Your job contains 1 sequence.
>005153
MSGENQGGAIVPYSEEAKKPVVYPLRHGLKPPISRLGISWSRGNSLRVTVFRQPSEDSEN
EVGGKAVEVRLDGRDGEISDAQWRRIAYGSVSPFALLQSRKNSFASLSKISSTTSPFDAE
WWEYVLEYSKDISSLLGNQTSTTQSLIEDPKEVLKKDPEPSNLKAAWELMESFYADKLSQ
AWLPERLVDWLADYDSLFSSTQETVHSKLVDFQKDLVSLQVIEDEPKYWEVMSSALAVGW
LDIVVKLLRLHGSYQLDQLGNRETENGLVEAVAVLISKMPRMRPELEAGKLGECFKAKPD
FMKAWEKWRAQIAKLECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCTLTCHWMELYIA
HFLYIRPFTVGLESMYGLAQKCIQLKPMAASHRLMGLLIGILGENIEVVLAECSKGFGPW
MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIYLTS
CIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKKGSG
VYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLHNYR
DFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEERPLLNV
LQTNLLLNKLQELSIARLRPDFIEADLPPHALSSVRLALATNLGRTTLEEQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005153
(711 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123757 - symbol:AT4G32910 species:3702 "Arabi... 2574 1.3e-267 1
UNIPROTKB|J3QL54 - symbol:NUP85 "Nuclear pore complex pro... 273 2.1e-20 2
UNIPROTKB|B4DMQ3 - symbol:NUP85 "cDNA FLJ53138, highly si... 273 4.0e-20 2
UNIPROTKB|Q9BW27 - symbol:NUP85 "Nuclear pore complex pro... 273 5.7e-20 2
RGD|1311942 - symbol:Nup85 "nucleoporin 85" species:10116... 267 1.0e-19 2
MGI|MGI:3046173 - symbol:Nup85 "nucleoporin 85" species:1... 270 2.6e-19 2
UNIPROTKB|F1RVX6 - symbol:NUP85 "Uncharacterized protein"... 256 1.8e-18 1
UNIPROTKB|F1PFE9 - symbol:NUP85 "Uncharacterized protein"... 258 4.4e-18 2
UNIPROTKB|F1NRW5 - symbol:NUP85 "Uncharacterized protein"... 243 2.1e-17 2
UNIPROTKB|Q3ZC98 - symbol:NUP85 "Nuclear pore complex pro... 245 2.8e-17 1
ZFIN|ZDB-GENE-040801-145 - symbol:nup85 "nucleoporin 85" ... 242 5.9e-17 1
UNIPROTKB|Q6DK84 - symbol:nup85 "Nuclear pore complex pro... 239 1.0e-16 2
UNIPROTKB|Q68FJ0 - symbol:nup85 "Nuclear pore complex pro... 228 5.1e-16 2
UNIPROTKB|F5H0W7 - symbol:NUP85 "Nuclear pore complex pro... 196 1.6e-14 1
WB|WBGene00003788 - symbol:npp-2 species:6239 "Caenorhabd... 154 2.0e-10 2
FB|FBgn0034310 - symbol:Nup75 "Nucleoporin 75kD" species:... 168 6.0e-10 2
DICTYBASE|DDB_G0285415 - symbol:nup85 "nucleoporin 85" sp... 160 7.6e-09 2
>TAIR|locus:2123757 [details] [associations]
symbol:AT4G32910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0010074 "maintenance of meristem identity"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0050826 "response
to freezing" evidence=RCA] GO:GO:0005635 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0051028 EMBL:AL031804 EMBL:AL161582 EMBL:AF361625
EMBL:AY081256 EMBL:BT002244 IPI:IPI00524221 RefSeq:NP_567908.1
UniGene:At.28705 ProteinModelPortal:Q8RXH2 STRING:Q8RXH2
PaxDb:Q8RXH2 PRIDE:Q8RXH2 EnsemblPlants:AT4G32910.1 GeneID:829427
KEGG:ath:AT4G32910 TAIR:At4g32910 eggNOG:NOG275863
HOGENOM:HOG000005812 InParanoid:Q8RXH2 KO:K14304 OMA:HRLVYAQ
PhylomeDB:Q8RXH2 ProtClustDB:CLSN2689724 Genevestigator:Q8RXH2
InterPro:IPR011502 Pfam:PF07575 Uniprot:Q8RXH2
Length = 716
Score = 2574 (911.2 bits), Expect = 1.3e-267, P = 1.3e-267
Identities = 480/712 (67%), Positives = 577/712 (81%)
Query: 1 MSGENQGGAIVPYSEEAKKPVVYPLRHGLKPPISRLGISWSRGNSLRVTVFRQPS--EDS 58
MS E+ GG +V +S + K PV+YPL +GLK P+ RL ISW GN+LRVTV R P +D
Sbjct: 4 MSSESGGGELVLFSTKEKTPVLYPLSYGLKSPVHRLSISWGCGNNLRVTVLRNPELRDDD 63
Query: 59 ENEVGGKAVEVRLDGRDGEISDAQWRRIAYGSVSPFALLQSRKNSFASLSKISSTTSPFD 118
+ EVGGK V VRL G DGEISD QWRRIAYGSVSPFALLQSR+NS +SLSK+ ++S +
Sbjct: 64 DGEVGGKVVNVRLSGEDGEISDPQWRRIAYGSVSPFALLQSRRNSISSLSKMDMSSSLYQ 123
Query: 119 AEWWEYVLEYSKDISSLLGNQTSTTQSLIEDPKEVLKKDPEPSNLKAAWELMESFYADKL 178
WWEYV+EYS+DI SLL N S LIEDP+ V+K EP++LKAAWELME FYADK
Sbjct: 124 TAWWEYVMEYSRDIKSLLSNTISLPAPLIEDPRSVIKNAEEPTSLKAAWELMELFYADKT 183
Query: 179 SQAWLPERLVDWLADYDSLFSSTQETVHSKLVDFQKDLVSLQVIEDEPKYWEVMSSALAV 238
+WLPERLVDWL++YD L SS+ T++SKL DFQK+LV LQ IED+P+YWEVM+SAL+V
Sbjct: 184 CLSWLPERLVDWLSEYDILLSSSHPTIYSKLQDFQKELVGLQAIEDDPRYWEVMASALSV 243
Query: 239 GWLDIVVKLLRLHGSYQLDQLGNRETENGLVEAVAVLISKMPRMRPELEAGKLGECFKAK 298
GWL+IVVKLL LHGSYQLDQLG+RETENGLVEAVAVLISKMPRMRP+LE GK GEC AK
Sbjct: 244 GWLEIVVKLLHLHGSYQLDQLGHRETENGLVEAVAVLISKMPRMRPQLEDGKFGECSAAK 303
Query: 299 PDFMKAWEKWRAQIAKLECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCTLTCHWMELY 358
PDFMK E+W++QI KLECS FW+QCAH QT+EGLRNML+IM+GN + L TC+WMEL+
Sbjct: 304 PDFMKTRERWQSQITKLECSAFWVQCAHHQTREGLRNMLKIMIGNADCLRAATCNWMELF 363
Query: 359 IAHFLYIRPFTVGLESMYGLAQKCIQLKPMAASHRLMGLLIGILGENIEVVLAECSKGFG 418
++H LY+RPFT GL+ M+ LAQKC+Q KP+ SH+L+ LLIGILGEN EVVLAECSK FG
Sbjct: 364 VSHLLYLRPFTKGLDGMHSLAQKCVQSKPVNTSHKLLRLLIGILGENTEVVLAECSKEFG 423
Query: 419 PWMVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIYL 478
WMV HA+E+LTAGS + + L+HEE+ LGGI+MEELHRLVYAQVLSSH LTWQIAPIYL
Sbjct: 424 SWMVAHAMELLTAGSEEGEVLVHEEQRKLGGINMEELHRLVYAQVLSSHALTWQIAPIYL 483
Query: 479 TSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKKG 538
SC KQG+GLLE+L Y+QPV NQ+L+K+LEICRLYEL +VS+ +MKI+G+++WKHG+KG
Sbjct: 484 ASCEKQGLGLLELLFYRQPVQENQMLIKSLEICRLYELSNVSAKLMKISGVHHWKHGRKG 543
Query: 539 SGVYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLHN 598
SG++WLQQARDE L+ IAQQ+FDSVG+S+SDE+ +QWEGL++LLGSE + +GGL+FLH
Sbjct: 544 SGIFWLQQARDENCLSVIAQQLFDSVGKSLSDESLKQWEGLVELLGSESQISGGLDFLHK 603
Query: 599 YRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEERPXX 658
YRDFK+SL + DGKT DAA +AVE L+SLMK+P TPQRFWLPLLHDSLKLLNW ER
Sbjct: 604 YRDFKRSLKVVHDGKTIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKLLNWPERSLL 663
Query: 659 XXXXXXXXXXXXXXXSIARLRPDFIEADLPPHALSSVRLALATNLGRTTLEE 710
SIARLRP FIE++L A+ SVRLALATNLGR LEE
Sbjct: 664 NVTQTNLMLNKLQELSIARLRPGFIESELSAQAVGSVRLALATNLGRAFLEE 715
>UNIPROTKB|J3QL54 [details] [associations]
symbol:NUP85 "Nuclear pore complex protein Nup85"
species:9606 "Homo sapiens" [GO:0030032 "lamellipodium assembly"
evidence=IEA] [GO:0048246 "macrophage chemotaxis" evidence=IEA]
EMBL:AC022211 InterPro:IPR011502 Pfam:PF07575 HGNC:HGNC:8734
ChiTaRS:NUP85 ProteinModelPortal:J3QL54 Ensembl:ENST00000579324
Uniprot:J3QL54
Length = 544
Score = 273 (101.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 124/484 (25%), Positives = 199/484 (41%)
Query: 244 VVKLLRLHGSY-QLDQLGNRETENGLVEA-VAVLISKMPRMRPELEAGKLGECFKAKPDF 301
+V +L L G + Q+ ++E + A + ++ + R P L G + +
Sbjct: 87 LVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTMPILSPGNTQTLTELE--- 143
Query: 302 MKAWEKWRAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCHWMEL 357
+K W+ W + + L+ STF T L ++L+IMLG+ L L +W
Sbjct: 144 LK-WQHWHEECERYLQDSTF-------ATSPHLESLLKIMLGDEAALLEQKELLSNWYHF 195
Query: 358 YIAHFLYIRPFTVGLESMYGLAQKCIQL--KPMAASHRLMGLLIGILGENIEVVLAECSK 415
+ LY P TV ++ AQ + L ++ L +L+ +I V+ ECS
Sbjct: 196 LVTRLLYSNP-TVKPIDLHYYAQSSLDLFLGGESSPEPLDNILLAAFEFDIHQVIKECSI 254
Query: 416 GFGPW-MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIA 474
W V H ++L H L + + G +M E L YA L +HP WQ+
Sbjct: 255 ALSNWWFVAHLTDLL---DH---CKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLG 308
Query: 475 PIYLTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKH 534
Y C + G LE+ + + P++ Q LK L IC ++ +I KI M ++
Sbjct: 309 VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN 368
Query: 535 GKKGSGVYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLE 594
+ GS + W +A+D A A + D R + LI LG + L
Sbjct: 369 NRLGSALSWSIRAKDAA----FATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLT 424
Query: 595 FLHNYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEE 654
FL YR+F + + + DAA L+SLM + P+ FW+ LL D+L LL E
Sbjct: 425 FLGKYREFHR---MYGEKRFADAA----SLLLSLMTSRIAPRSFWMTLLTDALPLL---E 474
Query: 655 RPXXXXXXXXXXXXXXXXXSIARLRPDFIEAD--------LPPHALSSVRLALATNLGRT 706
+ + RP E+D + + +RL+LA NL R
Sbjct: 475 QKQVIFSAEQTYELMRCLEDLTSRRPVHGESDTEQLQDDDIETTKVEMLRLSLARNLARA 534
Query: 707 TLEE 710
+ E
Sbjct: 535 IIRE 538
Score = 43 (20.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 161 SNLKAAWELMESFYADKLSQAWLPERLVDWL----ADYDSLFSSTQETVHSKLVDFQKDL 216
S ++ W L E + + L L+DW+ + DSL + + + D +L
Sbjct: 28 SAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNL 87
Query: 217 VSLQVIE---DEPKYW---EVMSSALAVGWLDIVVKLLR 249
V++ V++ DE + E +S + G I+ L+R
Sbjct: 88 VTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMR 126
>UNIPROTKB|B4DMQ3 [details] [associations]
symbol:NUP85 "cDNA FLJ53138, highly similar to Homo sapiens
pericentrin 1 (PCNT1), mRNA" species:9606 "Homo sapiens"
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0048246
"macrophage chemotaxis" evidence=IEA] GO:GO:0030032 GO:GO:0048246
EMBL:AC022211 InterPro:IPR011502 Pfam:PF07575 HOVERGEN:HBG059778
UniGene:Hs.362817 HGNC:HGNC:8734 ChiTaRS:NUP85 EMBL:AK297574
IPI:IPI01014661 STRING:B4DMQ3 Ensembl:ENST00000541827
Uniprot:B4DMQ3
Length = 610
Score = 273 (101.2 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 124/484 (25%), Positives = 199/484 (41%)
Query: 244 VVKLLRLHGSY-QLDQLGNRETENGLVEA-VAVLISKMPRMRPELEAGKLGECFKAKPDF 301
+V +L L G + Q+ ++E + A + ++ + R P L G + +
Sbjct: 153 LVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTMPILSPGNTQTLTELE--- 209
Query: 302 MKAWEKWRAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCHWMEL 357
+K W+ W + + L+ STF T L ++L+IMLG+ L L +W
Sbjct: 210 LK-WQHWHEECERYLQDSTF-------ATSPHLESLLKIMLGDEAALLEQKELLSNWYHF 261
Query: 358 YIAHFLYIRPFTVGLESMYGLAQKCIQL--KPMAASHRLMGLLIGILGENIEVVLAECSK 415
+ LY P TV ++ AQ + L ++ L +L+ +I V+ ECS
Sbjct: 262 LVTRLLYSNP-TVKPIDLHYYAQSSLDLFLGGESSPEPLDNILLAAFEFDIHQVIKECSI 320
Query: 416 GFGPW-MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIA 474
W V H ++L H L + + G +M E L YA L +HP WQ+
Sbjct: 321 ALSNWWFVAHLTDLL---DH---CKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLG 374
Query: 475 PIYLTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKH 534
Y C + G LE+ + + P++ Q LK L IC ++ +I KI M ++
Sbjct: 375 VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN 434
Query: 535 GKKGSGVYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLE 594
+ GS + W +A+D A A + D R + LI LG + L
Sbjct: 435 NRLGSALSWSIRAKDAA----FATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLT 490
Query: 595 FLHNYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEE 654
FL YR+F + + + DAA L+SLM + P+ FW+ LL D+L LL E
Sbjct: 491 FLGKYREFHR---MYGEKRFADAA----SLLLSLMTSRIAPRSFWMTLLTDALPLL---E 540
Query: 655 RPXXXXXXXXXXXXXXXXXSIARLRPDFIEAD--------LPPHALSSVRLALATNLGRT 706
+ + RP E+D + + +RL+LA NL R
Sbjct: 541 QKQVIFSAEQTYELMRCLEDLTSRRPVHGESDTEQLQDDDIETTKVEMLRLSLARNLARA 600
Query: 707 TLEE 710
+ E
Sbjct: 601 IIRE 604
Score = 43 (20.2 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 161 SNLKAAWELMESFYADKLSQAWLPERLVDWL----ADYDSLFSSTQETVHSKLVDFQKDL 216
S ++ W L E + + L L+DW+ + DSL + + + D +L
Sbjct: 94 SAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNL 153
Query: 217 VSLQVIE---DEPKYW---EVMSSALAVGWLDIVVKLLR 249
V++ V++ DE + E +S + G I+ L+R
Sbjct: 154 VTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMR 192
>UNIPROTKB|Q9BW27 [details] [associations]
symbol:NUP85 "Nuclear pore complex protein Nup85"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0048246
"macrophage chemotaxis" evidence=IEA] [GO:0000777 "condensed
chromosome kinetochore" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 GO:GO:0005829
Reactome:REACT_116125 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0005819 GO:GO:0044281
GO:GO:0015031 GO:GO:0005975 GO:GO:0031965 GO:GO:0019221
GO:GO:0015758 GO:GO:0010827 GO:GO:0055085 EMBL:CH471099
GO:GO:0030032 GO:GO:0051028 GO:GO:0000236 GO:GO:0000777
GO:GO:0048246 GO:GO:0031080 eggNOG:NOG275863 KO:K14304
InterPro:IPR011502 Pfam:PF07575 CTD:79902 HOGENOM:HOG000230494
HOVERGEN:HBG059778 OMA:SICKIMA OrthoDB:EOG4229J7 EMBL:AF514995
EMBL:AF498261 EMBL:AK022611 EMBL:AL833893 EMBL:BC000697
IPI:IPI00790530 RefSeq:NP_079120.1 UniGene:Hs.362817
ProteinModelPortal:Q9BW27 IntAct:Q9BW27 MINT:MINT-1408017
STRING:Q9BW27 PhosphoSite:Q9BW27 DMDM:74733394 PaxDb:Q9BW27
PRIDE:Q9BW27 Ensembl:ENST00000245544 GeneID:79902 KEGG:hsa:79902
UCSC:uc002jng.1 GeneCards:GC17P073201 HGNC:HGNC:8734 MIM:170285
neXtProt:NX_Q9BW27 PharmGKB:PA142671241 InParanoid:Q9BW27
ChiTaRS:NUP85 GenomeRNAi:79902 NextBio:69751 ArrayExpress:Q9BW27
Bgee:Q9BW27 CleanEx:HS_NUP85 Genevestigator:Q9BW27 Uniprot:Q9BW27
Length = 656
Score = 273 (101.2 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 124/484 (25%), Positives = 199/484 (41%)
Query: 244 VVKLLRLHGSY-QLDQLGNRETENGLVEA-VAVLISKMPRMRPELEAGKLGECFKAKPDF 301
+V +L L G + Q+ ++E + A + ++ + R P L G + +
Sbjct: 199 LVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTMPILSPGNTQTLTELE--- 255
Query: 302 MKAWEKWRAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCHWMEL 357
+K W+ W + + L+ STF T L ++L+IMLG+ L L +W
Sbjct: 256 LK-WQHWHEECERYLQDSTF-------ATSPHLESLLKIMLGDEAALLEQKELLSNWYHF 307
Query: 358 YIAHFLYIRPFTVGLESMYGLAQKCIQL--KPMAASHRLMGLLIGILGENIEVVLAECSK 415
+ LY P TV ++ AQ + L ++ L +L+ +I V+ ECS
Sbjct: 308 LVTRLLYSNP-TVKPIDLHYYAQSSLDLFLGGESSPEPLDNILLAAFEFDIHQVIKECSI 366
Query: 416 GFGPW-MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIA 474
W V H ++L H L + + G +M E L YA L +HP WQ+
Sbjct: 367 ALSNWWFVAHLTDLL---DH---CKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLG 420
Query: 475 PIYLTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKH 534
Y C + G LE+ + + P++ Q LK L IC ++ +I KI M ++
Sbjct: 421 VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN 480
Query: 535 GKKGSGVYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLE 594
+ GS + W +A+D A A + D R + LI LG + L
Sbjct: 481 NRLGSALSWSIRAKDAA----FATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLT 536
Query: 595 FLHNYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEE 654
FL YR+F + + + DAA L+SLM + P+ FW+ LL D+L LL E
Sbjct: 537 FLGKYREFHR---MYGEKRFADAA----SLLLSLMTSRIAPRSFWMTLLTDALPLL---E 586
Query: 655 RPXXXXXXXXXXXXXXXXXSIARLRPDFIEAD--------LPPHALSSVRLALATNLGRT 706
+ + RP E+D + + +RL+LA NL R
Sbjct: 587 QKQVIFSAEQTYELMRCLEDLTSRRPVHGESDTEQLQDDDIETTKVEMLRLSLARNLARA 646
Query: 707 TLEE 710
+ E
Sbjct: 647 IIRE 650
Score = 43 (20.2 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 161 SNLKAAWELMESFYADKLSQAWLPERLVDWL----ADYDSLFSSTQETVHSKLVDFQKDL 216
S ++ W L E + + L L+DW+ + DSL + + + D +L
Sbjct: 140 SAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNL 199
Query: 217 VSLQVIE---DEPKYW---EVMSSALAVGWLDIVVKLLR 249
V++ V++ DE + E +S + G I+ L+R
Sbjct: 200 VTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMR 238
>RGD|1311942 [details] [associations]
symbol:Nup85 "nucleoporin 85" species:10116 "Rattus norvegicus"
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006935 "chemotaxis" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0030032 "lamellipodium
assembly" evidence=IEA;ISO] [GO:0031080 "nuclear pore outer ring"
evidence=ISO;ISS] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0048246 "macrophage chemotaxis" evidence=IEA;ISO] [GO:0051028
"mRNA transport" evidence=IEA] [GO:0000776 "kinetochore"
evidence=ISO] RGD:1311942 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0030032 GO:GO:0000922 GO:GO:0051028 GO:GO:0000777
GO:GO:0048246 GO:GO:0031080 eggNOG:NOG275863 KO:K14304
InterPro:IPR011502 Pfam:PF07575 CTD:79902
GeneTree:ENSGT00390000000204 HOGENOM:HOG000230494
HOVERGEN:HBG059778 OMA:SICKIMA OrthoDB:EOG4229J7 EMBL:BC098031
IPI:IPI00370340 RefSeq:NP_001020572.1 UniGene:Rn.198900
STRING:Q4QQS8 PRIDE:Q4QQS8 Ensembl:ENSRNOT00000005035 GeneID:287830
KEGG:rno:287830 InParanoid:Q4QQS8 NextBio:627107
Genevestigator:Q4QQS8 Uniprot:Q4QQS8
Length = 656
Score = 267 (99.0 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 114/421 (27%), Positives = 174/421 (41%)
Query: 305 WEKWRAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCHWMELYIA 360
W+ WR + + L+ +TF H L ++ +IMLG+ L L +W +
Sbjct: 258 WQHWREECERHLQDNTFAAN-PH------LESLCKIMLGDEATLLEQKELMSNWYHFLVT 310
Query: 361 HFLYIRPFTVGLESMYGLAQKCIQ--LKPMAASHRLMGLLIGILGENIEVVLAECSKGFG 418
LY P TV ++ AQ + L ++ L +L+ +I V+ ECS
Sbjct: 311 RLLYSNP-TVKPTDLHLYAQSSLDMFLGGESSPEPLDNILMAAFEFDIHQVIKECSIALS 369
Query: 419 PW-MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIY 477
W V H ++L H L + + G +M E L YA L +H WQ+ Y
Sbjct: 370 NWWFVAHLTDLL---DH---CRLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLGVDY 423
Query: 478 LTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKK 537
C + G LE+ + + P++ Q LK L IC ++ +I KI M ++ +
Sbjct: 424 FDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVGSICKILAMKAVRNNRL 483
Query: 538 GSGVYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLH 597
GS + W +A+D A A + D R + LI LG + L FL
Sbjct: 484 GSALSWSIRAKDAA----FATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLG 539
Query: 598 NYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEERPX 657
YR+F + + R G DAA L+SLM + P+ FW+ LL D+L LL E+
Sbjct: 540 KYREFHRLYGEKRFG---DAA----SLLLSLMTSQIAPRSFWMTLLTDALPLL---EQKQ 589
Query: 658 XXXXXXXXXXXXXXXXSIARLRPDFIEAD--------LPPHALSSVRLALATNLGRTTLE 709
+A RP+ E D + + +RLALA NL R +
Sbjct: 590 VIFSAEQTYELMRCLEDLASRRPECGEPDAQRLQDDDIETTKVEMLRLALARNLARAIIR 649
Query: 710 E 710
E
Sbjct: 650 E 650
Score = 47 (21.6 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 38/150 (25%), Positives = 61/150 (40%)
Query: 161 SNLKAAWELMESFYADKLSQAWLPERLVDWL----ADYDSLFSSTQETVH-SKLVDFQKD 215
S ++ W L E + + L L+DW+ + DSL + + H SK F +
Sbjct: 140 SAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSDHPSKHESFW-N 198
Query: 216 LVSLQVIE---DEPKYW---EVMSSALAVGWLDIVVKLLRLHGSYQLDQLGNRETENGLV 269
LV++ V++ DE + E +S + G ++ L+R + + GN +T L
Sbjct: 199 LVTVLVLQGRLDEARQMLSKEADASPSSAGMCRVLGDLMR---TMPILSPGNTQT---LT 252
Query: 270 EAVAVLISKMPRMRPELEAGKLGECFKAKP 299
E L K R E E F A P
Sbjct: 253 E----LELKWQHWREECERHLQDNTFAANP 278
>MGI|MGI:3046173 [details] [associations]
symbol:Nup85 "nucleoporin 85" species:10090 "Mus musculus"
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISA] [GO:0006810 "transport" evidence=IEA]
[GO:0006935 "chemotaxis" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019221 "cytokine-mediated signaling pathway" evidence=ISA]
[GO:0030032 "lamellipodium assembly" evidence=IDA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031727 "CCR2 chemokine
receptor binding" evidence=ISA] [GO:0048246 "macrophage chemotaxis"
evidence=IDA] [GO:0051028 "mRNA transport" evidence=IEA]
MGI:MGI:3046173 GO:GO:0005886 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0019221 GO:GO:0030032 GO:GO:0000922
GO:GO:0051028 GO:GO:0000777 GO:GO:0048246 GO:GO:0031727
GO:GO:0031080 EMBL:AL645470 eggNOG:NOG275863 KO:K14304
InterPro:IPR011502 Pfam:PF07575 CTD:79902
GeneTree:ENSGT00390000000204 HOGENOM:HOG000230494
HOVERGEN:HBG059778 OMA:SICKIMA OrthoDB:EOG4229J7 EMBL:AF498263
EMBL:AK017632 EMBL:BC079856 IPI:IPI00461532 RefSeq:NP_001002929.3
UniGene:Mm.4379 ProteinModelPortal:Q8R480 STRING:Q8R480
PhosphoSite:Q8R480 PaxDb:Q8R480 PRIDE:Q8R480
Ensembl:ENSMUST00000021085 Ensembl:ENSMUST00000140986
Ensembl:ENSMUST00000144473 GeneID:445007 KEGG:mmu:445007
UCSC:uc007mhx.2 InParanoid:Q8R480 NextBio:410914 Bgee:Q8R480
CleanEx:MM_NUP85 Genevestigator:Q8R480 Uniprot:Q8R480
Length = 656
Score = 270 (100.1 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 129/488 (26%), Positives = 204/488 (41%)
Query: 240 WLDIVVKLLRLHGSY-QLDQLGNRETE-NGLVEAVAVLISKMPRMRPELEAGKLGECFKA 297
W D+V L+ L G + Q+ +E + N + ++ + R P L G +
Sbjct: 197 W-DLVTVLV-LQGRLDEARQMLAKEADANPSCAGMCRVLGDLMRTMPILSPGNTQTLTEL 254
Query: 298 KPDFMKAWEKWRAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCH 353
+ +K W+ WR + + L+ +TF A+ + L ++ +IMLG+ L L +
Sbjct: 255 E---LK-WQHWREECERHLQDNTF---AANPR----LESLCKIMLGDEAALLEQKELLSN 303
Query: 354 WMELYIAHFLYIRPFTVGLESMYGLAQKCIQ--LKPMAASHRLMGLLIGILGENIEVVLA 411
W + LY P TV ++ AQ + L ++ L +L+ +I V+
Sbjct: 304 WYHFLVTRLLYSNP-TVKPIDLHFYAQSSLDMFLGGESSPEPLDNILMAAFEFDIHQVIK 362
Query: 412 ECSKGFGPW-MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLT 470
ECS W V H ++L H L + + G +M E L YA L +H
Sbjct: 363 ECSIALSNWWFVAHLTDLL---DH---CRLLQSHNLYFGSNMREFLLLEYASGLFAHHSL 416
Query: 471 WQIAPIYLTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMY 530
WQ+ Y C + G LE+ + + P++ Q LK L IC ++ +I KI M
Sbjct: 417 WQLGVDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVKSICKILAMK 476
Query: 531 NWKHGKKGSGVYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTA 590
++ + GS + W +A+D A A + D R + LI LGS +
Sbjct: 477 AVRNNRLGSALSWSIRAKDAA----FATLVSDRFLRDYCERGCFSDLDLIDNLGSAMMLS 532
Query: 591 GGLEFLHNYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLL 650
L FL YR+F + + R G DAA L+SLM + P+ FW+ LL D+L LL
Sbjct: 533 DRLTFLGKYREFHRLYGEKRFG---DAA----SLLLSLMTSQIAPRSFWMTLLTDALPLL 585
Query: 651 NWEERPXXXXXXXXXXXXXXXXXSIARLRPDFIEAD--------LPPHALSSVRLALATN 702
E+ +A RP+ E D + + +RLALA N
Sbjct: 586 ---EQKQVIFSAEQTYELMRCLEDLASGRPECGEPDAQRLQDDDIETTKVEMLRLALARN 642
Query: 703 LGRTTLEE 710
L R + E
Sbjct: 643 LARAIIRE 650
Score = 40 (19.1 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 161 SNLKAAWELMESFYADKLSQAWLPERLVDWL----ADYDSLFSSTQETVH-SKLVDFQKD 215
S ++ W L E + + L L+DW+ + DSL + + SK +F D
Sbjct: 140 SAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGGDNPSKHENFW-D 198
Query: 216 LVSLQVIE 223
LV++ V++
Sbjct: 199 LVTVLVLQ 206
>UNIPROTKB|F1RVX6 [details] [associations]
symbol:NUP85 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048246 "macrophage chemotaxis" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] GO:GO:0000776 GO:GO:0030032 GO:GO:0048246
GO:GO:0031080 KO:K14304 InterPro:IPR011502 Pfam:PF07575
GeneTree:ENSGT00390000000204 OMA:SICKIMA EMBL:CU928896
RefSeq:XP_003131259.1 Ensembl:ENSSSCT00000018732 GeneID:100526070
KEGG:ssc:100526070 Uniprot:F1RVX6
Length = 656
Score = 256 (95.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 128/512 (25%), Positives = 208/512 (40%)
Query: 215 DLVSLQVIEDEPKYWEVMSSALAVGWLDI--VVKLLRLHGSY-QLDQLGNRETENGLVEA 271
D V L V E + +V+ S D +V +L L G + Q+ ++E + A
Sbjct: 168 DWVRLHVCEVDSLSADVLGSENPSKHQDFWKLVTILVLQGRLDEARQMLSKEADASPTSA 227
Query: 272 -VAVLISKMPRMRPELEAGKLGECFKAKPDFMKAWEKWRAQIAK-LECSTFWIQCAHRQT 329
+ ++ + R P L G + + +K W+ W + + L+ TF H
Sbjct: 228 GMCRVLGDLMRTMPVLSPGNTQTLTELE---LK-WQHWHEECERHLQDGTF-ASSPH--- 279
Query: 330 QEGLRNMLQIMLGNTNNLCT---LTCHWMELYIAHFLYIRPFTVGLESMYGLAQKCIQL- 385
L ++ +IMLG+ L L +W + LY P TV ++ AQ + L
Sbjct: 280 ---LESLCKIMLGDEAALLEQKELLSNWYHFLVTRLLYSCP-TVKPMDLHCYAQSSLDLF 335
Query: 386 -KPMAASHRLMGLLIGILGENIEVVLAECSKGFGPW-MVTHAIEVLTAGSHQADTLLHEE 443
+++ L +L+ +I V+ ECS W V H ++L H L +
Sbjct: 336 LGGESSAEPLDNILLAAFEFDIHQVIKECSIALSNWWFVAHLTDLL---DH---CKLLQS 389
Query: 444 RDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIYLTSCIKQGMGLLEMLLYKQPVDHNQL 503
+ G +M E L YA L +H WQ+ Y C + G LE+ + + P+ Q
Sbjct: 390 HNLYFGSNMREFLLLEYASGLFAHHSLWQLGVDYFDHCPELGRVSLELHIERIPLSTEQK 449
Query: 504 LLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKKGSGVYWLQQARDEARLNRIAQQMFDS 563
LK L +C ++ +I KI M ++ + GS + W +A+D A A + D
Sbjct: 450 ALKVLRVCEQRQMTEQVRSICKILAMKAVRNNRLGSALSWSIRAKDAA----FATLVSDR 505
Query: 564 VGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLHNYRDFKKSLLQIRDGKTTDAARQAVE 623
R + LI LG + L FL YR+F + + R DAA
Sbjct: 506 FLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGKYREFHRLYGEKR---FVDAA----S 558
Query: 624 SLISLMKNPCTPQRFWLPLLHDSLKLLNWEERPXXXXXXXXXXXXXXXXXSI--ARLRPD 681
L+SLM + P+ FW+ LL D+L LL ++ S A PD
Sbjct: 559 LLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYELMRCLEDLISERPAHGEPD 618
Query: 682 ---FIEADLPPHALSSVRLALATNLGRTTLEE 710
+ D+ + +R+ LA NL R+ ++E
Sbjct: 619 AQQLQDDDIETTKVEMLRIGLARNLARSIIKE 650
>UNIPROTKB|F1PFE9 [details] [associations]
symbol:NUP85 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048246 "macrophage chemotaxis" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] GO:GO:0000776 GO:GO:0030032 GO:GO:0048246
GO:GO:0031080 InterPro:IPR011502 Pfam:PF07575
GeneTree:ENSGT00390000000204 OMA:SICKIMA EMBL:AAEX03006299
Ensembl:ENSCAFT00000007614 Uniprot:F1PFE9
Length = 656
Score = 258 (95.9 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 124/484 (25%), Positives = 201/484 (41%)
Query: 244 VVKLLRLHGSY-QLDQLGNRETE-NGLVEAVAVLISKMPRMRPELEAGKLGECFKAKPDF 301
+V +L L G + Q+ ++E + N + ++ + R P L G + +
Sbjct: 199 LVTILVLQGRLDEARQMLSKEADANPSSAGMCRILGDLMRTMPVLSPGNTQTLTELE--- 255
Query: 302 MKAWEKWRAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCHWMEL 357
+K W+ W + + L+ STF H L ++ +I+LG+ L L +W
Sbjct: 256 LK-WQHWHEECERHLQDSTF-AASPH------LESLCKILLGDEAALLEQKELLNNWYHF 307
Query: 358 YIAHFLYIRPFTVGLE-SMYGLAQKCIQLKPMAASHRLMGLLIGILGENIEVVLAECSKG 416
+ LY P ++ +Y + + L ++ L +L+ +I V+ ECS
Sbjct: 308 LVTRLLYSHPTVKPIDLHLYAQSSLDLFLGGESSPEPLDNILLAAFEFDIHQVIKECSIA 367
Query: 417 FGPW-MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAP 475
W V H ++L H L + + G +M E L YA L +H WQ+
Sbjct: 368 LSNWWFVAHLTDLL---DH---CKLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLGV 421
Query: 476 IYLTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHG 535
Y C + G LE+ + + P+ Q LK L IC ++ +I KI M ++
Sbjct: 422 DYFDYCPELGRVSLELHIERIPLSTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRNN 481
Query: 536 KKGSGVYWLQQARDEARLNRIAQQMF-DSVGRSISDENFRQWEGLIQLLGSEPKTAGGLE 594
+ GS + W +A+D A ++ + D R F + LI LG + L
Sbjct: 482 RLGSALSWSIRAKDAAFATLVSDRFLKDYCERGC----FSDLD-LIDNLGPAMMLSDRLT 536
Query: 595 FLHNYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEE 654
FL YR+F + + R DAA L+SLM + P+ FW+ LL D+L LL EE
Sbjct: 537 FLGKYREFHRFYGEKR---LADAA----SLLLSLMTSQIAPRSFWVILLIDALPLL--EE 587
Query: 655 RPXXXXXXXXXXXXXXXXXSIARLRPDFIEA--------DLPPHALSSVRLALATNLGRT 706
+ +R RP + E D+ L +RLALA NLGR
Sbjct: 588 KEVVFSAEQTYELMRCLEDFASR-RPVWREPGVQRLQKEDVENTKLEMLRLALARNLGRA 646
Query: 707 TLEE 710
++E
Sbjct: 647 IIKE 650
Score = 41 (19.5 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 161 SNLKAAWELMESFYADKLSQAWLPERLVDWL----ADYDSLFSSTQETVH-SKLVDFQKD 215
S ++ W L E + + L L+DW+ + DSL + + + SK F +
Sbjct: 140 SAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLLADVLGSENPSKHESFW-N 198
Query: 216 LVSLQVIE 223
LV++ V++
Sbjct: 199 LVTILVLQ 206
>UNIPROTKB|F1NRW5 [details] [associations]
symbol:NUP85 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0031080 "nuclear pore
outer ring" evidence=IEA] [GO:0048246 "macrophage chemotaxis"
evidence=IEA] GO:GO:0000776 GO:GO:0030032 GO:GO:0048246
GO:GO:0031080 InterPro:IPR011502 Pfam:PF07575
GeneTree:ENSGT00390000000204 OMA:SICKIMA EMBL:AADN02053651
IPI:IPI00602276 Ensembl:ENSGALT00000012947 ArrayExpress:F1NRW5
Uniprot:F1NRW5
Length = 675
Score = 243 (90.6 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 100/413 (24%), Positives = 164/413 (39%)
Query: 305 WEKWRAQIAKLECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCHWMELYIAH 361
W+ W EC + +Q + + ++ +I+LG+ N + L W +
Sbjct: 280 WQHWHE-----ECQRY-LQDGTFASNSHMESICKILLGDENAILEKKELMTTWYHFLVTR 333
Query: 362 FLYIRPFTVGLE-SMYGLAQKCIQLKPMAASHRLMGLLIGILGENIEVVLAECSKGFGP- 419
LY P +E Y + + L + L +L+ + V+ EC
Sbjct: 334 LLYSHPTVKPMELRFYAQSSMDMFLGEESNPEPLDTILMAAFEFELHQVIKECRYSVALS 393
Query: 420 --WMVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIY 477
W V H ++L H L + + G +M E L YA L SH WQ+ Y
Sbjct: 394 NWWFVAHLTDLL---DH---CKLLQSHNLYFGSNMREFLLLEYASGLFSHHSLWQLGVDY 447
Query: 478 LTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKK 537
C + G LE+ + + P++ Q LK L IC ++ +I KI M ++ +
Sbjct: 448 FDHCPEYGRVYLELHIERIPLNTEQKALKVLRICEQRQMHEQVRSICKIMAMKALRNNRL 507
Query: 538 GSGVYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLH 597
GS + W +A+D A I+ + + + + LI LG + L FL
Sbjct: 508 GSALSWSIRAKDAAFATLISDRFL----KDYCERGYFSDLDLIDNLGPSMLLSDRLTFLG 563
Query: 598 NYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEERPX 657
YR+F + + R ++AAR L+ LM P FW+ LL D+L LL +E
Sbjct: 564 KYREFHRLYGEKR---FSEAARL----LLMLMTAHIAPCSFWMTLLTDALPLLEQKEVIF 616
Query: 658 XXXXXXXXXXXXXXXXSIARLRPDFIEADLPPHALSSVRLALATNLGRTTLEE 710
+ + F + D+ + +RLALA NL R ++E
Sbjct: 617 SAEQTYELMRCLEDLTARKLDKQKFQDDDVETMKVEMLRLALARNLARVIVKE 669
Score = 51 (23.0 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 27/115 (23%), Positives = 49/115 (42%)
Query: 161 SNLKAAWELMESFYADKLSQAWLPERLVDW----LADYDSL----FSSTQETVHSKLVDF 212
S ++ W L E + + L RL+DW + D D++ S + H KL
Sbjct: 162 SAMELIWNLCEILFVEAAPAGPLLLRLLDWVQLHICDVDNMVREVLGSENPSKH-KLFWN 220
Query: 213 QKDLVSLQVIEDEPKYW---EVMSSALAVGWLDIVVKLLRLHGSYQLDQLGNRET 264
D+ LQ DE ++ E +++ ++ I+ L++ + LGN +T
Sbjct: 221 VVDIFVLQGRMDEARHLLSKEAIANPTSMNMYKILDDLMK---KMPVPSLGNTQT 272
>UNIPROTKB|Q3ZC98 [details] [associations]
symbol:NUP85 "Nuclear pore complex protein Nup85"
species:9913 "Bos taurus" [GO:0005819 "spindle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000777 "condensed
chromosome kinetochore" evidence=IEA] [GO:0048246 "macrophage
chemotaxis" evidence=IEA] [GO:0031080 "nuclear pore outer ring"
evidence=IEA] [GO:0030032 "lamellipodium assembly" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] GO:GO:0005737 GO:GO:0005819 GO:GO:0015031
GO:GO:0031965 GO:GO:0030032 GO:GO:0051028 GO:GO:0000777
GO:GO:0048246 GO:GO:0031080 eggNOG:NOG275863 KO:K14304
InterPro:IPR011502 Pfam:PF07575 EMBL:BT030744 EMBL:BC102703
IPI:IPI00708572 RefSeq:NP_001029559.1 UniGene:Bt.8317 STRING:Q3ZC98
PRIDE:Q3ZC98 Ensembl:ENSBTAT00000034688 GeneID:510540
KEGG:bta:510540 CTD:79902 GeneTree:ENSGT00390000000204
HOGENOM:HOG000230494 HOVERGEN:HBG059778 InParanoid:Q3ZC98
OMA:SICKIMA OrthoDB:EOG4229J7 NextBio:20869500 Uniprot:Q3ZC98
Length = 656
Score = 245 (91.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 123/513 (23%), Positives = 209/513 (40%)
Query: 215 DLVSLQVIEDEPKYWEVMSS---ALAVGWLDIVVKLLRLHGSY-QLDQLGNRETENGLVE 270
D V L V E + +V+ S + + ++V L+ L G + Q+ ++E ++
Sbjct: 168 DWVRLHVCEVDSLSADVLGSENPSKHESFWNLVTTLV-LQGRLDEARQMLSKEADSNPTS 226
Query: 271 A-VAVLISKMPRMRPELEAGKLGECFKAKPDFMKAWEKWRAQIAK-LECSTFWIQCAHRQ 328
A + ++ + R P L G + + W+ W + + L+ TF
Sbjct: 227 AGMCRVLGDLMRTMPILSPGNT----QTLTELELRWQHWHEECERHLQDGTF-------A 275
Query: 329 TQEGLRNMLQIMLGNTNNLCT---LTCHWMELYIAHFLYIRPFTVGLESMYGLAQKCIQL 385
+ L ++ +++LG+ L L +W + LY +P TV ++ AQ + L
Sbjct: 276 SNPHLESLCKVLLGDDAALLEHKELLSNWYHFLVTRLLYSQP-TVKPMDLHLYAQSSLDL 334
Query: 386 --KPMAASHRLMGLLIGILGENIEVVLAECSKGFGPW-MVTHAIEVLTAGSHQADTLLHE 442
++ L +L+ +I V+ ECS W V H ++L H L +
Sbjct: 335 FLGGESSPEPLDNILMAAFEFDIHQVIKECSIALSNWWFVAHLTDLL---DH---CKLLQ 388
Query: 443 ERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIYLTSCIKQGMGLLEMLLYKQPVDHNQ 502
+ G +M E L YA L +H WQ+ Y C + G LE+ + + P+ Q
Sbjct: 389 SHNLYFGSNMREFLLLEYASGLFAHHSLWQLGVDYCDHCPELGRVSLELHIERIPLTTEQ 448
Query: 503 LLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKKGSGVYWLQQARDEARLNRIAQQMFD 562
LK L +C ++ +I K+ M ++ + GS + W +A+D A A + D
Sbjct: 449 KALKVLRVCEQRQMTEQVRSICKVLAMKAVRNNRLGSALSWSIRAKDAA----FATLVSD 504
Query: 563 SVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLHNYRDFKKSLLQIRDGKTTDAARQAV 622
R + LI LG + L FL YR+F + + DAA
Sbjct: 505 RFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGKYREFHRLY---GEKCFVDAA---- 557
Query: 623 ESLISLMKNPCTPQRFWLPLLHDSLKLLNWEERPXXXXXXXXXXXXXXXXXSIARL--RP 680
L+SLM + P+ FW+ LL D+L LL ++ S L P
Sbjct: 558 SLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYELLRCLEDLTSGRPLCGEP 617
Query: 681 D---FIEADLPPHALSSVRLALATNLGRTTLEE 710
D + D+ + +RLALA NL R+ ++E
Sbjct: 618 DAQQLQDDDIETTKVEILRLALARNLARSIIKE 650
>ZFIN|ZDB-GENE-040801-145 [details] [associations]
symbol:nup85 "nucleoporin 85" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0031080
"nuclear pore outer ring" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] ZFIN:ZDB-GENE-040801-145 GO:GO:0015031 GO:GO:0031965
GO:GO:0051028 GO:GO:0031080 eggNOG:NOG275863 KO:K14304
InterPro:IPR011502 Pfam:PF07575 CTD:79902 HOGENOM:HOG000230494
HOVERGEN:HBG059778 OrthoDB:EOG4229J7 EMBL:BC078318 IPI:IPI00511893
RefSeq:NP_001003625.1 UniGene:Dr.98 STRING:Q6DBY0 PRIDE:Q6DBY0
GeneID:445231 KEGG:dre:445231 NextBio:20831993 Uniprot:Q6DBY0
Length = 649
Score = 242 (90.2 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 116/484 (23%), Positives = 195/484 (40%)
Query: 240 WLDIVVKLL---RLHGSYQL--DQLGNRETENGLVEAVAVLISKMPRMRPELEAGKLGEC 294
W D+V L+ R+ + Q+ Q R + + + + L+ MP P AG
Sbjct: 195 W-DVVTSLVLQGRMDEARQILSKQASLRMESSSVFKRMDTLLQTMPIFNP---AGA---- 246
Query: 295 FKAKPDFMKAWEKWRAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---L 350
+ +F W W + + L+ TF + L + +I+LG+ + + L
Sbjct: 247 -QTLTEFDVKWRHWHEECDRCLQDHTF-------ASSAELETLCKILLGDEDVILEQKDL 298
Query: 351 TCHWMELYIAHFLYIRPFTVGLESMYGLAQKCIQ--LKPMAASHRLMGLLIGILGENIEV 408
W ++ L+ P T+ ++ AQ + L P A L +L+ ++
Sbjct: 299 MSTWYHFLVSRLLFTHP-TIKPPDLHYYAQSSMNMFLGPRATPEPLDIILLSAFEFDLHQ 357
Query: 409 VLAECSKGFGPW-MVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSH 467
V+ +CS W V H ++L H LL + G ++ E L YA L +H
Sbjct: 358 VIKDCSIALNNWWFVAHLTDLL---DHCK--LLQSHNLHFGS-NLREFLVLEYASGLFTH 411
Query: 468 PLTWQIAPIYLTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIA 527
WQ+A YL C + G LE+ + + P+D + K L IC ++ +I KI
Sbjct: 412 HSLWQLAVDYLDHCPEFGRVYLELQIERVPLDTERKANKVLRICEDRQMSEQVRSICKIM 471
Query: 528 GMYNWKHGKKGSGVYWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEP 587
++ + GS + W +A+D A I+++ S F + ++ LG
Sbjct: 472 AKRALRNNRLGSALSWSIRAKDAALATLISERFLQDYSNKGS---FTDLD-VLDNLGPAM 527
Query: 588 KTAGGLEFLHNYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSL 647
+ L FL YR+F + + + +DAA+ L+SLM P+ W+ LL D+L
Sbjct: 528 LLSDRLTFLGKYREFHRLY---GENRFSDAAKL----LLSLMMAKIAPRSLWMTLLTDAL 580
Query: 648 KLLNWEERPXXXXXXXXXXXXXXXXXSIARLRPDFI-EADLPPHALSSVRLALATNLGRT 706
LL EE S + E DL +R+ALA NL
Sbjct: 581 PLLEQEEVIFTVDQTYELMSCLEELNSGTKDSNQMEQEEDLESTKTELLRVALARNLATA 640
Query: 707 TLEE 710
++E
Sbjct: 641 IVKE 644
>UNIPROTKB|Q6DK84 [details] [associations]
symbol:nup85 "Nuclear pore complex protein Nup85"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031080 "nuclear
pore outer ring" evidence=ISS] GO:GO:0015031 GO:GO:0031965
GO:GO:0051028 GO:GO:0031080 eggNOG:NOG275863 KO:K14304
InterPro:IPR011502 Pfam:PF07575 CTD:79902
GeneTree:ENSGT00390000000204 HOGENOM:HOG000230494
HOVERGEN:HBG059778 OrthoDB:EOG4229J7 EMBL:BC074592
RefSeq:NP_001004817.1 UniGene:Str.8414 STRING:Q6DK84
Ensembl:ENSXETT00000056747 GeneID:448067 KEGG:xtr:448067
Xenbase:XB-GENE-1008050 InParanoid:Q6DK84 OMA:XVSILSA Bgee:Q6DK84
Uniprot:Q6DK84
Length = 653
Score = 239 (89.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 106/424 (25%), Positives = 174/424 (41%)
Query: 300 DFMKAWEKWRAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCHWM 355
+F W+ WR + + L+ TF + + + ++++G+ + L W
Sbjct: 252 EFELKWQHWREECERHLQNGTF-------SSNPHMEVVCRVLVGDEEVILEKRDLMTTWY 304
Query: 356 ELYIAHFLYIRPFTVGLESMYGLAQKCIQ--LKPMAASHRLMGLLIGILGENIEVVLAEC 413
++ L+ P TV ++ AQ + L ++ L +L+ +I V+ E
Sbjct: 305 HFLVSRLLFKHP-TVKPTELHFYAQSSLDMFLAGNSSPEPLDNILLAAFEFDIHQVIKEF 363
Query: 414 S-KGFGPWMVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQ 472
S W V H ++L H L + + G +M E L YA L SH WQ
Sbjct: 364 SIVSSNWWFVAHLTDLL---DH---CQLFQAHNLYFGANMREFLLLDYASGLFSHHSLWQ 417
Query: 473 IAPIYLTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNW 532
+ Y C G LE+ + + P++ + LK L IC ++ +I K M +
Sbjct: 418 LGVDYFDYCPNLGHVYLELHMERVPLNTEKKALKALRICEKRQMTEQVRSICKTMAMQSL 477
Query: 533 KHGKKGSGVYWLQQARDEARLNRIAQQMFDSVGRSISDE-NFRQWEGLIQLLGSEPKTAG 591
+G+ GS + W +A+D A I+ + + S+ NF + LI LGS +
Sbjct: 478 CNGRLGSALSWSIRAKDAAFATLISDRFL----KEYSERGNFTDLD-LIDNLGSAMLLSD 532
Query: 592 GLEFLHNYRDFKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLN 651
L FL YR+F + Q + +A L+SLM P FWL LL D+L LL
Sbjct: 533 RLTFLGKYREFHRMYSQ-------EQFSEAASLLLSLMTARIAPCSFWLTLLLDALPLLE 585
Query: 652 WEERPXXXXXXXXXXXXXXXXXSIARL---RPDFIEAD--LPPHALSSVRLALATNLGRT 706
+++ A+L PD I+ + + +RLALA NL R
Sbjct: 586 -QKQVIFSAEQTYELMRCLEDRMAAKLDSTSPDEIQKQDSVDSTKIEMLRLALARNLARA 644
Query: 707 TLEE 710
+ E
Sbjct: 645 IVTE 648
Score = 48 (22.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 43/203 (21%), Positives = 75/203 (36%)
Query: 20 PVVYPLRHGLKPPISRLGISWSRGNSLRVTVFRQPSEDSENEVGGKAVEVRLDGRDGEIS 79
P P+ GL +G SW G+ L ++ + +E + + L D +I
Sbjct: 8 PAETPIP-GLGQQNRHIGFSWGPGDLL---LYETLYQKQGSETAARCPFMYLVRSDEDIY 63
Query: 80 DAQWRRIAYGSVSPFALLQSRKNSFASLSKISSTTSPFDAEWWEYVLEYSKDISSLLGNQ 139
R++ S S F LQ A S+ A+ + Y + + +
Sbjct: 64 SPVLRKLFNESHSIFVGLQKSAEENAGKSR--------KAQLVQVSRNYRSVLRACMEEM 115
Query: 140 TSTTQSLIEDPKEVLKKDPEPSNLKA---AWELMESFYADKLSQAWLPERLVDWL----A 192
+ ++S E P + K + S L A +W L E + + L L+DW+
Sbjct: 116 HALSESTRE-PSQNTKYISQISILSAMELSWNLCEILFIESAPAGPLLILLLDWVRLHVC 174
Query: 193 DYDSLFS----STQETVHSKLVD 211
+ D++ S + T H K D
Sbjct: 175 EVDNIVQDVLRSERPTEHEKFWD 197
>UNIPROTKB|Q68FJ0 [details] [associations]
symbol:nup85 "Nuclear pore complex protein Nup85"
species:8355 "Xenopus laevis" [GO:0031080 "nuclear pore outer ring"
evidence=ISS] GO:GO:0015031 GO:GO:0031965 GO:GO:0051028
GO:GO:0031080 KO:K14304 InterPro:IPR011502 Pfam:PF07575 CTD:79902
HOVERGEN:HBG059778 EMBL:BC079790 RefSeq:NP_001087440.1
UniGene:Xl.41587 GeneID:447264 KEGG:xla:447264
Xenbase:XB-GENE-1008056 Uniprot:Q68FJ0
Length = 653
Score = 228 (85.3 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 114/475 (24%), Positives = 189/475 (39%)
Query: 249 RLHGSYQLDQLGNRETENGLVEAVAVLISKMPRMRPELEAGKLGECFKAKPDFMKAWEKW 308
R++ + QL L + + ++ ++ + + P L G G + +F W+ W
Sbjct: 206 RMNEARQL--LAKEASTSASARSMCRVLDDLLKKMPMLHTG--GT--QTLTEFELKWQHW 259
Query: 309 RAQIAK-LECSTFWIQCAHRQTQEGLRNMLQIMLGNTNNLCT---LTCHWMELYIAHFLY 364
R + + L+ TF H + + +++LG+ L L W ++ L+
Sbjct: 260 REECERHLQNGTFSSN-VHMEA------VCRVLLGDEEVLLEKRDLMTTWYHFLVSRLLF 312
Query: 365 IRPFTVGLESMYGLAQKCIQ--LKPMAASHRLMGLLIGILGENIEVVLAECS-KGFGPWM 421
P TV ++ AQ + L + L +L+ +I V+ E S W
Sbjct: 313 KHP-TVKPTELHFYAQSSLDMFLAGDSCPEPLDNILLAAFEFDIHQVIKEFSIVSSNWWF 371
Query: 422 VTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIYLTSC 481
V H ++L H L + + G +M E L YA L SH WQ+ Y C
Sbjct: 372 VAHLTDLL---DH---CQLFQAHNLYFGANMREFLLLDYASGLFSHHSLWQLGVDYFDYC 425
Query: 482 IKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKKGSGV 541
G L++ + + P+ + LK L IC ++ +I K M + + + GS +
Sbjct: 426 PNLGREYLKLHMERIPLSTEKKALKALRICEQRQMTEQVRSICKTMAMQSLCNRRLGSAL 485
Query: 542 YWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLHNYRD 601
W +A+D A I+ + NF + LI LGS + L FL YR+
Sbjct: 486 SWSIRAKDAAFATLISDRFLKEY---CERGNFTDLD-LIDNLGSAMLLSDRLTFLGKYRE 541
Query: 602 FKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEERPXXXXX 661
F + Q + +A L+SLM P FWL LL D+L LL +++
Sbjct: 542 FHRMYSQ-------EQFSEAASLLLSLMTARIAPCSFWLTLLLDALPLLE-QKQVIFSAE 593
Query: 662 XXXXXXXXXXXXSIARLR---PDFIE---ADLPPHALSSVRLALATNLGRTTLEE 710
A+L PD I+ + + + +RLALA NL R + E
Sbjct: 594 QTYELMRCLEDRMAAKLESTSPDEIQKQDSSIDNTKVEMLRLALARNLARAIVTE 648
Score = 53 (23.7 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 39/200 (19%), Positives = 74/200 (37%)
Query: 20 PVVYPLRHGLKPPISRLGISWSRGNSLRVTVFRQPSEDSENEVGGKAVEVRLDGRDGEIS 79
P P+ GL +G SW G+ L Q +SE + + L D +I
Sbjct: 8 PAETPIP-GLGQQNRHIGFSWGPGDLLLYETLYQKQGNSET--AARCPFMYLVRSDEDIY 64
Query: 80 DAQWRRIAYGSVSPFALLQSRKNSFASLSKISSTTSPFDAEWWEYVLEYSKDISSLLGNQ 139
R++ S S F LQ + S+ A+ + Y + + +
Sbjct: 65 SPVLRKLFNESHSIFVGLQKSAEEASGKSR--------KAQLVQVSRNYRSVLRACMEEM 116
Query: 140 TSTTQSLIEDPKEVLKKDPEPSNLKAAWELMESFYADKLSQAWLPERLVDWL----ADYD 195
+ ++S E ++ + + S ++ +W L E + + L L++W+ + D
Sbjct: 117 HTLSESTRETAQKYISQISILSAMELSWNLCEILFIESAPAGPLLILLLEWVRLHVCEVD 176
Query: 196 SLFS----STQETVHSKLVD 211
++ S + T H K D
Sbjct: 177 NIVQDVLRSEKPTEHEKFWD 196
>UNIPROTKB|F5H0W7 [details] [associations]
symbol:NUP85 "Nuclear pore complex protein Nup85"
species:9606 "Homo sapiens" [GO:0030032 "lamellipodium assembly"
evidence=IEA] [GO:0048246 "macrophage chemotaxis" evidence=IEA]
GO:GO:0030032 GO:GO:0048246 EMBL:AC022211 InterPro:IPR011502
Pfam:PF07575 HGNC:HGNC:8734 ChiTaRS:NUP85 IPI:IPI00888760
Ensembl:ENST00000540768 UCSC:uc002jnh.1 ArrayExpress:F5H0W7
Bgee:F5H0W7 Uniprot:F5H0W7
Length = 259
Score = 196 (74.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 74/267 (27%), Positives = 111/267 (41%)
Query: 452 MEELHRLVYAQVLSSHPLTWQIAPIYLTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEIC 511
M E L YA L +HP WQ+ Y C + G LE+ + + P++ Q LK L IC
Sbjct: 1 MREFLLLEYASGLFAHPSLWQLGVDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRIC 60
Query: 512 RLYELDSVSSNIMKIAGMYNWKHGKKGSGVYWLQQARDEARLNRIAQQMFDSVGRSISDE 571
++ +I KI M ++ + GS + W +A+D A A + D R +
Sbjct: 61 EQRQMTEQVRSICKILAMKAVRNNRLGSALSWSIRAKDAA----FATLVSDRFLRDYCER 116
Query: 572 NFRQWEGLIQLLGSEPKTAGGLEFLHNYRDFKKSLLQIRDGKTTDAARQAVESLISLMKN 631
LI LG + L FL YR+F + + + DAA L+SLM +
Sbjct: 117 GCFSDLDLIDNLGPAMMLSDRLTFLGKYREFHR---MYGEKRFADAA----SLLLSLMTS 169
Query: 632 PCTPQRFWLPLLHDSLKLLNWEERPXXXXXXXXXXXXXXXXXSIARLRPDFIEAD----- 686
P+ FW+ LL D+L LL E+ + RP E+D
Sbjct: 170 RIAPRSFWMTLLTDALPLL---EQKQVIFSAEQTYELMRCLEDLTSRRPVHGESDTEQLQ 226
Query: 687 ---LPPHALSSVRLALATNLGRTTLEE 710
+ + +RL+LA NL R + E
Sbjct: 227 DDDIETTKVEMLRLSLARNLARAIIRE 253
>WB|WBGene00003788 [details] [associations]
symbol:npp-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0040017 GO:GO:0040035 GO:GO:0006997 EMBL:Z75713
eggNOG:NOG275863 KO:K14304 InterPro:IPR011502 Pfam:PF07575
GeneTree:ENSGT00390000000204 PIR:T24318 RefSeq:NP_492256.1
ProteinModelPortal:Q22078 IntAct:Q22078 MINT:MINT-227059
STRING:Q22078 PaxDb:Q22078 EnsemblMetazoa:T01G9.4.1
EnsemblMetazoa:T01G9.4.2 GeneID:172611 KEGG:cel:CELE_T01G9.4
CTD:172611 WormBase:T01G9.4 HOGENOM:HOG000017307 InParanoid:Q22078
OMA:IPLIMMP NextBio:876251 Uniprot:Q22078
Length = 598
Score = 154 (59.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 73/338 (21%), Positives = 141/338 (41%)
Query: 329 TQEGLRNMLQIMLGNTNNLCTLTCH----WMELYIAHFLYIR-PFTVGLESMYGLAQKCI 383
+ E + + +++LG L ++ W ++ F+ ++ PF +E + LA +C
Sbjct: 232 SNENFKYLTKLLLGEERYLVSMASRIFDTWWH-FLPFFVLVKNPFAGHVE-LIELADECR 289
Query: 384 QL------KPMAASHRLMGLLIGILGENIEVVLAECSKGFGPWMVTHAIEVLTAGSHQAD 437
L + A + + LI N + ++A PW+ H ++++ H++
Sbjct: 290 TLFVGEEEEEGAKENDVFWCLISKDDINFQQLIAS-----NPWLAVHLVDLI----HKST 340
Query: 438 TLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIYLTSCIKQGMGLLEMLLYKQP 497
L E + M ++H L YA VL SH W+I YL +C +G+ LE +
Sbjct: 341 --LDPEFE-----VMRKMHMLDYASVLISHSPLWEIGAGYLIACGTEGLLRLETHIEGLH 393
Query: 498 VDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKKGSGVYWLQQARDEARLNRIA 557
++ +++ + LEIC + L+ S + K G S + W + + ++
Sbjct: 394 IEDDEMAEQLLEICEEHRLEDAKSCVTNTMTFRYLKQGHWSSTLAWALKTGSKKTIDWTV 453
Query: 558 QQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLHNYRDFKKSLLQIRDGKTTDA 617
++ VG S DE L + + L FL++Y+ F K + G D
Sbjct: 454 SRI---VGSSSKDE-LAALRVLSSITNHSVLSLPSLTFLYSYQRFVKMM---HCGDVLDC 506
Query: 618 ARQAVESLISLMKNPCTPQRFWLPLLHDSLKLLNWEER 655
V+ LI L+ P P +++ L + ++ + R
Sbjct: 507 ----VQHLIPLIMMPDVPTQYYYDLFDYLITIIKEDGR 540
Score = 76 (31.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 165 AAWELMESFYADKLSQAWLPERLVDWLADYDSLFSSTQETVHSKLVDFQKDLVSLQVIED 224
A W L E + + + + L+ W + F+ ++ + S V++ L + I +
Sbjct: 108 ALWSLYEKLWFGRGDSSICAD-LISWA---NQSFTFSRGAMESA-VEY---LHPGKTIPE 159
Query: 225 EPKYWE-VMSSALAVGWLDIVVKLLRLHGSYQ-----LDQLGNRETENGLVEAVAVLISK 278
E YW+ V S L+ + D V +LL LHG ++ L EN + EA+A +++
Sbjct: 160 E--YWKGVAVSLLSCNFSDCV-ELLELHGGGSECDAFIEALTFFNPENLVDEALANTVNE 216
Query: 279 MPR-MRPELEAGKLG--ECFKAKPDFMKAWEKWRAQIAKLECSTFW 321
MR L +GK G E FK + E++ +A T+W
Sbjct: 217 WKDIMRENLTSGKYGSNENFKYLTKLLLGEERYLVSMASRIFDTWW 262
>FB|FBgn0034310 [details] [associations]
symbol:Nup75 "Nucleoporin 75kD" species:7227 "Drosophila
melanogaster" [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0017056
"structural constituent of nuclear pore" evidence=ISS] [GO:0007184
"SMAD protein import into nucleus" evidence=IMP] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
GO:GO:0007184 eggNOG:NOG275863 InterPro:IPR011502 Pfam:PF07575
EMBL:EF057923 ProteinModelPortal:A1YK00 STRING:A1YK00 PaxDb:A1YK00
PRIDE:A1YK00 FlyBase:FBgn0034310 InParanoid:A1YK00
OrthoDB:EOG4HX3G6 Bgee:A1YK00 Uniprot:A1YK00
Length = 668
Score = 168 (64.2 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 62/289 (21%), Positives = 131/289 (45%)
Query: 366 RPFTVGLESMYGLAQKCIQLKPMAASHRLMGLLIGILGENIEVVLAECSK-GFGPWMVTH 424
+PF + + + L + C+ L+P + ++ ++ ++ + + + K W TH
Sbjct: 319 KPFELKIAAAKWLNRWCL-LRPEREQCSMNRMVSQLMDHDLRLFIYDAQKLNDTHWFSTH 377
Query: 425 AIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVY---AQVLSSHPLTWQIAPIYLTSC 481
I+++ H + +++N+ ++ H ++Y + +++SH + WQ+ YL C
Sbjct: 378 LIDLI---HHCGQLKSYFDQNNIDLPALR--HSMIYEYGSYLMTSHNM-WQLGIDYLDCC 431
Query: 482 IKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKKGSGV 541
++G +E+LL + + + K + + R L SV I K+ ++ + + G+ +
Sbjct: 432 KQEGQAAIELLLPRITLRSERQATKLINLARQRGLISVEREICKVLSKRSYDNERYGNAL 491
Query: 542 YWLQQARDEARLNRIAQQMFDSVGRSISDENFRQWEGLIQLLGSEPKTAGGLEFLHNYRD 601
W +++D + +A D + + S I +G + L FL Y +
Sbjct: 492 EWAIRSKDVLLVTAVA----DFILKHYSKTGCMLCPDTIANVGGRMFASPRLVFLSKYFE 547
Query: 602 FKKSLLQIRDGKTTDAARQAVESLISLMKNPCTPQRFWLPLLHDSLKLL 650
F + +T D A E L++L+++ TP FW LL DS+ LL
Sbjct: 548 FYEFY------RTRDFL-SASELLVNLLESKITPDYFWPSLLIDSMPLL 589
Score = 58 (25.5 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 167 WELMESFYADKLSQAWLPERLVDWLADYDSLFSSTQETVHSKLVDFQKDLVSL-QVIEDE 225
W L E Y +Q +P+ L+DW + F S H++ D DL+ + + +
Sbjct: 151 WHLFEILYIQS-NQLVVPQ-LLDW-----ARFHSP----HAE--DRATDLLLMGEEASES 197
Query: 226 PKYWEVMSSALAVGWLDIVVKLL 248
YW ++ S + +G +D+ +L
Sbjct: 198 DDYWSIVKSLIMLGEIDVTRAVL 220
>DICTYBASE|DDB_G0285415 [details] [associations]
symbol:nup85 "nucleoporin 85" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0285415 GenomeReviews:CM000153_GR GO:GO:0015031
EMBL:AAFI02000079 GO:GO:0031965 GO:GO:0005643 GO:GO:0051028
eggNOG:NOG275863 KO:K14304 InterPro:IPR011502 Pfam:PF07575
RefSeq:XP_638280.1 PRIDE:Q54NA0 EnsemblProtists:DDB0235247
GeneID:8625088 KEGG:ddi:DDB_G0285415 InParanoid:Q54NA0 OMA:CILIARE
Uniprot:Q54NA0
Length = 890
Score = 160 (61.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 70/386 (18%), Positives = 166/386 (43%)
Query: 194 YDSLFSSTQETVHSKLVDF----QKDL---VSLQVIED--EPKYWEVMSSALAVGWLDIV 244
Y S+ SS+ ++L+D +K+L + Q +D + +Y+ ++ L G +D V
Sbjct: 349 YFSVSSSSNSVSPTQLLDCIELERKELLNSIEQQGTQDPMDSEYYNQIARLLVCGCIDQV 408
Query: 245 VKLLRL-----HGSYQLDQLGNRETENGLVEAVAVLISKMPRMRPELEAGKLGECFKAKP 299
++ L + + Q+ + N L++ ++S +P + + G G
Sbjct: 409 IQQLNILSRAPRSASQIKSTSRKSPINLLID----ILSSIPLKKKSINGG--GGAPLYPN 462
Query: 300 DFMKAWEKWRAQIAKLECSTFWI-QCAHRQTQEGLRNMLQIMLGNTNNLCTLTCH-WMEL 357
+ + W KW + K+ + Q E L +++I+LG+ + + TC+ +++L
Sbjct: 463 EHLIQWNKWHQETQKILSQYIESGSSSTNQVDENLLPIVKILLGDQQTIMS-TCNSFLQL 521
Query: 358 YIAHFLYIRPFTVGLESMYGLAQKCIQLKPMAASHRLMGLLIGILGENIEVVLAECSKGF 417
+++ L++ +T + L +C Q + A + + + +++++ L + K
Sbjct: 522 VVSNILFVE-YTTSTTQLRQLFTQCYQT--IQAPTTVDKIFLSFATKDLDITLKKIFKHS 578
Query: 418 GPWMVTHAIEVLTAGSHQADTLLHEERDNLGGISMEELHRLVYAQVLSSHPLTWQIAPIY 477
W+ H ++L + L + E L I E + Q L+S I Y
Sbjct: 579 PAWLAVHLSDLLYHHPYVMRKLPNSE-SQLTNI--REYLLSDFGQSLASDSSLLSIGCNY 635
Query: 478 LTSCIKQGMGLLEMLLYKQPVDHNQLLLKNLEICRLYELDSVSSNIMKIAGMYNWKHGKK 537
L G+ +++ + +QP+ + +K L+ + ++I K+ + ++K +
Sbjct: 636 LKYVKNGGLEMIDQFISRQPIHFEKNAIKMLD--KWATSVETKNSIYKMLSLQDFKRKRY 693
Query: 538 GSGVYWLQQARDEARLNRIAQQMFDS 563
+ + WL A D + + ++ + ++
Sbjct: 694 AASLNWLMLANDNSHITLLSNYLLEN 719
Score = 59 (25.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 624 SLISLMKNPCTPQRFWLPLLHDSLKLL 650
SL + K+ P+RFWL LL D + LL
Sbjct: 806 SLCLMFKDRVIPKRFWLRLLIDCVPLL 832
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 711 694 0.00081 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 636 (68 KB)
Total size of DFA: 413 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.57u 0.11s 60.68t Elapsed: 00:00:03
Total cpu time: 60.57u 0.11s 60.68t Elapsed: 00:00:03
Start: Mon May 20 19:17:04 2013 End: Mon May 20 19:17:07 2013