.+++..... .++..+++.++.||+.||.|||+
T Consensus 50 ~E~~~l~~l~hp~iv~~~~-~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~ 123 (307)
T 2eva_A 50 VELRQLSRVNHPNIVKLYG-ACL-----NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123 (307)
T ss_dssp HHHHHHHHCCCTTBCCEEE-BCT-----TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHhcCCCCCcCeEEE-EEc-----CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4556788899999999887 443 236777777 58999999955432 36889999999999999999999
Q ss_pred cCceeccCCCCceeecCCCc-EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~-vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||+||||||+||+++.++. +|++|||++......
T Consensus 124 ~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 159 (307)
T 2eva_A 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-------------------------------------------- 159 (307)
T ss_dssp SCCCCCCCSGGGEEEETTTTEEEECCCCC---------------------------------------------------
T ss_pred CCeecCCCChhHEEEeCCCCEEEEcccccccccccc--------------------------------------------
Confidence 89999999999999998876 799999987432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
.....|++.|+|||.+.+..++.++||||||
T Consensus 160 -------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 190 (307)
T 2eva_A 160 -------------------------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWG 190 (307)
T ss_dssp ------------------------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHH
T ss_pred -------------------------------------------------cccCCCCCceEChhhhCCCCCCcHHHHHHHH
Confidence 0013579999999999998999999999999
Q ss_pred HHHHHhhC---CCCCCh-hhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 260 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 260 vll~eLl~---pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++|||++ ||.... .....+........++......+...+++.+||..||.+|||+.++++
T Consensus 191 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 191 IILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999 564322 222233333334344433334455669999999999999999999986
No 189
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.96 E-value=1.4e-29 Score=261.37 Aligned_cols=198 Identities=16% Similarity=0.184 Sum_probs=147.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC---
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG--- 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g--- 102 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++.. ..+++.++..++.||+.||.|||++|
T Consensus 55 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~ 128 (271)
T 3dtc_A 55 QEAKLFAMLKHPNIIALRG-VCLK---EPNLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVP 128 (271)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECC---C--CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHhcCCCCEeeEEE-EEec---CCceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 4556788899999999888 5532 2356777777 58999999853 34899999999999999999999999
Q ss_pred ceeccCCCCceeecC--------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 103 IVVHNVRPSCFVMSS--------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 103 IvHrDLkP~NIll~~--------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|+||||||+||+++. ++.++++|||++.......
T Consensus 129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------- 170 (271)
T 3dtc_A 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-------------------------------------- 170 (271)
T ss_dssp CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------------------------------------
T ss_pred eeecCCchHHEEEecccccccccCcceEEccCCccccccccc--------------------------------------
Confidence 999999999999985 6789999999884321110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sD 254 (712)
.....|++.|+|||.+.+..++.++|
T Consensus 171 ------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~D 196 (271)
T 3dtc_A 171 ------------------------------------------------------KMSAAGAYAWMAPEVIRASMFSKGSD 196 (271)
T ss_dssp -----------------------------------------------------------CCGGGSCHHHHHHCCCSHHHH
T ss_pred ------------------------------------------------------ccCCCCccceeCHHHhccCCCCchhh
Confidence 00145799999999999888999999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||||++|+|++ ||..................++......+...+++.+||..||.+|||+.+++++
T Consensus 197 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 197 VWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 9999999999999 6665544433333333332222222334455699999999999999999999874
No 190
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.96 E-value=1.4e-29 Score=264.79 Aligned_cols=208 Identities=17% Similarity=0.122 Sum_probs=152.9
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
.+..++..+.|+|++..+..++ .....+++++|+.+++|.+++......+++.+++.++.||+.||.|||++||+||
T Consensus 53 ~e~~~l~~l~~~~~i~~~~~~~---~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~ 129 (296)
T 4hgt_A 53 IESKIYKMMQGGVGIPTIRWCG---AEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 129 (296)
T ss_dssp HHHHHHHHHTTSTTCCCEEEEE---EETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHHHHHhcCCCCCCeeeeec---CCCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 4455778888999888777333 2345678899999999999996555569999999999999999999999999999
Q ss_pred cCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||+||++ +..+.+||+|||++...........
T Consensus 130 Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~------------------------------------------- 166 (296)
T 4hgt_A 130 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------------------- 166 (296)
T ss_dssp CCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-------------------------------------------
T ss_pred CCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc-------------------------------------------
Confidence 999999999 7889999999999854422210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCc-ccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFP-MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.+ .......||+.|+|||.+.+..++.++|||||||++
T Consensus 167 -----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 205 (296)
T 4hgt_A 167 -----------------------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL 205 (296)
T ss_dssp -----------------------------------------CCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------CCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHH
Confidence 00 000115689999999999999999999999999999
Q ss_pred HHhhC---CCCCChhh--HHHHHhhcc---cCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEEK--TRTMSSLRH---RVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~~--~~~~~~~~~---~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||...... ...+..+.. ....+..... .+...+++.+||+.||.+|||+.++++
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 99998 66532111 111111111 1111112122 345559999999999999999999987
No 191
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.96 E-value=3.2e-29 Score=261.16 Aligned_cols=196 Identities=15% Similarity=0.200 Sum_probs=148.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcC--c
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG--I 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~g--I 103 (712)
++..++..++||||+++++ ++.+. . ++++|+ .+++|.+++......+++..++.++.||+.||+|||++| |
T Consensus 72 ~E~~~l~~l~h~~i~~~~~-~~~~~----~-~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~i 145 (287)
T 4f0f_A 72 REVFIMSNLNHPNIVKLYG-LMHNP----P-RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145 (287)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EETTT----T-EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHhCCCCCchhhhe-eecCC----C-eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 4556788899999999888 54322 2 456666 589999998666667999999999999999999999999 9
Q ss_pred eeccCCCCceeecCCCc-----EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 104 VVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~-----vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
+||||||+||+++.++. +|++|||+++.....
T Consensus 146 vH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------------------------------- 182 (287)
T 4f0f_A 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS------------------------------------------- 182 (287)
T ss_dssp BCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC-------------------------------------------
T ss_pred ecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc-------------------------------------------
Confidence 99999999999987776 999999987432111
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCccccc--CCCCCCccchH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDIY 256 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~sDIw 256 (712)
.....|++.|+|||.+. ...++.++|||
T Consensus 183 --------------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~ 212 (287)
T 4f0f_A 183 --------------------------------------------------VSGLLGNFQWMAPETIGAEEESYTEKADTY 212 (287)
T ss_dssp --------------------------------------------------EECCCCCCTTSCGGGSSCSSCEECHHHHHH
T ss_pred --------------------------------------------------ccccCCCccccCchhhccCCCCcCchhhHH
Confidence 00146899999999984 44478999999
Q ss_pred HHHHHHHHhhC---CCCCChhhH-HHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC---PFSTGEEKT-RTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|+|++ ||....... .....+.....++... ...+...+++.+||..||.+|||+.++++
T Consensus 213 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 213 SFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999 665433221 1222222222222222 33445569999999999999999999986
No 192
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.96 E-value=2e-29 Score=274.28 Aligned_cols=203 Identities=16% Similarity=0.158 Sum_probs=154.8
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~ 89 (712)
++..+++.+ +||||+++++ ++.. ...+++++|+ .|++|.+++.... ..+++.+++.|+.
T Consensus 123 ~E~~~l~~l~~hpnIv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 198 (382)
T 3tt0_A 123 SEMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY 198 (382)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCchhhhhee-eecc---CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHH
Confidence 455567777 9999999888 5532 3456777777 5889999994322 3489999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+|||++.++.+||+|||+++..+.....
T Consensus 199 qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~------------------------------- 247 (382)
T 3tt0_A 199 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY------------------------------- 247 (382)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT-------------------------------
T ss_pred HHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999998544222000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......+++.|+|||++.+..+
T Consensus 248 ---------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~ 270 (382)
T 3tt0_A 248 ---------------------------------------------------------KKTTNGRLPVKWMAPEALFDRIY 270 (382)
T ss_dssp ---------------------------------------------------------CCCTTCCCGGGGSCHHHHHSCCC
T ss_pred ---------------------------------------------------------ccccCCCCCcceeCHHHhcCCCC
Confidence 00001356889999999999999
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|+|++ ||.... .......+.....+.......+...+|+.+||..||.+|||+.+++++
T Consensus 271 ~~~~DiwslG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 271 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999997 454332 233444444443333333344556699999999999999999999883
No 193
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.96 E-value=2e-29 Score=263.71 Aligned_cols=208 Identities=18% Similarity=0.163 Sum_probs=152.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..+.|+|++..+. .+ ......+++++|+.+++|.+++......+++.+++.++.||+.||.|||++||+||
T Consensus 53 ~e~~~l~~l~~~~~i~~~~-~~--~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~ 129 (296)
T 3uzp_A 53 IESKIYKMMQGGVGIPTIR-WC--GAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHR 129 (296)
T ss_dssp HHHHHHHHHTTSTTCCCEE-EE--EEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHHHHHhhcCCCCCccc-cc--cCCCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 4555788889999887776 33 22345678889988999999996555569999999999999999999999999999
Q ss_pred cCCCCceeec---CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||+||+++ .++.+||+|||++...........
T Consensus 130 dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------------------- 166 (296)
T 3uzp_A 130 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------------------- 166 (296)
T ss_dssp CCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-------------------------------------------
T ss_pred CCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc-------------------------------------------
Confidence 9999999994 788999999999854322210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCc-ccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFP-MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.+ .......|++.|+|||.+.+..++.++|||||||++
T Consensus 167 -----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 205 (296)
T 3uzp_A 167 -----------------------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL 205 (296)
T ss_dssp -----------------------------------------CCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccccccccccccCChhhhcCCCCCcchhhHHHHHHH
Confidence 00 000115789999999999999999999999999999
Q ss_pred HHhhC---CCCCChh--hHHHHHhhc---ccCCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEE--KTRTMSSLR---HRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~--~~~~~~~~~---~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++ ||..... ....+..+. .....+...... +...+++.+||+.||.+|||+.++++
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 99999 6653211 111111111 111111222233 44559999999999999999999876
No 194
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.96 E-value=1.7e-29 Score=266.48 Aligned_cols=203 Identities=15% Similarity=0.173 Sum_probs=152.5
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-----------------CCChhHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-----------------SVDVYECLHI 87 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-----------------~l~~~~~~~i 87 (712)
++..+|..+ +||||+++++ ++.. ...+++++|+ .+++|.+++..... .+++.+++.+
T Consensus 75 ~E~~~l~~l~~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (313)
T 1t46_A 75 SELKVLSYLGNHMNIVNLLG-ACTI---GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150 (313)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHH
T ss_pred HHHHHHhhcccCCCeeeEEE-EEec---CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHH
Confidence 445567777 9999999888 5533 3456777777 58899999944322 4899999999
Q ss_pred HHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcc
Q 005147 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (712)
Q Consensus 88 ~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (712)
+.||+.||.|||++||+||||||+||+++.++.+|++|||++...+.....
T Consensus 151 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------- 201 (313)
T 1t46_A 151 SYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY----------------------------- 201 (313)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTS-----------------------------
T ss_pred HHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999998544322000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC
Q 005147 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (712)
Q Consensus 168 ~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (712)
.......|++.|+|||.+.+.
T Consensus 202 -----------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~ 222 (313)
T 1t46_A 202 -----------------------------------------------------------VVKGNARLPVKWMAPESIFNC 222 (313)
T ss_dssp -----------------------------------------------------------EECSSSEECGGGCCHHHHHHC
T ss_pred -----------------------------------------------------------eeccCCCCcceeeChHHhcCC
Confidence 000013568899999999888
Q ss_pred CCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 248 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 248 ~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
.++.++|||||||++|+|++ ||............+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 223 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 89999999999999999997 554433333333333333222222233445569999999999999999999987
No 195
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.96 E-value=1.2e-29 Score=263.54 Aligned_cols=201 Identities=21% Similarity=0.201 Sum_probs=151.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...++++++ .+++|.+++......+++..+..++.||+.||.|||++||+|
T Consensus 62 ~E~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 136 (281)
T 3cc6_A 62 SEAVIMKNLDHPHIVKLIG-IIEE----EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH 136 (281)
T ss_dssp HHHHHHHHHCCTTBCCEEE-EECS----SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCcceEEE-EEcC----CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4556788899999999888 5532 233555555 689999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 137 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 169 (281)
T 3cc6_A 137 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYY----------------------------------------------- 169 (281)
T ss_dssp CCCSGGGEEEEETTEEEECCCCGGGCC-----------------------------------------------------
T ss_pred CCCccceEEECCCCcEEeCccCCCccccccccc-----------------------------------------------
Confidence 999999999999999999999988543221000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 170 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 207 (281)
T 3cc6_A 170 ------------------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEI 207 (281)
T ss_dssp ---------------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHH
Confidence 00013468899999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... .....+.....++......+...+++.+||..||.+|||+.+++++
T Consensus 208 lt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 208 LSFGKQPFFWLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp HTTTCCTTTTSCGG-GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCcccCChH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 96 55433322 2223333332222222334556699999999999999999999873
No 196
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.96 E-value=2.1e-29 Score=280.01 Aligned_cols=198 Identities=17% Similarity=0.139 Sum_probs=152.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~-~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++.. ....+++++|+ .+++|.++|...+. .+++..++.++.||+.||+|||++||+
T Consensus 235 ~E~~~l~~l~h~niv~~~~-~~~~--~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 311 (450)
T 1k9a_A 235 AEASVMTQLRHSNLVQLLG-VIVE--EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311 (450)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC--TTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhccCCCEEEEEE-EEEc--CCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4556788999999999988 4422 22357778887 58899999954433 379999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++.....
T Consensus 312 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------------------------------------------------- 342 (450)
T 1k9a_A 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------------------------------------- 342 (450)
T ss_dssp CSCCCGGGEEECTTSCEEECCCTTCEECC---------------------------------------------------
T ss_pred CCCCCHhhEEECCCCCEEEeeCCCccccccc-------------------------------------------------
Confidence 9999999999999999999999988432110
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....++..|+|||.+.+..++.++|||||||++||
T Consensus 343 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~e 378 (450)
T 1k9a_A 343 --------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 378 (450)
T ss_dssp ------------------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence 000245788999999999999999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||...... .....+..+..++......+...++|.+||..||.+|||+.++++
T Consensus 379 l~t~g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 379 IYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHTTTCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 997 56543322 233334343333333334455669999999999999999999876
No 197
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.96 E-value=1.7e-29 Score=263.48 Aligned_cols=204 Identities=19% Similarity=0.228 Sum_probs=155.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .+++|.+++.... .+++.+++.++.||+.||.|||++||+|
T Consensus 70 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H 144 (287)
T 2wei_A 70 REVELLKKLDHPNIMKLFE-ILED---SSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVH 144 (287)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEC---SSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhccCCCccEEEE-EEeC---CCeEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4556788899999999888 4432 3456777777 5899999884433 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCC---cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 106 HNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 106 rDLkP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|||||+||+++..+ .+|++|||++.......
T Consensus 145 ~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------- 178 (287)
T 2wei_A 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---------------------------------------------- 178 (287)
T ss_dssp SCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----------------------------------------------
T ss_pred cCCChhhEEEecCCCcccEEEeccCcceeecCCC----------------------------------------------
Confidence 99999999997543 69999999874332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+. ++.++|||||||++
T Consensus 179 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l 212 (287)
T 2wei_A 179 ---------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212 (287)
T ss_dssp ---------------------------------------------SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCcccccChHHhcCC-CCCchhhHhHHHHH
Confidence 00013578999999998764 89999999999999
Q ss_pred HHhhC---CCCCChhhHHHHHhhcccCCC---chhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCC
Q 005147 263 FELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (712)
Q Consensus 263 ~eLl~---pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~ 328 (712)
|+|++ ||...... .....+.....+ +......+...++|.+||..||.+|||+.++|+||||+..
T Consensus 213 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 213 YILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 99998 66544332 333333333322 2222334556699999999999999999999999999754
No 198
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.96 E-value=1.8e-29 Score=266.39 Aligned_cols=203 Identities=16% Similarity=0.173 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-----------------------CCCChh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSVDVY 82 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-----------------------~~l~~~ 82 (712)
++..+|+.++||||+++++ ++.+ ...+++++|+ .|++|.+++.... ..+++.
T Consensus 75 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (314)
T 2ivs_A 75 SEFNVLKQVNHPHVIKLYG-ACSQ---DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150 (314)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHH
T ss_pred HHHHHHhhCCCCceeeEEE-EEec---CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHH
Confidence 4556788899999999888 4432 3456777776 5899999994322 238999
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
+++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 151 ~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~------------------------ 206 (314)
T 2ivs_A 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY------------------------ 206 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccc------------------------
Confidence 99999999999999999999999999999999999999999999988543221000
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
.......+++.|+|||
T Consensus 207 ----------------------------------------------------------------~~~~~~~~~~~y~aPE 222 (314)
T 2ivs_A 207 ----------------------------------------------------------------VKRSQGRIPVKWMAIE 222 (314)
T ss_dssp ----------------------------------------------------------------ECSSCCCSCGGGCCHH
T ss_pred ----------------------------------------------------------------eeccCCCCcccccChh
Confidence 0000135688999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (712)
.+.+..++.++|||||||++|||++ ||..... ......+.....+.......+...+++.+||..||.+|||+.+
T Consensus 223 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 301 (314)
T 2ivs_A 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301 (314)
T ss_dssp HHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 9988889999999999999999997 4543322 2333334433333333334455669999999999999999999
Q ss_pred HhcC
Q 005147 319 LLQS 322 (712)
Q Consensus 319 iL~h 322 (712)
++++
T Consensus 302 l~~~ 305 (314)
T 2ivs_A 302 ISKD 305 (314)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9873
No 199
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.2e-29 Score=262.52 Aligned_cols=203 Identities=13% Similarity=0.114 Sum_probs=156.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ...+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 59 ~E~~~l~~l~h~~i~~~~~-~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 133 (287)
T 1u59_A 59 REAQIMHQLDNPYIVRLIG-VCQ----AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133 (287)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEE----SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEeEEEE-Eec----CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 4556788899999999888 542 2346777776 588999999666666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++...+..... .
T Consensus 134 ~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 167 (287)
T 1u59_A 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y-------------- 167 (287)
T ss_dssp CCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E--------------
T ss_pred CCCchheEEEcCCCCEEECcccceeeeccCcce--------------------------------e--------------
Confidence 999999999999999999999998544322100 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 168 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 206 (287)
T 1u59_A 168 -----------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 206 (287)
T ss_dssp -----------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 000013468899999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||..... ...+..+.....+.......+...++|.+||..+|.+||++.+++++
T Consensus 207 lt~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 207 LSYGQKPYKKMKG-PEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HTTSCCTTTTCCT-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCcccCCH-HHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 97 5544332 23344444443333333444566699999999999999999999985
No 200
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=2.5e-29 Score=272.52 Aligned_cols=203 Identities=16% Similarity=0.165 Sum_probs=147.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+. |++|.+++.+.+..+++.++..|+.||+.||.|||++||+|
T Consensus 95 ~E~~~l~~l~h~niv~~~~-~~~~---~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 170 (373)
T 2qol_A 95 GEASIMGQFDHPNIIRLEG-VVTK---SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVH 170 (373)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEee---CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 4556788999999999888 5532 34667777775 89999999776667999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||+++........ ..
T Consensus 171 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~-------------- 205 (373)
T 2qol_A 171 RDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-------------------------------AY-------------- 205 (373)
T ss_dssp SCCCGGGEEECTTCCEEECCC-----------------------------------------------------------
T ss_pred CCCCcceEEEcCCCCEEECcCccccccccCCcc-------------------------------ce--------------
Confidence 999999999999999999999998543221000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 206 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~el 243 (373)
T 2qol_A 206 ------------------------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243 (373)
T ss_dssp --------------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHH
Confidence 00002357789999999988899999999999999998
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++......+...+++.+||+.||.+||++.++++
T Consensus 244 lt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 244 MSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HTTC-CTTTTCCHH-HHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 86 66544332 333333333222222233345569999999999999999999886
No 201
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.96 E-value=5.7e-30 Score=272.30 Aligned_cols=207 Identities=17% Similarity=0.132 Sum_probs=154.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+.+++.++ ......+++++|+. |++|.+++......+++.+++.|+.||+.||+|||++||+|
T Consensus 73 ~E~~~l~~l~h~~i~~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH 150 (327)
T 3lxl_A 73 REIQILKALHSDFIVKYRGVSY--GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150 (327)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEE--CSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCceeEEEEEEe--cCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 5566788899999999888333 22345577888875 99999999654445999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++...+..... .
T Consensus 151 ~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 184 (327)
T 3lxl_A 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDY--------------------------------Y-------------- 184 (327)
T ss_dssp SCCSGGGEEEEETTEEEECCGGGCEECCTTCSE--------------------------------E--------------
T ss_pred CCCChhhEEECCCCCEEEcccccceecccCCcc--------------------------------c--------------
Confidence 999999999999999999999998543222000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 185 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 223 (327)
T 3lxl_A 185 -----------------------------------------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223 (327)
T ss_dssp -----------------------------------------ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHH
Confidence 000113578899999999888899999999999999999
Q ss_pred hC---CCCCChhh--------------HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 266 FC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 266 l~---pf~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
++ ||...... ......+.....++......+...+|+.+||..||.+|||+.+++++
T Consensus 224 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 224 FTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp HTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99 33322111 11222222222233333334556699999999999999999999763
No 202
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.96 E-value=9.3e-30 Score=266.84 Aligned_cols=207 Identities=14% Similarity=0.151 Sum_probs=145.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh------
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH------ 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH------ 99 (712)
.+...+..++||||+++++..+........+++++|+ .+++|.++++.. .+++..++.|+.||+.||+|||
T Consensus 51 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 128 (301)
T 3q4u_A 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGT 128 (301)
T ss_dssp HHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCST
T ss_pred HHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 3333344489999999988433333344567788887 588999999543 4899999999999999999999
Q ss_pred --hcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 100 --SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 100 --s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
++||+||||||+||+++.++.+||+|||++......... .
T Consensus 129 ~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~------ 170 (301)
T 3q4u_A 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ--------------------------------L------ 170 (301)
T ss_dssp TCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E------
T ss_pred cCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc--------------------------------c------
Confidence 999999999999999999999999999988432111000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC------CCCC
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVSC 251 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~~~ 251 (712)
........||+.|+|||.+.+. .++.
T Consensus 171 ------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 202 (301)
T 3q4u_A 171 ------------------------------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK 202 (301)
T ss_dssp ------------------------------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHH
T ss_pred ------------------------------------------------cccccccccccceeChhhhcCcCCCCcccCCc
Confidence 0000114689999999999877 4557
Q ss_pred ccchHHHHHHHHHhhCC-------------CCCC---hhhHHHHHh-hcccCCCchhh-----h-cCchhHHHHHHcCCC
Q 005147 252 ASDIYRLGVLLFELFCP-------------FSTG---EEKTRTMSS-LRHRVLPPQLL-----L-KFPKEASFCLWLLHP 308 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~p-------------f~~~---~~~~~~~~~-~~~~~~~~~~~-----~-~~~~~~~li~~~L~~ 308 (712)
++|||||||++|||+++ |... ......+.. .......+... . ..+...+|+.+||..
T Consensus 203 ~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 282 (301)
T 3q4u_A 203 RVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQ 282 (301)
T ss_dssp HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCS
T ss_pred hhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhc
Confidence 99999999999999974 3221 111111111 11111111111 1 123455999999999
Q ss_pred CCCCCCCHHHHhc
Q 005147 309 EPSGRPKMGELLQ 321 (712)
Q Consensus 309 dP~~Rpt~~eiL~ 321 (712)
||.+|||+.++++
T Consensus 283 dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 283 NPSARLTALRIKK 295 (301)
T ss_dssp SGGGSCCHHHHHH
T ss_pred ChhhCCCHHHHHH
Confidence 9999999999986
No 203
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.96 E-value=1.6e-29 Score=268.11 Aligned_cols=202 Identities=17% Similarity=0.222 Sum_probs=150.8
Q ss_pred cceeeccC--CCCCcccccccccccccccCceEEEEeeC-C-ccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 28 DGVELTHG--DHLRNQGGLSGVCENEAAIDPFVHAIEWG-D-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 28 ~~~~l~~~--~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g-~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
+..++..+ +|+||+.+++ ++.. ...+++++++. + ++|.+++.... .+++.+++.++.||+.||+|||++||
T Consensus 96 E~~~l~~l~~~~~~i~~~~~-~~~~---~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~i 170 (320)
T 3a99_A 96 EVVLLKKVSSGFSGVIRLLD-WFER---PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGV 170 (320)
T ss_dssp HHHHHHHHCSSSCSBCCEEE-EEEC---SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhhccCCCCceEEEE-EEec---CCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 44456666 4699999888 5432 24566777764 3 89999995433 48999999999999999999999999
Q ss_pred eeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 104 VVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 104 vHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
+||||||+||+++ .++.+||+|||++.......
T Consensus 171 vH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------- 204 (320)
T 3a99_A 171 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---------------------------------------------- 204 (320)
T ss_dssp ECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC----------------------------------------------
T ss_pred EeCCCCHHHEEEeCCCCCEEEeeCcccccccccc----------------------------------------------
Confidence 9999999999999 77899999999874332110
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 261 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvl 261 (712)
.....||+.|+|||++.+..+ +.++|||||||+
T Consensus 205 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i 238 (320)
T 3a99_A 205 ----------------------------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 238 (320)
T ss_dssp ----------------------------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCCCccCCChHHhccCCCCCccchHHhHHHH
Confidence 001457999999999987765 788999999999
Q ss_pred HHHhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 262 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 262 l~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
+|||+++..+.......... ....+ ....+...+||.+||..||.+|||+.++++||||+....+
T Consensus 239 l~el~~g~~pf~~~~~~~~~--~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 239 LYDMVCGDIPFEHDEEIIRG--QVFFR---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303 (320)
T ss_dssp HHHHHHSSCSCCSHHHHHHC--CCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred HHHHHHCCCCCCChhhhhcc--ccccc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence 99999933222222111111 11111 1223455699999999999999999999999999987653
No 204
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=265.40 Aligned_cols=203 Identities=18% Similarity=0.277 Sum_probs=147.6
Q ss_pred ccceeeccC----CCCCcccccccccccccccCceEEEEee--CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 005147 27 SDGVELTHG----DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 27 ~~~~~l~~~----~H~ni~~~~~~~~~~~~~~~~~~l~~e~--~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
++..++..+ +||||+++++ ++.. ...+++++++ .+++|.+++...+ .+++.+++.++.||+.||+|||+
T Consensus 83 ~e~~~l~~l~~~~~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~ 157 (312)
T 2iwi_A 83 LEVALLWKVGAGGGHPGVIRLLD-WFET---QEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHS 157 (312)
T ss_dssp HHHHHHHHHHSSCCCSSBCCEEE-EC--------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCCCCCeeeEEE-EEec---CCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 344455555 8999999888 4432 2345555554 6899999995543 48999999999999999999999
Q ss_pred cCceeccCCCCceeec-CCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 101 QGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||+||||||+||+++ .++.++|+|||++.......
T Consensus 158 ~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~------------------------------------------- 194 (312)
T 2iwi_A 158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP------------------------------------------- 194 (312)
T ss_dssp HTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC-------------------------------------------
T ss_pred CCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc-------------------------------------------
Confidence 9999999999999999 78999999999874332110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC-CCccchHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRL 258 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSl 258 (712)
.....|++.|+|||++.+..+ +.++|||||
T Consensus 195 -------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 225 (312)
T 2iwi_A 195 -------------------------------------------------YTDFDGTRVYSPPEWISRHQYHALPATVWSL 225 (312)
T ss_dssp -------------------------------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHH
T ss_pred -------------------------------------------------ccccCCcccccCceeeecCCCCCccchHHHH
Confidence 001457999999999977665 458999999
Q ss_pred HHHHHHhhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCcCc
Q 005147 259 GVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (712)
Q Consensus 259 Gvll~eLl~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~~~ 331 (712)
||++|+|+++..+.......... ....+ ....+...+||.+||..||.+|||+.++++||||+.....
T Consensus 226 G~il~~l~~g~~pf~~~~~~~~~--~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~ 293 (312)
T 2iwi_A 226 GILLYDMVCGDIPFERDQEILEA--ELHFP---AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED 293 (312)
T ss_dssp HHHHHHHHHSSCSCCSHHHHHHT--CCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred HHHHHHHHHCCCCCCChHHHhhh--ccCCc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence 99999999933322222222111 11111 1233455699999999999999999999999999987553
No 205
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.96 E-value=1.5e-29 Score=274.77 Aligned_cols=202 Identities=16% Similarity=0.167 Sum_probs=153.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.++++..+..+++.+++.++.||+.||+|||++||+|
T Consensus 161 ~E~~~l~~l~hpniv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH 236 (377)
T 3cbl_A 161 QEARILKQYSHPNIVRLIG-VCTQ---KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236 (377)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEec---CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 4556788999999999888 5532 3457777877 589999999665556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++........
T Consensus 237 rDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~----------------------------------------------- 269 (377)
T 3cbl_A 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVYA----------------------------------------------- 269 (377)
T ss_dssp SCCSGGGEEECTTCCEEECCGGGCEECTTSEEE-----------------------------------------------
T ss_pred cccCHHHEEEcCCCcEEECcCCCceecCCCcee-----------------------------------------------
Confidence 999999999999999999999988532111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||.+.+..++.++|||||||++|||
T Consensus 270 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el 308 (377)
T 3cbl_A 270 -----------------------------------------ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET 308 (377)
T ss_dssp -----------------------------------------CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHH
Confidence 000002346789999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++
T Consensus 309 ~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 309 FSLGASPYPNLSNQ-QTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HTTSCCSSTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 97 56544332 233333333322222223345569999999999999999999976
No 206
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.95 E-value=1.7e-29 Score=261.99 Aligned_cols=198 Identities=16% Similarity=0.121 Sum_probs=147.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..++||||+++++ ++.. ....+++++|+ .+++|.+++.... ..+++.++..++.||+.||.|||++||+
T Consensus 63 ~E~~~l~~l~h~~iv~~~~-~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 139 (278)
T 1byg_A 63 AEASVMTQLRHSNLVQLLG-VIVE--EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139 (278)
T ss_dssp HTHHHHTTCCCTTBCCEEE-EECC--C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEc--CCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4666788999999999888 4322 22356777777 5789999995432 2378999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++...+..
T Consensus 140 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------------------------------------- 170 (278)
T 1byg_A 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------------------------------------- 170 (278)
T ss_dssp CSCCSGGGEEECTTSCEEECCCCC--------------------------------------------------------
T ss_pred ccCCCcceEEEeCCCcEEEeecccccccccc-------------------------------------------------
Confidence 9999999999999999999999987432111
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 206 (278)
T 1byg_A 171 --------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 206 (278)
T ss_dssp -------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHH
Confidence 000245788999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 207 l~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 207 IYSFGRVPYPRIPL-KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHTTSCCSCTTSCG-GGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCCH-HHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 997 5543322 2333334333333322333455669999999999999999999986
No 207
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=3.1e-29 Score=258.09 Aligned_cols=201 Identities=14% Similarity=0.172 Sum_probs=153.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++......+++..+..++.||+.||.|||++||+|
T Consensus 52 ~e~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 127 (267)
T 3t9t_A 52 EEAEVMMKLSHPKLVQLYG-VCLE---QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127 (267)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS---SSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcc---CCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4555788899999999888 4432 3456777777 588999999665556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++.........
T Consensus 128 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 160 (267)
T 3t9t_A 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT----------------------------------------------- 160 (267)
T ss_dssp SSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-----------------------------------------------
T ss_pred CCCchheEEECCCCCEEEccccccccccccccc-----------------------------------------------
Confidence 999999999999999999999988432111000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 161 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 198 (267)
T 3t9t_A 161 ------------------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198 (267)
T ss_dssp ------------------------------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccccccccChhhhcCCCccchhchhhhHHHHHHH
Confidence 00013467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||.... .......+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 199 ~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 199 FSEGKIPYENRS-NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp HTTSCCTTTTCC-HHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hccCCCCCCCCC-HHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 98 454333 23334444443332222233455669999999999999999999987
No 208
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.95 E-value=2.8e-29 Score=268.41 Aligned_cols=202 Identities=15% Similarity=0.123 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-----------------------CCCCChh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSVDVY 82 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-----------------------~~~l~~~ 82 (712)
++..+++.++||||+++++ ++.+ ...+++++|+ .|++|.+++... ...+++.
T Consensus 99 ~E~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (343)
T 1luf_A 99 REAALMAEFDNPNIVKLLG-VCAV---GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174 (343)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHH
T ss_pred HHHHHHHhCCCCCEEEEEE-EEcc---CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHH
Confidence 4566788899999999888 5532 3456777776 588999999442 1458999
Q ss_pred HHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHH
Q 005147 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (712)
Q Consensus 83 ~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (712)
+++.|+.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 175 ~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------- 229 (343)
T 1luf_A 175 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------------------- 229 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999998843211100
Q ss_pred hhhccccccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcc
Q 005147 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (712)
Q Consensus 163 ~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (712)
+ .......|++.|+|||
T Consensus 230 --------~-------------------------------------------------------~~~~~~~~t~~y~aPE 246 (343)
T 1luf_A 230 --------Y-------------------------------------------------------KADGNDAIPIRWMPPE 246 (343)
T ss_dssp --------B-------------------------------------------------------C----CCBCGGGCCHH
T ss_pred --------c-------------------------------------------------------cccCCCcccceecChh
Confidence 0 0000135789999999
Q ss_pred cccCCCCCCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHH
Q 005147 243 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (712)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (712)
.+.+..++.++|||||||++|||++ ||..... ......+.....+.......+...+++.+||..||.+|||+.+
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 325 (343)
T 1luf_A 247 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH-EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCS 325 (343)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-HHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 9998889999999999999999997 5554433 2333444444333322333445669999999999999999999
Q ss_pred Hhc
Q 005147 319 LLQ 321 (712)
Q Consensus 319 iL~ 321 (712)
+++
T Consensus 326 ~~~ 328 (343)
T 1luf_A 326 IHR 328 (343)
T ss_dssp HHH
T ss_pred HHH
Confidence 987
No 209
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.95 E-value=2e-29 Score=267.28 Aligned_cols=204 Identities=17% Similarity=0.243 Sum_probs=148.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---CCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..+++.++||||+++++ ++.. ...+++++|+ .|++|.+++.... ..+++.+++.++.||+.||+|||++|
T Consensus 84 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 159 (321)
T 2qkw_B 84 TEIETLSFCRHPHLVSLIG-FCDE---RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA 159 (321)
T ss_dssp HHHHGGGSCCCTTBCCEEE-ECCC---TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcC---CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 5566788999999999888 5432 3456677776 5899999994432 34899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.+|++|||++.........
T Consensus 160 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 195 (321)
T 2qkw_B 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQT-------------------------------------------- 195 (321)
T ss_dssp EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC--------------------------------------------
T ss_pred eecCCCCHHHEEECCCCCEEEeeccccccccccccc--------------------------------------------
Confidence 999999999999999999999999988432111000
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 196 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 231 (321)
T 2qkw_B 196 --------------------------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231 (321)
T ss_dssp --------------------------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHHHHH
Confidence 000114589999999999888899999999999999
Q ss_pred HHhhC---CCCCChhh-----HH-HHHhhccc----CCCchh-----hhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 263 FELFC---PFSTGEEK-----TR-TMSSLRHR----VLPPQL-----LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 263 ~eLl~---pf~~~~~~-----~~-~~~~~~~~----~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
|||++ ||...... .. ........ ...+.. ........+++.+||..||++|||+.+++++
T Consensus 232 ~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 309 (321)
T 2qkw_B 232 FEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309 (321)
T ss_dssp HHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99998 55432111 00 00000111 111111 1122334589999999999999999999874
No 210
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.95 E-value=6.6e-29 Score=262.21 Aligned_cols=205 Identities=13% Similarity=0.095 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCccccccccccccccc--CceEEEEee-CCccHHHhhc-----CCCCCCChhHHHHHHHHHHHHHHHh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAI--DPFVHAIEW-GDVSLRQWLD-----KPKRSVDVYECLHIFRQIVEIVYAA 98 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~--~~~~l~~e~-~g~sL~~~l~-----~~~~~l~~~~~~~i~~qil~~l~~l 98 (712)
++..+++.++||||+++++ ++...... ...++++++ .+++|.+++. .....+++.+++.|+.||+.||.||
T Consensus 85 ~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 163 (313)
T 3brb_A 85 SEAACMKDFSHPNVIRLLG-VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL 163 (313)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeeeeeE-EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 3455788899999999998 44332222 245666666 6889999982 2334589999999999999999999
Q ss_pred hhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 99 Hs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
|++||+||||||+||+++.++.+||+|||++.........
T Consensus 164 H~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------- 203 (313)
T 3brb_A 164 SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY---------------------------------------- 203 (313)
T ss_dssp HTTTCCCCCCSGGGEEECTTSCEEECSCSCC-------------------------------------------------
T ss_pred HhCCcccCCCCcceEEEcCCCcEEEeecCcceeccccccc----------------------------------------
Confidence 9999999999999999999999999999988543211000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHH
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (712)
.......+++.|+|||.+.+..++.++|||||
T Consensus 204 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 235 (313)
T 3brb_A 204 ------------------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 235 (313)
T ss_dssp -------------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHH
T ss_pred ------------------------------------------------CcccccCCCccccCchhhcCCCccchhhhHHH
Confidence 00001346889999999999999999999999
Q ss_pred HHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 259 Gvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||++|+|++ ||...... .....+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 236 G~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 236 GVTMWEIATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp HHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 999999998 44433322 333333333333333344456669999999999999999999987
No 211
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.95 E-value=5.6e-29 Score=259.30 Aligned_cols=201 Identities=18% Similarity=0.169 Sum_probs=153.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..++..+.||||+++++ ++.+ ...+++++|+ .|++|.+++.. ....+++..++.|+.||+.||+|||++||+
T Consensus 58 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 133 (288)
T 3kfa_A 58 KEAAVMKEIKHPNLVQLLG-VCTR---EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133 (288)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcc---CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCcc
Confidence 4556788899999999888 5532 3456777777 57999999943 345589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.........
T Consensus 134 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---------------------------------------------- 167 (288)
T 3kfa_A 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 167 (288)
T ss_dssp CSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE----------------------------------------------
T ss_pred CCCCCcceEEEcCCCCEEEccCccceeccCCccc----------------------------------------------
Confidence 9999999999999999999999988543221000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 168 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 204 (288)
T 3kfa_A 168 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204 (288)
T ss_dssp -------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHH
Confidence 0001346889999999998899999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||.... .......+.....+.......+...+|+.+||..||.+|||+.++++
T Consensus 205 ll~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 205 IATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHTTSCCSSTTCC-GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCC-HHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 997 443322 22233333333333333333455669999999999999999999977
No 212
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.95 E-value=3.1e-29 Score=266.57 Aligned_cols=200 Identities=16% Similarity=0.154 Sum_probs=153.2
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCC---------------CCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPK---------------RSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~---------------~~l~~~~~~~i~~ 89 (712)
++..+|..+ +||||+++++ ++.+ ...+++++|+. |++|.+++.... ..+++.+++.|+.
T Consensus 74 ~E~~~l~~l~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 149 (327)
T 1fvr_A 74 GELEVLCKLGHHPNIINLLG-ACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149 (327)
T ss_dssp HHHHHHTTCCCCTTBCCEEE-EEEE---TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHH
T ss_pred HHHHHHHhccCCCchhhhce-eeee---CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHH
Confidence 345567788 9999999888 5532 34577788875 889999995543 3589999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 150 qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~--------------------------------- 196 (327)
T 1fvr_A 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--------------------------------- 196 (327)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC---------------------------------
T ss_pred HHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc---------------------------------
Confidence 99999999999999999999999999999999999999874211000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
......+++.|+|||.+.+..+
T Consensus 197 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 218 (327)
T 1fvr_A 197 ----------------------------------------------------------KKTMGRLPVRWMAIESLNYSVY 218 (327)
T ss_dssp ----------------------------------------------------------CC----CCTTTCCHHHHHHCEE
T ss_pred ----------------------------------------------------------cccCCCCCccccChhhhccccC
Confidence 0001346788999999988889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
+.++|||||||++|||++ ||..... ......+.....+.......+...+||.+||..+|.+|||+.+++++
T Consensus 219 ~~~~Di~slG~il~ellt~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 219 TTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhcchHHHHHHHHHHcCCCCCCCCCcH-HHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999996 5544332 33444444443333333444566699999999999999999999873
No 213
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=1e-28 Score=263.54 Aligned_cols=203 Identities=13% Similarity=0.158 Sum_probs=151.7
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++. ....+++++|+ .|++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 95 ~E~~~l~~l~h~~iv~~~~-~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 170 (333)
T 1mqb_A 95 GEAGIMGQFSHHNIIRLEG-VIS---KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH 170 (333)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEC---SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCCcEEE-EEe---cCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 4555788899999999888 543 23467777777 478999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++......... .+
T Consensus 171 ~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~-------------- 205 (333)
T 1mqb_A 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------TY-------------- 205 (333)
T ss_dssp SCCCGGGEEECTTCCEEECCCCC---------------------------------------------------------
T ss_pred CCCChheEEECCCCcEEECCCCcchhhcccccc-------------------------------cc--------------
Confidence 999999999999999999999988543221000 00
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|||
T Consensus 206 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 243 (333)
T 1mqb_A 206 ------------------------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 243 (333)
T ss_dssp -----------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHH
Confidence 00013457889999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ...+..+.....++......+...+++.+||..+|.+||++.++++
T Consensus 244 lt~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 244 MTYGERPYWELSN-HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HTTSCCTTTTCCH-HHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HcCCCCCcccCCH-HHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 87 5544333 2334444444333333333445569999999999999999999886
No 214
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.95 E-value=4.2e-29 Score=264.70 Aligned_cols=203 Identities=14% Similarity=0.100 Sum_probs=153.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---------CCCCChhHHHHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVY 96 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---------~~~l~~~~~~~i~~qil~~l~ 96 (712)
++..++..++||||+++++ ++.+ ...+++++|+ .|++|.+++... ...+++.+++.++.||+.||.
T Consensus 77 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 152 (322)
T 1p4o_A 77 NEASVMKEFNCHHVVRLLG-VVSQ---GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152 (322)
T ss_dssp HHHHHGGGCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEeeeEE-EEcc---CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 4566788999999999888 5432 3456777777 588999999432 134689999999999999999
Q ss_pred HhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 97 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 97 ~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
|||++||+||||||+||+++.++.+||+|||++........ +
T Consensus 153 ~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~----- 194 (322)
T 1p4o_A 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY---------------------------------Y----- 194 (322)
T ss_dssp HHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC---------------------------------E-----
T ss_pred HHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccc---------------------------------c-----
Confidence 99999999999999999999999999999998843211000 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
.......|++.|+|||.+.+..++.++|||
T Consensus 195 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 224 (322)
T 1p4o_A 195 --------------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVW 224 (322)
T ss_dssp --------------------------------------------------EGGGSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred --------------------------------------------------ccccCCCCCCCccChhhhccCCCCchhhHH
Confidence 000113568899999999988899999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||++|+|++ ||..... ......+.....+.......+...+++.+||..||.+|||+.+++++
T Consensus 225 slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 225 SFGVVLWEIATLAEQPYQGLSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHHHHHHTSCCTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCccccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999997 4543332 23333343333333333344556699999999999999999999985
No 215
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.95 E-value=2.3e-29 Score=268.16 Aligned_cols=203 Identities=16% Similarity=0.185 Sum_probs=151.1
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-------------CCCCChhHHHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHIFRQI 91 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-------------~~~l~~~~~~~i~~qi 91 (712)
++..++..+ +||||+++++ ++.. ...+++++|+ .+++|.+++... ...+++.+++.++.||
T Consensus 98 ~E~~~l~~l~~h~~iv~~~~-~~~~---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi 173 (333)
T 2i1m_A 98 SELKIMSHLGQHENIVNLLG-ACTH---GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173 (333)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCeeeEEE-EEec---CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHH
Confidence 455567777 8999999888 5532 3456777777 588999999432 2347999999999999
Q ss_pred HHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 92 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 92 l~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
+.||.|||++||+||||||+||+++.++.++|+|||++........ .
T Consensus 174 ~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~ 220 (333)
T 2i1m_A 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---------------------------------Y 220 (333)
T ss_dssp HHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT---------------------------------S
T ss_pred HHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccc---------------------------------e
Confidence 9999999999999999999999999999999999998853311100 0
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
.......|++.|+|||.+.+..++.
T Consensus 221 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 245 (333)
T 2i1m_A 221 -------------------------------------------------------IVKGNARLPVKWMAPESIFDCVYTV 245 (333)
T ss_dssp -------------------------------------------------------EECSSCEECGGGSCHHHHHHCCCCH
T ss_pred -------------------------------------------------------eecCCCCCCccccCHHHhccCCCCh
Confidence 0000135688999999999888999
Q ss_pred ccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 252 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++|||||||++|||++ ||............+.....+.......+...+++.+||+.||.+|||+.++++
T Consensus 246 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 246 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp HHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 9999999999999997 555433332333333333222222223445569999999999999999999987
No 216
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.95 E-value=2.4e-28 Score=258.39 Aligned_cols=204 Identities=18% Similarity=0.170 Sum_probs=150.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..+.||||+++++ ++.. ...+++++|+ .|++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 78 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H 153 (319)
T 2y4i_B 78 REVMAYRQTRHENVVLFMG-ACMS---PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILH 153 (319)
T ss_dssp TTGGGGTTCCCTTBCCCCE-EEEC---SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCEeEEEE-EEec---CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5666888999999999888 4432 2357777777 489999999766666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++ ++.++++|||++...+.......
T Consensus 154 ~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~--------------------------------------------- 187 (319)
T 2y4i_B 154 KDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR--------------------------------------------- 187 (319)
T ss_dssp CCCCSTTEEEC---CCEECCCSCCC-------------------------------------------------------
T ss_pred cCCChhhEEEe-CCCEEEeecCCcccccccccccc---------------------------------------------
Confidence 99999999997 78999999998754321100000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC---------CCCCCccchH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---------APVSCASDIY 256 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---------~~~~~~sDIw 256 (712)
........|++.|+|||.+.+ ..++.++|||
T Consensus 188 ----------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~ 227 (319)
T 2y4i_B 188 ----------------------------------------EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVF 227 (319)
T ss_dssp ----------------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHH
T ss_pred ----------------------------------------ccccccCCCcccccChHHhhhccccccccccCCCchhhHH
Confidence 000011458999999999875 3478999999
Q ss_pred HHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhh-hcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 257 SlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||++|||++ ||...... .....+.....+.... ...+...+++.+||..||.+|||+.++++
T Consensus 228 slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 228 ALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHH-HHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999998 66544333 3333333333333222 23345669999999999999999999988
No 217
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.95 E-value=3.1e-29 Score=261.52 Aligned_cols=202 Identities=16% Similarity=0.097 Sum_probs=150.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++... .+++++++ .+++|.+++......+++.++..++.||+.||.|||++||+|
T Consensus 70 ~e~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 144 (291)
T 1u46_A 70 REVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144 (291)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCcccEEE-EEccC----CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4555678889999999888 44322 24555555 689999999655456899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......... .
T Consensus 145 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 178 (291)
T 1u46_A 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--------------------------------Y-------------- 178 (291)
T ss_dssp SCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------E--------------
T ss_pred CCCchheEEEcCCCCEEEccccccccccccccc--------------------------------h--------------
Confidence 999999999999999999999988543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......++..|+|||.+.+..++.++|||||||++|+|
T Consensus 179 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 217 (291)
T 1u46_A 179 -----------------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217 (291)
T ss_dssp -----------------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHH
Confidence 000013568889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcc-cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.. ...++......+...+++.+||..||.+|||+.++++
T Consensus 218 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 218 FTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp HTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 97 55544333 23333322 2222222333455669999999999999999999987
No 218
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.95 E-value=2.9e-29 Score=266.54 Aligned_cols=205 Identities=14% Similarity=0.079 Sum_probs=149.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC---CCCCChhHHHHHHHHHHHHHHHhhhc-
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ- 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~---~~~l~~~~~~~i~~qil~~l~~lHs~- 101 (712)
++..+++.+.||||+++++ ++.. ....++++++ .|++|.+++... ...+++..+..|+.||+.||.|||++
T Consensus 76 ~e~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 151 (326)
T 3uim_A 76 TEVEMISMAVHRNLLRLRG-FCMT---PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 151 (326)
T ss_dssp HHHHGGGTCCCTTBCCCCE-EECC---SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHhccCCCccceEE-EEec---CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4556788999999999888 5532 2345666666 588999999543 23489999999999999999999999
Q ss_pred --CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 102 --GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 102 --gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
||+||||||+||+++.++.+||+|||++.........
T Consensus 152 ~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 190 (326)
T 3uim_A 152 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH----------------------------------------- 190 (326)
T ss_dssp SSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC-----------------------------------------
T ss_pred CCCeEeCCCchhhEEECCCCCEEeccCccccccCccccc-----------------------------------------
Confidence 9999999999999999999999999988543211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHH
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (712)
......||+.|+|||.+.+..++.++||||||
T Consensus 191 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 222 (326)
T 3uim_A 191 ------------------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG 222 (326)
T ss_dssp ------------------------------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCccCHHHhccCCCCccccchhHH
Confidence 00114589999999999888899999999999
Q ss_pred HHHHHhhCCCCCChhh----------HHHHHhhcc-cC----CC-----chhhhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 260 VLLFELFCPFSTGEEK----------TRTMSSLRH-RV----LP-----PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 260 vll~eLl~pf~~~~~~----------~~~~~~~~~-~~----~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
|++|+|+++..+.... ......... .. .. ...........+++.+||+.||.+|||+.++
T Consensus 223 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 302 (326)
T 3uim_A 223 VMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302 (326)
T ss_dssp HHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred HHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence 9999999932222110 000111000 00 00 0011112344589999999999999999999
Q ss_pred hcCcC
Q 005147 320 LQSEF 324 (712)
Q Consensus 320 L~hp~ 324 (712)
++|-.
T Consensus 303 l~~L~ 307 (326)
T 3uim_A 303 VRMLE 307 (326)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99754
No 219
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=8.3e-29 Score=263.94 Aligned_cols=207 Identities=13% Similarity=0.151 Sum_probs=145.0
Q ss_pred cceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc-----
Q 005147 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ----- 101 (712)
Q Consensus 28 ~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~----- 101 (712)
+...+..+.||||+++++.+.........+++++|+. |++|.++++.. .+++.+++.|+.||+.||.|||++
T Consensus 81 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~ 158 (337)
T 3mdy_A 81 EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158 (337)
T ss_dssp HHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTT
T ss_pred HHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 3333444699999998883332222235677888875 88999999544 389999999999999999999999
Q ss_pred ---CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCC
Q 005147 102 ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (712)
Q Consensus 102 ---gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~ 178 (712)
||+||||||+||+++.++.+||+|||++.........
T Consensus 159 ~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------- 198 (337)
T 3mdy_A 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE---------------------------------------- 198 (337)
T ss_dssp CBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------------------------------------------
T ss_pred cCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc----------------------------------------
Confidence 9999999999999999999999999998543222000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCc------
Q 005147 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA------ 252 (712)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~------ 252 (712)
.........||+.|+|||++.+..++..
T Consensus 199 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 232 (337)
T 3mdy_A 199 ----------------------------------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIM 232 (337)
T ss_dssp --------------------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHH
T ss_pred ----------------------------------------------ccCCCCCCccCcceeChhhcccccCCccccCccc
Confidence 0000011468999999999988776665
Q ss_pred cchHHHHHHHHHhhCC-------------CCCC---hhh-HHHHHhhcccCCCchhh------hcCchhHHHHHHcCCCC
Q 005147 253 SDIYRLGVLLFELFCP-------------FSTG---EEK-TRTMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPE 309 (712)
Q Consensus 253 sDIwSlGvll~eLl~p-------------f~~~---~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~L~~d 309 (712)
+|||||||++|||+++ |... ... .............+.+. ...+...+|+.+||..|
T Consensus 233 ~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 312 (337)
T 3mdy_A 233 ADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHN 312 (337)
T ss_dssp HHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSS
T ss_pred cchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhC
Confidence 9999999999999974 2111 111 11111111111111111 11233558999999999
Q ss_pred CCCCCCHHHHhcC
Q 005147 310 PSGRPKMGELLQS 322 (712)
Q Consensus 310 P~~Rpt~~eiL~h 322 (712)
|.+|||+.+++++
T Consensus 313 P~~Rps~~ell~~ 325 (337)
T 3mdy_A 313 PASRLTALRVKKT 325 (337)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCCCHHHHHHH
Confidence 9999999999874
No 220
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.95 E-value=7.8e-29 Score=258.91 Aligned_cols=201 Identities=12% Similarity=0.109 Sum_probs=152.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++ ....+++++|+ .+++|.+++.... .+++.+++.++.||+.||.|||++||+|
T Consensus 67 ~e~~~l~~l~h~~i~~~~~-~~----~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H 140 (291)
T 1xbb_A 67 AEANVMQQLDNPYIVRMIG-IC----EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNFVH 140 (291)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EE----ESSSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EE----CCCCcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhCCeEc
Confidence 4555788899999999888 44 23456677777 5899999995543 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++++|||++......... .
T Consensus 141 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~-------------- 174 (291)
T 1xbb_A 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y-------------- 174 (291)
T ss_dssp SCCSGGGEEEEETTEEEECCCTTCEECCTTCSE--------------------------------E--------------
T ss_pred CCCCcceEEEeCCCcEEEccCCcceeeccCCCc--------------------------------c--------------
Confidence 999999999999999999999988543222000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 175 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 213 (291)
T 1xbb_A 175 -----------------------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 213 (291)
T ss_dssp -----------------------------------------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHH
Confidence 000012467889999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ......+.....+.......+...+++.+||..||.+|||+.++++
T Consensus 214 ~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 214 FSYGQKPYRGMKG-SEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp HTTTCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HhcCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 97 5544333 2333444443333333333455669999999999999999999986
No 221
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.95 E-value=4.8e-29 Score=277.56 Aligned_cols=200 Identities=13% Similarity=0.135 Sum_probs=153.3
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.+.||||+++++ ++. ...+++++|+ .+++|.++|... ...+++.+++.++.||+.||+|||++||+
T Consensus 232 ~E~~~l~~l~h~~iv~l~~-~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 306 (454)
T 1qcf_A 232 AEANVMKTLQHDKLVKLHA-VVT----KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 306 (454)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEC----SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhhCCCCCEeeEEE-EEe----CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4556788899999999887 553 3356777777 589999999543 23588999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 307 HrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 340 (454)
T 1qcf_A 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYT---------------------------------------------- 340 (454)
T ss_dssp CSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH----------------------------------------------
T ss_pred CCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee----------------------------------------------
Confidence 9999999999999999999999998543111000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||++.+..++.++|||||||++||
T Consensus 341 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~e 377 (454)
T 1qcf_A 341 -------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 377 (454)
T ss_dssp -------------------------------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHH
Confidence 0000245778999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||...... .....+.....++......+...+|+.+||..||.+|||+.+|++
T Consensus 378 l~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 378 IVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 998 66544332 333444443333333334455669999999999999999999876
No 222
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.7e-28 Score=282.59 Aligned_cols=202 Identities=13% Similarity=0.118 Sum_probs=154.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.++||||+++++ ++.. ..+++++|+ .|++|.++|......+++.+++.|+.||+.||+|||++||+|
T Consensus 385 ~E~~il~~l~hpniv~l~~-~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH 459 (613)
T 2ozo_A 385 REAQIMHQLDNPYIVRLIG-VCQA----EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459 (613)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEES----SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-Eecc----CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 4555788899999999988 5533 346777777 589999999766666999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++..+..... +
T Consensus 460 rDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------~-------------- 493 (613)
T 2ozo_A 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y-------------- 493 (613)
T ss_dssp SCCSGGGEEEEETTEEEECCCSTTTTCC----------------------------------------------------
T ss_pred CcCCHHHEEEcCCCcEEEeeccCcccccCCCce--------------------------------e--------------
Confidence 999999999999999999999998654322000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+++.|+|||++.+..++.++|||||||++|||
T Consensus 494 -----------------------------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~el 532 (613)
T 2ozo_A 494 -----------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 532 (613)
T ss_dssp -------------------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 000002357889999999988999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||..... ...+..+..+..++......+...+|+.+||..+|.+|||+.++++
T Consensus 533 lt~G~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 533 LSYGQKPYKKMKG-PEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HTTSCCTTTTCCS-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HHCCCCCCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 97 6654433 2344444444333333334456669999999999999999999865
No 223
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1.8e-28 Score=258.71 Aligned_cols=200 Identities=16% Similarity=0.185 Sum_probs=144.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..++..++||||+++++ ++.. ...+++++|+ .|++|.+++.... .+++.+++.++.||+.||.|||++||+|
T Consensus 83 ~e~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H 157 (309)
T 2h34_A 83 REARTAGRLQEPHVVPIHD-FGEI---DGQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGATH 157 (309)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEEE---TTEEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhhcCCCCeeEEEE-EEee---CCeEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcCCc
Confidence 4556788899999999888 4432 3456777777 5789999995443 4899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++.........
T Consensus 158 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------------- 190 (309)
T 2h34_A 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLT----------------------------------------------- 190 (309)
T ss_dssp SCCCGGGEEECTTSCEEECSCCC---------------------------------------------------------
T ss_pred CCCChHHEEEcCCCCEEEecCccCccccccccc-----------------------------------------------
Confidence 999999999999999999999988433211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 191 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 228 (309)
T 2h34_A 191 ------------------------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYEC 228 (309)
T ss_dssp ------------------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHH
Confidence 00114689999999999998899999999999999999
Q ss_pred hC---CCCCChhhHHHHHhhcccCCC-chhhhcC-chhHHHHHHcCCCCCCCCC-CHHHHhc
Q 005147 266 FC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKF-PKEASFCLWLLHPEPSGRP-KMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~li~~~L~~dP~~Rp-t~~eiL~ 321 (712)
++ ||...... .....+.....+ ....... +...++|.+||..||.+|| +++++++
T Consensus 229 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 229 LTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 98 66554433 222222222222 2222333 4455999999999999999 8888776
No 224
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.95 E-value=1.1e-28 Score=277.50 Aligned_cols=201 Identities=18% Similarity=0.170 Sum_probs=153.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.+.||||+++++ ++.. ...++++||+ .+++|.++|+. ....+++..++.|+.||+.||+|||++||+
T Consensus 265 ~E~~~l~~l~hpniv~l~~-~~~~---~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 340 (495)
T 1opk_A 265 KEAAVMKEIKHPNLVQLLG-VCTR---EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 340 (495)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCEeeEEE-EEec---CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4555788899999999888 5532 3456777777 58999999954 344589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 341 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 374 (495)
T 1opk_A 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 374 (495)
T ss_dssp CSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE----------------------------------------------
T ss_pred cCCCChhhEEECCCCcEEEeecccceeccCCcee----------------------------------------------
Confidence 9999999999999999999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||++.+..++.++|||||||++||
T Consensus 375 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~e 411 (495)
T 1opk_A 375 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 411 (495)
T ss_dssp -------------------------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred -------------------------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHH
Confidence 0000345778999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+......+......+...+||.+||+.||.+|||+.+|++
T Consensus 412 l~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 412 IATYGMSPYPGIDL-SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHTTSCCSSTTCCG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 997 5544332 2333334333333322333455669999999999999999999987
No 225
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.95 E-value=9.8e-29 Score=263.08 Aligned_cols=214 Identities=18% Similarity=0.258 Sum_probs=136.6
Q ss_pred ccceeeccC-CCCCcccccccccc----cccccCceEEEEeeCCccHHHhhcC--CCCCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCE----NEAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~----~~~~~~~~~l~~e~~g~sL~~~l~~--~~~~l~~~~~~~i~~qil~~l~~lH 99 (712)
++..++..+ +||||+++++.+.. .......+++++|+.+++|.+++.. ....+++.+++.|+.||+.||.|||
T Consensus 74 ~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 74 QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344456666 59999998873311 1233446899999999999999843 3345999999999999999999999
Q ss_pred hcC--ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 100 SQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 100 s~g--IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
++| |+||||||+||+++.++.+||+|||++...+...... + .
T Consensus 154 ~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~-------------------------------~--~--- 197 (337)
T 3ll6_A 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-------------------------------W--S--- 197 (337)
T ss_dssp TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----------------------------------------
T ss_pred hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCccc-------------------------------c--c---
Confidence 999 9999999999999999999999999986543321000 0 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccc---cCCCCCCccc
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASD 254 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~~~~sD 254 (712)
. .............|++.|+|||++ .+..++.++|
T Consensus 198 --------~----------------------------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~D 235 (337)
T 3ll6_A 198 --------A----------------------------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQD 235 (337)
T ss_dssp --------------------------------------------------------------------CCTTSCSSHHHH
T ss_pred --------c----------------------------------cccccchhhccccCCCCcCChhhhhccccCCCChHHh
Confidence 0 000000001124689999999998 5666899999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||||||++|+|++ ||...... . .+......+......+...+|+.+||..||.+|||+.+++++
T Consensus 236 v~slG~il~el~~g~~p~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 236 IWALGCILYLLCFRQHPFEDGAKL-R---IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp HHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcchhHH-H---hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999998 55432221 1 111111112222233556699999999999999999999885
No 226
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.95 E-value=7.7e-29 Score=266.50 Aligned_cols=212 Identities=11% Similarity=0.036 Sum_probs=150.8
Q ss_pred ccceeeccCCCCCcccccccccc-----------c-ccccCceEEEEeeCCccHHHhhcCC-CCCCChhHHHHHHHHHHH
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCE-----------N-EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVE 93 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~-----------~-~~~~~~~~l~~e~~g~sL~~~l~~~-~~~l~~~~~~~i~~qil~ 93 (712)
++..++..+.||||++++..... . ......+++++|+.|++|.+++... ...+++.+++.|+.||+.
T Consensus 91 ~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 170 (352)
T 2jii_A 91 NEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLD 170 (352)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHH
Confidence 44556888899999874331110 0 1124567888898899999999543 355999999999999999
Q ss_pred HHHHhhhcCceeccCCCCceeecCCC--cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccccc
Q 005147 94 IVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 171 (712)
Q Consensus 94 ~l~~lHs~gIvHrDLkP~NIll~~~~--~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df 171 (712)
||.|||++||+||||||+||+++.++ .+||+|||+++......... .+
T Consensus 171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~------------------------------~~ 220 (352)
T 2jii_A 171 ALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHV------------------------------AY 220 (352)
T ss_dssp HHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCC------------------------------CC
T ss_pred HHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccc------------------------------cc
Confidence 99999999999999999999999888 89999999986542210000 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCC
Q 005147 172 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 251 (712)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 251 (712)
.........||+.|+|||.+.+..++.
T Consensus 221 -----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ 247 (352)
T 2jii_A 221 -----------------------------------------------------VEGSRSPHEGDLEFISMDLHKGCGPSR 247 (352)
T ss_dssp -----------------------------------------------------CTTSSCTTCSCTTTCCHHHHTTCCCCH
T ss_pred -----------------------------------------------------cccccccccCCccccCHHHHccCCCCc
Confidence 000001147899999999999989999
Q ss_pred ccchHHHHHHHHHhhC---CCCCChhhHHHHHhhc---ccCCCchh------hhcCchhHHHHHHcCCCCCCCCCCHHHH
Q 005147 252 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR---HRVLPPQL------LLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~---pf~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (712)
++|||||||++|||++ ||.........+.... ....+... ....+...+|+.+||..||.+|||+.++
T Consensus 248 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 327 (352)
T 2jii_A 248 RSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAML 327 (352)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence 9999999999999999 5544321111111111 11111111 1123455699999999999999999999
Q ss_pred hc
Q 005147 320 LQ 321 (712)
Q Consensus 320 L~ 321 (712)
++
T Consensus 328 ~~ 329 (352)
T 2jii_A 328 RN 329 (352)
T ss_dssp HH
T ss_pred HH
Confidence 77
No 227
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=7e-29 Score=264.64 Aligned_cols=212 Identities=12% Similarity=0.099 Sum_probs=146.2
Q ss_pred eccceeeccCCCCCcccccccccc-cccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc--
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-- 101 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~-~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~-- 101 (712)
+.+...+..+.||||+++++.... .......+++++|+. |++|.+++.... .++..+..|+.||+.||.|||++
T Consensus 55 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~ 132 (336)
T 3g2f_A 55 EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELP 132 (336)
T ss_dssp HHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhc
Confidence 344444667999999998862221 122333577888885 889999995443 58899999999999999999999
Q ss_pred -------CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 102 -------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 102 -------gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
||+||||||+|||++.++.+||+|||++...........
T Consensus 133 ~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~---------------------------------- 178 (336)
T 3g2f_A 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP---------------------------------- 178 (336)
T ss_dssp CGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC------------------------------------
T ss_pred cccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc----------------------------------
Confidence 999999999999999999999999999855422210000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC-------C
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------A 247 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~ 247 (712)
. ..........||+.|+|||++.+ .
T Consensus 179 -----------~-------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 210 (336)
T 3g2f_A 179 -----------G-------------------------------------EEDNAAISEVGTIRYMAPEVLEGAVNLRDXE 210 (336)
T ss_dssp -------------------------------------------------------CCTTSCGGGCCHHHHTTCCCGGGHH
T ss_pred -----------c-------------------------------------ccccccccCCCccceeCchhhcCCccccccc
Confidence 0 00000112468999999999987 3
Q ss_pred CCCCccchHHHHHHHHHhhC---CCCCChhh-----------------HHHHHhhcccCCCchhhhcC-------chhHH
Q 005147 248 PVSCASDIYRLGVLLFELFC---PFSTGEEK-----------------TRTMSSLRHRVLPPQLLLKF-------PKEAS 300 (712)
Q Consensus 248 ~~~~~sDIwSlGvll~eLl~---pf~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~-------~~~~~ 300 (712)
.++.++|||||||++|||++ ||++.... .............+.+...+ +...+
T Consensus 211 ~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (336)
T 3g2f_A 211 SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKE 290 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHH
Confidence 46789999999999999997 44332110 01111111111111222211 23569
Q ss_pred HHHHcCCCCCCCCCCHHHHhc
Q 005147 301 FCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 301 li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||.+||..||++|||+.|+++
T Consensus 291 li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 291 TIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp HHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCChhhCcchHHHHH
Confidence 999999999999999999966
No 228
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=6.9e-29 Score=263.88 Aligned_cols=206 Identities=18% Similarity=0.154 Sum_probs=150.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.+.||||+++++ ++.. .....+++++|+ .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 91 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 168 (326)
T 2w1i_A 91 REIEILKSLQHDNIVKYKG-VCYS-AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 168 (326)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECC-----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCeeeEEE-EEEe-cCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 5556788899999999888 4432 223356777777 588999999665556999999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++......... +
T Consensus 169 ~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~-------------- 202 (326)
T 2w1i_A 169 RDLATRNILVENENRVKIGDFGLTKVLPQDKEY--------------------------------Y-------------- 202 (326)
T ss_dssp SCCCGGGEEEEETTEEEECCCTTCEECCSSCSE--------------------------------E--------------
T ss_pred cCCCcceEEEcCCCcEEEecCcchhhccccccc--------------------------------c--------------
Confidence 999999999999999999999988543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
. ......++..|+|||.+.+..++.++|||||||++|||
T Consensus 203 ---------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 241 (326)
T 2w1i_A 203 ---------------------K--------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241 (326)
T ss_dssp ---------------------E--------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred ---------------------c--------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHH
Confidence 0 00013467889999999888899999999999999999
Q ss_pred hCCCCCChhhH------------------HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FCPFSTGEEKT------------------RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~pf~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+++..+..... .....+.....++......+...++|.+||..||.+|||+.++++
T Consensus 242 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 242 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99432221110 111122222222222233455669999999999999999999986
No 229
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.95 E-value=1.4e-28 Score=262.31 Aligned_cols=202 Identities=16% Similarity=0.165 Sum_probs=152.0
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC---------------CCCChhHHHHHHH
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 89 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~---------------~~l~~~~~~~i~~ 89 (712)
++..++..+ +||||+++++ ++.. ...+++++|+ .|++|.+++.... ..+++.+++.++.
T Consensus 89 ~E~~~l~~l~~hp~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 164 (334)
T 2pvf_A 89 SEMEMMKMIGKHKNIINLLG-ACTQ---DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 164 (334)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECS---SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCEeeEEE-EEcc---CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHH
Confidence 444566677 8999999888 5532 3456777777 5889999995432 2488999999999
Q ss_pred HHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhcccc
Q 005147 90 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 169 (712)
Q Consensus 90 qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (712)
||+.||.|||++||+||||||+||+++.++.+||+|||++...+.....
T Consensus 165 qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------------------------------- 213 (334)
T 2pvf_A 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY------------------------------- 213 (334)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSE-------------------------------
T ss_pred HHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999988543221000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCC
Q 005147 170 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 249 (712)
Q Consensus 170 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 249 (712)
.......+++.|+|||++.+..+
T Consensus 214 ---------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 236 (334)
T 2pvf_A 214 ---------------------------------------------------------KKTTNGRLPVKWMAPEALFDRVY 236 (334)
T ss_dssp ---------------------------------------------------------ECCSCCCCCGGGCCHHHHHHCEE
T ss_pred ---------------------------------------------------------cccCCCCcccceeChHHhcCCCc
Confidence 00001346889999999988889
Q ss_pred CCccchHHHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 250 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 250 ~~~sDIwSlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+.++|||||||++|+|++ ||.... .......+.....+.......+...+++.+||..+|.+|||+.++++
T Consensus 237 ~~~~Di~slG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 237 THQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCcCcCC-HHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999997 554332 22333444443333333334455669999999999999999999987
No 230
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.95 E-value=8.9e-29 Score=275.17 Aligned_cols=206 Identities=13% Similarity=0.132 Sum_probs=153.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+++.++||||+++++ ++.+ ..+++++|+ .+++|.++|.. .+..+++.+++.++.||+.||+|||++||+
T Consensus 228 ~E~~~l~~l~hp~iv~~~~-~~~~----~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 302 (452)
T 1fmk_A 228 QEAQVMKKLRHEKLVQLYA-VVSE----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302 (452)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS----SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEcC----CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4556788899999999887 5532 456777777 58899999953 234589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 303 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~---------------------------------------------- 336 (452)
T 1fmk_A 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYT---------------------------------------------- 336 (452)
T ss_dssp CSCCSGGGEEECGGGCEEECCCCTTC------------------------------------------------------
T ss_pred CCCCChhhEEECCCCCEEECCCccceecCCCcee----------------------------------------------
Confidence 9999999999999999999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 337 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~e 373 (452)
T 1fmk_A 337 -------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373 (452)
T ss_dssp -------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHH
Confidence 0001345788999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc--CcCCCC
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 327 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~--hp~~~~ 327 (712)
|++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++ ..++..
T Consensus 374 l~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 374 LTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 998 55543332 333444443333322333445569999999999999999999987 345543
No 231
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.95 E-value=5.9e-29 Score=264.44 Aligned_cols=206 Identities=14% Similarity=0.135 Sum_probs=153.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCC------CCCChhHHHHHHHHHHHHHHHhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAH 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~------~~l~~~~~~~i~~qil~~l~~lH 99 (712)
++..++..++||||+++++ ++.. ...+++++|+. |++|.+++.... ..+++.+++.++.||+.||.|||
T Consensus 82 ~E~~~l~~l~h~~iv~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH 157 (327)
T 2yfx_A 82 MEALIISKFNHQNIVRCIG-VSLQ---SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157 (327)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCCCeEEE-EEcC---CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh
Confidence 4556788899999999888 4432 33567777775 999999994432 34889999999999999999999
Q ss_pred hcCceeccCCCCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccC
Q 005147 100 SQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~ 176 (712)
++||+||||||+||+++. ...++|+|||++.........
T Consensus 158 ~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 199 (327)
T 2yfx_A 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-------------------------------------- 199 (327)
T ss_dssp HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------------------------------------------
T ss_pred hCCeecCcCCHhHEEEecCCCcceEEECcccccccccccccc--------------------------------------
Confidence 999999999999999984 446999999987432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchH
Q 005147 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256 (712)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIw 256 (712)
.......|++.|+|||.+.+..++.++|||
T Consensus 200 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 229 (327)
T 2yfx_A 200 --------------------------------------------------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229 (327)
T ss_dssp ----------------------------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHH
T ss_pred --------------------------------------------------ccCCCcCCCcceeCHhHhcCCCCCchhhHH
Confidence 000114578999999999888899999999
Q ss_pred HHHHHHHHhhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 257 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 257 SlGvll~eLl~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
||||++|+|++ ||..... ......+.....+.......+...++|.+||..||.+|||+.+++++.++
T Consensus 230 slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 230 SFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCcCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 99999999997 4543332 23333333333333223334556699999999999999999999998654
No 232
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.95 E-value=1.4e-28 Score=255.28 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=151.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~-~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|..+.||||+++++ ++. ...+++++++ .|++|.+++.... ..+++.+++.++.||+.||.|||++||+
T Consensus 57 ~E~~~l~~l~h~~i~~~~~-~~~----~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 131 (279)
T 1qpc_A 57 AEANLMKQLQHQRLVRLYA-VVT----QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYI 131 (279)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEC----SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCcCcceEEE-EEc----CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4556788899999999887 443 2345666666 5899999995432 2589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||+++.++.++++|||++.........
T Consensus 132 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------------- 165 (279)
T 1qpc_A 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYT---------------------------------------------- 165 (279)
T ss_dssp CSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE----------------------------------------------
T ss_pred ccCCCHhhEEEcCCCCEEECCCcccccccCcccc----------------------------------------------
Confidence 9999999999999999999999988543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 166 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 202 (279)
T 1qpc_A 166 -------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202 (279)
T ss_dssp -------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHH
Confidence 0001346788999999988889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|++ ||..... ......+.....+.......+...+++.+||..+|.+|||+.++++
T Consensus 203 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 203 IVTHGRIPYPGMTN-PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHTTTCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhCCCCCCcccCH-HHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 997 5544333 2333444333332222233445569999999999999999999886
No 233
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.95 E-value=1.2e-28 Score=261.02 Aligned_cols=204 Identities=18% Similarity=0.124 Sum_probs=151.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|+.+.||||+++++ ++.+ .....+++++|+. +++|.+++.... +++.+++.|+.||+.||.|||++||+|
T Consensus 82 ~E~~~l~~l~h~~iv~~~~-~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ivH 157 (318)
T 3lxp_A 82 QEIDILRTLYHEHIIKYKG-CCED-AGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIH 157 (318)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEE-TTTTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCcchhhEEE-EEec-CCCceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 4556788899999999888 4433 2345677788874 889999995543 899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.++|+|||++......... +
T Consensus 158 ~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~-------------- 191 (318)
T 3lxp_A 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y-------------- 191 (318)
T ss_dssp SCCSGGGEEECTTCCEEECCGGGCEECCTTCSE--------------------------------E--------------
T ss_pred CCCchheEEEcCCCCEEECCccccccccccccc--------------------------------c--------------
Confidence 999999999999999999999998543221000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 192 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 230 (318)
T 3lxp_A 192 -----------------------------------------RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230 (318)
T ss_dssp -----------------------------------------EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence 000113578899999999988899999999999999999
Q ss_pred hCC---CCCChhh--------------HHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FCP---FSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~p---f~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+++ |...... ......+.....++......+...+||.+||..||.+|||+.++++
T Consensus 231 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 993 3322111 0111222222222333333455669999999999999999999986
No 234
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.95 E-value=2.2e-28 Score=279.44 Aligned_cols=210 Identities=16% Similarity=0.146 Sum_probs=152.2
Q ss_pred ccceeeccCCCCCcccccccccccc---cccCceEEEEee-CCccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhh
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHS 100 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~---~~~~~~~l~~e~-~g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs 100 (712)
++..+|..++||||+.+++ ++... .....+++++|+ .|++|.+++.... ..+++.+++.|+.||+.||+|||+
T Consensus 61 ~Ei~iL~~L~HpnIV~l~~-v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs 139 (676)
T 3qa8_A 61 LEIQIMKKLNHPNVVSARE-VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139 (676)
T ss_dssp HHHHHHHHCCBTTBCCEEE-CCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCceee-eecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566788899999999887 44321 124456677777 5999999995432 358999999999999999999999
Q ss_pred cCceeccCCCCceeecCCCc---EEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCC
Q 005147 101 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (712)
Q Consensus 101 ~gIvHrDLkP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~ 177 (712)
+||+||||||+||+++.++. ++++|||.+...+....
T Consensus 140 ~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~---------------------------------------- 179 (676)
T 3qa8_A 140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---------------------------------------- 179 (676)
T ss_dssp TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC----------------------------------------
T ss_pred CCCccCCCCHHHeEeecCCCceeEEEcccccccccccccc----------------------------------------
Confidence 99999999999999997665 89999998854321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHH
Q 005147 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (712)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (712)
.....|++.|+|||.+.+..++.++||||
T Consensus 180 ---------------------------------------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIwS 208 (676)
T 3qa8_A 180 ---------------------------------------------------CTEFVGTLQYLAPELLEQKKYTVTVDYWS 208 (676)
T ss_dssp ---------------------------------------------------CCCCCSCCTTCSSCSSCCSCCSTTHHHHH
T ss_pred ---------------------------------------------------cccccCCcccCChHHhccCCCCchhHHHH
Confidence 01146899999999999999999999999
Q ss_pred HHHHHHHhhC---CCCCChhhHHHHHhhc-------------cc--------CCCchhhhcC-chhHHHHHHcCCCCCCC
Q 005147 258 LGVLLFELFC---PFSTGEEKTRTMSSLR-------------HR--------VLPPQLLLKF-PKEASFCLWLLHPEPSG 312 (712)
Q Consensus 258 lGvll~eLl~---pf~~~~~~~~~~~~~~-------------~~--------~~~~~~~~~~-~~~~~li~~~L~~dP~~ 312 (712)
|||++|+|++ ||.+..........+. .+ ..|..+.... +...+||.+||..||.+
T Consensus 209 LGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~k 288 (676)
T 3qa8_A 209 FGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQ 288 (676)
T ss_dssp HHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC-
T ss_pred HHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhh
Confidence 9999999999 6654322211100000 00 0011111122 23448999999999999
Q ss_pred CCCHHHHhcCcCCCCC
Q 005147 313 RPKMGELLQSEFLNEP 328 (712)
Q Consensus 313 Rpt~~eiL~hp~~~~~ 328 (712)
|||+.++|+||||+..
T Consensus 289 RPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 289 RGTDPQNPNVGCFQAL 304 (676)
T ss_dssp --CCTTCCCCTTHHHH
T ss_pred CcCHHHHhcCHHHHHH
Confidence 9999999999998764
No 235
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.95 E-value=2e-28 Score=258.82 Aligned_cols=214 Identities=13% Similarity=0.144 Sum_probs=151.1
Q ss_pred ccceeeccCCCCCcccccccccc-cccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~-~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~ 101 (712)
++..++..++||||+++++ ++. .......+++++|+ .+++|.+++.. .+..+++.+++.++.||+.||.|||++
T Consensus 75 ~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 153 (317)
T 2buj_A 75 READMHRLFNHPNILRLVA-YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153 (317)
T ss_dssp HHHHHHHTCCCTTBCCCCE-EEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhcCCCCeeeEEE-EEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4556788899999999988 443 22233456677776 58899999843 345699999999999999999999999
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.++++|||++.......... .
T Consensus 154 ~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~-----------------------~------------------ 192 (317)
T 2buj_A 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS-----------------------R------------------ 192 (317)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESH-----------------------H------------------
T ss_pred CcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccc-----------------------c------------------
Confidence 99999999999999999999999999874321110000 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC---CCCccchHHH
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRL 258 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSl 258 (712)
..... .......|++.|+|||.+.+.. ++.++|||||
T Consensus 193 ----------------------~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl 232 (317)
T 2buj_A 193 ----------------------QALTL------------------QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232 (317)
T ss_dssp ----------------------HHHHH------------------HHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHH
T ss_pred ----------------------ccccc------------------cccccccCCcccCCHhHhccCCCcCCCchhhHHHH
Confidence 00000 0001146799999999997665 6899999999
Q ss_pred HHHHHHhhCCCCCChhhH----HHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC
Q 005147 259 GVLLFELFCPFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (712)
Q Consensus 259 Gvll~eLl~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h 322 (712)
||++|+|+++..+..... .....+......+......+...++|.+||..||.+|||+.+++++
T Consensus 233 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 233 GCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 999999999433332110 1111112222222222334556699999999999999999999985
No 236
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.95 E-value=2.4e-28 Score=272.86 Aligned_cols=208 Identities=17% Similarity=0.175 Sum_probs=151.8
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceec
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHr 106 (712)
++..++..+.|++++..+..++ .....++++||+.|++|.+++......+++.+++.|+.||+.||+|||++|||||
T Consensus 51 ~E~~il~~L~~~~~i~~i~~~~---~~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr 127 (483)
T 3sv0_A 51 YESKIYRILQGGTGIPNVRWFG---VEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHR 127 (483)
T ss_dssp HHHHHHHHTTTSTTCCCEEEEE---EETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHHHhcCCCCCCeEEEEE---eeCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 3445677788877666555232 3445678999999999999996555569999999999999999999999999999
Q ss_pred cCCCCceee---cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 107 NVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 107 DLkP~NIll---~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
||||+|||| +..+.+||+|||+++..........
T Consensus 128 DIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~------------------------------------------- 164 (483)
T 3sv0_A 128 DIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH------------------------------------------- 164 (483)
T ss_dssp CCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-------------------------------------------
T ss_pred ccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc-------------------------------------------
Confidence 999999999 5889999999999865422210000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcc-cccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM-KQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
.+. ......||+.|+|||.+.+..++.++|||||||+|
T Consensus 165 -----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil 203 (483)
T 3sv0_A 165 -----------------------------------------IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVL 203 (483)
T ss_dssp -----------------------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHH
Confidence 000 00125789999999999999999999999999999
Q ss_pred HHhhC---CCCCChh--hHHHHHhhccc---CCCchhhhcC-chhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEE--KTRTMSSLRHR---VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~--~~~~~~~~~~~---~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|||++ ||..... ....+..+... .....+...+ +...+|+.+||..+|.+||++.+|++
T Consensus 204 ~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 204 MYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99998 6654221 11122221111 1112222333 34559999999999999999998876
No 237
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.95 E-value=2.1e-28 Score=282.71 Aligned_cols=201 Identities=13% Similarity=0.116 Sum_probs=152.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+|..++||||+++++ ++.. ..++++||+ .+++|.++|... ..+++.+++.|+.||+.||+|||++||||
T Consensus 419 ~E~~il~~l~hpnIv~l~~-~~~~----~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~iiH 492 (635)
T 4fl3_A 419 AEANVMQQLDNPYIVRMIG-ICEA----ESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFVH 492 (635)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEES----SSEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEec----CCEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeC
Confidence 3455688899999999988 6532 346677777 589999999544 34899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||||+.++.+||+|||+++........ .
T Consensus 493 rDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~--------------------------------~-------------- 526 (635)
T 4fl3_A 493 RDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y-------------- 526 (635)
T ss_dssp SCCSGGGEEEEETTEEEECCTTHHHHTTC---------------------------------------------------
T ss_pred CCCChHhEEEeCCCCEEEEEcCCccccccCccc--------------------------------c--------------
Confidence 999999999999999999999998543222000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
.......+++.|+|||++.+..++.++|||||||++|||
T Consensus 527 -----------------------------------------~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~el 565 (635)
T 4fl3_A 527 -----------------------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 565 (635)
T ss_dssp -------------------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 000113467889999999998999999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... .....+.....+.......+...+||.+||..||++|||+.+|++
T Consensus 566 lt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 566 FSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 97 56544332 344444444333333334455669999999999999999999976
No 238
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=268.38 Aligned_cols=202 Identities=15% Similarity=0.174 Sum_probs=148.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCC--CCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~--~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|..++||||+++++ ++.. .....+++++|+. |++|.+++.... ..+++.+++.|+.||+.||+|||++||
T Consensus 56 ~E~~~l~~l~hpnIv~~~~-~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 133 (396)
T 4eut_A 56 REFEVLKKLNHKNIVKLFA-IEEE-TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133 (396)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEEC-TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCCCCeEEE-eecc-CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 5566788999999999988 4433 2344667777775 899999995432 238999999999999999999999999
Q ss_pred eeccCCCCceee----cCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCC
Q 005147 104 VVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (712)
Q Consensus 104 vHrDLkP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~ 179 (712)
+||||||+||++ +..+.+||+|||+++......
T Consensus 134 vH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~------------------------------------------- 170 (396)
T 4eut_A 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------- 170 (396)
T ss_dssp ECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG-------------------------------------------
T ss_pred EECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC-------------------------------------------
Confidence 999999999999 677789999999885432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccC--------CCCCC
Q 005147 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--------APVSC 251 (712)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~ 251 (712)
......||+.|+|||++.+ ..++.
T Consensus 171 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~ 202 (396)
T 4eut_A 171 ------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGA 202 (396)
T ss_dssp ------------------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHH
T ss_pred ------------------------------------------------ccccccCCccccCHHHhhccccccccccCCCc
Confidence 0001468999999999865 45788
Q ss_pred ccchHHHHHHHHHhhC---CCCCC---hhhHHHHHhhcccCCCch-----------------------hhhcC-chhHHH
Q 005147 252 ASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPPQ-----------------------LLLKF-PKEASF 301 (712)
Q Consensus 252 ~sDIwSlGvll~eLl~---pf~~~---~~~~~~~~~~~~~~~~~~-----------------------~~~~~-~~~~~l 301 (712)
++|||||||++|||++ ||.+. ......+..+.....+.. +.... +...++
T Consensus 203 ~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l 282 (396)
T 4eut_A 203 TVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPV 282 (396)
T ss_dssp HHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHH
Confidence 9999999999999998 55432 222333433333222110 00111 233489
Q ss_pred HHHcCCCCCCCCCCHHHHhc
Q 005147 302 CLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 302 i~~~L~~dP~~Rpt~~eiL~ 321 (712)
+.+||..||++|||+.++++
T Consensus 283 l~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 283 LANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HHHHSCCCTTTSCCHHHHHH
T ss_pred HHHhhccChhhhccHHHHHH
Confidence 99999999999999999866
No 239
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.95 E-value=8.5e-28 Score=252.22 Aligned_cols=183 Identities=17% Similarity=0.250 Sum_probs=136.0
Q ss_pred ccCCCCCccccccccccc-ccccCceEEEEeeC-CccHHHhhcCC-CCCCChhHHHHHHHHHHHHHHHhhhcCceeccCC
Q 005147 33 THGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWG-DVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (712)
Q Consensus 33 ~~~~H~ni~~~~~~~~~~-~~~~~~~~l~~e~~-g~sL~~~l~~~-~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLk 109 (712)
...+||||+++++ ++.. ......+++++|+. |++|.+++... ...+++.+++.|+.||+.||.|||++||+|||||
T Consensus 66 ~~~~h~~i~~~~~-~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlk 144 (299)
T 3m2w_A 66 RASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144 (299)
T ss_dssp HHTTSTTBCCEEE-EEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred HhccCCCchhHHh-hhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 6679999999888 4432 22345678888875 78999999443 3469999999999999999999999999999999
Q ss_pred CCceeecC---CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccccc
Q 005147 110 PSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (712)
Q Consensus 110 P~NIll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~ 186 (712)
|+||+++. ++.++++|||++...
T Consensus 145 p~Nil~~~~~~~~~~kl~Dfg~a~~~------------------------------------------------------ 170 (299)
T 3m2w_A 145 PENLLYTSKRPNAILKLTDFGFAKET------------------------------------------------------ 170 (299)
T ss_dssp GGGEEESSSSTTCCEEECCCTTCEEC------------------------------------------------------
T ss_pred HHHEEEecCCCCCcEEEecccccccc------------------------------------------------------
Confidence 99999997 788999999877211
Q ss_pred ccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHhh
Q 005147 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (712)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eLl 266 (712)
.+..++.++|||||||++|||+
T Consensus 171 ----------------------------------------------------------~~~~~~~~~DiwslG~il~el~ 192 (299)
T 3m2w_A 171 ----------------------------------------------------------TGEKYDKSCDMWSLGVIMYILL 192 (299)
T ss_dssp ----------------------------------------------------------TTCGGGGHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------ccccCCchhhHHHHHHHHHHHH
Confidence 0133678999999999999999
Q ss_pred C---CCCCChhhHHHHHhhcc----c--CCCchh-hhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCCCc
Q 005147 267 C---PFSTGEEKTRTMSSLRH----R--VLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (712)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~----~--~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~~~ 329 (712)
+ ||....... ....... . ..+... ....+...+|+.+||..||.+|||+.++|+||||+...
T Consensus 193 tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 193 CGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HCCCCCCCCcchh-hhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 8 554332211 1111111 1 111111 22344556999999999999999999999999998654
No 240
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.95 E-value=6.3e-28 Score=254.33 Aligned_cols=201 Identities=17% Similarity=0.220 Sum_probs=146.4
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC---CCCCCChhHHHHHHHHHHHHHHHhhhcC
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~---~~~~l~~~~~~~i~~qil~~l~~lHs~g 102 (712)
++..++..++||||+++++ ++.. ...+++++|+ .+++|.+++.. ....+++.+++.++.||+.||.|||++|
T Consensus 81 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 156 (310)
T 2wqm_A 81 KEIDLLKQLNHPNVIKYYA-SFIE---DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156 (310)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEc---CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4566788899999999887 4422 3456777777 57899999842 3455899999999999999999999999
Q ss_pred ceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~ 182 (712)
|+||||||+||+++.++.++|+|||++........
T Consensus 157 i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 191 (310)
T 2wqm_A 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--------------------------------------------- 191 (310)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCC--------------------------------------------------------
T ss_pred eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc---------------------------------------------
Confidence 99999999999999999999999998743211100
Q ss_pred ccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHH
Q 005147 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (712)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll 262 (712)
......|++.|+|||.+.+..++.++|||||||++
T Consensus 192 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 226 (310)
T 2wqm_A 192 ---------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 226 (310)
T ss_dssp ----------------------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHH
Confidence 00014679999999999998999999999999999
Q ss_pred HHhhC---CCCCChh-hHHHHHhhcccCCCchhhhc-CchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 263 FELFC---PFSTGEE-KTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 263 ~eLl~---pf~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
|+|++ ||..... .......+.....++..... .+...+++.+||..||.+|||+.++++
T Consensus 227 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 227 YEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999 5654321 22233334444444333233 344569999999999999999999987
No 241
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.95 E-value=2.6e-28 Score=277.05 Aligned_cols=207 Identities=13% Similarity=0.122 Sum_probs=156.0
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC-CCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~-~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
++..+|+.++||||+++++ ++.+ ..++++||+ .+++|.++|.. .+..+++.+++.|+.||+.||+|||++||+
T Consensus 311 ~E~~~l~~l~hpniv~~~~-~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iv 385 (535)
T 2h8h_A 311 QEAQVMKKLRHEKLVQLYA-VVSE----EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 385 (535)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS----SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeEEE-EEee----ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4556788899999999987 5532 456777777 58899999953 234589999999999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+|||++.++.+||+|||+++........
T Consensus 386 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---------------------------------------------- 419 (535)
T 2h8h_A 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYT---------------------------------------------- 419 (535)
T ss_dssp CSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH----------------------------------------------
T ss_pred CCCCCHhhEEEcCCCcEEEcccccceecCCCcee----------------------------------------------
Confidence 9999999999999999999999998543211000
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
......++..|+|||++.+..++.++|||||||+|||
T Consensus 420 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~e 456 (535)
T 2h8h_A 420 -------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 456 (535)
T ss_dssp -------------------------------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0000345788999999998889999999999999999
Q ss_pred hhC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcC--cCCCCC
Q 005147 265 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS--EFLNEP 328 (712)
Q Consensus 265 Ll~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~h--p~~~~~ 328 (712)
|++ ||..... ......+......+......+...+||.+||..||++|||+.+|++. .++...
T Consensus 457 l~t~g~~P~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 457 LTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HTTTTCCSSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 998 5554333 23334444433322222333455699999999999999999999873 455443
No 242
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.94 E-value=1.1e-29 Score=266.44 Aligned_cols=201 Identities=12% Similarity=0.120 Sum_probs=130.5
Q ss_pred eccCCCCCccccccccccccc-ccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh--------hc
Q 005147 32 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH--------SQ 101 (712)
Q Consensus 32 l~~~~H~ni~~~~~~~~~~~~-~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH--------s~ 101 (712)
...++||||+++++ ++.... ....+++++|+ .+++|.+++.+. .+++.++..++.||+.||.||| ++
T Consensus 51 ~~~~~h~~i~~~~~-~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~ 127 (303)
T 3gxj_A 51 TVMLRHENILGFIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127 (303)
T ss_dssp STTCCC-CBCCEEE-EEEEECSSSEEEEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC
T ss_pred HHhccCcceeeeee-ecccCCCccceeEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 33489999999888 443322 22357778877 588999999543 3889999999999999999999 99
Q ss_pred CceeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCC
Q 005147 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (712)
Q Consensus 102 gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~ 181 (712)
||+||||||+||+++.++.+||+|||++......... .
T Consensus 128 ~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~--------------------------------~---------- 165 (303)
T 3gxj_A 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I---------- 165 (303)
T ss_dssp -CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTE--------------------------------E----------
T ss_pred CEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcc--------------------------------c----------
Confidence 9999999999999999999999999988443211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCC------CCCCccch
Q 005147 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVSCASDI 255 (712)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~~~~sDI 255 (712)
........||+.|+|||++.+. .++.++||
T Consensus 166 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di 201 (303)
T 3gxj_A 166 --------------------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 201 (303)
T ss_dssp --------------------------------------------SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCCcCccccCHhhhcCcccccccccCcchhH
Confidence 0000114689999999999776 34468999
Q ss_pred HHHHHHHHHhhCC-------------CCCCh----hhHHHHHhhcccCCCchhhhc------CchhHHHHHHcCCCCCCC
Q 005147 256 YRLGVLLFELFCP-------------FSTGE----EKTRTMSSLRHRVLPPQLLLK------FPKEASFCLWLLHPEPSG 312 (712)
Q Consensus 256 wSlGvll~eLl~p-------------f~~~~----~~~~~~~~~~~~~~~~~~~~~------~~~~~~li~~~L~~dP~~ 312 (712)
|||||++|||+++ |.... ........+......+..... .....+++.+||..||.+
T Consensus 202 wslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 281 (303)
T 3gxj_A 202 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 281 (303)
T ss_dssp HC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGG
T ss_pred HHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCccc
Confidence 9999999999973 22110 001111222222222222111 123558999999999999
Q ss_pred CCCHHHHhc
Q 005147 313 RPKMGELLQ 321 (712)
Q Consensus 313 Rpt~~eiL~ 321 (712)
|||+.++++
T Consensus 282 Rps~~~i~~ 290 (303)
T 3gxj_A 282 RLTALRIKK 290 (303)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999987
No 243
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.94 E-value=6.6e-28 Score=279.55 Aligned_cols=200 Identities=19% Similarity=0.176 Sum_probs=152.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.++||||+++++ ++.+ ..++++||+ .+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 440 ~E~~~l~~l~HpnIv~l~~-~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH 514 (656)
T 2j0j_A 440 QEALTMRQFDHPHIVKLIG-VITE----NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514 (656)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS----SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEec----CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 4455688899999999987 5522 345667776 589999999655556899999999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+|||++.++.+||+|||+++........
T Consensus 515 rDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~----------------------------------------------- 547 (656)
T 2j0j_A 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----------------------------------------------- 547 (656)
T ss_dssp SCCSGGGEEEEETTEEEECCCCCCCSCCC---------------------------------------------------
T ss_pred cccchHhEEEeCCCCEEEEecCCCeecCCCcce-----------------------------------------------
Confidence 999999999999999999999998543211000
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
......+++.|+|||.+.+..++.++|||||||++|||
T Consensus 548 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el 585 (656)
T 2j0j_A 548 ------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 585 (656)
T ss_dssp ------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence 00013467899999999888899999999999999999
Q ss_pred hC----CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||...... ..+..+.....++......+...+++.+||..||.+|||+.++++
T Consensus 586 lt~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 586 LMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp HTTSCCTTTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHcCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 86 56544332 333444443333333334455669999999999999999999976
No 244
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.94 E-value=6.6e-28 Score=253.69 Aligned_cols=202 Identities=15% Similarity=0.152 Sum_probs=146.5
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC--CCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~--~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..++..+.||||+++++ ++.+ ...+++++++ .|++|.+++.. ....+++..++.|+.||+.||.|||++||
T Consensus 79 ~E~~~l~~l~h~~i~~~~~-~~~~---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 154 (307)
T 2nru_A 79 QEIKVMAKCQHENLVELLG-FSSD---GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154 (307)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EECS---SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCCeEEEEE-EEec---CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 4556788899999999888 5432 3456677776 59999999943 23458999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
+||||||+||+++.++.++++|||++...+.....
T Consensus 155 ~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------------- 189 (307)
T 2nru_A 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT--------------------------------------------- 189 (307)
T ss_dssp ECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC---------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCcEEEeeccccccccccccc---------------------------------------------
Confidence 99999999999999999999999988533211000
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
.......|++.|+|||.+.+ .++.++|||||||++|
T Consensus 190 -------------------------------------------~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~ 225 (307)
T 2nru_A 190 -------------------------------------------VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLL 225 (307)
T ss_dssp -------------------------------------------EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHH
Confidence 00011468999999998865 4899999999999999
Q ss_pred HhhC---CCCCChhh---HHHHHhhcc----------cCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 264 ELFC---PFSTGEEK---TRTMSSLRH----------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 264 eLl~---pf~~~~~~---~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
+|++ ||...... ......+.. ...+...........+++.+||..+|.+|||+.++++
T Consensus 226 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 226 EIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp HHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999 55432211 111111111 1111111112234458999999999999999999986
No 245
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.94 E-value=2.6e-28 Score=268.12 Aligned_cols=174 Identities=13% Similarity=0.138 Sum_probs=135.8
Q ss_pred cCceEEEEeeCCccHHHhhc------CCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCcEEEEecc
Q 005147 54 IDPFVHAIEWGDVSLRQWLD------KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 127 (712)
Q Consensus 54 ~~~~~l~~e~~g~sL~~~l~------~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~vkl~dfg 127 (712)
...+++++++.+++|.++++ ..+..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||
T Consensus 177 ~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG 256 (413)
T 3dzo_A 177 VLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFE 256 (413)
T ss_dssp CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred ccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecc
Confidence 44688899999999999883 334558888999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 005147 128 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 207 (712)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (712)
+++..+..
T Consensus 257 ~a~~~~~~------------------------------------------------------------------------ 264 (413)
T 3dzo_A 257 HLVRDGAS------------------------------------------------------------------------ 264 (413)
T ss_dssp GCEETTEE------------------------------------------------------------------------
T ss_pred ceeecCCc------------------------------------------------------------------------
Confidence 87432110
Q ss_pred ccccccccccccccCCCCcccccccccCccccCcccc----------cCCCCCCccchHHHHHHHHHhhC---CCCCChh
Q 005147 208 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----------AGAPVSCASDIYRLGVLLFELFC---PFSTGEE 274 (712)
Q Consensus 208 ~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----------~~~~~~~~sDIwSlGvll~eLl~---pf~~~~~ 274 (712)
....+| +.|+|||++ .+..++.++|||||||++|||++ ||.....
T Consensus 265 ---------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~ 322 (413)
T 3dzo_A 265 ---------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322 (413)
T ss_dssp ---------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred ---------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 011467 999999999 55568999999999999999998 6654332
Q ss_pred hHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCCCC
Q 005147 275 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (712)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~~~ 327 (712)
.. ....+... .....+...+||.+||..||.+|||+.++++||||+.
T Consensus 323 ~~-~~~~~~~~-----~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 323 LG-GSEWIFRS-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp GS-CSGGGGSS-----CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred hh-hHHHHHhh-----cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 21 11111110 0112245559999999999999999999999999864
No 246
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.94 E-value=4.9e-28 Score=258.66 Aligned_cols=200 Identities=12% Similarity=0.119 Sum_probs=142.5
Q ss_pred CCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh--------hcCcee
Q 005147 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH--------SQGIVV 105 (712)
Q Consensus 35 ~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH--------s~gIvH 105 (712)
+.||||+++++.+.........+++++|+ .+++|.+++.+. .+++.+++.++.||+.||.||| ++||+|
T Consensus 93 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH 170 (342)
T 1b6c_B 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170 (342)
T ss_dssp CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEEC
T ss_pred cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeee
Confidence 89999999988333222222367788887 578999999543 3899999999999999999999 899999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.++.+||+|||++......... .
T Consensus 171 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~-------------- 204 (342)
T 1b6c_B 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I-------------- 204 (342)
T ss_dssp SCCSGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E--------------
T ss_pred CCCCHHHEEECCCCCEEEEECCCceeccccccc--------------------------------c--------------
Confidence 999999999999999999999988432211000 0
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCC------CCCccchHHHH
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASDIYRLG 259 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~~~~sDIwSlG 259 (712)
........||+.|+|||.+.+.. ++.++||||||
T Consensus 205 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG 244 (342)
T 1b6c_B 205 ----------------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 244 (342)
T ss_dssp ----------------------------------------EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHH
Confidence 00001146899999999997763 34689999999
Q ss_pred HHHHHhhCC-------------CCCCh----hhHHHHHhhcccCCCchhhh------cCchhHHHHHHcCCCCCCCCCCH
Q 005147 260 VLLFELFCP-------------FSTGE----EKTRTMSSLRHRVLPPQLLL------KFPKEASFCLWLLHPEPSGRPKM 316 (712)
Q Consensus 260 vll~eLl~p-------------f~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~li~~~L~~dP~~Rpt~ 316 (712)
|++|||+++ |.... ........+......+.+.. ......+++.+||..||.+|||+
T Consensus 245 ~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 324 (342)
T 1b6c_B 245 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 324 (342)
T ss_dssp HHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCH
Confidence 999999973 32211 11222222222222222221 11234589999999999999999
Q ss_pred HHHhcC
Q 005147 317 GELLQS 322 (712)
Q Consensus 317 ~eiL~h 322 (712)
.+++++
T Consensus 325 ~~i~~~ 330 (342)
T 1b6c_B 325 LRIKKT 330 (342)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 247
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.94 E-value=7.4e-28 Score=260.13 Aligned_cols=193 Identities=12% Similarity=0.074 Sum_probs=139.0
Q ss_pred eeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcC----CCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 31 ~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~----~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
.|....|+|++.+++ ++. .....+++||+ .|++|.+++.. ....+++.+++.|+.||+.||+|||++||||
T Consensus 120 ~l~~~~~~~iv~~~~-~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivH 195 (365)
T 3e7e_A 120 RLKPSMQHMFMKFYS-AHL---FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIH 195 (365)
T ss_dssp HSCGGGGGGBCCEEE-EEE---CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred Hhhhhhhhhhhhhhe-eee---cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeec
Confidence 345566999999887 432 23456777777 58999999942 3455999999999999999999999999999
Q ss_pred ccCCCCceeecC-----------CCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccc
Q 005147 106 HNVRPSCFVMSS-----------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (712)
Q Consensus 106 rDLkP~NIll~~-----------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~ 174 (712)
|||||+|||++. .+.+||+|||+++......-.
T Consensus 196 rDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------------ 239 (365)
T 3e7e_A 196 GDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG------------------------------------ 239 (365)
T ss_dssp CCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTT------------------------------------
T ss_pred CCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCC------------------------------------
Confidence 999999999988 899999999998432110000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccc
Q 005147 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (712)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sD 254 (712)
......+||++|+|||++.+..|+.++|
T Consensus 240 ----------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~D 267 (365)
T 3e7e_A 240 ----------------------------------------------------TIFTAKCETSGFQCVEMLSNKPWNYQID 267 (365)
T ss_dssp ----------------------------------------------------EEECCSSCTTSCCCHHHHTTCCBSTHHH
T ss_pred ----------------------------------------------------ceeeeecCCCCCCChHHhcCCCCCcccc
Confidence 0001157899999999999999999999
Q ss_pred hHHHHHHHHHhhC---CCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 255 IwSlGvll~eLl~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
||||||++|||++ ||....... .. ....++.. .......+++..||..+|.+|++..+.|.
T Consensus 268 iwslG~il~elltg~~pf~~~~~~~---~~-~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 268 YFGVAATVYCMLFGTYMKVKNEGGE---CK-PEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEETTE---EE-ECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCCCCc---ee-echhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 9999999999999 443322110 00 01111111 11123348999999999999975444333
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=1.3e-27 Score=255.02 Aligned_cols=170 Identities=12% Similarity=0.064 Sum_probs=125.2
Q ss_pred cCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh-hcCceeccCCCCceeecCCC------------
Q 005147 54 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-SQGIVVHNVRPSCFVMSSFN------------ 119 (712)
Q Consensus 54 ~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH-s~gIvHrDLkP~NIll~~~~------------ 119 (712)
...++++||+ .+++|.+.+.+ ..+++.+++.|++||+.||+||| ++||+||||||+|||++.++
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 4578888888 47766666633 34899999999999999999999 99999999999999999877
Q ss_pred --------cEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccccccCCC
Q 005147 120 --------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (712)
Q Consensus 120 --------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~~~~~~~ 191 (712)
.+||+|||+++....
T Consensus 212 ~~~~~~~~~vkL~DFG~a~~~~~--------------------------------------------------------- 234 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSRLERD--------------------------------------------------------- 234 (336)
T ss_dssp EEEECTTEEEEECCCTTCBEEET---------------------------------------------------------
T ss_pred ccccCCCceEEEeeccccEecCC---------------------------------------------------------
Confidence 788888887732110
Q ss_pred ccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHH-HHHhhCCCC
Q 005147 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL-LFELFCPFS 270 (712)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvl-l~eLl~pf~ 270 (712)
...+||+.|+|||++.+.. +.++||||||++ .+++++++.
T Consensus 235 --------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~ 275 (336)
T 2vuw_A 235 --------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYH 275 (336)
T ss_dssp --------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCC
T ss_pred --------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccC
Confidence 0146899999999998776 899999998777 666776555
Q ss_pred CChhhH---HHHHhhc----cc-CCCch-hhhcCchhHHHHHHcCCCCCCCCCCHHHHh-cCcCCC
Q 005147 271 TGEEKT---RTMSSLR----HR-VLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELL-QSEFLN 326 (712)
Q Consensus 271 ~~~~~~---~~~~~~~----~~-~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL-~hp~~~ 326 (712)
+..... .....+. .. ..+.. .....+...+||.+||+.| |+.|+| +||||+
T Consensus 276 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 276 PYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp THHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred CCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 543321 1111111 11 11122 2233455569999999976 999999 999995
No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=6.5e-27 Score=273.36 Aligned_cols=193 Identities=19% Similarity=0.239 Sum_probs=143.5
Q ss_pred ccceeeccCCCCCcccccccccccccc-cC-ceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCc
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAA-ID-PFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~-~~-~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gI 103 (712)
++..+|+.++||||+++++ ++..... .. .+|++||+ .|++|.+++.. .+++.+++.|+.||+.||.|||++||
T Consensus 128 ~E~~~l~~l~hp~iv~~~~-~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~gi 203 (681)
T 2pzi_A 128 AERQFLAEVVHPSIVQIFN-FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGL 203 (681)
T ss_dssp HHHGGGGGCCCTTBCCEEE-EEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCCcCeEee-eEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5566789999999999998 4433222 12 25778887 58999998744 48999999999999999999999999
Q ss_pred eeccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcc
Q 005147 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (712)
Q Consensus 104 vHrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~ 183 (712)
|||||||+|||++. +.+||+|||+++.....
T Consensus 204 iHrDlkp~NIll~~-~~~kl~DFG~a~~~~~~------------------------------------------------ 234 (681)
T 2pzi_A 204 VYNDLKPENIMLTE-EQLKLIDLGAVSRINSF------------------------------------------------ 234 (681)
T ss_dssp ECCCCSGGGEEECS-SCEEECCCTTCEETTCC------------------------------------------------
T ss_pred eecccChHHeEEeC-CcEEEEecccchhcccC------------------------------------------------
Confidence 99999999999987 48999999988432110
Q ss_pred cccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHH
Q 005147 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (712)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~ 263 (712)
....||+.|+|||++.+. ++.++|||||||++|
T Consensus 235 ----------------------------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~ 267 (681)
T 2pzi_A 235 ----------------------------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLA 267 (681)
T ss_dssp ----------------------------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHHHH
Confidence 014689999999998765 489999999999999
Q ss_pred HhhCCCCCChhhHHHHHhhcccCC-CchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcCC
Q 005147 264 ELFCPFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (712)
Q Consensus 264 eLl~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~~ 325 (712)
+|++++.+.... ...... ........+...+||.+||..||.+||+..+.+.|+|+
T Consensus 268 ~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 268 ALTLDLPTRNGR------YVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp HHHSCCCEETTE------ECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred HHHhCCCCCccc------ccccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 999965543321 011111 11122234556699999999999999988777776654
No 250
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.89 E-value=4.3e-22 Score=208.16 Aligned_cols=199 Identities=14% Similarity=0.226 Sum_probs=157.2
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl 559 (712)
+.+|...|+++.|++||+.++....+. ...+...+.||.+.|..+.|..+.....+...+.+....+|++
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 567888999999999999764443222 1234568899999999999932222345555555544455999
Q ss_pred cCCc------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC--
Q 005147 560 NQGD------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-- 629 (712)
Q Consensus 560 ~~~~------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-- 629 (712)
.++. +.+|...|.+++|+|+ +.+|++|+.|++|++||+++... .......+|...|.+++|+|..
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-----~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-----BCCEEEECCSSCEEEEEECCCC--
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-----eeeeeeecccCccceEeecCCccc
Confidence 8763 2358999999999997 88999999999999999975311 1234567899999999999942
Q ss_pred ----------CCEEEEEeCCCcEEEEECCCCc----EEEEeccCCCcEEEEEEecCC--CCEEEEEECCCcEEEEeCCCC
Q 005147 630 ----------KSQIASSNFEGVVQVWDVSRSQ----VLTEMREHERRVWSIDFSSAD--PTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 630 ----------~~~lasgs~Dg~V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~--~~~l~sgs~D~~v~lWd~~~~ 693 (712)
+.+||+|+.|++|+|||++++. .+.++.+|...|++|+|+|.. +.+|||||.|++|+|||++++
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 4699999999999999999876 677899999999999999832 589999999999999999874
No 251
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.89 E-value=2.6e-24 Score=224.24 Aligned_cols=170 Identities=16% Similarity=0.148 Sum_probs=126.1
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++...++.++||||+++++ ++.. ...++++||+ .|++|.++++.. ....++..|+.||+.||+|||++||+|
T Consensus 80 ~e~~~l~~l~hp~iv~~~~-~~~~---~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~givH 152 (286)
T 3uqc_A 80 SRTLRLSRIDKPGVARVLD-VVHT---RAGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAGVAL 152 (286)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EEEE---TTEEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhcCCCCCcceeeE-EEEE---CCcEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 4445678899999999888 4432 3457788887 589999999442 356678999999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCcccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~~ 185 (712)
|||||+||+++.+|.+|+++
T Consensus 153 ~Dikp~NIll~~~g~~kl~~------------------------------------------------------------ 172 (286)
T 3uqc_A 153 SIDHPSRVRVSIDGDVVLAY------------------------------------------------------------ 172 (286)
T ss_dssp CCCSGGGEEEETTSCEEECS------------------------------------------------------------
T ss_pred CCCCcccEEEcCCCCEEEEe------------------------------------------------------------
Confidence 99999999999999888842
Q ss_pred cccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHHh
Q 005147 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (712)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~eL 265 (712)
+.|++| ++.++|||||||++|||
T Consensus 173 --------------------------------------------------~~~~~~-------~~~~~Di~slG~il~el 195 (286)
T 3uqc_A 173 --------------------------------------------------PATMPD-------ANPQDDIRGIGASLYAL 195 (286)
T ss_dssp --------------------------------------------------CCCCTT-------CCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------ccccCC-------CCchhHHHHHHHHHHHH
Confidence 224443 78999999999999999
Q ss_pred hC---CCCCChhhHHH---HHhhcccCCCc-hhhh-cCchhHHHHHHcCCCCCCCCCCHHHHhc
Q 005147 266 FC---PFSTGEEKTRT---MSSLRHRVLPP-QLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (712)
Q Consensus 266 l~---pf~~~~~~~~~---~~~~~~~~~~~-~~~~-~~~~~~~li~~~L~~dP~~Rpt~~eiL~ 321 (712)
++ ||......... ...+.....++ .... ..+...++|.+||+.||.+| |+.++++
T Consensus 196 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 196 LVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 99 77654332111 01111111111 1222 23445599999999999999 9999987
No 252
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.89 E-value=4.7e-22 Score=212.84 Aligned_cols=195 Identities=13% Similarity=0.084 Sum_probs=154.8
Q ss_pred CCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG 562 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~ 562 (712)
.+|...|+++.|+|||..++....+. ...+...+.||.+.|..+.| ++....++...+.+....+||++++
T Consensus 124 ~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~-~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 124 YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAA-SPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-CSSCTTEEEEEETTSCEEEEETTSS
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEe-cCCCCCceeeecccccccccccccc
Confidence 47888999999999999764443332 23355678999999999999 5544455556666666666999987
Q ss_pred cee------cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 563 DLL------NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 563 ~~~------~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
+.. .|...+.+++|+| ++++|++|+.|++|+|||+++. .......+|...|++|+|+|....+|||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~fsp~g~~~las 275 (344)
T 4gqb_B 203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-------SCVLSSAVHSQCVTGLVFSPHSVPFLAS 275 (344)
T ss_dssp SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---------CCEEEECCSSCEEEEEECSSSSCCEEE
T ss_pred ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC-------cEEEEEcCCCCCEEEEEEccCCCeEEEE
Confidence 643 3567799999999 5679999999999999999763 2334566899999999999964578999
Q ss_pred EeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 636 SNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|+.||+|+|||+++++++ .+.+|.+.|++|+|+|.+..+|+|||.|++|++|++.+..
T Consensus 276 gs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 276 LSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999999999998765 5789999999999999555689999999999999998754
No 253
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.89 E-value=3.5e-22 Score=214.82 Aligned_cols=203 Identities=13% Similarity=0.078 Sum_probs=157.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
..+|...|+++.|+|||..++....+. .......+++|...+..+.| ++..+.++...+.+....+||+++
T Consensus 135 ~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~-s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 135 KYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA-CPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-CTTCSSCEEEEETTSCEEECCTTS
T ss_pred cCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE-ccCCCceeeeeccCCceEEEECCC
Confidence 347888899999999998764443332 22345678899999999999 555566666666665556699988
Q ss_pred Ccee------cCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 562 GDLL------NSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 562 ~~~~------~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
++.. .|...|.+++|+|+ +.+||+|+.|+.|++||+++. ........|...|++++|+|..+.+||
T Consensus 214 ~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-------~~~~~~~~~~~~v~~l~~sp~~~~~la 286 (357)
T 4g56_B 214 PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-------DSAQTSAVHSQNITGLAYSYHSSPFLA 286 (357)
T ss_dssp SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG-------GGCEEECCCSSCEEEEEECSSSSCCEE
T ss_pred CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC-------cEeEEEeccceeEEEEEEcCCCCCEEE
Confidence 7643 36788999999997 468999999999999999763 233455678999999999996567999
Q ss_pred EEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+|+.||+|+|||+++++++..+ +|.+.|++|+|+|.++.+|+|||.|++|++||+.+......++.
T Consensus 287 sgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~~i~ 352 (357)
T 4g56_B 287 SISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTENLIA 352 (357)
T ss_dssp EEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----------
T ss_pred EEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccccC
Confidence 9999999999999999888765 79999999999998899999999999999999987666555543
No 254
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.89 E-value=8.6e-22 Score=206.56 Aligned_cols=200 Identities=13% Similarity=0.120 Sum_probs=158.5
Q ss_pred CCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEEEEccC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~ 561 (712)
.++...+.++.|++||..++....+. .......+++|.+.+..+.| + .++. +...+.+....+|++++
T Consensus 52 ~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~--~~~~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV-H--PTKPYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-C--SSSSEEEEEETTSCEEEEEGGG
T ss_pred eccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEE-c--CCCCEEEEECCCCeEEEEECCC
Confidence 35566788889999988654333222 12345678999999999999 3 3443 44444444445599987
Q ss_pred Cc-----eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC-CCCEEE
Q 005147 562 GD-----LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIA 634 (712)
Q Consensus 562 ~~-----~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~la 634 (712)
+. +.+|...|.+++|+| ++.+|++|+.|++|++||++.... .......|...+.+++|+|. ++.+|+
T Consensus 129 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (304)
T 2ynn_A 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP------NFTLTTGQERGVNYVDYYPLPDKPYMI 202 (304)
T ss_dssp TTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC------SEEEECCCTTCEEEEEECCSTTCCEEE
T ss_pred CcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc------cceeccCCcCcEEEEEEEEcCCCCEEE
Confidence 62 347999999999999 678999999999999999965211 11233456688999999873 467999
Q ss_pred EEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|+.||+|+|||+++++++.++.+|...|++++|+| ++.+|+|||.|++|++||+++++.+.++.
T Consensus 203 s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeecc
Confidence 999999999999999999999999999999999998 89999999999999999999998887664
No 255
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.88 E-value=1.9e-21 Score=205.53 Aligned_cols=199 Identities=16% Similarity=0.207 Sum_probs=162.5
Q ss_pred CCCCCCcccccccCCCCC-CCCccccCCC-------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE
Q 005147 490 KPSGRPLVRHSQLSSDGR-TSKPLVNERS-------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV 555 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~-------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v 555 (712)
+.+|...|+++.|++++. .++....+.. ..|...++||...+..+.| ..++...+....++.+
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~---s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL---TADGAYALSASWDKTL 89 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEE---CCCCCEEEEEeCCCEE
Confidence 568999999999999764 3322222221 2345678999999999999 4455555555555555
Q ss_pred E-EEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC--
Q 005147 556 K-ADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-- 628 (712)
Q Consensus 556 ~-~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-- 628 (712)
+ |++.+++. .+|...|.+++|+|++.+|++|+.|++|++||++. .+.....+|...|.+++|+|.
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--------~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--------QCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--------CEEEEECCCSSCEEEEEECCC--
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------CeEEEEeccCCcEEEEEEccCCC
Confidence 4 99998764 47999999999999999999999999999999863 233456689999999999984
Q ss_pred ---CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 629 ---IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 629 ---~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++..|++|+.|++|++||+++++....+.+|...|++++|+| ++.+|++|+.|++|+|||+++++.+..+-
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 244899999999999999999999999999999999999998 99999999999999999999998876653
No 256
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.88 E-value=9.8e-22 Score=210.38 Aligned_cols=196 Identities=14% Similarity=0.104 Sum_probs=147.1
Q ss_pred CCcccccccCCCCCCC--------CccccCCC-C--CCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEccC
Q 005147 494 RPLVRHSQLSSDGRTS--------KPLVNERS-S--INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLNQ 561 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~--------~~~~~~~~-~--~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~~ 561 (712)
..-|.++.|++|+.-+ .++..+.. . .....+.||.+.|..+.| +.+|...+....++. .+|++.+
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~---spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV---LSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEECCC
Confidence 3457888898886522 11122111 1 123456699999999999 445554455444444 4599998
Q ss_pred Ccee----cCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 562 GDLL----NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 562 ~~~~----~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
++++ +|.+.|.+++|++++. +|++|+.|++|+|||+++... ...+....+...+++++|+|.++.+|++|
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP-----ASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC-----EEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce-----eeeeecceeeccceeeeecCCCCcceEEe
Confidence 7754 6999999999999874 899999999999999986321 11112234566799999999888899999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+.||+|+|||+++++++.++.+|...|++|+|+|....+|||||.|++|+|||+++++.+.
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 9999999999999999999999999999999998334789999999999999999987653
No 257
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.88 E-value=1.6e-21 Score=206.48 Aligned_cols=188 Identities=16% Similarity=0.216 Sum_probs=152.5
Q ss_pred CCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEccCC
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLNQG 562 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~~~ 562 (712)
.+...+.+..|+|||..++....+. ...+...+.+|...+..+.| ..++...+....++. .+|+++++
T Consensus 120 ~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~---spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 120 AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAY---SPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEE---CCCCCEEEEEcCCCeEEEEECCCC
Confidence 3445667889999998764332221 22345677888888999999 345544444444444 45999887
Q ss_pred cee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 563 DLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 563 ~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
++. +|...|.+++|+|++++|++|+.|++|++||+++. .......+|...|.+++|+| ++.+|++|+.
T Consensus 197 ~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~ 268 (321)
T 3ow8_A 197 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-------NLAGTLSGHASWVLNVAFCP-DDTHFVSSSS 268 (321)
T ss_dssp EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECT-TSSEEEEEET
T ss_pred cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc-------ceeEEEcCCCCceEEEEECC-CCCEEEEEeC
Confidence 654 68999999999999999999999999999999752 22234567999999999999 5899999999
Q ss_pred CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
||+|+|||+++++++.++.+|...|++++|+| ++.+|++|+.|++|+|||+.
T Consensus 269 D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 269 DKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCCEEEEECC
T ss_pred CCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999999998 99999999999999999963
No 258
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.88 E-value=2.8e-21 Score=205.98 Aligned_cols=198 Identities=12% Similarity=0.128 Sum_probs=160.2
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl 559 (712)
.+.+|...+.++.|++||..++....+. .......+.+|...+..+.| + .++...++...++.+ +|++
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~-s--~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY-A--PSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEE-C--TTSSEEEEEETTCEEEEEET
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEE-C--CCCCEEEEEeCCCeEEEEEC
Confidence 4568888999999999998764443332 12344567889999999999 3 344444444444554 4998
Q ss_pred cCCc--------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCC
Q 005147 560 NQGD--------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631 (712)
Q Consensus 560 ~~~~--------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 631 (712)
.++. +.+|.+.|.++.|++++. +++++.|++|++||++++ .......+|...|.+++|+| ++.
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~-~~~ 197 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG-------QQTTTFTGHTGDVMSLSLAP-DTR 197 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECT-TSS
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC-------cEEEEEcCCCCceEEEEECC-CCC
Confidence 7642 447999999999998764 899999999999999763 22234557899999999999 689
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 632 QIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 632 ~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|++|+.||+|++||++++.++.++.+|...|++++|+| ++.+|++||.|++|++||+++++.+..+
T Consensus 198 ~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 198 LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 999999999999999999999999999999999999998 9999999999999999999998877654
No 259
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.88 E-value=1.7e-21 Score=204.35 Aligned_cols=170 Identities=18% Similarity=0.189 Sum_probs=141.4
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
..+++||.+.|.++.| ..++...++...++.++ |++.++.. .+|...|.++.|+|++++|++|+.|++|++|
T Consensus 6 ~~~~~~h~~~V~~~~f---sp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDF---HPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp EEEEEEECSCEEEEEE---CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred EEeecCCCCceEEEEE---CCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 4568889999999988 34454444444555554 88887653 3689999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCC
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
|+.++ .......+|...|++++|+| ++.+|++|+.||+|+|||++++ .....+.+|...|++++|+|.++.
T Consensus 83 d~~~~-------~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 83 NYNTG-------EKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp ETTTC-------CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred ECCCC-------cEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 99763 22345568999999999999 5899999999999999999988 566789999999999999997889
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+|++||.|++|++||++++.+...+..
T Consensus 155 ~l~sgs~D~~v~iwd~~~~~~~~~~~~ 181 (304)
T 2ynn_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTT 181 (304)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCCccceecc
Confidence 999999999999999988777665543
No 260
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.88 E-value=2.4e-21 Score=212.35 Aligned_cols=200 Identities=21% Similarity=0.217 Sum_probs=164.1
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~ 560 (712)
+.+|...|+++.|+|+|..++....+. .......++||.+.|..+.| + .++ ++...+.+....+|++.
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~-~--~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF-D--HSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEE-C--TTSSEEEEEETTSCCCEEETT
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEE-c--CCCCEEEEEeCCCeEEEEeCC
Confidence 457888999999999988653333222 12345688999999999999 3 344 44444444444559998
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
++++. +|...|.+++|+|++++|++|+.|++|++||++++ .+.....+|...|.+++|+| ++.+|++|
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~-~g~~l~s~ 252 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-------YCVKTFTGHREWVRMVRPNQ-DGTLIASC 252 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECT-TSSEEEEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEeCCCccEEEEEECC-CCCEEEEE
Confidence 87643 68999999999999999999999999999999763 22334568999999999999 69999999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCC-------------------CCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD-------------------PTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~-------------------~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+.||+|++||++++.+..++.+|...|.+++|+|.. +.+|++||.|++|++||++++.++.
T Consensus 253 s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~ 332 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEE
T ss_pred cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 999999999999999999999999999999999831 6799999999999999999999887
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
.+.
T Consensus 333 ~~~ 335 (410)
T 1vyh_C 333 TLV 335 (410)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 261
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=1.3e-21 Score=211.00 Aligned_cols=191 Identities=10% Similarity=0.064 Sum_probs=149.3
Q ss_pred CCcccccccCCCCCCCCccc--cCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc
Q 005147 494 RPLVRHSQLSSDGRTSKPLV--NER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD 563 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~--~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~ 563 (712)
...+++++|||||+.+++.. .+. ...+...+ +|.++|.+++| +.+|...+...++..++|+..++.
T Consensus 133 ~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~f---spdg~~l~s~s~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 133 DDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHF---STDGKVVAYITGSSLEVISTVTGS 208 (365)
T ss_dssp TCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEE---CTTSSEEEEECSSCEEEEETTTCC
T ss_pred ccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCceEEEEE---ccCCceEEeccceeEEEEEeccCc
Confidence 34578899999999864322 111 11222333 58889999999 557776666666666777777665
Q ss_pred ee------cCCCCeeEEEEcCCCCEEEEEeCCC----cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEE
Q 005147 564 LL------NSSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 633 (712)
Q Consensus 564 ~~------~h~~~V~~i~f~~~~~~lat~~~d~----~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l 633 (712)
.. +|...|.+++|+|++.++++++.|+ .+++||+..... .........+|...|++++|+| ++.+|
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~V~~~~~Sp-dg~~l 284 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT---SVLRSKQVTNRFKGITSMDVDM-KGELA 284 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE---EEEEEEEEESSCSCEEEEEECT-TSCEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee---cceeeeeecCCCCCeEeEEECC-CCCce
Confidence 32 5788999999999999999999887 688888754211 1111234567889999999999 69999
Q ss_pred EEEeCCCcEEEEECCCCcEEEEe-ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 634 ASSNFEGVVQVWDVSRSQVLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 634 asgs~Dg~V~lwD~~~~~~~~~~-~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
|+|+.|++|+|||+++++++.++ .+|..+|++|+|+| |+.+|||||.|++|+|||+...
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCTT
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999999986 78999999999998 9999999999999999999643
No 262
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.88 E-value=2.1e-21 Score=212.74 Aligned_cols=201 Identities=14% Similarity=0.178 Sum_probs=163.4
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl 559 (712)
.+.+|...|+++.|+++|..++....+. .......+.||...+..+.| ++ ++...++...++. .+|++
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~-~p--~~~~l~s~s~D~~i~~wd~ 221 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSI-MP--NGDHIVSASRDKTIKMWEV 221 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEE-CS--SSSEEEEEETTSEEEEEET
T ss_pred EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEE-eC--CCCEEEEEeCCCeEEEEEC
Confidence 3567888899999999998654433322 12334567899999999999 33 4443344444444 45999
Q ss_pred cCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC------
Q 005147 560 NQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI------ 629 (712)
Q Consensus 560 ~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~------ 629 (712)
+++.+ .+|...|.++.|+|++.+|++|+.|++|++||+++. ........|...|.+++|+|..
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-------ECKAELREHRHVVECISWAPESSYSSIS 294 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------ceeeEecCCCceEEEEEEcCcccccchh
Confidence 98764 479999999999999999999999999999999762 2233456789999999999842
Q ss_pred -------------CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 630 -------------KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 630 -------------~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+.+|++|+.||+|++||+++++++.++.+|...|++++|+| ++.+|+|||.|++|++||+++++++
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSCEEEEETTTEEEEECCTTSCCC
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceE
Confidence 56899999999999999999999999999999999999998 9999999999999999999998887
Q ss_pred EEEe
Q 005147 697 LHLV 700 (712)
Q Consensus 697 ~~~~ 700 (712)
..+.
T Consensus 374 ~~~~ 377 (410)
T 1vyh_C 374 KTLN 377 (410)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
No 263
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.88 E-value=3.3e-21 Score=204.02 Aligned_cols=199 Identities=14% Similarity=0.203 Sum_probs=163.0
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
+.+|...+.++.+++++..++....+. .......+.+|...+..+.| ..++...+....++.+. |++.
T Consensus 76 l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 76 LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAF---SPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEE---CTTSSEEEEECTTSEEEEEETT
T ss_pred eccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEE---CCCCCEEEEEcCCCcEEEEEcC
Confidence 568888899999999987553332221 12234456788888888888 44555556666666655 9998
Q ss_pred CCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
++.. ..|...|.+++|+|++++||+|+.|+.|++||++++ .......+|...|++++|+| ++.+|++|
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~sp-d~~~l~s~ 224 (321)
T 3ow8_A 153 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-------KLLHTLEGHAMPIRSLTFSP-DSQLLVTA 224 (321)
T ss_dssp TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCCCEEEECT-TSCEEEEE
T ss_pred CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------cEEEEEcccCCceeEEEEcC-CCCEEEEE
Confidence 7653 357889999999999999999999999999999763 12233457889999999999 69999999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.||+|+|||++++..+.++.+|...|++++|+| ++.+|++||.|++|++||+++++++.++.
T Consensus 225 s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 225 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 9999999999999999999999999999999998 89999999999999999999999887764
No 264
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.87 E-value=2.5e-24 Score=245.19 Aligned_cols=187 Identities=16% Similarity=0.080 Sum_probs=117.7
Q ss_pred ccceeeccC-CCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 27 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 27 ~~~~~l~~~-~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
+|..+|.++ .|+||+++++ ++++ ...+|||||| .|++|.++|+..+. +++. .|++||+.||+|||++|||
T Consensus 290 ~E~~~l~~~~~~~~i~~~~~-~~ed---~~~~yLVMEyv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH~~GII 361 (569)
T 4azs_A 290 NEIKFLTQPPAGFDAPAVLA-HGEN---AQSGWLVMEKLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALEKQGFW 361 (569)
T ss_dssp HHHHHHHSCCTTCCCCCEEE-EEEC---SSEEEEEEECCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCCeeEEEE-EEEE---CCEEEEEEecCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHHHCCce
Confidence 456678887 7999999888 5532 3457788887 69999999966543 5543 5899999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCCCCCCcccccccccccccCCCCCCCchhHHHhhhccccccccccCCCCCCccc
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfg~~~~~~~~~~~~ 184 (712)
||||||+||||+.+|.|||+|||+++.......
T Consensus 362 HRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~----------------------------------------------- 394 (569)
T 4azs_A 362 HDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS----------------------------------------------- 394 (569)
T ss_dssp ESCCCGGGEEECTTSCEEECCCTTEESCC---C-----------------------------------------------
T ss_pred eccCchHhEEECCCCCEEEeecccCeeCCCCCc-----------------------------------------------
Confidence 999999999999999999999999854321100
Q ss_pred ccccCCCccccccccccccccccccccccccccccccCCCCcccccccccCccccCcccccCCCCCCccchHHHHHHHHH
Q 005147 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (712)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvll~e 264 (712)
.....+||+.|||||++.+. +..++|+||+|+++++
T Consensus 395 -------------------------------------------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~ 430 (569)
T 4azs_A 395 -------------------------------------------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFN 430 (569)
T ss_dssp -------------------------------------------CSHHHHHHHHHHHHHHC------------------CC
T ss_pred -------------------------------------------cccCceechhhccHHHhCCC-CCCcccccccccchhh
Confidence 01125799999999999764 7788999999999999
Q ss_pred hhCCCCCChhhHHHHHhhcccCCCchhhhcCchhHHHHHHcCCCCCCCCCCHHHHhcCcC
Q 005147 265 LFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (712)
Q Consensus 265 Ll~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eiL~hp~ 324 (712)
|.+++... ...+.. .+.. ......+...+...+|..||.......++|
T Consensus 431 l~~~~~~~------~~~l~~--~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 478 (569)
T 4azs_A 431 LPQPWSNW------LYAVWQ--EPVE----RWNFVLLLALFEKKAKLPSAEQQRGATEQW 478 (569)
T ss_dssp CCTTHHHH------HHHHHT--SCGG----GCSHHHHHHHHHTGGGSCCGGGSSCCHHHH
T ss_pred hccccchh------HHHhhc--CCCC----CCcHHHHHHHHhCCCCCCCCChhhhccchh
Confidence 87643211 111111 1111 112234566667777777776555444444
No 265
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.87 E-value=3.3e-21 Score=222.48 Aligned_cols=207 Identities=16% Similarity=0.179 Sum_probs=159.0
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl 559 (712)
+.+|...|.++.|+|||+.++...... ...+...+.||.+.+..+.| ++.....+...+.+....+|+.
T Consensus 99 ~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f-~p~~~~~l~s~s~D~~v~lwd~ 177 (611)
T 1nr0_A 99 IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF-KPSRPFRIISGSDDNTVAIFEG 177 (611)
T ss_dssp EECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEE-CSSSSCEEEEEETTSCEEEEET
T ss_pred ecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEE-CCCCCeEEEEEeCCCeEEEEEC
Confidence 456777899999999998763322211 11234568899999999999 5543334555666655566998
Q ss_pred cCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 560 NQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 560 ~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
..++ +.+|.+.|.+++|+|++++||||+.|++|++||+.++..............+|...|.+++|+| ++.+|+|
T Consensus 178 ~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s 256 (611)
T 1nr0_A 178 PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIAS 256 (611)
T ss_dssp TTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEE
T ss_pred CCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEE
Confidence 7765 3479999999999999999999999999999998763221100000011127999999999999 6999999
Q ss_pred EeCCCcEEEEECCCCcEEE-------------------------------------------EeccCCCcEEEEEEecCC
Q 005147 636 SNFEGVVQVWDVSRSQVLT-------------------------------------------EMREHERRVWSIDFSSAD 672 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~~~~-------------------------------------------~~~~H~~~v~sv~fsp~~ 672 (712)
|+.|++|+|||+++++++. .+.+|...|++++|+| +
T Consensus 257 ~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-d 335 (611)
T 1nr0_A 257 ASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-D 335 (611)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-T
T ss_pred EeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-C
Confidence 9999999999999876544 3457999999999998 9
Q ss_pred CCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 673 PTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+.+|+|||.|++|++||+.++.....+
T Consensus 336 g~~l~s~s~D~~v~~Wd~~~~~~~~~~ 362 (611)
T 1nr0_A 336 GKTLFSADAEGHINSWDISTGISNRVF 362 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEECS
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeec
Confidence 999999999999999999998876543
No 266
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.87 E-value=3.2e-21 Score=206.10 Aligned_cols=193 Identities=22% Similarity=0.347 Sum_probs=152.5
Q ss_pred CCCCCC-cccccccCCCCCCCCccccCCC-------C----CCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEE
Q 005147 490 KPSGRP-LVRHSQLSSDGRTSKPLVNERS-------S----INNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVK 556 (712)
Q Consensus 490 ~~~~~~-~~~~~~~~~~g~~~~~~~~~~~-------~----~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~ 556 (712)
+.+|.. .+.+++|+|||..++....++. . .......||.+.+..+.| ++ ++ .+...+.+....+
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~-sp--~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAW-SP--CGNYLASASFDATTCI 87 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEE-CT--TSSEEEEEETTSCEEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEE-CC--CCCEEEEEECCCcEEE
Confidence 446665 7889999999997755443331 0 012234799999999999 43 44 4455555555566
Q ss_pred EEccCCc------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 557 ADLNQGD------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 557 ~dl~~~~------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
|++..+. +.+|.+.|.+++|+|++++|++|+.|++|++||+++.. .........+|...|.+++|+| ++
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~~~~h~~~v~~~~~~p-~~ 162 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED----EYECVSVLNSHTQDVKHVVWHP-SQ 162 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS----CEEEEEEECCCCSCEEEEEECS-SS
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC----CeEEEEEecCcCCCeEEEEECC-CC
Confidence 9887653 34799999999999999999999999999999997521 1112234557899999999999 58
Q ss_pred CEEEEEeCCCcEEEEECCCCc--EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 631 SQIASSNFEGVVQVWDVSRSQ--VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~--~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
.+|++|+.|++|++||++++. ++.++.+|...|++++|+| ++.+|++||.|++|+|||..
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccc
Confidence 999999999999999999875 5678999999999999998 99999999999999999963
No 267
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.87 E-value=1.4e-20 Score=202.13 Aligned_cols=200 Identities=13% Similarity=0.107 Sum_probs=161.5
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEc
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADL 559 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl 559 (712)
.+.+|...|.++.|+|||..++....+.. ......+..|...+..+.| ..++...+....++.+. |++
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~---sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY---APSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEE---CTTSSEEEEESTTSEEEEEEC
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEE---CCCCCEEEEeeCCCCEEEEEE
Confidence 45689999999999999986644433321 2233456778888888888 44555555555555554 877
Q ss_pred cCC----------ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC-
Q 005147 560 NQG----------DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY- 628 (712)
Q Consensus 560 ~~~----------~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~- 628 (712)
... .+.+|.+.|.+++|+|++..|++|+.|++|++||++++ .......+|...|.+++|+|.
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG-------QLLQSFHGHGADVLCLDLAPSE 208 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEECCCS
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-------eEEEEEcCCCCCeEEEEEEeCC
Confidence 532 24469999999999999999999999999999999763 222345679999999999884
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 629 IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 629 ~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
++++|++|+.||+|++||+++++++.++.+|...|++++|+| ++.+|++||.|++|++||++++..+..+
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 368999999999999999999999999999999999999998 8999999999999999999988776543
No 268
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.87 E-value=2.6e-21 Score=208.04 Aligned_cols=200 Identities=16% Similarity=0.138 Sum_probs=155.1
Q ss_pred CCCCcccccccCCCCCCCC--------ccccC-CC--CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEc
Q 005147 492 SGRPLVRHSQLSSDGRTSK--------PLVNE-RS--SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADL 559 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~--------~~~~~-~~--~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl 559 (712)
++...|.++.|+|||..+. ++... .. ......+.+|.+.|..+.| +.++...+....++. .+|++
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~---spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV---FSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEE---CSSSSEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEEC
Confidence 4566788999999886431 11111 11 1233456699999999999 445554455444444 45999
Q ss_pred cCCcee----cCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 560 NQGDLL----NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 560 ~~~~~~----~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
.++++. +|.+.|.+++|++++. +|++++.|++|++||+++... ........+...+++|+|+|..+.+|+
T Consensus 169 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-----~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 169 SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP-----ATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC-----BCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce-----eeeeeeccccccccchhhhhcccceEE
Confidence 987654 6899999999999875 899999999999999976322 112223456778999999997778999
Q ss_pred EEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|+.|+.|+|||+++++++.++.+|...|++++|+|..+.+|||||.|++|+|||+++++.+..+
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred EeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 99999999999999999999999999999999999844578999999999999999998877543
No 269
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.87 E-value=3.4e-21 Score=206.80 Aligned_cols=189 Identities=16% Similarity=0.164 Sum_probs=151.3
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~ 560 (712)
..+|...+.++.|+++|..+.....+. ...+...+.||...+..++| ++..++ .+...+.+....+||++
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~-~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDL-APSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-CCCSSCCEEEEEETTSCEEEEETT
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEE-EeCCCCCEEEEEeCCCeEEEEECC
Confidence 345777888999999987553332221 12345678899999999988 555554 44444444444559999
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe---cCCCCeEEEEEcCCCCCEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQI 633 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~l 633 (712)
++.+. +|...|.+++|+|++.+|++|+.|++|++||+++.. .+... .+...+++++|+| ++.+|
T Consensus 229 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--------~~~~~~~~~~~~~~~~~~~s~-~g~~l 299 (354)
T 2pbi_B 229 SGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--------EVAIYSKESIIFGASSVDFSL-SGRLL 299 (354)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCSCEEEEEECT-TSSEE
T ss_pred CCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEcCCCcccceeEEEEeC-CCCEE
Confidence 87754 689999999999999999999999999999997521 11122 2345789999999 69999
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 634 asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
++|+.|++|+|||+.+++.+.++.+|..+|++++|+| ++.+|+|||.|++|+||+
T Consensus 300 ~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 300 FAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEC
T ss_pred EEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECC-CCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999999998 999999999999999996
No 270
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.86 E-value=1.5e-20 Score=200.29 Aligned_cols=197 Identities=16% Similarity=0.129 Sum_probs=158.9
Q ss_pred CCCCCcccccccCCCCCCCCccccCC------------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEE
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNER------------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKAD 558 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d 558 (712)
..+...+.++.|+|+|..++....+. .......+.||.+.+..+.| ..++.+...+.+....+|+
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~l~s~s~d~~i~~wd 170 (340)
T 1got_B 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF---LDDNQIVTSSGDTTCALWD 170 (340)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEE---EETTEEEEEETTSCEEEEE
T ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEE---CCCCcEEEEECCCcEEEEE
Confidence 45666788999999998664332221 11223467899999998888 3456666666666666699
Q ss_pred ccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 559 LNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 559 l~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
+.++.. .+|.+.|.+++|+|++.+|++|+.|++|++||+++. .......+|...|++++|+| ++++|+
T Consensus 171 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~p-~~~~l~ 242 (340)
T 1got_B 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-------MCRQTFTGHESDINAICFFP-NGNAFA 242 (340)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------SEEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred CCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-------eeEEEEcCCcCCEEEEEEcC-CCCEEE
Confidence 988764 369999999999999999999999999999999752 22334567899999999999 699999
Q ss_pred EEeCCCcEEEEECCCCcEEEEecc--CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~~~--H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+|+.||+|+|||+++++.+.++.. +...|++++|+| ++.+|++|+.|+.|++||+.++..+..+
T Consensus 243 s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVL 308 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence 999999999999999998888763 335899999998 9999999999999999999998877654
No 271
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.86 E-value=7.9e-21 Score=199.86 Aligned_cols=208 Identities=18% Similarity=0.260 Sum_probs=160.3
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC---------C---CCceeeccCCCccceecccCCCC-CCcEEEEEcCCcEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS---------S---INNLGSKEGYSEGRRSGWINPFL-EGLCKYLSFSKLRV 555 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~---~~~~~l~gh~~~~~~~~~~~~~~-~~~~~~~~~~~~~v 555 (712)
.+.+|...+++..|+|||..++....+.. . .....+.+|...+..+.| ++.. ...+...+.+....
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDW-ASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEE-CCGGGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEE-cCCCCCCEEEEEcCCCeEE
Confidence 35689999999999999986644332221 1 234566899999999999 4543 34445555554455
Q ss_pred EEEccCCc-------------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcc--------------
Q 005147 556 KADLNQGD-------------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRD-------------- 606 (712)
Q Consensus 556 ~~dl~~~~-------------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~-------------- 606 (712)
+|++..+. +.+|.+.|.+++|+|+ +.+|++|+.|+.|++||+++.......
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 59998752 2368999999999999 999999999999999999764311100
Q ss_pred -------------------------------------c--ccceEEecCCCCeEEEEEcCCCC----CEEEEEeCCCcEE
Q 005147 607 -------------------------------------I--HYPVVEMASRSKLSSICWNSYIK----SQIASSNFEGVVQ 643 (712)
Q Consensus 607 -------------------------------------~--~~~~~~~~~~~~v~~v~~~p~~~----~~lasgs~Dg~V~ 643 (712)
. .......+|...|++++|+|. + ++|++|+.||.|+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~-~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPS-IGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCC-SSCSSEEEEEEETTSCEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCC-CCCcceEEEEEcCCCeEE
Confidence 0 001223368899999999995 5 7999999999999
Q ss_pred EEECCCC----------------------------------------------cEEEEeccCCCcEEEEEEecCCCCEEE
Q 005147 644 VWDVSRS----------------------------------------------QVLTEMREHERRVWSIDFSSADPTLLA 677 (712)
Q Consensus 644 lwD~~~~----------------------------------------------~~~~~~~~H~~~v~sv~fsp~~~~~l~ 677 (712)
+||++++ +.+..+.+|...|++++|+| ++.+|+
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~ 322 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL-TGTILS 322 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS-SSCCEE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC-CCCEEE
Confidence 9999875 67888899999999999998 899999
Q ss_pred EEECCCcEEEEeCCCCcEEEEE
Q 005147 678 SGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+||.|+.|++||+.+++.+..+
T Consensus 323 s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 323 SAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEETTSCEEEEEECTTSCEEEE
T ss_pred EecCCCcEEEEecCcCcchhhe
Confidence 9999999999999988766544
No 272
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.86 E-value=3.4e-20 Score=194.43 Aligned_cols=170 Identities=19% Similarity=0.294 Sum_probs=144.4
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEE-EcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYL-SFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
...++.||.+.+..+.| ++ ++...+. +.+....+|++.++.+ .+|...|.+++|+|++++|++|+.|+.|++
T Consensus 15 ~~~~~~gh~~~v~~~~~-s~--~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKF-SP--NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EEEEECCCSSCEEEEEE-CT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eEEEEcccCCcEEEEEE-CC--CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 45788899999999999 33 4444444 4444444599887654 368999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
||+++. .......+|...|.+++|+| ++++|++|+.||.|++||+++++++..+..|..+|++++|+| ++.
T Consensus 92 wd~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 162 (312)
T 4ery_A 92 WDVSSG-------KCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGS 162 (312)
T ss_dssp EETTTC-------CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSS
T ss_pred EECCCC-------cEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-CCC
Confidence 999752 22234567899999999999 589999999999999999999999999999999999999998 899
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+|++|+.|+.|++||+++++.+..+..
T Consensus 163 ~l~~~~~d~~i~~wd~~~~~~~~~~~~ 189 (312)
T 4ery_A 163 LIVSSSYDGLCRIWDTASGQCLKTLID 189 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEEEeCCCcEEEEECCCCceeeEEec
Confidence 999999999999999999988877653
No 273
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.9e-20 Score=198.81 Aligned_cols=167 Identities=14% Similarity=0.227 Sum_probs=129.0
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc------e-ec-CCCCeeEEEEcCCCCEEEEEeCCCcE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD------L-LN-SSNLVCSLSFDRDGELFAAAGVNKKI 592 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~------~-~~-h~~~V~~i~f~~~~~~lat~~~d~~I 592 (712)
...++||.+.|..++| ++ + ++...+.+....+|++..+. + .+ |...|.+++|+|++++||+|+.|++|
T Consensus 7 ~~~~~~h~~~v~~~~~-s~--~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDF-SQ--G-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEECCSSCEEEEEE-ET--T-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ceeeccCCCceeeecc-CC--C-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4568899999999998 33 3 55555555555559987642 1 23 89999999999999999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC----CcEEEEeccCCCcEEEEEE
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR----SQVLTEMREHERRVWSIDF 668 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~----~~~~~~~~~H~~~v~sv~f 668 (712)
+|||+.................+|...|.+++|+| ++++||+|+.|++|+|||++. .+++.++.+|...|++++|
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99998642111111122234568999999999999 599999999999999999953 2578889999999999999
Q ss_pred ecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 669 SSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 669 sp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
+| ++.+|+|||.|++|++||+.++
T Consensus 162 ~p-~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 162 HP-SEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp CS-SSSEEEEEETTSCEEEEEEETT
T ss_pred CC-CCCEEEEEcCCCeEEEEECCCC
Confidence 98 8999999999999999999876
No 274
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.86 E-value=1.7e-20 Score=204.21 Aligned_cols=202 Identities=16% Similarity=0.208 Sum_probs=153.7
Q ss_pred CCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD 563 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~ 563 (712)
+...++++.|+|||..++....+. .......+.||...+..+.| + .++...+....++.++ |+++++.
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~--p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY-F--PSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-C--TTSSEEEEEETTSEEEEEETTTTE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEE-c--CCCCEEEEecCCCcEEEEECCCCe
Confidence 334588999999998764443332 12344578899999999999 3 3444444444455554 9999877
Q ss_pred ee---cCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC
Q 005147 564 LL---NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 639 (712)
Q Consensus 564 ~~---~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D 639 (712)
+. .+...|.+++|+| ++.+|++|+.|+.|++||++++..............+|...|++++|+| ++.+|++|+.|
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d 277 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLD 277 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred eEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCC
Confidence 54 4678899999999 8999999999999999999763211110000111247889999999999 69999999999
Q ss_pred CcEEEEECCC------------CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 640 GVVQVWDVSR------------SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 640 g~V~lwD~~~------------~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
|+|+|||+++ +.+..++.+|...|++++|+| ++.+|++||.|+.|++||+++++++..+
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEE
Confidence 9999999975 346778899999999999998 8999999999999999999999887654
No 275
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.86 E-value=4.5e-20 Score=193.51 Aligned_cols=199 Identities=17% Similarity=0.252 Sum_probs=161.6
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
+.+|...++++.|+|||..++....+.. ......+.+|...+..+.| ..++...++...++.+. |++.
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEE---cCCCCEEEEECCCCEEEEEECC
Confidence 4678889999999999987644333221 2234567899999999999 34555555555555554 9999
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
++++. +|...|.+++|+|++++|++|+.|++|++||+++. ........|...|++++|+| ++.+|++|
T Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 167 (312)
T 4ery_A 96 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-------KCLKTLPAHSDPVSAVHFNR-DGSLIVSS 167 (312)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECT-TSSEEEEE
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-------EEEEEecCCCCcEEEEEEcC-CCCEEEEE
Confidence 87643 68999999999999999999999999999999752 12234456888999999999 68999999
Q ss_pred eCCCcEEEEECCCCcEEEEec-cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 637 NFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~-~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.||.|++||+++++++..+. .|...+.+++|+| ++.+|++|+.|+.|++||+++++.+..+.
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEE
Confidence 999999999999999888774 5677899999998 99999999999999999999998876653
No 276
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.86 E-value=1.3e-20 Score=217.48 Aligned_cols=200 Identities=15% Similarity=0.175 Sum_probs=160.0
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEE-EEcCC---cE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKY-LSFSK---LR 554 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~-~~~~~---~~ 554 (712)
.+.+|...|++++|||||+.++....+. .......+.+|.+.+..+.| ++ ++...+ .+.+. +.
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~f-s~--dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW-DS--ESKRIAAVGEGRERFGH 130 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEE-CT--TSCEEEEEECCSSCSEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEE-CC--CCCEEEEEECCCCceeE
Confidence 3568888999999999999775543332 12223477899999999999 43 444333 33322 24
Q ss_pred EE-EEccC--CceecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 555 VK-ADLNQ--GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 555 v~-~dl~~--~~~~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
++ |+... +.+.+|...|.+++|+|++. .|++|+.|++|++||..+. .......+|...|++|+|+| ++
T Consensus 131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-------~~~~~l~~H~~~V~~v~fsp-dg 202 (611)
T 1nr0_A 131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-------KFKSTFGEHTKFVHSVRYNP-DG 202 (611)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-------EEEEEECCCSSCEEEEEECT-TS
T ss_pred EEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-------eEeeeeccccCceEEEEECC-CC
Confidence 44 65432 34568999999999999987 6999999999999998642 22334567999999999999 69
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEec-------cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 631 SQIASSNFEGVVQVWDVSRSQVLTEMR-------EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~~~~~~~-------~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.+||||+.|++|+|||+.+++++.++. +|.+.|++++|+| ++.+|+|||.|++|++||+++++++.++.
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 999999999999999999999999884 7999999999998 99999999999999999999998887664
No 277
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.86 E-value=2.7e-20 Score=201.67 Aligned_cols=201 Identities=15% Similarity=0.152 Sum_probs=159.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCC---------------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERS---------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 554 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (712)
+.+|...+.++.|+|||..++....+.. ......+.||.+.+..+.| .+..+..+...+.+...
T Consensus 104 ~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~-~~~~~~~l~s~s~D~~i 182 (380)
T 3iz6_a 104 IKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQY-VPDQETRLITGSGDQTC 182 (380)
T ss_dssp EECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBC-CSSSSSCEEEECTTSCE
T ss_pred EecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEE-ecCCCCEEEEECCCCcE
Confidence 3456777889999999986643322211 1123467899999999988 44445555666666656
Q ss_pred EEEEccCCce---------ecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEE
Q 005147 555 VKADLNQGDL---------LNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 624 (712)
Q Consensus 555 v~~dl~~~~~---------~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 624 (712)
.+||+.++.. .+|...|.+++|++ ++++|++|+.|++|++||++... .......+|...|++|+
T Consensus 183 ~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~------~~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 183 VLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS------RAVRTYHGHEGDINSVK 256 (380)
T ss_dssp EEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC------CCCEEECCCSSCCCEEE
T ss_pred EEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC------cceEEECCcCCCeEEEE
Confidence 6699887764 36899999999987 88999999999999999997421 22334568999999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC-------cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 625 WNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHER-------RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 625 ~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~-------~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
|+| ++.+|+||+.||+|+|||+++++++..+..|.. .|++++|+| ++.+|++|+.|+.|++||+.+++.+.
T Consensus 257 ~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 257 FFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEMVL 334 (380)
T ss_dssp ECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCEEE
T ss_pred Eec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC-CCCEEEEEECCCCEEEEECCCCceEE
Confidence 999 699999999999999999999999998876543 489999998 99999999999999999999998887
Q ss_pred EE
Q 005147 698 HL 699 (712)
Q Consensus 698 ~~ 699 (712)
.+
T Consensus 335 ~~ 336 (380)
T 3iz6_a 335 NL 336 (380)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 278
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.85 E-value=4.5e-20 Score=196.85 Aligned_cols=190 Identities=17% Similarity=0.218 Sum_probs=149.3
Q ss_pred CCCCCCccccccc-----CC-CCCCCCccccCCC---------------CCCceeeccCCCccceecccCCCCCCcEEEE
Q 005147 490 KPSGRPLVRHSQL-----SS-DGRTSKPLVNERS---------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYL 548 (712)
Q Consensus 490 ~~~~~~~~~~~~~-----~~-~g~~~~~~~~~~~---------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~ 548 (712)
+.+|...|+++.| ++ ||..++....++. ..+...+.||...+..+.| ..++...+.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~---~~~~~~l~s 93 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL---SQENCFAIS 93 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE---CSSTTEEEE
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEE---CCCCCEEEE
Confidence 4578888888887 65 7765533322211 1244578999999999999 345555455
Q ss_pred EcCCcEE-EEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEE---ecCCCCe
Q 005147 549 SFSKLRV-KADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE---MASRSKL 620 (712)
Q Consensus 549 ~~~~~~v-~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~---~~~~~~v 620 (712)
...++.+ +|+++++.. .+|.+.|.+++|+|++++|++|+.|++|++||+... ..... ..|...|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~--------~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE--------CKFSSAEKENHSDWV 165 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC--------EEEECCTTTSCSSCE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC--------ceeeeecccCCCcee
Confidence 5445555 499998764 479999999999999999999999999999998631 11111 2678899
Q ss_pred EEEEEcCCC---------CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 621 SSICWNSYI---------KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 621 ~~v~~~p~~---------~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
.+++|+|.. +.+|++|+.||+|++|| .+.+...++.+|...|++++|+| ++.+|++||.|++|++||++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISP-NGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTCEEEEEESS
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECC-CCCEEEEEcCCCeEEEEECC
Confidence 999999953 26999999999999999 55678889999999999999998 99999999999999999994
Q ss_pred C
Q 005147 692 Q 692 (712)
Q Consensus 692 ~ 692 (712)
.
T Consensus 244 ~ 244 (343)
T 2xzm_R 244 N 244 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 279
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.85 E-value=3.4e-20 Score=201.82 Aligned_cols=191 Identities=17% Similarity=0.232 Sum_probs=145.5
Q ss_pred CCCCcccccccCCCCCCCCccccCC-------CCCCceeeccCCC------------------ccceecccCCCCCCcEE
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNER-------SSINNLGSKEGYS------------------EGRRSGWINPFLEGLCK 546 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~l~gh~~------------------~~~~~~~~~~~~~~~~~ 546 (712)
+|...|.++.|||||+.++...... .......+.+|.. .+..+.| ..++...
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF---SPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEE---CTTSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEE---CCCCCEE
Confidence 4778899999999999775432111 0111223444432 3667888 3455544
Q ss_pred EEEcCCcE-EEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeE
Q 005147 547 YLSFSKLR-VKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (712)
Q Consensus 547 ~~~~~~~~-v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~ 621 (712)
++...++. .+|++.+++. .+|...|.+++|+|++++|++|+.|++|++||++++. ......+...+.
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~--------~~~~~~~~~~v~ 210 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ--------CSLTLSIEDGVT 210 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------EEEEEECSSCEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe--------eEEEEEcCCCcE
Confidence 44444444 4599988764 3799999999999999999999999999999997632 233445677899
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-------ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-------REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 622 ~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-------~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+++|+|.++.+|++|+.||+|++||++++..+..+ .+|...|++++|+| ++.+|++|+.|++|++||+++..
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC----
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCC
Confidence 99999977999999999999999999999988777 67999999999998 99999999999999999998643
No 280
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.85 E-value=1.9e-21 Score=205.29 Aligned_cols=199 Identities=15% Similarity=0.273 Sum_probs=152.6
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKAD 558 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d 558 (712)
...+|...|+++.|++||..++....+.. ......++||.+.|..+.|..+....++...+.+....+|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 35688899999999999997755443331 11345789999999999994333355666667666666799
Q ss_pred ccCCc------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-
Q 005147 559 LNQGD------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI- 629 (712)
Q Consensus 559 l~~~~------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~- 629 (712)
++++. +.+|...|.+++|+|+ +.+|++|+.|++|++||++.... ........+|...|.+++|+|..
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ----WEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC----EEECCBTTSSSSCBCCCEECCCCC
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC----cceeeeeccccCCcceEEEccccC
Confidence 98763 2369999999999997 78999999999999999975211 00112234688899999999842
Q ss_pred ---------------CCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCcEEEEEEecCCC----CEEEEEECCCcEEE
Q 005147 630 ---------------KSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDFSSADP----TLLASGSDDGSVKL 687 (712)
Q Consensus 630 ---------------~~~lasgs~Dg~V~lwD~~~~---~~~~~~~~H~~~v~sv~fsp~~~----~~l~sgs~D~~v~l 687 (712)
+.+|++|+.|++|+|||++.+ +++.++.+|...|++|+|+| ++ .+|||||.|++|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSSCSCCEEEEEETTCEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-CCCCCCceEEEEcCCCeEEE
Confidence 368999999999999999865 57788999999999999998 54 89999999999999
Q ss_pred EeCCC
Q 005147 688 WSINQ 692 (712)
Q Consensus 688 Wd~~~ 692 (712)
||+.+
T Consensus 243 w~~~~ 247 (316)
T 3bg1_A 243 WTCDD 247 (316)
T ss_dssp EECSS
T ss_pred EEccC
Confidence 99876
No 281
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.3e-20 Score=196.89 Aligned_cols=195 Identities=19% Similarity=0.268 Sum_probs=141.8
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC---------C-CCCceee-cc-CCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER---------S-SINNLGS-KE-GYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---------~-~~~~~~l-~g-h~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
+.+|...|.++.|+++ .++....+. . ......+ .+ |.+.+..+.| ++. ..++...+.+....+|
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~-sp~-~~~las~s~D~~v~iw 85 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW-RPH-TSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEE-CTT-SSEEEEEETTSCEEEE
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEE-CCC-CCEEEEEeCCCcEEEE
Confidence 4577788888888876 322222221 1 0111223 34 9999999999 442 2344444555555559
Q ss_pred EccC-------C----ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEc
Q 005147 558 DLNQ-------G----DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (712)
Q Consensus 558 dl~~-------~----~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 626 (712)
++.. . .+.+|.+.|.+++|+|++++||+|+.|++|++||++.... .........+|...|++++|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~---~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE---EYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC---CCEEEEEECCCSSCEEEEEEC
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC---CeEEEEEeccCCCceEEEEEC
Confidence 8842 1 2347999999999999999999999999999999953111 111223456799999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCcEEEEEEecCC--CCEEEEEECCCcEEEEeCCCC
Q 005147 627 SYIKSQIASSNFEGVVQVWDVSRS--QVLTEMREHERRVWSIDFSSAD--PTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 627 p~~~~~lasgs~Dg~V~lwD~~~~--~~~~~~~~H~~~v~sv~fsp~~--~~~l~sgs~D~~v~lWd~~~~ 693 (712)
| ++.+|++|+.|++|+|||++++ +++.++.+|...|++++|+| + +.+|+|||.|++|++||++.+
T Consensus 163 p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 163 P-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-TEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp S-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-SSSSCEEEEEETTSCEEEEEEEEE
T ss_pred C-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC-CCCeeEEEEEeCCCeEEEEEecCC
Confidence 9 5899999999999999999877 68899999999999999998 5 678999999999999998754
No 282
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.85 E-value=1.1e-20 Score=208.55 Aligned_cols=199 Identities=13% Similarity=0.089 Sum_probs=154.6
Q ss_pred CCCCcccccccCCC-CCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 492 SGRPLVRHSQLSSD-GRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 492 ~~~~~~~~~~~~~~-g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
++...|+++.|+|. +..++++..+. .....+.+.||.+.|.++.| +|.....+...+.+....+||++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f-~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKF-NPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEE-CSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEE-eCCCCCEEEEEeCCCEEEEeecc
Confidence 45667999999984 43333332221 22334567899999999999 55555566555555555569998
Q ss_pred CCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 561 QGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 561 ~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
++.+. .+...+++++|+|++.+|++|+.|+.|++||++.. ......+|...|++|+|+|....+|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--------~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--------ELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--------BCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--------eeEEEecccceEEeeeecCCCceEEE
Confidence 76532 13556889999999999999999999999998641 12234578999999999997667899
Q ss_pred EEeCCCcEEEEECCCCcEEE---EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 635 SSNFEGVVQVWDVSRSQVLT---EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~---~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|+.||+|+|||+++++... ...+|...|++|+|+| ++.+|++||.|++|+|||++++..+..+.
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred EecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence 99999999999999876433 3467999999999998 99999999999999999999998877665
No 283
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.85 E-value=5.3e-20 Score=196.61 Aligned_cols=166 Identities=16% Similarity=0.213 Sum_probs=136.1
Q ss_pred ceeeccCCC-ccceecccCCCCCCc-EEEEEcCCcEEEEEccCCce-------ecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 521 NLGSKEGYS-EGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQGDL-------LNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 521 ~~~l~gh~~-~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~~~~-------~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
.-++++|.+ .+..+.| ++ +|. +...+.+....+|++..+.. .+|...|.+++|+|++++||+|+.|++
T Consensus 8 ~~~~~~h~~~~v~~l~~-sp--~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAW-NP--AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEECCSTTSCEEEEEE-CT--TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeecCCCCCcEEEEEE-CC--CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 356789988 8999999 43 444 44444444445599887642 369999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCcEEEEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDF 668 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~---~~~~~~~~H~~~v~sv~f 668 (712)
|+|||+... .........+|...|++++|+| ++++|++|+.|++|+|||++++ .++..+.+|...|++++|
T Consensus 85 v~iw~~~~~-----~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 85 TCIWKKNQD-----DFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EEEEEECCC------EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred EEEEEccCC-----CeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 999998652 1122334568999999999999 6999999999999999999876 457788999999999999
Q ss_pred ecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 669 SSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 669 sp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+| ++.+|++|+.|++|++||++++..+
T Consensus 159 ~p-~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 159 HP-SQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp CS-SSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CC-CCCEEEEEeCCCcEEEEEecCCCEE
Confidence 98 8999999999999999999887643
No 284
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.84 E-value=1.8e-20 Score=203.10 Aligned_cols=180 Identities=16% Similarity=0.212 Sum_probs=139.8
Q ss_pred ceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
.-.|+||.+.|..+.| ++ ++ .+...+.+....+|++.++.. .+|...|.+++|+|++++||+||.|+.|++|
T Consensus 59 ~~~l~gH~~~V~~~~~-sp--~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDW-TP--EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEECCCSSCEEEEEE-CT--TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eecccccccEEEEEEE-cC--CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 3467888888888888 33 33 333344443334488876653 3689999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-----ccCCCcEEEEEEec
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-----REHERRVWSIDFSS 670 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-----~~H~~~v~sv~fsp 670 (712)
|+.+...............+|...|.++.|+|..+..|+||+.|++|++||+++++++..+ .+|...|.+++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 9976322212222223456899999999999976778999999999999999999999888 68999999999998
Q ss_pred CCCCEEEEEECCCcEEEEeCCCCcEEEEEecee
Q 005147 671 ADPTLLASGSDDGSVKLWSINQAILLLHLVDVS 703 (712)
Q Consensus 671 ~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~~ 703 (712)
.++.+|+|||.|++|++||++........+.+|
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h 248 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGH 248 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence 789999999999999999998543333444444
No 285
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.84 E-value=2.7e-19 Score=188.93 Aligned_cols=170 Identities=17% Similarity=0.181 Sum_probs=140.4
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC---------ceecCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG---------DLLNSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~---------~~~~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
.-+|+||.+.|..+.| ++....++...+.+....+|++... .+.+|...|.+++|+|++.+|++|+.|++
T Consensus 10 ~~~l~gH~~~V~~l~~-~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 10 RGTLEGHNGWVTSLAT-SAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEECCCSSCEEEEEE-CSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEccccceEEEEEc-cCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 3478899999999999 4444456666665555555988632 24589999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecC
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSA 671 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~ 671 (712)
|+|||+.++ .......+|...|.+++|+| ++.+|++|+.|++|++||++ ++++.++.+|...|.++.|+|.
T Consensus 89 v~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 89 LRLWDVATG-------ETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEETTTT-------EEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC
T ss_pred EEEEECCCC-------CeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccC
Confidence 999999763 22334568999999999999 58999999999999999996 6688899999999999999983
Q ss_pred -----CCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 672 -----DPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 672 -----~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++.++++|+.|++|++||+++++....+.
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 193 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI 193 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcchhheeec
Confidence 34589999999999999999887765543
No 286
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.1e-19 Score=194.40 Aligned_cols=200 Identities=16% Similarity=0.241 Sum_probs=159.4
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKAD 558 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d 558 (712)
.+.+|...+++..|++||..++....+. .......+.+|.+.+..+.|..+.....+...+.+....+|+
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 4567889999999999998764443332 122345788999999999993222244555555554455599
Q ss_pred ccCCc------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC--
Q 005147 559 LNQGD------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-- 628 (712)
Q Consensus 559 l~~~~------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-- 628 (712)
+.++. +.+|...|.+++|+|+ +.+|++++.|+.|++||+++. ..........|...|++++|+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN-----GTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT-----SCCCEEEEECCTTCEEEEEECCCC-
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC-----CceeeEEecCCCCceEEEEEcCccc
Confidence 98875 2258999999999999 999999999999999999762 11233456689999999999995
Q ss_pred ----------CCCEEEEEeCCCcEEEEECCCCc----EEEEeccCCCcEEEEEEecCC---CCEEEEEECCCcEEEEeCC
Q 005147 629 ----------IKSQIASSNFEGVVQVWDVSRSQ----VLTEMREHERRVWSIDFSSAD---PTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 629 ----------~~~~lasgs~Dg~V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~---~~~l~sgs~D~~v~lWd~~ 691 (712)
++.+|++|+.||.|++||++++. ++..+.+|...|++++|+| + +.+|++|+.|+.|++||++
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEEEEES
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCCCeEEEEeCCCEEEEEeCC
Confidence 58999999999999999998764 5678889999999999998 6 8999999999999999999
Q ss_pred CCc
Q 005147 692 QAI 694 (712)
Q Consensus 692 ~~~ 694 (712)
++.
T Consensus 240 ~~~ 242 (379)
T 3jrp_A 240 NEQ 242 (379)
T ss_dssp STT
T ss_pred CCC
Confidence 864
No 287
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.83 E-value=2.7e-19 Score=186.81 Aligned_cols=165 Identities=15% Similarity=0.154 Sum_probs=131.3
Q ss_pred eeeccCCCccceecccCCCCCCcE-EEEEcCCcEEEEEccCC------ceecCCCCeeEEEEcC--CCCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLC-KYLSFSKLRVKADLNQG------DLLNSSNLVCSLSFDR--DGELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~dl~~~------~~~~h~~~V~~i~f~~--~~~~lat~~~d~~I 592 (712)
+.+.||.+.|..+.| ..+|.. ...+.+....+|++..+ .+.+|.+.|.+++|++ ++++||||+.|++|
T Consensus 3 ~~~~~h~~~V~~~~~---s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 3 VIANAHNEMIHDAVM---DYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp EECCSCSSCEEEEEE---CTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eeccCCcCceEEEEE---CCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 567899999999999 344544 44444444455998642 3458999999999986 48999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCCc--EEEEeccCCCcEEEEEEe
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRSQ--VLTEMREHERRVWSIDFS 669 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~~--~~~~~~~H~~~v~sv~fs 669 (712)
+|||++++. .........|...|.+++|+|.. +.+|++|+.||+|++||++++. ....+.+|...|++++|+
T Consensus 80 ~iWd~~~~~-----~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 80 MIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp EEEEBSSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred EEEEcCCCc-----eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeec
Confidence 999997531 11223445789999999999942 7899999999999999998763 246788999999999999
Q ss_pred cC------------CCCEEEEEECCCcEEEEeCCCCc
Q 005147 670 SA------------DPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 670 p~------------~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|. ++.+||+||.|++|+|||++++.
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTT
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 83 25799999999999999998766
No 288
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.83 E-value=1.4e-19 Score=206.06 Aligned_cols=186 Identities=23% Similarity=0.307 Sum_probs=150.3
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC-------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER-------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~ 561 (712)
..+|...++++.|+|||..++....++ .......+.+|...+.++.| ..++...+....++.+. |++..
T Consensus 381 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~---s~d~~~l~~~~~d~~v~~w~~~~ 457 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAF---SPDDQTIASASDDKTVKLWNRNG 457 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETTS
T ss_pred ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEE---CCCCCEEEEEcCCCEEEEEECCC
Confidence 346777899999999999774433222 22334577899999999999 34444444444455544 88653
Q ss_pred C---ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 562 G---DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 562 ~---~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
. .+.+|...|.+++|+|++.+||+++.|++|++||... .......+|...|++|+|+| ++.+||+|+.
T Consensus 458 ~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~--------~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~ 528 (577)
T 2ymu_A 458 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVRGVAFSP-DGQTIASASD 528 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS--------CEEEEEECCSSCEEEEEECT-TSSCEEEEET
T ss_pred CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--------CEEEEEeCCCCCEEEEEEcC-CCCEEEEEEC
Confidence 3 2447999999999999999999999999999999642 22345568999999999999 6999999999
Q ss_pred CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
||.|+|||. +++++.++.+|...|++++|+| |+.+|+|||.|++|++||
T Consensus 529 dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~-dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 529 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred cCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEeC
Confidence 999999995 6889999999999999999998 999999999999999998
No 289
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.83 E-value=1.6e-19 Score=211.32 Aligned_cols=203 Identities=18% Similarity=0.228 Sum_probs=159.7
Q ss_pred CCCCCCCcccccccCCCCCC-CCccccCC---------C----CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE
Q 005147 489 VKPSGRPLVRHSQLSSDGRT-SKPLVNER---------S----SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 554 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~---------~----~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (712)
.+.+|...|+++.|++++.. ++....+. . ......+.||...+..+.| +.++...++...++.
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~---s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL---SSDGQFALSGSWDGE 453 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEE---CCCCCEEEEEeCCCc
Confidence 46689999999999988653 22222221 1 1223468899999999999 445555555555555
Q ss_pred EE-EEccCCc----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC
Q 005147 555 VK-ADLNQGD----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 629 (712)
Q Consensus 555 v~-~dl~~~~----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~ 629 (712)
++ |++.++. +.+|...|.+++|+|++.+|+|||.|++|+|||...... ........+|...|+|++|+|..
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK----YTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE----EEECSSTTSCSSCEEEEEECSCS
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc----eeeccCCCCCCCcEEEEEEeCCC
Confidence 54 9998775 347999999999999999999999999999999854110 00000113688899999999953
Q ss_pred -CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 630 -KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 630 -~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
...|++|+.||+|+|||++++++..++.+|...|++++|+| ++.+|+|||.|++|+|||+++++.+..+
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 25899999999999999999999999999999999999998 9999999999999999999999887654
No 290
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.82 E-value=2.8e-20 Score=200.14 Aligned_cols=193 Identities=13% Similarity=0.058 Sum_probs=145.6
Q ss_pred CCcccccccCCCCCCCCccccCCC--------C--CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc
Q 005147 494 RPLVRHSQLSSDGRTSKPLVNERS--------S--INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD 563 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~~~~~--------~--~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~ 563 (712)
...++++.|+|||..++....+.. . .+...+.+|.+.+..+.| ++. ...+...+.+....+|++.++.
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~-s~~-~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDW-APK-SNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEE-CTT-TCCEEEEETTSSEEEC------
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEE-eCC-CCEEEEEeCCCeEEEEEcCCCC
Confidence 446889999999987644433321 1 345678899999999999 332 2345555555555569998765
Q ss_pred -------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec-CCCCeEEEEEcCCCCCEEEE
Q 005147 564 -------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 564 -------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~las 635 (712)
+.+|...|.+++|+|++++|++|+.|+.|++||+++... ......... |...|++++|+| ++.+|++
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~ 163 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND----WWVSKHLKRPLRSTILSLDWHP-NNVLLAA 163 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---------CCCCEEECSSCCSCEEEEEECT-TSSEEEE
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc----ceeeeEeecccCCCeEEEEEcC-CCCEEEE
Confidence 336899999999999999999999999999999976321 111223334 899999999999 6899999
Q ss_pred EeCCCcEEEEECC------------------CCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 636 SNFEGVVQVWDVS------------------RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 636 gs~Dg~V~lwD~~------------------~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
|+.||+|++||++ .++++.++ +|...|++++|+| ++.+|++|+.|++|++||++++..
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECSTTS
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCC
Confidence 9999999999985 45677778 9999999999998 999999999999999999999876
No 291
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.82 E-value=1.1e-18 Score=183.50 Aligned_cols=193 Identities=17% Similarity=0.156 Sum_probs=154.7
Q ss_pred cccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce--
Q 005147 496 LVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL-- 564 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~-- 564 (712)
.+.+..|+|||+.++...... .....+...+|...+..+.| ..++...+... ++.+. |++.++..
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTI---SNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEE---CSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred ceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEE---ecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 467789999999763322111 11233456699999999999 34555555555 45544 99976531
Q ss_pred --e-----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 565 --L-----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 565 --~-----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
. +|...|.+++|+|++++|++++.|+.|++||+.+.. .........|...|.+++|+| ++++|++++
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 160 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-----PRIKAELTSSAPACYALAISP-DSKVCFSCC 160 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECT-TSSEEEEEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC-----cceeeecccCCCceEEEEECC-CCCEEEEEe
Confidence 1 688999999999999999999999999999997621 112334567888999999999 689999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.||.|++||+++++.+..+..|...|++++|+| ++.+|++++.|+.|++||+++++.+..+
T Consensus 161 ~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 221 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQH 221 (337)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEeCCCCceeeeeecccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeee
Confidence 999999999999999999999999999999998 8999999999999999999999887665
No 292
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.82 E-value=9.1e-20 Score=205.82 Aligned_cols=161 Identities=12% Similarity=0.062 Sum_probs=132.5
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-----eecCCCCeeEE--EEcCCC-CEEEEEeCCCc
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-----LLNSSNLVCSL--SFDRDG-ELFAAAGVNKK 591 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-----~~~h~~~V~~i--~f~~~~-~~lat~~~d~~ 591 (712)
|...+.+|.+.+.+++| ++ ++.+...+.+....+||++++. +.+|.+.|.+| .|+|++ .+|||||.|++
T Consensus 258 p~~~l~~h~~~v~sv~~-s~--~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t 334 (524)
T 2j04_B 258 PSLTLSLADSLITTFDF-LS--PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY 334 (524)
T ss_dssp CSEEECCTTTCEEEEEE-SS--SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE
T ss_pred ceEEEEcCCCCEEEEEe-cC--CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe
Confidence 45688999999999999 33 4565555555555559998653 44799999999 578887 89999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCC--CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEe
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fs 669 (712)
|+|||+++.. +.....+|. ..|.+|+|+| ++..|++++.|++|+|||++++.++.++.+|.+.|++|+|+
T Consensus 335 vklWD~~~~~-------~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 335 FYIFNPKDIA-------TTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp EEEECGGGHH-------HHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECC
T ss_pred EEEEECCCCC-------cccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeC
Confidence 9999997632 122223343 3588999999 58899999999999999999999989999999999999999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCC
Q 005147 670 SADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
| ++.+|+|||.|++|++||+..
T Consensus 407 p-~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 407 R-LHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp S-SCCBCEEEETTTEEECCBSCS
T ss_pred C-CCCeEEEEECCCEEEEEechH
Confidence 8 899999999999999999754
No 293
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.82 E-value=4.7e-19 Score=191.19 Aligned_cols=201 Identities=14% Similarity=0.156 Sum_probs=155.4
Q ss_pred CCCCCCCcccccccCCCC-CCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDG-RTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g-~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
...+|...++++.|+++| ..++....+. .....+.+.+|.+.+..+.| ++.....+...+.+....+|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKF-NQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEE-ETTEEEEEEEEETTTEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEe-CCCCCCEEEEEeCCCEEEEE
Confidence 356788899999999999 5443332221 12223344589999999999 44333444444444444559
Q ss_pred EccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCC
Q 005147 558 DLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631 (712)
Q Consensus 558 dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 631 (712)
++...... +|...|.+++|+|++.+|++|+.|+.|++||++. ........|...|.+++|+|. +.
T Consensus 147 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~--------~~~~~~~~h~~~v~~~~~~~~-~~ 217 (383)
T 3ei3_B 147 DFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG--------HEIFKEKLHKAKVTHAEFNPR-CD 217 (383)
T ss_dssp ETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS--------CEEEEEECSSSCEEEEEECSS-CT
T ss_pred ECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC--------CEEEEeccCCCcEEEEEECCC-CC
Confidence 99864432 2458899999999999999999999999999842 223445679999999999995 55
Q ss_pred -EEEEEeCCCcEEEEECCC----CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 632 -QIASSNFEGVVQVWDVSR----SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 632 -~lasgs~Dg~V~lwD~~~----~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|++|+.||+|++||+++ +.++..+ +|...|++++|+|.++.+|++|+.|+.|++||++++..+..+.
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 999999999999999998 6677777 6999999999997689999999999999999999988765554
No 294
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.81 E-value=1.7e-18 Score=182.69 Aligned_cols=176 Identities=19% Similarity=0.281 Sum_probs=136.0
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc---------eecCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD---------LLNSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~---------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
+|+||.+.|..++| +|....++...+.|....+|++..+. +.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 33 tL~GH~~~V~~v~~-sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 33 TLKGHNGWVTQIAT-TPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EECCCSSCEEEEEE-CTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EECCccCCEEEEEE-eCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence 57888888888888 55444455555555555558876432 346888899999999999999999999999
Q ss_pred EEEcCCccccC------------------------------------cccccceEEecCCCCeEEEEEcCCC-CCEEEEE
Q 005147 594 VFECDAIINEN------------------------------------RDIHYPVVEMASRSKLSSICWNSYI-KSQIASS 636 (712)
Q Consensus 594 iwD~~~~~~~~------------------------------------~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasg 636 (712)
+|+........ ..........+|...+.+++|++.. ..+++++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 112 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 98887521000 0000011223577889999998753 3478999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.|++|++||+++++++..+.+|.+.|++++|+| ++.+|++|+.|++|++||+++++.+..+.
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 254 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLD 254 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeec
Confidence 9999999999999999999999999999999998 99999999999999999999998876654
No 295
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=2.8e-19 Score=187.10 Aligned_cols=181 Identities=14% Similarity=0.136 Sum_probs=129.7
Q ss_pred CCCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCC-CCCcEEEE-EcCCcEEEEEccCCcee--
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPF-LEGLCKYL-SFSKLRVKADLNQGDLL-- 565 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~-~~~~~~~~-~~~~~~v~~dl~~~~~~-- 565 (712)
..+|.+.|+...+++||+.. ..+.+|...+..+.| ++. .++...+. +.|....+||+++|+++
T Consensus 152 ~~g~d~~V~~~~~s~dG~~~------------~s~~~~~~~v~~l~f-s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~t 218 (356)
T 2w18_A 152 GTLSDQQVEVMTFAEDGGGK------------ENQFLMPPEETILTF-AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKK 218 (356)
T ss_dssp SSSTTCEEEEEEECTTSCEE------------EEEEECCCSSCEEEE-EEEETSTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ccCCCCcEEEEEECCCCcee------------eeeccCCCceeeEEe-eccCCCCceEEEecCCCcEEEEECCCCcEEEE
Confidence 35688899999999998865 356688888888888 331 23444444 44444445888887654
Q ss_pred --cC---CCCeeEEEEcCCCCEE------------EEEeCCCcEEEEEcCCccccCcccccceE-EecCCCCeEEEEEcC
Q 005147 566 --NS---SNLVCSLSFDRDGELF------------AAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNS 627 (712)
Q Consensus 566 --~h---~~~V~~i~f~~~~~~l------------at~~~d~~I~iwD~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p 627 (712)
+| ...|.+++|+|+|.++ ++|+.|++|++||..++...... .+. ..+|...+.+.+++
T Consensus 219 L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~---~~~~p~Gh~~~~lsg~~s- 294 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM---LYCLPPGQAGRFLEGDVK- 294 (356)
T ss_dssp EECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE---EECCCTTCCCCEEEEEEE-
T ss_pred EcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE---EeeccCCCcceeEccccC-
Confidence 23 3467888999999876 67889999999999764221100 000 12455555555554
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEE-EEEEecCCCCEEEEEECCCcEEEEeC
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVW-SIDFSSADPTLLASGSDDGSVKLWSI 690 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~-sv~fsp~~~~~l~sgs~D~~v~lWd~ 690 (712)
+.++|+|+.||+|+|||+.+++++.++.+|...+. +++|+| |+++|+|||.|++|+|||+
T Consensus 295 --g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 295 --DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred --CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecC
Confidence 67899999999999999999999999999988766 589998 9999999999999999996
No 296
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.81 E-value=1.1e-18 Score=186.47 Aligned_cols=200 Identities=13% Similarity=0.099 Sum_probs=157.9
Q ss_pred CCCcccccccCCCCCCCCccccCCC--------CC--CceeeccCCCccceecccCCCCCCcEEEE-EcCCcEEEEEccC
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNERS--------SI--NNLGSKEGYSEGRRSGWINPFLEGLCKYL-SFSKLRVKADLNQ 561 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~~--------~~--~~~~l~gh~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~dl~~ 561 (712)
|...++++.|+|||..+++...+.. .. ....+.+|...+..+.| ++ ++...+. +.+....+|++.+
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~-~~--~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDW-AP--DSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEE-ET--TTTEEEEEETTSCEEEEEEET
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEE-eC--CCCEEEEEcCCCeEEEEECCC
Confidence 5667889999999987644422221 11 45678899999999999 33 4444444 4444444599987
Q ss_pred Cce------ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 562 GDL------LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 562 ~~~------~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
+++ ..|...|.+++|+|++++|++|+.|+.|++||++.... ..........|...|++++|+| ++++|++
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~---~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 159 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND---WWVCKHIKKPIRSTVLSLDWHP-NSVLLAA 159 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT---EEEEEEECTTCCSCEEEEEECT-TSSEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCc---ceeeeeeecccCCCeeEEEEcC-CCCEEEE
Confidence 752 35899999999999999999999999999999975211 0011122356789999999999 6899999
Q ss_pred EeCCCcEEEEEC------------------CCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 636 SNFEGVVQVWDV------------------SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 636 gs~Dg~V~lwD~------------------~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
|+.||.|++||+ .+++++..+.+|...|++++|+| ++.+|++|+.|+.|++||+++++++.
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeE
Confidence 999999999995 46789999999999999999998 89999999999999999999998887
Q ss_pred EEe
Q 005147 698 HLV 700 (712)
Q Consensus 698 ~~~ 700 (712)
.+.
T Consensus 239 ~~~ 241 (372)
T 1k8k_C 239 TLA 241 (372)
T ss_dssp EEE
T ss_pred EEc
Confidence 664
No 297
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.81 E-value=1.2e-18 Score=183.69 Aligned_cols=164 Identities=13% Similarity=0.257 Sum_probs=130.2
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEE-EcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYL-SFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
.....+.+|...+..+.| ++.....+.+. +.+....+|+++++.+. +|.+.|.+++|+|++++|++|+.|++|+
T Consensus 162 ~~~~~~~~~~~~v~~~~~-~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~ 240 (340)
T 4aow_A 162 KYTVQDESHSEWVSCVRF-SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAM 240 (340)
T ss_dssp EEEECSSSCSSCEEEEEE-CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred eEEEEeccccCcccceEE-ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 344567789999888888 44444444444 44444445999887643 6899999999999999999999999999
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe---------ccCCCcEE
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM---------REHERRVW 664 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~---------~~H~~~v~ 664 (712)
+||+++. .++....+...|.+++|+| ...+++++.|+.|+|||++++..+..+ .+|...|+
T Consensus 241 iwd~~~~--------~~~~~~~~~~~v~~~~~~~--~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (340)
T 4aow_A 241 LWDLNEG--------KHLYTLDGGDIINALCFSP--NRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCT 310 (340)
T ss_dssp EEETTTT--------EEEEEEECSSCEEEEEECS--SSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEE
T ss_pred EEEeccC--------ceeeeecCCceEEeeecCC--CCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEE
Confidence 9999762 2344556678899999998 346677778999999999998777665 36889999
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 665 SIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 665 sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+++|+| ++++|+|||.||+|+|||+++|.
T Consensus 311 ~l~~s~-dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 311 SLAWSA-DGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECT-TSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEECC-CCCEEEEEeCCCEEEEEeCCCcC
Confidence 999998 99999999999999999999885
No 298
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.80 E-value=2.4e-18 Score=188.75 Aligned_cols=203 Identities=17% Similarity=0.217 Sum_probs=147.8
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
..+|...|+++.|+|||..+++...+. .......+.+|...+..+.| + ..++...+.+....+|+...
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~-~---~~~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW-N---SYILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-E---TTEEEEEETTSEEEEEETTS
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee-C---CCEEEEEeCCCceeEeeecc
Confidence 446777899999999999775544332 12345678899999988887 2 23444444444444588875
Q ss_pred Cc-----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc-----------------------------
Q 005147 562 GD-----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI----------------------------- 607 (712)
Q Consensus 562 ~~-----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~----------------------------- 607 (712)
.. +.+|...++.+.|+|++.++++++.|+.|++||..+........
T Consensus 219 ~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 219 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred cceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 32 45799999999999999999999999999999987632110000
Q ss_pred ------------ccceEEecCCCCeEEEEEcCCCCCEEEEEe--CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCC
Q 005147 608 ------------HYPVVEMASRSKLSSICWNSYIKSQIASSN--FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673 (712)
Q Consensus 608 ------------~~~~~~~~~~~~v~~v~~~p~~~~~lasgs--~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~ 673 (712)
........+...+.++.|+|. +..+++++ .||.|+|||+.+++++.++.+|.++|++|+|+| ++
T Consensus 299 ~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~-~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp-dg 376 (420)
T 4gga_A 299 SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DG 376 (420)
T ss_dssp TTCEEEEEETTTTEEEEEEECSSCEEEEEEETT-TTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-TS
T ss_pred CCCEEEEEeCCccccceeeccccceeeeeecCC-CCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CC
Confidence 001111223455667777774 55555543 688899999999999999999999999999998 99
Q ss_pred CEEEEEECCCcEEEEeCCCCcEEEE
Q 005147 674 TLLASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 674 ~~l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
.+|||||.|++|+|||+....+...
T Consensus 377 ~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 377 ATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp SCEEEEETTTEEEEECCSCSSCC--
T ss_pred CEEEEEecCCeEEEEECCCCCccch
Confidence 9999999999999999987665543
No 299
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.80 E-value=5.2e-18 Score=180.43 Aligned_cols=206 Identities=14% Similarity=0.098 Sum_probs=162.4
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~ 560 (712)
+.+|...+++..|+|||..+++...+. ...+...+.+|.+.+..+.| ++ ++...+....++. .+|++.
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~~--~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV-DC--FTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEE-CT--TSSEEEEEETTTEEEEEETT
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEE-cC--CCCEEEEEeCCCeEEEEECC
Confidence 557888899999999998664433222 23455678899999999999 33 4444444444555 449999
Q ss_pred CCcee---cCCCCeeEEEEcCCCCEEEEEeCC-----CcEEEEEcCCccccCcc----cccceEEecCCC--CeEEEEEc
Q 005147 561 QGDLL---NSSNLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRD----IHYPVVEMASRS--KLSSICWN 626 (712)
Q Consensus 561 ~~~~~---~h~~~V~~i~f~~~~~~lat~~~d-----~~I~iwD~~~~~~~~~~----~~~~~~~~~~~~--~v~~v~~~ 626 (712)
+++.. .|...|.+++|+|++.+|++++.+ +.|++||+......... .........|.. .+.+++|+
T Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 105 NGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred CCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 87654 478999999999999999999999 99999999763221110 011223344555 89999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCC-CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 627 SYIKSQIASSNFEGVVQVWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 627 p~~~~~lasgs~Dg~V~lwD~~~-~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
| ++++|++|+.||.|.+||+++ ++.+..+..|...|.+++|+| ++.+|++|+.|+.|++||+++++.+..+.
T Consensus 185 ~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 185 T-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp G-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred C-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC-CCCEEEEecCCceEEEEECCCCceeeeec
Confidence 9 689999999999999999999 789999999999999999998 99999999999999999999998887664
No 300
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.2e-18 Score=205.84 Aligned_cols=199 Identities=16% Similarity=0.216 Sum_probs=157.9
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKA 557 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~ 557 (712)
...+|...+++..|+|||..+++...+. .......+.+|.+.|..+.| ++..++ .+...+.+....+|
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~-s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDW-AHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEE-CCTTSCSEEEEEETTSCEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEe-cCCCCCCEEEEEeCCCeEEEE
Confidence 3568899999999999998764443322 12344578899999999999 443334 44444444444559
Q ss_pred EccCCc------eecCCCCeeEEEEcCC--CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC-
Q 005147 558 DLNQGD------LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY- 628 (712)
Q Consensus 558 dl~~~~------~~~h~~~V~~i~f~~~--~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~- 628 (712)
++.++. +.+|...|.+++|+|+ +++|++|+.|++|++||+++.. .........|...|++++|+|.
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~-----~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-----TTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS-----CCCCEEEECCSSCEEEEEECCCC
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC-----CcceeEeecCCCceEEEEecCcc
Confidence 998875 2358999999999999 9999999999999999997631 2234556789999999999995
Q ss_pred -----------CCCEEEEEeCCCcEEEEECCCC----cEEEEeccCCCcEEEEEEecCC---CCEEEEEECCCcEEEEeC
Q 005147 629 -----------IKSQIASSNFEGVVQVWDVSRS----QVLTEMREHERRVWSIDFSSAD---PTLLASGSDDGSVKLWSI 690 (712)
Q Consensus 629 -----------~~~~lasgs~Dg~V~lwD~~~~----~~~~~~~~H~~~v~sv~fsp~~---~~~l~sgs~D~~v~lWd~ 690 (712)
++.+|++|+.||+|++||++++ .++.++.+|...|++++|+| + +.+|++|+.||+|++||+
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEESSSCEEEEEE
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCCCCCEEEEEecCCEEEEecC
Confidence 4889999999999999999987 56778899999999999998 6 899999999999999999
Q ss_pred CCCc
Q 005147 691 NQAI 694 (712)
Q Consensus 691 ~~~~ 694 (712)
+++.
T Consensus 237 ~~~~ 240 (753)
T 3jro_A 237 DNEQ 240 (753)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 8864
No 301
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.80 E-value=5.4e-19 Score=194.96 Aligned_cols=168 Identities=14% Similarity=0.151 Sum_probs=135.9
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc------eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEE
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD------LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVF 595 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~------~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iw 595 (712)
...+|...|..++| +|..+.++++.+.+....+|++.+++ +.+|.+.|++|+|+| ++++|+|||.|++|+||
T Consensus 114 ~~~~~~~~V~~l~~-~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 114 KAAPFDRRATSLAW-HPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEEECSSCEEEEEE-CSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred cCCCCCCCEEEEEE-eCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 45688889999999 88777787777777666779997654 237999999999998 78999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCE
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~ 675 (712)
|+++... ........+...+.+++|+| ++.+|++|+.||.|++||++ ++.+.++.+|...|++|+|+|....+
T Consensus 193 d~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 193 DFKGNIL-----RVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp ETTSCEE-----EEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSE
T ss_pred eccCCce-----eEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceE
Confidence 9965210 10011122345678999999 69999999999999999986 46677899999999999999955679
Q ss_pred EEEEECCCcEEEEeCCCCcEEEE
Q 005147 676 LASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 676 l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
|++||.|++|+|||++++.....
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~ 288 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKAS 288 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSC
T ss_pred EEEecCcceeeEEecccccccce
Confidence 99999999999999988765433
No 302
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.79 E-value=6.5e-18 Score=183.85 Aligned_cols=163 Identities=15% Similarity=0.197 Sum_probs=129.1
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCC
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 617 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~ 617 (712)
+..+|.+.+|+.+..... ......+.+|.+.|.+++|+| ++++|++|+.|++|+|||+.+...............+|.
T Consensus 53 ~~~~g~i~v~~~~~~~~~-~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRV-DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CSSSCCEEEEETTCCEEC-CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred EcCCCEEEEEECccCCCC-CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC
Confidence 445555555555332211 001123557999999999999 899999999999999999986422111112344566899
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe--ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM--REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~--~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
..|++++|+|...++|++|+.||+|+|||+++++++.++ .+|...|++++|+| ++.+|++|+.|+.|++||+++++.
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCce
Confidence 999999999954479999999999999999999999999 88999999999998 999999999999999999999998
Q ss_pred EEEEecee
Q 005147 696 LLHLVDVS 703 (712)
Q Consensus 696 v~~~~~~~ 703 (712)
+..+...+
T Consensus 211 ~~~~~~~~ 218 (402)
T 2aq5_A 211 VAEKDRPH 218 (402)
T ss_dssp EEEEECSS
T ss_pred eeeeccCC
Confidence 87763333
No 303
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.79 E-value=5.5e-18 Score=186.23 Aligned_cols=197 Identities=14% Similarity=0.103 Sum_probs=145.1
Q ss_pred cccCCCCCCCCccc-cCCCCCCceee-ccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccC---Cc-----ee-cC
Q 005147 500 SQLSSDGRTSKPLV-NERSSINNLGS-KEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQ---GD-----LL-NS 567 (712)
Q Consensus 500 ~~~~~~g~~~~~~~-~~~~~~~~~~l-~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~---~~-----~~-~h 567 (712)
..|+++|..++... -.........+ ++|.+.+..+.| ++. ++...++...++.+ +|++.. +. +. +|
T Consensus 33 ~~f~~~~~~~~~~~~w~~~g~~~~~~~~~h~~~V~~~~~-s~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h 110 (437)
T 3gre_A 33 KEFGPIQEIVRSPNMGNLRGKLIATLMENEPNSITSSAV-SPG-ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDC 110 (437)
T ss_dssp GGGCCCCCCCCCCCGGGCCCCEEEEECTTTTSCEEEEEE-ECS-SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEEC
T ss_pred hhcCCccccccccccccccceEEeeeccCCCCceEEEEE-CCC-CCCEEEEecCCceEEEeECcccccCcccceeeeccC
Confidence 44566666553221 01122344566 899999999999 332 44444444455555 499876 32 22 68
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC---ccccCcccccceEEe---c--CCCCeEEEE--EcCCCCCEEEEEe
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDA---IINENRDIHYPVVEM---A--SRSKLSSIC--WNSYIKSQIASSN 637 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~---~~~~~~~~~~~~~~~---~--~~~~v~~v~--~~p~~~~~lasgs 637 (712)
.+.|.+++|+|++++|++|+.|++|++||+.. +..........+... . +...+.++. ++| ++.+|++|+
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 189 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALT 189 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEe
Confidence 99999999999999999999999999999952 111000000111111 1 566777877 556 588999999
Q ss_pred CCCcEEEEECCCCcEEEEecc--CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~--H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.||.|++||+++++++.++.+ |...|++++|+| ++.+|++|+.|++|++||+++++++..+.
T Consensus 190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (437)
T 3gre_A 190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWS 253 (437)
T ss_dssp TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEB
T ss_pred CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEe
Confidence 999999999999999999998 899999999998 89999999999999999999998887764
No 304
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.79 E-value=3.7e-18 Score=194.40 Aligned_cols=196 Identities=23% Similarity=0.280 Sum_probs=154.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccC-------CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE-------RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~ 561 (712)
..++...+.++.|+|||..++....+ ........+.+|...+.++.| ..++...+....++.+ +|+...
T Consensus 340 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~---s~dg~~l~~~~~d~~v~~~~~~~ 416 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAF---SPDGQTIASASDDKTVKLWNRNG 416 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEE---CTTSSCEEEEETTSEEEEECTTC
T ss_pred EeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEE---CCCCCEEEEEeCCCEEEEEeCCC
Confidence 45667788899999999876433222 122334567899999999998 3444444444444554 488543
Q ss_pred C---ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 562 G---DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 562 ~---~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
. .+.+|...|.+++|+|++++|++++.|++|++||... .......+|...|++++|+| ++.+||+++.
T Consensus 417 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~--------~~~~~~~~~~~~v~~~~~sp-d~~~las~~~ 487 (577)
T 2ymu_A 417 QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVRGVAFSP-DGQTIASASD 487 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS--------CEEEEEECCSSCEEEEEECT-TSCEEEEEET
T ss_pred CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC--------CEEEEEcCCCCCEEEEEEcC-CCCEEEEEeC
Confidence 2 2447999999999999999999999999999999743 22345568999999999999 6999999999
Q ss_pred CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|++|+|||. +++++.++.+|...|++|+|+| ++.+||+|+.|+.|+|||. +++++..+.
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~~~~~ 546 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLT 546 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred CCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCEEEEEc
Confidence 999999994 7889999999999999999998 9999999999999999996 567665543
No 305
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.79 E-value=7.5e-18 Score=175.88 Aligned_cols=199 Identities=17% Similarity=0.203 Sum_probs=146.1
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
..+|...|+++.|+++|..++....+. .......+.+|...+....+ ....+...+.+.....|+...
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~----~~~~l~s~~~~~~~~~~~~~~ 138 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW----NSYILSSGSRSGHIHHHDVRV 138 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE----ETTEEEEEETTSEEEEEETTS
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec----CCCEEEEEecCCceEeeecCC
Confidence 456777899999999999764443332 12344567899888765554 223444444444444477665
Q ss_pred Cc-----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc------------------------------
Q 005147 562 GD-----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD------------------------------ 606 (712)
Q Consensus 562 ~~-----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~------------------------------ 606 (712)
+. +.+|...+.++.|++++++|++++.|++|++||++++......
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 139 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred CceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC
Confidence 42 4479999999999999999999999999999999863211000
Q ss_pred -----------cccceEEecCCCCeEEEEEcCCCCCEEEEE--eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCC
Q 005147 607 -----------IHYPVVEMASRSKLSSICWNSYIKSQIASS--NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673 (712)
Q Consensus 607 -----------~~~~~~~~~~~~~v~~v~~~p~~~~~lasg--s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~ 673 (712)
.........+...+.+++|+|. +..++++ +.||.|+|||+++++++.++.+|.+.|++|+|+| ++
T Consensus 219 ~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp-dg 296 (318)
T 4ggc_A 219 SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DG 296 (318)
T ss_dssp TTCEEEEEETTTCCEEEEEECSSCEEEEEEETT-TTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-TS
T ss_pred CCCEEEEEecccccccccccceeeeeeeeeccc-ccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CC
Confidence 0001122334566788899985 5555554 4799999999999999999999999999999998 99
Q ss_pred CEEEEEECCCcEEEEeCCCCc
Q 005147 674 TLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 674 ~~l~sgs~D~~v~lWd~~~~~ 694 (712)
.+|||||.|++|+|||+.+..
T Consensus 297 ~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 297 ATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp SCEEEEETTTEEEEECCSCCC
T ss_pred CEEEEEecCCeEEEEECCCCC
Confidence 999999999999999998654
No 306
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.5e-18 Score=186.85 Aligned_cols=203 Identities=17% Similarity=0.233 Sum_probs=159.6
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC------------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER------------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
...+...+++..|++||..++....+. ...+...+.+|.+.+..+.| ++....++...+.+....+|
T Consensus 63 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF-NAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE-CSSSTTBEEEECSSSCEEBC
T ss_pred EEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE-cCCCCCEEEEEcCCCeEEEE
Confidence 345677899999999998764332221 11355678899999999999 44434455555444444459
Q ss_pred EccCCc-------------eecCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEec------CC
Q 005147 558 DLNQGD-------------LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA------SR 617 (712)
Q Consensus 558 dl~~~~-------------~~~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~------~~ 617 (712)
++.++. ..+|...|.+++|+|+ +.+|++|+.|+.|++||+++... ...... |.
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE-------VIHLSYTSPNSGIK 214 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE-------EEEECCCCCSSCCC
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc-------ceEEeccccccccC
Confidence 998765 1358899999999998 78999999999999999976311 111222 27
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCC---cEEEEECCCC-cEEEEec-cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 618 SKLSSICWNSYIKSQIASSNFEG---VVQVWDVSRS-QVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg---~V~lwD~~~~-~~~~~~~-~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
..|++++|+|....+|++++.|+ .|++||++++ .++..+. +|...|++++|+|.++.+|++|+.|++|++||+++
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 88999999996557999999999 9999999997 6788888 99999999999987899999999999999999999
Q ss_pred CcEEEEEe
Q 005147 693 AILLLHLV 700 (712)
Q Consensus 693 ~~~v~~~~ 700 (712)
++++..+.
T Consensus 295 ~~~~~~~~ 302 (416)
T 2pm9_A 295 AEQLSQFP 302 (416)
T ss_dssp CCEEEEEE
T ss_pred Cccceeec
Confidence 98887664
No 307
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.79 E-value=9.2e-19 Score=192.43 Aligned_cols=203 Identities=12% Similarity=0.097 Sum_probs=151.8
Q ss_pred CCCcccccccCCCCCCCCccccCCC---------C----------CCceeeccCC------------CccceecccCCCC
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNERS---------S----------INNLGSKEGY------------SEGRRSGWINPFL 541 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~~---------~----------~~~~~l~gh~------------~~~~~~~~~~~~~ 541 (712)
+...|+++.|+|||..++....+.. . .....+.||. +.+..+.| ++..
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~-~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW-LPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE-CCCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE-cCCC
Confidence 3457899999999987644432221 0 1255788998 88999999 4433
Q ss_pred C-CcEEEEEcCCcEEEEEccCCce--------------------------------------------ecCCCCeeEEEE
Q 005147 542 E-GLCKYLSFSKLRVKADLNQGDL--------------------------------------------LNSSNLVCSLSF 576 (712)
Q Consensus 542 ~-~~~~~~~~~~~~v~~dl~~~~~--------------------------------------------~~h~~~V~~i~f 576 (712)
+ ..+...+.+....+|++..+.. .+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 2 4555666655555699876332 469999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEEcCCccccCcc-cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE---
Q 005147 577 DRDGELFAAAGVNKKIKVFECDAIINENRD-IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV--- 652 (712)
Q Consensus 577 ~~~~~~lat~~~d~~I~iwD~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~--- 652 (712)
+|++++|++| .|++|++||+++....... ...+....+|...|++++|+|...++|++|+.||+|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 7999999999742110000 0000123478899999999995339999999999999999999887
Q ss_pred -EEEeccCCC------------cEEEEEEecCCCCEEEEEECCCcEEEEeCCC-CcEEEEE
Q 005147 653 -LTEMREHER------------RVWSIDFSSADPTLLASGSDDGSVKLWSINQ-AILLLHL 699 (712)
Q Consensus 653 -~~~~~~H~~------------~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~-~~~v~~~ 699 (712)
+..+.+|.. .|++++|+| ++.+|++|+. +.|++||+++ ++++..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCE
T ss_pred eeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCcccccee
Confidence 789998887 999999998 9999999999 9999999997 6665444
No 308
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.79 E-value=1.2e-17 Score=178.01 Aligned_cols=167 Identities=14% Similarity=0.116 Sum_probs=130.1
Q ss_pred CceeeccCCCccceeccc-CC--CCCCcEEEE-EcCCcEEEEEccCC-----------ceecCCCCeeEEEEcCCCCEEE
Q 005147 520 NNLGSKEGYSEGRRSGWI-NP--FLEGLCKYL-SFSKLRVKADLNQG-----------DLLNSSNLVCSLSFDRDGELFA 584 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~-~~--~~~~~~~~~-~~~~~~v~~dl~~~-----------~~~~h~~~V~~i~f~~~~~~la 584 (712)
....|+||.+.|..+.|. +. ..++.+.++ +.+....+|++..+ .+.+|...|.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 345789999999999871 11 124444444 44444455998643 2457999999999999999999
Q ss_pred EEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec---cCCC
Q 005147 585 AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR---EHER 661 (712)
Q Consensus 585 t~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~---~H~~ 661 (712)
+|+.|++|++||++++ .......+|...|.+++|+| ++.+|++|+.|++|++||+.. .....+. +|..
T Consensus 93 s~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSD 163 (343)
T ss_dssp EEETTSEEEEEETTSS-------CEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSS
T ss_pred EEcCCCcEEEEECCCC-------cEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCc
Confidence 9999999999999763 22234568999999999999 699999999999999999984 4444443 7999
Q ss_pred cEEEEEEecCCC----------CEEEEEECCCcEEEEeCCCCcEEE
Q 005147 662 RVWSIDFSSADP----------TLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 662 ~v~sv~fsp~~~----------~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
.|.+++|+| ++ .+|++|+.|++|++||.+ +....
T Consensus 164 ~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~ 207 (343)
T 2xzm_R 164 WVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRY 207 (343)
T ss_dssp CEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEE
T ss_pred eeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeE
Confidence 999999998 54 799999999999999954 44443
No 309
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.79 E-value=9.5e-19 Score=194.38 Aligned_cols=178 Identities=16% Similarity=0.133 Sum_probs=134.0
Q ss_pred CcccccccCCCCCCCCccccCCCC---CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee--cCCC
Q 005147 495 PLVRHSQLSSDGRTSKPLVNERSS---INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL--NSSN 569 (712)
Q Consensus 495 ~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~--~h~~ 569 (712)
.-|.++.|||||+.++....+... ...-.++||...++.+.| +.+|....|.. |+....... .|..
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~F---sPdg~~~~~~~------~~~~~~~~~~~~~~~ 86 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKE---FPLEFENKLDF------ELAQQNGLLNSQPVC 86 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEE---ECCCCCCTTTT------SCCCSSCSSTTSCSC
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEE---CCCCCcceEEE------EeCCCceEeecCCCC
Confidence 457899999999987554433221 111244799999999999 44551111111 222222222 5688
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCC-----CeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS-----KLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~-----~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
.|.+++|+|+|.+||+++.||.|+|||... ......|.. .|.+++||| ++++||+|+.||+|+|
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----------~l~~l~~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----------MLTNLDSKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQF 155 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTE----------EEEECCCSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCc----------eeeeccCCCccccccEEEEEEcC-CCCEEEEEcCCCEEEE
Confidence 999999999999999999999999999532 122222433 599999999 6999999999999999
Q ss_pred EECCCCc-------EEEEe----ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 645 WDVSRSQ-------VLTEM----REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 645 wD~~~~~-------~~~~~----~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
||+.++. .+.++ .+|.++|.+|+|+| ++ ++++|.|++|++||+..+..
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSS
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCcc
Confidence 9999885 36776 77889999999998 77 88899999999999988773
No 310
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.79 E-value=5.5e-19 Score=186.26 Aligned_cols=164 Identities=16% Similarity=0.201 Sum_probs=124.2
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCc------eecCCCCeeEEEEcC--CCCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGD------LLNSSNLVCSLSFDR--DGELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~------~~~h~~~V~~i~f~~--~~~~lat~~~d~~I 592 (712)
..+.||.+.|..+.| + .+|...++...++.+ +|++.++. +.+|.+.|.+++|++ ++++|+||+.|++|
T Consensus 7 ~~~~~H~~~V~~v~~-s--~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQM-D--YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp -------CCEEEEEE-C--GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred eecccccCeEEEeeE-c--CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 467899999999999 3 444444444444444 49987653 447999999999986 48999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCCc---EEEEeccCCCcEEEEEE
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRSQ---VLTEMREHERRVWSIDF 668 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~~---~~~~~~~H~~~v~sv~f 668 (712)
++||++++. ........+|...|++|+|+|.. +.+|++|+.||+|++||++.+. ....+.+|...|.+++|
T Consensus 84 ~iWd~~~~~-----~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 84 IIWREENGT-----WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp EEECCSSSC-----CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEE
T ss_pred EEEECCCCc-----ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEE
Confidence 999997521 11223345789999999999952 7899999999999999998763 24567789999999999
Q ss_pred ecCC----------------CCEEEEEECCCcEEEEeCCCC
Q 005147 669 SSAD----------------PTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 669 sp~~----------------~~~l~sgs~D~~v~lWd~~~~ 693 (712)
+|.. +.+|++||.|++|++||++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC
Confidence 9831 478999999999999999755
No 311
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.79 E-value=7.6e-18 Score=185.49 Aligned_cols=198 Identities=17% Similarity=0.296 Sum_probs=153.8
Q ss_pred CCCCCCcccccccCCCC-CCCCc---------cccCC---------CCCCceeeccCCCccceecccCCCCCCcEEEEEc
Q 005147 490 KPSGRPLVRHSQLSSDG-RTSKP---------LVNER---------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSF 550 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g-~~~~~---------~~~~~---------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~ 550 (712)
..+|...++++.|+|++ ..+++ +.... ...+...+.+|.+.+.+++| ++...+.+...+.
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW-NPNLNGYLLSASD 202 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEE-CTTSTTEEEEECT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEe-CCCCCCeEEEEeC
Confidence 34566778888888873 32221 11111 14677889999999999999 5555555555555
Q ss_pred CCcEEEEEccCCc-----------eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCC
Q 005147 551 SKLRVKADLNQGD-----------LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 618 (712)
Q Consensus 551 ~~~~v~~dl~~~~-----------~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~ 618 (712)
+....+|++..+. +.+|...|.+++|+| ++.+|++|+.|+.|++||+++... .........|..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~----~~~~~~~~~~~~ 278 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT----SKPSHTVDAHTA 278 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS----SSCSEEEECCSS
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC----CcceeEeecCCC
Confidence 5555569998621 237899999999999 678999999999999999986311 112233458899
Q ss_pred CeEEEEEcCCCCCEEEEEeCCCcEEEEECCC-CcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 619 ~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~-~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
.|++++|+|....+|++|+.||+|++||+++ ++++.++..|...|++++|+|....+|++|+.|+.|+|||++.
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 9999999996556899999999999999998 5789999999999999999994447899999999999999987
No 312
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.79 E-value=2.2e-18 Score=187.88 Aligned_cols=196 Identities=14% Similarity=0.177 Sum_probs=142.1
Q ss_pred CcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCc--
Q 005147 495 PLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGD-- 563 (712)
Q Consensus 495 ~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~-- 563 (712)
..+....|++||..+++...+. .......+.+|.+.+..+.| ++ ++...++...++.+ +|++.+++
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~~--~~~~l~s~s~d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKF-FP--SGEALISSSQDMQLKIWSVKDGSNP 174 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEE-CT--TSSEEEEEETTSEEEEEETTTCCCC
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEE-CC--CCCEEEEEeCCCeEEEEeCCCCcCc
Confidence 3444556788887654332222 12233455799999999999 33 44444444445554 49998765
Q ss_pred --eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc-----cccceEE------------ecCCCCeEEEE
Q 005147 564 --LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD-----IHYPVVE------------MASRSKLSSIC 624 (712)
Q Consensus 564 --~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~-----~~~~~~~------------~~~~~~v~~v~ 624 (712)
+.+|...|.+++|+|++.+|++|+.|++|++||+++....... ....+.. ..+...+++++
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~ 254 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE 254 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceE
Confidence 3469999999999999999999999999999999763211100 0000000 01234555566
Q ss_pred EcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec-cCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCCCCcE
Q 005147 625 WNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 625 ~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~~~~~ 695 (712)
|+| ++.+|++|+.||.|++||+++++.+..+. .|...|++++|+| ++. +|++|+.|+.|++||++++..
T Consensus 255 ~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 255 FGT-YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDG-NNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp SSC-TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTS
T ss_pred EcC-CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeC-CCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 677 58899999999999999999998877775 5889999999998 666 999999999999999998865
No 313
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.4e-18 Score=209.03 Aligned_cols=203 Identities=10% Similarity=0.049 Sum_probs=156.2
Q ss_pred CCCCCcccccccCCCCCCCCccccCCC-------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERS-------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD 563 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~ 563 (712)
.+|...+++++|+|||..+++...+.. ........+|...|..+.| ++ ...+...+.+....+|++.+++
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~f-sp--g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRF-VK--GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEE-ET--TTEEEEEETTCEEEEEETTTCS
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEE-cC--CCEEEEEECcCeEEEEECCCCc
Confidence 367778999999999997755443321 1122233468889999999 44 3345555555545559999876
Q ss_pred ee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc---ccc-eEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 564 LL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI---HYP-VVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 564 ~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~---~~~-~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
+. .|.+.|++++|+|++++|++|+.|++|++||+++........ ... ....+|...|++|+|+|.++..|++|
T Consensus 91 ~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 91 VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 54 467899999999999999999999999999997632210000 000 11246889999999999667899999
Q ss_pred eCCCcEEEEECCCCcEEEEeccC------------------CCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREH------------------ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H------------------~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
+.||+| |||+++++++.++..| ...|++|+|+| ++.+||||+.|++|++||+++++++..
T Consensus 171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 999999 9999999999998766 57899999998 899999999999999999999988753
No 314
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.78 E-value=6.4e-18 Score=177.48 Aligned_cols=171 Identities=17% Similarity=0.250 Sum_probs=133.9
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCc----e----ecCCCCeeEEEEcC--CCCEEEEEeCCC
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGD----L----LNSSNLVCSLSFDR--DGELFAAAGVNK 590 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~----~----~~h~~~V~~i~f~~--~~~~lat~~~d~ 590 (712)
..++||.+.|..+.| + .++...++...++.++ |++.++. + .+|...|.+++|+| ++++|++|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~-~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVY-D--FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CEECCCSSCEEEEEE-C--SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccCcccccceeEEEE-c--CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 467899999999999 3 3555455555556554 9998652 2 36999999999999 699999999999
Q ss_pred cEEEEEcCCccccCcc--cccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCCc----------------
Q 005147 591 KIKVFECDAIINENRD--IHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRSQ---------------- 651 (712)
Q Consensus 591 ~I~iwD~~~~~~~~~~--~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~~---------------- 651 (712)
.|++||+++....... .........|...|++++|+|.. +.+|++|+.||.|++||+++++
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999864321111 12233455789999999999932 8899999999999999987543
Q ss_pred --------------------------------------------EEEEeccCCCcEEEEEEecCCC----CEEEEEECCC
Q 005147 652 --------------------------------------------VLTEMREHERRVWSIDFSSADP----TLLASGSDDG 683 (712)
Q Consensus 652 --------------------------------------------~~~~~~~H~~~v~sv~fsp~~~----~~l~sgs~D~ 683 (712)
.+..+.+|...|++++|+| ++ .+|++|+.|+
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSEEEEEEETTS
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcceEEEEEcCCC
Confidence 2556778999999999998 66 8999999999
Q ss_pred cEEEEeCCCCcEE
Q 005147 684 SVKLWSINQAILL 696 (712)
Q Consensus 684 ~v~lWd~~~~~~v 696 (712)
.|++||++++...
T Consensus 241 ~i~iwd~~~~~~~ 253 (351)
T 3f3f_A 241 RIRIFKITEKLSP 253 (351)
T ss_dssp CEEEEEEEECC--
T ss_pred eEEEEeCCCCcCc
Confidence 9999999876544
No 315
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.78 E-value=1.6e-17 Score=174.54 Aligned_cols=194 Identities=14% Similarity=0.161 Sum_probs=155.3
Q ss_pred CCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEcc
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLN 560 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~ 560 (712)
++...+++..|+|||..+.....+. .......+.+|...+..+.| ++ ++...+....++. .+|+++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~-~~--~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI-SP--DSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEE-CT--TSSEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEE-CC--CCCEEEEEeCCCcEEEEeCC
Confidence 5677899999999998653332221 11234577899999999999 33 4444444444444 459998
Q ss_pred CCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
+++.. +|...|.+++|+|++++|++++.|+.|++||+++. .......+...+.+++|+| ++.+|+++
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 242 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--------RQLQQHDFTSQIFSLGYCP-TGEWLAVG 242 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEECT-TSSEEEEE
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--------ceEeeecCCCceEEEEECC-CCCEEEEE
Confidence 87643 58999999999999999999999999999999762 2344456788999999999 59999999
Q ss_pred eCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 637 s~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+.||.|++||++++... .+..|...|++++|+| ++.+|++++.|+.|++||+.+++.+...
T Consensus 243 ~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~ 303 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp ETTSCEEEEETTSSCEE-EECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cCCCcEEEEECCCCCeE-EEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECCCCeEEEEe
Confidence 99999999999988754 6788999999999998 9999999999999999999999887543
No 316
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.78 E-value=8.9e-18 Score=178.61 Aligned_cols=165 Identities=14% Similarity=0.155 Sum_probs=135.9
Q ss_pred eeccCCCccceecccCCC---CCCcEEEEEcCCcEEEEEccCCcee---------cCCCCeeEEEEcCC----CCEEEEE
Q 005147 523 GSKEGYSEGRRSGWINPF---LEGLCKYLSFSKLRVKADLNQGDLL---------NSSNLVCSLSFDRD----GELFAAA 586 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~dl~~~~~~---------~h~~~V~~i~f~~~----~~~lat~ 586 (712)
.+.||.+.+..+.| +|. .+..+.+...++...+|++.++... .|...|.+++|+|+ +.+|++|
T Consensus 13 ~~~~h~~~v~~i~~-~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 13 LKEDHNQPLFGVQF-NWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EECTTCSCEEEEEE-CTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred eecCCCCceEEEEE-ecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 45589999999999 543 3444555555554445998865532 25688999999998 6799999
Q ss_pred eCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe---ccCCCcE
Q 005147 587 GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM---REHERRV 663 (712)
Q Consensus 587 ~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~---~~H~~~v 663 (712)
+.|+.|++||+.+. .......+|...|++++|+|.++++|++|+.||.|++||+++++.+..+ .+|...|
T Consensus 92 ~~dg~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 92 GSRGIIRIINPITM-------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp ETTCEEEEECTTTC-------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred cCCCEEEEEEchhc-------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 99999999999752 1223345799999999999966899999999999999999999999998 7899999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
++++|+| ++.+|++|+.|+.|++||+++++.+
T Consensus 165 ~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 165 LSADYDL-LGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEESCSHHHH
T ss_pred eEEEECC-CCCEEEEecCCCCEEEEECCCCccc
Confidence 9999998 9999999999999999999987654
No 317
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.78 E-value=7.4e-18 Score=181.79 Aligned_cols=169 Identities=11% Similarity=0.135 Sum_probs=136.1
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcC-CCCEEEEEeCCCcEEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDR-DGELFAAAGVNKKIKV 594 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~-~~~~lat~~~d~~I~i 594 (712)
..+.+|.+.+..+.| ++....++...+.+....+|++.++... +|.+.|.+++|+| ++++|++|+.|+.|++
T Consensus 67 ~~~~~h~~~v~~~~~-~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 67 RTASPFDRRVTSLEW-HPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEECCCSSCEEEEEE-CSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EeccCCCCCEEEEEE-CCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 467899999999999 4433346666666655566999876532 5999999999999 7899999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
||++.. ..........+...|.+++|+| ++.+|++|+.||.|++||+ +++++.++.+|...|++++|+| ++.
T Consensus 146 wd~~~~-----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~-~~~ 217 (383)
T 3ei3_B 146 RDFSGS-----VIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP-RCD 217 (383)
T ss_dssp EETTSC-----EEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS-SCT
T ss_pred EECCCC-----ceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC-CCC
Confidence 999741 1111111123457899999999 6899999999999999999 5889999999999999999998 666
Q ss_pred -EEEEEECCCcEEEEeCCC----CcEEEEE
Q 005147 675 -LLASGSDDGSVKLWSINQ----AILLLHL 699 (712)
Q Consensus 675 -~l~sgs~D~~v~lWd~~~----~~~v~~~ 699 (712)
+|++|+.|++|++||+++ +..+..+
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 247 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEM 247 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEE
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEe
Confidence 999999999999999998 5555544
No 318
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.78 E-value=2.1e-18 Score=188.07 Aligned_cols=194 Identities=11% Similarity=0.094 Sum_probs=144.3
Q ss_pred ccccccCCCCCCCCccccCCC--------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee---
Q 005147 497 VRHSQLSSDGRTSKPLVNERS--------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL--- 565 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~--- 565 (712)
++++.|+|||..++....+.. ......+.+| .+....++++ ....+.+.+.+....+|++.++...
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 457889999987644332221 1122233344 2333333232 2334444455545555998877643
Q ss_pred -cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 566 -NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 566 -~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
+|.+.|.+++|+|++++|++|+.|++|++||+++. .......+|...|++++|+| ++.+|++|+.||+|++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-------SNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRL 207 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------CCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-------cCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEE
Confidence 68999999999999999999999999999999753 22344567999999999999 5999999999999999
Q ss_pred EECCCCcEEEEecc---CCCcEEEEEE---------------------ecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 645 WDVSRSQVLTEMRE---HERRVWSIDF---------------------SSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 645 wD~~~~~~~~~~~~---H~~~v~sv~f---------------------sp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
||+++++++..+.. |...|.+++| +| ++.+|++|+.|+.|++||++++..+..+.
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 99999999999875 4556666665 55 78899999999999999999999888776
Q ss_pred ce
Q 005147 701 DV 702 (712)
Q Consensus 701 ~~ 702 (712)
..
T Consensus 287 ~~ 288 (420)
T 3vl1_A 287 SK 288 (420)
T ss_dssp CT
T ss_pred cc
Confidence 43
No 319
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.78 E-value=1.1e-17 Score=177.83 Aligned_cols=171 Identities=15% Similarity=0.191 Sum_probs=135.0
Q ss_pred CCceeeccCCCccceecccCCCC-CCcEEEEEcCCcEE-EEEccC-Cc-----eecCCCCeeEEEEcCCCCEEEEEeCCC
Q 005147 519 INNLGSKEGYSEGRRSGWINPFL-EGLCKYLSFSKLRV-KADLNQ-GD-----LLNSSNLVCSLSFDRDGELFAAAGVNK 590 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~-~~~~~~~~~~~~~v-~~dl~~-~~-----~~~h~~~V~~i~f~~~~~~lat~~~d~ 590 (712)
.+...+++|.+.+..+.| ++.. +|...++...++.+ +|++.+ +. +.+|.+.|.+++|+|++++|++|+.|+
T Consensus 30 ~~~~~~~~h~~~v~~~~~-~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSF-SPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp CCEECSSCCSSCEEEEEE-CCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEeccCCCCceEEEEE-cCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 455678899999999999 4332 13444444444554 499986 33 346999999999999999999999999
Q ss_pred cEEEEEcCCccccCcccccceEEecCCCCeEEEEE--cCCCCCEEEEEeCCCcEEEEECCCCcEEEE-------------
Q 005147 591 KIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASSNFEGVVQVWDVSRSQVLTE------------- 655 (712)
Q Consensus 591 ~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~------------- 655 (712)
.|++||+++. .......|...|++++| +| ++.+|++|+.||.|++||+++++++..
T Consensus 109 ~v~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 179 (368)
T 3mmy_A 109 TAKMWDLSSN--------QAIQIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI 179 (368)
T ss_dssp EEEEEETTTT--------EEEEEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE
T ss_pred cEEEEEcCCC--------CceeeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec
Confidence 9999999762 23446679999999999 77 588999999999999999987643222
Q ss_pred -----------------------------------------------------------------------------ecc
Q 005147 656 -----------------------------------------------------------------------------MRE 658 (712)
Q Consensus 656 -----------------------------------------------------------------------------~~~ 658 (712)
+.+
T Consensus 180 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 180 YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 233
Q ss_pred CCC------------cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 659 HER------------RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 659 H~~------------~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|.. .|++++|+| ++.+|++|+.|+.|++||+++++++..+.
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred eecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 433 699999998 89999999999999999999998886654
No 320
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.78 E-value=6.6e-18 Score=181.18 Aligned_cols=200 Identities=14% Similarity=0.071 Sum_probs=133.7
Q ss_pred CCCCCcccccccCCCCCCCCccccCCCC----CC-ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERSS----IN-NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL 564 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~-~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~ 564 (712)
..|...++++.|||||..++....+... .+ ......+...+..+.|. +..+.+.+....+..++ ||+.+++.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRML--HRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEEC--TTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEc--CCCCEEEEEECCccEEEEEECCCCcE
Confidence 5677889999999999976443322110 00 11111222234445552 23344444444444544 88887765
Q ss_pred e---cCCCCeeEEEEcCCC-----------------------------------CEEEE--EeCCCcEEEEEcCCccccC
Q 005147 565 L---NSSNLVCSLSFDRDG-----------------------------------ELFAA--AGVNKKIKVFECDAIINEN 604 (712)
Q Consensus 565 ~---~h~~~V~~i~f~~~~-----------------------------------~~lat--~~~d~~I~iwD~~~~~~~~ 604 (712)
. .+...|.++.|+++. .++++ |+.|+.|++||+++.....
T Consensus 94 ~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~ 173 (355)
T 3vu4_A 94 VSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSAT 173 (355)
T ss_dssp EEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----
T ss_pred EEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccc
Confidence 4 367788888888653 22333 3456666666665421000
Q ss_pred c--------cccc-ceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc-EEEEECCCCcEEEEec-c-CCCcEEEEEEecCC
Q 005147 605 R--------DIHY-PVVEMASRSKLSSICWNSYIKSQIASSNFEGV-VQVWDVSRSQVLTEMR-E-HERRVWSIDFSSAD 672 (712)
Q Consensus 605 ~--------~~~~-~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~-V~lwD~~~~~~~~~~~-~-H~~~v~sv~fsp~~ 672 (712)
. .... .....+|...|++++|+| ++.+||||+.||+ |+|||+++++++.++. + |...|++++|+| +
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~-~ 251 (355)
T 3vu4_A 174 TQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWST-D 251 (355)
T ss_dssp -------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECT-T
T ss_pred cccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECC-C
Confidence 0 0000 345668999999999999 6999999999998 9999999999999998 5 999999999998 9
Q ss_pred CCEEEEEECCCcEEEEeCCCCc
Q 005147 673 PTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+.+|++||.|++|+|||++.+.
T Consensus 252 ~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 252 GSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp SCEEEEEETTCEEEEEESSCCS
T ss_pred CCEEEEEECCCEEEEEEccCCC
Confidence 9999999999999999998653
No 321
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.9e-18 Score=182.71 Aligned_cols=152 Identities=16% Similarity=0.132 Sum_probs=128.6
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCcee-----cCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEEcCCccccCccccc
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLL-----NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHY 609 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~-----~h~~~V~~i~f~~--~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~ 609 (712)
+++..|+.+.+|+.+.....|++.++.++ +|.+.|.+++|+| ++++|++|+.|++|++||+++... .
T Consensus 89 ~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~------~ 162 (343)
T 3lrv_A 89 ISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ------Y 162 (343)
T ss_dssp EEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE------E
T ss_pred EEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE------E
Confidence 56788999999998887777998877632 4568899999999 999999999999999999976321 1
Q ss_pred ceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEE-EEecc-CCCcEEEEEEecCCCCEEEEEECCCcEEE
Q 005147 610 PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL-TEMRE-HERRVWSIDFSSADPTLLASGSDDGSVKL 687 (712)
Q Consensus 610 ~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~-~~~~~-H~~~v~sv~fsp~~~~~l~sgs~D~~v~l 687 (712)
......+...|++++|+| ++.+||+|+.||.|+|||+++++.+ .++.. |..+|++++|+| ++.+|++|++| .|++
T Consensus 163 ~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~~~-~v~i 239 (343)
T 3lrv_A 163 IVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVECDQ-TVVC 239 (343)
T ss_dssp EEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEESS-BEEE
T ss_pred EEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEeCC-eEEE
Confidence 112234566799999999 6999999999999999999999887 88998 999999999998 99999999955 9999
Q ss_pred EeCCCCcEEE
Q 005147 688 WSINQAILLL 697 (712)
Q Consensus 688 Wd~~~~~~v~ 697 (712)
||+++++.+.
T Consensus 240 wd~~~~~~~~ 249 (343)
T 3lrv_A 240 FDLRKDVGTL 249 (343)
T ss_dssp EETTSSTTCB
T ss_pred EEcCCCCcce
Confidence 9999987653
No 322
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.77 E-value=4.6e-18 Score=204.51 Aligned_cols=172 Identities=19% Similarity=0.179 Sum_probs=128.4
Q ss_pred eeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee---------------cCCCCeeEEEEcCCCCEEEEE
Q 005147 523 GSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL---------------NSSNLVCSLSFDRDGELFAAA 586 (712)
Q Consensus 523 ~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~---------------~h~~~V~~i~f~~~~~~lat~ 586 (712)
.++||...+..+.| +.++.+.++...++.|+ ||+.++.+. +|...|.+|+|+|++++||+|
T Consensus 430 ~l~G~~~~v~sv~~---spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsg 506 (902)
T 2oaj_A 430 LLKGGVRTKRQKLP---AEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVS 506 (902)
T ss_dssp SCCCSBCCCCCCCC---CSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEE
T ss_pred cccCCcCCCCcccc---cccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEE
Confidence 45666666555555 33444444444444444 776655321 688999999999999999999
Q ss_pred eCCCcEEEEEcCCccccC----------------------cc----------------cccceEEecCCCCeEEEEEcCC
Q 005147 587 GVNKKIKVFECDAIINEN----------------------RD----------------IHYPVVEMASRSKLSSICWNSY 628 (712)
Q Consensus 587 ~~d~~I~iwD~~~~~~~~----------------------~~----------------~~~~~~~~~~~~~v~~v~~~p~ 628 (712)
+.|++|+|||+.+..... .. ..+.....+|...|++|+|+|
T Consensus 507 s~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp- 585 (902)
T 2oaj_A 507 IETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN- 585 (902)
T ss_dssp ETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-
T ss_pred ecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-
Confidence 999999999997642100 00 011233456999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEE-----Eec-cCCCcEEEEEEe-----cCCC---CEEEEEECCCcEEEEeC---C
Q 005147 629 IKSQIASSNFEGVVQVWDVSRSQVLT-----EMR-EHERRVWSIDFS-----SADP---TLLASGSDDGSVKLWSI---N 691 (712)
Q Consensus 629 ~~~~lasgs~Dg~V~lwD~~~~~~~~-----~~~-~H~~~v~sv~fs-----p~~~---~~l~sgs~D~~v~lWd~---~ 691 (712)
++ +||+|+.|++|+|||++++..+. .+. +|+..|++|+|+ | |+ .+|++||.|++|++||+ .
T Consensus 586 dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~-Dg~~~~~l~sgs~D~tv~~wd~~p~~ 663 (902)
T 2oaj_A 586 IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGD-DGYSSILMVCGTDMGEVITYKILPAS 663 (902)
T ss_dssp TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTT-SSSEEEEEEEEETTSEEEEEEEEECG
T ss_pred Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCC-CCCcceEEEEEecCCcEEEEEEecCC
Confidence 58 99999999999999998887664 233 899999999999 8 64 89999999999999999 7
Q ss_pred CCcEEEEEe
Q 005147 692 QAILLLHLV 700 (712)
Q Consensus 692 ~~~~v~~~~ 700 (712)
+|+.+.++.
T Consensus 664 ~g~~~~~~~ 672 (902)
T 2oaj_A 664 GGKFDVQLM 672 (902)
T ss_dssp GGCEEEEEE
T ss_pred CCcEEEEec
Confidence 888776543
No 323
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.77 E-value=1.5e-17 Score=194.76 Aligned_cols=168 Identities=16% Similarity=0.160 Sum_probs=136.4
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC---------ceecCCCCeeEEEEcCCCCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG---------DLLNSSNLVCSLSFDRDGELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~---------~~~~h~~~V~~i~f~~~~~~lat~~~d~~I 592 (712)
-.++||.+.|..+.| ++....++...+.+....+|++... .+.+|...|.+++|+|++++|+||+.|++|
T Consensus 376 ~~l~~H~~~V~~v~~-~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 376 GTMRAHTDMVTAIAT-PIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEECCSSCEEEEEC-CTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhcccCCceeEEEEe-cCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 358899999999999 4444445555555555555998653 245799999999999999999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe---ccCCCcEEEEEEe
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM---REHERRVWSIDFS 669 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~---~~H~~~v~sv~fs 669 (712)
+|||+.++ .......+|...|.+++|+| ++++|+||+.|++|+|||+......... .+|...|++++|+
T Consensus 455 ~vwd~~~~-------~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 455 RLWDLAAG-------VSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EEEETTTT-------EEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred EEEECCCC-------cceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 99999763 22344568999999999999 6899999999999999998765443332 4699999999999
Q ss_pred cCCC--CEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 670 SADP--TLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 670 p~~~--~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
| ++ ..|++||.|++|++||+++++.+..+
T Consensus 527 ~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 557 (694)
T 3dm0_A 527 P-NTLQPTIVSASWDKTVKVWNLSNCKLRSTL 557 (694)
T ss_dssp S-CSSSCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred C-CCCcceEEEEeCCCeEEEEECCCCcEEEEE
Confidence 8 54 68999999999999999988876554
No 324
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.77 E-value=8.2e-18 Score=183.05 Aligned_cols=165 Identities=17% Similarity=0.190 Sum_probs=137.5
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCc-----------eecCCCCeeEEEEcCCC-CEEEEEeC
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD-----------LLNSSNLVCSLSFDRDG-ELFAAAGV 588 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~-----------~~~h~~~V~~i~f~~~~-~~lat~~~ 588 (712)
...+.||.+.+..+.| +++...++...+.+....+|++.++. +.+|...|.+++|+|++ .+|++|+.
T Consensus 74 ~~~~~~h~~~V~~~~~-~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAW-CPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CCCBCCCSSCEEEEEE-CTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CceEecCCCCEEEEEe-CCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 3467899999999999 55455555555555444559998762 34699999999999998 69999999
Q ss_pred CCcEEEEEcCCccccCcccccceEE--ecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-ccCCCc-EE
Q 005147 589 NKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-REHERR-VW 664 (712)
Q Consensus 589 d~~I~iwD~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-~~H~~~-v~ 664 (712)
|+.|++||+++. ...... ..|...|++++|+| ++++|++|+.||.|++||+++++.+.++ ..|.+. +.
T Consensus 153 dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 153 DNVILVWDVGTG-------AAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPV 224 (402)
T ss_dssp TSCEEEEETTTT-------EEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCC
T ss_pred CCEEEEEECCCC-------CccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcce
Confidence 999999999762 112223 46899999999999 6999999999999999999999999999 788876 99
Q ss_pred EEEEecCCCCEEEEE---ECCCcEEEEeCCCCcE
Q 005147 665 SIDFSSADPTLLASG---SDDGSVKLWSINQAIL 695 (712)
Q Consensus 665 sv~fsp~~~~~l~sg---s~D~~v~lWd~~~~~~ 695 (712)
++.|+| ++.+|++| +.|+.|++||++++..
T Consensus 225 ~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 225 HAVFVS-EGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp EEEECS-TTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred EEEEcC-CCcEEEEeccCCCCceEEEEcCccccC
Confidence 999998 89999999 7999999999998765
No 325
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.77 E-value=7.5e-18 Score=182.09 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=154.0
Q ss_pred CCCCCcccccccCCC----C---CCCCccccCCC--------CCC-----ceeeccC-----CCccceecccCCC--CCC
Q 005147 491 PSGRPLVRHSQLSSD----G---RTSKPLVNERS--------SIN-----NLGSKEG-----YSEGRRSGWINPF--LEG 543 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~----g---~~~~~~~~~~~--------~~~-----~~~l~gh-----~~~~~~~~~~~~~--~~~ 543 (712)
.+|...++++.|+++ | ..++....+.. ... ...+.+| ...+..+.| ++. .++
T Consensus 59 ~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~ 137 (397)
T 1sq9_A 59 FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW-GASNDRLL 137 (397)
T ss_dssp ECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEE-ECCC----
T ss_pred ecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEE-eeccCCCC
Confidence 367778899999999 8 65433222211 112 5677888 588999999 311 344
Q ss_pred cE--EEEEcCCcEEEEEccC------Ccee----------------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 005147 544 LC--KYLSFSKLRVKADLNQ------GDLL----------------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA 599 (712)
Q Consensus 544 ~~--~~~~~~~~~v~~dl~~------~~~~----------------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~ 599 (712)
.. .+.+.+....+|++.. +... .|...|.+++|+|++ +|++|+.|+.|++||+++
T Consensus 138 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 216 (397)
T 1sq9_A 138 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST 216 (397)
T ss_dssp CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT
T ss_pred ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC
Confidence 43 4444444444599987 4322 278999999999999 999999999999999975
Q ss_pred ccccCcccccceEEec---C---CCCeEEEEEcCCCCCEEEEEeCC---CcEEEEECCCCcEEEEecc------------
Q 005147 600 IINENRDIHYPVVEMA---S---RSKLSSICWNSYIKSQIASSNFE---GVVQVWDVSRSQVLTEMRE------------ 658 (712)
Q Consensus 600 ~~~~~~~~~~~~~~~~---~---~~~v~~v~~~p~~~~~lasgs~D---g~V~lwD~~~~~~~~~~~~------------ 658 (712)
. ........ | ...|.+++|+| ++.+|++|+.| |.|++||+++++++..+.+
T Consensus 217 ~-------~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 1sq9_A 217 L-------RPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEF 288 (397)
T ss_dssp T-------EEEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCB
T ss_pred C-------ceeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccc
Confidence 2 12223334 7 89999999999 59999999999 9999999999999999999
Q ss_pred -CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 659 -HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 659 -H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|...|++++|+| ++.+|++|+.|+.|++||+++++.+..+.
T Consensus 289 ~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 289 AHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp SBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 999999999998 89999999999999999999999887776
No 326
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.77 E-value=2.6e-18 Score=184.68 Aligned_cols=198 Identities=14% Similarity=0.130 Sum_probs=148.2
Q ss_pred CCCCCCCcccccccCCCCCCCCccccCCC-----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEE
Q 005147 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERS-----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKA 557 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 557 (712)
.+.+|...++++.|+|||..++....+.. ..+...+.+|...+..+.| ++ ....+.+.+.+....+|
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~-~~~~l~~~~~d~~i~iw 127 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW-SP-NEDKFAVGSGARVISVC 127 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC-CT-TSSCCEEEESSSCEEEC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE-CC-CCCEEEEEecCCeEEEE
Confidence 45678888999999999987644332221 2356788899999999999 44 22344444555445559
Q ss_pred EccCCc-------eec-CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc----------ccccceEEecCCCC
Q 005147 558 DLNQGD-------LLN-SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR----------DIHYPVVEMASRSK 619 (712)
Q Consensus 558 dl~~~~-------~~~-h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~----------~~~~~~~~~~~~~~ 619 (712)
++..+. +.+ |...|.+++|+|++++|++|+.|++|++||+++...... ....++....|...
T Consensus 128 d~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (377)
T 3dwl_C 128 YFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGW 207 (377)
T ss_dssp CC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSS
T ss_pred EECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCce
Confidence 988654 224 899999999999999999999999999999964211110 00112333388999
Q ss_pred eEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcE----EEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~----~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
|++++|+| ++.+|++|+.||+|+|||+++++. +.++.+|..+|++++|+| ++.+|++|++|+.+ +|+..
T Consensus 208 v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 208 VHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEEEEECT-TSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECCC
T ss_pred EEEEEECC-CCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEeC
Confidence 99999999 689999999999999999999987 888999999999999998 89999999877766 66554
No 327
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.77 E-value=4.5e-18 Score=191.97 Aligned_cols=169 Identities=10% Similarity=0.093 Sum_probs=135.5
Q ss_pred eeeccCCCccceecccCCC----C-CCcEEEEEcCCcEEEEEccCC---------------ceecCCCCeeEEEEcCCCC
Q 005147 522 LGSKEGYSEGRRSGWINPF----L-EGLCKYLSFSKLRVKADLNQG---------------DLLNSSNLVCSLSFDRDGE 581 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~----~-~~~~~~~~~~~~~v~~dl~~~---------------~~~~h~~~V~~i~f~~~~~ 581 (712)
..+.+|.+.+..+.| ++. . .++++..+.+....+|++..+ .+.+|...|++++|+++ .
T Consensus 201 ~~l~~~~~~V~~v~w-sp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~ 278 (524)
T 2j04_B 201 QTIVHSFGEVWDLKW-HEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-T 278 (524)
T ss_dssp EEEEECCCSEEEEEE-CSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-S
T ss_pred EEEEecCCcEEEEEE-CCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-C
Confidence 346788999999999 553 1 246666666655556999755 23468899999999986 4
Q ss_pred EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEE--EEcCCCC-CEEEEEeCCCcEEEEECCCCcEEEEecc
Q 005147 582 LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI--CWNSYIK-SQIASSNFEGVVQVWDVSRSQVLTEMRE 658 (712)
Q Consensus 582 ~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v--~~~p~~~-~~lasgs~Dg~V~lwD~~~~~~~~~~~~ 658 (712)
.||+|+.|++|++||+++.. .......+|...|++| +|+| ++ .+||||+.||+|+|||+++++++.++.+
T Consensus 279 ~lasgs~DgtV~lWD~~~~~------~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~ 351 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPE------VPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVS 351 (524)
T ss_dssp EEEEEETTSEEEEEETTBCS------SCSEEEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEE
T ss_pred eEEEEeCCCEEEEEECCCCC------CceEEeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCccccccc
Confidence 89999999999999997521 1123456899999999 4566 56 8999999999999999999988888888
Q ss_pred CCC--cEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 659 HER--RVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 659 H~~--~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|.. .|++|+|+| ++..+++|+.|++|++||++++.++.++.
T Consensus 352 ~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 352 RFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp ECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred ccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeee
Confidence 864 589999998 88999999999999999999988766543
No 328
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.1e-17 Score=178.85 Aligned_cols=168 Identities=14% Similarity=0.152 Sum_probs=134.7
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEE-cCCcEEEEEccC--Cc----eecCCCCeeEEEEcCC--CCEEEEEeCCCc
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLS-FSKLRVKADLNQ--GD----LLNSSNLVCSLSFDRD--GELFAAAGVNKK 591 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~dl~~--~~----~~~h~~~V~~i~f~~~--~~~lat~~~d~~ 591 (712)
...++||.+.+..+.| + .++...+.. .+....+|++.. +. +.+|.+.|.+++|+++ +++|++|+.|+.
T Consensus 4 ~~~~~~h~~~v~~~~~-s--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 4 VVIANAHNELIHDAVL-D--YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp -CCEEECCCCEEEEEE-C--SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEE-c--CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 4578999999999999 3 445444444 444445599873 32 3369999999999987 899999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCcEEEEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRS--QVLTEMREHERRVWSIDF 668 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~--~~~~~~~~H~~~v~sv~f 668 (712)
|++||+.+.. .........|...|.+++|+|.. +.+|++++.||.|++||++++ .....+.+|...|++++|
T Consensus 81 v~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 81 VLIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp EEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred EEEEEcCCCc-----eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 9999997521 11234455689999999999932 789999999999999999987 345567889999999999
Q ss_pred ecC------------CCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 669 SSA------------DPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 669 sp~------------~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+|. ++.+|++|+.|+.|++||++++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 195 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc
Confidence 985 6899999999999999999877643
No 329
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.77 E-value=2.4e-17 Score=178.02 Aligned_cols=207 Identities=14% Similarity=0.124 Sum_probs=146.0
Q ss_pred CCCCCcccccccCC-CCCCCCccccCCC-------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEccC
Q 005147 491 PSGRPLVRHSQLSS-DGRTSKPLVNERS-------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLNQ 561 (712)
Q Consensus 491 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~-------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~~ 561 (712)
.+|...++++.|+| ++..++....+.. ....+....+...+..+.|.....++.+.+....++. .+|++.+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 45778899999999 5444333222221 1112233346677778888433334444444444444 4599987
Q ss_pred Cce----ecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcc---------cccceEEecCCCCeEEEEEcC
Q 005147 562 GDL----LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRD---------IHYPVVEMASRSKLSSICWNS 627 (712)
Q Consensus 562 ~~~----~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~---------~~~~~~~~~~~~~v~~v~~~p 627 (712)
+.. .+|.+.|.+++|+|++. +|++|+.|+.|++||+++....... .........|...|++++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 763 36899999999999988 6999999999999999763210000 000111246889999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCC-----------------------------------------------cEEEEeccCC
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRS-----------------------------------------------QVLTEMREHE 660 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~-----------------------------------------------~~~~~~~~H~ 660 (712)
++.+|++++.||.|++||++++ +++..+.+|.
T Consensus 256 -~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~ 334 (408)
T 4a11_B 256 -DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHY 334 (408)
T ss_dssp -TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCS
T ss_pred -CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCC
Confidence 6999999999999999998753 4567788899
Q ss_pred CcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 661 RRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 661 ~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
..|++++|+| ++.+|++|+.||.|++||+++++.+...
T Consensus 335 ~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 335 KTVDCCVFQS-NFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEEECC-------
T ss_pred CeEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 9999999998 8999999999999999999998877543
No 330
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.77 E-value=9.7e-18 Score=182.21 Aligned_cols=200 Identities=13% Similarity=0.140 Sum_probs=152.4
Q ss_pred CCCCCCCcccccccCCC-CCCCCccccC---------CCC------CC--ceeeccCCCccceecccCCCCCCcEEEEEc
Q 005147 489 VKPSGRPLVRHSQLSSD-GRTSKPLVNE---------RSS------IN--NLGSKEGYSEGRRSGWINPFLEGLCKYLSF 550 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~-g~~~~~~~~~---------~~~------~~--~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~ 550 (712)
.+.+|...+++..|+|+ |..++....+ ... .+ ...+.+|...+..+.| ++....++...+.
T Consensus 108 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~ 186 (416)
T 2pm9_A 108 RFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW-NQSLAHVFASAGS 186 (416)
T ss_dssp ECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE-CSSCTTEEEEESS
T ss_pred hccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe-CCCCCcEEEEEcC
Confidence 35678888999999998 5543222211 111 11 1234789999999999 4432334444444
Q ss_pred CCcEEEEEccCCcee----cC------CCCeeEEEEcCCC-CEEEEEeCCC---cEEEEEcCCccccCcccccceEEe-c
Q 005147 551 SKLRVKADLNQGDLL----NS------SNLVCSLSFDRDG-ELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEM-A 615 (712)
Q Consensus 551 ~~~~v~~dl~~~~~~----~h------~~~V~~i~f~~~~-~~lat~~~d~---~I~iwD~~~~~~~~~~~~~~~~~~-~ 615 (712)
+....+|++++++.. .| ...|.+++|+|++ .+|++++.|+ .|++||+++... ...... +
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~------~~~~~~~~ 260 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT------PLQTLNQG 260 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS------CSBCCCSC
T ss_pred CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC------CcEEeecC
Confidence 444445999877643 23 7889999999987 6999999999 999999976311 111223 6
Q ss_pred CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCC-CEEEEEECCCcEEEEeCCCCc
Q 005147 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP-TLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 616 ~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~-~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|...|++++|+|.++.+|++|+.||+|++||+++++++.++.+|...|++++|+| ++ .+|++|+.|+.|++||+.++.
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAP-EAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECT-TCTTEEEECCSSSEEEEEESCCCC
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECC-CCCCEEEEEecCCcEEEEEccCCC
Confidence 8899999999996799999999999999999999999999999999999999998 66 899999999999999998876
Q ss_pred EE
Q 005147 695 LL 696 (712)
Q Consensus 695 ~v 696 (712)
..
T Consensus 340 ~~ 341 (416)
T 2pm9_A 340 NT 341 (416)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 331
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.77 E-value=1.3e-17 Score=176.92 Aligned_cols=202 Identities=17% Similarity=0.169 Sum_probs=145.5
Q ss_pred CCCCCCccccc------ccCCCCCCCCccccC---------CCCCCceeeccCCC----ccceecccC-CCCCCcEEEEE
Q 005147 490 KPSGRPLVRHS------QLSSDGRTSKPLVNE---------RSSINNLGSKEGYS----EGRRSGWIN-PFLEGLCKYLS 549 (712)
Q Consensus 490 ~~~~~~~~~~~------~~~~~g~~~~~~~~~---------~~~~~~~~l~gh~~----~~~~~~~~~-~~~~~~~~~~~ 549 (712)
+.+|...+++. .|++||..++....+ ....+...+..|.+ .+..+.|-. -..++...+..
T Consensus 107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 186 (357)
T 3i2n_A 107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG 186 (357)
T ss_dssp ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE
T ss_pred EEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE
Confidence 44677777777 678888765333222 22225556666555 565666311 02355555555
Q ss_pred cCCcEEE-EEccCCcee---cCCCCeeEEEEcC---CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEE
Q 005147 550 FSKLRVK-ADLNQGDLL---NSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 622 (712)
Q Consensus 550 ~~~~~v~-~dl~~~~~~---~h~~~V~~i~f~~---~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~ 622 (712)
..++.+. |+++++... .|...|.+++|+| ++++|++|+.|+.|++||+++...... .......+|...|++
T Consensus 187 ~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~~~~~v~~ 264 (357)
T 3i2n_A 187 YDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG--FASVSEKAHKSTVWQ 264 (357)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE--EEEEEEECCSSCEEE
T ss_pred ccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc--eeeeccCCCcCCEEE
Confidence 5555555 999987754 5899999999999 999999999999999999976321110 111123479999999
Q ss_pred EEEcCCCCC-EEEEEeCCCcEEEEECCCC-------------------cEEEEeccCCCcEEEEEEecCCCCEEE-EEEC
Q 005147 623 ICWNSYIKS-QIASSNFEGVVQVWDVSRS-------------------QVLTEMREHERRVWSIDFSSADPTLLA-SGSD 681 (712)
Q Consensus 623 v~~~p~~~~-~lasgs~Dg~V~lwD~~~~-------------------~~~~~~~~H~~~v~sv~fsp~~~~~l~-sgs~ 681 (712)
++|+|. +. +|++|+.||.|++||++++ +++.++.+|...|++++|+| ++.+|+ +|+.
T Consensus 265 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~s~~~ 342 (357)
T 3i2n_A 265 VRHLPQ-NRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP-DKRGLCVCSSF 342 (357)
T ss_dssp EEEETT-EEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS-SSTTEEEEEET
T ss_pred EEECCC-CCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcC-CCCeEEEEecC
Confidence 999995 55 8999999999999999854 46888999999999999998 787777 8999
Q ss_pred CCcEEEEeCCCCcE
Q 005147 682 DGSVKLWSINQAIL 695 (712)
Q Consensus 682 D~~v~lWd~~~~~~ 695 (712)
|+.|++||+.+...
T Consensus 343 d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 343 DQTVRVLIVTKLNK 356 (357)
T ss_dssp TSEEEEEEECC---
T ss_pred CCcEEEEECCCccc
Confidence 99999999987654
No 332
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.76 E-value=2.4e-17 Score=178.90 Aligned_cols=190 Identities=14% Similarity=0.211 Sum_probs=146.9
Q ss_pred CCCCcccccccCCCCCCCCccccC-------CCCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEEEEccCCc
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNE-------RSSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQGD 563 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~~~ 563 (712)
++...+++..|+|||..++....+ ........+.+|...+..+.| ++ ++. +.+.+.+....+|++.++.
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~-~~--~~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKW-NK--DGTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEE-CT--TSSEEEEEETTCCEEEEETTTTE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEE-CC--CCCEEEEEecCCeEEEEECCCCc
Confidence 356689999999999865333222 223445677899999999999 33 222 2222222222225443322
Q ss_pred ------------------------------------------------------------eecCCCCeeEEEEcCCCCEE
Q 005147 564 ------------------------------------------------------------LLNSSNLVCSLSFDRDGELF 583 (712)
Q Consensus 564 ------------------------------------------------------------~~~h~~~V~~i~f~~~~~~l 583 (712)
+.+|...|.+++|+|++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 22578899999999999999
Q ss_pred EEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcE
Q 005147 584 AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRV 663 (712)
Q Consensus 584 at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v 663 (712)
++++.|+.|++||+++. ........|...|.+++|+|. + +|++++.||.|++||+++++++..+..|...|
T Consensus 263 ~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 333 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNG-------NSQNCFYGHSQSIVSASWVGD-D-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI 333 (425)
T ss_dssp EEEETTSCEEEECSSSB-------SCSEEECCCSSCEEEEEEETT-T-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE
T ss_pred EEEcCCCEEEEEECCCC-------ccceEecCCCccEEEEEECCC-C-EEEEEeCCCcEEEEECCCCcEeEecccCCccE
Confidence 99999999999999752 223344568899999999994 5 99999999999999999999999999999999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
++++|+| ++.+|++|+.|+.|++||++++.
T Consensus 334 ~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 334 FAGRISQ-DGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEECHHHH
T ss_pred EEEEEcC-CCCEEEEEECCCeEEEEECCCCc
Confidence 9999998 89999999999999999999877
No 333
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.76 E-value=1.3e-17 Score=178.04 Aligned_cols=197 Identities=15% Similarity=0.125 Sum_probs=151.6
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEE
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKAD 558 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~d 558 (712)
+.+|...+++..|++||..++....+. ...+...+.+|...+..+.| + .++ .+.+.+.+....+|+
T Consensus 48 ~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~--~~~~~l~~~~~d~~v~i~d 124 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW-A--PNEKKFAVGSGSRVISICY 124 (372)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE-C--TTSSEEEEEETTSSEEEEE
T ss_pred ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEE-C--CCCCEEEEEeCCCEEEEEE
Confidence 346777899999999998664333222 12334566889999999999 3 344 444444444445599
Q ss_pred ccCCce--------ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc-----------CcccccceEEecCCCC
Q 005147 559 LNQGDL--------LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE-----------NRDIHYPVVEMASRSK 619 (712)
Q Consensus 559 l~~~~~--------~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~-----------~~~~~~~~~~~~~~~~ 619 (712)
+..+.. .+|...|.+++|+|++++|++|+.|+.|++||++..... ............|...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (372)
T 1k8k_C 125 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW 204 (372)
T ss_dssp EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC
T ss_pred ecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe
Confidence 887541 257899999999999999999999999999997531110 0011122233378899
Q ss_pred eEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
|++++|+| ++.+|++++.||.|++||+++++++..+..|..+|++++|+| ++.++++| .|+.|++||+++
T Consensus 205 v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 205 VHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEEECC-CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccC
Confidence 99999999 589999999999999999999999999999999999999998 88888887 899999999988
No 334
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.76 E-value=9.6e-18 Score=184.67 Aligned_cols=178 Identities=17% Similarity=0.221 Sum_probs=138.5
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC----------Cc----eecCCCCeeEEEEcCCCC-EEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ----------GD----LLNSSNLVCSLSFDRDGE-LFAA 585 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~----------~~----~~~h~~~V~~i~f~~~~~-~lat 585 (712)
...+.+|.+.+..+.| ++....++.+++.+....+|++.. .. +.+|...|++++|+|++. +|++
T Consensus 121 ~~~~~~h~~~v~~l~~-~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 121 IEIKINHEGEVNRARY-MPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEEESSCCSEEEE-ETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEEcCCCcEEEEEE-CCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 3567799999999999 443233444444444444599875 22 347899999999999988 9999
Q ss_pred EeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCc
Q 005147 586 AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERR 662 (712)
Q Consensus 586 ~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~---~~~~~~~~H~~~ 662 (712)
|+.|++|++||+.+................|...|.+++|+|.++.+|++++.||.|++||++++ +++..+..|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 99999999999986322222222234455899999999999977899999999999999999987 678888899999
Q ss_pred EEEEEEecCCCCEEEEEECCCcEEEEeCCCC-cEEEEE
Q 005147 663 VWSIDFSSADPTLLASGSDDGSVKLWSINQA-ILLLHL 699 (712)
Q Consensus 663 v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~-~~v~~~ 699 (712)
|++++|+|....++++|+.|++|++||+++. .++..+
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 317 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe
Confidence 9999999844458999999999999999984 444433
No 335
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.76 E-value=6.5e-18 Score=179.60 Aligned_cols=200 Identities=12% Similarity=0.096 Sum_probs=150.3
Q ss_pred CCCCCCCcccccccCCC---CCCCCccccC---------C-CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-
Q 005147 489 VKPSGRPLVRHSQLSSD---GRTSKPLVNE---------R-SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR- 554 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~~---g~~~~~~~~~---------~-~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~- 554 (712)
.+.+|...++++.|+|+ |..++....+ . .......+.+|.+.+..+.| ++ ++...++...++.
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~-~~--~~~~l~s~~~dg~v 110 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCW-SD--DGSKVFTASCDKTA 110 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEE-CT--TSSEEEEEETTSEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEE-Cc--CCCEEEEEcCCCcE
Confidence 45678889999999999 4654333222 2 11222578899999999999 33 5544444444455
Q ss_pred EEEEccCCcee---cCCCCeeEEEE--cCCCCEEEEEeCCCcEEEEEcCCccccCccc----------------------
Q 005147 555 VKADLNQGDLL---NSSNLVCSLSF--DRDGELFAAAGVNKKIKVFECDAIINENRDI---------------------- 607 (712)
Q Consensus 555 v~~dl~~~~~~---~h~~~V~~i~f--~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~---------------------- 607 (712)
.+|++.++... +|...|.+++| +|++.+|++|+.|+.|++||+++........
T Consensus 111 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (368)
T 3mmy_A 111 KMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190 (368)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGG
T ss_pred EEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCC
Confidence 44999987644 69999999999 8899999999999999999997632100000
Q ss_pred -------------------------------------------------------------ccceEEecCCC--------
Q 005147 608 -------------------------------------------------------------HYPVVEMASRS-------- 618 (712)
Q Consensus 608 -------------------------------------------------------------~~~~~~~~~~~-------- 618 (712)
........|..
T Consensus 191 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (368)
T 3mmy_A 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 270 (368)
T ss_dssp CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCC
T ss_pred cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccccc
Confidence 00011122322
Q ss_pred ----CeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 619 ----KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 619 ----~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.|++++|+| ++.+|++|+.||.|+|||+++++++.++.+|..+|++++|+| ++.+|++||.|+..+.|++-..
T Consensus 271 ~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 271 QDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp EEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECT-TSSCEEEEECCCSTTCGGGCCT
T ss_pred ccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECC-CCCeEEEEecccccccccccCC
Confidence 699999999 689999999999999999999999999999999999999998 9999999999987766665433
No 336
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.75 E-value=3.2e-17 Score=178.56 Aligned_cols=193 Identities=16% Similarity=0.247 Sum_probs=152.2
Q ss_pred CCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC-c
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-D 563 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~-~ 563 (712)
+...++++.|+|||..+++...+. .......+.+|.+.+..+.| + ...+...+.+....+|+++.. .
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~---~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW-N---RHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-E---TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE-C---CCEEEEEcCCCCEEEEecccCcc
Confidence 667799999999998664432221 12345677899999999999 3 234444444444445999843 2
Q ss_pred ----eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe--
Q 005147 564 ----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 637 (712)
Q Consensus 564 ----~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-- 637 (712)
+.+|.+.|.+++|+|++.+|++|+.|+.|++||+++. ........|...|.+++|+|....++++|+
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 209 QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS-------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS-------SEEEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC-------CccEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 4479999999999999999999999999999999752 222344578999999999997678888876
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE--CCCcEEEEeCCCCcEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS--DDGSVKLWSINQAILLLH 698 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs--~D~~v~lWd~~~~~~v~~ 698 (712)
.||.|++||+++++++..+. |...|++++|+| ++.++++++ .|+.|++||+.++.....
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVD-AGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEE-CSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEe-CCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeE
Confidence 89999999999999999886 678899999998 899999854 899999999998766544
No 337
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.75 E-value=3.5e-17 Score=176.76 Aligned_cols=157 Identities=20% Similarity=0.216 Sum_probs=129.7
Q ss_pred ccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----c---C---CCCeeEEEEcCCCCEEEEEeCC---C
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL----N---S---SNLVCSLSFDRDGELFAAAGVN---K 590 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~----~---h---~~~V~~i~f~~~~~~lat~~~d---~ 590 (712)
..|...+..+.| ..++ ..+....++.+. |+++++... . | ...|.+++|+|++.+|++++.| +
T Consensus 183 ~~~~~~i~~~~~---~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 183 MTPSQFATSVDI---SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFG 258 (397)
T ss_dssp SSSCCCCCEEEE---CTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEE
T ss_pred cCCCCCceEEEE---CCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCc
Confidence 448888899999 3455 455555555554 999876643 5 7 8999999999999999999999 9
Q ss_pred cEEEEEcCCccccCcccccceEEec-------------CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 005147 591 KIKVFECDAIINENRDIHYPVVEMA-------------SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR 657 (712)
Q Consensus 591 ~I~iwD~~~~~~~~~~~~~~~~~~~-------------~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~ 657 (712)
.|++||+++.. ....... |...|.+++|+| ++.+|++|+.||.|+|||+++++++.++.
T Consensus 259 ~i~i~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 259 CITLYETEFGE-------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEEEETTTCC-------EEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCCc-------ccceeccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 99999997631 1222333 889999999999 68999999999999999999999999999
Q ss_pred ------cC---------------CCcEEEEEEecCCC----------CEEEEEECCCcEEEEeCCCCc
Q 005147 658 ------EH---------------ERRVWSIDFSSADP----------TLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 658 ------~H---------------~~~v~sv~fsp~~~----------~~l~sgs~D~~v~lWd~~~~~ 694 (712)
+| ...|++++|+| ++ .+|++|+.|+.|++||+++|+
T Consensus 331 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 331 MHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK-KGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC-TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccCcccchhhhhccccccccccCCceeEEEecc-ccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 88 99999999998 76 799999999999999998764
No 338
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.9e-17 Score=181.87 Aligned_cols=199 Identities=10% Similarity=0.145 Sum_probs=150.7
Q ss_pred CCCCCcccccccCC-CCCCCCccccCCC------------CCCceeec-cCCCccceecccCCCCCCcEEEEEcCCcEE-
Q 005147 491 PSGRPLVRHSQLSS-DGRTSKPLVNERS------------SINNLGSK-EGYSEGRRSGWINPFLEGLCKYLSFSKLRV- 555 (712)
Q Consensus 491 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~------------~~~~~~l~-gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 555 (712)
.+|...++++.|+| ||..++....+.. ......+. +|.+.+..+.| + .++...+....++.+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~-~--~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITM-I--PNFDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEE-C--TTSSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEE-e--CCCCEEEEEeCCCEEE
Confidence 56788999999999 9986644432221 11111222 69999999999 3 344444444444554
Q ss_pred EEEcc---CCceec----------------CCCCeeEEE--EcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe
Q 005147 556 KADLN---QGDLLN----------------SSNLVCSLS--FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (712)
Q Consensus 556 ~~dl~---~~~~~~----------------h~~~V~~i~--f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~ 614 (712)
+|++. .+.... +...+.++. +++++.+|++|+.|+.|++||+++.. ......
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~ 209 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE-------RLQIIE 209 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC-------EEEEEE
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe-------eeEEEc
Confidence 49884 333221 566777777 56789999999999999999997621 122233
Q ss_pred c--CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec-cCCCcEEEEEEecC---CCCEEEEEECCCcEEEE
Q 005147 615 A--SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSA---DPTLLASGSDDGSVKLW 688 (712)
Q Consensus 615 ~--~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-~H~~~v~sv~fsp~---~~~~l~sgs~D~~v~lW 688 (712)
. |...|++++|+| ++.+|++|+.||+|++||+++++++.++. .|..+|++++|+|. ++.+|++|+.|++|++|
T Consensus 210 ~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 210 NSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp CCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred cCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 3 789999999999 59999999999999999999999999986 78899999977762 57799999999999999
Q ss_pred eCCCCcEEEEEe
Q 005147 689 SINQAILLLHLV 700 (712)
Q Consensus 689 d~~~~~~v~~~~ 700 (712)
|+++++++..+.
T Consensus 289 d~~~~~~~~~~~ 300 (437)
T 3gre_A 289 NFVKGHCQYAFI 300 (437)
T ss_dssp ETTTTEEEEEEE
T ss_pred EcCCCcEEEEEE
Confidence 999999887765
No 339
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.75 E-value=1.8e-17 Score=176.25 Aligned_cols=196 Identities=13% Similarity=0.120 Sum_probs=147.5
Q ss_pred CCCCCCcccccccCC-CCCCCCccccCC--------CCCCceee---ccCCCccceecccCCCCCCcEEEEEcCCcE-EE
Q 005147 490 KPSGRPLVRHSQLSS-DGRTSKPLVNER--------SSINNLGS---KEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VK 556 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~--------~~~~~~~l---~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~ 556 (712)
+.+|...+++..|+| +|..++....+. ...+...+ .+|...+..+.| ++ ++...++...++. .+
T Consensus 111 ~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~--~~~~l~~~~~dg~i~i 187 (366)
T 3k26_A 111 YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY-DL--LGEKIMSCGMDHSLKL 187 (366)
T ss_dssp EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEE-CT--TSSEEEEEETTSCEEE
T ss_pred ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEE-CC--CCCEEEEecCCCCEEE
Confidence 346778899999999 777553333222 12233344 689999999999 43 4444444444444 45
Q ss_pred EEccCCcee--------------------------------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC
Q 005147 557 ADLNQGDLL--------------------------------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN 604 (712)
Q Consensus 557 ~dl~~~~~~--------------------------------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~ 604 (712)
|+++++... +|...|.+++|+ +++|++++.|+.|++||+++.....
T Consensus 188 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~ 265 (366)
T 3k26_A 188 WRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDI 265 (366)
T ss_dssp EESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCG
T ss_pred EECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccc
Confidence 999876533 189999999998 7899999999999999998643211
Q ss_pred c-------ccccceEEecCCCCeEEEEEcCCC--CCEEEEEeCCCcEEEEECCCCc----EEEEeccC--CCcEEEEEEe
Q 005147 605 R-------DIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFEGVVQVWDVSRSQ----VLTEMREH--ERRVWSIDFS 669 (712)
Q Consensus 605 ~-------~~~~~~~~~~~~~~v~~v~~~p~~--~~~lasgs~Dg~V~lwD~~~~~----~~~~~~~H--~~~v~sv~fs 669 (712)
. ..........|...|++++|+| + +.+|++|+.||.|++||+.+++ .+..+.+| ...|++++|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 344 (366)
T 3k26_A 266 DKIKPSESNVTILGRFDYSQCDIWYMRFSM-DFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFS 344 (366)
T ss_dssp GGCCTTCCCEEEEEEEECSSCCSSCCCCEE-CTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEEC
T ss_pred cccccCCcchheeccccccCCcEEEEEEcC-CCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeC
Confidence 0 0111234457888999999999 6 8999999999999999999875 45578887 7999999999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCC
Q 005147 670 SADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
| ++.+|++|+.||.|++||+.+
T Consensus 345 ~-~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 345 R-DSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp T-TSSEEEEEETTSEEEEEEC--
T ss_pred C-CCCeEEEEeCCCEEEEEEecC
Confidence 8 999999999999999999863
No 340
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.74 E-value=5.1e-17 Score=185.87 Aligned_cols=196 Identities=10% Similarity=0.067 Sum_probs=158.4
Q ss_pred CCCCcccccccCCCCCCCCccc--------cCCCC----CCceeeccCCCc-cceecccCCCCCCcEEEEEcCCcEEE-E
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLV--------NERSS----INNLGSKEGYSE-GRRSGWINPFLEGLCKYLSFSKLRVK-A 557 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~--------~~~~~----~~~~~l~gh~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~-~ 557 (712)
.+...++++.|+|||+.+++.. .+ .. .+...+.+|.+. +..+.| ++..++...+....++.+. |
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~-~~~~~~~~~~~~~~h~~~~v~~~~~-sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD-DGDSKVPPVVQFTGHGSSVVTTVKF-SPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECC-SSCCSSCSEEEECTTTTSCEEEEEE-CSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECC-CCCCccccceEEecCCCceEEEEEE-CcCCCCCEEEEecCCCEEEEE
Confidence 5667789999999998653321 21 12 466788999999 999999 5532555555555555555 9
Q ss_pred EccCC--------c----eecCCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcCCccccCcccccceEEecCCCCeE
Q 005147 558 DLNQG--------D----LLNSSNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (712)
Q Consensus 558 dl~~~--------~----~~~h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~ 621 (712)
++.++ . +.+|...|.+++|+|++++|++++.+ +.|++||... .......|...|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~---------~~~~~~~~~~~v~ 164 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN---------SLGEVSGHSQRIN 164 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC---------EEEECCSCSSCEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC---------cceeeecCCccEE
Confidence 99754 2 33589999999999999999999988 6899998432 2234457899999
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC---cEEEEEEecCC-CCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHER---RVWSIDFSSAD-PTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 622 ~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~---~v~sv~fsp~~-~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+++|+|.....+++++.||.|++||+.+++++.++.+|.. .|++++|+| + +.+|++|+.|+.|++||+++++.+.
T Consensus 165 ~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp EEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 9999995334899999999999999999999999999999 999999998 7 9999999999999999999999887
Q ss_pred EE
Q 005147 698 HL 699 (712)
Q Consensus 698 ~~ 699 (712)
.+
T Consensus 244 ~~ 245 (615)
T 1pgu_A 244 YI 245 (615)
T ss_dssp EC
T ss_pred Ee
Confidence 76
No 341
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.74 E-value=6.2e-17 Score=168.29 Aligned_cols=193 Identities=15% Similarity=0.142 Sum_probs=149.1
Q ss_pred CCCCcccccccCCCCCCCCccccC-----------CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNE-----------RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
.+...+++..|+|+|..++....+ ....+...+.+|...+..+.| ....+...+.+....+|+..
T Consensus 57 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~i~~~d~~ 132 (313)
T 3odt_A 57 TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF----QDGVVISGSWDKTAKVWKEG 132 (313)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETT
T ss_pred cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe----cCCEEEEEeCCCCEEEEcCC
Confidence 456678899999998865332221 112456778899999999988 23444444444444448832
Q ss_pred CC--ceecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 561 QG--DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 561 ~~--~~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
.. .+..|...|.++.|.| ++++|++++.|+.|++||.... .......|...|.+++|+|. +. +++|+
T Consensus 133 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~i~~~~~~~~-~~-~~~~~ 202 (313)
T 3odt_A 133 SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKV--------IKTFSGIHNDVVRHLAVVDD-GH-FISCS 202 (313)
T ss_dssp EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEE--------EEEECSSCSSCEEEEEEEET-TE-EEEEE
T ss_pred cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCce--------EEEEeccCcccEEEEEEcCC-Ce-EEEcc
Confidence 21 2346899999999998 8999999999999999995421 11222238899999999994 55 99999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.||.|++||+++++++..+.+|...|++++|+| ++ .|++|+.|+.|++||+++++.+..+.
T Consensus 203 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~ 263 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVIT 263 (313)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEE
T ss_pred CCCeEEEEECCchhhhhhhhcCCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEe
Confidence 999999999999999999999999999999998 66 69999999999999999998877654
No 342
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.74 E-value=3.5e-17 Score=172.80 Aligned_cols=198 Identities=13% Similarity=0.055 Sum_probs=155.7
Q ss_pred CCCCcccccccCCCCC-CCCccccCC--------CCCCceeecc--CCCccceecccCCCCCCcEEEEEcCCcEEEEEcc
Q 005147 492 SGRPLVRHSQLSSDGR-TSKPLVNER--------SSINNLGSKE--GYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~-~~~~~~~~~--------~~~~~~~l~g--h~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~ 560 (712)
++...++++.|+++|. .+.....+. .......+.+ |...+..+.| ++ ...+...+.+....+|+++
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~-~~--~~~l~s~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICK-YG--DDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEE-ET--TTEEEEEETTSEEEEECHH
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEe-CC--CCEEEEEcCCCeEEEEccc
Confidence 5667789999999988 553332221 1223467788 9999999999 44 5555555555555559988
Q ss_pred C---------Ccee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC-ccccCcccccceEEecCCCCeEEEEEcC
Q 005147 561 Q---------GDLL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-IINENRDIHYPVVEMASRSKLSSICWNS 627 (712)
Q Consensus 561 ~---------~~~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~~p 627 (712)
+ ++.. .|...|.+++|+|++ +++++.|+.|++||+++ ... ........|...|.+++|+|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~i~~i~~~~ 203 (342)
T 1yfq_A 131 NYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD-----NGTIEESGLKYQIRDVALLP 203 (342)
T ss_dssp HHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC-----CCEEEECSCSSCEEEEEECS
T ss_pred ccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccc-----cceeeecCCCCceeEEEECC
Confidence 7 5532 488999999999887 99999999999999975 221 12234557888999999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCC------cEEEEeccCCC---------cEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 628 YIKSQIASSNFEGVVQVWDVSRS------QVLTEMREHER---------RVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 628 ~~~~~lasgs~Dg~V~lwD~~~~------~~~~~~~~H~~---------~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
.++.+|++|+.||.|+|||++.. +.+..+..|.. .|++++|+| ++.+|++|+.||.|++||+++
T Consensus 204 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 204 KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTT
T ss_pred CCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCcc
Confidence 33889999999999999999887 88888988866 999999998 899999999999999999999
Q ss_pred CcEEEEEe
Q 005147 693 AILLLHLV 700 (712)
Q Consensus 693 ~~~v~~~~ 700 (712)
++.+..+.
T Consensus 283 ~~~~~~~~ 290 (342)
T 1yfq_A 283 RKKIKNFA 290 (342)
T ss_dssp TEEEEECC
T ss_pred HhHhhhhh
Confidence 98876643
No 343
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.74 E-value=5.3e-17 Score=180.44 Aligned_cols=194 Identities=12% Similarity=0.043 Sum_probs=139.4
Q ss_pred CCCCCcccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEEEEccCC--ceecC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVKADLNQG--DLLNS 567 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~dl~~~--~~~~h 567 (712)
.+|...+.+++|+|||.- ..+..+......+.-.+|...|..+.| +| +|. +++.+.+....+|+...- .+. |
T Consensus 49 ~gh~~~v~~V~FsPdg~~-~~~~~~~~~~~~~~~~~~~~~V~~vaw-SP--dG~~LAs~s~dg~V~iwd~~~~l~~l~-~ 123 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLEFE-NKLDFELAQQNGLLNSQPVCYPRVCKP-SP--IDDWMAVLSNNGNVSVFKDNKMLTNLD-S 123 (588)
T ss_dssp SSBGGGTEEEEEECCCCC-CTTTTSCCCSSCSSTTSCSCCEEEEEE-CS--SSSCEEEEETTSCEEEEETTEEEEECC-C
T ss_pred cCCCccEEEEEECCCCCc-ceEEEEeCCCceEeecCCCCcEEEEEE-CC--CCCEEEEEeCCCcEEEEeCCceeeecc-C
Confidence 468889999999999943 233333222222222266888999999 44 444 566666655566985431 112 4
Q ss_pred CC-----CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc-cccceE---EecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 568 SN-----LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD-IHYPVV---EMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 568 ~~-----~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~-~~~~~~---~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
.. .|.+++|+|||++||+|+.||+|+|||+.+....... +..... ..+|...|.+|+|+| ++ +++++.
T Consensus 124 ~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~ 200 (588)
T 2j04_A 124 KGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALS 200 (588)
T ss_dssp SSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEET
T ss_pred CCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeC
Confidence 43 5999999999999999999999999999763110000 000111 146788999999999 46 889999
Q ss_pred CCcEEEEECCCCc---EEEEe-ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 639 EGVVQVWDVSRSQ---VLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 639 Dg~V~lwD~~~~~---~~~~~-~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
|++|++||+..+. ...++ .+|...|++|+|+ +++||+++ |++|++||+..++..
T Consensus 201 D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~~~ 258 (588)
T 2j04_A 201 NNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYSIS 258 (588)
T ss_dssp TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCeEE
Confidence 9999999998876 34667 4788999999998 58999998 699999999987763
No 344
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.74 E-value=2.2e-17 Score=181.38 Aligned_cols=164 Identities=11% Similarity=0.173 Sum_probs=129.4
Q ss_pred eccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccC-Cc-----------eecCCCCeeEEEEcCCC-CEEEEEeCC
Q 005147 524 SKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQ-GD-----------LLNSSNLVCSLSFDRDG-ELFAAAGVN 589 (712)
Q Consensus 524 l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~-~~-----------~~~h~~~V~~i~f~~~~-~~lat~~~d 589 (712)
+.+|...+..+.| ++ ++...+.. +++.+. |++.. +. +.+|...|.+++|+|++ ++|++|+.|
T Consensus 173 ~~~h~~~v~~~~~-~~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 248 (447)
T 3dw8_B 173 ANAHTYHINSISI-NS--DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK 248 (447)
T ss_dssp CSCCSSCCCEEEE-CT--TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT
T ss_pred ccCCCcceEEEEE-cC--CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC
Confidence 4799999999999 43 55544555 455555 99983 32 33789999999999998 999999999
Q ss_pred CcEEEEEcCCccccCcccccceEEecCCC------------CeEEEEEcCCCCCEEEEEeCCCcEEEEECCC-CcEEEEe
Q 005147 590 KKIKVFECDAIINENRDIHYPVVEMASRS------------KLSSICWNSYIKSQIASSNFEGVVQVWDVSR-SQVLTEM 656 (712)
Q Consensus 590 ~~I~iwD~~~~~~~~~~~~~~~~~~~~~~------------~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~-~~~~~~~ 656 (712)
++|++||+++..... ........|.. .|++++|+| ++.+|++++. |.|+|||+++ ++++.++
T Consensus 249 g~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 249 GTIRLCDMRASALCD---RHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp SCEEEEETTTCSSSC---TTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCE
T ss_pred CeEEEEECcCCcccc---ceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCcccccee
Confidence 999999998642110 01122334443 899999999 6999999999 9999999997 8899999
Q ss_pred ccCCCc---------------EEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 657 REHERR---------------VWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 657 ~~H~~~---------------v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
.+|... +.+++|+| ++.+|++|+.|+.|++||+.+++.+.
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred eccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcCCCccee
Confidence 988642 33499998 89999999999999999999988763
No 345
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.74 E-value=1.6e-16 Score=171.47 Aligned_cols=201 Identities=18% Similarity=0.218 Sum_probs=154.5
Q ss_pred CCCCCCCcccccccCC-CCCCCCccccCCC----------CCCcee-----------eccCCCccceecccCCCCCCcEE
Q 005147 489 VKPSGRPLVRHSQLSS-DGRTSKPLVNERS----------SINNLG-----------SKEGYSEGRRSGWINPFLEGLCK 546 (712)
Q Consensus 489 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~----------~~~~~~-----------l~gh~~~~~~~~~~~~~~~~~~~ 546 (712)
...+|...+++..|+| ||..++....+.. ....+. ..+|...+..+.| ++....++.
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~ 116 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQW-YPHDTGMFT 116 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEE-CTTCTTCEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEE-ccCCCcEEE
Confidence 4667899999999999 9986644322221 111111 1369999999999 454444555
Q ss_pred EEEcCCcEEEEEccCCcee---cCCCCeeEEEEcCC---CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCe
Q 005147 547 YLSFSKLRVKADLNQGDLL---NSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 620 (712)
Q Consensus 547 ~~~~~~~~v~~dl~~~~~~---~h~~~V~~i~f~~~---~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v 620 (712)
..+.+....+|++.++... .+...+.++.|++. +.++++|+.|+.|++||+++. ........|...|
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-------~~~~~~~~~~~~v 189 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-------SCSHILQGHRQEI 189 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS-------CCCEEECCCCSCE
T ss_pred EEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-------ceeeeecCCCCcE
Confidence 5555555555999987654 47889999999984 459999999999999999753 2233455789999
Q ss_pred EEEEEcCCCCCEEEEEeCCCcEEEEECCCCc-EEEEe---------------ccCCCcEEEEEEecCCCCEEEEEECCCc
Q 005147 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEM---------------REHERRVWSIDFSSADPTLLASGSDDGS 684 (712)
Q Consensus 621 ~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~-~~~~~---------------~~H~~~v~sv~fsp~~~~~l~sgs~D~~ 684 (712)
++++|+|....+|++|+.||.|++||++++. ++..+ .+|...|++++|+| ++.+|++|+.|+.
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~ 268 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNR 268 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecCCCe
Confidence 9999999544479999999999999999875 55555 57899999999998 9999999999999
Q ss_pred EEEEeCCCCcEEEE
Q 005147 685 VKLWSINQAILLLH 698 (712)
Q Consensus 685 v~lWd~~~~~~v~~ 698 (712)
|++||+++++.+..
T Consensus 269 i~vwd~~~~~~~~~ 282 (408)
T 4a11_B 269 MRLWNSSNGENTLV 282 (408)
T ss_dssp EEEEETTTCCBCCC
T ss_pred EEEEECCCCcccee
Confidence 99999999876543
No 346
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.74 E-value=5.2e-18 Score=184.61 Aligned_cols=129 Identities=10% Similarity=0.107 Sum_probs=101.6
Q ss_pred eecCCCCeeEEEEcC--------CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 564 LLNSSNLVCSLSFDR--------DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 564 ~~~h~~~V~~i~f~~--------~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
+.+|.+.|.+|+|+| |+++|||||.|++|+|||+++. ........|...|.+|+|+|.++++|++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~-------~~~~~~~~~~~~v~~v~~~p~~~~~l~~ 204 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE-------GPILAGYPLSSPGISVQFRPSNPNQLIV 204 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT-------EEEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC-------ceeeeecCCCCCcEEEEECCCCCceEEe
Confidence 457999999999998 7899999999999999999642 2345567889999999999976679999
Q ss_pred EeCCCcEEEEECCCCcEEEE-------------------------eccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeC
Q 005147 636 SNFEGVVQVWDVSRSQVLTE-------------------------MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~~~~~-------------------------~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~ 690 (712)
|+.||+|++||+++++.... ..+|...|.++.|++.++..|++++.|+++++||+
T Consensus 205 ~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 205 GERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp EETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC
T ss_pred cCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEEC
Confidence 99999999999998764332 24688899999998669999999999999999999
Q ss_pred CCCcEEEEE
Q 005147 691 NQAILLLHL 699 (712)
Q Consensus 691 ~~~~~v~~~ 699 (712)
.++.....+
T Consensus 285 ~~~~~~~~l 293 (393)
T 4gq1_A 285 FANNDYNEI 293 (393)
T ss_dssp ---------
T ss_pred ccCCCCceE
Confidence 987765544
No 347
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.74 E-value=3.8e-17 Score=173.31 Aligned_cols=194 Identities=13% Similarity=0.139 Sum_probs=146.5
Q ss_pred CCCCcccccccCCC---CCCCCccccC---------CCCCCceeeccCCCccceecccCC---CCCCcEEEEEcCCcE-E
Q 005147 492 SGRPLVRHSQLSSD---GRTSKPLVNE---------RSSINNLGSKEGYSEGRRSGWINP---FLEGLCKYLSFSKLR-V 555 (712)
Q Consensus 492 ~~~~~~~~~~~~~~---g~~~~~~~~~---------~~~~~~~~l~gh~~~~~~~~~~~~---~~~~~~~~~~~~~~~-v 555 (712)
++...++++.|+++ |..++....+ ....+...+.+|.+.+..+.|... ..++...++...++. .
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 45667889999998 4654333222 222267788999999999987431 334444444444444 4
Q ss_pred EEEccCCc-ee----cC----CCCeeEEE----EcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEE
Q 005147 556 KADLNQGD-LL----NS----SNLVCSLS----FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 622 (712)
Q Consensus 556 ~~dl~~~~-~~----~h----~~~V~~i~----f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~ 622 (712)
+|++.++. .. .| ...|.++. |+|++.+|++|+.|+.|++||+++. .......|...|++
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~v~~ 214 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM--------ALRWETNIKNGVCS 214 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEE
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC--------ceeeecCCCCceEE
Confidence 59998765 22 22 34899998 7889999999999999999999762 22445678899999
Q ss_pred EEEcCC--CCCEEEEEeCCCcEEEEECCCCcEEEEec-----cCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCCCCc
Q 005147 623 ICWNSY--IKSQIASSNFEGVVQVWDVSRSQVLTEMR-----EHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 623 v~~~p~--~~~~lasgs~Dg~V~lwD~~~~~~~~~~~-----~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~~~~ 694 (712)
++|+|. ++.+|++|+.||.|++||+++++++..+. +|...|++++|+| ++. +|++|+.|+.|++||++++.
T Consensus 215 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 215 LEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCS
T ss_pred EEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCc
Confidence 999994 48999999999999999999876554444 8999999999998 776 89999999999999998654
No 348
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.74 E-value=1.8e-16 Score=175.44 Aligned_cols=174 Identities=14% Similarity=0.173 Sum_probs=140.7
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEc--CCCCEEEEEeCCCcEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFD--RDGELFAAAGVNKKIK 593 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~--~~~~~lat~~~d~~I~ 593 (712)
+...+.||.+.+..+.| ..++.+...+.+....+|++.++... +|.+.|.+++|+ +++.+|++|+.|++|+
T Consensus 154 ~~~~~~~h~~~V~~l~~---~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKY---AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp EEEEECCCSSCEEEEEE---CSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred EEEEEeCCCcCEEEEEE---cCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 45677899999999999 34556555555555556999887643 699999999998 5778999999999999
Q ss_pred EEEcCCccccCccc----------------ccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 005147 594 VFECDAIINENRDI----------------HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR 657 (712)
Q Consensus 594 iwD~~~~~~~~~~~----------------~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~ 657 (712)
+||+++........ .......+|...|.+++. +++++++|+.||.|++||+++++++.++.
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 307 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG---HGNIVVSGSYDNTLIVWDVAQMKCLYILS 307 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 99998643211100 012345578888888854 36899999999999999999999999999
Q ss_pred cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 658 ~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+|...|++++|+| ++.++++|+.|++|++||+++++++..+-
T Consensus 308 ~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 349 (464)
T 3v7d_B 308 GHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQ 349 (464)
T ss_dssp CCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 9999999999998 99999999999999999999998887653
No 349
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.2e-16 Score=169.98 Aligned_cols=170 Identities=12% Similarity=0.152 Sum_probs=137.8
Q ss_pred CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCc-EEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 517 SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL-RVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 517 ~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
+....+.++||.+.+..+.| + .++...++...++ ..+|++.++... +|.+.|.+++|+|++++|++++.|+.
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~-s--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 97 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKY-N--KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYS 97 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEE-C--TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred cccccEEEEEeeceEEEEEE-c--CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 34566889999999999999 3 3554444444444 455999887644 68999999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC-----CcEEEEECCCCc-----------EEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE-----GVVQVWDVSRSQ-----------VLTE 655 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D-----g~V~lwD~~~~~-----------~~~~ 655 (712)
|++||+.+. ..+....+...|.+++|+| ++.+|++++.+ |.|.+||+.++. .+..
T Consensus 98 i~iwd~~~~--------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 98 IKLWDVSNG--------QCVATWKSPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp EEEEETTTC--------CEEEEEECSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred EEEEECCCC--------cEEEEeecCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 999999762 2334445888999999999 69999999999 999999998653 4555
Q ss_pred eccCCC--cEEEEEEecCCCCEEEEEECCCcEEEEeCCC-CcEEEEE
Q 005147 656 MREHER--RVWSIDFSSADPTLLASGSDDGSVKLWSINQ-AILLLHL 699 (712)
Q Consensus 656 ~~~H~~--~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~-~~~v~~~ 699 (712)
+..|.. .+.+++|+| ++.+|++|+.|+.|++||+++ +..+..+
T Consensus 169 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 214 (369)
T 3zwl_B 169 IITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSI 214 (369)
T ss_dssp EECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEE
T ss_pred ccCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEE
Confidence 667776 999999998 999999999999999999998 4555443
No 350
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.74 E-value=1e-16 Score=177.45 Aligned_cols=195 Identities=12% Similarity=0.152 Sum_probs=152.9
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcE-EEEEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR-VKADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~dl~ 560 (712)
+.+|...++++.|+++| .+.....+. .......+.+|.+.+..+.| .+..++...++...++. .+|++.
T Consensus 158 ~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~-~~~~~~~~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI-VEYKNIKYIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp ECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-EESSSCEEEEEEETTSCEEEEECC
T ss_pred EeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEE-ecCCCCCEEEEEcCCCcEEEeeCC
Confidence 45788889999999887 322222221 12345678899999999999 44455444444444444 459987
Q ss_pred CCc---------------------------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEE
Q 005147 561 QGD---------------------------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (712)
Q Consensus 561 ~~~---------------------------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~ 613 (712)
++. +.+|...|.++ ++++++|++|+.|+.|++||+++. ......
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~-------~~~~~~ 306 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM-------KCLYIL 306 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT-------EEEEEE
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC-------cEEEEe
Confidence 653 33578888877 567899999999999999999752 223345
Q ss_pred ecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 614 ~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
.+|...|++++|+| ++++|++|+.||+|++||+++++++.++.+|...|.+++|+ +.+|++|+.|++|++||++++
T Consensus 307 ~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 307 SGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp CCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTC
T ss_pred cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCC
Confidence 57899999999999 68999999999999999999999999999999999999997 489999999999999999998
Q ss_pred cEEEEE
Q 005147 694 ILLLHL 699 (712)
Q Consensus 694 ~~v~~~ 699 (712)
......
T Consensus 383 ~~~~~~ 388 (464)
T 3v7d_B 383 SRKFSY 388 (464)
T ss_dssp CEEEEE
T ss_pred ceeeee
Confidence 876655
No 351
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.74 E-value=5.4e-17 Score=192.70 Aligned_cols=170 Identities=19% Similarity=0.211 Sum_probs=140.9
Q ss_pred ceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
.-.++||.+.+.++.| ++ ++...+....++.+. |++.++.. .+|.+.|.+++|+|++++|++|+.|+.|++|
T Consensus 6 ~~~~~~h~~~v~~i~~-sp--~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDF-HP--TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEEEEEECSCEEEEEE-CS--SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeeecCCCceEEEEE-CC--CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 3467888888888888 33 454444444455544 88877653 3689999999999999999999999999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCC
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
|+.++ .......+|...|++++|+| ++.+|++|+.||+|++||+.++ .....+.+|...|++++|+|.++.
T Consensus 83 ~~~~~-------~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 83 NYNTG-------EKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp ETTTC-------CEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE
T ss_pred ECCCC-------cEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC
Confidence 99753 22334567999999999999 5899999999999999999987 778889999999999999986789
Q ss_pred EEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 675 LLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+|++|+.|++|++||++++.....+..
T Consensus 155 ~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp EEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCcceeEEec
Confidence 999999999999999998887766553
No 352
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.73 E-value=6e-17 Score=179.27 Aligned_cols=170 Identities=16% Similarity=0.107 Sum_probs=134.5
Q ss_pred eeeccCCCccceecccCCCCCCcE-EEEEcCCcEE-EEEcc--CCcee------cCCCCeeEEEEcCCCCEEEEEeCCCc
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLC-KYLSFSKLRV-KADLN--QGDLL------NSSNLVCSLSFDRDGELFAAAGVNKK 591 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~-~~~~~~~~~v-~~dl~--~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~ 591 (712)
....+|.+.+..+.| + .++.. .+....++.+ +|++. ++... .|...|++++|+|++.+|++|+.|+.
T Consensus 96 ~~~~~~~~~v~~~~~-s--~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~ 172 (450)
T 2vdu_B 96 LGAPPIYSYIRNLRL-T--SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGD 172 (450)
T ss_dssp ----CCCCCEEEEEE-C--TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCccCCceEEEEE-c--CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCc
Confidence 345678888888888 3 34443 2444444444 49888 65533 46789999999999999999999999
Q ss_pred EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC---CCEEEEEeCCCcEEEEECCCCcEEEE-eccCCCcEEEEE
Q 005147 592 IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI---KSQIASSNFEGVVQVWDVSRSQVLTE-MREHERRVWSID 667 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~---~~~lasgs~Dg~V~lwD~~~~~~~~~-~~~H~~~v~sv~ 667 (712)
|++||+.+...... ......+|...|++++|+| + +.+|++|+.|++|++||+++++++.. +.+|...|++++
T Consensus 173 v~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 248 (450)
T 2vdu_B 173 VYSIDINSIPEEKF---TQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSIC 248 (450)
T ss_dssp EEEEETTSCCCSSC---CCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEE
T ss_pred EEEEecCCcccccc---cceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEE
Confidence 99999976322110 1113456889999999999 5 78999999999999999999998888 568999999999
Q ss_pred EecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 668 FSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 668 fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|+ ++.+|++|+.|++|++||+++++++..+-
T Consensus 249 ~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 249 CG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EC--STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred EC--CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 99 89999999999999999999999887764
No 353
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.73 E-value=6.6e-17 Score=174.13 Aligned_cols=166 Identities=13% Similarity=0.080 Sum_probs=125.4
Q ss_pred cceecccCCCCCCc-EEEEEcC-CcEEE-EEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC
Q 005147 531 GRRSGWINPFLEGL-CKYLSFS-KLRVK-ADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN 604 (712)
Q Consensus 531 ~~~~~~~~~~~~~~-~~~~~~~-~~~v~-~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~ 604 (712)
+..+.| +.||. +.+++.+ ++.++ |++.++... .|.+.|.+|+|+|||+++++++.+ .+.+|+..++..
T Consensus 136 ~~~v~f---SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~-- 209 (365)
T 4h5i_A 136 TKLVYI---SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC-- 209 (365)
T ss_dssp EEEEEE---CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE--
T ss_pred EEEEEE---cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcc--
Confidence 445566 33443 3344432 34444 888877644 578889999999999999998855 566676654211
Q ss_pred cccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC----cEEEEECCCCcE----EEEeccCCCcEEEEEEecCCCCEE
Q 005147 605 RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG----VVQVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLL 676 (712)
Q Consensus 605 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg----~V~lwD~~~~~~----~~~~~~H~~~v~sv~fsp~~~~~l 676 (712)
........|...|.+|+|+| ++.++++++.|+ .+.+||+..... ...+.+|...|++++|+| ++.+|
T Consensus 210 ---~~~~~~~~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~l 284 (365)
T 4h5i_A 210 ---IARKTDFDKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELA 284 (365)
T ss_dssp ---EEEECCCCTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEE
T ss_pred ---eeeeecCCCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCce
Confidence 11122346788899999999 699999999887 688999887653 456789999999999998 99999
Q ss_pred EEEECCCcEEEEeCCCCcEEEEEeceeeccC
Q 005147 677 ASGSDDGSVKLWSINQAILLLHLVDVSFETK 707 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v~~~~~~~~~~~ 707 (712)
|+||.|++|+|||+++++++.+++.+|....
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAI 315 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCE
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCE
Confidence 9999999999999999999999887765433
No 354
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.73 E-value=1e-16 Score=199.74 Aligned_cols=171 Identities=17% Similarity=0.226 Sum_probs=145.5
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIK 593 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~ 593 (712)
...+.+.||.+.+..+.| +.++...++...++.+ +|++.++.. .+|.+.|.+++|+|++++||+|+.|++|+
T Consensus 606 ~~~~~~~~h~~~v~~~~~---s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACF---SQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVK 682 (1249)
T ss_dssp CCSEEECCCSSCEEEEEE---CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cceEEEecccccEEEEEE---CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEE
Confidence 456788999999999999 4455545554455554 599988764 36999999999999999999999999999
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCC-CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCC
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~ 672 (712)
|||+.++ .......+|...|++++|+|. +..++++|+.||.|++||+++++++.++.+|...|++++|+| +
T Consensus 683 vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp-~ 754 (1249)
T 3sfz_A 683 IWDSATG-------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-D 754 (1249)
T ss_dssp EEETTTC-------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS-S
T ss_pred EEECCCC-------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec-C
Confidence 9999763 223345689999999999985 355899999999999999999999999999999999999998 9
Q ss_pred CCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 673 PTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 673 ~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.+|++|+.|++|++||++++.....+.
T Consensus 755 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 755 DELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp TTEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred CCEEEEEECCCeEEEEeCCCCcccceec
Confidence 9999999999999999999988776653
No 355
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.73 E-value=9.8e-17 Score=190.44 Aligned_cols=201 Identities=13% Similarity=0.162 Sum_probs=160.4
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
+.+|...+++..|+|||..+++...+. .......+.+|.+.+..+.| ..++...+....++.+. |++.
T Consensus 51 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSEEEEEEGG
T ss_pred EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEE---eCCCCEEEEEcCCCEEEEEECC
Confidence 346777899999999998764433222 22345678899999999999 44554444455555554 9998
Q ss_pred CC-c----eecCCCCeeEEEEcC-CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC-CCCEE
Q 005147 561 QG-D----LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQI 633 (712)
Q Consensus 561 ~~-~----~~~h~~~V~~i~f~~-~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~l 633 (712)
++ . +.+|...|.+++|+| +++.|++|+.|++|++||+++... .......+...+.+++|+|. ++.+|
T Consensus 128 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 128 NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP------NFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp GTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC------SEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred CCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc------eeEEecCCCCCEEEEEEEECCCCCEE
Confidence 76 2 346899999999999 889999999999999999965211 11223344588999999982 48899
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 634 asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
++|+.||.|++||+++++++.++.+|...|++++|+| ++.+|++|+.||.|++||+.++..+..+.
T Consensus 202 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 9999999999999999999999999999999999998 89999999999999999999988876654
No 356
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.72 E-value=2.8e-16 Score=171.03 Aligned_cols=164 Identities=18% Similarity=0.245 Sum_probs=135.8
Q ss_pred ccCCCccceecccCCCCCCcEEEEE-cCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLS-FSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA 599 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~ 599 (712)
.+|...+..+.| ++ ++...+.. .+....+|++.+++.. +|...|.+++| ++++|++|+.|+.|++||++.
T Consensus 131 ~~~~~~v~~v~~-s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 131 TDESTYVASVKW-SH--DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp CCTTCCEEEEEE-CT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred cCCCCCEEEEEE-CC--CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc
Confidence 348889999999 43 54444444 4444455999877643 68999999999 467999999999999999974
Q ss_pred ccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEE
Q 005147 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASG 679 (712)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sg 679 (712)
. .........|...|.+++|+| ++.+|++|+.||.|++||+++++++.++..|...|.+++|+|....++++|
T Consensus 206 ~------~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 206 A------NHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp S------SCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEE
T ss_pred C------cceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEe
Confidence 2 122345567999999999999 699999999999999999999999999999999999999999666888887
Q ss_pred E--CCCcEEEEeCCCCcEEEEEe
Q 005147 680 S--DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 680 s--~D~~v~lWd~~~~~~v~~~~ 700 (712)
+ .|+.|++||+++++++..+-
T Consensus 279 ~gs~d~~i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 279 GGTMDKQIHFWNAATGARVNTVD 301 (401)
T ss_dssp CCTTTCEEEEEETTTCCEEEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEEe
Confidence 6 79999999999999887663
No 357
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.3e-16 Score=174.62 Aligned_cols=190 Identities=15% Similarity=0.093 Sum_probs=146.6
Q ss_pred CCCCCcccccccCCCCCCC-CccccCC----------CCCCceeec--cCCCccceecccCCCCCCcEEEEEcCCcEEE-
Q 005147 491 PSGRPLVRHSQLSSDGRTS-KPLVNER----------SSINNLGSK--EGYSEGRRSGWINPFLEGLCKYLSFSKLRVK- 556 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~-~~~~~~~----------~~~~~~~l~--gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~- 556 (712)
+++...++++.|+|||..+ ++...+. .......+. +|...+..+.| ..++...+....++.+.
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~---sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI---AEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE---CTTSSEEEEEETTSEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEE---cCCCCEEEEEeCCCcEEE
Confidence 4566689999999999985 3332221 112223333 67788889999 34554445444556655
Q ss_pred EEccCCc--------eecCCCCeeEEEEcCC---CCEEEEEeCCCcEEEEEcCCccccCcccccceE-EecCCCCeEEEE
Q 005147 557 ADLNQGD--------LLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSIC 624 (712)
Q Consensus 557 ~dl~~~~--------~~~h~~~V~~i~f~~~---~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~-~~~~~~~v~~v~ 624 (712)
|++.++. +.+|.+.|.+++|+|+ +.+|++|+.|++|++||+++.. .... ..+|...|++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~-------~~~~~~~~h~~~v~~~~ 248 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF-------IVDKWLFGHKHFVSSIC 248 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-------CEEEECCCCSSCEEEEE
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-------eeeeeecCCCCceEEEE
Confidence 8887653 3468999999999999 8999999999999999997521 1222 347899999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC-------------------------CCcEEEEEEecCCCCEEEEE
Q 005147 625 WNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-------------------------ERRVWSIDFSSADPTLLASG 679 (712)
Q Consensus 625 ~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H-------------------------~~~v~sv~fsp~~~~~l~sg 679 (712)
|+ ++.+|++|+.|++|+|||+++++++.++..| ...|.+++|+| ++.+|+++
T Consensus 249 ~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~ 325 (450)
T 2vdu_B 249 CG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK-NLPFVAFF 325 (450)
T ss_dssp EC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-SSSEEEEE
T ss_pred EC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-CCCEEEEE
Confidence 99 6999999999999999999999998888632 45799999998 89999999
Q ss_pred E-CCCcEEEEeC--CCC
Q 005147 680 S-DDGSVKLWSI--NQA 693 (712)
Q Consensus 680 s-~D~~v~lWd~--~~~ 693 (712)
+ .|+.|+|||+ .++
T Consensus 326 ~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 326 VEATKCIIILEMSEKQK 342 (450)
T ss_dssp ETTCSEEEEEEECSSST
T ss_pred ECCCCeEEEEEeccCCC
Confidence 9 8999999999 555
No 358
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.4e-16 Score=188.32 Aligned_cols=165 Identities=14% Similarity=0.170 Sum_probs=129.9
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCC--c----eecCCCCeeEEEEcCC--CCEEEEEeCCCcE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQG--D----LLNSSNLVCSLSFDRD--GELFAAAGVNKKI 592 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~--~----~~~h~~~V~~i~f~~~--~~~lat~~~d~~I 592 (712)
..+.||.+.|..+.| ++ ++...++...++.+ +|++..+ . +.+|.+.|.+++|+|+ +++|++|+.||.|
T Consensus 3 ~~l~gH~~~V~~l~~-s~--dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVL-DY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECC-CS--SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEE-CC--CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 467899999999999 43 44333444444554 4998733 2 3479999999999987 9999999999999
Q ss_pred EEEEcCCccccCcccccceEEecCCCCeEEEEEcCCC-CCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCcEEEEEEe
Q 005147 593 KVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEGVVQVWDVSRS--QVLTEMREHERRVWSIDFS 669 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~lasgs~Dg~V~lwD~~~~--~~~~~~~~H~~~v~sv~fs 669 (712)
++||+.++. .........|...|++++|+|.. +++|++|+.||.|++||++++ .....+.+|...|++++|+
T Consensus 80 ~vwd~~~~~-----~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 80 LIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp EEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred EEEECCCCc-----ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence 999997521 12334456789999999999932 889999999999999999987 3456778899999999999
Q ss_pred cC------------CCCEEEEEECCCcEEEEeCCCCc
Q 005147 670 SA------------DPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 670 p~------------~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|. ++.++++|+.||+|++||++++.
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~ 191 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTT
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCc
Confidence 85 58999999999999999998875
No 359
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.71 E-value=1.3e-15 Score=167.70 Aligned_cols=214 Identities=17% Similarity=0.256 Sum_probs=155.8
Q ss_pred hhhhhHhHHHHHHHhhccCCC----CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecc
Q 005147 469 RLMKNFKKLESAYFLTRCRPV----KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGW 536 (712)
Q Consensus 469 ~~~~~~~~l~~~y~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~ 536 (712)
++......++......+.... ..++...+.+..+ ||..++....+. .......+.||.+.+..+.|
T Consensus 104 ~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 181 (435)
T 1p22_A 104 KIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 181 (435)
T ss_dssp HHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC
T ss_pred hhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE
Confidence 334444455555444333321 1234445666555 565443322221 12345678899999998888
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceE
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~ 612 (712)
.+..+...+.+....+|++.+++.. +|...|.+++|+ +++|++|+.|+.|++||+++... ......
T Consensus 182 ----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~----~~~~~~ 251 (435)
T 1p22_A 182 ----DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTD----ITLRRV 251 (435)
T ss_dssp ----CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSC----CEEEEE
T ss_pred ----CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCC----ceeeeE
Confidence 3345555555544555999887644 689999999997 46999999999999999976321 111245
Q ss_pred EecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 613 ~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
..+|...|.+++|+ +++|++|+.||.|++||+++++++.++.+|...|.+++|+ +.++++|+.|++|++||+++
T Consensus 252 ~~~~~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 252 LVGHRAAVNVVDFD---DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp ECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTT
T ss_pred ecCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCC
Confidence 56889999999994 6899999999999999999999999999999999999996 58999999999999999999
Q ss_pred CcEEEEEe
Q 005147 693 AILLLHLV 700 (712)
Q Consensus 693 ~~~v~~~~ 700 (712)
++++..+.
T Consensus 326 ~~~~~~~~ 333 (435)
T 1p22_A 326 GACLRVLE 333 (435)
T ss_dssp CCEEEEEC
T ss_pred CCEEEEEe
Confidence 98886654
No 360
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.7e-16 Score=168.89 Aligned_cols=161 Identities=9% Similarity=-0.008 Sum_probs=120.4
Q ss_pred ccCCCccceecccCCCCCCcEEE-EEcCCcEEEEEccCCcee-----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKY-LSFSKLRVKADLNQGDLL-----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD 598 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~dl~~~~~~-----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~ 598 (712)
.+|.+.+..+.| ++..++...+ .+.+....+|+++++... .|...|.+++|+|++.+||+|+.|+.|++||++
T Consensus 122 ~~~~~~v~~~~~-~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 122 VDSANEIIYMYG-HNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp CCCSSCEEEEEC-CC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred cCCCCCEEEEEc-CCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 367788999999 5533554444 444444455999988764 356689999999999999999999999999998
Q ss_pred CccccCcccccceEEec-CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEecc---CCCcEE--EEEEecCC
Q 005147 599 AIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE---HERRVW--SIDFSSAD 672 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~---H~~~v~--sv~fsp~~ 672 (712)
+.... +..... |...|++|+|+| ++.+|++|+ |++|+|||+++++++.++.. |...+. +++|+| +
T Consensus 201 ~~~~~------~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 271 (343)
T 3lrv_A 201 SPDQA------SSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD-S 271 (343)
T ss_dssp CTTSC------CEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT-T
T ss_pred CCCCC------ccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC-C
Confidence 63211 122334 899999999999 699999999 55999999999877655443 545554 699998 9
Q ss_pred CCEEEEEEC-CCcEEEEeCCCCcE
Q 005147 673 PTLLASGSD-DGSVKLWSINQAIL 695 (712)
Q Consensus 673 ~~~l~sgs~-D~~v~lWd~~~~~~ 695 (712)
+.+|++|+. |+.|+||++.+...
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCEEEEecCCCCcEEEEEEccccc
Confidence 999999998 99999999865543
No 361
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.70 E-value=4.6e-16 Score=193.76 Aligned_cols=198 Identities=17% Similarity=0.213 Sum_probs=158.8
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEcc
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLN 560 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~ 560 (712)
..+|...++++.|||||..+++...+. .......+.+|.+.+..+.| +.++...++...++.+. |++.
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAF---SSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEE---ecCCCEEEEEeCCCeEEEEECC
Confidence 457888999999999998764443322 22345678899999999999 34554444444555554 9999
Q ss_pred CCcee----cCCCCeeEEEEcC--CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE
Q 005147 561 QGDLL----NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634 (712)
Q Consensus 561 ~~~~~----~h~~~V~~i~f~~--~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la 634 (712)
++++. +|...|.+++|+| ++.++++|+.|+.|++||++++ .......+|...|++++|+| ++.+|+
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~-------~~~~~~~~h~~~v~~~~~sp-~~~~l~ 759 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK-------ECRNTMFGHTNSVNHCRFSP-DDELLA 759 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS-------SEEEEECCCSSCEEEEEECS-STTEEE
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc-------chhheecCCCCCEEEEEEec-CCCEEE
Confidence 88754 6999999999999 4569999999999999999763 23344568999999999999 699999
Q ss_pred EEeCCCcEEEEECCCCcEEEEe-------------------------------------------------------ccC
Q 005147 635 SSNFEGVVQVWDVSRSQVLTEM-------------------------------------------------------REH 659 (712)
Q Consensus 635 sgs~Dg~V~lwD~~~~~~~~~~-------------------------------------------------------~~H 659 (712)
+|+.||+|++||+++++....+ .+|
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 9999999999999877544332 268
Q ss_pred CCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 660 ~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
...|++++|+| ++.++++|+.|+.|++||+.++..+..+
T Consensus 840 ~~~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 840 HSTIQYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp SSCCCEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred CCceEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeec
Confidence 88999999998 9999999999999999999998877654
No 362
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.70 E-value=4.3e-16 Score=178.17 Aligned_cols=199 Identities=8% Similarity=0.097 Sum_probs=155.9
Q ss_pred CCCCCCc-ccccccCC--CCCCCCccccCCC----------------CCCceeeccCCCccceecccCCCCCCcEEEEEc
Q 005147 490 KPSGRPL-VRHSQLSS--DGRTSKPLVNERS----------------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSF 550 (712)
Q Consensus 490 ~~~~~~~-~~~~~~~~--~g~~~~~~~~~~~----------------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~ 550 (712)
+.+|... +++..|+| ||..+++...+.. ......+.+|...+..+.| + .++...+...
T Consensus 59 ~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s--~~~~~l~~~~ 135 (615)
T 1pgu_A 59 FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW-D--FEGRRLCVVG 135 (615)
T ss_dssp ECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE-C--TTSSEEEEEE
T ss_pred EecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEE-e--CCCCEEEEec
Confidence 4567778 99999999 9987644433321 1233467789999999999 3 4444444433
Q ss_pred CC----cEEE-EEccC--CceecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCC---C
Q 005147 551 SK----LRVK-ADLNQ--GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS---K 619 (712)
Q Consensus 551 ~~----~~v~-~dl~~--~~~~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~---~ 619 (712)
.+ +.+. |+... ..+.+|...|.+++|+|++. +|++|+.|+.|++||+.+. ........|.. .
T Consensus 136 ~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-------~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 136 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-------KFSASDRTHHKQGSF 208 (615)
T ss_dssp CCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-------EEEEEECSSSCTTCC
T ss_pred cCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-------ceeeeecccCCCCce
Confidence 33 3444 65321 12347899999999999998 8999999999999998652 22233456777 8
Q ss_pred eEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEe-c---cCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM-R---EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 620 v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~-~---~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
|++++|+|.++++|++|+.||.|++||+++++.+..+ . .|...|++++|+ ++.+|++++.|+.|++||+++++.
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999999943899999999999999999999999999 6 899999999999 899999999999999999999988
Q ss_pred EEEEe
Q 005147 696 LLHLV 700 (712)
Q Consensus 696 v~~~~ 700 (712)
+..+.
T Consensus 287 ~~~~~ 291 (615)
T 1pgu_A 287 VQKWT 291 (615)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 77664
No 363
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.70 E-value=3.9e-16 Score=169.26 Aligned_cols=159 Identities=9% Similarity=0.048 Sum_probs=131.6
Q ss_pred CceeeccCCCccceecccCCCCCC-cEEEEEcCCcEEEEEccCCce----ecCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRVKADLNQGDL----LNSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dl~~~~~----~~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
+...+.+|...+..+.| ++ ++ .+.+.+.+....+|++.++.. .+|...|.+++|+|++ +|++++.|+.|++
T Consensus 239 ~~~~~~~~~~~i~~~~~-~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i 314 (425)
T 1r5m_A 239 PTGKLIGHHGPISVLEF-ND--TNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRL 314 (425)
T ss_dssp CSEEECCCSSCEEEEEE-ET--TTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEE
T ss_pred eeeeeccCCCceEEEEE-CC--CCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEE
Confidence 44567788888888988 33 44 344444444445599887653 3589999999999999 9999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc--------------------EEE
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ--------------------VLT 654 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~--------------------~~~ 654 (712)
||+++. ........|...|++++|+| ++.+|++|+.||.|++||++++. ++.
T Consensus 315 ~d~~~~-------~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (425)
T 1r5m_A 315 WSLKQN-------TLLALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYA 386 (425)
T ss_dssp EETTTT-------EEEEEEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEE
T ss_pred EECCCC-------cEeEecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhh
Confidence 999752 22334456889999999999 59999999999999999999888 899
Q ss_pred EeccCCC--cEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 655 EMREHER--RVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 655 ~~~~H~~--~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
.+.+|.. .|++++|+| ++.+|++|+.|+.|++||+.
T Consensus 387 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 387 SYQSSQDNDYIFDLSWNC-AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EECCTTCCCCEEEEEECT-TSSEEEEEESSSCCEEEECC
T ss_pred hhcCcccCCceEEEEccC-CCceEEEEecCceEEEEeec
Confidence 9999977 999999998 89999999999999999986
No 364
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.68 E-value=1.5e-16 Score=173.15 Aligned_cols=178 Identities=11% Similarity=0.043 Sum_probs=117.3
Q ss_pred eeeccCCCccceecccCCC------CCCcEEEEEcCCcE-EEEEccCCc----eecCCCCeeEEEEcCCC-CEEEEEeCC
Q 005147 522 LGSKEGYSEGRRSGWINPF------LEGLCKYLSFSKLR-VKADLNQGD----LLNSSNLVCSLSFDRDG-ELFAAAGVN 589 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~------~~~~~~~~~~~~~~-v~~dl~~~~----~~~h~~~V~~i~f~~~~-~~lat~~~d 589 (712)
..+.||.+.|..++| +|. .|+.+.+...++.. .+||+.++. +.+|.+.|.+++|+|++ .+|++|+.|
T Consensus 130 ~~~~gH~~~v~~v~~-~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDI-ADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp CTTTSCSSCEEEEEE-EEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred cccCCCCCceEEEEE-ccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 457899999999999 442 24444444444444 459998654 34789999999999987 489999999
Q ss_pred CcEEEEEcCCccccCccc------------------ccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCc
Q 005147 590 KKIKVFECDAIINENRDI------------------HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ 651 (712)
Q Consensus 590 ~~I~iwD~~~~~~~~~~~------------------~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~ 651 (712)
++|++||+++........ .......+|...+.++.|++.++..|++++.|++|++||+.+++
T Consensus 209 ~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 209 GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 999999998743211100 00112246788899999986689999999999999999999988
Q ss_pred EEEEeccCCCcEEEEEEec-------------------CCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 652 VLTEMREHERRVWSIDFSS-------------------ADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 652 ~~~~~~~H~~~v~sv~fsp-------------------~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
....+..|...++.+.+.| .++.++++|+.|++|+|||+.++..+..+.
T Consensus 289 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~ 356 (393)
T 4gq1_A 289 DYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI 356 (393)
T ss_dssp ---------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE
T ss_pred CCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec
Confidence 8888877777766665543 134478889999999999999998877655
No 365
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.68 E-value=3.8e-15 Score=154.69 Aligned_cols=161 Identities=15% Similarity=0.188 Sum_probs=131.7
Q ss_pred CCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 005147 519 INNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKV 594 (712)
Q Consensus 519 ~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~i 594 (712)
.+...++||.+.+..+.| ..+..+...+.+....+|++.++... .|...|.+++|+|++.+|++|+.|+.|++
T Consensus 9 ~~~~~l~~h~~~v~~~~~---~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA---VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp EEEEEECCCSSCEEEEEE---EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHhhCCCCCcEEEEe---cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 345678999999999988 23445554444444445999876533 68999999999999999999999999999
Q ss_pred EEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC
Q 005147 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (712)
Q Consensus 595 wD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~ 674 (712)
||+..... .........|...|.+++|+ +++|++|+.||.|++|| .++.+..+..|...|++++|+|.++.
T Consensus 86 ~~~~~~~~----~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~ 156 (313)
T 3odt_A 86 VPLFATSG----EDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSEN 156 (313)
T ss_dssp EETTCCTT----SCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTT
T ss_pred EEeeecCC----CCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCC
Confidence 99975321 12233456789999999994 57999999999999999 78889999999999999999988899
Q ss_pred EEEEEECCCcEEEEeCC
Q 005147 675 LLASGSDDGSVKLWSIN 691 (712)
Q Consensus 675 ~l~sgs~D~~v~lWd~~ 691 (712)
++++|+.|+.|++||..
T Consensus 157 ~l~~~~~d~~i~i~d~~ 173 (313)
T 3odt_A 157 KFLTASADKTIKLWQND 173 (313)
T ss_dssp EEEEEETTSCEEEEETT
T ss_pred EEEEEECCCCEEEEecC
Confidence 99999999999999943
No 366
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.67 E-value=3.9e-16 Score=164.73 Aligned_cols=154 Identities=10% Similarity=0.103 Sum_probs=123.4
Q ss_pred ccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCc-------eecCCCCeeEEEEcCCCC-EEEEEeCCCcEEEE
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGD-------LLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVF 595 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~-------~~~h~~~V~~i~f~~~~~-~lat~~~d~~I~iw 595 (712)
.+|.+.+..+.| ++ ++...++...++.+ +|++..+. ..+|...|.+++|+|+++ +|++|+.|+.|++|
T Consensus 8 ~~h~~~v~~~~~-s~--~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 8 QAPKDYISDIKI-IP--SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp SCCSSCEEEEEE-EG--GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred cCCCCcEEEEEE-cC--CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 467777777877 33 33333333333443 48877654 236899999999999999 99999999999999
Q ss_pred Ec-CCccccCcccccceEEec--CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC---------CcEEEEeccCCCcE
Q 005147 596 EC-DAIINENRDIHYPVVEMA--SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR---------SQVLTEMREHERRV 663 (712)
Q Consensus 596 D~-~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~---------~~~~~~~~~H~~~v 663 (712)
|+ .+.. .....+ |...|.+++|+| +++|++++.||.|++||+++ ++++.++. |...|
T Consensus 85 d~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v 153 (342)
T 1yfq_A 85 DLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKI 153 (342)
T ss_dssp CSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCE
T ss_pred EeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCce
Confidence 99 6531 234456 899999999999 88999999999999999998 77777777 99999
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCCC-CcE
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSINQ-AIL 695 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~~-~~~ 695 (712)
++++|+| ++ +++|+.|+.|++||+++ +..
T Consensus 154 ~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 154 FTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp EEEEECS-SE--EEEEESTTEEEEEESSCCTTC
T ss_pred EEEEecC-Cc--EEEEeCCCeEEEEECCccccc
Confidence 9999997 44 99999999999999998 553
No 367
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.67 E-value=2e-15 Score=166.20 Aligned_cols=183 Identities=18% Similarity=0.260 Sum_probs=144.1
Q ss_pred CCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCC
Q 005147 491 PSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG 562 (712)
Q Consensus 491 ~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~ 562 (712)
.+|...+++..| ||..+++...+. .......+.+|...+..+.| + ++.+...+.+....+|++.++
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~-~---~~~l~s~s~dg~i~vwd~~~~ 243 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF-N---NGMMVTCSKDRSIAVWDMASP 243 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC-C---TTEEEEEETTSCEEEEECSSS
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE-c---CCEEEEeeCCCcEEEEeCCCC
Confidence 456667777776 554432222221 12345678899999999998 2 456666666555566999865
Q ss_pred c-------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEE
Q 005147 563 D-------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 563 ~-------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~las 635 (712)
. +.+|...|.+++| ++++|++|+.|+.|++||+++. .......+|...|.+++|+ ++++++
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~---~~~l~~ 311 (435)
T 1p22_A 244 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC-------EFVRTLNGHKRGIACLQYR---DRLVVS 311 (435)
T ss_dssp SCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC-------CEEEEEECCSSCEEEEEEE---TTEEEE
T ss_pred CCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC-------cEEEEEcCCCCcEEEEEeC---CCEEEE
Confidence 4 2368999999999 7889999999999999999763 2223445788999999995 579999
Q ss_pred EeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 636 SNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 636 gs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
|+.||.|++||+++++++.++.+|...|++++| ++.+|++|+.||.|++||++++.
T Consensus 312 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 312 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHT
T ss_pred EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCC
Confidence 999999999999999999999999999999998 57899999999999999997665
No 368
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.67 E-value=5.9e-16 Score=170.77 Aligned_cols=131 Identities=17% Similarity=0.192 Sum_probs=107.6
Q ss_pred cCCCCeeEEEEcCCCCEEE----EEeCCCcEEEEEcCCccccCccc----ccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 566 NSSNLVCSLSFDRDGELFA----AAGVNKKIKVFECDAIINENRDI----HYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~la----t~~~d~~I~iwD~~~~~~~~~~~----~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
.+.+.|.+++|+|++++|| +|+.|+.|+|||+++........ .......+|...|.+|+|+|..+++||+|+
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4567899999999999999 78899999999997631111000 011223458899999999996689999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLH 698 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~ 698 (712)
.||+|+|||++++..+....+|...|++++|+| ++++|++|+.|++|++||++ ++....
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~ 228 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKV 228 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-Cccccc
Confidence 999999999999988877888999999999998 89999999999999999998 554433
No 369
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.66 E-value=6.7e-15 Score=162.25 Aligned_cols=191 Identities=15% Similarity=0.201 Sum_probs=147.7
Q ss_pred CCCCCCcccccccCCCCCCCCccccCC--------CCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
+.+|...+.. .++++|..++....+. .......+.+|.+.+..+.| + +..+...+.+....+|++.+
T Consensus 114 l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~-~---~~~l~s~~~dg~i~vwd~~~ 188 (445)
T 2ovr_B 114 LKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM-R---DNIIISGSTDRTLKVWNAET 188 (445)
T ss_dssp EECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEE-E---TTEEEEEETTSCEEEEETTT
T ss_pred ecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEe-c---CCEEEEEeCCCeEEEEECCc
Confidence 5577765432 2455666543332221 22345678899999998888 2 44555555555555599887
Q ss_pred Ccee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
++.. +|...|.++.|+ ++.+++|+.|++|++||+++. .......+|...|.+++| +++++++|+
T Consensus 189 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~-------~~~~~~~~~~~~v~~~~~---~~~~l~~~~ 256 (445)
T 2ovr_B 189 GECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG-------QCLHVLMGHVAAVRCVQY---DGRRVVSGA 256 (445)
T ss_dssp TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC-------CEEEEEECCSSCEEEEEE---CSSCEEEEE
T ss_pred CcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC-------cEEEEEcCCcccEEEEEE---CCCEEEEEc
Confidence 7643 689999999995 678999999999999999752 223345678999999999 367999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.||.|++||+++++++.++.+|...|++++| ++.++++|+.|+.|++||+++++.+..+.
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 316 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLT 316 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEc
Confidence 9999999999999999999999999999999 57899999999999999999998886653
No 370
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.66 E-value=2.4e-15 Score=161.08 Aligned_cols=170 Identities=9% Similarity=0.107 Sum_probs=124.9
Q ss_pred CceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccCCceec--CCCCeeEEEEcCCCCEE-EEEeCCCcEEEEE
Q 005147 520 NNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLN--SSNLVCSLSFDRDGELF-AAAGVNKKIKVFE 596 (712)
Q Consensus 520 ~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~--h~~~V~~i~f~~~~~~l-at~~~d~~I~iwD 596 (712)
|...+.+|.+.+..+.| +.+|.+.+...+++..+|++..+.... +...+..++|.++++.+ ++++.|++|+|||
T Consensus 11 ~~~~~~~h~~~V~~v~f---s~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEF---NQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp --------CCCCCEEEE---CTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred CccccccCCCceEEEEE---CCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 33456899999999999 567776666666666679988766442 33468889999988877 5677889999999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCC----------------C------------------CEEEE--EeCCC
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYI----------------K------------------SQIAS--SNFEG 640 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~----------------~------------------~~las--gs~Dg 640 (712)
..++. .+....+...|.+++|++.. + .++|. |+.||
T Consensus 88 ~~~~~--------~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g 159 (355)
T 3vu4_A 88 DVKKQ--------DVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLG 159 (355)
T ss_dssp TTTTE--------EEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTT
T ss_pred CCCCc--------EEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCc
Confidence 97631 23344456677777776520 1 34555 57899
Q ss_pred cEEEEECCCCc---------------E-EEEeccCCCcEEEEEEecCCCCEEEEEECCCc-EEEEeCCCCcEEEEEec
Q 005147 641 VVQVWDVSRSQ---------------V-LTEMREHERRVWSIDFSSADPTLLASGSDDGS-VKLWSINQAILLLHLVD 701 (712)
Q Consensus 641 ~V~lwD~~~~~---------------~-~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~-v~lWd~~~~~~v~~~~~ 701 (712)
.|++||++++. + +.++.+|...|++++|+| ++.+|||||.|++ |+|||+++++++.++..
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~ 236 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRR 236 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 99999999865 2 788999999999999998 9999999999999 99999999999987763
No 371
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.65 E-value=9.2e-15 Score=160.11 Aligned_cols=149 Identities=17% Similarity=0.334 Sum_probs=123.8
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~ 605 (712)
.-++| + ..+++++. .++...+|+..+|++. +|...|++|+|+|+|++||+|+.|++|+|||+.+.
T Consensus 109 ~~l~w-S--~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~----- 179 (420)
T 4gga_A 109 NLVDW-S--SGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ----- 179 (420)
T ss_dssp BCEEE-C--TTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----
T ss_pred eeEEE-C--CCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC-----
Confidence 34778 3 45665554 4555555999887643 57889999999999999999999999999999763
Q ss_pred ccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCc
Q 005147 606 DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDDGS 684 (712)
Q Consensus 606 ~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~ 684 (712)
.......+|...+.+++|++ .+|++|+.|+.+.+||.+.. ..+.++.+|...+..+.|+| ++.++++++.|+.
T Consensus 180 --~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~ 253 (420)
T 4gga_A 180 --KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNL 253 (420)
T ss_dssp --EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred --cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC-CCCeeeeeecccc
Confidence 22344567899999999975 69999999999999999875 56788999999999999998 9999999999999
Q ss_pred EEEEeCCCCcE
Q 005147 685 VKLWSINQAIL 695 (712)
Q Consensus 685 v~lWd~~~~~~ 695 (712)
|++||+.+++.
T Consensus 254 v~i~~~~~~~~ 264 (420)
T 4gga_A 254 VNVWPSAPGEG 264 (420)
T ss_dssp EEEEESSCCSS
T ss_pred ceEEeeccccc
Confidence 99999987753
No 372
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.64 E-value=7.4e-15 Score=153.74 Aligned_cols=149 Identities=11% Similarity=0.023 Sum_probs=108.7
Q ss_pred CCCcEEEEEc--CCcEEE-EEcc-CCce----ecCCCCeeEEEEcC---CCCEEEEEeCCCcEEEEEcCCccccCccccc
Q 005147 541 LEGLCKYLSF--SKLRVK-ADLN-QGDL----LNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHY 609 (712)
Q Consensus 541 ~~~~~~~~~~--~~~~v~-~dl~-~~~~----~~h~~~V~~i~f~~---~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~ 609 (712)
.++.+...+. .+..|. |++. .|+. .+|...|..++|++ ++++||+||.|++|||||+.++..
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~------- 215 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL------- 215 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE-------
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE-------
Confidence 3455544433 234444 7773 3543 36899999999999 779999999999999999987432
Q ss_pred ceEEecC---CCCeEEEEEcCCCCCEE------------EEEeCCCcEEEEECCCCcEEEEe-----ccCCCcEEEEEEe
Q 005147 610 PVVEMAS---RSKLSSICWNSYIKSQI------------ASSNFEGVVQVWDVSRSQVLTEM-----REHERRVWSIDFS 669 (712)
Q Consensus 610 ~~~~~~~---~~~v~~v~~~p~~~~~l------------asgs~Dg~V~lwD~~~~~~~~~~-----~~H~~~v~sv~fs 669 (712)
.....+| ...+.+++|+| ++.++ +||+.|++|++||..+++.+.++ .+|...+.+.+++
T Consensus 216 l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s 294 (356)
T 2w18_A 216 LKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK 294 (356)
T ss_dssp EEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE
T ss_pred EEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC
Confidence 1122222 34677889999 57665 77899999999999999988776 4787776666654
Q ss_pred cCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 670 SADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.++|+||.|++|+|||+.+++++.++-
T Consensus 295 ---g~~lASgS~DgTIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 295 ---DHCAAAILTSGTIAIWDLLLGQCTALLP 322 (356)
T ss_dssp ---TTEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred ---CCEEEEEcCCCcEEEEECCCCcEEEEec
Confidence 7899999999999999999999987653
No 373
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.63 E-value=1.7e-17 Score=187.72 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=75.0
Q ss_pred eccceeeccCCCCCcccccccccccccccCceEEEEeeC-CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCce
Q 005147 26 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWG-DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (712)
Q Consensus 26 ~~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~-g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIv 104 (712)
.+|..+|+.++||||+.+.. ++ ......+++||+. |++|.+++.. ++.|+.||+.||+|||++||+
T Consensus 387 ~~E~~il~~l~h~nIv~~~~-~~---~~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIi 453 (540)
T 3en9_A 387 AREARYLALVKDFGIPAPYI-FD---VDLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVI 453 (540)
T ss_dssp HHHHHHHHHGGGGTCCCCCE-EE---EETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCcCceEE-EE---EeCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCc
Confidence 45667888999999994333 11 1233457777774 8999999954 568999999999999999999
Q ss_pred eccCCCCceeecCCCcEEEEecccccCC
Q 005147 105 VHNVRPSCFVMSSFNHVSFIESASCSDS 132 (712)
Q Consensus 105 HrDLkP~NIll~~~~~vkl~dfg~~~~~ 132 (712)
||||||+|||++. .+||+|||+++..
T Consensus 454 HrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 454 HNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp CTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred cCCCCHHHEEECC--eEEEEECccCEEC
Confidence 9999999999988 9999999998654
No 374
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.63 E-value=1.3e-14 Score=151.15 Aligned_cols=148 Identities=16% Similarity=0.322 Sum_probs=122.1
Q ss_pred eecccCCCCCCcEEEEEcCCcEEEEEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcc
Q 005147 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD 606 (712)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~ 606 (712)
.++| +.++++++. .++...+||+.++++. +|...|++++|+|++++||+|+.|++|++||++++
T Consensus 30 ~l~W---S~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~------ 99 (318)
T 4ggc_A 30 LVDW---SSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ------ 99 (318)
T ss_dssp CEEE---CTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT------
T ss_pred EEEE---CCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc------
Confidence 4678 345665554 4544445999887643 57889999999999999999999999999999763
Q ss_pred cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCC-cEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcE
Q 005147 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSV 685 (712)
Q Consensus 607 ~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~-~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v 685 (712)
.......+|...+.++++. +..+++|+.++.+.+|+..+. ..+..+.+|...+.++.|++ ++.+|++|+.|++|
T Consensus 100 -~~~~~~~~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 100 -KRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLV 174 (318)
T ss_dssp -EEEEEEECCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred -eeEEEecCccceEEEeecC---CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcce
Confidence 2233456788888887776 469999999999999999876 56788999999999999997 89999999999999
Q ss_pred EEEeCCCCcE
Q 005147 686 KLWSINQAIL 695 (712)
Q Consensus 686 ~lWd~~~~~~ 695 (712)
++||+++++.
T Consensus 175 ~iwd~~~~~~ 184 (318)
T 4ggc_A 175 NVWPSAPGEG 184 (318)
T ss_dssp EEEESSCBTT
T ss_pred eEEECCCCcc
Confidence 9999998764
No 375
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.62 E-value=4e-14 Score=155.98 Aligned_cols=189 Identities=19% Similarity=0.256 Sum_probs=145.5
Q ss_pred CCCCCCcccccccCCCCCCCCccccC--------CCCCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC
Q 005147 490 KPSGRPLVRHSQLSSDGRTSKPLVNE--------RSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ 561 (712)
Q Consensus 490 ~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~ 561 (712)
+.+|...+.+..+++ ..+.....+ ....+...+.+|...+..+.| ....+.+.+.+....+|++++
T Consensus 195 ~~~h~~~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 195 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp ECCCSSCEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE----CSSCEEEEETTSCEEEEEGGG
T ss_pred ECCCCCcEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE----CCCEEEEEcCCCEEEEEECCC
Confidence 345666677766642 222111111 112345677899999988888 334555555555555599887
Q ss_pred Ccee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 562 GDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 562 ~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
+... +|...|.++.| ++.++++|+.|+.|++||+++. .......+|...+.+++++ +++|++|+
T Consensus 269 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~---~~~l~~~~ 336 (445)
T 2ovr_B 269 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG-------NCIHTLTGHQSLTSGMELK---DNILVSGN 336 (445)
T ss_dssp TEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC-------CEEEEECCCCSCEEEEEEE---TTEEEEEE
T ss_pred CcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC-------CEEEEEcCCcccEEEEEEe---CCEEEEEe
Confidence 7643 68999999999 7899999999999999999763 2223445788889999886 46999999
Q ss_pred CCCcEEEEECCCCcEEEEecc---CCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMRE---HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~---H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
.||.|++||+++++++.++.. |...|++++|+ +.+|++|+.||.|++||+++++.+..+
T Consensus 337 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 337 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC---CCEEEEEeCCCeEEEEECCCCceeeee
Confidence 999999999999999999986 88999999996 589999999999999999999988877
No 376
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.57 E-value=1.7e-14 Score=159.14 Aligned_cols=118 Identities=15% Similarity=0.237 Sum_probs=95.9
Q ss_pred cCCCCeeEEEEcCC-CCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEE
Q 005147 566 NSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (712)
Q Consensus 566 ~h~~~V~~i~f~~~-~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~l 644 (712)
+|...|.+++|+|+ +++||+|+.|++|++||+++. .......+|...|++++|+| ++++|++|+.||+|++
T Consensus 147 ~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-------~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~i 218 (434)
T 2oit_A 147 DAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-------VKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQ 218 (434)
T ss_dssp SGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-------EEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEE
T ss_pred CCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-------cceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEE
Confidence 58999999999997 889999999999999999763 12234556888999999999 5999999999999999
Q ss_pred EECCCCcEEEEeccCC-------CcEEEEEEecCCCCEEEE-EECCCc------EEEEeCCCC
Q 005147 645 WDVSRSQVLTEMREHE-------RRVWSIDFSSADPTLLAS-GSDDGS------VKLWSINQA 693 (712)
Q Consensus 645 wD~~~~~~~~~~~~H~-------~~v~sv~fsp~~~~~l~s-gs~D~~------v~lWd~~~~ 693 (712)
||++ ++...++..|. ..|.+++|++ ++.++++ ++.||. +++|+++..
T Consensus 219 wd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 219 YLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EccC-CcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999 66666665443 3899999998 6666544 445543 899999865
No 377
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.54 E-value=4.9e-13 Score=144.04 Aligned_cols=190 Identities=12% Similarity=0.027 Sum_probs=138.8
Q ss_pred cccccccCCCCCCCCccccC-C--------CCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccCCce
Q 005147 496 LVRHSQLSSDGRTSKPLVNE-R--------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDL 564 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~-~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~ 564 (712)
.+.+..|+|||..+.+.... . .......+.. ...+.++.| ..++. +.+....++.+. |++.+++.
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~---s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLAL---SPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEE---CTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEE---CCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 67889999999865222211 1 1111222333 345677888 34443 435555556655 99988765
Q ss_pred e---cCCCCeeEEEEcCCCCEE-EEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe---
Q 005147 565 L---NSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--- 637 (712)
Q Consensus 565 ~---~h~~~V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs--- 637 (712)
. .+...+.+++|+|+++.+ ++++.++.|++||+++. .......+...+.+++|+| ++.+|++++
T Consensus 151 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~~~-~g~~l~~~~~~~ 221 (391)
T 1l0q_A 151 INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN--------SVIDTVKVEAAPSGIAVNP-EGTKAYVTNVDK 221 (391)
T ss_dssp EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------EEEEEEECSSEEEEEEECT-TSSEEEEEEECS
T ss_pred EEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC--------eEEEEEecCCCccceEECC-CCCEEEEEecCc
Confidence 4 235677999999999876 67788999999999762 2233445667899999999 588888877
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE-EEEECCCcEEEEeCCCCcEEEEEe
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL-ASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l-~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.++.|.+||+.+++.+..+..|. .+.+++|+| ++.++ ++++.|+.|++||+.+++.+..+.
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTP-DGKKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEECCS-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCcEEEEECCCCeEEEEEecCC-CccEEEEcc-CCCEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 79999999999999999988765 578999998 77765 788899999999999998877654
No 378
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.50 E-value=1.6e-12 Score=140.05 Aligned_cols=190 Identities=10% Similarity=0.057 Sum_probs=137.5
Q ss_pred cccccccCCCCCCCCccc-cCC--------CCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccCCce
Q 005147 496 LVRHSQLSSDGRTSKPLV-NER--------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDL 564 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~-~~~--------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~ 564 (712)
.++++.|++||..+.+.. .+. .......+..|. .+.++.| ..++. +.+....++.+. |++.+++.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~---spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAV---SPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEE---CTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEE---CCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 367889999998652111 111 111222333333 6778888 33444 445555555555 99988765
Q ss_pred e---cCCCCeeEEEEcCCCCEE-EEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEE-EEEeCC
Q 005147 565 L---NSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFE 639 (712)
Q Consensus 565 ~---~h~~~V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-asgs~D 639 (712)
. .+...+.+++|+|+++.+ ++++.|+.|++||+.+.. ..........+.+++|+|. +..| ++++.|
T Consensus 109 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~~d-g~~l~~~~~~~ 179 (391)
T 1l0q_A 109 AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA--------VINTVSVGRSPKGIAVTPD-GTKVYVANFDS 179 (391)
T ss_dssp EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--------EEEEEECCSSEEEEEECTT-SSEEEEEETTT
T ss_pred EEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------EEEEEecCCCcceEEECCC-CCEEEEEeCCC
Confidence 4 356678999999999976 788889999999997521 2233344567899999995 6655 788899
Q ss_pred CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE---CCCcEEEEeCCCCcEEEEEe
Q 005147 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS---DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 640 g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs---~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.|.+||+++++.+..+. |...+.+++|+| ++.++++++ .|+.|++||+++++.+..+-
T Consensus 180 ~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~ 241 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVK-VEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241 (391)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEe-cCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEe
Confidence 999999999999887776 567899999998 888888887 79999999999988776554
No 379
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.49 E-value=3.4e-13 Score=147.43 Aligned_cols=154 Identities=12% Similarity=0.155 Sum_probs=118.0
Q ss_pred eecccCCCCCCcEEEEEcCCcEE-EEEccCCce---------ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccc
Q 005147 533 RSGWINPFLEGLCKYLSFSKLRV-KADLNQGDL---------LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN 602 (712)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~~---------~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~ 602 (712)
.+.| ++ ++.+.+....++.+ +|++.+++. .+|.+.|.+++|++++.++++++.|+.|++||+++..
T Consensus 127 ~~~~-s~--~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~- 202 (433)
T 3bws_A 127 SVRF-ID--NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA- 202 (433)
T ss_dssp CCEE-SS--SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC-
T ss_pred EEEE-eC--CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce-
Confidence 5555 33 44444444444433 366665543 3678899999999999999999999999999997521
Q ss_pred cCcccccceEEecCCCCeEEEEEcCCCCCEE-EEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE-
Q 005147 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS- 680 (712)
Q Consensus 603 ~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-asgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs- 680 (712)
.......|...+.+++|+|. +..+ ++++.|+.|.+||+++++.+..+..+ ..+.+++|+| ++.++++++
T Consensus 203 ------~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~ 273 (433)
T 3bws_A 203 ------YKATVDLTGKWSKILLYDPI-RDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK-DGKELYIAQF 273 (433)
T ss_dssp ------EEEEEECSSSSEEEEEEETT-TTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT-TSSEEEEEEE
T ss_pred ------EEEEEcCCCCCeeEEEEcCC-CCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC-CCCEEEEEEC
Confidence 12233467889999999995 6666 56668999999999999998888764 5699999998 888888888
Q ss_pred -------CCCcEEEEeCCCCcEEEEE
Q 005147 681 -------DDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 681 -------~D~~v~lWd~~~~~~v~~~ 699 (712)
.|+.|++||+++++.+..+
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~ 299 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTI 299 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeec
Confidence 5899999999998776554
No 380
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.48 E-value=9.4e-13 Score=143.86 Aligned_cols=196 Identities=10% Similarity=0.015 Sum_probs=143.9
Q ss_pred CCCCcccccccCCCCCCCCccccC--------CCCCCceeeccCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccC
Q 005147 492 SGRPLVRHSQLSSDGRTSKPLVNE--------RSSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQ 561 (712)
Q Consensus 492 ~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~ 561 (712)
++...+.+..|+++|..+.....+ ........+.+|...+..+.| ..++. +.+....++.+. |++++
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLY---DPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEE---ETTTTEEEEEETTTTEEEEEETTT
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEE---cCCCCEEEEEecCCCcEEEEECCC
Confidence 455567778888877644222111 112234456688888888888 33443 434554555555 99988
Q ss_pred Ccee---cCCCCeeEEEEcCCCCEEEEEe--------CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCC
Q 005147 562 GDLL---NSSNLVCSLSFDRDGELFAAAG--------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630 (712)
Q Consensus 562 ~~~~---~h~~~V~~i~f~~~~~~lat~~--------~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 630 (712)
++.. .+...+.+++|+|+++++++++ .|+.|++||+++. .......+...+.+++|+|...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 244 KLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--------KLIDTIGPPGNKRHIVSGNTEN 315 (433)
T ss_dssp TEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--------EEEEEEEEEECEEEEEECSSTT
T ss_pred CcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--------cEEeeccCCCCcceEEECCCCC
Confidence 7654 3456699999999999999988 4889999999753 1233345556889999999533
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEEC---------------CCcEEEEeCCCCcE
Q 005147 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD---------------DGSVKLWSINQAIL 695 (712)
Q Consensus 631 ~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~---------------D~~v~lWd~~~~~~ 695 (712)
.++++++.|+.|.+||+.+++.+..+. |...+.+++|+| ++.++++++. ||.|++||+.+++.
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 467788999999999999999888876 778899999998 8888888876 57999999999888
Q ss_pred EEEEe
Q 005147 696 LLHLV 700 (712)
Q Consensus 696 v~~~~ 700 (712)
+..+-
T Consensus 394 ~~~~~ 398 (433)
T 3bws_A 394 KEFWE 398 (433)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 76654
No 381
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.44 E-value=4.5e-12 Score=138.77 Aligned_cols=191 Identities=12% Similarity=0.028 Sum_probs=136.6
Q ss_pred CCCcccccccCCCCCCCCccccCC----------CCCCceeeccCCCccceecccCCCCCCc-EEEEEc-C-CcEEE-EE
Q 005147 493 GRPLVRHSQLSSDGRTSKPLVNER----------SSINNLGSKEGYSEGRRSGWINPFLEGL-CKYLSF-S-KLRVK-AD 558 (712)
Q Consensus 493 ~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~v~-~d 558 (712)
+...+.+..|||||+.++....+. .......+.+|.+.+..+.| +.+|. +.+... + ...+. |+
T Consensus 177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~---spdg~~la~~~~~~g~~~i~~~d 253 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF---SPDGSKLAFALSKTGSLNLYVMD 253 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEE---CTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEE---cCCCCEEEEEEecCCCceEEEEE
Confidence 345678899999999774443321 11223456778888888999 44565 333333 2 23344 89
Q ss_pred ccCCce---ecCCCCeeEEEEcCCCCEEEEEeC-CC--cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCE
Q 005147 559 LNQGDL---LNSSNLVCSLSFDRDGELFAAAGV-NK--KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 632 (712)
Q Consensus 559 l~~~~~---~~h~~~V~~i~f~~~~~~lat~~~-d~--~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~ 632 (712)
+.++.+ ..|...+.+++|+|||+.|++++. ++ .|.+||+.++. ......+...+.+++|+| ++++
T Consensus 254 ~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~sp-dG~~ 324 (415)
T 2hqs_A 254 LASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--------PQRITWEGSQNQDADVSS-DGKF 324 (415)
T ss_dssp TTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--------CEECCCSSSEEEEEEECT-TSSE
T ss_pred CCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC--------EEEEecCCCcccCeEECC-CCCE
Confidence 987754 367888999999999999888886 45 67777876521 122234556788999999 5888
Q ss_pred EEEEeCC---CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCC---cEEEEeCCCCcEEEEE
Q 005147 633 IASSNFE---GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG---SVKLWSINQAILLLHL 699 (712)
Q Consensus 633 lasgs~D---g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~---~v~lWd~~~~~~v~~~ 699 (712)
|++++.+ +.|.+||+.+++. ..+..|. .+.+++|+| ++.+|++++.|+ .|.+||+.. ..+..+
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d~~g-~~~~~l 393 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDG-RFKARL 393 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECT-TSSEEEEEEEETTEEEEEEEETTS-CCEEEC
T ss_pred EEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcC-CCCEEEEEEcCCCccEEEEEECCC-CcEEEe
Confidence 8888764 5899999999887 4566665 899999998 999999998877 799999974 444443
No 382
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.39 E-value=7.7e-14 Score=144.50 Aligned_cols=86 Identities=15% Similarity=0.053 Sum_probs=67.2
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCcee
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvH 105 (712)
++..+++.+. | +.++. ++.. ...+++||+ .|++|.+ +. ..+...++.||+.||.|||++||+|
T Consensus 153 ~E~~~l~~l~--~-~~v~~-~~~~----~~~~lvmE~~~g~~L~~-l~-------~~~~~~i~~qi~~~l~~lH~~giiH 216 (282)
T 1zar_A 153 NEFRALQKLQ--G-LAVPK-VYAW----EGNAVLMELIDAKELYR-VR-------VENPDEVLDMILEEVAKFYHRGIVH 216 (282)
T ss_dssp HHHHHHHHTT--T-SSSCC-EEEE----ETTEEEEECCCCEEGGG-CC-------CSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcc--C-CCcCe-EEec----cceEEEEEecCCCcHHH-cc-------hhhHHHHHHHHHHHHHHHHHCCCEe
Confidence 4555677776 4 55555 3322 345777777 5889998 52 2345679999999999999999999
Q ss_pred ccCCCCceeecCCCcEEEEecccc
Q 005147 106 HNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 106 rDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
|||||+|||++ ++.++|+|||++
T Consensus 217 rDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 217 GDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp SCCSTTSEEEE-TTEEEECCCTTC
T ss_pred CCCCHHHEEEE-CCcEEEEECCCC
Confidence 99999999999 999999999987
No 383
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.38 E-value=1.9e-11 Score=133.77 Aligned_cols=162 Identities=14% Similarity=0.132 Sum_probs=123.4
Q ss_pred ceeeccCCCccceecccCCCCCCc-EEEEEcCC--cEE-EEEccCCce---ecCCCCeeEEEEcCCCCEEE-EEeCCCc-
Q 005147 521 NLGSKEGYSEGRRSGWINPFLEGL-CKYLSFSK--LRV-KADLNQGDL---LNSSNLVCSLSFDRDGELFA-AAGVNKK- 591 (712)
Q Consensus 521 ~~~l~gh~~~~~~~~~~~~~~~~~-~~~~~~~~--~~v-~~dl~~~~~---~~h~~~V~~i~f~~~~~~la-t~~~d~~- 591 (712)
...+.+|...+..+.| +.+|. +.+.+.+. ..+ +|++.+++. ..|...+.+++|+|||+.|+ +++.++.
T Consensus 171 ~~~l~~~~~~v~~~~~---Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~ 247 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAW---SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSL 247 (415)
T ss_dssp CEEEEEESSCEEEEEE---CTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred CEEEeCCCCcceeeEE---cCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCc
Confidence 4677889999999999 44554 45555543 244 499988764 35788999999999999877 6666654
Q ss_pred -EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC-CC--cEEEEECCCCcEEEEeccCCCcEEEEE
Q 005147 592 -IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-EG--VVQVWDVSRSQVLTEMREHERRVWSID 667 (712)
Q Consensus 592 -I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~-Dg--~V~lwD~~~~~~~~~~~~H~~~v~sv~ 667 (712)
|++||+.+.. ......|...+.+++|+| ++++|++++. +| .|.+||+.+++. ..+..|...+.+++
T Consensus 248 ~i~~~d~~~~~--------~~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~ 317 (415)
T 2hqs_A 248 NLYVMDLASGQ--------IRQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDAD 317 (415)
T ss_dssp EEEEEETTTCC--------EEECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEE
T ss_pred eEEEEECCCCC--------EEeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeE
Confidence 9999987521 233446778899999999 5888887776 45 577779988764 45667888999999
Q ss_pred EecCCCCEEEEEECC---CcEEEEeCCCCcEE
Q 005147 668 FSSADPTLLASGSDD---GSVKLWSINQAILL 696 (712)
Q Consensus 668 fsp~~~~~l~sgs~D---~~v~lWd~~~~~~v 696 (712)
|+| ++++|++++.| ..|.+||+.+++..
T Consensus 318 ~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 318 VSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp ECT-TSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred ECC-CCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 998 99999888864 58999999988763
No 384
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.34 E-value=3.6e-11 Score=122.71 Aligned_cols=192 Identities=13% Similarity=0.050 Sum_probs=132.2
Q ss_pred CCcccccccCCCCCCCCccc--------cCCCCCCceeeccC-CCccceecccCCCCCCcEEEEEc-C---CcEEE-EEc
Q 005147 494 RPLVRHSQLSSDGRTSKPLV--------NERSSINNLGSKEG-YSEGRRSGWINPFLEGLCKYLSF-S---KLRVK-ADL 559 (712)
Q Consensus 494 ~~~~~~~~~~~~g~~~~~~~--------~~~~~~~~~~l~gh-~~~~~~~~~~~~~~~~~~~~~~~-~---~~~v~-~dl 559 (712)
...+.+..|+|||..++... .+....+.....+| ...+..+.| +.++...++.. + ...++ +++
T Consensus 41 ~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGI---SPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEE---CTTSSEEEEEECTTTSSCEEEEEET
T ss_pred CcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEE---CCCCCEEEEEEeCCCCcceEEEEEC
Confidence 44678899999999653321 11102233334455 356677888 34444333333 2 23444 555
Q ss_pred cCCce--ecCCCCeeEEEEcCCCCEEE-EEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 560 NQGDL--LNSSNLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 560 ~~~~~--~~h~~~V~~i~f~~~~~~la-t~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
..+.. +.+...+.+++|+|+++.|+ +++.++.++||+++... ........+...+.+++|+| ++.+|+.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~s~-dg~~l~~~ 190 (297)
T 2ojh_A 118 TGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS------GVETRLTHGEGRNDGPDYSP-DGRWIYFN 190 (297)
T ss_dssp TCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT------CCEEECCCSSSCEEEEEECT-TSSEEEEE
T ss_pred CCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCC------CcceEcccCCCccccceECC-CCCEEEEE
Confidence 55442 23445589999999999777 78889999999975311 11233445677899999999 57777665
Q ss_pred e-CCCcEEEEECC-CCcEEEEeccCCCcEEEEEEecCCCCEEEEEECC-----------CcEEEEeCCCCcEE
Q 005147 637 N-FEGVVQVWDVS-RSQVLTEMREHERRVWSIDFSSADPTLLASGSDD-----------GSVKLWSINQAILL 696 (712)
Q Consensus 637 s-~Dg~V~lwD~~-~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D-----------~~v~lWd~~~~~~v 696 (712)
+ .++.+.||++. .+..+..+..|...+.+++|+| ++.+|++++.| +.|.+||+.+++..
T Consensus 191 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 191 SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 5 69999999987 5667788888999999999998 99999888876 56999999987653
No 385
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.21 E-value=2.5e-10 Score=133.44 Aligned_cols=190 Identities=9% Similarity=0.015 Sum_probs=130.3
Q ss_pred cccccccCCCCCCCCccccCC--------CCCCceeeccCCC---ccceecccCCCCCCcEEEEEcCC---------cEE
Q 005147 496 LVRHSQLSSDGRTSKPLVNER--------SSINNLGSKEGYS---EGRRSGWINPFLEGLCKYLSFSK---------LRV 555 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~gh~~---~~~~~~~~~~~~~~~~~~~~~~~---------~~v 555 (712)
...++.|||||+.+.. ..+. .......+.+|.. .+..+.| +.||...+...++ ..+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~---SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI---SPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEE---CTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEE---CCCCCEEEEEecCccceeecceeeE
Confidence 3567899999996532 2121 1122344555654 3677788 5566644443331 344
Q ss_pred -EEEccCCce--e----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCC----------
Q 005147 556 -KADLNQGDL--L----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS---------- 618 (712)
Q Consensus 556 -~~dl~~~~~--~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~---------- 618 (712)
+|++.+++. + +|...|.+++|+|||+.||+++. +.|++||+.++... .....+..
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~-------~~~~~~~~~~~~~g~~~~ 165 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI-------RVVSTGKEGVIYNGLSDW 165 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE-------EEECCCBTTTEEEEECCH
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE-------EEecCCCCCceECcccce
Confidence 499988764 2 23445899999999999999886 79999999763211 11111111
Q ss_pred --------CeEEEEEcCCCCCEEEEEeCCC----------------------------------cEEEEECCCCcEEEEe
Q 005147 619 --------KLSSICWNSYIKSQIASSNFEG----------------------------------VVQVWDVSRSQVLTEM 656 (712)
Q Consensus 619 --------~v~~v~~~p~~~~~lasgs~Dg----------------------------------~V~lwD~~~~~~~~~~ 656 (712)
.+.+++|+| +++.||+++.|+ .|.+||+.+++....+
T Consensus 166 v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp HHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred eEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence 347899999 699999988653 7999999998876677
Q ss_pred ccC------CCcEEEEEEecCCCCEEEEEEC----CCcEEEEeCCCCcEEEEE
Q 005147 657 REH------ERRVWSIDFSSADPTLLASGSD----DGSVKLWSINQAILLLHL 699 (712)
Q Consensus 657 ~~H------~~~v~sv~fsp~~~~~l~sgs~----D~~v~lWd~~~~~~v~~~ 699 (712)
..| ...+.+++|+| ||+++++++. +..|.+||+.+++....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 245 MPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp CCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred eCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence 654 67899999998 9998877754 467999999998865443
No 386
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.20 E-value=2.1e-10 Score=134.72 Aligned_cols=161 Identities=11% Similarity=0.080 Sum_probs=112.6
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEE-EEccCC---c---eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG---D---LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 603 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~---~---~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~ 603 (712)
+..+.| +.||...+.... +.++ |++.++ . +..|...+.+++|+|||++||+++ ++.|++||+.++...
T Consensus 111 v~~~~~---SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 111 IVDYQW---SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp SCCCEE---CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred cceeEE---CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence 566777 556654444444 4544 999877 4 345778899999999999999987 569999999763211
Q ss_pred Cccc-ccceEEecC--------CCCeEEEEEcCCCCCEEEEEeCCC---------------------------------c
Q 005147 604 NRDI-HYPVVEMAS--------RSKLSSICWNSYIKSQIASSNFEG---------------------------------V 641 (712)
Q Consensus 604 ~~~~-~~~~~~~~~--------~~~v~~v~~~p~~~~~lasgs~Dg---------------------------------~ 641 (712)
.... .......++ ...+.+++|+| ++++|++++.|+ .
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 1000 000000000 01247899999 689999988776 7
Q ss_pred EEEEECCC-CcEEEEec--cCCCcEEEEEEecCCCCEEEEEEC-----CCcEEEEeCCCCcEEEEE
Q 005147 642 VQVWDVSR-SQVLTEMR--EHERRVWSIDFSSADPTLLASGSD-----DGSVKLWSINQAILLLHL 699 (712)
Q Consensus 642 V~lwD~~~-~~~~~~~~--~H~~~v~sv~fsp~~~~~l~sgs~-----D~~v~lWd~~~~~~v~~~ 699 (712)
|.+||+.+ ++...... .|...+.+++| | ||+.|+.++. +..|.+||+.+++....+
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 89999998 87655443 48889999999 9 9998887764 678999999998865443
No 387
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.19 E-value=4.8e-10 Score=114.27 Aligned_cols=166 Identities=14% Similarity=0.106 Sum_probs=118.2
Q ss_pred eeeccCCCccceecccCCCCCCcEEEEEcCCcEEEEEccC-Ccee----cC-CCCeeEEEEcCCCCEEEEEe--CCCcEE
Q 005147 522 LGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ-GDLL----NS-SNLVCSLSFDRDGELFAAAG--VNKKIK 593 (712)
Q Consensus 522 ~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~-~~~~----~h-~~~V~~i~f~~~~~~lat~~--~d~~I~ 593 (712)
..+.+|...+..+.| +.++...++..+....+|++.+ +... ++ ...|.+++|+|++++|++++ .++.++
T Consensus 35 ~~~~~~~~~v~~~~~---spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 35 RVVWQTPELFEAPNW---SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEEEESSCCEEEEE---CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE
T ss_pred eeeccCCcceEeeEE---CCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcce
Confidence 456678888999999 4556555555554444599988 6643 23 47789999999999999999 445677
Q ss_pred EEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEE-EEeCCCcEEEEECCC-CcEEEEeccCCCcEEEEEEecC
Q 005147 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVWDVSR-SQVLTEMREHERRVWSIDFSSA 671 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~la-sgs~Dg~V~lwD~~~-~~~~~~~~~H~~~v~sv~fsp~ 671 (712)
||+++... .......+...+.+++|+| +++.|+ +++.|+.+.||++.. +.....+..|...+.+++|+|
T Consensus 112 l~~~~~~~-------~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~- 182 (297)
T 2ojh_A 112 IYLLPSTG-------GTPRLMTKNLPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSP- 182 (297)
T ss_dssp EEEEETTC-------CCCEECCSSSSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECT-
T ss_pred EEEEECCC-------CceEEeecCCCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECC-
Confidence 77664311 1122333444589999999 477666 888999999999642 334567778889999999998
Q ss_pred CCCEEEEEE-CCCcEEEEeCC-CCcEEEEE
Q 005147 672 DPTLLASGS-DDGSVKLWSIN-QAILLLHL 699 (712)
Q Consensus 672 ~~~~l~sgs-~D~~v~lWd~~-~~~~v~~~ 699 (712)
++..|+.++ .|+.++||++. .+..+..+
T Consensus 183 dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 183 DGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred CCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 888777666 59999999986 44444443
No 388
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.18 E-value=2.9e-10 Score=139.12 Aligned_cols=186 Identities=15% Similarity=0.048 Sum_probs=139.1
Q ss_pred CcccccccC-CCCCCCCccccC------CCCCCceeeccCCC-ccceecccCCCCCCcEEEEEcCCcEE--EEEccCCc-
Q 005147 495 PLVRHSQLS-SDGRTSKPLVNE------RSSINNLGSKEGYS-EGRRSGWINPFLEGLCKYLSFSKLRV--KADLNQGD- 563 (712)
Q Consensus 495 ~~~~~~~~~-~~g~~~~~~~~~------~~~~~~~~l~gh~~-~~~~~~~~~~~~~~~~~~~~~~~~~v--~~dl~~~~- 563 (712)
..+.+..|| |||+.++..... ........+.+|.. .+....| + +|...++..+...+ +|++..+.
T Consensus 296 ~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---s-dg~~l~~~s~~~~l~~~~d~~~~~~ 371 (1045)
T 1k32_A 296 PSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGG---D-TKVAFIHGTREGDFLGIYDYRTGKA 371 (1045)
T ss_dssp GGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECS---S-SEEEEEEEETTEEEEEEEETTTCCE
T ss_pred cccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeE---c-CCCeEEEEECCCceEEEEECCCCCc
Confidence 357889999 999876433211 11123345667777 7778888 3 55433333334444 36776554
Q ss_pred --eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC-
Q 005147 564 --LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG- 640 (712)
Q Consensus 564 --~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg- 640 (712)
+.+|...+.+++|+|||++|++++.++.|++||+.++. .......|...+.+++|+| ++++|++++.++
T Consensus 372 ~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~-------~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~ 443 (1045)
T 1k32_A 372 EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK-------PTVIERSREAMITDFTISD-NSRFIAYGFPLKH 443 (1045)
T ss_dssp EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC-------EEEEEECSSSCCCCEEECT-TSCEEEEEEEECS
T ss_pred eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc-------eEEeccCCCCCccceEECC-CCCeEEEEecCcc
Confidence 33677889999999999999999999999999997631 1122336788899999999 689898887654
Q ss_pred ---------cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCc
Q 005147 641 ---------VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAI 694 (712)
Q Consensus 641 ---------~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~ 694 (712)
.|.+||+.+++ +..+..|...+.+++|+| ||+.|++++.++...+|+.....
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~~~~ 504 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVVLN 504 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECT-TSCEEEEEESCCCCCEECSSSSC
T ss_pred ccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcC-CCCEEEEEecccCCcCcchhccc
Confidence 89999999887 778888999999999998 99999999999999999876543
No 389
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.17 E-value=1.4e-09 Score=114.63 Aligned_cols=157 Identities=11% Similarity=0.078 Sum_probs=114.3
Q ss_pred cceecccCCCCCCc-EEEEEcCCcEEE-EEccCCceec----CCC---------CeeEEEEcCCCCEEEEEe--CCCcEE
Q 005147 531 GRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDLLN----SSN---------LVCSLSFDRDGELFAAAG--VNKKIK 593 (712)
Q Consensus 531 ~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~~~----h~~---------~V~~i~f~~~~~~lat~~--~d~~I~ 593 (712)
..++.| ..+|. +.+.+..+..+. |++.+++... +.. .+.++.|+|+++.+++++ .++.|.
T Consensus 91 ~~~~~~---s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 91 PFGATI---NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp CCSEEE---ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred cceEEE---CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 345555 34443 555555555554 8888776542 111 278899999999777665 478999
Q ss_pred EEEcCCccccCcccccceEEec-CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEecc----CCCcEEEEEE
Q 005147 594 VFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE----HERRVWSIDF 668 (712)
Q Consensus 594 iwD~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~----H~~~v~sv~f 668 (712)
+||..+.. ...... +...+.+++|+| +++.+++++.++.|.+||+.+++.+..+.. +...+.+++|
T Consensus 168 ~~d~~~~~--------~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 168 VVDGGNIK--------LKTAIQNTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp EEETTTTE--------EEEEECCCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE
T ss_pred EEcCCCCc--------eEEEecCCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE
Confidence 99997521 222333 455688999999 588999999999999999999998887764 5667899999
Q ss_pred ecCCCCEEEEEE-CCCcEEEEeCCCCcEEEEEe
Q 005147 669 SSADPTLLASGS-DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 669 sp~~~~~l~sgs-~D~~v~lWd~~~~~~v~~~~ 700 (712)
+| ++..++.++ .++.|.+||+.+++.+..+-
T Consensus 239 s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 239 DT-ARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp ET-TTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 98 777555554 56999999999998876654
No 390
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.13 E-value=6.2e-10 Score=126.05 Aligned_cols=164 Identities=11% Similarity=0.077 Sum_probs=120.2
Q ss_pred ccccccCCCCCCCCccccCCCCCCceeeccCCCccceecccCCCCCCcEEEEEc--CCcEEEEEccCCceecCCCCeeEE
Q 005147 497 VRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSF--SKLRVKADLNQGDLLNSSNLVCSL 574 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~~~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~dl~~~~~~~h~~~V~~i 574 (712)
++++.+||||+.+ +....++.+.+|+. .+++++..+. +...+.++
T Consensus 181 ~~~v~~spdg~~l---------------------------~v~~~d~~V~v~D~~~~t~~~~~~i~------~g~~p~~v 227 (543)
T 1nir_A 181 VHISRMSASGRYL---------------------------LVIGRDARIDMIDLWAKEPTKVAEIK------IGIEARSV 227 (543)
T ss_dssp EEEEEECTTSCEE---------------------------EEEETTSEEEEEETTSSSCEEEEEEE------CCSEEEEE
T ss_pred cceEEECCCCCEE---------------------------EEECCCCeEEEEECcCCCCcEEEEEe------cCCCcceE
Confidence 6677788888876 23334467777776 5666555443 34567899
Q ss_pred EEcC----CCCEEEEEe-CCCcEEEEEcCCccccCcccccceEEe---------cCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 575 SFDR----DGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEM---------ASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 575 ~f~~----~~~~lat~~-~d~~I~iwD~~~~~~~~~~~~~~~~~~---------~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
+|+| +|+++++++ .+++|.+||..+... ...+... .....+.++.++|+.+.++++...++
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~-----~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP-----KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTTCCE-----EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEecccccc-----ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 9999 999998888 589999999876321 1111110 12337899999997677888889999
Q ss_pred cEEEEECCCCcEEE--EeccCCCcEEEEEEecCCCCEEEE-EECCCcEEEEeCCCCcEEEEEe
Q 005147 641 VVQVWDVSRSQVLT--EMREHERRVWSIDFSSADPTLLAS-GSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 641 ~V~lwD~~~~~~~~--~~~~H~~~v~sv~fsp~~~~~l~s-gs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.|.+||+.+++.+. ++ .+...++++.|+| ++++|++ +..|++|.+||+.+++++..+-
T Consensus 303 ~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp EEEEEECTTSSSCEEEEE-ECCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred eEEEEEecCCCcceeEEe-ccCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 99999999876543 44 4677899999998 8886654 4569999999999998887654
No 391
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.13 E-value=1.1e-09 Score=124.02 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=108.9
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc--CCccccCcccccceEEecC
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC--DAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~--~~~~~~~~~~~~~~~~~~~ 616 (712)
...++.+.+|+..+++++..+.. ++. +.++.|+|||+++++++.|++|++||+ .+. ..+....+
T Consensus 155 ~~~d~~V~v~D~~t~~~~~~i~~----g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~~ 220 (543)
T 1nir_A 155 LRDAGQIALVDGDSKKIVKVIDT----GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIKI 220 (543)
T ss_dssp EGGGTEEEEEETTTCCEEEEEEC----STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEEC
T ss_pred EcCCCeEEEEECCCceEEEEEec----Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEec
Confidence 34445555555555444433332 222 889999999999999999999999999 442 12334445
Q ss_pred CCCeEEEEEcCC---CCCEEEEEeC-CCcEEEEECCCCcEEEEecc----------C-CCcEEEEEEecCCCCEEEEEEC
Q 005147 617 RSKLSSICWNSY---IKSQIASSNF-EGVVQVWDVSRSQVLTEMRE----------H-ERRVWSIDFSSADPTLLASGSD 681 (712)
Q Consensus 617 ~~~v~~v~~~p~---~~~~lasgs~-Dg~V~lwD~~~~~~~~~~~~----------H-~~~v~sv~fsp~~~~~l~sgs~ 681 (712)
...+..++|+|+ ++++++++++ +++|.+||..+++++.++.. | ..++.++.|+|..+.++++.+.
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 667899999992 4888888885 89999999999999988864 2 3389999999866678888889
Q ss_pred CCcEEEEeCCCCcEEE
Q 005147 682 DGSVKLWSINQAILLL 697 (712)
Q Consensus 682 D~~v~lWd~~~~~~v~ 697 (712)
|++|.+||+.+++.+.
T Consensus 301 ~g~i~vvd~~~~~~l~ 316 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLT 316 (543)
T ss_dssp TTEEEEEECTTSSSCE
T ss_pred CCeEEEEEecCCCcce
Confidence 9999999998866543
No 392
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.12 E-value=2.6e-10 Score=130.17 Aligned_cols=147 Identities=13% Similarity=-0.005 Sum_probs=115.7
Q ss_pred ecccCCCCCCcEEEEEcCCcEEEEEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcCCccccCcc
Q 005147 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRD 606 (712)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~~~~~~~~~ 606 (712)
..| ++..++.+.+....+...+|++.++.+. .+.. .++.|+|||++||+++.+ ..|++||+.++.
T Consensus 115 ~~~-s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~----- 186 (582)
T 3o4h_A 115 LSG-VDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG----- 186 (582)
T ss_dssp EEE-EECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC-----
T ss_pred eee-CCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-----
Confidence 355 4445555555555555567999887643 2333 899999999999988877 789999987532
Q ss_pred cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC--cEEEEECCCCcEEEEeccCCCcEEEEE--------EecCCCCEE
Q 005147 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVWDVSRSQVLTEMREHERRVWSID--------FSSADPTLL 676 (712)
Q Consensus 607 ~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg--~V~lwD~~~~~~~~~~~~H~~~v~sv~--------fsp~~~~~l 676 (712)
......+...+.+++|+| +++.|++++.+| .|.+||+.+++.. .+.+|...+.+++ |+| ||.++
T Consensus 187 ---~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~ 260 (582)
T 3o4h_A 187 ---LRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLP-DGRLA 260 (582)
T ss_dssp ---CEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECT-TSCEE
T ss_pred ---ceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcC-CCcEE
Confidence 223456777889999999 699999999999 8999999999888 8888988888888 998 88999
Q ss_pred EEEECCCcEEEEeCCCCcEE
Q 005147 677 ASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 677 ~sgs~D~~v~lWd~~~~~~v 696 (712)
++++.|++++||++ |+.+
T Consensus 261 ~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 261 VVARREGRSAVFID--GERV 278 (582)
T ss_dssp EEEEETTEEEEEET--TEEE
T ss_pred EEEEcCCcEEEEEE--CCee
Confidence 99999999999999 6544
No 393
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.11 E-value=2.3e-11 Score=124.16 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=71.6
Q ss_pred ccceeeccCCCCCcccccccccccccccCceEEEEeeCCc------cHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhh-
Q 005147 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDV------SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH- 99 (712)
Q Consensus 27 ~~~~~l~~~~H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~------sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lH- 99 (712)
++..+|..+.|+++... . .+. ....+++||+.|+ +|.+++.. .++.++..++.||+.+|.|||
T Consensus 119 ~E~~~l~~l~~~~i~~p-~-~~~----~~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~ 188 (258)
T 1zth_A 119 KEFRNLERAKEAGVSVP-Q-PYT----YMKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ 188 (258)
T ss_dssp HHHHHHHHHHHTTCCCC-C-EEE----EETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCC-e-EEE----cCCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH
Confidence 45556777878765211 1 111 1345788888642 78876522 346788999999999999999
Q ss_pred hcCceeccCCCCceeecCCCcEEEEecccccCCC
Q 005147 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (712)
Q Consensus 100 s~gIvHrDLkP~NIll~~~~~vkl~dfg~~~~~~ 133 (712)
++||+||||||+|||++. .++|+|||++....
T Consensus 189 ~~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 189 EAELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999999999999999987 89999999996553
No 394
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.11 E-value=1.4e-09 Score=113.66 Aligned_cols=79 Identities=13% Similarity=0.125 Sum_probs=67.4
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
..+.+++|+| ++++++++ ++.|.+||+.+++.+..+..+ ..+++++|+| +++++++++.|+.|.+||+.+++.+.
T Consensus 241 ~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 241 VFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp SCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred CceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECC-CCCEEEEEcCCCcEEEEECcCCcEEE
Confidence 4567899999 58888888 799999999999988887643 5678999998 89988888999999999999999887
Q ss_pred EEec
Q 005147 698 HLVD 701 (712)
Q Consensus 698 ~~~~ 701 (712)
.+-.
T Consensus 316 ~~~~ 319 (337)
T 1pby_B 316 QVDL 319 (337)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7643
No 395
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.09 E-value=3.8e-09 Score=110.58 Aligned_cols=191 Identities=9% Similarity=0.043 Sum_probs=117.4
Q ss_pred cccccccCCCCCCCCccccCCCCC------------CceeeccCCCccceecccCCCCCC-cEEEEEcCCcEE-EEEccC
Q 005147 496 LVRHSQLSSDGRTSKPLVNERSSI------------NNLGSKEGYSEGRRSGWINPFLEG-LCKYLSFSKLRV-KADLNQ 561 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~~~~------------~~~~l~gh~~~~~~~~~~~~~~~~-~~~~~~~~~~~v-~~dl~~ 561 (712)
.+.+..|+|||+.+.+.......+ ....+.++ ..+..+.| ..++ .+.+.+..++.+ +|++.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~---s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANI---SPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEE---CTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEE---CCCCCEEEEecCCCCEEEEEEecC
Confidence 456778899988652222111100 11112222 33556777 3444 355555344554 499886
Q ss_pred -Ccee--------c-CCCCeeEEEEcCCCCEEEEEe-CCCcEEEEEcCCccccCcccccceEEe----cCCCCeEEEEEc
Q 005147 562 -GDLL--------N-SSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEM----ASRSKLSSICWN 626 (712)
Q Consensus 562 -~~~~--------~-h~~~V~~i~f~~~~~~lat~~-~d~~I~iwD~~~~~~~~~~~~~~~~~~----~~~~~v~~v~~~ 626 (712)
+.+. . ....+.+++|+|+++++++++ .++.|.+||++.... ........... .....+.+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG-NIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS-CCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEeeccccCccccccCCccceEEC
Confidence 5432 1 345788999999999665554 889999999953110 00000111111 113457789999
Q ss_pred CCCCCEEE-EEeCCCcEEEEECC--C--CcEEEEeccCCCcEEEEEEecCCCCEEEEEE-CCCcEEEE--eCCCCc
Q 005147 627 SYIKSQIA-SSNFEGVVQVWDVS--R--SQVLTEMREHERRVWSIDFSSADPTLLASGS-DDGSVKLW--SINQAI 694 (712)
Q Consensus 627 p~~~~~la-sgs~Dg~V~lwD~~--~--~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs-~D~~v~lW--d~~~~~ 694 (712)
|. +++|+ ++..++.|.+||+. + .+.+..+..+.. +.+++|+| ++++|++++ .|+.|.+| |..+++
T Consensus 240 ~d-g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~-dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 240 PD-GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDH-SGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp TT-SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECT-TSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred CC-CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECC-CCCEEEEecCCCCeEEEEEEcCCCce
Confidence 94 66665 55689999999998 3 345656665555 88999998 888777777 68999999 555654
No 396
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.08 E-value=1.7e-09 Score=112.88 Aligned_cols=117 Identities=8% Similarity=0.156 Sum_probs=89.0
Q ss_pred CeeEEEEcCCCCEEEEEe------------CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe
Q 005147 570 LVCSLSFDRDGELFAAAG------------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 637 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~------------~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs 637 (712)
.+.+++|+|+++++++++ .++.|.+||+.+.. ..........+.+++|+| ++++|+++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--------~~~~~~~~~~~~~~~~s~-dg~~l~~~- 152 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--------RRKAFEAPRQITMLAWAR-DGSKLYGL- 152 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--------EEEEEECCSSCCCEEECT-TSSCEEEE-
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc--------EEEEEeCCCCcceeEECC-CCCEEEEe-
Confidence 577899999999888886 57999999996521 122233345678899999 57777777
Q ss_pred CCCcEEEEECCCCcEEEEeccCC---------------------------------------------------------
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHE--------------------------------------------------------- 660 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~--------------------------------------------------------- 660 (712)
++.|.+||+.+++.+..+..+.
T Consensus 153 -~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp -SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred -CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 6889999999887766554322
Q ss_pred ---------CcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 661 ---------RRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 661 ---------~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..+.+++|+| ++.+++++ |+.|.+||+.+++.+..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 277 (337)
T 1pby_B 232 AMREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVP 277 (337)
T ss_dssp EEEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred eEeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceec
Confidence 2345689998 89988888 7999999999988776654
No 397
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.06 E-value=6.2e-09 Score=108.90 Aligned_cols=188 Identities=10% Similarity=0.042 Sum_probs=123.3
Q ss_pred ccccCCCCCCCCcccc--------CC-CCCC-ceeeccCCCccceecccCCCCCCcEEEEEcCC-c--EEE-EEccCCce
Q 005147 499 HSQLSSDGRTSKPLVN--------ER-SSIN-NLGSKEGYSEGRRSGWINPFLEGLCKYLSFSK-L--RVK-ADLNQGDL 564 (712)
Q Consensus 499 ~~~~~~~g~~~~~~~~--------~~-~~~~-~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~-~--~v~-~dl~~~~~ 564 (712)
+..|+|||+.+.+... +. .... ...+..+.....++.| ..+|...+..... . .+. |++.+++.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI---TPDDQFAVTVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE---CTTSSEEEECCCSSSSCEEEEEETTTTEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE---CCCCCEEEEecCCCCcccEEEEECCCCCe
Confidence 6778888874411111 00 1112 3445555555544777 4455544444444 2 544 99988765
Q ss_pred ec---CCCCeeEEEEcCCCC-EEEEEeCCCc-EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCE-EEEEeC
Q 005147 565 LN---SSNLVCSLSFDRDGE-LFAAAGVNKK-IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ-IASSNF 638 (712)
Q Consensus 565 ~~---h~~~V~~i~f~~~~~-~lat~~~d~~-I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~-lasgs~ 638 (712)
.. +.....+++|+|+|+ +++++..++. |.+|++...... .. .. .........+.+++|+| ++++ ++++..
T Consensus 121 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~-~~-~~-~~~~~~~~~~~~~~~sp-dg~~l~v~~~~ 196 (331)
T 3u4y_A 121 ISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL-FD-TG-QEFISGGTRPFNITFTP-DGNFAFVANLI 196 (331)
T ss_dssp EEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE-EE-EE-EEEECSSSSEEEEEECT-TSSEEEEEETT
T ss_pred EEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE-ee-cC-CccccCCCCccceEECC-CCCEEEEEeCC
Confidence 42 456678999999998 4555566688 999998742110 00 00 12234456689999999 4764 555567
Q ss_pred CCcEEEEECCCCcE---EEEeccCCCcEEEEEEecCCCCEEEE-EECCCcEEEEeCCCCcE
Q 005147 639 EGVVQVWDVSRSQV---LTEMREHERRVWSIDFSSADPTLLAS-GSDDGSVKLWSINQAIL 695 (712)
Q Consensus 639 Dg~V~lwD~~~~~~---~~~~~~H~~~v~sv~fsp~~~~~l~s-gs~D~~v~lWd~~~~~~ 695 (712)
++.|.+||+.+++. +..+..+ ..+.+++|+| ++++++. ...++.|.+||+.+++.
T Consensus 197 ~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 197 GNSIGILETQNPENITLLNAVGTN-NLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp TTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECT-TSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCeEEEEECCCCcccceeeeccCC-CCCceEEECC-CCCEEEEEEcCCCEEEEEECCCCce
Confidence 89999999999987 7777744 6778999998 8886554 45688999999999876
No 398
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.04 E-value=4.6e-10 Score=131.25 Aligned_cols=155 Identities=12% Similarity=-0.017 Sum_probs=107.4
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEEEEccCCcee----cCCC---CeeEEEEcCCCCEEEEEeCC---------CcEEEE
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL----NSSN---LVCSLSFDRDGELFAAAGVN---------KKIKVF 595 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~----~h~~---~V~~i~f~~~~~~lat~~~d---------~~I~iw 595 (712)
..+.| +.||.+.+.+.+....+|++.+++.. +|.. .|.+++|+|||++|++++.+ +.|.+|
T Consensus 20 ~~~~~---spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 20 PEAKW---ISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCB---SSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccEE---cCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 45566 23444333333332333777766532 2333 49999999999999999875 678899
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcE------------
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRV------------ 663 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v------------ 663 (712)
|+.++... .......+...+.+++|+| +++.||+++. +.|.+||+.+++.......+...+
T Consensus 97 d~~~~~~~-----~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 97 KIPHGDPQ-----SLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp ESSSCCCE-----ECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred ECCCCceE-----eccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 99763210 0001123444588999999 6999999886 799999999988776665544433
Q ss_pred ------EEEEEecCCCCEEEEEECCC----------------------------------cEEEEeCCCCcEEE
Q 005147 664 ------WSIDFSSADPTLLASGSDDG----------------------------------SVKLWSINQAILLL 697 (712)
Q Consensus 664 ------~sv~fsp~~~~~l~sgs~D~----------------------------------~v~lWd~~~~~~v~ 697 (712)
.+++|+| ||+.|++++.|+ .|.+||+.+++...
T Consensus 170 e~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~ 242 (723)
T 1xfd_A 170 EILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL 242 (723)
T ss_dssp TTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE
T ss_pred EeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE
Confidence 7899998 999999998654 79999998887533
No 399
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.04 E-value=1.5e-09 Score=132.87 Aligned_cols=152 Identities=9% Similarity=0.029 Sum_probs=119.5
Q ss_pred CCCccceecccCCC-CCCc-EEEEEcCCcEEE-EEccCCce---ecCCC-CeeEEEEcCCCCEEEEEeCCCcEE-EEEcC
Q 005147 527 GYSEGRRSGWINPF-LEGL-CKYLSFSKLRVK-ADLNQGDL---LNSSN-LVCSLSFDRDGELFAAAGVNKKIK-VFECD 598 (712)
Q Consensus 527 h~~~~~~~~~~~~~-~~~~-~~~~~~~~~~v~-~dl~~~~~---~~h~~-~V~~i~f~~~~~~lat~~~d~~I~-iwD~~ 598 (712)
|...+..+.| + .+|. +.+.. .+.+. |++..+.. ..|.. .+.+++|+ ||+.|++++.+..|. +||+.
T Consensus 294 ~~~~v~~~~~---S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 294 SIPSKFAEDF---SPLDGDLIAFVS--RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp ECGGGGEEEE---EECGGGCEEEEE--TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT
T ss_pred cccccceeee---cCCCCCEEEEEE--cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC
Confidence 4456777888 4 4554 33333 34444 77776653 34666 89999999 999999999888888 88986
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~s 678 (712)
+.. ......|...+.+++|+| ++.+||+++.++.|.+||+.+++....+.+|...|.+++|+| |+++|++
T Consensus 368 ~~~--------~~~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp-DG~~la~ 437 (1045)
T 1k32_A 368 TGK--------AEKFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-NSRFIAY 437 (1045)
T ss_dssp TCC--------EEECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-TSCEEEE
T ss_pred CCC--------ceEecCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC-CCCeEEE
Confidence 521 112226678899999999 699999999999999999999998888888999999999998 9999998
Q ss_pred EECCC----------cEEEEeCCCCc
Q 005147 679 GSDDG----------SVKLWSINQAI 694 (712)
Q Consensus 679 gs~D~----------~v~lWd~~~~~ 694 (712)
++.++ .|++||+.+++
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred EecCccccccCCCCCeEEEEECCCCc
Confidence 88754 89999999876
No 400
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.03 E-value=2.2e-09 Score=125.89 Aligned_cols=105 Identities=6% Similarity=-0.044 Sum_probs=81.9
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~ 649 (712)
.|.+++|+|||++|++++. +.|.+||+.++.. ........+...+.+++|+| ++++||+++ ++.|.+||+.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~-----~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK-----AAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCST-----TSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCc-----ceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCC
Confidence 4789999999999999886 9999999976310 01122334567899999999 699999988 46899999999
Q ss_pred CcEEEEeccCCCc----------------EEEEEEecCCCCEEEEEECCC
Q 005147 650 SQVLTEMREHERR----------------VWSIDFSSADPTLLASGSDDG 683 (712)
Q Consensus 650 ~~~~~~~~~H~~~----------------v~sv~fsp~~~~~l~sgs~D~ 683 (712)
++.......+... +.+++|+| ||+.|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~ 230 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDE 230 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEEC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcC
Confidence 8877655544443 47899998 999999998776
No 401
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.03 E-value=2.7e-09 Score=121.61 Aligned_cols=182 Identities=12% Similarity=-0.036 Sum_probs=120.5
Q ss_pred ccccccCCCCCCCCcccc-CCC-------CCCceeeccCC-CccceecccCCCCCCcEEEEEcC----CcEEE--EEc--
Q 005147 497 VRHSQLSSDGRTSKPLVN-ERS-------SINNLGSKEGY-SEGRRSGWINPFLEGLCKYLSFS----KLRVK--ADL-- 559 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~-~~~-------~~~~~~l~gh~-~~~~~~~~~~~~~~~~~~~~~~~----~~~v~--~dl-- 559 (712)
+.++.|||||+.++.... +.. ......+..|. ..+....| + .| .+.++... ....+ +++
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~-s--pd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHY-G--VG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECT-T--CS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccC-C--CC-eEEEEeccCCCCcceEEEEEeccC
Confidence 778999999998754433 211 11223444555 57778888 3 34 44444432 22223 333
Q ss_pred cCCc-eecCCCCeeEEEEcCCCC--EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE
Q 005147 560 NQGD-LLNSSNLVCSLSFDRDGE--LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 636 (712)
Q Consensus 560 ~~~~-~~~h~~~V~~i~f~~~~~--~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg 636 (712)
..+. .+.....+...+|+|+++ .+++++.+ .+.+||+.++.. .....+.. .+++|+| ++++||++
T Consensus 100 ~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~--------~~l~~~~~--~~~~~sp-DG~~la~~ 167 (582)
T 3o4h_A 100 PGEEQRLEAVKPMRILSGVDTGEAVVFTGATED-RVALYALDGGGL--------RELARLPG--FGFVSDI-RGDLIAGL 167 (582)
T ss_dssp TTCCEECTTSCSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEE--------EEEEEESS--CEEEEEE-ETTEEEEE
T ss_pred CCccccccCCCCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcE--------EEeecCCC--ceEEECC-CCCEEEEE
Confidence 2211 222233455668888775 45555444 455999965311 11112222 7899999 69999988
Q ss_pred eCC----CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCC--cEEEEeCCCCcEE
Q 005147 637 NFE----GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG--SVKLWSINQAILL 696 (712)
Q Consensus 637 s~D----g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~--~v~lWd~~~~~~v 696 (712)
+.| +.|.+||+.+++.. .+..|...+.+++|+| ||+.|++++.|+ .|.+||+.+++..
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred EEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 877 78999999988754 6788999999999998 999999888899 8999999988876
No 402
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.03 E-value=1.8e-08 Score=106.47 Aligned_cols=161 Identities=11% Similarity=0.107 Sum_probs=106.8
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEE-EEcc-CCcee------c-CCCCeeEEEEcCCCCEEEE-EeCCCcEEEEEcCCc
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVK-ADLN-QGDLL------N-SSNLVCSLSFDRDGELFAA-AGVNKKIKVFECDAI 600 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~-~~~~~------~-h~~~V~~i~f~~~~~~lat-~~~d~~I~iwD~~~~ 600 (712)
+..+.| ..+|.+.+.+.....+. |++. .+.+. . ....+..++|+|||+++++ +..++.|.+||+...
T Consensus 143 ~~~~~~---spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 143 IHYTDL---TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp EEEEEE---CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred ceEEEE---CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 334666 34555566666666655 8887 55432 1 2346788999999995555 567899999998641
Q ss_pred cccCcccccceEEecC----CCCeEEEEEcCCCCCEE-EEEeCCCcEEEEECC---CCcEEEEeccCCCcEEEEEEecCC
Q 005147 601 INENRDIHYPVVEMAS----RSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVS---RSQVLTEMREHERRVWSIDFSSAD 672 (712)
Q Consensus 601 ~~~~~~~~~~~~~~~~----~~~v~~v~~~p~~~~~l-asgs~Dg~V~lwD~~---~~~~~~~~~~H~~~v~sv~fsp~~ 672 (712)
... ............ ...+..++|+| ++++| +++..++.|.+||+. +...+..+..|...+++++|+| +
T Consensus 220 ~g~-~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp-d 296 (347)
T 3hfq_A 220 TGA-FTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP-T 296 (347)
T ss_dssp TTE-EEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT-T
T ss_pred CCc-eEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC-C
Confidence 000 000000111111 14588999999 57766 666679999999997 3356677777777889999998 8
Q ss_pred CCEEEEEEC-CCcEEEE--eCCCCcEEE
Q 005147 673 PTLLASGSD-DGSVKLW--SINQAILLL 697 (712)
Q Consensus 673 ~~~l~sgs~-D~~v~lW--d~~~~~~v~ 697 (712)
+++|++++. ++.|.+| |..+++...
T Consensus 297 g~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 297 EAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 988777775 5999999 656666553
No 403
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.02 E-value=9.3e-09 Score=109.38 Aligned_cols=157 Identities=10% Similarity=0.092 Sum_probs=102.9
Q ss_pred ceecccCCCCCCc-EEEEEcCCcEEE-EEccCCc-------e----------ecCCCCeeEEEEcCCCCEEEEEe-CCCc
Q 005147 532 RRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGD-------L----------LNSSNLVCSLSFDRDGELFAAAG-VNKK 591 (712)
Q Consensus 532 ~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~-------~----------~~h~~~V~~i~f~~~~~~lat~~-~d~~ 591 (712)
..+.| ..+|. +.+.+.....+. |++.... + ..+.....+++|+|+|+++++++ .++.
T Consensus 158 ~~~~~---spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 158 HCVRI---TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp EEEEE---CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred eEEEE---CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 34555 34554 455555455544 7665322 1 12456678999999999877776 6899
Q ss_pred EEEEEcCCccccCcccccceE-EecCCCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECC--CCc--EEEEeccCCCcEE
Q 005147 592 IKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNF--EGVVQVWDVS--RSQ--VLTEMREHERRVW 664 (712)
Q Consensus 592 I~iwD~~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~--~~~--~~~~~~~H~~~v~ 664 (712)
|.+||+.++.... ...+. ...+.....+++|+| ++++|++++. ++.|.+||+. +++ .+..+.. ...++
T Consensus 235 v~v~~~~~g~~~~---~~~~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~ 309 (361)
T 3scy_A 235 VIAFRYADGMLDE---IQTVAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPR 309 (361)
T ss_dssp EEEEEEETTEEEE---EEEEESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCC
T ss_pred EEEEEecCCceEE---eEEEecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCc
Confidence 9999996421100 00011 112234568999999 5887766665 4899999996 454 4555554 56788
Q ss_pred EEEEecCCCCEEEEEE-CCCcEEEE--eCCCCcEEE
Q 005147 665 SIDFSSADPTLLASGS-DDGSVKLW--SINQAILLL 697 (712)
Q Consensus 665 sv~fsp~~~~~l~sgs-~D~~v~lW--d~~~~~~v~ 697 (712)
+++|+| ++++|++++ .++.|.+| |..+++...
T Consensus 310 ~~~~sp-dg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 310 NFIITP-NGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEECT-TSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred eEEECC-CCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 999998 899888777 68999996 555666543
No 404
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.02 E-value=1e-08 Score=107.26 Aligned_cols=157 Identities=11% Similarity=0.051 Sum_probs=104.6
Q ss_pred cCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEcc--CCcee-----cCCCCeeEEEEcCCCCEEEEEeC-CCcEEEE
Q 005147 526 EGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLN--QGDLL-----NSSNLVCSLSFDRDGELFAAAGV-NKKIKVF 595 (712)
Q Consensus 526 gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~--~~~~~-----~h~~~V~~i~f~~~~~~lat~~~-d~~I~iw 595 (712)
.|...+..+.| ..++. +.+.+.+++.+. |++. ++++. .....+.+++|+|+++++++++. ++.|.+|
T Consensus 35 ~~~~~~~~~~~---spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVV---SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEE---CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEE---CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 44455566666 33443 444444434544 7776 44422 12347899999999997776664 8899999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe-CCCcEEEEECCC-CcEEE----Eecc-CCCcEEEEEE
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSR-SQVLT----EMRE-HERRVWSIDF 668 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-~Dg~V~lwD~~~-~~~~~----~~~~-H~~~v~sv~f 668 (712)
|+..+ ..............+.+++|+| +++++++++ .++.|.+||+.+ ++... .+.. ....+.+++|
T Consensus 112 d~~~~-----~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 112 RLEDG-----LPVGVVDVVEGLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp EEETT-----EEEEEEEEECCCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred ECCCC-----ccccccccccCCCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEE
Confidence 99421 0112233344456689999999 577777777 899999999987 65432 2333 3457889999
Q ss_pred ecCCCCEEE-EEECCCcEEEEeCCC
Q 005147 669 SSADPTLLA-SGSDDGSVKLWSINQ 692 (712)
Q Consensus 669 sp~~~~~l~-sgs~D~~v~lWd~~~ 692 (712)
+| ++.+++ +++.++.|.+||+..
T Consensus 186 ~p-dg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 186 HP-NEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp CT-TSSEEEEEETTTTEEEEEESSC
T ss_pred CC-CCCEEEEEeCCCCEEEEEEecC
Confidence 98 888654 555899999999953
No 405
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.01 E-value=9.1e-09 Score=108.35 Aligned_cols=142 Identities=11% Similarity=0.142 Sum_probs=101.7
Q ss_pred CcEEE-EEccCCceec----CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEc
Q 005147 552 KLRVK-ADLNQGDLLN----SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (712)
Q Consensus 552 ~~~v~-~dl~~~~~~~----h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 626 (712)
+..+. |++.+++... +...+.+++|+|+++.+++++.++.|.+||..+...... ......++...+.+++|+
T Consensus 163 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSR---KKLLDDGKEHFFINISLD 239 (353)
T ss_dssp SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE---EECCCSSSCCCEEEEEEE
T ss_pred CceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE---EEcCCCCCCcccceEEEC
Confidence 34333 7776665432 455688999999999999999999999999976321000 000011245568899999
Q ss_pred CCCCCEEEEEe-CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 627 SYIKSQIASSN-FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 627 p~~~~~lasgs-~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
|. ++.++.++ .++.|.+||+.+++.+..+..+.. .+++|+| +++ +++++..|+.|.+||+.+++.+..+.
T Consensus 240 ~d-g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 240 TA-RQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp TT-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CC-CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECC-CCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 94 66555555 559999999999999888875443 5799998 777 55555579999999999998876654
No 406
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.01 E-value=3.4e-09 Score=123.60 Aligned_cols=142 Identities=13% Similarity=0.157 Sum_probs=101.4
Q ss_pred EEEccCCce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCC-----ccccCccc--ccceE-----EecCCCCe
Q 005147 556 KADLNQGDL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINENRDI--HYPVV-----EMASRSKL 620 (712)
Q Consensus 556 ~~dl~~~~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~-----~~~~~~~~--~~~~~-----~~~~~~~v 620 (712)
+|++.++.+ ..+...+.+++|+|||+.||++ .|+.|++||+.+ +....... ...+. ...+...+
T Consensus 105 ~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~ 183 (706)
T 2z3z_A 105 GFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIE 183 (706)
T ss_dssp EEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCC
T ss_pred EEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCC
Confidence 377766553 3466778999999999999995 689999999975 32111000 00000 00011225
Q ss_pred EEEEEcCCCCCEEEEEe---------------------------------CCCcEEEEECCCCcEEEEec--cCCCcEEE
Q 005147 621 SSICWNSYIKSQIASSN---------------------------------FEGVVQVWDVSRSQVLTEMR--EHERRVWS 665 (712)
Q Consensus 621 ~~v~~~p~~~~~lasgs---------------------------------~Dg~V~lwD~~~~~~~~~~~--~H~~~v~s 665 (712)
.+++|+| ++++|++++ .+..|.+||+.+++...... .|...+.+
T Consensus 184 ~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 184 KGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred ceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 8999999 699999987 34679999999988655443 57788999
Q ss_pred EEEecCCCCEEEEEECCC-----cEEEEeCCCCcEEEEEe
Q 005147 666 IDFSSADPTLLASGSDDG-----SVKLWSINQAILLLHLV 700 (712)
Q Consensus 666 v~fsp~~~~~l~sgs~D~-----~v~lWd~~~~~~v~~~~ 700 (712)
++|+| |++.|++++.|+ .|.+||+.+++.+..+.
T Consensus 263 ~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 263 LSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred EEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 99998 999999988776 99999999985554444
No 407
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.00 E-value=1.8e-08 Score=105.32 Aligned_cols=160 Identities=10% Similarity=0.050 Sum_probs=108.5
Q ss_pred CCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccCCce-e----cCCCCeeEEEEcCCCCEEEEEeCCC---cEEEEE
Q 005147 527 GYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDL-L----NSSNLVCSLSFDRDGELFAAAGVNK---KIKVFE 596 (712)
Q Consensus 527 h~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~-~----~h~~~V~~i~f~~~~~~lat~~~d~---~I~iwD 596 (712)
+.... .+.| ..++. +.+.+.....+. |++.++++ . .+..++.+++|+|++++++++..++ .|.+||
T Consensus 39 ~~~~~-~~~~---s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d 114 (331)
T 3u4y_A 39 GYDFV-DTAI---TSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYS 114 (331)
T ss_dssp CCCEE-EEEE---CSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEE
T ss_pred cCCcc-eEEE---cCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEE
Confidence 33344 6666 44554 555555455655 99988775 3 2445555599999999988555553 899999
Q ss_pred cCCccccCcccccceEEecCCCCeEEEEEcCCCCC-EEEEEeCCCc-EEEEECCCCcEE----EEeccCCCcEEEEEEec
Q 005147 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGV-VQVWDVSRSQVL----TEMREHERRVWSIDFSS 670 (712)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~-~lasgs~Dg~-V~lwD~~~~~~~----~~~~~H~~~v~sv~fsp 670 (712)
+.+.. .+..........+++|+|+ ++ +++++..++. |.+||+.....+ .....+...+.+++|+|
T Consensus 115 ~~~~~--------~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 115 FLKNK--------FISTIPIPYDAVGIAISPN-GNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp TTTTE--------EEEEEECCTTEEEEEECTT-SSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred CCCCC--------eEEEEECCCCccceEECCC-CCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 97521 2233444566799999995 65 5555566688 999999864332 12223456689999998
Q ss_pred CCCC-EEEEEECCCcEEEEeCCCCcE---EEEEe
Q 005147 671 ADPT-LLASGSDDGSVKLWSINQAIL---LLHLV 700 (712)
Q Consensus 671 ~~~~-~l~sgs~D~~v~lWd~~~~~~---v~~~~ 700 (712)
+++ +++++..++.|.+||+.+++. +..+.
T Consensus 186 -dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 186 -DGNFAFVANLIGNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp -TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred -CCCEEEEEeCCCCeEEEEECCCCcccceeeecc
Confidence 887 456666799999999999887 55543
No 408
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.97 E-value=6.7e-10 Score=129.95 Aligned_cols=160 Identities=9% Similarity=0.033 Sum_probs=108.2
Q ss_pred cceecccCCCCCCcEEEEEcC---------CcEEE-EEccCCce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 005147 531 GRRSGWINPFLEGLCKYLSFS---------KLRVK-ADLNQGDL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~---------~~~v~-~dl~~~~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~ 597 (712)
+....| +.||...+...+ +..+. |++.+++. ..-...+.+++|+|||+.||.+. ++.|++||+
T Consensus 62 ~~~~~~---SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGL---SPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp CSEEEE---CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred eeeEEE---CCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 667778 456654333322 24444 99998887 44456789999999999999986 789999999
Q ss_pred CCccccCc--ccccceEEecCCC---------CeEEEEEcCCCCCEEEEEeCCC--------------------------
Q 005147 598 DAIINENR--DIHYPVVEMASRS---------KLSSICWNSYIKSQIASSNFEG-------------------------- 640 (712)
Q Consensus 598 ~~~~~~~~--~~~~~~~~~~~~~---------~v~~v~~~p~~~~~lasgs~Dg-------------------------- 640 (712)
.++..... .........++.. ...+++|+| +++.||+++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 76422110 0000111112211 125899999 699999988663
Q ss_pred --------cEEEEECCCCcEE--------EEeccCCCcEEEEEEecCCCCEEEEEECC----CcEEEEe----CCCCcEE
Q 005147 641 --------VVQVWDVSRSQVL--------TEMREHERRVWSIDFSSADPTLLASGSDD----GSVKLWS----INQAILL 696 (712)
Q Consensus 641 --------~V~lwD~~~~~~~--------~~~~~H~~~v~sv~fsp~~~~~l~sgs~D----~~v~lWd----~~~~~~v 696 (712)
.|.+||+.+++.. ..+.+|...+.+++|+| |+.+++++... ..|.+|| +.++++.
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 7889999988653 22446889999999998 78888775533 2488899 7776543
No 409
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.96 E-value=1.2e-08 Score=119.08 Aligned_cols=135 Identities=15% Similarity=0.192 Sum_probs=98.8
Q ss_pred EEE-EEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCC-----cEEEEEcCCccccCcccccceEEecCCC---
Q 005147 554 RVK-ADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRS--- 618 (712)
Q Consensus 554 ~v~-~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~-----~I~iwD~~~~~~~~~~~~~~~~~~~~~~--- 618 (712)
.+. |++.+++.. .|...|.+++|+|||+.|++++.++ .|++||+.++.. ...+....+..
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~-----~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF-----VRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE-----EEEEEEEECSSCCC
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce-----eeEEEEccCCCeEC
Confidence 344 898877642 3567799999999999999988776 999999976311 11111112222
Q ss_pred CeEEEEEcC-CCCCEEEEEeCCCcEEEEECC-CCcEEEEeccCCCcEEE-EEEecCCCCEEEEE-ECCC----cEEEEeC
Q 005147 619 KLSSICWNS-YIKSQIASSNFEGVVQVWDVS-RSQVLTEMREHERRVWS-IDFSSADPTLLASG-SDDG----SVKLWSI 690 (712)
Q Consensus 619 ~v~~v~~~p-~~~~~lasgs~Dg~V~lwD~~-~~~~~~~~~~H~~~v~s-v~fsp~~~~~l~sg-s~D~----~v~lWd~ 690 (712)
.+.+++|+| .++.++++++.||.++||++. ++..+..+..|...+.+ ++|+| ++..|+.+ +.|+ .|..||+
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDP-KGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECT-TSSEEEEEESSSCTTCBEEEEEET
T ss_pred ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcC-CCCEEEEEecCCCCceEEEEEEEc
Confidence 246789998 137799999999999999987 67888899989888987 79998 77766554 4554 6777787
Q ss_pred CCCc
Q 005147 691 NQAI 694 (712)
Q Consensus 691 ~~~~ 694 (712)
.++.
T Consensus 390 ~~~~ 393 (706)
T 2z3z_A 390 KGGK 393 (706)
T ss_dssp TCCC
T ss_pred CCCC
Confidence 7665
No 410
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.93 E-value=4.9e-08 Score=103.69 Aligned_cols=149 Identities=15% Similarity=0.129 Sum_probs=98.7
Q ss_pred CCCcEEEEEcCCcEEE-EEccCCcee-------cC-----------CCCeeEEEEcCCCCEEEEEe-CCCcEEEEEcCCc
Q 005147 541 LEGLCKYLSFSKLRVK-ADLNQGDLL-------NS-----------SNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAI 600 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~-~dl~~~~~~-------~h-----------~~~V~~i~f~~~~~~lat~~-~d~~I~iwD~~~~ 600 (712)
....+.++++.++.+. |++.....+ .+ ...+.+++|+|+|+++++++ .++.|.+|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 3445666666666655 888642211 11 23457899999999665554 5899999998752
Q ss_pred cc----c-Cccc-ccceEEecCCCCeEEEEEcCCCCCEEEEEe-CCCcEEEEECCCCcE--EEEe---ccCCCcEEEEEE
Q 005147 601 IN----E-NRDI-HYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSRSQV--LTEM---REHERRVWSIDF 668 (712)
Q Consensus 601 ~~----~-~~~~-~~~~~~~~~~~~v~~v~~~p~~~~~lasgs-~Dg~V~lwD~~~~~~--~~~~---~~H~~~v~sv~f 668 (712)
.. . .... ............+.+++|+| ++++++.++ .++.|.+||+.++.. +..+ ..+...+.+++|
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~ 266 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHL 266 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEE
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEE
Confidence 11 0 0000 00223344566788999999 588777666 689999999997754 3333 334456789999
Q ss_pred ecCCCCEEEEEE-C-CCcEEEEeCC
Q 005147 669 SSADPTLLASGS-D-DGSVKLWSIN 691 (712)
Q Consensus 669 sp~~~~~l~sgs-~-D~~v~lWd~~ 691 (712)
+| |+++|+.+. . ++.|.+|++.
T Consensus 267 sp-dg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 267 SP-DGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CT-TSSEEEEEECSSSCEEEEEEEC
T ss_pred CC-CCCEEEEECCCCCCEEEEEEEc
Confidence 98 898775555 4 5899999995
No 411
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.92 E-value=2.8e-09 Score=124.72 Aligned_cols=102 Identities=9% Similarity=0.169 Sum_probs=77.6
Q ss_pred CeeEEEEcCCCCEEEEEeC---------CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 570 LVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~---------d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
.|.+++|+|||++||+++. ++.|++||+.++..... ..+ ...+.+++|+| +++.||++. |+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~---~~l-----~~~~~~~~~SP-DG~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG---NEL-----PRPIQYLCWSP-VGSKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS---SCC-----CSSBCCEEECS-STTCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc---eec-----CcccccceECC-CCCEEEEEE-CC
Confidence 4889999999999999876 78999999976422000 001 24688999999 699999886 78
Q ss_pred cEEEEECCCCcEEEEe-ccCCCcE-----------------EEEEEecCCCCEEEEEECC
Q 005147 641 VVQVWDVSRSQVLTEM-REHERRV-----------------WSIDFSSADPTLLASGSDD 682 (712)
Q Consensus 641 ~V~lwD~~~~~~~~~~-~~H~~~v-----------------~sv~fsp~~~~~l~sgs~D 682 (712)
.|.+||+.++++.... .++...| .+++|+| ||+.||+++.|
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d 189 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFN 189 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEEC
Confidence 9999999988765432 3343333 4899998 99999999876
No 412
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.90 E-value=3.8e-08 Score=103.86 Aligned_cols=157 Identities=10% Similarity=-0.011 Sum_probs=103.6
Q ss_pred cCCCccceecccCCCCCCcEEEEEcC--CcEEE-EEccCCce------ecCCCCeeEEEEcCCCCEEEEEe-CCCcEEEE
Q 005147 526 EGYSEGRRSGWINPFLEGLCKYLSFS--KLRVK-ADLNQGDL------LNSSNLVCSLSFDRDGELFAAAG-VNKKIKVF 595 (712)
Q Consensus 526 gh~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~-~dl~~~~~------~~h~~~V~~i~f~~~~~~lat~~-~d~~I~iw 595 (712)
++......+.| ..+|.+.+.+.. ++.+. |++..+.+ ..+...+.+++|+|++++|++++ .++.|.+|
T Consensus 37 ~~~~~p~~~a~---spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLAL---SAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EECSCCCCEEE---CTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eccCCcceEEE---ccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 33344445556 346654444432 34444 88876552 23577889999999999888888 78999999
Q ss_pred EcCCccccCcccccceEEec----------CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECC-CCcEE--EEeccC-CC
Q 005147 596 ECDAIINENRDIHYPVVEMA----------SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS-RSQVL--TEMREH-ER 661 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~----------~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~-~~~~~--~~~~~H-~~ 661 (712)
|+..... ...+.... ....+.+++|+|+ +++++++..++.|.+||+. +++.. ..+..+ ..
T Consensus 114 ~~~~~g~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 114 KIAADGA-----LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp EECTTSC-----EEEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred EeCCCCC-----eeecceeecCCCCCCccccCCCceEEEECCC-CcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 9963110 11111111 2235889999994 6677777778999999998 55432 233333 33
Q ss_pred cEEEEEEecCCCCEE-EEEECCCcEEEEeCCC
Q 005147 662 RVWSIDFSSADPTLL-ASGSDDGSVKLWSINQ 692 (712)
Q Consensus 662 ~v~sv~fsp~~~~~l-~sgs~D~~v~lWd~~~ 692 (712)
.+..++|+| |++++ +++..++.|.+|++..
T Consensus 188 ~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 188 GPRHLVFSP-DGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CEEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred CCceEEECC-CCCEEEEEeCCCCEEEEEEecC
Confidence 678899998 88854 5556789999999874
No 413
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.87 E-value=5.5e-08 Score=101.99 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=86.9
Q ss_pred eeEEEEcCCCCEEEEEeCC------------CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC
Q 005147 571 VCSLSFDRDGELFAAAGVN------------KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (712)
Q Consensus 571 V~~i~f~~~~~~lat~~~d------------~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~ 638 (712)
+.+++|+|+|+++++++.+ +.|.+||+.+... ...+....+...+.+++|+| +++ ++.++.
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~s~-dg~-l~~~~~ 166 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-----AKPVRTFPMPRQVYLMRAAD-DGS-LYVAGP 166 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-----BCCSEEEECCSSCCCEEECT-TSC-EEEESS
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc-----cceeeeccCCCcccceeECC-CCc-EEEccC
Confidence 7889999999999998865 8999999976321 11222333445688999999 467 555544
Q ss_pred CCcEEEEECCCCcEEEEeccCC----------------------------------------------------------
Q 005147 639 EGVVQVWDVSRSQVLTEMREHE---------------------------------------------------------- 660 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~---------------------------------------------------------- 660 (712)
.|.+||+.+++.+..+..+.
T Consensus 167 --~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 167 --DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp --SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred --cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 49999999998877765432
Q ss_pred ----------CcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 661 ----------RRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 661 ----------~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..+.+++|+|.++.+++++ ++.|.+||+.+++.+..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 292 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN 292 (349)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred EEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc
Confidence 1345667775478888877 8899999999988776654
No 414
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.85 E-value=9.9e-09 Score=120.69 Aligned_cols=102 Identities=12% Similarity=0.102 Sum_probs=75.1
Q ss_pred eeEEEEcCCCCEEEEEeCC---------CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 571 VCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 571 V~~i~f~~~~~~lat~~~d---------~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
..+++|||||++|+.++.+ +.+.+||+.++... ....+...+..++||| +++.||.+. |+.
T Consensus 64 ~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--------~l~~~~~~~~~~~~SP-dG~~la~~~-~~~ 133 (740)
T 4a5s_A 64 INDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSP-VGHKLAYVW-NND 133 (740)
T ss_dssp CCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--------CSSCCCTTEEEEEECS-STTCEEEEE-TTE
T ss_pred ccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE--------EcccCCCcceeeEECC-CCCEEEEEE-CCe
Confidence 3568999999999998876 55679999874221 1234566799999999 689998884 789
Q ss_pred EEEEECCCCcEEE-EeccCCCcE-----------------EEEEEecCCCCEEEEEECCC
Q 005147 642 VQVWDVSRSQVLT-EMREHERRV-----------------WSIDFSSADPTLLASGSDDG 683 (712)
Q Consensus 642 V~lwD~~~~~~~~-~~~~H~~~v-----------------~sv~fsp~~~~~l~sgs~D~ 683 (712)
|.+||+.+++..+ +..++...+ .++.||| ||+.||.++.|.
T Consensus 134 i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~ 192 (740)
T 4a5s_A 134 IYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFND 192 (740)
T ss_dssp EEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEEC
T ss_pred EEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcc
Confidence 9999999887544 223343333 3489998 999999987543
No 415
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.84 E-value=4.2e-08 Score=105.26 Aligned_cols=140 Identities=13% Similarity=0.057 Sum_probs=103.0
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEEEEccCCc--------------eecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEc
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVKADLNQGD--------------LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC 597 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~--------------~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~ 597 (712)
..+++ ....|++..++.+.. ++|+++... ...+.+ |..++| |+.+|+++ .++.|++||+
T Consensus 41 nlLai--s~~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 41 QNLDI--SNSKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp BCEEE--ETTTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cEEEE--cCCCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 44444 334555555555444 447765322 234566 999999 89999998 8899999999
Q ss_pred CCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEE
Q 005147 598 DAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLA 677 (712)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~ 677 (712)
++..+ ......+...+.++.+.+. .+|+++.||.|.+||+.+++... +...|.|++||| +| ++
T Consensus 114 ~sl~~-------~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSp-kG--~~ 176 (388)
T 1xip_A 114 EELSE-------FRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTN-SQ--LA 176 (388)
T ss_dssp SSTTC-------EEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECS-SE--EE
T ss_pred hhhhc-------cCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcC-Cc--eE
Confidence 76331 2233456677888888763 39999999999999999887653 457899999998 77 78
Q ss_pred EEECCCcEEEEeCCCCcE
Q 005147 678 SGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~ 695 (712)
.|..||++++|+...+..
T Consensus 177 vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp EEETTSCEEEEEEETTEE
T ss_pred EEEcCCcEEEEcCCCccc
Confidence 899999999999887664
No 416
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.82 E-value=4.8e-08 Score=102.43 Aligned_cols=119 Identities=10% Similarity=0.061 Sum_probs=84.9
Q ss_pred CeeEEEEcCCCCEE-EEEeCCCcEEEEEcCCccccCcccccceEEecC-----CCCeEEEEEcCCCCCEEEEEeCC----
Q 005147 570 LVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-----RSKLSSICWNSYIKSQIASSNFE---- 639 (712)
Q Consensus 570 ~V~~i~f~~~~~~l-at~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~-----~~~v~~v~~~p~~~~~lasgs~D---- 639 (712)
.+.+++|+|+++++ ++++.++.|.+||+.+.... ......+ ...+.+++|+| ++++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~------~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~ 116 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT------FHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRL 116 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE------EEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE------EEEEcccccccccccccceEECC-CCCEEEEEccccccc
Confidence 57899999999855 55567899999999763110 0111111 12377899999 58888888865
Q ss_pred --------CcEEEEECCCCc---EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 640 --------GVVQVWDVSRSQ---VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 640 --------g~V~lwD~~~~~---~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+.|.+||+.+++ .+..+. +...+.+++|+| ++. ++.++. .|.+||+.+++.+..+.
T Consensus 117 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~-dg~-l~~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 117 NDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD-DGS-LYVAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp SSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT-TSC-EEEESS--SEEEECTTTCCEEEEEC
T ss_pred ccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC-CCc-EEEccC--cEEEEeCCCCceecccc
Confidence 999999999853 344444 344688999998 888 444543 49999999998876654
No 417
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.74 E-value=2.7e-07 Score=98.46 Aligned_cols=160 Identities=8% Similarity=0.031 Sum_probs=104.6
Q ss_pred CCccceecccCCCCCCc-EEEEEcCCcEEE-EEcc-CCcee--------cCCCCeeEEEEcCCCCEEEEEeC-CCcEEEE
Q 005147 528 YSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLN-QGDLL--------NSSNLVCSLSFDRDGELFAAAGV-NKKIKVF 595 (712)
Q Consensus 528 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~-~~~~~--------~h~~~V~~i~f~~~~~~lat~~~-d~~I~iw 595 (712)
.....++.| ..+|. +.+.+.....+. |++. ++++. .|...+..++|+|+|+++++++. ++.|.+|
T Consensus 144 ~~~~~~~~~---spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 144 NTGIHGMVF---DPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp TCCEEEEEE---CTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCcceEEEE---CCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 344556666 45554 444454444554 8887 66542 13567899999999998887774 7899999
Q ss_pred EcCC--ccccCcccccceEEe-----cCCC------CeEEEE-EcCCCCCEEEEEeCCC------cEEEEECC-CCcEEE
Q 005147 596 ECDA--IINENRDIHYPVVEM-----ASRS------KLSSIC-WNSYIKSQIASSNFEG------VVQVWDVS-RSQVLT 654 (712)
Q Consensus 596 D~~~--~~~~~~~~~~~~~~~-----~~~~------~v~~v~-~~p~~~~~lasgs~Dg------~V~lwD~~-~~~~~~ 654 (712)
+++. +.... ....+... ++.. .+.+++ |+| ++++|++++.+. +|.+||+. +++...
T Consensus 221 ~~~~~~g~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 221 VIDPATHMPVY--THHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EECTTTCCEEE--EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred EEeCCCCcEEE--ccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 8753 11000 00001111 1122 488999 999 588877766432 89999996 666543
Q ss_pred ---EeccCCCcEEEEEEecC--CCCEEEEEEC-CCcEEEEeCCCC
Q 005147 655 ---EMREHERRVWSIDFSSA--DPTLLASGSD-DGSVKLWSINQA 693 (712)
Q Consensus 655 ---~~~~H~~~v~sv~fsp~--~~~~l~sgs~-D~~v~lWd~~~~ 693 (712)
....+...+..++|+|. ++++|++++. +++|.+|++...
T Consensus 298 ~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 298 QLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 23345566778999986 6899988876 599999999765
No 418
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.74 E-value=5.4e-07 Score=92.15 Aligned_cols=148 Identities=14% Similarity=0.207 Sum_probs=105.0
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee------cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCcccc
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL------NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 603 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~------~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~ 603 (712)
..++.+ ..+|.+.++......+. |+.. +... ++...+.+|+++++++++++...++.|++||....
T Consensus 123 ~~~i~~---~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--- 195 (286)
T 1q7f_A 123 PRGVTV---DNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ--- 195 (286)
T ss_dssp EEEEEE---CTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---
T ss_pred ceEEEE---eCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---
Confidence 344444 23555556655555544 6643 3322 23456899999999998888888999999997431
Q ss_pred CcccccceEEec---CCCCeEEEEEcCCCCCEEEEEeCCC-cEEEEECCCCcEEEEeccCCC--cEEEEEEecCCCCEEE
Q 005147 604 NRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFEG-VVQVWDVSRSQVLTEMREHER--RVWSIDFSSADPTLLA 677 (712)
Q Consensus 604 ~~~~~~~~~~~~---~~~~v~~v~~~p~~~~~lasgs~Dg-~V~lwD~~~~~~~~~~~~H~~--~v~sv~fsp~~~~~l~ 677 (712)
.+.... +...+..|+++| +++++++...++ .|.+||. +++.+.++..+.. .+++++|+| ++++++
T Consensus 196 ------~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~-~g~l~v 266 (286)
T 1q7f_A 196 ------YLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD-DGSVVL 266 (286)
T ss_dssp ------EEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET-TTEEEE
T ss_pred ------EEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC-CCcEEE
Confidence 112222 235688999999 588888888886 9999995 5777777766543 488999998 888888
Q ss_pred EEECCCcEEEEeCCCCcE
Q 005147 678 SGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~ 695 (712)
+ +.|++|++|++....+
T Consensus 267 s-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 267 A-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp E-ETTTEEEEEECSCCCC
T ss_pred E-CCCCeEEEEEcccccc
Confidence 7 5799999999876443
No 419
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.73 E-value=1.2e-07 Score=109.56 Aligned_cols=125 Identities=6% Similarity=-0.027 Sum_probs=91.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCC----------CcEEEEEcCCccccCcccccceEEe-cCCCCeEEEEEcCCCCCEEEE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 635 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d----------~~I~iwD~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~las 635 (712)
|...+.+++|+|||+.|++++.+ ..|++||+.+..... ........ .+...+..++|+| ++++|+.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~Sp-DG~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD--RSAVRELSDDAHRFVTGPRLSP-DGRQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC--GGGSEESSCSCSSEECCCEECT-TSSEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc--CCceeEEEecCCCcccCceECC-CCCEEEE
Confidence 56678899999999999998877 589999986510000 00112222 3446678899999 6999988
Q ss_pred EeCCC--------cEEEEECC-CC---cEEEEeccCCCcEEEEEEecCCCCEEEEEECCC--cEEEEeCCCCcE
Q 005147 636 SNFEG--------VVQVWDVS-RS---QVLTEMREHERRVWSIDFSSADPTLLASGSDDG--SVKLWSINQAIL 695 (712)
Q Consensus 636 gs~Dg--------~V~lwD~~-~~---~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~--~v~lWd~~~~~~ 695 (712)
++.++ .|.+||+. ++ +......+|...+.++.|+| ||+++++++.|+ .|.+||+.+++.
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCce
Confidence 87653 79999999 57 44444555688999999998 888888888888 566667656654
No 420
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.70 E-value=7.9e-09 Score=110.31 Aligned_cols=66 Identities=8% Similarity=0.164 Sum_probs=54.2
Q ss_pred EEEEee-CCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhcCceeccCCCCceeecCCCc----------EEEEec
Q 005147 58 VHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH----------VSFIES 126 (712)
Q Consensus 58 ~l~~e~-~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~gIvHrDLkP~NIll~~~~~----------vkl~df 126 (712)
+++||+ .|.+|.+++ ...++..++.||+.+|.+||.+|||||||||.|||++.++. +.||||
T Consensus 187 ~LVME~i~G~~L~~l~-------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~ 259 (397)
T 4gyi_A 187 TIVMSLVDALPMRQVS-------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXF 259 (397)
T ss_dssp EEEEECCSCEEGGGCC-------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCC
T ss_pred eEEEEecCCccHhhhc-------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEe
Confidence 567777 688887643 22356788999999999999999999999999999987763 889999
Q ss_pred cccc
Q 005147 127 ASCS 130 (712)
Q Consensus 127 g~~~ 130 (712)
+-+-
T Consensus 260 ~Q~V 263 (397)
T 4gyi_A 260 PQMV 263 (397)
T ss_dssp TTCE
T ss_pred CCcc
Confidence 8763
No 421
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.69 E-value=1.2e-06 Score=91.93 Aligned_cols=149 Identities=11% Similarity=0.131 Sum_probs=109.7
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEE-----
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE----- 613 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~----- 613 (712)
+..++.+.+++..++++...... ++-....+|+|+|+|+++++...+++|++||..... ..+..
T Consensus 65 ~~~~~~i~~~d~~~g~~~~~~~~----~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-------~~~~~~~~~~ 133 (329)
T 3fvz_A 65 PIEEDTILVIDPNNAEILQSSGK----NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-------GPLLILGRSM 133 (329)
T ss_dssp SCCSCCEEEECTTTCCEEEEECT----TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-------CCSEEESBTT
T ss_pred cccCCcEEEEECCCCeEEeccCC----CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-------EEEEEecccC
Confidence 34556667776666665432221 244678899999999999998899999999985411 01111
Q ss_pred -----ecCCCCeEEEEEcCCCCCEEEEEe-CCCcEEEEECCCCcEEEEeccC----------CCcEEEEEEecCCCCEEE
Q 005147 614 -----MASRSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSRSQVLTEMREH----------ERRVWSIDFSSADPTLLA 677 (712)
Q Consensus 614 -----~~~~~~v~~v~~~p~~~~~lasgs-~Dg~V~lwD~~~~~~~~~~~~H----------~~~v~sv~fsp~~~~~l~ 677 (712)
..+-.....|+++|.++.++++.+ .++.|.+|| .++..+..+... -...++|+|+|..+.+++
T Consensus 134 ~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v 212 (329)
T 3fvz_A 134 QPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV 212 (329)
T ss_dssp BCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE
T ss_pred CCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE
Confidence 123446889999996688888886 599999999 678888877533 234899999983388999
Q ss_pred EEECCCcEEEEeCCCCcEEEEE
Q 005147 678 SGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+.+.+++|++||..+++.+.++
T Consensus 213 ~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 213 ADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EETTTTEEEEEETTTCCEEEEE
T ss_pred EECCCCEEEEEECCCCcEEEEE
Confidence 9999999999999988887765
No 422
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.69 E-value=1.3e-07 Score=109.40 Aligned_cols=158 Identities=11% Similarity=0.018 Sum_probs=106.6
Q ss_pred CCCccceecccCCCCCCc-EEEEEcC-------C--cEEE-EEccC------Cc---ee-cCCCCeeEEEEcCCCCEEEE
Q 005147 527 GYSEGRRSGWINPFLEGL-CKYLSFS-------K--LRVK-ADLNQ------GD---LL-NSSNLVCSLSFDRDGELFAA 585 (712)
Q Consensus 527 h~~~~~~~~~~~~~~~~~-~~~~~~~-------~--~~v~-~dl~~------~~---~~-~h~~~V~~i~f~~~~~~lat 585 (712)
|...+....| +.||. +.+.+.+ . ..+. |++.+ +. +. .+...+.+++|+|||+.|+.
T Consensus 128 ~~~~~~~~~~---spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVL---LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVW 204 (662)
T ss_dssp TCEEEEEEEE---ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEE
T ss_pred CCccccCcEE---CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEE
Confidence 5556667778 44554 4444433 1 2344 88877 54 33 45567888999999999998
Q ss_pred EeCCC--------cEEEEEcC-CccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC--cEEEEECCCCcEEE
Q 005147 586 AGVNK--------KIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVWDVSRSQVLT 654 (712)
Q Consensus 586 ~~~d~--------~I~iwD~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg--~V~lwD~~~~~~~~ 654 (712)
++.++ .|.+||+. ++. ..........+...+..++|+| ++.++++++.+| .|.+||+.+++...
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~----~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~ 279 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGR----FADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQ 279 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSC----EEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEE
T ss_pred EECCCCCCCCCCcEEEEEEECCCCc----ccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceee
Confidence 88653 79999986 320 0011122234467899999999 477888998898 56666776776554
Q ss_pred EeccCCCc--------EEEEEEecCCCCEEEEEECCCcEEEE--eCCCCc
Q 005147 655 EMREHERR--------VWSIDFSSADPTLLASGSDDGSVKLW--SINQAI 694 (712)
Q Consensus 655 ~~~~H~~~--------v~sv~fsp~~~~~l~sgs~D~~v~lW--d~~~~~ 694 (712)
...+|... +.+++|+| ++.++++++. +.++|| |+.++.
T Consensus 280 l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 280 LCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp SSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred cccccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCc
Confidence 44433332 56789997 8999999999 999999 665554
No 423
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.60 E-value=2.6e-07 Score=108.61 Aligned_cols=195 Identities=11% Similarity=0.042 Sum_probs=120.7
Q ss_pred cccccccCCCCCCCCcc-------ccCCCCCCceeeccCCCccceecc--cCCCCCCcEEEEEcCC---------cEE-E
Q 005147 496 LVRHSQLSSDGRTSKPL-------VNERSSINNLGSKEGYSEGRRSGW--INPFLEGLCKYLSFSK---------LRV-K 556 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~l~gh~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~v-~ 556 (712)
...++.|++||..+... ... .......+.+|........+ +.-+.||...+...+. +.+ +
T Consensus 18 ~~~~~~w~~dg~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQENNILVFNAE-YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCCEEECSSSEEEEEETTEEEEEETT-TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cccccEECCCCcEEEEcCCcEEEEECC-CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 34578899998755221 111 11223456666654333211 1115566544444332 222 5
Q ss_pred EEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc--ccccceEEecCC---------CCeEE
Q 005147 557 ADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR--DIHYPVVEMASR---------SKLSS 622 (712)
Q Consensus 557 ~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~--~~~~~~~~~~~~---------~~v~~ 622 (712)
|++.++++. .|.+.+...+|||||+.||.+. ++.|++||+.++..... .........++. .....
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred EECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcc
Confidence 999988754 5678899999999999999874 78999999876321110 011111111111 22245
Q ss_pred EEEcCCCCCEEEEEeCCC------------------------------------cEEEEECCC---Cc--EEEEec----
Q 005147 623 ICWNSYIKSQIASSNFEG------------------------------------VVQVWDVSR---SQ--VLTEMR---- 657 (712)
Q Consensus 623 v~~~p~~~~~lasgs~Dg------------------------------------~V~lwD~~~---~~--~~~~~~---- 657 (712)
+.|+| +++.||.++.|. +|.+||+.+ ++ ....+.
T Consensus 176 ~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 176 LWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp EEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred eEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 89999 699998876432 478899988 73 233343
Q ss_pred --cCCCcEEEEEEecCCCCEEEEEEC----CCcEEEEeCCCCc
Q 005147 658 --EHERRVWSIDFSSADPTLLASGSD----DGSVKLWSINQAI 694 (712)
Q Consensus 658 --~H~~~v~sv~fsp~~~~~l~sgs~----D~~v~lWd~~~~~ 694 (712)
+|...+.+++|+| |+++++.... +..|.+||+.+++
T Consensus 255 ~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 255 MLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp HHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 3888999999998 8886666533 4479999999887
No 424
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.58 E-value=1.8e-06 Score=92.22 Aligned_cols=184 Identities=9% Similarity=-0.047 Sum_probs=112.9
Q ss_pred ccccCCCCCCCCccccCCC-----------CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCcee-
Q 005147 499 HSQLSSDGRTSKPLVNERS-----------SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGDLL- 565 (712)
Q Consensus 499 ~~~~~~~g~~~~~~~~~~~-----------~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~~~- 565 (712)
...|||||+.++....... ..+.....+|...+.+..| +.||...++...+..+ +|++.+++..
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~---spdg~~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFL---SPDDDALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEE---CTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEE---cCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 3679999997744333111 1111122344444445667 4566444444444444 4999887643
Q ss_pred ---cCCCCeeEEE--EcCCCCEEEEE----------------------eCCCcEEEEEcCCccccCcccccceEEecCCC
Q 005147 566 ---NSSNLVCSLS--FDRDGELFAAA----------------------GVNKKIKVFECDAIINENRDIHYPVVEMASRS 618 (712)
Q Consensus 566 ---~h~~~V~~i~--f~~~~~~lat~----------------------~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~ 618 (712)
.+...+.... +++++.+++.. +.+..|.+||+.++. ......+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--------~~~l~~~~~ 188 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--------STVILQENQ 188 (388)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--------EEEEEEESS
T ss_pred eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--------eEEeecCCc
Confidence 3455554444 48999988743 244679999987631 122334556
Q ss_pred CeEEEEEcCCCCCEEEEEeCC------CcEEEEECCCCcEEEEeccCC--CcEEEEEEecCCCCEEEEEEC-CC----cE
Q 005147 619 KLSSICWNSYIKSQIASSNFE------GVVQVWDVSRSQVLTEMREHE--RRVWSIDFSSADPTLLASGSD-DG----SV 685 (712)
Q Consensus 619 ~v~~v~~~p~~~~~lasgs~D------g~V~lwD~~~~~~~~~~~~H~--~~v~sv~fsp~~~~~l~sgs~-D~----~v 685 (712)
.+..++|+|.++..|+.+..+ ..|.+||+..+.. ..+..+. ..+..+.|+| ||+.|+..+. ++ .|
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l 266 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVP-DGSALVYVSYLKGSPDRFI 266 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECT-TSSCEEEEEEETTCCCEEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECC-CCCEEEEEecCCCCCcceE
Confidence 789999999447777776653 3677788765543 4454454 3688899998 8887765554 22 39
Q ss_pred EEEeCCCCcE
Q 005147 686 KLWSINQAIL 695 (712)
Q Consensus 686 ~lWd~~~~~~ 695 (712)
.+||+.+++.
T Consensus 267 ~~~d~~~g~~ 276 (388)
T 3pe7_A 267 YSADPETLEN 276 (388)
T ss_dssp EEECTTTCCE
T ss_pred EEEecCCCce
Confidence 9999998874
No 425
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.56 E-value=1e-06 Score=94.15 Aligned_cols=73 Identities=15% Similarity=0.226 Sum_probs=60.2
Q ss_pred EEEcCCCCCEEEEEeC-----------CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 623 ICWNSYIKSQIASSNF-----------EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 623 v~~~p~~~~~lasgs~-----------Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
++|+|. +..++.+.. .+.|.+||+.+++.+.++..+. +++|+|+| |+++|++++. ++|.+||..
T Consensus 259 ~a~~~d-g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~sp-dg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRA-SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQ-QRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp EEEETT-TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEET-TTTEEEEECS-SCEEEEECS
T ss_pred EEEecC-CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECC-CCCEEEEeCC-CeEEEEECC
Confidence 678884 555544432 3489999999999999999887 99999998 8999998887 999999999
Q ss_pred CC--cEEEEEe
Q 005147 692 QA--ILLLHLV 700 (712)
Q Consensus 692 ~~--~~v~~~~ 700 (712)
++ +.+.++.
T Consensus 334 t~~l~~~~~i~ 344 (361)
T 2oiz_A 334 QPEPKLLRTIE 344 (361)
T ss_dssp SSSCEEEEEET
T ss_pred CCcceeeEEec
Confidence 99 8887763
No 426
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.55 E-value=5.5e-06 Score=84.53 Aligned_cols=120 Identities=12% Similarity=0.196 Sum_probs=93.3
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe---cCCCCeEEEEEcCCCCCEEEEEeCCCcEE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~lasgs~Dg~V~ 643 (712)
+...+.+++++++++++++...++.|.+||.... .+... .+...+.+|+++| +++++++...++.|.
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---------VLHKFGCSKHLEFPNGVVVND-KQEIFISDNRAHCVK 188 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---------EEEEEECTTTCSSEEEEEECS-SSEEEEEEGGGTEEE
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC---------EEEEeCCCCccCCcEEEEECC-CCCEEEEECCCCEEE
Confidence 3467899999999998888888899999996431 11112 3445689999999 588888888899999
Q ss_pred EEECCCCcEEEEeccC--CCcEEEEEEecCCCCEEEEEECCC-cEEEEeCCCCcEEEEE
Q 005147 644 VWDVSRSQVLTEMREH--ERRVWSIDFSSADPTLLASGSDDG-SVKLWSINQAILLLHL 699 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H--~~~v~sv~fsp~~~~~l~sgs~D~-~v~lWd~~~~~~v~~~ 699 (712)
+||. +++.+.++..+ ...+.+|+++| ++.++++.+.++ .|.+||.. ++.+..+
T Consensus 189 ~~~~-~g~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~-g~~~~~~ 244 (286)
T 1q7f_A 189 VFNY-EGQYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQD-GQLISAL 244 (286)
T ss_dssp EEET-TCCEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTT-SCEEEEE
T ss_pred EEcC-CCCEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCC-CCEEEEE
Confidence 9997 56677777544 46789999997 899999988886 99999964 6665544
No 427
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.55 E-value=9.7e-07 Score=94.12 Aligned_cols=120 Identities=8% Similarity=0.066 Sum_probs=85.2
Q ss_pred CeeEEEEcCCCCE--EEEEe-------------CCCcEEEEEcCCccccCcccccceEEe--cCCCCeEEEEEcCCCCCE
Q 005147 570 LVCSLSFDRDGEL--FAAAG-------------VNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQ 632 (712)
Q Consensus 570 ~V~~i~f~~~~~~--lat~~-------------~d~~I~iwD~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~ 632 (712)
.+.+++|+|+|++ ++++. .++++.+|++.... .....+... .+...+.+++|+| ++++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~sp-dG~~ 158 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG----KLEKNVQNYEYQENTGIHGMVFDP-TETY 158 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC----CEEEEEEEEECCTTCCEEEEEECT-TSSE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC----cCcceEeeEEeCCCCcceEEEECC-CCCE
Confidence 4667899999994 55553 68999999996311 001111111 3556799999999 5888
Q ss_pred EEEEeC-CCcEEEEECC-CCcEE--EEec--cCCCcEEEEEEecCCCCEEEEEEC-CCcEEEEeCC--CCcE
Q 005147 633 IASSNF-EGVVQVWDVS-RSQVL--TEMR--EHERRVWSIDFSSADPTLLASGSD-DGSVKLWSIN--QAIL 695 (712)
Q Consensus 633 lasgs~-Dg~V~lwD~~-~~~~~--~~~~--~H~~~v~sv~fsp~~~~~l~sgs~-D~~v~lWd~~--~~~~ 695 (712)
|++++. ++.|.+||+. +++.. ..+. .|...+..++|+| +++++++++. ++.|.+|++. +++.
T Consensus 159 l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 159 LYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 877764 6899999998 77643 3343 2467799999998 8988887775 7899999765 5654
No 428
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.51 E-value=4.9e-06 Score=86.92 Aligned_cols=186 Identities=10% Similarity=0.036 Sum_probs=118.5
Q ss_pred cccccccCCCCCCCCccccCCC-----CCCceeeccCCCccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee----
Q 005147 496 LVRHSQLSSDGRTSKPLVNERS-----SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL---- 565 (712)
Q Consensus 496 ~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~l~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~---- 565 (712)
.+.+..+++++..+.....+.. ..+...+.++.....++.| ..+|.+.+.+...+.+. |+..++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITAEPWLEISKKGLQLEGLNF---DRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEECEEEEEEESSCCCEEEEEE---CTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred ccceeeecCCccceeEEeecccCcccccceeEEEeccCccccCcEE---CCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 3556677777665532222211 1122345556666677888 35666555555555554 888776643
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeC---
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF--- 638 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~--- 638 (712)
.+...+.+++|++++++++++..+ +.|.+||..+.... ...........+.+++++| +++++++...
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-----~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-----DIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYS 157 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-----EEECSSSSCCCEEEEEECT-TSCEEEEECCCBT
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-----EEEccCccCCcccceEECC-CCCEEEEeccccc
Confidence 356789999999999988887766 68999998652211 0001112345789999999 5787777654
Q ss_pred ---CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCE-EEEEECCCcEEEEeCCC
Q 005147 639 ---EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL-LASGSDDGSVKLWSINQ 692 (712)
Q Consensus 639 ---Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~-l~sgs~D~~v~lWd~~~ 692 (712)
.+.|..||..+++.. .+..+...+.+++|+| ++.. +++.+.++.|.+||+.+
T Consensus 158 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVT-PIIQNISVANGIALST-DEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp TBCCEEEEEECTTSCCEE-EEEEEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECT
T ss_pred cCCCceEEEEeCCCCEEE-EeecCCCcccceEECC-CCCEEEEEeCCCCeEEEEEecC
Confidence 355666676655543 3333445688999998 8874 45656689999999964
No 429
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.47 E-value=1.4e-05 Score=83.74 Aligned_cols=156 Identities=14% Similarity=0.143 Sum_probs=110.2
Q ss_pred ccceecccCCCCCCcEEEEEcCCcEEE-EEccCC--ce------------ecCCCCeeEEEEcC-CCCEEEEEe-CCCcE
Q 005147 530 EGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQG--DL------------LNSSNLVCSLSFDR-DGELFAAAG-VNKKI 592 (712)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~--~~------------~~h~~~V~~i~f~~-~~~~lat~~-~d~~I 592 (712)
...++.+ ..+|.+.+++....++. |+.... .+ .++.....+|+|+| ++.++++.+ .+++|
T Consensus 92 ~p~gia~---d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 92 LPHGLSI---DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp SEEEEEE---CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred CceEEEE---CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 3445555 34566666666666655 766432 11 12344688999999 888999887 69999
Q ss_pred EEEEcCCccccCcccccceEEe-----------cCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEec--cC
Q 005147 593 KVFECDAIINENRDIHYPVVEM-----------ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR--EH 659 (712)
Q Consensus 593 ~iwD~~~~~~~~~~~~~~~~~~-----------~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~--~H 659 (712)
++||.... .+... ++-.....|+++|..+.++++...++.|++||..+++.+.++. .+
T Consensus 169 ~~~~~~g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~ 239 (329)
T 3fvz_A 169 VQFSPSGK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF 239 (329)
T ss_dssp EEECTTSC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT
T ss_pred EEEcCCCC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc
Confidence 99995421 01111 1123478999999547888888899999999999999998884 56
Q ss_pred CCcEEEEEEecCCCCEEEEEE-------CCCcEEEEeCCCCcEEEEE
Q 005147 660 ERRVWSIDFSSADPTLLASGS-------DDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 660 ~~~v~sv~fsp~~~~~l~sgs-------~D~~v~lWd~~~~~~v~~~ 699 (712)
...+++++|+| +..+++.+ .+.+|++||+.+++.+..+
T Consensus 240 ~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 240 GRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp TTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred CCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 77899999997 44444443 3458999999999888765
No 430
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.42 E-value=1.1e-06 Score=102.74 Aligned_cols=116 Identities=17% Similarity=0.246 Sum_probs=86.6
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCC-----cEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~-----~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~ 641 (712)
|...+.+++|+|||++||.++.++ .|++||+.++... ... . ....+.+++|+| +++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~------~~~-~-~~~~~~~~~wsp-Dg~~l~~~~~~~~ 193 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL------PDV-L-ERVKFSCMAWTH-DGKGMFYNAYPQQ 193 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE------EEE-E-EEECSCCEEECT-TSSEEEEEECCCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC------ccc-c-cCcccceEEEEe-CCCEEEEEEECCc
Confidence 444688999999999998876543 8999999763211 111 1 112367899999 6889998888876
Q ss_pred ----------------EEEEECCCCc----EEEEeccCCCcEEEEEEecCCCCEEEEEEC-----CCcEEEEeCCC
Q 005147 642 ----------------VQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSD-----DGSVKLWSINQ 692 (712)
Q Consensus 642 ----------------V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~-----D~~v~lWd~~~ 692 (712)
|.+|++.+++ .+.....|...+.++.|+| ||++|+.++. +..|.+||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcc
Confidence 9999999876 3333334667789999998 9998888775 67899999986
No 431
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.41 E-value=6.6e-07 Score=95.57 Aligned_cols=187 Identities=10% Similarity=-0.052 Sum_probs=108.8
Q ss_pred ccccccCCCCCCCCccccCCC----------CCCceeeccCCCc-cceecccCCCCCCcEE-EEEcCCcEEEEEccCCce
Q 005147 497 VRHSQLSSDGRTSKPLVNERS----------SINNLGSKEGYSE-GRRSGWINPFLEGLCK-YLSFSKLRVKADLNQGDL 564 (712)
Q Consensus 497 ~~~~~~~~~g~~~~~~~~~~~----------~~~~~~l~gh~~~-~~~~~~~~~~~~~~~~-~~~~~~~~v~~dl~~~~~ 564 (712)
+.+..|||||+.++....... ......+..+... .....| +.+|... +.+.+....+|++.++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~---spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFI---STDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEE---CTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceE---CCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 556789999987633322110 0111122222222 222456 4455433 444443333488877653
Q ss_pred e----cCCCCeeE-------------------EEEcCCCCEEEEE-----eCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 565 L----NSSNLVCS-------------------LSFDRDGELFAAA-----GVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 565 ~----~h~~~V~~-------------------i~f~~~~~~lat~-----~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
. .+.....+ +.|+|+++.++.+ ..+..|.+||+.++. ......+
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~--------~~~~~~~ 186 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE--------LEVIHQD 186 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC--------EEEEEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc--------EEeeccC
Confidence 2 13333333 3567777766554 356689999986521 1122245
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCC------CcEEEEECCCCcEEEEeccCC--CcEEEEEEecCCCCEEEEEECC-----C
Q 005147 617 RSKLSSICWNSYIKSQIASSNFE------GVVQVWDVSRSQVLTEMREHE--RRVWSIDFSSADPTLLASGSDD-----G 683 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~D------g~V~lwD~~~~~~~~~~~~H~--~~v~sv~fsp~~~~~l~sgs~D-----~ 683 (712)
...+..+.|+|.++..|+..+.+ ..|.+||+..++.. .+..+. ..+..++|+| +++.|+.++.+ +
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIP-DGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECT-TSSCEEEEEEETTTCCE
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECC-CCCEEEEEecCCCCccc
Confidence 66789999999446666665543 36888898766533 343342 3688899998 88877777654 4
Q ss_pred cEEEEeCCCCcEE
Q 005147 684 SVKLWSINQAILL 696 (712)
Q Consensus 684 ~v~lWd~~~~~~v 696 (712)
.|.+||+.+++..
T Consensus 265 ~l~~~d~~~g~~~ 277 (396)
T 3c5m_A 265 VIYKANPETLENE 277 (396)
T ss_dssp EEEEECTTTCCEE
T ss_pred eEEEEECCCCCeE
Confidence 4999999887654
No 432
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.39 E-value=8.6e-07 Score=103.31 Aligned_cols=120 Identities=14% Similarity=0.093 Sum_probs=87.5
Q ss_pred cCCCCeeEEEEcCCCCEEE-----EEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC
Q 005147 566 NSSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~la-----t~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg 640 (712)
+|...+.+++|+|||++|| .|+.+..|++||+.++...... .. .......++|+| ++..|+.++.|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~------~~-~~~~~~~~~wsp-Dg~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD------VI-EGGKYATPKWTP-DSKGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC------CB-SCCTTCCCEECT-TSSEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc------cc-CcccccceEEec-CCCEEEEEEecC
Confidence 3556788999999999988 4445578999999874321000 01 111226899999 689999999887
Q ss_pred c-------------EEEEECCCCc----EEEEeccCCCcEEEEEEecCCCCEEEEEECCC----cEEEEeCCCCc
Q 005147 641 V-------------VQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSDDG----SVKLWSINQAI 694 (712)
Q Consensus 641 ~-------------V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~----~v~lWd~~~~~ 694 (712)
. |.+|++.+++ .+.....|...+.++.|+| ||++|+.++.++ .|.+||..++.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSS
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCc
Confidence 6 9999999876 4444455667899999998 899888887766 67777765554
No 433
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.38 E-value=1e-05 Score=86.15 Aligned_cols=163 Identities=9% Similarity=-0.017 Sum_probs=106.6
Q ss_pred CceeeccCCCccce-----ecccCCCCCCc-EEEEEcCCc--EEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEE
Q 005147 520 NNLGSKEGYSEGRR-----SGWINPFLEGL-CKYLSFSKL--RVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAA 586 (712)
Q Consensus 520 ~~~~l~gh~~~~~~-----~~~~~~~~~~~-~~~~~~~~~--~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~ 586 (712)
+...+..|...... ..| +.||. +.+.+..++ .++ |++.+++.. ++...+.++.|+||++.|+.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~---SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCF---TRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCB---CTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred ceEEecCCcccccchhhcCccC---CCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 34455666554444 556 45554 444444344 344 888877654 244455577899999999999
Q ss_pred eCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEE--cCCCCCEEEEE----------------------eCCCcE
Q 005147 587 GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASS----------------------NFEGVV 642 (712)
Q Consensus 587 ~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--~p~~~~~lasg----------------------s~Dg~V 642 (712)
+.++.|++||+.++.. ......+...+....| +| ++.+++.. +.++.|
T Consensus 99 ~~~~~l~~~d~~~g~~-------~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEE-------NVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp ETTTEEEEEETTTCCE-------EEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred eCCCeEEEEECCCCcc-------eeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 9999999999976321 1112223333434444 77 57777642 245789
Q ss_pred EEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECC------CcEEEEeCCCCc
Q 005147 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD------GSVKLWSINQAI 694 (712)
Q Consensus 643 ~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D------~~v~lWd~~~~~ 694 (712)
.+||+.+++.. .+..+...+..++|+|.|+..|+.++.+ ..|.+||+..+.
T Consensus 171 ~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 171 MRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp EEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred EEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 99999998754 4556778899999997578888877763 378888876543
No 434
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.32 E-value=4.4e-06 Score=85.58 Aligned_cols=144 Identities=10% Similarity=0.004 Sum_probs=103.9
Q ss_pred cEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeC-CCcEEEEEcCCccccCcccccceEE--ecCCCCe
Q 005147 544 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV-NKKIKVFECDAIINENRDIHYPVVE--MASRSKL 620 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~-d~~I~iwD~~~~~~~~~~~~~~~~~--~~~~~~v 620 (712)
.+..++. +++++|.+..+ ....+.++.+.++|+++++.+. +++|..+|... . ......... ..+....
T Consensus 57 ~V~~~d~-~G~~~W~~~~~----~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~G-k---~l~~~~~~~~~~~~~~~~ 127 (276)
T 3no2_A 57 GAKMITR-DGRELWNIAAP----AGCEMQTARILPDGNALVAWCGHPSTILEVNMKG-E---VLSKTEFETGIERPHAQF 127 (276)
T ss_dssp EEEEECT-TSCEEEEEECC----TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTS-C---EEEEEEECCSCSSGGGSC
T ss_pred CEEEECC-CCCEEEEEcCC----CCccccccEECCCCCEEEEecCCCCEEEEEeCCC-C---EEEEEeccCCCCcccccc
Confidence 3555555 67777877653 2346788999999999999887 77777776532 1 000000000 0111234
Q ss_pred EEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 621 ~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
..+++.+ +++++++...++.|.+||.. |+.+.++..+ ..+.++.+.| +++++++++.+++|..+|..+|+.+-++-
T Consensus 128 ~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 128 RQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp SCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred cCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 4566777 69999999999999999998 9999999865 4566788886 89999999999999999999999987774
No 435
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.27 E-value=5.9e-05 Score=85.30 Aligned_cols=149 Identities=11% Similarity=0.055 Sum_probs=101.4
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcC--CccccCcccccceEEec
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD--AIINENRDIHYPVVEMA 615 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~--~~~~~~~~~~~~~~~~~ 615 (712)
....++.+.+++..+++++..+.. ...+..+.|+|||+++++++.|+.|.+||+. +. ..+....
T Consensus 172 ~~~~~~~V~viD~~t~~v~~~i~~------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--------~~v~~i~ 237 (567)
T 1qks_A 172 TLRDAGQIALIDGSTYEIKTVLDT------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--------TTVAEIK 237 (567)
T ss_dssp EETTTTEEEEEETTTCCEEEEEEC------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------CEEEEEE
T ss_pred EeCCCCeEEEEECCCCeEEEEEeC------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--------cEeEEEe
Confidence 334455555555555555554443 3345689999999999999999999999995 31 1222333
Q ss_pred CCCCeEEEEEcC---CCCCEEEEEeC-CCcEEEEECCCCcEEEEecc----------CCC--------------------
Q 005147 616 SRSKLSSICWNS---YIKSQIASSNF-EGVVQVWDVSRSQVLTEMRE----------HER-------------------- 661 (712)
Q Consensus 616 ~~~~v~~v~~~p---~~~~~lasgs~-Dg~V~lwD~~~~~~~~~~~~----------H~~-------------------- 661 (712)
.......++|++ .++++++++++ +++|.++|..+.+++.++.. |..
T Consensus 238 ~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 238 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 344567899993 25777666664 59999999999888776531 111
Q ss_pred -------------------------cEEEEEEecCCCCEEEEEE-CCCcEEEEeCCCCcEEEEEec
Q 005147 662 -------------------------RVWSIDFSSADPTLLASGS-DDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 662 -------------------------~v~sv~fsp~~~~~l~sgs-~D~~v~lWd~~~~~~v~~~~~ 701 (712)
...++.|+| ++.++++++ .+++|.+||+.+++.+..+.-
T Consensus 318 ~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 318 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEecCCCccceeeeeeccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 122457887 788766655 688999999999987766543
No 436
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.26 E-value=1.5e-05 Score=81.86 Aligned_cols=161 Identities=12% Similarity=0.053 Sum_probs=104.3
Q ss_pred ccCCCccceecccCCCCCCc-EEEEEcCCcEEE-EEccCC--ceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCc
Q 005147 525 KEGYSEGRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQG--DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 600 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~--~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~ 600 (712)
..+...+.+..| ..++. +.+.+...+.+. |+..++ .+..+...+.+++|+++|+++++...++.|.+||..++
T Consensus 24 ~~~~~~~eg~~~---d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 24 ADGFTWTEGPVY---VPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp ECCCSSEEEEEE---EGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred ecCCccccCCeE---eCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 344455567777 33443 444444444544 777765 12235677999999999999888777899999998653
Q ss_pred cccCcccccceEEecCCCCeEEEEEcCCCCCEEEEE----eC-------------CCcEEEEECCCCcEEEEeccCCCcE
Q 005147 601 INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS----NF-------------EGVVQVWDVSRSQVLTEMREHERRV 663 (712)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasg----s~-------------Dg~V~lwD~~~~~~~~~~~~H~~~v 663 (712)
..... ...........++.++++| ++++++|. +. .+.|..+|.. ++ +..+..+....
T Consensus 101 ~~~~~---~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~ 174 (296)
T 3e5z_A 101 EWESI---ADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKP 174 (296)
T ss_dssp CEEEE---ECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSE
T ss_pred cEEEE---eeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCC
Confidence 21000 0000001123467899999 58888873 21 2455555554 44 44556677888
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEeCC-CCcE
Q 005147 664 WSIDFSSADPTLLASGSDDGSVKLWSIN-QAIL 695 (712)
Q Consensus 664 ~sv~fsp~~~~~l~sgs~D~~v~lWd~~-~~~~ 695 (712)
+.++|+| +++++++.+.++.|.+||+. ++..
T Consensus 175 ~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 175 NGLAFLP-SGNLLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp EEEEECT-TSCEEEEETTTTEEEEEEECSSSCE
T ss_pred ccEEECC-CCCEEEEeCCCCeEEEEEECCCCcC
Confidence 9999998 88888888889999999997 4543
No 437
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.25 E-value=1.5e-05 Score=81.57 Aligned_cols=148 Identities=9% Similarity=0.000 Sum_probs=110.3
Q ss_pred cCCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
+.+..++.+.+++..+++++|.+..+. ...+.++.++|+|++++ +.++.|..||. ++.. ... .....
T Consensus 9 v~~~~~~~v~~~d~~tG~~~w~~~~~~----~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~-----~W~-~~~~~ 75 (276)
T 3no2_A 9 VGGSGWNKIAIINKDTKEIVWEYPLEK----GWECNSVAATKAGEILF--SYSKGAKMITR-DGRE-----LWN-IAAPA 75 (276)
T ss_dssp EECTTCSEEEEEETTTTEEEEEEECCT----TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCE-----EEE-EECCT
T ss_pred EeeCCCCEEEEEECCCCeEEEEeCCCc----cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCE-----EEE-EcCCC
Confidence 456778888999988899998887532 14678999999999988 35788999997 3211 000 11122
Q ss_pred CCCeEEEEEcCCCCCEEEEEeC-CCcEEEEECCCCcEEEEecc------CCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 617 RSKLSSICWNSYIKSQIASSNF-EGVVQVWDVSRSQVLTEMRE------HERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~-Dg~V~lwD~~~~~~~~~~~~------H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
...+.++.+.| +++++++.+. ++.|..+|. +|+.+.++.. +....+.+++.+ +++++++.+.++.|.+||
T Consensus 76 ~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 76 GCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIA 152 (276)
T ss_dssp TCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEEC
T ss_pred CccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEEC
Confidence 34688899998 6889888877 888888885 7888877752 223456678886 999999999999999999
Q ss_pred CCCCcEEEEEec
Q 005147 690 INQAILLLHLVD 701 (712)
Q Consensus 690 ~~~~~~v~~~~~ 701 (712)
.. |+.+-++-.
T Consensus 153 ~~-G~~~w~~~~ 163 (276)
T 3no2_A 153 PN-GQLLNSVKL 163 (276)
T ss_dssp TT-SCEEEEEEC
T ss_pred CC-CCEEEEEEC
Confidence 98 988876643
No 438
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.25 E-value=1.4e-05 Score=93.25 Aligned_cols=131 Identities=6% Similarity=-0.008 Sum_probs=89.3
Q ss_pred EEccCCceec---CCCCeeEEEEcCCCCEEEEEeCCCc----------------EEEEEcCCccccCcccccceEE-ecC
Q 005147 557 ADLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVNKK----------------IKVFECDAIINENRDIHYPVVE-MAS 616 (712)
Q Consensus 557 ~dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d~~----------------I~iwD~~~~~~~~~~~~~~~~~-~~~ 616 (712)
|++.+++... ....+.+++|+|||+.|+.++.++. |++|++.+..... ..+.. ..+
T Consensus 156 ~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~~v~~~~~~ 231 (710)
T 2xdw_A 156 MKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED----ILCAEFPDE 231 (710)
T ss_dssp EETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC----EEEECCTTC
T ss_pred EECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc----eEEeccCCC
Confidence 5555554331 1122678999999999999888766 9999997632110 11111 224
Q ss_pred CCCeEEEEEcCCCCCEEEEEeC-----CCcEEEEECCC------Cc-EEEEeccCCCcEEEEEEecCCCCEEEEEECC--
Q 005147 617 RSKLSSICWNSYIKSQIASSNF-----EGVVQVWDVSR------SQ-VLTEMREHERRVWSIDFSSADPTLLASGSDD-- 682 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~-----Dg~V~lwD~~~------~~-~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D-- 682 (712)
...+..++|+| ++.+|+.++. +..|.+||+.+ +. .+..+..|...+.. .|+| ++..|+..+.+
T Consensus 232 ~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 232 PKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHS 308 (710)
T ss_dssp TTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEE-ETTEEEEEECTTC
T ss_pred CeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEec-cCCEEEEEECCCC
Confidence 55678999999 5888877765 56899999987 53 46677777777765 4887 77766666553
Q ss_pred --CcEEEEeCCCCc
Q 005147 683 --GSVKLWSINQAI 694 (712)
Q Consensus 683 --~~v~lWd~~~~~ 694 (712)
..|.+||+.++.
T Consensus 309 ~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 309 PNYRLINIDFTDPE 322 (710)
T ss_dssp TTCEEEEEETTSCC
T ss_pred CCCEEEEEeCCCCC
Confidence 369999998764
No 439
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.25 E-value=9.4e-06 Score=85.12 Aligned_cols=123 Identities=15% Similarity=0.191 Sum_probs=82.4
Q ss_pred EEccCCceecCCCCeeEEEEcCCCCEEEEEeCC---Cc--EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCC
Q 005147 557 ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN---KK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631 (712)
Q Consensus 557 ~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d---~~--I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 631 (712)
|++.++....- ..+.++.|+|||+.||.++.+ +. |.+||+.++. ......... +.+++|+| +++
T Consensus 48 ~d~~~~~~~~l-~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wsp-dg~ 116 (347)
T 2gop_A 48 ENLKNNARRFI-ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNE-DSR 116 (347)
T ss_dssp EETTTCCEEEE-ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECT-TSS
T ss_pred EeCCCCceEEc-ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECC-CCC
Confidence 55554432111 567889999999999888754 33 7777775421 111122223 89999999 588
Q ss_pred EEEEEeCC---------------------------CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCC-
Q 005147 632 QIASSNFE---------------------------GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG- 683 (712)
Q Consensus 632 ~lasgs~D---------------------------g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~- 683 (712)
.|+.++.+ ..|.+||+.+++.+..+.. . .+.+++|+| ++ ++++++.+.
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~ 192 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREI 192 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCS
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccc
Confidence 88877642 5699999999887566655 4 888999998 88 888887653
Q ss_pred ------cEEEEeCCCCc
Q 005147 684 ------SVKLWSINQAI 694 (712)
Q Consensus 684 ------~v~lWd~~~~~ 694 (712)
...||.+.+++
T Consensus 193 ~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 193 IPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp SCCSSCCEEEEEEETTE
T ss_pred cccccccccEEEeCCCc
Confidence 44555544443
No 440
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.23 E-value=3.7e-05 Score=78.86 Aligned_cols=156 Identities=11% Similarity=0.072 Sum_probs=101.2
Q ss_pred CCCccceecccCCCCCCcEEEEEcCCcEE-EEEccCCceec--------CCCCeeEEEEcCCCCEEEEEeC---------
Q 005147 527 GYSEGRRSGWINPFLEGLCKYLSFSKLRV-KADLNQGDLLN--------SSNLVCSLSFDRDGELFAAAGV--------- 588 (712)
Q Consensus 527 h~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~dl~~~~~~~--------h~~~V~~i~f~~~~~~lat~~~--------- 588 (712)
+...+.++.+ ..+|.+.++......+ +|+..++.+.. ....+.+++++|+|++++|.+.
T Consensus 67 ~~~~~~~l~~---~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 67 PSHHQNGHCL---NKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG 143 (296)
T ss_dssp SCSSEEEEEE---CTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGS
T ss_pred CCCCcceeeE---CCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccc
Confidence 3334455555 3456555555443444 47776665431 1345678999999999888421
Q ss_pred --------CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECC-CCcE---EEEe
Q 005147 589 --------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS-RSQV---LTEM 656 (712)
Q Consensus 589 --------d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~-~~~~---~~~~ 656 (712)
.+.|..||... .......+....+.++|+| +++.+++.+.++.|.+||+. ++.. ...+
T Consensus 144 ~~~~~~~~~~~l~~~~~~g---------~~~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~ 213 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPDG---------TLSAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHF 213 (296)
T ss_dssp SCCCCCSSSCEEEEECTTS---------CEEEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEE
T ss_pred ccccccCCCcEEEEECCCC---------CEEEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe
Confidence 23444444321 1122234556678999999 57777888888999999997 5554 3444
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 657 ~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
..+...+.++++++ +|.+.++. ++.|.+||.. ++.+..+
T Consensus 214 ~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 214 TVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp CCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred eCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEEEE
Confidence 44566778899997 88877776 8899999987 6666544
No 441
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.22 E-value=9.6e-06 Score=85.04 Aligned_cols=119 Identities=13% Similarity=0.121 Sum_probs=80.3
Q ss_pred EEccCCce-e--cCCCCeeEEEEcCCCCEEEEEeCCC-------cEEEEEcCCccccCcccccceEEecCCCCeEEEEEc
Q 005147 557 ADLNQGDL-L--NSSNLVCSLSFDRDGELFAAAGVNK-------KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (712)
Q Consensus 557 ~dl~~~~~-~--~h~~~V~~i~f~~~~~~lat~~~d~-------~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~ 626 (712)
|++.++.. . ... .+.++.|+|+| ++++++.+. ...||.++++ . ......+ ..+.++ +
T Consensus 157 ~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-----~---~~~l~~~-~~~~~~--s 223 (347)
T 2gop_A 157 FDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-----K---EEKMFEK-VSFYAV--D 223 (347)
T ss_dssp EETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-----E---EEEEEEE-ESEEEE--E
T ss_pred EECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-----c---eEEeccC-cceeeE--C
Confidence 88877764 2 123 78899999999 888876652 4566655421 1 1111122 344444 8
Q ss_pred CCCCCEEEEEeCC--------CcEEEEECCCCcEEEEeccCCCcEEE-EEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 627 SYIKSQIASSNFE--------GVVQVWDVSRSQVLTEMREHERRVWS-IDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 627 p~~~~~lasgs~D--------g~V~lwD~~~~~~~~~~~~H~~~v~s-v~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
| +++.|+.++.+ ..|.+|| +++......+|...+.. +.|+ ++ ++++++.|+.++|| +.+++.
T Consensus 224 p-dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 224 S-DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp E-CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EESSSE
T ss_pred C-CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCce
Confidence 8 58888777644 3688888 66665555667788886 8998 67 99999999999999 876554
No 442
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.20 E-value=1e-05 Score=86.79 Aligned_cols=117 Identities=15% Similarity=0.127 Sum_probs=91.1
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccc----cCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEE
Q 005147 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN----ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (712)
Q Consensus 570 ~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~----~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lw 645 (712)
.++.+++++...+|++|+.+ .+++|++..... .... ..+.....+.. |+.|+| ++++|+++ .+|.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~-~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTP-LTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCC-CCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhcccccc-ccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 68899999999999999987 666799865320 0011 22323445666 999999 58899999 88999999
Q ss_pred ECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 646 D~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
|+++.........|+.++.++.+.+ ++ +++++.||.|.+||+.++...
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~--p~-~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVN--NT-LVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECS--SE-EEEEETTSEEEEEETTTCCEE
T ss_pred EchhhhccCccceeecceeeEEecC--CC-EEEEECCCCEEEEEccCCccc
Confidence 9998877667778889999988875 23 888999999999999987754
No 443
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.18 E-value=1.3e-05 Score=93.43 Aligned_cols=130 Identities=7% Similarity=-0.044 Sum_probs=87.7
Q ss_pred EEccCCcee-c-CCCCe--eEEEEcCCCCEEEEEeCCCc-------------EEEEEcCCccccCcccccceE-EecCCC
Q 005147 557 ADLNQGDLL-N-SSNLV--CSLSFDRDGELFAAAGVNKK-------------IKVFECDAIINENRDIHYPVV-EMASRS 618 (712)
Q Consensus 557 ~dl~~~~~~-~-h~~~V--~~i~f~~~~~~lat~~~d~~-------------I~iwD~~~~~~~~~~~~~~~~-~~~~~~ 618 (712)
|++.++... . +...+ .+++|+|||+.|+.++.|.. |++|++.+..... ..+. ...+..
T Consensus 152 ~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~----~lv~~~~~~~~ 227 (695)
T 2bkl_A 152 IDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD----TVVHERTGDPT 227 (695)
T ss_dssp EETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC----EEEECCCCCTT
T ss_pred EECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc----eEEEecCCCCE
Confidence 666666544 1 22223 68999999999999998876 9999997642211 1111 223456
Q ss_pred CeEEEEEcCCCCCEEEEEeCCC----cEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEE---CCCcEEEEeCC
Q 005147 619 KLSSICWNSYIKSQIASSNFEG----VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS---DDGSVKLWSIN 691 (712)
Q Consensus 619 ~v~~v~~~p~~~~~lasgs~Dg----~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs---~D~~v~lWd~~ 691 (712)
.+.++.|+| ++.+|+.++.++ .|.+||..++. ...+..+...+....|+ ++.+++++. .++.|.+||+.
T Consensus 228 ~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~--~g~l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 228 TFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHAW--KDRFYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp CEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEEE--TTEEEEEECTTCTTCEEEEEBTT
T ss_pred EEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEec--CCcEEEEECCCCCCCEEEEEeCC
Confidence 788999999 588887777665 67777766554 44555666777777774 455555544 26889999998
Q ss_pred CCc
Q 005147 692 QAI 694 (712)
Q Consensus 692 ~~~ 694 (712)
++.
T Consensus 304 ~~~ 306 (695)
T 2bkl_A 304 KPA 306 (695)
T ss_dssp BCS
T ss_pred CCC
Confidence 765
No 444
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.17 E-value=2.6e-05 Score=78.53 Aligned_cols=146 Identities=10% Similarity=0.031 Sum_probs=102.4
Q ss_pred CCCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec
Q 005147 541 LEGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~ 615 (712)
.+|.+.+++...+.+. ++..+.... .....+.+++++++++++++...++.|.+||...... ......
T Consensus 117 ~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-------~~~~~~ 189 (270)
T 1rwi_B 117 TQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-------VVLPFT 189 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-------EECCCS
T ss_pred CCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-------Eeeccc
Confidence 3566666655555544 654433221 1234678999999999888887889999999865211 011112
Q ss_pred CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 616 ~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
....+.+|++++ ++.++++...++.|.+||............+...+.+++++| ++.++++.+.+++|.++++...+.
T Consensus 190 ~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 190 DITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp SCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECT-TCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECC-CCCEEEEECCCCEEEEEcCCCccc
Confidence 235688999998 478888887889999999876544332233446789999997 889999999999999999876554
No 445
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.16 E-value=6.5e-06 Score=96.61 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=81.5
Q ss_pred CCCeeEEEEcCCCCEEEEEeCC-----CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCc-
Q 005147 568 SNLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 641 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d-----~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~- 641 (712)
...+.+++|+|||++||.++.+ ..|++||+.++.. +....+...+..++|+| + +.|+.++.|+.
T Consensus 162 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--------~~~~~~~~~~~~~~wsp-D-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 162 ATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--------LADELKWVKFSGLAWLG-N-DALLYSRFAEPK 231 (741)
T ss_dssp -EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--------EEEEEEEEESCCCEEST-T-SEEEEEECCCC-
T ss_pred CEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--------CCccCCCceeccEEEEC-C-CEEEEEEecCcc
Confidence 3467899999999999887654 4699999977422 11111112245789999 5 77777776654
Q ss_pred -------------EEEEECCCCc----EEEEeccCCCcEEEEEEecCCCCEEEEEECCC-----cEEEEeCCCC
Q 005147 642 -------------VQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSDDG-----SVKLWSINQA 693 (712)
Q Consensus 642 -------------V~lwD~~~~~----~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~-----~v~lWd~~~~ 693 (712)
|.+|++.+++ .+.....|...+.++.|+| ||++|+..+.++ .|.+||+.++
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCC
Confidence 8999998875 3333333445689999998 999888877654 8999999876
No 446
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.16 E-value=6.9e-05 Score=75.29 Aligned_cols=144 Identities=11% Similarity=0.126 Sum_probs=100.0
Q ss_pred CCcEEEEEcCCcEEE-EEccCCcee----cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 542 EGLCKYLSFSKLRVK-ADLNQGDLL----NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 542 ~~~~~~~~~~~~~v~-~dl~~~~~~----~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
+|.+.+... ...+. ++....... .....+.++++++++.++++...++.|.+||..+... .......
T Consensus 77 ~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-------~~~~~~~ 148 (270)
T 1rwi_B 77 AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-------TVLPFTG 148 (270)
T ss_dssp TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-------EECCCCS
T ss_pred CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-------Eeecccc
Confidence 444444444 33333 665543322 2236789999999999888888889999997644211 0111122
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
...+.+++++| +++++++...++.|.+||............+...+.+|+++| ++.++++...++.|.+||......
T Consensus 149 ~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 149 LNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCC
T ss_pred CCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcc
Confidence 34578899998 578888877889999999987765544444457789999997 888888888899999999876443
No 447
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.13 E-value=4.3e-05 Score=79.66 Aligned_cols=120 Identities=13% Similarity=0.034 Sum_probs=88.0
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCC----Cc
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE----GV 641 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~D----g~ 641 (712)
.+...+.+++|++++++++++..++.|.+||..+... ......+...+.+++|+| ++++++++..+ +.
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-------KRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-------EEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCE
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE-------EEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCce
Confidence 4566789999999999888888899999999865211 111124557799999998 57888877766 68
Q ss_pred EEEEECCCCcEEEEec--cCCCcEEEEEEecCCCCEEEEEEC------CCcEEEEeCCCCc
Q 005147 642 VQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSD------DGSVKLWSINQAI 694 (712)
Q Consensus 642 V~lwD~~~~~~~~~~~--~H~~~v~sv~fsp~~~~~l~sgs~------D~~v~lWd~~~~~ 694 (712)
|.+||..++.....+. .+...+++++++| ++.++++.+. .+.|..||..+++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCE
Confidence 9999998876543333 3456799999998 8888887764 2456666665444
No 448
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.12 E-value=4.9e-05 Score=79.70 Aligned_cols=151 Identities=11% Similarity=0.122 Sum_probs=102.1
Q ss_pred CCcEEEEEcC-CcEE-EEEccCCceec---CCCCeeEEEEcCCCCEEEEEeCC----------CcEEEEEcCCccccCcc
Q 005147 542 EGLCKYLSFS-KLRV-KADLNQGDLLN---SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRD 606 (712)
Q Consensus 542 ~~~~~~~~~~-~~~v-~~dl~~~~~~~---h~~~V~~i~f~~~~~~lat~~~d----------~~I~iwD~~~~~~~~~~ 606 (712)
++.+.++++. ...+ ++|+.++++.. ......++.++|+|++++++..+ +.|.+||..+..
T Consensus 140 ~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~----- 214 (328)
T 3dsm_A 140 GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT----- 214 (328)
T ss_dssp TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-----
T ss_pred CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe-----
Confidence 4455555541 3333 37777665442 23345688999999987777654 789999987521
Q ss_pred cccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEE--eccCCCcEEEEEEecCCCCEEEEE----E
Q 005147 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE--MREHERRVWSIDFSSADPTLLASG----S 680 (712)
Q Consensus 607 ~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~--~~~H~~~v~sv~fsp~~~~~l~sg----s 680 (712)
... ............++|+| ++..|+.++. .|.+||..+++.... +..+....+.++++|.++.+.++. +
T Consensus 215 v~~-~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~ 290 (328)
T 3dsm_A 215 VEK-QFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQ 290 (328)
T ss_dssp EEE-EEECCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSS
T ss_pred EEE-EEecCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccc
Confidence 111 11222234688999999 4777776655 899999998875321 222246789999998778888888 7
Q ss_pred CCCcEEEEeCCCCcEEEEEece
Q 005147 681 DDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 681 ~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
.+++|.+||.. ++.+.++--+
T Consensus 291 ~~~~V~v~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 291 QQGIVYRYSPQ-GKLIDEFYVG 311 (328)
T ss_dssp SEEEEEEECTT-CCEEEEEEEE
T ss_pred cCCEEEEECCC-CCEEEEEEec
Confidence 88999999998 8888776533
No 449
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.10 E-value=4e-05 Score=81.65 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=97.1
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccc
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYP 610 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~ 610 (712)
.++.+.+++..+++++..+..+ ..+ .+.|+||+++++++. .++.|.+||..+... ...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g-----~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~-----~~~ 96 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTA-----FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF-----EKE 96 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECC-----EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE-----EEE
T ss_pred ccCeEEEEECCCCeEEEEecCC-----CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE-----EEE
Confidence 3556666665566555443332 233 899999999888876 367899999875211 111
Q ss_pred eEEe----cCCCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECCCCcEEEE-eccCCCcEEEEEEecCCCCEEEEEECCC
Q 005147 611 VVEM----ASRSKLSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDG 683 (712)
Q Consensus 611 ~~~~----~~~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~~~~~~~~-~~~H~~~v~sv~fsp~~~~~l~sgs~D~ 683 (712)
+... .+......++++| ++++|+++++ +++|.+||+.+++.+.+ +.. ...+.+.+.|..+..+++.+.||
T Consensus 97 i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg 173 (361)
T 2oiz_A 97 ISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDG 173 (361)
T ss_dssp EEECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTEEEEEECTTSSSEEEEEETTS
T ss_pred EEcCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCcceeEEcCCCCeeEEEECCCC
Confidence 1111 1234567899999 5888888875 58999999999999888 653 33456778885557889999999
Q ss_pred cEEEEeCCC-CcEE
Q 005147 684 SVKLWSINQ-AILL 696 (712)
Q Consensus 684 ~v~lWd~~~-~~~v 696 (712)
++.+|++.. ++..
T Consensus 174 ~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 174 GLLTINLGEDGKVA 187 (361)
T ss_dssp SEEEEEECTTSSEE
T ss_pred cEEEEEECCCCcEe
Confidence 999999865 4443
No 450
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.02 E-value=0.00013 Score=75.08 Aligned_cols=145 Identities=13% Similarity=0.142 Sum_probs=95.1
Q ss_pred CcEEEEEcCCcEEEEEccCCceec---------CCCCeeEEEEcCCCCEEEEEeCC---------------CcEEEEEcC
Q 005147 543 GLCKYLSFSKLRVKADLNQGDLLN---------SSNLVCSLSFDRDGELFAAAGVN---------------KKIKVFECD 598 (712)
Q Consensus 543 ~~~~~~~~~~~~v~~dl~~~~~~~---------h~~~V~~i~f~~~~~~lat~~~d---------------~~I~iwD~~ 598 (712)
|.+.++....+..+|+.. +++.. ....+.++.++++|+++++...+ +.|..||..
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred CcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 554555544444446665 44321 12457899999999988887655 456666542
Q ss_pred CccccCcccccceEEecCCCCeEEEEEc----CCCCCE-EEEEeCCCcEEEEECC-CCc-----EEEEeccCC-CcEEEE
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWN----SYIKSQ-IASSNFEGVVQVWDVS-RSQ-----VLTEMREHE-RRVWSI 666 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~----p~~~~~-lasgs~Dg~V~lwD~~-~~~-----~~~~~~~H~-~~v~sv 666 (712)
. . ......+......++|+ | +++. +++...++.|.+||.. +++ .+..+..+. ..+..+
T Consensus 162 g--------~-~~~~~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 162 G--------Q-MIQVDTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp S--------C-EEEEEEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred C--------C-EEEeccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 1 0 11112223456789999 8 4654 4555678999999986 454 334455554 678899
Q ss_pred EEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 667 DFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 667 ~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
++++ ++.+.++...++.|.+||..+++.+..+
T Consensus 232 ~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 232 DFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp EEBT-TCCEEEEEETTTEEEEECTTCBSCSEEE
T ss_pred EECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEE
Confidence 9997 8999999888999999999877655443
No 451
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.02 E-value=5.7e-05 Score=79.15 Aligned_cols=143 Identities=7% Similarity=-0.006 Sum_probs=94.7
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC----
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---- 616 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~---- 616 (712)
.++.+.+++..+++++..+. .......++|++++.++++...++.|.+||..+... .. ....+.
T Consensus 62 ~~~~v~viD~~t~~~~~~i~------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-----~~-~i~~g~~~~~ 129 (328)
T 3dsm_A 62 NSHVIFAIDINTFKEVGRIT------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI-----TG-YIECPDMDME 129 (328)
T ss_dssp GGTEEEEEETTTCCEEEEEE------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE-----EE-EEECTTCCTT
T ss_pred CCCEEEEEECcccEEEEEcC------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE-----EE-EEEcCCcccc
Confidence 34444444444444443331 346678999999886666665899999999976311 10 111111
Q ss_pred CCCeEEEEEcCCCCCEEEEEe-CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECC----------CcE
Q 005147 617 RSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD----------GSV 685 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs-~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D----------~~v 685 (712)
......+++. .+.++++.. .++.|.+||..+++.+.++... .....+.++| ++.+++++..+ +.|
T Consensus 130 ~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 130 SGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp TCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred CCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcC-CCCEEEEECCCccCCccccCCceE
Confidence 1145567772 344444443 4899999999999988887653 3456899997 88888877665 799
Q ss_pred EEEeCCCCcEEEEE
Q 005147 686 KLWSINQAILLLHL 699 (712)
Q Consensus 686 ~lWd~~~~~~v~~~ 699 (712)
.+||..+++.+..+
T Consensus 206 ~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 206 YRIDAETFTVEKQF 219 (328)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEE
Confidence 99999998876554
No 452
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.96 E-value=9.8e-06 Score=86.33 Aligned_cols=121 Identities=11% Similarity=-0.017 Sum_probs=83.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCC---CcEEEEEcCCccccCcccccceEEecCCCC-eEEEEEcCCCCCEEEEEeCCCcE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMASRSK-LSSICWNSYIKSQIASSNFEGVV 642 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d---~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~-v~~v~~~p~~~~~lasgs~Dg~V 642 (712)
|...+.+++|+|||+.|+.++.. ..|.+||+.++.. .....+... ...+.|+| +++.|+.++.++.|
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~--------~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l 104 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA--------VQLTEGKGDNTFGGFIST-DERAFFYVKNELNL 104 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE--------EECCCSSCBCTTTCEECT-TSSEEEEEETTTEE
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE--------EEeecCCCCccccceECC-CCCEEEEEEcCCcE
Confidence 44557888999999998877543 4688888865211 111122222 23478999 69999999999999
Q ss_pred EEEECCCCcEEEEeccCCCcEEE-------------------EEEecCCCCEEEEE-----ECCCcEEEEeCCCCcEEE
Q 005147 643 QVWDVSRSQVLTEMREHERRVWS-------------------IDFSSADPTLLASG-----SDDGSVKLWSINQAILLL 697 (712)
Q Consensus 643 ~lwD~~~~~~~~~~~~H~~~v~s-------------------v~fsp~~~~~l~sg-----s~D~~v~lWd~~~~~~v~ 697 (712)
.+||+.+++....+..+...... ++|+| ++..++.+ ..+..|.+||+.+++...
T Consensus 105 ~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (396)
T 3c5m_A 105 MKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEV 182 (396)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEE
T ss_pred EEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEe
Confidence 99999998876666655554333 35666 66655544 457789999999877543
No 453
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.95 E-value=8.4e-05 Score=87.08 Aligned_cols=129 Identities=12% Similarity=0.091 Sum_probs=85.6
Q ss_pred EEccCCceec-C--CCCeeEEEEcCCCCEEEEEeCCCc--------------EEEEEcCCccccCcccccceEE-ecCCC
Q 005147 557 ADLNQGDLLN-S--SNLVCSLSFDRDGELFAAAGVNKK--------------IKVFECDAIINENRDIHYPVVE-MASRS 618 (712)
Q Consensus 557 ~dl~~~~~~~-h--~~~V~~i~f~~~~~~lat~~~d~~--------------I~iwD~~~~~~~~~~~~~~~~~-~~~~~ 618 (712)
|++.+++... + ...+.+++|+|| +.|+.++.++. |++|++.+..... ..+.. ..+..
T Consensus 194 ~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----~lv~~~~~~~~ 268 (741)
T 1yr2_A 194 VGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD----QPVFATPELPK 268 (741)
T ss_dssp EETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC----EEEECCTTCTT
T ss_pred EECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC----EEEeccCCCCe
Confidence 6666665432 1 112357899999 98888887654 8999986632111 11111 12233
Q ss_pred CeEEEEEcCCCCCEEEEEeCCC-----cEEEEECCCC--cEEEEeccCCCcEEEEEEecCCCCEEEEEECC----CcEEE
Q 005147 619 KLSSICWNSYIKSQIASSNFEG-----VVQVWDVSRS--QVLTEMREHERRVWSIDFSSADPTLLASGSDD----GSVKL 687 (712)
Q Consensus 619 ~v~~v~~~p~~~~~lasgs~Dg-----~V~lwD~~~~--~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D----~~v~l 687 (712)
.+.++.|+| ++.+|+.++.++ .|.+||+.++ .+...+..+...+.... +| ++..|+..+.+ +.|.+
T Consensus 269 ~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 269 RGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp CEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EE-ETTEEEEEECTTCTTCEEEE
T ss_pred EEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-ec-cCCEEEEEECCCCCCCEEEE
Confidence 588999999 688888777554 7999999887 42556666666666554 46 78877777764 45999
Q ss_pred EeCCCC
Q 005147 688 WSINQA 693 (712)
Q Consensus 688 Wd~~~~ 693 (712)
||+.++
T Consensus 346 ~d~~~~ 351 (741)
T 1yr2_A 346 VDLSGS 351 (741)
T ss_dssp EECSSS
T ss_pred EeCCCC
Confidence 999875
No 454
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.92 E-value=5e-06 Score=84.21 Aligned_cols=84 Identities=14% Similarity=-0.027 Sum_probs=60.1
Q ss_pred CCCcccccccccccccccCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh----------------
Q 005147 37 HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS---------------- 100 (712)
Q Consensus 37 H~ni~~~~~~~~~~~~~~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs---------------- 100 (712)
+.++..+++ ++. .....+++++.+.|.+|.+.+. +......++.++.++|..||+
T Consensus 69 ~~~vP~v~~-~~~--~~~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~ 139 (263)
T 3tm0_A 69 KLPVPKVLH-FER--HDGWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRL 139 (263)
T ss_dssp TSCCCCEEE-EEE--ETTEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHH
T ss_pred CCCCCeEEE-EEe--cCCceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHH
Confidence 555666665 332 1223344444458999988641 233455788999999999999
Q ss_pred -------------------------------------------cCceeccCCCCceeecCCCcEEEEecccc
Q 005147 101 -------------------------------------------QGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 101 -------------------------------------------~gIvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
.+++|+|++|.||+++..+.+.+|||+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 140 AELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp HHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred HHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 56999999999999986555679999876
No 455
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.90 E-value=0.00097 Score=67.54 Aligned_cols=118 Identities=13% Similarity=0.045 Sum_probs=88.2
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
...+.++++++++.++++...++.|..||.... ............+.++++.| ++.++++...++.|..||.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-------~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGI-------IKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD 127 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-------EEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-------EEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC
Confidence 567899999999998888777889999997421 01111112455788999998 5788888888899999999
Q ss_pred CCCcEEE-EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 648 SRSQVLT-EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 648 ~~~~~~~-~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+++... ....+...+.+++++| ++.+.++...++.|..||. +++..
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEE
T ss_pred -CCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 665433 2334556789999997 8888888777899999999 66544
No 456
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.88 E-value=0.00016 Score=81.78 Aligned_cols=114 Identities=8% Similarity=-0.024 Sum_probs=88.6
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECC--CCcEEEE
Q 005147 578 RDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS--RSQVLTE 655 (712)
Q Consensus 578 ~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~--~~~~~~~ 655 (712)
+.+.++++...+++|.+||..+. ..+........+.++.|+| +++++++++.|+.|.+||+. +++.+.+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCC--------eEEEEEeCCCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEE
Confidence 44557788888999999999762 1233344455677999999 69999999999999999996 8888888
Q ss_pred eccCCCcEEEEEEec---CCCCEEEEEEC-CCcEEEEeCCCCcEEEEEec
Q 005147 656 MREHERRVWSIDFSS---ADPTLLASGSD-DGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 656 ~~~H~~~v~sv~fsp---~~~~~l~sgs~-D~~v~lWd~~~~~~v~~~~~ 701 (712)
+... .....++|+| .||++++.++. +++|.++|..+.+.+..+.-
T Consensus 236 i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 236 IKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp EECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred EecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 8753 3457899993 28887776664 79999999999998877653
No 457
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.85 E-value=0.00028 Score=72.43 Aligned_cols=120 Identities=7% Similarity=0.074 Sum_probs=87.4
Q ss_pred CCCeeEEEEc----CCCCEE-EEEeCCCcEEEEEcCC-ccccCcccccceEEe-cCC-CCeEEEEEcCCCCCEEEEEeCC
Q 005147 568 SNLVCSLSFD----RDGELF-AAAGVNKKIKVFECDA-IINENRDIHYPVVEM-ASR-SKLSSICWNSYIKSQIASSNFE 639 (712)
Q Consensus 568 ~~~V~~i~f~----~~~~~l-at~~~d~~I~iwD~~~-~~~~~~~~~~~~~~~-~~~-~~v~~v~~~p~~~~~lasgs~D 639 (712)
.....+++|+ |+++.+ ++...++.|.+||+.. +.. ......... .+. ..+..+++++ +++++++...+
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~---~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~ 246 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---ENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGS 246 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---EEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETT
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc---ccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCC
Confidence 3456889999 999654 5555689999999752 100 000011111 222 5578899998 58888888888
Q ss_pred CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC-EEEEEECCCcEEEEeCCC
Q 005147 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 640 g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l~sgs~D~~v~lWd~~~ 692 (712)
+.|.+||..+++.+..+..+...+.+++|+| ++. ++++.+.++.|..|++..
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP-QTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEEEECT-TSSEEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeEEECC-CCCEEEEEeCCCCeEEEEeCCC
Confidence 9999999988887777777778999999997 888 556666678999999875
No 458
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.78 E-value=0.0013 Score=67.41 Aligned_cols=150 Identities=11% Similarity=0.044 Sum_probs=95.6
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceec--------CCCCeeEEEEcCCCCEEEEEeCC---------CcEEEEEcCCcccc
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLN--------SSNLVCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINE 603 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~--------h~~~V~~i~f~~~~~~lat~~~d---------~~I~iwD~~~~~~~ 603 (712)
.+|.+.+.. ..+..+++..++.+.. ....+.++.++|+|+++++.... ....||.+....
T Consensus 63 ~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-- 139 (297)
T 3g4e_A 63 QSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-- 139 (297)
T ss_dssp TTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS--
T ss_pred CCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC--
Confidence 344433333 3333446666554321 12457899999999977765322 345666664310
Q ss_pred CcccccceEEecCCCCeEEEEEcCCCCC-EEEEEeCCCcEEEEEC--CCCcE-----EEEeccCCCcEEEEEEecCCCCE
Q 005147 604 NRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGVVQVWDV--SRSQV-----LTEMREHERRVWSIDFSSADPTL 675 (712)
Q Consensus 604 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~-~lasgs~Dg~V~lwD~--~~~~~-----~~~~~~H~~~v~sv~fsp~~~~~ 675 (712)
. .......-...+.++|+|+ ++ ++++.+.++.|.+||+ .++.. +..+..+......+++++ +|.+
T Consensus 140 ----~-~~~~~~~~~~pngi~~spd-g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~l 212 (297)
T 3g4e_A 140 ----H-VKKYFDQVDISNGLDWSLD-HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKL 212 (297)
T ss_dssp ----C-EEEEEEEESBEEEEEECTT-SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCE
T ss_pred ----C-EEEEeeccccccceEEcCC-CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCE
Confidence 0 1111222345678999994 65 4566667899999997 45542 334444556788999997 8998
Q ss_pred EEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 676 LASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 676 l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.++...++.|.+||..+++.+..+-
T Consensus 213 wva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 213 WVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp EEEEETTTEEEEECTTTCCEEEEEE
T ss_pred EEEEcCCCEEEEEcCCCceEEEEEE
Confidence 8888888999999999888776553
No 459
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.76 E-value=0.0023 Score=64.67 Aligned_cols=118 Identities=8% Similarity=-0.053 Sum_probs=88.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 567 h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
....+.++.+++++.++++...++.|.+||. ++.. ...........+.++++.+ ++.++++...++.|..||
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~------~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI------REYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRIT 168 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE------EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEEC
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE------EEecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEc
Confidence 3567899999999998888878889999997 3110 0111122345688999998 478888777788999999
Q ss_pred CCCCcEEEE-eccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 647 VSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 647 ~~~~~~~~~-~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
. +++.... +..+...+.+++++| ++.+.++...++.|.+||. ++..
T Consensus 169 ~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 169 E-SGDITEFKIPTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEI 215 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCE
T ss_pred C-CCcEEEeeCCCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcE
Confidence 9 7765432 344556789999997 7888887777899999999 6654
No 460
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.75 E-value=0.00062 Score=72.62 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=95.1
Q ss_pred CCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccce
Q 005147 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPV 611 (712)
Q Consensus 542 ~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~~ 611 (712)
++.+.+.+..+++++..+..|. .+ .+.++|||+++.++. .++.|.+||..+.. ....+
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~-----~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~-----v~~~I 125 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGF-----LP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL-----PTADI 125 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-----EEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCC-----CC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe-----EEEEE
Confidence 4677788888888887776542 23 499999999776654 46789999997621 11111
Q ss_pred EEecC------CCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCC
Q 005147 612 VEMAS------RSKLSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683 (712)
Q Consensus 612 ~~~~~------~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~ 683 (712)
..+. ......+.|+| ++++++.++. ++.|.++|+.+++.+.++.-- .+ ..+.|.....+++.+.||
T Consensus 126 -~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g~--~~~~P~g~~~~~~~~~DG 199 (386)
T 3sjl_D 126 -ELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--DC--YHIFPTAPDTFFMHCRDG 199 (386)
T ss_dssp -EETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--SE--EEEEEEETTEEEEEETTS
T ss_pred -ECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--Cc--ceeecCCCceeEEECCCC
Confidence 1111 12456799999 5887777764 689999999999999988532 22 223354567788888999
Q ss_pred cEEEEeCCC-CcE
Q 005147 684 SVKLWSINQ-AIL 695 (712)
Q Consensus 684 ~v~lWd~~~-~~~ 695 (712)
++-+.++.. ++.
T Consensus 200 ~~~~v~~~~~g~v 212 (386)
T 3sjl_D 200 SLAKVAFGTEGTP 212 (386)
T ss_dssp CEEEEECCSSSCC
T ss_pred CEEEEECCCCCeE
Confidence 999999976 554
No 461
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=97.71 E-value=2.7e-05 Score=82.79 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=67.5
Q ss_pred cceeeccCC--CCCcccccccccccccc-cCceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh----
Q 005147 28 DGVELTHGD--HLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS---- 100 (712)
Q Consensus 28 ~~~~l~~~~--H~ni~~~~~~~~~~~~~-~~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs---- 100 (712)
+..++..+. +.++.+++. ++.+... ...|++++++.|..|.+.. ...++..+...++.++++.|..||+
T Consensus 86 E~~~l~~L~~~~vpvP~~~~-~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~ 161 (359)
T 3dxp_A 86 EYRVMDALAGTDVPVAKMYA-LCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQ 161 (359)
T ss_dssp HHHHHHHHTTSSSCCCCEEE-EECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHhhcCCCCCCcEEE-ECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCch
Confidence 334444443 344566555 4433322 2244444445787775422 1236788889999999999999997
Q ss_pred ------------------------------------------------------cCceeccCCCCceeecCCCc--EEEE
Q 005147 101 ------------------------------------------------------QGIVVHNVRPSCFVMSSFNH--VSFI 124 (712)
Q Consensus 101 ------------------------------------------------------~gIvHrDLkP~NIll~~~~~--vkl~ 124 (712)
.+++|+|++|.||+++.++. +.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~vi 241 (359)
T 3dxp_A 162 AIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVL 241 (359)
T ss_dssp TTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEEC
T ss_pred hccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEE
Confidence 46999999999999997653 6899
Q ss_pred eccccc
Q 005147 125 ESASCS 130 (712)
Q Consensus 125 dfg~~~ 130 (712)
||+.+.
T Consensus 242 Dwe~a~ 247 (359)
T 3dxp_A 242 DWELST 247 (359)
T ss_dssp CCTTCE
T ss_pred Cccccc
Confidence 999873
No 462
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.71 E-value=0.00011 Score=85.42 Aligned_cols=129 Identities=17% Similarity=0.208 Sum_probs=84.8
Q ss_pred EEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe-----CCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCC
Q 005147 554 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-----VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY 628 (712)
Q Consensus 554 ~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~-----~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~ 628 (712)
.++.|...-. .+|...+.+++|+|||++||-+. ....|++||+.++.. +.......+..+++|+
T Consensus 115 ~vllD~n~la-~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~--------~~~~~~~~k~~~~~Ws-- 183 (693)
T 3iuj_A 115 EVFLDPNTLS-PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP--------LETPLKDVKFSGISWL-- 183 (693)
T ss_dssp EEEECGGGGS-TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE--------EEEEEEEEESCCCEEE--
T ss_pred EEEEehhhcc-CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC--------CccccCCceeccEEEe--
Confidence 4555554311 12556788999999999888533 335799999987421 1111111123578999
Q ss_pred CCCEEEEEeCCCc-------------EEEEECCCCc----EEEEecc-CCCcEEEEEEecCCCCEEEEEE-C---CCcEE
Q 005147 629 IKSQIASSNFEGV-------------VQVWDVSRSQ----VLTEMRE-HERRVWSIDFSSADPTLLASGS-D---DGSVK 686 (712)
Q Consensus 629 ~~~~lasgs~Dg~-------------V~lwD~~~~~----~~~~~~~-H~~~v~sv~fsp~~~~~l~sgs-~---D~~v~ 686 (712)
+++.|+.++.+.. |.+|++.+++ .+..... |...+.++.|+| |+++|+..+ . +..|.
T Consensus 184 Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~ 262 (693)
T 3iuj_A 184 GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLY 262 (693)
T ss_dssp TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEE
T ss_pred CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEE
Confidence 4788888877743 9999998765 3444444 666788999998 888764433 2 35899
Q ss_pred EEeCCCCc
Q 005147 687 LWSINQAI 694 (712)
Q Consensus 687 lWd~~~~~ 694 (712)
+||+.++.
T Consensus 263 ~~d~~~~~ 270 (693)
T 3iuj_A 263 VKDLSQEN 270 (693)
T ss_dssp EEETTSTT
T ss_pred EEECCCCC
Confidence 99998764
No 463
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.63 E-value=6.5e-06 Score=88.13 Aligned_cols=143 Identities=11% Similarity=0.092 Sum_probs=71.4
Q ss_pred CCCCCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCC
Q 005147 538 NPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 617 (712)
Q Consensus 538 ~~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~ 617 (712)
.+..++.+..++..+++++|.... +.+.+..+..++..+++++.|+.|+.||..++...... ..........
T Consensus 14 ~gs~dg~v~a~d~~tG~~~W~~~~-------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~~~~~~~ 85 (369)
T 2hz6_A 14 VSTLDGSLHAVSKRTGSIKWTLKE-------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL-PFTIPELVQA 85 (369)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC-------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC-SCCHHHHHTT
T ss_pred EEcCCCEEEEEECCCCCEEEEecC-------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee-eccCcccccc
Confidence 345677778888888888887764 23333444556778888889999999999764321100 0000000011
Q ss_pred CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEE
Q 005147 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLL 697 (712)
Q Consensus 618 ~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~ 697 (712)
+++ +. .+..+++|+.|+.|..||..+|+.+.++..+. .+.++| ++..+++|+.|+.|..||.++|+.+-
T Consensus 86 sp~----~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 86 SPC----RS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP-STSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp CSC----C-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred Cce----Ee--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-cCCEEEEEecCCEEEEEECCCCCEEE
Confidence 111 11 24577888899999999999999998887654 245677 78889999999999999999998654
Q ss_pred EE
Q 005147 698 HL 699 (712)
Q Consensus 698 ~~ 699 (712)
++
T Consensus 155 ~~ 156 (369)
T 2hz6_A 155 NA 156 (369)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 464
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.61 E-value=0.0015 Score=70.71 Aligned_cols=152 Identities=8% Similarity=-0.046 Sum_probs=98.9
Q ss_pred ceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee---cCCCCeeEEEEcCCCCEEEEEeCCC--cEEEEEcCCccccCc
Q 005147 532 RRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL---NSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENR 605 (712)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~---~h~~~V~~i~f~~~~~~lat~~~d~--~I~iwD~~~~~~~~~ 605 (712)
.++.| ..++.+.+++....++. |++.++.+. ....... ++|+++++.++++..++ .|.+||......
T Consensus 134 ~~la~---d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~--- 206 (409)
T 3hrp_A 134 WGIAA---VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA--- 206 (409)
T ss_dssp EEEEE---CSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC---
T ss_pred eEEEE---eCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce---
Confidence 34555 35666666666556655 888766543 2233334 99999999888888766 788888754211
Q ss_pred ccccce-EEec-CCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEE----eccCCCcE--EEEEEecCCCCEEE
Q 005147 606 DIHYPV-VEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE----MREHERRV--WSIDFSSADPTLLA 677 (712)
Q Consensus 606 ~~~~~~-~~~~-~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~----~~~H~~~v--~sv~fsp~~~~~l~ 677 (712)
.... .... ....+.+++++|.++.++ .++.++.|..||..++..... ..++...- ..++|+|.++.+++
T Consensus 207 --~~~~g~~~~~~~~~p~~iav~p~~g~ly-v~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 207 --PTRIGQLGSTFSGKIGAVALDETEEWLY-FVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp --EEEEEECCTTSCSCCCBCEECTTSSEEE-EECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred --eEEeeeccchhcCCcEEEEEeCCCCeEE-EEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 0000 0012 345678999999545544 477889999999987764322 22232222 38999986688888
Q ss_pred EEECCCcEEEEeCCCC
Q 005147 678 SGSDDGSVKLWSINQA 693 (712)
Q Consensus 678 sgs~D~~v~lWd~~~~ 693 (712)
+-+.+++|..|+....
T Consensus 284 ~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE 299 (409)
T ss_dssp EETTTTEEEEECTTCC
T ss_pred EeCCCCEEEEEecCCC
Confidence 8888999999998643
No 465
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.59 E-value=0.0034 Score=65.33 Aligned_cols=154 Identities=10% Similarity=0.027 Sum_probs=93.9
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEEEEccCCcee---c-----CCCCeeEEEEcCCCCEEEEEeCC----CcEEEEEcC
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLL---N-----SSNLVCSLSFDRDGELFAAAGVN----KKIKVFECD 598 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~~dl~~~~~~---~-----h~~~V~~i~f~~~~~~lat~~~d----~~I~iwD~~ 598 (712)
+.++.| ..+|.+.+.. ..+..+++..++.+. . ....+.++.++|+|+++++...+ ....||.+.
T Consensus 92 v~~i~~---~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 92 GSALAK---ISDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp EEEEEE---EETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred ceEEEE---eCCCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 344444 3445444443 334444776665532 1 12458899999999977765422 234455443
Q ss_pred CccccCcccccceEEecCCCCeEEEEEcCCCCCEE-EEEeCCCcEEEEECC--CC-c-----EEEEeccCCCcEEEEEEe
Q 005147 599 AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVS--RS-Q-----VLTEMREHERRVWSIDFS 669 (712)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-asgs~Dg~V~lwD~~--~~-~-----~~~~~~~H~~~v~sv~fs 669 (712)
++. . ..........+.++|+| +++.+ ++.+.++.|.+||+. ++ . .+..+..+.....++++.
T Consensus 168 ~g~-----~---~~~~~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d 238 (326)
T 2ghs_A 168 KGK-----V---TKLFADISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD 238 (326)
T ss_dssp TTE-----E---EEEEEEESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC
T ss_pred CCc-----E---EEeeCCCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEEC
Confidence 210 0 11112223567899999 46655 555567899999986 55 3 234444455677889999
Q ss_pred cCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 670 SADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 670 p~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+ ++.+.++...++.|.+||. +++.+..+
T Consensus 239 ~-~G~lwva~~~~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 239 A-EGHIWNARWGEGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp T-TSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred C-CCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence 6 8888888777889999998 56665544
No 466
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.52 E-value=0.0012 Score=67.89 Aligned_cols=152 Identities=10% Similarity=0.036 Sum_probs=93.7
Q ss_pred cceecccCCCCCCc-EEEEEcCCcEEE-EEccCCce---ecCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc
Q 005147 531 GRRSGWINPFLEGL-CKYLSFSKLRVK-ADLNQGDL---LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (712)
Q Consensus 531 ~~~~~~~~~~~~~~-~~~~~~~~~~v~-~dl~~~~~---~~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~ 605 (712)
+.+..| ..++. +.+.+...+++. |+. ++.. ..+...+.++.|+++|+++++...++.|.+||... ..
T Consensus 47 ~egp~~---~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g-~~--- 118 (305)
T 3dr2_A 47 SEGPAW---WEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADG-QA--- 118 (305)
T ss_dssp EEEEEE---EGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CE---
T ss_pred ccCCeE---eCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCC-CE---
Confidence 345566 23333 334444444544 655 3332 23567789999999999877766678899999742 10
Q ss_pred ccccceEEecCCCCeEEEEEcCCCCCEEEE----EeC-------------CCcEEEEECCCCcEEEEeccCCCcEEEEEE
Q 005147 606 DIHYPVVEMASRSKLSSICWNSYIKSQIAS----SNF-------------EGVVQVWDVSRSQVLTEMREHERRVWSIDF 668 (712)
Q Consensus 606 ~~~~~~~~~~~~~~v~~v~~~p~~~~~las----gs~-------------Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~f 668 (712)
..............+++++++| ++++++| |.. .+.|..||..+++..... +....+.++|
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF 195 (305)
T ss_dssp EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence 0000000001123467899999 5888886 332 256888888777654333 4456789999
Q ss_pred ecCCCCEEEEEECC------CcEEEEeCCCCc
Q 005147 669 SSADPTLLASGSDD------GSVKLWSINQAI 694 (712)
Q Consensus 669 sp~~~~~l~sgs~D------~~v~lWd~~~~~ 694 (712)
+| |+..|+.+..+ +.|.+||+..+.
T Consensus 196 sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 196 SP-DEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp CT-TSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cC-CCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 98 88866666554 789999987654
No 467
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.52 E-value=0.0033 Score=64.43 Aligned_cols=154 Identities=11% Similarity=0.098 Sum_probs=95.9
Q ss_pred CccceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee--cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCc
Q 005147 529 SEGRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL--NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (712)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~--~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~ 605 (712)
.-+.+..| ++ .++.+.+.+....++. |+..++... .....+.++.|+++++++++. +..|.+||..+...
T Consensus 13 ~~~Egp~w-~~-~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~--- 85 (297)
T 3g4e_A 13 RCGESPVW-EE-VSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSA--- 85 (297)
T ss_dssp SBEEEEEE-ET-TTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEE---
T ss_pred ccccCCeE-EC-CCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcE---
Confidence 34556777 22 2455555565556655 888766532 346789999999999966654 67899999865211
Q ss_pred ccccceEEec---CCCCeEEEEEcCCCCCEEEEEeCC---------CcEEEEECCCCcEEEEeccCCCcEEEEEEecCCC
Q 005147 606 DIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFE---------GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673 (712)
Q Consensus 606 ~~~~~~~~~~---~~~~v~~v~~~p~~~~~lasgs~D---------g~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~ 673 (712)
..+.... ....++.++++| +++++++...+ ..-.||.+.....+..+..+-...+.++|+| ++
T Consensus 86 ---~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~sp-dg 160 (297)
T 3g4e_A 86 ---VVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSL-DH 160 (297)
T ss_dssp ---EEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECT-TS
T ss_pred ---EEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcC-CC
Confidence 0111111 123478899999 57777655332 2345555543222333334456678999998 77
Q ss_pred C-EEEEEECCCcEEEEeC--CCCc
Q 005147 674 T-LLASGSDDGSVKLWSI--NQAI 694 (712)
Q Consensus 674 ~-~l~sgs~D~~v~lWd~--~~~~ 694 (712)
+ ++++.+.++.|.+||+ .++.
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQ 184 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCC
T ss_pred CEEEEecCCCCcEEEEeccCCCCc
Confidence 6 4566677899999987 4554
No 468
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.51 E-value=0.0093 Score=60.13 Aligned_cols=118 Identities=11% Similarity=-0.019 Sum_probs=87.0
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
...+.++.+++++.++++...++.|..||... .. ...........+.++++.+ ++.++++...++.|..||.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g-~~------~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKG-GF------TEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTS-CE------EEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCCC-Ce------EEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECC
Confidence 46789999999999888877788999999752 11 1111112346688999998 5788888777889999998
Q ss_pred CCCcEEE-EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 648 SRSQVLT-EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 648 ~~~~~~~-~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
. ++... .+......+.++++.| ++.+.++...++.|..||. +++..
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGS-DNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEE
T ss_pred C-CCEEEccCCCCCCCceeEEECC-CCCEEEEecCCCeEEEECC-CCcEE
Confidence 7 65442 2343456789999997 8888887777889999998 55544
No 469
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.51 E-value=3.8e-05 Score=77.15 Aligned_cols=27 Identities=7% Similarity=0.106 Sum_probs=24.1
Q ss_pred ceeccCCCCceeecCCCcEEEEecccc
Q 005147 103 IVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 103 IvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
++|+|++|.||+++.++.+.++||+.+
T Consensus 186 l~HgDl~~~Nil~~~~~~~~liD~~~a 212 (264)
T 1nd4_A 186 VTHGDACLPNIMVENGRFSGFIDCGRL 212 (264)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred EECCCCCCCcEEEECCcEEEEEcchhc
Confidence 999999999999987666679999987
No 470
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.49 E-value=0.0039 Score=66.47 Aligned_cols=138 Identities=11% Similarity=0.018 Sum_probs=90.1
Q ss_pred cEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccc-eE
Q 005147 544 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYP-VV 612 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~-~~ 612 (712)
.+.+++..+++++..+..| ..+ .+.|+||++.+..+. .++.|.+||..+...... +..+ ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g-----~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~-i~~~~~~ 119 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG-----FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIAD-IELPDAP 119 (373)
T ss_pred EEEEEECCCCeEEEEecCC-----CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEE-EECCCcc
Confidence 4556666666665555443 223 899999999888875 367899999975211000 0000 00
Q ss_pred EecCCCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECCCCcEEEE-eccCCCcEEEEEEecCCCCEEEEEECCCcEEEEe
Q 005147 613 EMASRSKLSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (712)
Q Consensus 613 ~~~~~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~~~~~~~~-~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd 689 (712)
...+......+.|+| ++++|+.++. ++.|.++| .+++.+.+ +... . ++.+.|.....+++.+.||++.+||
T Consensus 120 ~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 120 RFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTD 193 (373)
T ss_pred ccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEE
Confidence 000012345789999 5888888774 57899999 99998887 6432 1 2556664556778888899999999
Q ss_pred CCCCcEE
Q 005147 690 INQAILL 696 (712)
Q Consensus 690 ~~~~~~v 696 (712)
. +++.+
T Consensus 194 ~-~g~~~ 199 (373)
T 2mad_H 194 H-AGGAA 199 (373)
T ss_pred C-CCcEE
Confidence 9 77766
No 471
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.48 E-value=0.0049 Score=65.67 Aligned_cols=122 Identities=11% Similarity=-0.034 Sum_probs=80.9
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEec--------CCCCeEEEEEcCCCCCEEEEEe-------
Q 005147 573 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--------SRSKLSSICWNSYIKSQIASSN------- 637 (712)
Q Consensus 573 ~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~--------~~~~v~~v~~~p~~~~~lasgs------- 637 (712)
...|.+++..++..+.++.+.+.|+.+.... ......... .......+.++|. ++.++.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~---v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d-~~~lyV~~~~~~~~~ 292 (373)
T 2mad_H 217 QPAQANKSGRIVWPVYSGKILQADISAAGAT---NKAPIDALSGGRKADTWRPGGWQQVAYLKS-SDGIYLLTSEQSAWK 292 (373)
T ss_pred cceeEecCCEEEEEcCCceEEEEeccCCcce---EeeeeeecCCcccccceecCceEeEEECCC-CCEEEEEeccCCccc
Confidence 3456676655444457789999998642100 000010000 0122334778884 55555543
Q ss_pred ---CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCC-EEEEEE-CCCcEEEEeCCCCcEEEEEe
Q 005147 638 ---FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGS-DDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 638 ---~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~-~l~sgs-~D~~v~lWd~~~~~~v~~~~ 700 (712)
.++.|.++|+.+++.+.++.. ....+++.|+| |++ +++++. .++.|.+||+.+++.+.++.
T Consensus 293 ~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~-Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~ 358 (373)
T 2mad_H 293 LHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQ-DGGPDLYALSAGTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred ccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECC-CCCeEEEEEcCCCCeEEEEECCCCCEEeeec
Confidence 246799999999999998863 44689999998 888 777777 59999999999999998753
No 472
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.46 E-value=0.0012 Score=76.66 Aligned_cols=161 Identities=12% Similarity=0.047 Sum_probs=98.0
Q ss_pred ccCCCccceecccCCCCCCcEEEE-EcCC----cEEE-EEccCCceec-CCCCe--eEEEEcCCCCEEEEEeCCCc----
Q 005147 525 KEGYSEGRRSGWINPFLEGLCKYL-SFSK----LRVK-ADLNQGDLLN-SSNLV--CSLSFDRDGELFAAAGVNKK---- 591 (712)
Q Consensus 525 ~gh~~~~~~~~~~~~~~~~~~~~~-~~~~----~~v~-~dl~~~~~~~-h~~~V--~~i~f~~~~~~lat~~~d~~---- 591 (712)
++|+..+.+..| +.||...++ .... ..+. +|+.+++... +...+ .+++|+ |++.|+.++.+..
T Consensus 125 ~~~~~~l~~~~~---SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 125 PDGTTALDQLSF---SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TTSCCEEEEEEE---CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCCcEEEEEEEE---CCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 345545555566 445543332 2111 2233 8888777542 22223 578999 9999998887743
Q ss_pred ---------EEEEEcCCccccCcccccceEE-ec-CCCCeEEEEEcCCCCCEEEEE-e---CCCcEEEEECCCCc-EEEE
Q 005147 592 ---------IKVFECDAIINENRDIHYPVVE-MA-SRSKLSSICWNSYIKSQIASS-N---FEGVVQVWDVSRSQ-VLTE 655 (712)
Q Consensus 592 ---------I~iwD~~~~~~~~~~~~~~~~~-~~-~~~~v~~v~~~p~~~~~lasg-s---~Dg~V~lwD~~~~~-~~~~ 655 (712)
|++|++.+..... ..+.. .. +...+.++.|+| ++.+|+.. + .+..|.+||+.++. ....
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~----~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDD----RLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGC----EEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred ccccCCCcEEEEEECCCCcccc----eEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 9999987632211 11221 12 344578899999 57766443 3 23589999998774 4566
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEECC---CcEEEEeCCCCcE
Q 005147 656 MREHERRVWSIDFSSADPTLLASGSDD---GSVKLWSINQAIL 695 (712)
Q Consensus 656 ~~~H~~~v~sv~fsp~~~~~l~sgs~D---~~v~lWd~~~~~~ 695 (712)
+..+....... |+|..+.++++...| +.|.+||+.++..
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 77777776665 565344555555554 6799999987654
No 473
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.45 E-value=0.013 Score=59.12 Aligned_cols=118 Identities=9% Similarity=-0.002 Sum_probs=85.6
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
...+.++++++++.++++...++.|..||... .. ...........+.++++.+ +++++++...++.|..||.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~------~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTADG-TI------YEYDLPNKGSYPAFITLGS-DNALWFTENQNNSIGRITN 174 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTTS-CE------EEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCCC-CE------EEccCCCCCCCceeEEECC-CCCEEEEecCCCeEEEECC
Confidence 46789999999999888877788999998752 10 0011112345688999998 5777777777889999998
Q ss_pred CCCcEEE-EeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEE
Q 005147 648 SRSQVLT-EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILL 696 (712)
Q Consensus 648 ~~~~~~~-~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v 696 (712)
+++... ....+...+.+++++| ++.+.++....+.|.+||. ++...
T Consensus 175 -~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 175 -TGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEE
T ss_pred -CCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEE
Confidence 665443 2234456789999997 8888887777888999998 45543
No 474
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.43 E-value=0.00093 Score=72.29 Aligned_cols=116 Identities=9% Similarity=0.094 Sum_probs=84.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCC--cEEEEE
Q 005147 569 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVWD 646 (712)
Q Consensus 569 ~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg--~V~lwD 646 (712)
....+|+|+++++++++...++.|++||..+... ........... ++|+| +++.|+.++.++ .|.+||
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~--------~~~~~~~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV--------TTVHPGFKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEE--------EEEEETCCBCB-CEECT-TSSEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEE--------EEeeccCCCCc-eeEec-CCCcEEEEecCCCceEEEEE
Confidence 4678999999999888888889999999865211 11111122233 99999 588888888876 799999
Q ss_pred CCCCcEEEEe----ccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcE
Q 005147 647 VSRSQVLTEM----REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAIL 695 (712)
Q Consensus 647 ~~~~~~~~~~----~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~ 695 (712)
...+.....+ ..+...+++++++|.++.+++ +..++.|..||..++..
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEV 252 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCE
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCE
Confidence 8766544444 325677899999985566555 66688999999987753
No 475
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.35 E-value=0.0011 Score=70.72 Aligned_cols=116 Identities=12% Similarity=-0.014 Sum_probs=82.5
Q ss_pred EEEcCCCCEEEEEeC-----CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe----------C
Q 005147 574 LSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN----------F 638 (712)
Q Consensus 574 i~f~~~~~~lat~~~-----d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs----------~ 638 (712)
....|+++.+..+.. ++.|.++|..+. ..+.......... +.++| ++++++.++ .
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--------~v~~~I~vG~~P~-va~sp-DG~~lyVan~~~~r~~~G~~ 107 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--------RVIGMIDGGFLPN-PVVAD-DGSFIAHASTVFSRIARGER 107 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--------EEEEEEEECSSCE-EEECT-TSSCEEEEEEEEEETTEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC--------eEEEEEECCCCCc-EEECC-CCCEEEEEcccccccccCCC
Confidence 345688886666654 679999998762 1122222222224 99999 476665554 3
Q ss_pred CCcEEEEECCCCcEEEEeccCC-------CcEEEEEEecCCCCEEEEEEC--CCcEEEEeCCCCcEEEEEe
Q 005147 639 EGVVQVWDVSRSQVLTEMREHE-------RRVWSIDFSSADPTLLASGSD--DGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H~-------~~v~sv~fsp~~~~~l~sgs~--D~~v~lWd~~~~~~v~~~~ 700 (712)
++.|.+||..+++.+.++.-.. ..-+.+.|+| ||+++..+.. ++.|.++|+.+++.+.++-
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 6789999999999988875321 2456799998 8988777763 7899999999999888773
No 476
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.30 E-value=0.011 Score=61.31 Aligned_cols=148 Identities=12% Similarity=0.076 Sum_probs=90.2
Q ss_pred cceecccCCCCCCcEEEEEcCCcEEE-EEccCCcee--cCCCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCccc
Q 005147 531 GRRSGWINPFLEGLCKYLSFSKLRVK-ADLNQGDLL--NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI 607 (712)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~dl~~~~~~--~h~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~ 607 (712)
+.+..| ++ ..+.+.+.+.....+. |+..++... .....|.++.|+++++++++. +..|.+||..++..
T Consensus 51 ~egp~~-~~-~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~----- 121 (326)
T 2ghs_A 51 GEGPTF-DP-ASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVL----- 121 (326)
T ss_dssp EEEEEE-ET-TTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCE-----
T ss_pred CcCCeE-eC-CCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcE-----
Confidence 345566 22 1244444444444544 777665432 235679999999999877765 34599999865321
Q ss_pred ccceEEec---CCCCeEEEEEcCCCCCEEEEEeC------CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEE-E
Q 005147 608 HYPVVEMA---SRSKLSSICWNSYIKSQIASSNF------EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL-A 677 (712)
Q Consensus 608 ~~~~~~~~---~~~~v~~v~~~p~~~~~lasgs~------Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l-~ 677 (712)
..+.... ....+++++++| +++++++... .+.|..+| +++. ..+..+....+.++|+| +++.+ +
T Consensus 122 -~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~-dg~~lyv 195 (326)
T 2ghs_A 122 -TLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSP-DGTTGYF 195 (326)
T ss_dssp -EEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECT-TSCEEEE
T ss_pred -EEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcC-CCCEEEE
Confidence 0111111 123588999999 5777665542 24455555 5543 33434445678999998 78755 5
Q ss_pred EEECCCcEEEEeCC--CC
Q 005147 678 SGSDDGSVKLWSIN--QA 693 (712)
Q Consensus 678 sgs~D~~v~lWd~~--~~ 693 (712)
+.+.++.|.+||+. ++
T Consensus 196 ~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp EETTTCEEEEEEBCTTTC
T ss_pred EECCCCEEEEEEcccccC
Confidence 55567899999986 55
No 477
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.27 E-value=0.0018 Score=68.00 Aligned_cols=125 Identities=13% Similarity=0.073 Sum_probs=86.2
Q ss_pred CCeeEEEEcCCCCEEEEEe--CCCcEEEEEcCCccccCcccccce---EEecCCCCeEEEEEcCCCCCEEEEEeC-----
Q 005147 569 NLVCSLSFDRDGELFAAAG--VNKKIKVFECDAIINENRDIHYPV---VEMASRSKLSSICWNSYIKSQIASSNF----- 638 (712)
Q Consensus 569 ~~V~~i~f~~~~~~lat~~--~d~~I~iwD~~~~~~~~~~~~~~~---~~~~~~~~v~~v~~~p~~~~~lasgs~----- 638 (712)
.....|+++++|++|++.. .++.++||.+..+. ....+. ....+-..+.+|++++. ++++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~----~~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG----LIPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE----EEESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC----eecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCC
Confidence 5788999999999999864 23436666664211 000010 01134567899999994 666665544
Q ss_pred CCcEEEEECCCCcEEEEeccC------CCcEEEEEEecCCCCEEEEEE---CCCcEEEEeCCCCcEEEE
Q 005147 639 EGVVQVWDVSRSQVLTEMREH------ERRVWSIDFSSADPTLLASGS---DDGSVKLWSINQAILLLH 698 (712)
Q Consensus 639 Dg~V~lwD~~~~~~~~~~~~H------~~~v~sv~fsp~~~~~l~sgs---~D~~v~lWd~~~~~~v~~ 698 (712)
++.|.+||+.+++.+.++..+ ...+..++++|.++..+++.+ .++.|.+||+.+++....
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 688999999999887776532 245789999974566677776 789999999998876543
No 478
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.17 E-value=0.0048 Score=64.66 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=81.3
Q ss_pred cCCCCeeEEEEcCCCCEEEEEeC-----CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe---
Q 005147 566 NSSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--- 637 (712)
Q Consensus 566 ~h~~~V~~i~f~~~~~~lat~~~-----d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs--- 637 (712)
+|...+.+|.|+++++++++-.. +++|.+||+.++..... ...+.....+...+..++++|..+..+++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~-~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRV-IYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEE-EECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEE-EECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 45678999999999987776544 68999999875321000 0000000122345789999985455556655
Q ss_pred CCCcEEEEECCCCcEEEEeccCC-----------------------------CcEEEEEEecCCCCEEEEEECCCcEEEE
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHE-----------------------------RRVWSIDFSSADPTLLASGSDDGSVKLW 688 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~-----------------------------~~v~sv~fsp~~~~~l~sgs~D~~v~lW 688 (712)
.++.|.+||+.+++..+.+.+|. ..++.|+|+| +++.|..++.++. ++|
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~-~l~ 220 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHST-SMY 220 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCS-EEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCC-eEE
Confidence 68899999999888777665531 2368899998 8888888777663 444
Q ss_pred eC
Q 005147 689 SI 690 (712)
Q Consensus 689 d~ 690 (712)
.+
T Consensus 221 ~~ 222 (343)
T 2qe8_A 221 RI 222 (343)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 479
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.10 E-value=0.0038 Score=72.10 Aligned_cols=155 Identities=10% Similarity=0.032 Sum_probs=100.5
Q ss_pred cEEEEEcCCcEEEEEccCCc--ee---cCCCCeeEEEEcCCC---CEEEEEeCCCcEEEEEcCCccccCccccc--c-eE
Q 005147 544 LCKYLSFSKLRVKADLNQGD--LL---NSSNLVCSLSFDRDG---ELFAAAGVNKKIKVFECDAIINENRDIHY--P-VV 612 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~~--~~---~h~~~V~~i~f~~~~---~~lat~~~d~~I~iwD~~~~~~~~~~~~~--~-~~ 612 (712)
.+...+.++++++|..+... .. ....++ -+....+| ..++.++.++.|.++|..++......... + ..
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~-l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI-LADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE-EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcE-EEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence 46777888899998876421 11 112222 22333467 68999999999999999875321100000 0 00
Q ss_pred Ee-cCCC------------------------CeEEEEEcCCCCCEEEEEeC-----------------------------
Q 005147 613 EM-ASRS------------------------KLSSICWNSYIKSQIASSNF----------------------------- 638 (712)
Q Consensus 613 ~~-~~~~------------------------~v~~v~~~p~~~~~lasgs~----------------------------- 638 (712)
.. .... .-..++++|. ..+++.+..
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~-~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ-TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT-TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC-CCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 00 0000 0125788885 555555432
Q ss_pred --------------CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEece
Q 005147 639 --------------EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 639 --------------Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
.|.|..||+.+++.+.++. +..++++..+.+ ++.+++.|+.|+.+++||.++|+.+.++-..
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 2789999999999999887 445566667775 6788888999999999999999999877543
No 480
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.00 E-value=0.0023 Score=61.75 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=45.2
Q ss_pred CccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-cCceeccCCCCceeecCCCcEEE
Q 005147 65 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSF 123 (712)
Q Consensus 65 g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs-~gIvHrDLkP~NIll~~~~~vkl 123 (712)
..||.+.|+..+.++++.+++.++.|.+.+|.-+-. ..-..+=+.|..|++..+|.|.+
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f 91 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTL 91 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEE
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceec
Confidence 578999998888889999999999999999876621 11113334568888888888877
No 481
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.98 E-value=0.0081 Score=69.52 Aligned_cols=155 Identities=14% Similarity=0.124 Sum_probs=98.1
Q ss_pred cEEEEEcCCcEEEEEccCC--ceec--CCCCeeEEEEcCCCC---EEEEEeCCCcEEEEEcCCccccCcc------ccc-
Q 005147 544 LCKYLSFSKLRVKADLNQG--DLLN--SSNLVCSLSFDRDGE---LFAAAGVNKKIKVFECDAIINENRD------IHY- 609 (712)
Q Consensus 544 ~~~~~~~~~~~v~~dl~~~--~~~~--h~~~V~~i~f~~~~~---~lat~~~d~~I~iwD~~~~~~~~~~------~~~- 609 (712)
.+..++.++++++|..+.. +... ....+.-.....+|. .++.++.+|.++++|..++...... ...
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 4778888899999887642 1111 122222222223554 7889999999999999875321000 000
Q ss_pred -------ceEE------e-cCCC-----------CeEEEEEcCCCCCEEEEEe---------------------------
Q 005147 610 -------PVVE------M-ASRS-----------KLSSICWNSYIKSQIASSN--------------------------- 637 (712)
Q Consensus 610 -------~~~~------~-~~~~-----------~v~~v~~~p~~~~~lasgs--------------------------- 637 (712)
++.. . .... ....++++|. ..+++.+.
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~-~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPD-TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETT-TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCC-CCEEEEeccccceeeeeccccccccccccccccCc
Confidence 0000 0 0000 1123688885 44555442
Q ss_pred ------------------CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 638 ------------------FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 638 ------------------~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
++|.|..||+.+++.+.++..+. +++.-.+.. .+.+++.|+.|+.+++||.++|+.+-++
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceE-CCCEEEEECCCCcEEEEECCCCccceee
Confidence 14789999999999999987654 344446664 6789999999999999999999999766
Q ss_pred ec
Q 005147 700 VD 701 (712)
Q Consensus 700 ~~ 701 (712)
-.
T Consensus 513 ~~ 514 (689)
T 1yiq_A 513 PA 514 (689)
T ss_dssp EC
T ss_pred eC
Confidence 43
No 482
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.87 E-value=0.013 Score=63.40 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=91.4
Q ss_pred CcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEe----------CCCcEEEEEcCCccccCcccccceE
Q 005147 543 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVV 612 (712)
Q Consensus 543 ~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~----------~d~~I~iwD~~~~~~~~~~~~~~~~ 612 (712)
+.+.+.+..++++++.+..|. .+ .+.++||++.+.++. .++.|.++|..+..- ...+.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-----~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v-----v~~I~ 166 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-----LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP-----IADIE 166 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-----EEEEE
T ss_pred CeEEEEECCCCEEEEEEECCC-----CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE-----EEEEE
Confidence 677777888888887777653 34 799999999766664 467999999976211 11111
Q ss_pred Eec------CCCCeEEEEEcCCCCCEEEEEeC--CCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCc
Q 005147 613 EMA------SRSKLSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGS 684 (712)
Q Consensus 613 ~~~------~~~~v~~v~~~p~~~~~lasgs~--Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~ 684 (712)
.+ .......+.|+| ++++++.++. ++.|.+.|+.+++.+.++.-- .+ ....|.....+++.+.||+
T Consensus 167 -v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~--g~--~~~~p~g~~~~v~~~~dG~ 240 (426)
T 3c75_H 167 -LPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP--DC--YHIFPASPTVFYMNCRDGS 240 (426)
T ss_dssp -ETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--SE--EEEEEEETTEEEEEETTSS
T ss_pred -CCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC--Cc--eeeccCCCcEEEEEcCCCC
Confidence 11 012345789999 5888888774 578999999999998887642 12 3334433456666777777
Q ss_pred EEEEeCCCCcEE
Q 005147 685 VKLWSINQAILL 696 (712)
Q Consensus 685 v~lWd~~~~~~v 696 (712)
+.+.++.+++..
T Consensus 241 ~~~V~~~~~~v~ 252 (426)
T 3c75_H 241 LARVDFADGETK 252 (426)
T ss_dssp EEEEECCTTCCE
T ss_pred EEEEECCCCcEE
Confidence 777777555443
No 483
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.66 E-value=0.016 Score=58.46 Aligned_cols=122 Identities=8% Similarity=0.119 Sum_probs=80.3
Q ss_pred CCeeEEEEcCCCCEEEEEeC--CCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 569 NLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 569 ~~V~~i~f~~~~~~lat~~~--d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
.....+.|++++.++++.|. ++.|.++|+.++.- .. ....+.....-.+++.. +.++++.-.++.|.++|
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v-----~~-~i~l~~~~fgeGi~~~g--~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKV-----EN-IHKMDDSYFGEGLTLLN--EKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCE-----EE-EEECCTTCCEEEEEEET--TEEEEEETTCSEEEEEE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE-----EE-EEecCCCcceEEEEEeC--CEEEEEEecCCEEEEEE
Confidence 34679999998877777664 68999999987321 11 11112222223456653 45555556789999999
Q ss_pred CCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEec
Q 005147 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 647 ~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
..+.+.+.++..-...-+.+ ++ |+..++.+..+++|.++|..+.+.+.++.-
T Consensus 93 ~~t~~v~~~i~~g~~~g~gl--t~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 93 RRTLSNIKNFTHQMKDGWGL--AT-DGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp TTTTEEEEEEECCSSSCCEE--EE-CSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CCCCcEEEEEECCCCCeEEE--EE-CCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 99999999886321222444 44 555444445789999999999888877653
No 484
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.61 E-value=0.00023 Score=75.94 Aligned_cols=109 Identities=9% Similarity=-0.018 Sum_probs=59.5
Q ss_pred CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q 005147 579 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE 658 (712)
Q Consensus 579 ~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~ 658 (712)
++..+++++.|+.|..||..++.... . . .. ..+.+..+.. ++..+++++.||.|..||..+|+.+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W---~--~---~~-~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKW---T--L---KE-DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEE---E--E---EC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE---E--e---cC-CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeec
Confidence 57789999999999999997643211 1 1 11 2333333444 366788889999999999999988877765
Q ss_pred CCCc-EE-EEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEE
Q 005147 659 HERR-VW-SIDFSSADPTLLASGSDDGSVKLWSINQAILLLHL 699 (712)
Q Consensus 659 H~~~-v~-sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~ 699 (712)
+... +. +..+. ++..+++|+.|+.|..||..+|+.+-++
T Consensus 78 ~~~~~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 78 TIPELVQASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp CHHHHHTTCSCC-------CCCCEEEEEEEEECCC--------
T ss_pred cCccccccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEe
Confidence 4221 11 01111 3457788889999999999999876544
No 485
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=96.56 E-value=0.00065 Score=70.23 Aligned_cols=72 Identities=10% Similarity=0.136 Sum_probs=55.7
Q ss_pred ceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhh-----------------------------------
Q 005147 56 PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS----------------------------------- 100 (712)
Q Consensus 56 ~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs----------------------------------- 100 (712)
.|+++..+.|.+|.+... ..++..+...++.|++..|..||+
T Consensus 91 ~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 91 SFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp SCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred ceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 456655568988875331 236778888899999999988886
Q ss_pred -----------------------cCceeccCCCCceeecC--CCcEEEEeccccc
Q 005147 101 -----------------------QGIVVHNVRPSCFVMSS--FNHVSFIESASCS 130 (712)
Q Consensus 101 -----------------------~gIvHrDLkP~NIll~~--~~~vkl~dfg~~~ 130 (712)
..++|+|++|.||+++. .+.+.++||+.+.
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~ 222 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA 222 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCE
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCc
Confidence 24799999999999987 4567899999874
No 486
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.55 E-value=0.027 Score=57.59 Aligned_cols=116 Identities=9% Similarity=0.002 Sum_probs=80.4
Q ss_pred CCCeeEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEE
Q 005147 568 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (712)
Q Consensus 568 ~~~V~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD 646 (712)
.....+..|+|+++ ++++...++.|..|+... . ..........+..+.|++ +++++++...++.|.+||
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~--------~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-T--------VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-C--------EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEEC
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-C--------EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEEC
Confidence 45667899999998 677777889999998732 1 112223456688999999 588777766778899999
Q ss_pred CCCCcEEEEeccC-----CCcEEEEEEecCCCCEEEE----EEC-------------CCcEEEEeCCCCcEE
Q 005147 647 VSRSQVLTEMREH-----ERRVWSIDFSSADPTLLAS----GSD-------------DGSVKLWSINQAILL 696 (712)
Q Consensus 647 ~~~~~~~~~~~~H-----~~~v~sv~fsp~~~~~l~s----gs~-------------D~~v~lWd~~~~~~v 696 (712)
.. ++. ..+..+ ...++++.++| +|.+.+| |.. .+.|..||..+++..
T Consensus 114 ~~-g~~-~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~ 182 (305)
T 3dr2_A 114 AD-GQA-HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ 182 (305)
T ss_dssp TT-SCE-EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE
T ss_pred CC-CCE-EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE
Confidence 86 553 233211 23567899997 8998887 332 256778887666543
No 487
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=96.46 E-value=0.001 Score=69.33 Aligned_cols=72 Identities=10% Similarity=-0.008 Sum_probs=54.5
Q ss_pred CceEEEEeeCCccHHHhhcCCCCCCChhHHHHHHHHHHHHHHHhhhc---------------------------------
Q 005147 55 DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--------------------------------- 101 (712)
Q Consensus 55 ~~~~l~~e~~g~sL~~~l~~~~~~l~~~~~~~i~~qil~~l~~lHs~--------------------------------- 101 (712)
..+++++++.|.+|.+... ..++..+...++.++...|..||+.
T Consensus 101 ~~~lvme~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (320)
T 3r70_A 101 DRFNIMKYIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEK 177 (320)
T ss_dssp SSCEEEECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhh
Confidence 4566666668888864331 2267777888888888888888853
Q ss_pred ------------------------------CceeccCCCCceeecCCCcEEEEecccc
Q 005147 102 ------------------------------GIVVHNVRPSCFVMSSFNHVSFIESASC 129 (712)
Q Consensus 102 ------------------------------gIvHrDLkP~NIll~~~~~vkl~dfg~~ 129 (712)
.++|+|++|.||+++..+.+.++||+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~ 235 (320)
T 3r70_A 178 EQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDF 235 (320)
T ss_dssp TTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTC
T ss_pred cccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccc
Confidence 2399999999999998666799999987
No 488
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.42 E-value=0.19 Score=49.56 Aligned_cols=159 Identities=12% Similarity=0.054 Sum_probs=101.8
Q ss_pred cCCCccc--eecccCCCCCCcEEEEEcCCc--EEE-EEccCCceecC---CCCe--eEEEEcCCCCEEEEEeCCCcEEEE
Q 005147 526 EGYSEGR--RSGWINPFLEGLCKYLSFSKL--RVK-ADLNQGDLLNS---SNLV--CSLSFDRDGELFAAAGVNKKIKVF 595 (712)
Q Consensus 526 gh~~~~~--~~~~~~~~~~~~~~~~~~~~~--~v~-~dl~~~~~~~h---~~~V--~~i~f~~~~~~lat~~~d~~I~iw 595 (712)
.|....+ ++.| .++.+-..+...+ .+. .|+.+++.... .... ..+++. .+.+++..-.++.+.+|
T Consensus 16 phd~~~ftqGL~~----~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 16 PHDTTAFTEGLFY----LRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp ECCTTCCEEEEEE----ETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEE
T ss_pred CCCCccccccEEE----ECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEE
Confidence 4554444 5555 2356666655532 444 78888876642 2233 344444 23455555678999999
Q ss_pred EcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC--C---CcEEEEEEec
Q 005147 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH--E---RRVWSIDFSS 670 (712)
Q Consensus 596 D~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H--~---~~v~sv~fsp 670 (712)
|..+.. .+........=..+++. +..|+.++.++.|.++|..+.+.+.++.-. . ..++.+.|.
T Consensus 91 D~~tl~--------~~~ti~~~~~Gwglt~d---g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~- 158 (243)
T 3mbr_X 91 DLATLT--------PRARFRYPGEGWALTSD---DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV- 158 (243)
T ss_dssp ETTTTE--------EEEEEECSSCCCEEEEC---SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred ECCcCc--------EEEEEeCCCCceEEeeC---CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-
Confidence 997631 12222222233455543 556666677999999999999888877532 2 356778876
Q ss_pred CCCCEEEEEECCCcEEEEeCCCCcEEEEEece
Q 005147 671 ADPTLLASGSDDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 671 ~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
++.+.|..-.+..|.+-|.++|+.+..+-..
T Consensus 159 -~G~lyanvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 159 -NGELLANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp -TTEEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred -CCEEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence 6777766656889999999999998877644
No 489
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.42 E-value=0.023 Score=56.73 Aligned_cols=118 Identities=8% Similarity=0.192 Sum_probs=78.8
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCC--cEEEEEcCCccccCcccccceEEecCCCCeEE--EEEcCCCCCEEEEEeCCCcEE
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKLSS--ICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~--~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~--v~~~p~~~~~lasgs~Dg~V~ 643 (712)
......+.|+ ++.++.++|.++ .|+++|+.++.- .....-...... ++.. ...++...-.++.+.
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv--------~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT--------LQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGF 110 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE--------EEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEE
T ss_pred CcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE--------EEEEecCCccceeEEEEe--CCEEEEEEeeCCEEE
Confidence 4445789999 778888888876 899999987421 111111223333 4443 234444455688999
Q ss_pred EEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+||..+.+.+.++..- ..-|.+++ ++..|+.+..+++|.++|..+.+.+.++-
T Consensus 111 v~D~~t~~~~~ti~~~-~eG~glt~---dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYD-GEGWGLTH---NDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp EEETTTCCEEEEEECS-SCCCCEEE---CSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred EEECccCcEEEEEECC-CCceEEec---CCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 9999999999998753 33355554 44544444457889999999988887754
No 490
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.39 E-value=0.025 Score=63.07 Aligned_cols=138 Identities=15% Similarity=0.100 Sum_probs=89.8
Q ss_pred CCCcEEEEEcCCcEEEEEccCCceecCCCCeeEEEEcCCCCEEEEEeCCC---------------c--------------
Q 005147 541 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK---------------K-------------- 591 (712)
Q Consensus 541 ~~~~~~~~~~~~~~v~~dl~~~~~~~h~~~V~~i~f~~~~~~lat~~~d~---------------~-------------- 591 (712)
.++.+.+.+.++.++.|.+.-+. .-..+.++|+|.++++++.+. .
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSG------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESS------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred cCceEEEEECCCCeEEEEEEeCC------CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 56678888888999999887532 123466889998877777543 2
Q ss_pred ---------EEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCE-EEEEeCCCcEEEEECCCCc----------
Q 005147 592 ---------IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ-IASSNFEGVVQVWDVSRSQ---------- 651 (712)
Q Consensus 592 ---------I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~-lasgs~Dg~V~lwD~~~~~---------- 651 (712)
|.|.|.++.. ....+....-.....++.++|+ +.+ ++++..+.+|.++|+.+.+
T Consensus 247 ~Gk~~~i~~V~VID~~~~~-----~~~~~~~Ipvg~~PhGv~~sPD-Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~ 320 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEA-----SSLFTRYIPIANNPHGCNMAPD-KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR 320 (595)
T ss_dssp HTCSEEETTEEEEECSGGG-----CCSSEEEEEEESSCCCEEECTT-SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred CCCeeEECcEEEEeCcccC-----CceeEEEEecCCCceEEEEcCC-CCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence 4444443210 0000112222234568999995 665 5555578999999999653
Q ss_pred --EEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCC
Q 005147 652 --VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (712)
Q Consensus 652 --~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~ 692 (712)
.+.+.. -....+.++|+| +|...++.-.|+.|.+||+..
T Consensus 321 ~~v~~~v~-vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 321 SAVVAEPE-LGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp GGEEECCB-CCSCEEEEEECT-TSEEEEEETTTTEEEEEEHHH
T ss_pred cceEEEcC-CCCCcceEEECC-CCeEEEEEecCCcEEEEEhhH
Confidence 344443 345678899998 885555556799999999976
No 491
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.38 E-value=0.027 Score=60.78 Aligned_cols=154 Identities=12% Similarity=0.138 Sum_probs=96.0
Q ss_pred CcEEEEEcCC-----cEEEEEcc---CCceecCCCC-ee----EEEEc--CCCCE-EEEEeCCCcEEEEEcCCccccCcc
Q 005147 543 GLCKYLSFSK-----LRVKADLN---QGDLLNSSNL-VC----SLSFD--RDGEL-FAAAGVNKKIKVFECDAIINENRD 606 (712)
Q Consensus 543 ~~~~~~~~~~-----~~v~~dl~---~~~~~~h~~~-V~----~i~f~--~~~~~-lat~~~d~~I~iwD~~~~~~~~~~ 606 (712)
..+.+.+.+. ++|+..+. .++-.+|.++ .| +..++ ++.++ +++|..+.+|.|+|+.+.... ..
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~-p~ 121 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPRE-PK 121 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTS-CE
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCC-ce
Confidence 3445555554 56664443 3445566554 11 12345 66775 555667899999999652111 11
Q ss_pred cccceEE---e--c-CCCCeEEEEEcCCCCCEEEEEeCC------CcEEEEECCCCcEEEEeccCCC---cEEEEEEecC
Q 005147 607 IHYPVVE---M--A-SRSKLSSICWNSYIKSQIASSNFE------GVVQVWDVSRSQVLTEMREHER---RVWSIDFSSA 671 (712)
Q Consensus 607 ~~~~~~~---~--~-~~~~v~~v~~~p~~~~~lasgs~D------g~V~lwD~~~~~~~~~~~~H~~---~v~sv~fsp~ 671 (712)
.+. +.+ . . -.+....+...| ++ +++++..+ |.|.+.|..+.+.+.++..-.. -.+.+-|+|
T Consensus 122 ~~k-~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p- 197 (462)
T 2ece_A 122 IIK-VIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNL- 197 (462)
T ss_dssp EEE-EECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEET-
T ss_pred eee-eechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECC-
Confidence 111 110 0 0 112344567788 46 77777666 7899999999999999873322 245688898
Q ss_pred CCCEEEEEE-------------------CCCcEEEEeCCCCcEEEEEec
Q 005147 672 DPTLLASGS-------------------DDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 672 ~~~~l~sgs-------------------~D~~v~lWd~~~~~~v~~~~~ 701 (712)
+++.++|.. .+.+|.+||+.+++.+.++-.
T Consensus 198 ~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 198 PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 888888874 378999999999877766543
No 492
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.38 E-value=0.048 Score=54.54 Aligned_cols=119 Identities=11% Similarity=0.147 Sum_probs=82.9
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~ 647 (712)
......+.|+ ++.++.+.|.++.|+++|+.++.- ...+ .....---.+++.. +.++...-.++.+.+||.
T Consensus 54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv-----~~~~--l~~~~FgeGit~~g--~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP-----VWME--RLGNIFAEGLASDG--ERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC-----SEEE--ECTTCCEEEEEECS--SCEEEEESSSCEEEEEET
T ss_pred ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE-----EeEE--CCCCcceeEEEEeC--CEEEEEEccCCEEEEEEC
Confidence 4556789998 467888999999999999987421 1111 22211112355543 456666667899999999
Q ss_pred CCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 648 ~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
.+.+.+.++.. ...-|.+++ ++..|+.+..+++|.++|..+.+.+.++-
T Consensus 124 ~Tl~~~~ti~~-~~eGwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 124 MPPQRERTTRY-SGEGWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp TTTEEEEEEEC-SSCCCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred CcCcEEEEEeC-CCceeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 99999999875 334466665 45555555568999999999988887764
No 493
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.36 E-value=0.17 Score=50.90 Aligned_cols=152 Identities=9% Similarity=0.046 Sum_probs=96.0
Q ss_pred eecccCCCCCCcEEEEEcC--CcEEE-EEccCCceecC-----CCCeeEEEEcCCCCEEEEEeCCCcEEEEEcCCccccC
Q 005147 533 RSGWINPFLEGLCKYLSFS--KLRVK-ADLNQGDLLNS-----SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN 604 (712)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~--~~~v~-~dl~~~~~~~h-----~~~V~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~ 604 (712)
++.| + .++.+.+++.. ...+. .|+.+++.... ......++++. +.+.++.-.++.|.++|..+..
T Consensus 25 Gl~~-~--~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~--- 97 (266)
T 2iwa_A 25 GLVY-A--ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLS--- 97 (266)
T ss_dssp EEEE-C--STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTE---
T ss_pred cEEE-e--CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCc---
Confidence 5666 2 33565555532 33444 78877775532 22233555552 3455555578999999997621
Q ss_pred cccccceEEecCC-CCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC-----CCcEEEEEEecCCCCEEEE
Q 005147 605 RDIHYPVVEMASR-SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-----ERRVWSIDFSSADPTLLAS 678 (712)
Q Consensus 605 ~~~~~~~~~~~~~-~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H-----~~~v~sv~fsp~~~~~l~s 678 (712)
.+...... ..-..++ + ++..++.+..++.|.++|..+.+.+.++.-- -..++.+.|. ++.+.+.
T Consensus 98 -----v~~~i~~g~~~g~glt--~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn 167 (266)
T 2iwa_A 98 -----NIKNFTHQMKDGWGLA--T-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWAN 167 (266)
T ss_dssp -----EEEEEECCSSSCCEEE--E-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEE
T ss_pred -----EEEEEECCCCCeEEEE--E-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEe
Confidence 11112111 1223344 4 3555556667899999999999888777521 1247888988 6777776
Q ss_pred EECCCcEEEEeCCCCcEEEEEec
Q 005147 679 GSDDGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 679 gs~D~~v~lWd~~~~~~v~~~~~ 701 (712)
...++.|.+-|..+++.+..+-.
T Consensus 168 ~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 168 IWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp ETTSSEEEEEETTTCCEEEEEEC
T ss_pred cCCCCeEEEEECCCCcEEEEEEC
Confidence 66789999999999999887754
No 494
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.35 E-value=0.016 Score=62.57 Aligned_cols=101 Identities=11% Similarity=-0.058 Sum_probs=72.3
Q ss_pred CcEEEEEcCCccccCcccccceEEecCCCCeEEEEEcCCCCCEEEEEe----------CCCcEEEEECCCCcEEEEeccC
Q 005147 590 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN----------FEGVVQVWDVSRSQVLTEMREH 659 (712)
Q Consensus 590 ~~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~lasgs----------~Dg~V~lwD~~~~~~~~~~~~H 659 (712)
+.|.++|..+.. .+........- .+.++|+ ++.++.++ .++.|.++|..+++.+.++.--
T Consensus 99 ~~VsVID~~t~~--------vv~~I~vG~~P-gia~SpD-gk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 99 TQQFVIDGSTGR--------ILGMTDGGFLP-HPVAAED-GSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp EEEEEEETTTTE--------EEEEEEECSSC-EEEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred CeEEEEECCCCE--------EEEEEECCCCC-ceEECCC-CCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECC
Confidence 689999987621 11222222223 8999995 66666554 4678999999999998887532
Q ss_pred -------CCcEEEEEEecCCCCEEEEEEC--CCcEEEEeCCCCcEEEEEec
Q 005147 660 -------ERRVWSIDFSSADPTLLASGSD--DGSVKLWSINQAILLLHLVD 701 (712)
Q Consensus 660 -------~~~v~sv~fsp~~~~~l~sgs~--D~~v~lWd~~~~~~v~~~~~ 701 (712)
......+.|+| |++++..+.. ++.|.+.|+.+++.+.++--
T Consensus 169 g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 169 DAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp TCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 12345789998 8988888764 68999999999998877643
No 495
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.34 E-value=0.19 Score=52.73 Aligned_cols=147 Identities=8% Similarity=0.005 Sum_probs=91.4
Q ss_pred CCCCCcEEEEEcCCcEEEEEccCCceecCC--CCeeEEEEcC--CCCEEEEEeCCCcEEEEEcCCccccCcccccceEEe
Q 005147 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSS--NLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (712)
Q Consensus 539 ~~~~~~~~~~~~~~~~v~~dl~~~~~~~h~--~~V~~i~f~~--~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~ 614 (712)
+..++.+...+..+++++|........+.. ..+.++.-.| .+..+..++.++.|..+|..++.... ..
T Consensus 194 g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w--------~~ 265 (376)
T 3q7m_A 194 GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMW--------KR 265 (376)
T ss_dssp CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEE--------EE
T ss_pred EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEe--------ec
Confidence 455677777777788888876543211100 0000011111 24677777889999999997642110 11
Q ss_pred cCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC-CCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCC
Q 005147 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQA 693 (712)
Q Consensus 615 ~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H-~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~ 693 (712)
. .....++... +..++.++.+|.|..+|..+++.+...... ...+.+.... +..++.++.+|.|.++|..+|
T Consensus 266 ~-~~~~~~~~~~---~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~---~~~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 266 E-LGSVNDFIVD---GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY---NGNLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp C-CCCEEEEEEE---TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE---TTEEEEECTTSEEEEEETTTC
T ss_pred c-CCCCCCceEE---CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE---CCEEEEEeCCCeEEEEECCCC
Confidence 1 1223444443 567888888999999999999998877632 2233333333 467888889999999999999
Q ss_pred cEEEEEe
Q 005147 694 ILLLHLV 700 (712)
Q Consensus 694 ~~v~~~~ 700 (712)
+.+-..-
T Consensus 339 ~~~~~~~ 345 (376)
T 3q7m_A 339 RFVAQQK 345 (376)
T ss_dssp CEEEEEE
T ss_pred cEEEEEe
Confidence 9876554
No 496
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.31 E-value=0.039 Score=63.66 Aligned_cols=110 Identities=13% Similarity=0.018 Sum_probs=70.2
Q ss_pred CCcEEEEEcCCcEEEEEccCCcee---------------------------cCCCCeeEEEEcCCCCEEEEEeCCC----
Q 005147 542 EGLCKYLSFSKLRVKADLNQGDLL---------------------------NSSNLVCSLSFDRDGELFAAAGVNK---- 590 (712)
Q Consensus 542 ~~~~~~~~~~~~~v~~dl~~~~~~---------------------------~h~~~V~~i~f~~~~~~lat~~~d~---- 590 (712)
++.+..++..+++++|......-. +.......++++|++.++..+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 577788888888888877642211 1122234688999988888877654
Q ss_pred ---------------cEEEEEcCCccccCcccccceEEecC-------CCCeEEEEEcCCCC---CEEEEEeCCCcEEEE
Q 005147 591 ---------------KIKVFECDAIINENRDIHYPVVEMAS-------RSKLSSICWNSYIK---SQIASSNFEGVVQVW 645 (712)
Q Consensus 591 ---------------~I~iwD~~~~~~~~~~~~~~~~~~~~-------~~~v~~v~~~p~~~---~~lasgs~Dg~V~lw 645 (712)
.|..+|..++... ++ .....| ......+.... ++ ..++.++.+|.|.++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~---W~--~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~l 342 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYK---WH--YQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVL 342 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEE---EE--EESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEE
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEE---EE--EecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEE
Confidence 4888898774311 11 111111 11222233333 35 689999999999999
Q ss_pred ECCCCcEEEEec
Q 005147 646 DVSRSQVLTEMR 657 (712)
Q Consensus 646 D~~~~~~~~~~~ 657 (712)
|..+|+.+..+.
T Consensus 343 D~~tG~~l~~~~ 354 (677)
T 1kb0_A 343 DRTNGKFISAKN 354 (677)
T ss_dssp ETTTCCEEEEEE
T ss_pred ECCCCCEecccc
Confidence 999999987765
No 497
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.24 E-value=0.14 Score=51.17 Aligned_cols=147 Identities=6% Similarity=-0.010 Sum_probs=99.5
Q ss_pred CCcEEEEEcCCcEEE-EEccCCceecC--CCCe--eEEEEcCCCCEEEEEeCCCcEEEEEcCCccccCcccccceEEecC
Q 005147 542 EGLCKYLSFSKLRVK-ADLNQGDLLNS--SNLV--CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (712)
Q Consensus 542 ~~~~~~~~~~~~~v~-~dl~~~~~~~h--~~~V--~~i~f~~~~~~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~~~~~ 616 (712)
++.+....+..+++. .|+++++.... .... ..+++.. +.++++.-.++.+.+||..+.. .+.....
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~--------~~~ti~~ 134 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQ--------RERTTRY 134 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTE--------EEEEEEC
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCc--------EEEEEeC
Confidence 467777777777765 78888775542 1222 3455543 3455556678999999997632 1222222
Q ss_pred CCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEecc--CC---CcEEEEEEecCCCCEEEEEECCCcEEEEeCC
Q 005147 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE--HE---RRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (712)
Q Consensus 617 ~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~--H~---~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~ 691 (712)
...-..+++. +..|+.++.++.|.++|..+.+.+.++.- +. ..++.+.|. +|.+.|..-.+..|.+-|.+
T Consensus 135 ~~eGwGLt~D---g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 135 SGEGWGLCYW---NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp SSCCCCEEEE---TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEEEEECTT
T ss_pred CCceeEEecC---CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeEEEEeCC
Confidence 2222455543 56777777899999999999998887753 22 245788887 78777666678899999999
Q ss_pred CCcEEEEEece
Q 005147 692 QAILLLHLVDV 702 (712)
Q Consensus 692 ~~~~v~~~~~~ 702 (712)
+|+.+..+-..
T Consensus 210 TG~V~~~Idl~ 220 (268)
T 3nok_A 210 TGTVVGVIDAS 220 (268)
T ss_dssp TCBEEEEEECH
T ss_pred CCcEEEEEECC
Confidence 99998877643
No 498
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.21 E-value=0.12 Score=51.47 Aligned_cols=145 Identities=9% Similarity=-0.005 Sum_probs=93.9
Q ss_pred CCcEEEEEcCCc--EEE-EEccCCceecC---CCCe--eEEEEcCCCC-EEEEEeCCCcEEEEEcCCccccCcccccceE
Q 005147 542 EGLCKYLSFSKL--RVK-ADLNQGDLLNS---SNLV--CSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (712)
Q Consensus 542 ~~~~~~~~~~~~--~v~-~dl~~~~~~~h---~~~V--~~i~f~~~~~-~lat~~~d~~I~iwD~~~~~~~~~~~~~~~~ 612 (712)
++.+..+....+ .+. .|+++++.... .... ..+++. ++ +.++.-.++.+.+||..+.. .+.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~--------~~~ 121 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR--------QVR 121 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC--------EEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc--------EEE
Confidence 566666665544 444 78888876542 2233 334543 44 44444568999999997631 122
Q ss_pred EecCCCCeEEEEEcCCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC--C---CcEEEEEEecCCCCEEEEEECCCcEEE
Q 005147 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH--E---RRVWSIDFSSADPTLLASGSDDGSVKL 687 (712)
Q Consensus 613 ~~~~~~~v~~v~~~p~~~~~lasgs~Dg~V~lwD~~~~~~~~~~~~H--~---~~v~sv~fsp~~~~~l~sgs~D~~v~l 687 (712)
.......=..+++ ++..|+.++.++.|.++|..+.+.+.++.-. . ..++.+.|. +|.+.|..-.+..|.+
T Consensus 122 ti~~~~eG~glt~---dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 122 SFNYDGEGWGLTH---NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEECSSCCCCEEE---CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEE
T ss_pred EEECCCCceEEec---CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCeEEE
Confidence 2222222234443 3566666667889999999999988876532 2 345678886 6777776667889999
Q ss_pred EeCCCCcEEEEEec
Q 005147 688 WSINQAILLLHLVD 701 (712)
Q Consensus 688 Wd~~~~~~v~~~~~ 701 (712)
.|.++|+.+..+-.
T Consensus 197 IDp~tG~V~~~Id~ 210 (262)
T 3nol_A 197 IDPETGKVTGIIDL 210 (262)
T ss_dssp ECTTTCBEEEEEEC
T ss_pred EECCCCcEEEEEEC
Confidence 99999999887754
No 499
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.16 E-value=0.091 Score=51.91 Aligned_cols=118 Identities=12% Similarity=0.106 Sum_probs=79.5
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCC--cEEEEEcCCccccCcccccceEEecCCCCeE--EEEEcCCCCCEEEEEeCCCcEE
Q 005147 568 SNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKLS--SICWNSYIKSQIASSNFEGVVQ 643 (712)
Q Consensus 568 ~~~V~~i~f~~~~~~lat~~~d~--~I~iwD~~~~~~~~~~~~~~~~~~~~~~~v~--~v~~~p~~~~~lasgs~Dg~V~ 643 (712)
......+.|+. +.++.+.|.++ .|+.+|+.++.- .....-..... .++.. .+.++...-.++.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv--------~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI--------LQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGF 88 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE--------EEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCE--------EEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEE
Confidence 46677999986 67778878754 899999987321 11111112222 34443 245555566789999
Q ss_pred EEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEe
Q 005147 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLV 700 (712)
Q Consensus 644 lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~ 700 (712)
+||..+.+.+.++..- ..-|.++.. .+.+++| ..+++|.++|..+.+.+.++-
T Consensus 89 v~D~~tl~~~~ti~~~-~~Gwglt~d--g~~L~vS-dgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 89 VYDLATLTPRARFRYP-GEGWALTSD--DSHLYMS-DGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEETTTTEEEEEEECS-SCCCEEEEC--SSCEEEE-CSSSEEEEECTTTCCEEEEEE
T ss_pred EEECCcCcEEEEEeCC-CCceEEeeC--CCEEEEE-CCCCeEEEEeCCCCeEEEEEE
Confidence 9999999999998753 334666643 3445555 458899999999988877664
No 500
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.04 E-value=0.076 Score=59.83 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=47.7
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCcEEEEEEecCCCCEEEEEECCCcEEEEeCCCCcEEEEEece
Q 005147 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQAILLLHLVDV 702 (712)
Q Consensus 638 ~Dg~V~lwD~~~~~~~~~~~~H~~~v~sv~fsp~~~~~l~sgs~D~~v~lWd~~~~~~v~~~~~~ 702 (712)
.+|.|..||+.+++.+.++... .++++..+.. .+.+++.++.|+.|.+||.++|+.+-++-.+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCCCEEEEecCC-CCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 3578999999999998888643 3344444442 4567777999999999999999999776543
Done!