Query 005157
Match_columns 711
No_of_seqs 390 out of 2035
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 17:08:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 3.7E-40 1.3E-44 351.6 24.0 253 82-362 20-307 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 2.2E-36 7.4E-41 322.6 27.0 261 84-372 8-306 (312)
3 3tc8_A Leucine aminopeptidase; 100.0 6E-36 2E-40 319.3 26.5 250 81-362 19-308 (309)
4 3gux_A Putative Zn-dependent e 100.0 2.9E-35 9.8E-40 314.5 27.0 249 82-362 22-312 (314)
5 4fai_A CG5976, isoform B; alph 100.0 1.8E-35 6.3E-40 318.2 23.8 252 85-362 36-321 (330)
6 3pb6_X Glutaminyl-peptide cycl 100.0 2.5E-34 8.6E-39 309.0 23.6 253 82-363 34-327 (330)
7 2afw_A Glutaminyl-peptide cycl 100.0 1E-32 3.6E-37 296.6 24.6 268 67-363 9-326 (329)
8 1tkj_A Aminopeptidase, SGAP; d 100.0 2.7E-32 9.3E-37 287.3 26.5 255 82-370 2-282 (284)
9 1rtq_A Bacterial leucyl aminop 100.0 1.6E-30 5.6E-35 275.6 23.0 260 82-370 15-293 (299)
10 3kas_A Transferrin receptor pr 100.0 3.8E-30 1.3E-34 297.4 17.0 209 160-373 264-491 (640)
11 3fed_A Glutamate carboxypeptid 100.0 4.2E-29 1.4E-33 291.3 12.6 209 159-372 309-553 (707)
12 3iib_A Peptidase M28; YP_92679 99.9 1.5E-27 5E-32 266.5 17.8 199 161-369 234-436 (444)
13 2ek8_A Aminopeptidase; metallo 99.9 3.8E-26 1.3E-30 253.2 18.7 198 162-372 203-408 (421)
14 3k9t_A Putative peptidase; str 99.8 2.7E-20 9.2E-25 202.1 20.4 178 169-367 174-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.7 2.6E-17 8.8E-22 171.5 18.9 232 87-365 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 1.5E-17 5E-22 173.2 15.4 231 87-365 6-268 (268)
17 1q7l_A Aminoacylase-1; catalys 99.7 7.5E-16 2.6E-20 153.4 15.8 134 83-246 6-161 (198)
18 1vhe_A Aminopeptidase/glucanas 99.6 2E-15 6.7E-20 164.5 18.1 226 87-366 7-355 (373)
19 1y0y_A FRV operon protein FRVX 99.6 2.5E-15 8.4E-20 162.4 18.0 220 89-365 8-350 (353)
20 2gre_A Deblocking aminopeptida 99.6 3.8E-15 1.3E-19 160.8 16.6 223 85-361 4-343 (349)
21 2wyr_A Cobalt-activated peptid 99.6 5E-15 1.7E-19 158.5 16.3 147 197-362 171-331 (332)
22 2fvg_A Endoglucanase; TM1049, 99.5 2.9E-14 9.9E-19 153.3 13.1 219 92-365 3-335 (340)
23 3n5f_A L-carbamoylase, N-carba 99.5 2.5E-13 8.6E-18 149.1 16.9 130 84-247 2-143 (408)
24 2zog_A Cytosolic non-specific 99.5 5.4E-13 1.8E-17 149.3 19.1 156 85-261 18-200 (479)
25 1cg2_A Carboxypeptidase G2; me 99.4 7E-13 2.4E-17 144.7 15.3 147 85-263 17-181 (393)
26 2pok_A Peptidase, M20/M25/M40 99.4 1.5E-12 5.1E-17 146.0 14.3 145 86-261 42-210 (481)
27 3ct9_A Acetylornithine deacety 99.4 3.2E-12 1.1E-16 138.0 16.0 135 86-262 10-164 (356)
28 3ife_A Peptidase T; metallopep 99.4 1.3E-12 4.5E-17 144.7 13.1 140 86-261 26-224 (434)
29 3pfo_A Putative acetylornithin 99.4 3.8E-12 1.3E-16 140.4 15.7 159 86-263 25-205 (433)
30 3dlj_A Beta-Ala-His dipeptidas 99.4 9.5E-12 3.2E-16 139.8 18.6 156 85-261 23-207 (485)
31 2v8h_A Beta-alanine synthase; 99.3 4.8E-12 1.6E-16 142.0 14.5 128 83-245 28-175 (474)
32 3gb0_A Peptidase T; NP_980509. 99.3 5.2E-12 1.8E-16 136.6 13.4 148 83-262 2-167 (373)
33 3tx8_A Succinyl-diaminopimelat 99.3 7.6E-12 2.6E-16 135.1 13.8 138 87-261 13-166 (369)
34 1z2l_A Allantoate amidohydrola 99.3 6.7E-12 2.3E-16 138.1 13.7 127 85-245 7-145 (423)
35 1vho_A Endoglucanase; structur 99.3 3.5E-11 1.2E-15 129.2 18.3 226 88-366 6-337 (346)
36 1ylo_A Hypothetical protein SF 99.3 3.3E-11 1.1E-15 129.4 17.0 220 91-364 7-337 (348)
37 2rb7_A Peptidase, M20/M25/M40 99.3 7.8E-12 2.7E-16 135.4 12.1 138 85-260 4-163 (364)
38 1lfw_A PEPV; hydrolase, dipept 99.3 6.7E-11 2.3E-15 131.9 17.8 127 85-248 12-168 (470)
39 1vgy_A Succinyl-diaminopimelat 99.3 2E-11 7E-16 133.1 12.8 141 85-261 4-167 (393)
40 3rza_A Tripeptidase; phosphory 99.2 2.1E-11 7.1E-16 133.3 12.0 151 81-261 18-187 (396)
41 3kl9_A PEPA, glutamyl aminopep 99.2 9.6E-11 3.3E-15 127.0 16.9 225 87-364 3-345 (355)
42 1fno_A Peptidase T; metallo pe 99.2 1.3E-11 4.5E-16 135.7 10.2 138 87-262 2-198 (417)
43 3khx_A Putative dipeptidase sa 99.2 5.3E-11 1.8E-15 134.2 15.2 128 85-249 32-188 (492)
44 3isz_A Succinyl-diaminopimelat 99.2 9.4E-11 3.2E-15 126.3 14.5 138 87-260 3-163 (377)
45 3pfe_A Succinyl-diaminopimelat 99.2 4.9E-11 1.7E-15 133.7 12.4 145 87-261 18-192 (472)
46 3mru_A Aminoacyl-histidine dip 99.2 4.5E-11 1.6E-15 134.7 12.1 140 82-262 9-175 (490)
47 3cpx_A Aminopeptidase, M42 fam 99.2 5E-11 1.7E-15 127.3 9.2 224 88-362 18-320 (321)
48 1xmb_A IAA-amino acid hydrolas 99.1 5.5E-10 1.9E-14 123.0 17.2 135 87-260 28-176 (418)
49 2f7v_A Aectylcitrulline deacet 99.1 1.5E-10 5.1E-15 125.3 12.0 130 86-262 8-160 (369)
50 2qyv_A XAA-His dipeptidase; YP 99.1 2.9E-10 9.8E-15 127.7 12.4 139 83-262 7-172 (487)
51 2vpu_A TET3, 354AA long hypoth 99.1 1.7E-09 5.8E-14 117.1 17.8 223 88-365 10-349 (354)
52 1ysj_A Protein YXEP; M20 famil 99.1 8.2E-10 2.8E-14 121.1 15.5 137 86-259 31-181 (404)
53 3ram_A HMRA protein; two-domai 99.0 1.7E-09 5.9E-14 118.4 12.1 141 86-261 15-157 (394)
54 3isx_A Endoglucanase; TM1050, 98.9 3.3E-08 1.1E-12 106.6 17.1 213 90-360 14-341 (343)
55 3io1_A Aminobenzoyl-glutamate 98.8 3.9E-08 1.3E-12 109.3 16.0 159 86-260 13-209 (445)
56 2wzn_A TET3, 354AA long hypoth 98.5 1.4E-06 4.9E-11 89.9 16.7 57 306-367 294-351 (354)
57 2ek8_A Aminopeptidase; metallo 94.1 0.06 2.1E-06 59.0 6.5 44 81-125 10-53 (421)
58 3iib_A Peptidase M28; YP_92679 93.4 0.089 3E-06 58.2 6.5 42 84-125 18-60 (444)
59 2ijz_A Probable M18-family ami 93.3 0.18 6.2E-06 55.6 8.6 152 194-360 230-422 (428)
60 2glf_A Probable M18-family ami 92.4 0.18 6E-06 56.1 6.9 151 196-362 246-449 (450)
61 3fed_A Glutamate carboxypeptid 87.6 0.72 2.5E-05 54.0 7.0 43 82-125 20-62 (707)
62 3vat_A Dnpep, aspartyl aminope 81.8 1.4 4.9E-05 49.3 5.7 160 195-365 281-488 (496)
63 3kas_A Transferrin receptor pr 80.9 0.54 1.9E-05 54.4 2.0 44 83-126 14-59 (640)
64 2glj_A Probable M18-family ami 78.9 0.6 2E-05 52.0 1.4 46 195-244 257-302 (461)
65 1y7e_A Probable M18-family ami 76.8 0.41 1.4E-05 53.2 -0.7 46 196-244 252-297 (458)
66 1q7l_B Aminoacylase-1; catalys 66.6 11 0.00037 31.4 6.1 59 305-367 23-82 (88)
67 2lx0_A Membrane fusion protein 44.4 21 0.00072 23.8 3.1 18 631-648 7-24 (32)
68 2ijz_A Probable M18-family ami 37.7 16 0.00055 40.0 3.0 73 105-192 14-86 (428)
69 2l8s_A Integrin alpha-1; trans 36.9 54 0.0018 25.5 4.9 37 621-659 4-40 (54)
70 2glf_A Probable M18-family ami 35.0 75 0.0026 35.0 7.8 68 106-192 30-97 (450)
71 3rza_A Tripeptidase; phosphory 23.8 84 0.0029 33.2 5.6 55 306-366 340-394 (396)
72 1cg2_A Carboxypeptidase G2; me 23.4 43 0.0015 35.4 3.2 56 305-365 335-391 (393)
73 3gb0_A Peptidase T; NP_980509. 22.2 96 0.0033 32.2 5.6 52 306-363 320-371 (373)
74 3pfo_A Putative acetylornithin 21.7 62 0.0021 34.5 4.1 56 306-366 375-430 (433)
75 2knc_A Integrin alpha-IIB; tra 20.2 1.7E+02 0.0057 22.7 5.0 34 623-658 9-42 (54)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.7e-40 Score=351.59 Aligned_cols=253 Identities=19% Similarity=0.205 Sum_probs=197.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005157 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (711)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~ 161 (711)
++||++||+++|++++++|||..||++++++++||.++|++++ .+++.|.|..... ...+.+
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g------~~v~~q~~~~~~~------------~~~~~~ 81 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFG------AKVTNQYADLIAY------------DGTLLK 81 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEECT------------TSCEEE
T ss_pred CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcC------CeeEEEeEEeccC------------CCCcce
Confidence 4799999999999999999999999999999999999999998 4677766554210 112236
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCcccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEE
Q 005157 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (711)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s-------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~fl 228 (711)
..|||++++|+ +++.|+++|||||++.+ +||+||++|||+|||++|.|.+ .+++++|+|+
T Consensus 82 ~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~--~~~~~~i~~~ 154 (309)
T 4fuu_A 82 ARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQ--QQPELGIDII 154 (309)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHH--SCCSSEEEEE
T ss_pred eEEEEEEECCC-----CCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhh--cCCCCceEEE
Confidence 78999999985 45789999999999754 6999999999999999999987 4789999999
Q ss_pred EeCCCCCCC--------------cchHHHHhcCC-CcCCceEEEEeecCcCCCCccccccCC---CHHHHHHHHHHccCC
Q 005157 229 FNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAVDLEAMGIGGRSALFQAGP---NLWAVENFAAVAKYP 290 (711)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~h~-~~~~v~a~inLD~~G~gG~~~lfqtg~---~~~l~~~~~~~a~~p 290 (711)
|+++||.|+ .||+.|+++++ +..++.++||+||+|.+++....+... .+.+.+.+.+.....
T Consensus 155 ~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T 4fuu_A 155 FLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKA 234 (309)
T ss_dssp EECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHT
T ss_pred eecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHhc
Confidence 999999995 79999997654 457899999999999888665444222 234444444432211
Q ss_pred CCcccccccccCCCCCCCCchHHHhhcCCceEEEEeeeC----CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005157 291 SGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD----KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (711)
Q Consensus 291 ~~~~l~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~----~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~ 362 (711)
..... ...+.+. ...+||.+|.+.+|||+++++... ..++|||++||+|+||+++||++|+++++++.+
T Consensus 235 ~~~~~--~~~~~~~-~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 235 GYGKT--FIDERGD-TITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp TCTTT--EEEEECC-CCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred CCccc--ccccCCC-CCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence 11100 0112222 246799999876899999998643 245899999999999999999999999999874
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=2.2e-36 Score=322.55 Aligned_cols=261 Identities=18% Similarity=0.259 Sum_probs=195.5
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005157 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (711)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~ 163 (711)
-++....+.|+.| ++||.+||++++++++||.++|+++| +++++|.|...... ..+.+..
T Consensus 8 d~~~~~~~~l~~i--l~PR~~gs~~~~~~~~~i~~~l~~~g------~~v~~~~f~~~~~~------------~~~~~~~ 67 (312)
T 4f9u_A 8 DDEVHFNRTLDSI--LVPRVVGSRGHQQVREYLVQSLNGLG------FQTEVDEFKQRVPV------------FGELTFA 67 (312)
T ss_dssp CCHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEETT------------TEEEEEE
T ss_pred CHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEeEEEecCC------------CCceeEE
Confidence 3555666667776 46999999999999999999999998 56777776643110 0123678
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecCcccC-----CCCCCCCChhHHHHHHHHHHHHHhc-----CCCCCCcEEEEEeCCC
Q 005157 164 HIVLRILPKYASEAGENAILVSSHIDTVS-----AGEGAGDCSSCVAVMLELARVMSQW-----AHEFKNAVIFLFNTGE 233 (711)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~-----~spGA~Dd~sGva~~LE~ar~L~~~-----~~~~~~~I~flf~~~E 233 (711)
|||++++|+ +++.|+++|||||++ ..+||+||++|||+|||++|.|.+. +.+|+++|+|+|+++|
T Consensus 68 Nii~~~~~~-----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaE 142 (312)
T 4f9u_A 68 NVVGTINPQ-----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGE 142 (312)
T ss_dssp EEEEEESTT-----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCC
T ss_pred EEEEEECCC-----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCc
Confidence 999999985 457899999999985 3589999999999999999999752 4679999999999999
Q ss_pred CCC--------CcchHHHHhcCCCc-------------CCceEEEEeecCcCCCCccc--cccCC--CHHHH---HHHHH
Q 005157 234 EEG--------LNGAHSFVTQHPWS-------------TTIRVAVDLEAMGIGGRSAL--FQAGP--NLWAV---ENFAA 285 (711)
Q Consensus 234 E~g--------l~GS~~f~~~h~~~-------------~~v~a~inLD~~G~gG~~~l--fqtg~--~~~l~---~~~~~ 285 (711)
|.| +.||++|++++++. .++.+++|+|++|..++... +..+. .+.+. +.+.+
T Consensus 143 E~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 222 (312)
T 4f9u_A 143 EAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRT 222 (312)
T ss_dssp SCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHH
Confidence 988 89999999876431 46889999999998776542 22111 11111 22222
Q ss_pred HccCCCCcccccccccCCCCCCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005157 286 VAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (711)
Q Consensus 286 ~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~ 365 (711)
....+............+ ..+|||.+|.+ .|||++++...+..++|||+.||+|+||+++|+++++.+.+++.++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~ 299 (312)
T 4f9u_A 223 AGQLEGNNNMFLSRVSGG--LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLK 299 (312)
T ss_dssp TTCSSSSCCCEEEEECSS--CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccCCC--CCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 211111111111111112 24689999998 899999999888788899999999999999999999999999998887
Q ss_pred CCCCCCC
Q 005157 366 STSIPKG 372 (711)
Q Consensus 366 ~~~l~~~ 372 (711)
.+..|.+
T Consensus 300 ~~~~P~d 306 (312)
T 4f9u_A 300 RHTSPVN 306 (312)
T ss_dssp HCCSCCC
T ss_pred CCCCCCc
Confidence 7666643
No 3
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=6e-36 Score=319.29 Aligned_cols=250 Identities=19% Similarity=0.243 Sum_probs=197.9
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005157 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (711)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~ 160 (711)
..+|+++|++++|++|+++++|..||+++.++++||.++++++| +++++|.+.... ..+ .+.
T Consensus 19 ~~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~---------~~g---~~~ 80 (309)
T 3tc8_A 19 VPDFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFG------AKVYQQEAILTA---------YDG---TKL 80 (309)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TTS---CEE
T ss_pred ccccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEEeeccc---------cCC---Ccc
Confidence 46899999999999999999999999999999999999999998 456666654321 001 133
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCcccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 005157 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (711)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s-------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~f 227 (711)
+..|||++++|+ +++.|+++||+|||+.+ +||.||++|||++||++|.|.+. +++++|.|
T Consensus 81 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 81 EARNIIGSFDPE-----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 578999999874 35799999999999876 79999999999999999999985 48999999
Q ss_pred EEeCCCCCCC-------------cchHHHHhcCCC-cCCceEEEEeecCcCCCCccccccCC-C---HHHHHHHHHHccC
Q 005157 228 LFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-N---LWAVENFAAVAKY 289 (711)
Q Consensus 228 lf~~~EE~gl-------------~GS~~f~~~h~~-~~~v~a~inLD~~G~gG~~~lfqtg~-~---~~l~~~~~~~a~~ 289 (711)
+|+++||.|+ .||++|+++++. ..++.++||+|++|..+...... +. . +.+++.+.+.++.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~~ 232 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAARD 232 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec-ccccchHHHHHHHHHHHHHH
Confidence 9999999999 999999964443 36899999999999987653221 11 1 2345555443211
Q ss_pred CCCccccccccc---CCCCCCCCchHHHhhcCCceEEEEeee------CCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 005157 290 PSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYT------DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (711)
Q Consensus 290 p~~~~l~~~~f~---~g~ips~TD~~~F~~~~GIPgld~a~~------~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll 360 (711)
.+. ...|+ .|. ..+||.+|.++.|||+++++.. ...++|||+.||+|+||+++|++.++++++++
T Consensus 233 -~g~---~~~f~~~~~g~--~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~v 306 (309)
T 3tc8_A 233 -LGY---GKYFINAAGGA--ITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVI 306 (309)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred -cCC---cceeccCCCCC--CCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHH
Confidence 111 11122 132 2689999998679999999865 34578999999999999999999999999998
Q ss_pred HH
Q 005157 361 LQ 362 (711)
Q Consensus 361 ~~ 362 (711)
.+
T Consensus 307 y~ 308 (309)
T 3tc8_A 307 YN 308 (309)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 4
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=2.9e-35 Score=314.55 Aligned_cols=249 Identities=19% Similarity=0.295 Sum_probs=179.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005157 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (711)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~ 161 (711)
++|+++|++++|++|+++++|..||+++.++++||.++++++| +++++|.+.... +. ..+.+
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~---------~~---g~~~~ 83 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFG------AKVYNQYADLIA---------YD---GTILK 83 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TT---SCEEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEeeccc---------cC---CCccc
Confidence 5799999999999999999999999999999999999999998 466666654320 00 11235
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCcccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEE
Q 005157 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (711)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s-------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~fl 228 (711)
..|||++++|+ +++.|+++||||||+.+ +||.||++|||+|||++|.|.+. +++++|.|+
T Consensus 84 ~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv 156 (314)
T 3gux_A 84 SRNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIV 156 (314)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEE
T ss_pred ceEEEEEECCC-----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEE
Confidence 78999999874 35789999999999865 79999999999999999999985 489999999
Q ss_pred EeCCCCCCC--------------cchHHHHhcCCC-cCCceEEEEeecCcCCCCccccccCCC----HHHHHHHHHHccC
Q 005157 229 FNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGPN----LWAVENFAAVAKY 289 (711)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~h~~-~~~v~a~inLD~~G~gG~~~lfqtg~~----~~l~~~~~~~a~~ 289 (711)
|+++||.|+ .||++|+++++. ..+++++||+|++|..+.. ++..+.. +++.+.+.+.++.
T Consensus 157 ~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~-~~~~g~~~~~~~~l~~~~~~~~~~ 235 (314)
T 3gux_A 157 FFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDAT-FYYEGYSARTARSEMKKIWKKAHE 235 (314)
T ss_dssp EECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCC-EEECTTHHHHCHHHHHHHHHHHHH
T ss_pred EECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCc-eeeeccccccHHHHHHHHHHHHHH
Confidence 999999999 999999964443 3689999999999998865 3444442 3556665543321
Q ss_pred CCCccccccccc---CCCCCCCCchHHHhhcCCceEEEEeeeCC-------CCCCCCCCCCcCCCCHHHHHHHHHHHHHH
Q 005157 290 PSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYTDK-------SAVYHTKNDRLDLLKPGSLQHLGENMLDF 359 (711)
Q Consensus 290 p~~~~l~~~~f~---~g~ips~TD~~~F~~~~GIPgld~a~~~~-------~~~YHT~~Dt~d~i~~~sLq~~g~~vl~l 359 (711)
.+. ...|+ .|. ..+||.+|.+.+|||+++++...+ .++|||+.||+|+||+++|++.+++++.+
T Consensus 236 -~g~---~~~f~~~~~~~--~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~ 309 (314)
T 3gux_A 236 -LGY---GKYFVKEDGGE--TVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDV 309 (314)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHH
T ss_pred -cCC---ccccccccCCC--CCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHH
Confidence 111 11121 122 369999999867999999986532 36899999999999999999999999999
Q ss_pred HHH
Q 005157 360 LLQ 362 (711)
Q Consensus 360 l~~ 362 (711)
+.+
T Consensus 310 ~y~ 312 (314)
T 3gux_A 310 IYN 312 (314)
T ss_dssp HHT
T ss_pred Hhh
Confidence 874
No 5
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=1.8e-35 Score=318.23 Aligned_cols=252 Identities=21% Similarity=0.242 Sum_probs=184.7
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005157 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~N 164 (711)
+.++..+.|+.| ++||.+||++++++++||.++|++++ ++++.|.|..... .. .+.+..|
T Consensus 36 ~~~~~~~~l~~i--l~pR~~Gs~~~~~~~~~i~~~l~~~g------~~v~~q~f~~~~~--------~~----~~~~~~N 95 (330)
T 4fai_A 36 DKLHLREAIDKI--LIPRVVGTTNHSIVREYIVQSLRDLD------WDVEVNSFHDHAP--------IK----GKLHFHN 95 (330)
T ss_dssp CHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET--------TT----EEEEEEE
T ss_pred HHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEeeeeeecC--------CC----CceeEEE
Confidence 445555555555 57999999999999999999999998 5778777664311 00 1236789
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCcccCC----CCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCCCCC
Q 005157 165 IVLRILPKYASEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEEGL 237 (711)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~----spGA~Dd~sGva~~LE~ar~L~~---~~~~~~~~I~flf~~~EE~gl 237 (711)
||++++|+ +++.|+++|||||++. .+||+||++|||+|||++|.|++ .+.+|+++|+|+|++|||.|+
T Consensus 96 ii~~~~~~-----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl 170 (330)
T 4fai_A 96 IIATLNPN-----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFE 170 (330)
T ss_dssp EEEESCTT-----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSS
T ss_pred EEEEECCC-----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccc
Confidence 99999875 4578999999999864 48999999999999999999976 346799999999999999995
Q ss_pred --------cchHHHHhcC---CCcCCceEEEEeecCcCCCCccccccCCCHHHHHHHH----HHc------cCC---CCc
Q 005157 238 --------NGAHSFVTQH---PWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFA----AVA------KYP---SGQ 293 (711)
Q Consensus 238 --------~GS~~f~~~h---~~~~~v~a~inLD~~G~gG~~~lfqtg~~~~l~~~~~----~~a------~~p---~~~ 293 (711)
.||++|+++. ...+++.++||+||+|.+++.......+..+....+. +.. ..+ ...
T Consensus 171 ~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T 4fai_A 171 EWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVAQ 250 (330)
T ss_dssp SCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC-----------
T ss_pred cccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhcccccc
Confidence 7999999753 2457899999999999988664322222222211111 100 000 000
Q ss_pred ccccccccCC---CCCCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005157 294 IIGQDLFASG---VFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (711)
Q Consensus 294 ~l~~~~f~~g---~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~ 362 (711)
......|+.. .....|||.+|.+ .|||++++...+.+++|||+.||+|+||+++++++++.+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 251 RDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp ----CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 0001111110 0123689999999 899999998777788999999999999999999999999888865
No 6
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=2.5e-34 Score=308.96 Aligned_cols=253 Identities=19% Similarity=0.212 Sum_probs=193.4
Q ss_pred CCCCHHHHHH-HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005157 82 RGFSELEAMK-HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (711)
Q Consensus 82 ~~fs~erA~~-~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~ 160 (711)
.+|+.+|+++ +|+.+ +++|..||++++++++||.+++++++. ..++++|.|..+.. + .+.
T Consensus 34 ~~~~~~~~~~~~L~~~--~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~~--------~-----g~~ 94 (330)
T 3pb6_X 34 GQLDPQRLWSTYLRPL--LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTASTP--------L-----GPV 94 (330)
T ss_dssp HTCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEET--------T-----EEE
T ss_pred ccCCHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhCC----CCeEEEEeeecccc--------c-----CCc
Confidence 5799999998 68888 689999999999999999999999852 25677776653210 0 123
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCcccCC------CCCCCCChhHHHHHHHHHHHHHhc-----CCCCCCcEEEEE
Q 005157 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA------GEGAGDCSSCVAVMLELARVMSQW-----AHEFKNAVIFLF 229 (711)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~------spGA~Dd~sGva~~LE~ar~L~~~-----~~~~~~~I~flf 229 (711)
+..|||++++|+ .++.|+++|||||++. .+||+||++|||++||++|.|.+. +.+++++|.|+|
T Consensus 95 ~~~Nvia~~~g~-----~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~ 169 (330)
T 3pb6_X 95 DFGNVVATLDPR-----AARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLF 169 (330)
T ss_dssp EEEEEEEESCTT-----SSEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEE
Confidence 679999999875 3478999999999863 389999999999999999999873 357999999999
Q ss_pred eCCCCC--------CCcchHHHHhcC-----C----CcCCceEEEEeecCcCCCCccccccCCCHHHHHHHHH---Hc--
Q 005157 230 NTGEEE--------GLNGAHSFVTQH-----P----WSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAA---VA-- 287 (711)
Q Consensus 230 ~~~EE~--------gl~GS~~f~~~h-----~----~~~~v~a~inLD~~G~gG~~~lfqtg~~~~l~~~~~~---~a-- 287 (711)
+++||. |+.||++|+++. + ..++++++||+||+|..++..........++.+.+.+ ..
T Consensus 170 ~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~l~~i~~~~~~ 249 (330)
T 3pb6_X 170 LDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHR 249 (330)
T ss_dssp ESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCGGGHHHHHHHHHHHHHHHH
T ss_pred EcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeecCcchHHHHHHHHHHHHHHH
Confidence 999999 999999999642 1 3578999999999999876542111112222222211 11
Q ss_pred -----cCCCCcccccccccC--CCCCCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 005157 288 -----KYPSGQIIGQDLFAS--GVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (711)
Q Consensus 288 -----~~p~~~~l~~~~f~~--g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll 360 (711)
.+|... ..|+. ..-...|||.+|.+ .|||++++......++|||+.||+|+||++++++.++.+..++
T Consensus 250 ~g~~~~~p~~~----~~f~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv 324 (330)
T 3pb6_X 250 LNLLQSHPQEV----MYFQPGEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFL 324 (330)
T ss_dssp TTCCSSCCSSC----SSBCSSCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHH
T ss_pred cCccccCCccc----ccccccccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHH
Confidence 122111 12210 01125799999999 9999999987666678999999999999999999999999988
Q ss_pred HHH
Q 005157 361 LQT 363 (711)
Q Consensus 361 ~~L 363 (711)
.+.
T Consensus 325 ~Ey 327 (330)
T 3pb6_X 325 AEY 327 (330)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 7
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=100.00 E-value=1e-32 Score=296.57 Aligned_cols=268 Identities=20% Similarity=0.258 Sum_probs=198.4
Q ss_pred cccCCCCCcccccC--CCCCCHHHH-HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHh--hccccCCcceEEEEeeecc
Q 005157 67 YEHMPPPLTAEQAG--RRGFSELEA-MKHVKALTQLGPHAVGSDALDRALQYVLAASQK--IKESKHWEADVEVDFFHAK 141 (711)
Q Consensus 67 ~~~lP~~~~~~~~~--~~~fs~erA-~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~--ig~~~~~~~~vevd~f~~~ 141 (711)
.+++|.+++.++.+ +.+++.+|+ .++|++| +++|..+|++++++++||.+++++ .| +++++|.+...
T Consensus 9 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~ 80 (329)
T 2afw_A 9 NYHQPAILNSSALRQIAEGTSISEMWQNDLQPL--LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQ 80 (329)
T ss_dssp HHCCCCCCCHHHHHHHHHHCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEEC
T ss_pred cccCCCCCChHHHHHhhhhcCHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHhhCCC------CEEEEEEEEec
Confidence 45578777654433 356999999 8999999 578999999999999999999999 55 46777766542
Q ss_pred CCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEeecCcccCCC-------CCCCCChhHHHHHHHHHHHH
Q 005157 142 SGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------EGAGDCSSCVAVMLELARVM 214 (711)
Q Consensus 142 ~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s-------pGA~Dd~sGva~~LE~ar~L 214 (711)
.. ..+.+..|||++++|+ +++.|+++||||||+.+ +||.||++|||++||++|.|
T Consensus 81 ~~-------------~g~~~~~Nvi~~~~g~-----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l 142 (329)
T 2afw_A 81 TP-------------YGYRSFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARAL 142 (329)
T ss_dssp CT-------------TSSEEEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHT
T ss_pred CC-------------CCCceEeEEEEEECCC-----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHH
Confidence 10 0123579999999874 46889999999999865 89999999999999999999
Q ss_pred Hhc--------CCCCCCcEEEEEeCCCCC--------CCcchHHHHhcCC------------CcCCceEEEEeecCcCCC
Q 005157 215 SQW--------AHEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP------------WSTTIRVAVDLEAMGIGG 266 (711)
Q Consensus 215 ~~~--------~~~~~~~I~flf~~~EE~--------gl~GS~~f~~~h~------------~~~~v~a~inLD~~G~gG 266 (711)
.+. +.+++++|+|+|+++||. |+.||++|++++. ..+++.++||+|++|.++
T Consensus 143 ~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~ 222 (329)
T 2afw_A 143 DKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPN 222 (329)
T ss_dssp HHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSS
T ss_pred HHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCC
Confidence 875 347899999999999998 8999999997641 145799999999999877
Q ss_pred Cccc--cccCCCHHHHH---HHHHHc---cCCCCcccccccccCCCC--CCCCchHHHhhcCCceEEEEeeeCCCCCCCC
Q 005157 267 RSAL--FQAGPNLWAVE---NFAAVA---KYPSGQIIGQDLFASGVF--ETATDFQVYTEVAGLSGLDFAYTDKSAVYHT 336 (711)
Q Consensus 267 ~~~l--fqtg~~~~l~~---~~~~~a---~~p~~~~l~~~~f~~g~i--ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT 336 (711)
+... +.. ..+ +.+ ...+.. ............|..... ...|||.+|.+ .|||++++......++|||
T Consensus 223 ~~~~~~~~~-~~~-~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt 299 (329)
T 2afw_A 223 PTFPNFFPN-SAR-WFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHT 299 (329)
T ss_dssp CCBCCCCGG-GHH-HHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTS
T ss_pred CceeeeccC-cch-HHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCCC
Confidence 6432 221 112 221 111211 100000111112321111 24699999999 7999999988777789999
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 005157 337 KNDRLDLLKPGSLQHLGENMLDFLLQT 363 (711)
Q Consensus 337 ~~Dt~d~i~~~sLq~~g~~vl~ll~~L 363 (711)
++||++++|+++++++++.+..++.+.
T Consensus 300 ~~Dt~~~ld~~~l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 300 MDDNEENLDESTIDNLNKILQVFVLEY 326 (329)
T ss_dssp TTCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888887764
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=100.00 E-value=2.7e-32 Score=287.31 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=197.7
Q ss_pred CCCCHHHHHHHHHHHHhc-----CCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcc
Q 005157 82 RGFSELEAMKHVKALTQL-----GPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (711)
Q Consensus 82 ~~fs~erA~~~L~~L~~i-----gpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~ 156 (711)
.+++.++++++|++|+++ ++|..|++++.++++||.+++++++ .+++.+.+...
T Consensus 2 ~~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g------~~v~~~~~~~~--------------- 60 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSG--------------- 60 (284)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEET---------------
T ss_pred CcCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcC------CeEEEEEeccC---------------
Confidence 367899999999999875 3577888888999999999999998 35555543211
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC
Q 005157 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG 236 (711)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~g 236 (711)
..+..||+++++|+ .+++.|+++||+|+|+.++||.||++|+|++||++|.|++.+.+++++|+|+|+++||.|
T Consensus 61 --~~~~~nvi~~~~g~----~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g 134 (284)
T 1tkj_A 61 --GATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELG 134 (284)
T ss_dssp --TEEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGT
T ss_pred --CCCceeEEEEEeCC----CCCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC
Confidence 01357999999874 245789999999999999999999999999999999999877789999999999999999
Q ss_pred CcchHHHHhcCCC--cCCceEEEEeecCcCCCCccccccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHH
Q 005157 237 LNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVY 314 (711)
Q Consensus 237 l~GS~~f~~~h~~--~~~v~a~inLD~~G~gG~~~lfqtg~~~~l~~~~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F 314 (711)
+.||+.++++++. .+++.++||+|+.|.++....+. +.++.+.+.+.+.+++ .+.. .+... .-..+|||.+|
T Consensus 135 ~~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~~~~~~-~gi~--~~~~~--~~~~~sD~~~f 208 (284)
T 1tkj_A 135 LIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAG-LNVP--TEIET--EGDGRSDHAPF 208 (284)
T ss_dssp SHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHH-HTCC--CEECC--SSTTCSTHHHH
T ss_pred CcCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cCCHHHHHHHHHHHHH-cCCC--cccCC--CCCCCCchHHH
Confidence 9999999988764 36899999999999876443333 3456555554443211 1110 01111 11357999999
Q ss_pred hhcCCceEEEEeeeC-------------------CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 005157 315 TEVAGLSGLDFAYTD-------------------KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIP 370 (711)
Q Consensus 315 ~~~~GIPgld~a~~~-------------------~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~~~l~ 370 (711)
.+ .|||++.+.... ..++|||+.||++++|++.+++.++.+..+++.|++++.+|
T Consensus 209 ~~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 209 KN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp HH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HH-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 98 999999997541 14679999999999999999999999999999999998776
No 9
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.97 E-value=1.6e-30 Score=275.58 Aligned_cols=260 Identities=18% Similarity=0.236 Sum_probs=196.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005157 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (711)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~ 161 (711)
.+++.++++++|++|+++++|..+|+++.++++||.+++++++.... .++++.+... ..+
T Consensus 15 ~~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~---~~~~~~~~~~-----------------~~~ 74 (299)
T 1rtq_A 15 PQVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLP---NASVKQVSHS-----------------GYN 74 (299)
T ss_dssp GGCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTST---TEEEEEEEET-----------------TEE
T ss_pred HhcCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcc---cceeeeeccC-----------------CCC
Confidence 57899999999999999988988999988999999999999873211 2444433211 014
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCcccCC--------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005157 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA--------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (711)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~E 233 (711)
..||+++++|++ .+++.|+++||+|||+. ++||.||++|||++||++|.|++.+.+++++|+|+|+++|
T Consensus 75 ~~nvi~~~~g~~---~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~E 151 (299)
T 1rtq_A 75 QKSVVMTITGSE---APDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAE 151 (299)
T ss_dssp EEEEEEEECCSS---EEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCG
T ss_pred CceEEEEEECCC---CCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCc
Confidence 589999998751 24578999999999973 7999999999999999999999877789999999999999
Q ss_pred CCCCcchHHHHhcCCC-cCCceEEEEeecCcCCCCc--cccccC-CCHHHHHHHHHHcc--CCCCcccccccccCCCCCC
Q 005157 234 EEGLNGAHSFVTQHPW-STTIRVAVDLEAMGIGGRS--ALFQAG-PNLWAVENFAAVAK--YPSGQIIGQDLFASGVFET 307 (711)
Q Consensus 234 E~gl~GS~~f~~~h~~-~~~v~a~inLD~~G~gG~~--~lfqtg-~~~~l~~~~~~~a~--~p~~~~l~~~~f~~g~ips 307 (711)
|.|+.||+.++++++. .+++.++||+|+.|..|.. ..+... .++.+.+...+.++ .| + +... +.. ....
T Consensus 152 E~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~~~~-~--i~~~-~~~-~~~~ 226 (299)
T 1rtq_A 152 EVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDEYLP-S--LTYG-FDT-CGYA 226 (299)
T ss_dssp GGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHHHCT-T--CCEE-EEC-CSSC
T ss_pred cCCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHHhCc-c--CCcc-cCC-CCCC
Confidence 9999999999977653 4678899999999875432 233322 24544433332211 11 1 1111 111 1125
Q ss_pred CCchHHHhhcCCceEEEEee---eCCCCCCCCCCCCcCCCCH--HHHHHHHHHHHHHHHHHhcCCCCC
Q 005157 308 ATDFQVYTEVAGLSGLDFAY---TDKSAVYHTKNDRLDLLKP--GSLQHLGENMLDFLLQTASSTSIP 370 (711)
Q Consensus 308 ~TD~~~F~~~~GIPgld~a~---~~~~~~YHT~~Dt~d~i~~--~sLq~~g~~vl~ll~~La~~~~l~ 370 (711)
.|||.+|.+ .|||++.+.. .+..++|||+.||++++|+ ..++++++.+..++.+|++++.+.
T Consensus 227 ~sD~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~ 293 (299)
T 1rtq_A 227 CSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDT 293 (299)
T ss_dssp CSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred CCcHHHHHH-CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 799999998 9999987642 2345689999999999998 688999999999999999988753
No 10
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.97 E-value=3.8e-30 Score=297.43 Aligned_cols=209 Identities=17% Similarity=0.183 Sum_probs=175.7
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhc----CCCCCCcEEEEEeCCCCC
Q 005157 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLFNTGEEE 235 (711)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~----~~~~~~~I~flf~~~EE~ 235 (711)
.+..|||++++|+ +.+++.|+++||+||| ++||.||++|+|++||++|.|.+. +.+|+|+|+|++|++||.
T Consensus 264 ~~~~NVi~~i~G~---~~~~~~vvvgaH~Ds~--~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~ 338 (640)
T 3kas_A 264 IKILNIFGVIKGF---VEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDF 338 (640)
T ss_dssp EEEEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGG
T ss_pred eeEEEEEEEEeCC---cCCCCceeeecccCCC--CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCccc
Confidence 3678999999986 2457899999999999 489999999999999999999864 678999999999999999
Q ss_pred CCcchHHHHhcCC-C-cCCceEEEEeecCcCCCCccccccCC-CHHHHHHHHHHccCCCC-cccccc-ccc--CCCCCCC
Q 005157 236 GLNGAHSFVTQHP-W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSG-QIIGQD-LFA--SGVFETA 308 (711)
Q Consensus 236 gl~GS~~f~~~h~-~-~~~v~a~inLD~~G~gG~~~lfqtg~-~~~l~~~~~~~a~~p~~-~~l~~~-~f~--~g~ips~ 308 (711)
|+.||+.|+++|. + .+++.++||+|++|.|++...++++| ..++++.+.+.+++|.+ .++.++ .+. .+.++++
T Consensus 339 gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~ 418 (640)
T 3kas_A 339 GSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLD 418 (640)
T ss_dssp TSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTT
T ss_pred CchhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCC
Confidence 9999999998884 3 47899999999999887666677555 35677777777788875 344432 332 4678999
Q ss_pred CchHHHhhcCCceEEEEeeeCC-CC-CCCCCCCCcCCCCH------HHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 005157 309 TDFQVYTEVAGLSGLDFAYTDK-SA-VYHTKNDRLDLLKP------GSLQHLGENMLDFLLQTASSTSIPKGN 373 (711)
Q Consensus 309 TD~~~F~~~~GIPgld~a~~~~-~~-~YHT~~Dt~d~i~~------~sLq~~g~~vl~ll~~La~~~~l~~~~ 373 (711)
|||.+|.++.|||+++++|..+ .| +|||.+||+++++. ..++.+++.+..++.+|++++.+|.+.
T Consensus 419 sD~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~ 491 (640)
T 3kas_A 419 NAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDY 491 (640)
T ss_dssp STHHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCT
T ss_pred cchHHHHHhCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 9999999889999999999865 34 59999999998764 567888999999999999999999764
No 11
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.95 E-value=4.2e-29 Score=291.33 Aligned_cols=209 Identities=19% Similarity=0.236 Sum_probs=174.0
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCCC
Q 005157 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEE 235 (711)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~---~~~~~~~~I~flf~~~EE~ 235 (711)
..+..|||++++|+ +++++.|+++||+|||+ +||.||++|+|++||++|.|.+ .+.+|+|+|+|++|++||.
T Consensus 309 ~~~~~NVi~~i~G~---~~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~ 383 (707)
T 3fed_A 309 ITRIYNVVGTIRGS---VEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEF 383 (707)
T ss_dssp EEEEEEEEEEECCS---SEEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG
T ss_pred EEEEEEEEEEEeCC---CCCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccc
Confidence 34689999999986 24678999999999998 6999999999999999999986 4678999999999999999
Q ss_pred CCcchHHHHhcCC--CcCCceEEEEeecCcCCCCccccccCC-CHHHHHHHHHHccCCCC----ccccccccc-------
Q 005157 236 GLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSG----QIIGQDLFA------- 301 (711)
Q Consensus 236 gl~GS~~f~~~h~--~~~~v~a~inLD~~G~gG~~~lfqtg~-~~~l~~~~~~~a~~p~~----~~l~~~~f~------- 301 (711)
|+.||+.|+++|+ +.+++.++||+|+.|.|+....++++| ..++++.+.+.+++|.+ .++.+..++
T Consensus 384 Gl~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~ 463 (707)
T 3fed_A 384 GLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPEN 463 (707)
T ss_dssp TSHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTE
T ss_pred cchhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccc
Confidence 9999999998885 457899999999999887666677655 36677777777789975 344433332
Q ss_pred -----CCCCCCCCchHHHhhcCCceEEEEeeeCC-------CC-CCCCCCCCcCCCCH------HHHHHHHHHHHHHHHH
Q 005157 302 -----SGVFETATDFQVYTEVAGLSGLDFAYTDK-------SA-VYHTKNDRLDLLKP------GSLQHLGENMLDFLLQ 362 (711)
Q Consensus 302 -----~g~ips~TD~~~F~~~~GIPgld~a~~~~-------~~-~YHT~~Dt~d~i~~------~sLq~~g~~vl~ll~~ 362 (711)
.+.+.++|||.+|.++.|||+++++|..+ .| +|||.+||+++++. ...+.+++....++.+
T Consensus 464 ~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~ 543 (707)
T 3fed_A 464 KNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYE 543 (707)
T ss_dssp EEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 12345899999999989999999999844 33 79999999987644 5667789999999999
Q ss_pred HhcCCCCCCC
Q 005157 363 TASSTSIPKG 372 (711)
Q Consensus 363 La~~~~l~~~ 372 (711)
|++++.+|.+
T Consensus 544 La~~~vlP~~ 553 (707)
T 3fed_A 544 LVDSKIIPFN 553 (707)
T ss_dssp HHHCSSCCCC
T ss_pred HhCCccCCCC
Confidence 9999999864
No 12
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.95 E-value=1.5e-27 Score=266.45 Aligned_cols=199 Identities=18% Similarity=0.201 Sum_probs=159.3
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcch
Q 005157 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (711)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS 240 (711)
+..||+++++|+ +++++.|+++||+|||+.+|||.||++|++++||++|.|++.+.+|+++|+|+|+++||.|+.||
T Consensus 234 ~~~Nvi~~~~g~---~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs 310 (444)
T 3iib_A 234 TSYNVIAEVKGS---TKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGG 310 (444)
T ss_dssp EEEEEEEEECCS---TEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHH
T ss_pred eeEEEEEEEeCC---CCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCH
Confidence 678999999986 23568999999999999999999999999999999999998877899999999999999999999
Q ss_pred HHHHhcCCC-cCCceEEEEeecCcCCCCccccccCC-CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhcC
Q 005157 241 HSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVA 318 (711)
Q Consensus 241 ~~f~~~h~~-~~~v~a~inLD~~G~gG~~~lfqtg~-~~~l~~~~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~~~ 318 (711)
++|+++|+. .+++.+++|+|+.|.......++.++ ...+++.+.+.. ++.+... . .....++|||.+|.+ .
T Consensus 311 ~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~--~---~~~~~~~SD~~~f~~-~ 383 (444)
T 3iib_A 311 KTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA--G---NNKASGGPDVSMLPA-L 383 (444)
T ss_dssp HHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE--C---CSCCCCCGGGTTSGG-G
T ss_pred HHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc--c---cCCCCCCCccHHHHH-C
Confidence 999988854 36789999999865432222233222 245666665542 2333211 0 112456899999998 8
Q ss_pred CceEEEEeeeCC--CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 005157 319 GLSGLDFAYTDK--SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSI 369 (711)
Q Consensus 319 GIPgld~a~~~~--~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~~~l 369 (711)
|||++++..... .++|||++||+|++|++.|++.++.+..++..+|+.++.
T Consensus 384 GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 384 GVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp TCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999976432 358999999999999999999999999999999998764
No 13
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.94 E-value=3.8e-26 Score=253.19 Aligned_cols=198 Identities=23% Similarity=0.265 Sum_probs=154.9
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchH
Q 005157 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAH 241 (711)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~ 241 (711)
..||+++++|+.....+++.|+++||+|||+.+|||.||++|+|++||++|.|.+ .+++++|+|+++++||.|+.||+
T Consensus 203 ~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~--~~~~~~i~~~~~~~EE~g~~Gs~ 280 (421)
T 2ek8_A 203 SHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSK--LKTDTELRFITFGAEENGLIGSK 280 (421)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEESSSTTTSHHHH
T ss_pred ccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhc--cCCCceEEEEEECCccccchhHH
Confidence 5799999998521012678999999999999999999999999999999999987 36789999999999999999999
Q ss_pred HHHhcCC--CcCCceEEEEeecCcCCCCccc-cccCC-CHHHHHHH----HHHccCCCCcccccccccCCCCCCCCchHH
Q 005157 242 SFVTQHP--WSTTIRVAVDLEAMGIGGRSAL-FQAGP-NLWAVENF----AAVAKYPSGQIIGQDLFASGVFETATDFQV 313 (711)
Q Consensus 242 ~f~~~h~--~~~~v~a~inLD~~G~gG~~~l-fqtg~-~~~l~~~~----~~~a~~p~~~~l~~~~f~~g~ips~TD~~~ 313 (711)
.|+++++ +.+++.++||+|++|.++...+ ...+. .+.+...+ .+....| . .. ...+.|||.+
T Consensus 281 ~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~-----~~~~~SD~~~ 350 (421)
T 2ek8_A 281 KYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L---PY-----GQEGRSDHES 350 (421)
T ss_dssp HHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C---CE-----EECCSSTHHH
T ss_pred HHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C---CC-----CCCCCCccHH
Confidence 9998765 3467999999999998765222 22221 11122221 1111222 0 00 1235799999
Q ss_pred HhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 005157 314 YTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKG 372 (711)
Q Consensus 314 F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~~~l~~~ 372 (711)
|.+ .|||++.+......++|||++||+|+++++.++++++.+..++..|++.+.+|.+
T Consensus 351 F~~-~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~ 408 (421)
T 2ek8_A 351 FHA-LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIE 408 (421)
T ss_dssp HHT-TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred HHH-CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 998 9999998775555568999999999999999999999999999999999988754
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.85 E-value=2.7e-20 Score=202.12 Aligned_cols=178 Identities=19% Similarity=0.212 Sum_probs=135.2
Q ss_pred EcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCC
Q 005157 169 ILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (711)
Q Consensus 169 i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~ 248 (711)
++|+ +++.|+++||+||.. +|+||+||+|+++|++|.|++ .+++++++|+|++ |..||..|+++|+
T Consensus 174 ipG~-----t~~~IllsaH~cHP~---~ANDNaSG~a~lleLar~l~~--~~~~~t~rFvf~p----g~iGS~~yl~~~~ 239 (435)
T 3k9t_A 174 IRGE-----LEEEILLTTYTCHPS---MCNDNLSGVALITFIAKALSK--LKTKYSYRFLFAP----ETIGSITWLSRNE 239 (435)
T ss_dssp ECCS-----SSCEEEEEEECCCCS---CTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEEC----TTHHHHHHHHHCG
T ss_pred ecCC-----CCCEEEEEEEcCCCC---CCCccchHHHHHHHHHHHHhc--CCCCceEEEEEcC----ccHHHHHHHHhCh
Confidence 4774 458999999999843 699999999999999999986 4689999999998 6899999998886
Q ss_pred C-cCCceEEEEeecCcCCCCccccccCC-CHHHHHH-HHHHccCCCCcccccccccCCCCCCCCchHHHhhcCC--ceEE
Q 005157 249 W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVEN-FAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAG--LSGL 323 (711)
Q Consensus 249 ~-~~~v~a~inLD~~G~gG~~~lfqtg~-~~~l~~~-~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~~~G--IPgl 323 (711)
. .+++++.+|+||+|.++... +..++ .+++.+. .+++.++........+ | .|.++||++|.+ .| ||..
T Consensus 240 ~~l~~i~a~lnLDmVGd~~~~~-y~~sr~g~~~~d~~~~~vl~~~~~~~~~~~-f----~~~GSDh~qF~s-pG~dIPv~ 312 (435)
T 3k9t_A 240 DKLKNIKMGLVATCVGDAGIKN-YKRTKFGDAEIDKIVEKVLMHCGSEYYVAD-F----FPWGSDERQFSS-PGINLSVG 312 (435)
T ss_dssp GGGGGEEEEEECCSCCSSSCEE-EECCTTSSSHHHHHHHHHHHHSSSCEEEEC-C----CSCSSTHHHHTS-TTTCCCEE
T ss_pred HhhhceEEEEEEEEecCCCCce-eecCCCCChHHHHHHHHHHhhcCCCCceec-C----CCCCCcchhHhh-CCCCCCEE
Confidence 3 46899999999999987544 33222 2333332 2222222111001111 2 245699999999 88 9999
Q ss_pred EEeeeCC-CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005157 324 DFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (711)
Q Consensus 324 d~a~~~~-~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~~ 367 (711)
.+.-... .+.|||+.||+++|+++.|+...+.+...+..|-+..
T Consensus 313 ~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 313 SLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp EEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 9876433 3579999999999999999999999999999987754
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.75 E-value=2.6e-17 Score=171.52 Aligned_cols=232 Identities=17% Similarity=0.148 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005157 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (711)
+++.+.+++|.++ |. .|.++..+.+||.++|+++| ++++.+. . .+..|++
T Consensus 6 ~~~~~~l~~lv~i-ps--~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-------------------~~~~nv~ 55 (269)
T 4h2k_A 6 EKVVSLAQDLIRR-PS--ISPNDEGCQQIIAERLEKLG------FQIEWMP--F-------------------NDTLNLW 55 (269)
T ss_dssp HHHHHHHHHHHTS-CC--BTTCCTTHHHHHHHHHHTTT------CEEEECC--B-------------------TTBCEEE
T ss_pred HHHHHHHHHHhCC-CC--CCCCcHHHHHHHHHHHHHcC------CeEEEEE--c-------------------CCceEEE
Confidence 5678888999886 32 34444568999999999998 3444321 0 1357999
Q ss_pred EEEcCCCCCCCCCCeEEEeecCcccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005157 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (711)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~s---------------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I 225 (711)
+++ |+ +.+.|++.+|+|+||.+ +|+.||++|+++++++++.|.+.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i 129 (269)
T 4h2k_A 56 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 129 (269)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccE
Confidence 988 43 35689999999999853 6999999999999999999998776788999
Q ss_pred EEEEeCCCCCCCc-chHHHHhcCC-CcCCceEEEEeecCcCC--CCcc-ccccC-----CCHHHHHHHHHHccCCCCccc
Q 005157 226 IFLFNTGEEEGLN-GAHSFVTQHP-WSTTIRVAVDLEAMGIG--GRSA-LFQAG-----PNLWAVENFAAVAKYPSGQII 295 (711)
Q Consensus 226 ~flf~~~EE~gl~-GS~~f~~~h~-~~~~v~a~inLD~~G~g--G~~~-lfqtg-----~~~~l~~~~~~~a~~p~~~~l 295 (711)
+|+|+.+||.|.. ||+.++++.. ...+..++|+.|..+.. +... .-+.| .+..+++...++++.-.+..
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~~~gi~- 208 (269)
T 4h2k_A 130 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEETIGIT- 208 (269)
T ss_dssp EEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHHHHSCC-
T ss_pred EEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHHHhCCC-
Confidence 9999999999984 9999986432 12467899999976432 1111 00111 12345555554332101110
Q ss_pred ccccccCCCCCCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005157 296 GQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (711)
Q Consensus 296 ~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~ 365 (711)
.... ..+..||.+.+.. .|+|.+.+.-.. .++||+. |.++.+.+++..+.+..+++.|.+
T Consensus 209 -~~~~---~~gggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~---E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 209 -PKAE---TGGGTSDGRFIAL-MGAEVVEFGPLN--STIHKVN---ECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp -CEEE---CC--CHHHHHHHT-TTCEEEECCSBC--TTTTSTT---CEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred -CEEe---cCCCCchHHHHHh-hCCCEEEEEeCC--CCCcCCc---ccccHHHHHHHHHHHHHHHHHHhh
Confidence 0111 1235799999987 899998875433 4469987 578999999999999999988764
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.74 E-value=1.5e-17 Score=173.20 Aligned_cols=231 Identities=16% Similarity=0.153 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005157 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (711)
+++.+.+++|.++ |.+ |.++.++.+||.++|+++|. +++.+. . .+..|++
T Consensus 6 ~~~~~~l~~lv~i-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~~--~-------------------~~~~nv~ 55 (268)
T 3t68_A 6 SPVLALAKELISR-QSV--TPADAGCQDLMIERLKALGF------EIESMV--F-------------------EDTTNFW 55 (268)
T ss_dssp CHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHHTTC------EECCCE--E-------------------TTEEC-C
T ss_pred HHHHHHHHHHhCC-CCC--CCCchHHHHHHHHHHHHCCC------eEEEEe--c-------------------CCccEEE
Confidence 6788899999986 333 33345689999999999983 332211 0 1346899
Q ss_pred EEEcCCCCCCCCCCeEEEeecCcccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005157 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (711)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~s---------------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I 225 (711)
+++ |+ ..+.|++.+|+|+||.+ +|+.||++|++++|++++.|++.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v 129 (268)
T 3t68_A 56 ARR-GT-----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSI 129 (268)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcE
Confidence 988 43 34689999999999853 6999999999999999999988777788999
Q ss_pred EEEEeCCCCCCC-cchHHHHhcCC-CcCCceEEEEeecCcCC--CCcc-------ccccCCCHHHHHHHHHHccCCCCcc
Q 005157 226 IFLFNTGEEEGL-NGAHSFVTQHP-WSTTIRVAVDLEAMGIG--GRSA-------LFQAGPNLWAVENFAAVAKYPSGQI 294 (711)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~h~-~~~~v~a~inLD~~G~g--G~~~-------lfqtg~~~~l~~~~~~~a~~p~~~~ 294 (711)
+|+|+.+||.|. .||+.++++.. ...+..++|++|..+.. |... -+.+ ++..+.+...++++.-.+..
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~-~~~~l~~~l~~a~~~~~gi~ 208 (268)
T 3t68_A 130 GFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLT-DTGELLAAVVAAVEEVNHQA 208 (268)
T ss_dssp EEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSC-CCCHHHHHHHHHHHHHHSSC
T ss_pred EEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccC-CchHHHHHHHHHHHHHhCCC
Confidence 999999999998 59999986432 23467899999976532 1111 0111 22335555555432111110
Q ss_pred cccccccCCCCCCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005157 295 IGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (711)
Q Consensus 295 l~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~ 365 (711)
. + .. ....+||+..|.+ .|+|++.+.. ....+||+. |.++.+.+++..+.+..+++.|.+
T Consensus 209 ~-~-~~---~sgggtD~~~~~~-~g~p~~~~~~--~~~~~Hs~~---E~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 209 P-A-LL---TTGGTSDGRFIAQ-MGAQVVELGP--VNATIHKVN---ECVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp C-E-EE---SSCCCHHHHHHHH-HTCEEEECCS--BCTTTTSTT---CEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred c-E-Ee---cCccccHHHHHHh-cCCCEEEEee--CCCCCCCcc---ccccHHHHHHHHHHHHHHHHHHhC
Confidence 0 1 11 1235799999997 8999887643 234569987 578899999999999999988764
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.67 E-value=7.5e-16 Score=153.41 Aligned_cols=134 Identities=19% Similarity=0.219 Sum_probs=107.7
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005157 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (711)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~ 162 (711)
.++.+++.+.|++|.++ |.+.++++++++++|+.+++++++ .+++.+.... +.
T Consensus 6 ~~~~~~~~~~l~~lv~i-~s~s~~~~e~~~~~~l~~~l~~~g------~~~~~~~~~~--------------------g~ 58 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRI-RTVQPKPDYGAAVAFFEETARQLG------LGCQKVEVAP--------------------GY 58 (198)
T ss_dssp -CCCCHHHHHHHHHHTS-CCBTTSCCHHHHHHHHHHHHHHHT------CEEEEEEEET--------------------TE
T ss_pred chhHHHHHHHHHHHhcC-CCCCCCcCHHHHHHHHHHHHHHCC------CeEEEEEcCC--------------------CC
Confidence 46778899999999997 444454456789999999999998 3444432110 23
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecCcccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 005157 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (711)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------spGA~Dd~sGva~~LE~ar~L~~~~~~~ 221 (711)
.|++++++|+ .++.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.++
T Consensus 59 ~~~i~~~~g~---~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~ 135 (198)
T 1q7l_A 59 VVTVLTWPGT---NPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRF 135 (198)
T ss_dssp EEEEEEECCS---STTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEEEccC---CCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCC
Confidence 6999999875 134578999999999874 3789999999999999999999887788
Q ss_pred CCcEEEEEeCCCCCC-CcchHHHHhc
Q 005157 222 KNAVIFLFNTGEEEG-LNGAHSFVTQ 246 (711)
Q Consensus 222 ~~~I~flf~~~EE~g-l~GS~~f~~~ 246 (711)
+++|.|+|+.+||.| +.|++.++++
T Consensus 136 ~~~v~~~~~~~EE~g~~~Ga~~~~~~ 161 (198)
T 1q7l_A 136 PRTIHMTFVPDEEVGGHQGMELFVQR 161 (198)
T ss_dssp SSCEEEEEESCGGGTSTTTHHHHTTS
T ss_pred CCCEEEEEEcccccCccccHHHHHHh
Confidence 999999999999997 7999999854
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.65 E-value=2e-15 Score=164.53 Aligned_cols=226 Identities=18% Similarity=0.197 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005157 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (711)
+++.+.|++|+++ |.+.|.+ +++++||.+++++++. ++++| +..|++
T Consensus 7 ~~~~~~l~~L~~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnli 53 (373)
T 1vhe_A 7 DETLTMLKDLTDA-KGIPGNE--REVRQVMKSYIEPFAD------EVTTD------------------------RLGSLI 53 (373)
T ss_dssp CHHHHHHHHHHHS-CCCTTCC--HHHHHHHHHHHGGGCS------EEEEC------------------------TTCCEE
T ss_pred HHHHHHHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEc------------------------CCCcEE
Confidence 4678899999997 4555543 5789999999999873 34432 236899
Q ss_pred EEEcCCCCCCCCCCeEEEeecCcccC------------------------------------------------------
Q 005157 167 LRILPKYASEAGENAILVSSHIDTVS------------------------------------------------------ 192 (711)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~------------------------------------------------------ 192 (711)
++++|+ ...+.|++.||+|+|+
T Consensus 54 a~~~g~----~~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~ 129 (373)
T 1vhe_A 54 AKKTGA----ENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPE 129 (373)
T ss_dssp EEEESS----TTSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTT
T ss_pred EEecCC----CCCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchh
Confidence 998764 2347899999999997
Q ss_pred ---------------------------CCCC---------------------CCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005157 193 ---------------------------AGEG---------------------AGDCSSCVAVMLELARVMSQWAHEFKNA 224 (711)
Q Consensus 193 ---------------------------~spG---------------------A~Dd~sGva~~LE~ar~L~~~~~~~~~~ 224 (711)
..+| +.||++|+|++|+++|.|.+. .++++
T Consensus 130 ~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~--~~~~~ 207 (373)
T 1vhe_A 130 ARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNT--DHPNI 207 (373)
T ss_dssp TTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTS--CCSSE
T ss_pred hccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhc--CCCce
Confidence 1123 799999999999999999875 36799
Q ss_pred EEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecCcCCC----------------Ccccc-c--cCCCHHHHHHHHH
Q 005157 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG----------------RSALF-Q--AGPNLWAVENFAA 285 (711)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~G~gG----------------~~~lf-q--tg~~~~l~~~~~~ 285 (711)
|+|+|+++||.|+.|++.+.... +...+|++|+.+.++ +..-+ . ...++.+.+...+
T Consensus 208 v~~~~~~~EE~G~~G~~~~~~~~----~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~ 283 (373)
T 1vhe_A 208 VYGVGTVQEEVGLRGAKTAAHTI----QPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVA 283 (373)
T ss_dssp EEEEEESCCTTTSHHHHHHHHHH----CCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHH
T ss_pred EEEEEECCcccChhhHHHHhccc----CCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHHH
Confidence 99999999999999999886422 246789999876432 10000 0 0125666666655
Q ss_pred HccCCCCcccccccccCCCCCCCCchHHH--hhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 005157 286 VAKYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQT 363 (711)
Q Consensus 286 ~a~~p~~~~l~~~~f~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~L 363 (711)
+++. .+.....+.. .+..||...| .. .|+|.+++.-. . ..+||+. |+++.+.+++..+.+..++..+
T Consensus 284 ~a~~-~gi~~~~~~~----~~ggtDa~~~~~~~-~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l 352 (373)
T 1vhe_A 284 TAEE-AGIPYQFDAI----AGGGTDSGAIHLTA-NGVPALSITIA-T-RYIHTHA---AMLHRDDYENAVKLITEVIKKL 352 (373)
T ss_dssp HHHH-HTCCCEEEEE----TTCCCTHHHHTTST-TCCCEEEEEEE-E-BSTTSSC---EEEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHH-cCCCeEEecC----CCCCccHHHHHHhC-CCCcEEEEccc-c-ccCCChh---heecHHHHHHHHHHHHHHHHHh
Confidence 4321 1111111111 2357999999 44 79999987533 2 3479974 7789999999999999999987
Q ss_pred hcC
Q 005157 364 ASS 366 (711)
Q Consensus 364 a~~ 366 (711)
++.
T Consensus 353 ~~~ 355 (373)
T 1vhe_A 353 DRK 355 (373)
T ss_dssp CHH
T ss_pred cHH
Confidence 653
No 19
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.64 E-value=2.5e-15 Score=162.43 Aligned_cols=220 Identities=17% Similarity=0.201 Sum_probs=156.9
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEE
Q 005157 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (711)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~ 168 (711)
..+.|++|+++ |.+.|.++ +++++||.+++++++. +++.| +..|++++
T Consensus 8 ~~~~l~~L~~~-~s~sg~e~-~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~ 55 (353)
T 1y0y_A 8 DYELLKKVVEA-PGVSGYEF-LGIRDVVIEEIKDYVD------EVKVD------------------------KLGNVIAH 55 (353)
T ss_dssp CHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHGGGSS------EEEEC------------------------TTCCEEEE
T ss_pred HHHHHHHHHhC-CCCCccch-HHHHHHHHHHHHhhCC------eEEEc------------------------CCCCEEEE
Confidence 46789999997 45555443 5789999999999873 34432 34699998
Q ss_pred EcCCCCCCCCCCeEEEeecCcccC--------------------------------------------------------
Q 005157 169 ILPKYASEAGENAILVSSHIDTVS-------------------------------------------------------- 192 (711)
Q Consensus 169 i~g~~~~~~~~~~Vll~aH~DSv~-------------------------------------------------------- 192 (711)
++|+ ++.++++||+|+|+
T Consensus 56 ~~g~------~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~ 129 (353)
T 1y0y_A 56 KKGE------GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPED 129 (353)
T ss_dssp ECCS------SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC----------
T ss_pred ecCC------CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhh
Confidence 8642 37899999999995
Q ss_pred --------------------------CCCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005157 193 --------------------------AGEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (711)
Q Consensus 193 --------------------------~spG--------------------A~Dd~sGva~~LE~ar~L~~~~~~~~~~I~ 226 (711)
..+| |.||++|++++|++++.|++ ++++|+
T Consensus 130 ~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~ 205 (353)
T 1y0y_A 130 RKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVY 205 (353)
T ss_dssp ---CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEE
T ss_pred ccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEE
Confidence 2345 69999999999999999864 678999
Q ss_pred EEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecCcCCCCcc---------------c-c---ccCCCHHHHHHHHHHc
Q 005157 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSA---------------L-F---QAGPNLWAVENFAAVA 287 (711)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~G~gG~~~---------------l-f---qtg~~~~l~~~~~~~a 287 (711)
|+|+++||.|+.|++.+... .+...++++|+.+.++... + + ....++.+.+...+++
T Consensus 206 ~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a 281 (353)
T 1y0y_A 206 FVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELA 281 (353)
T ss_dssp EEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHH
T ss_pred EEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHH
Confidence 99999999999999988742 2346889999876532110 0 0 1112566666666554
Q ss_pred cCCCCcccccccccCCCCCCCCchHHH--hhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005157 288 KYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (711)
Q Consensus 288 ~~p~~~~l~~~~f~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~ 365 (711)
+.. +.....+.. .+..||...| .. .|+|.+++.-. . ..+||+. |+++.+.+.+..+.+..++..+.+
T Consensus 282 ~~~-gi~~~~~~~----~~ggsDa~~~~~~~-~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 282 KKH-EIPYQLEIL----LGGGTDAGAIHLTK-AGVPTGALSVP-A-RYIHSNT---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp HHT-TCCEEEEEC----SSCCCTHHHHTTST-TCCCEEEEEEE-E-BSCSSSC---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred HHc-CCCEEEeec----CCCCchHHHHHHhC-CCCcEEEEccc-c-cccCCHH---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 321 211111111 3467999999 44 79999987533 2 3589975 778899999999999999998865
No 20
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.62 E-value=3.8e-15 Score=160.79 Aligned_cols=223 Identities=15% Similarity=0.234 Sum_probs=146.4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005157 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~N 164 (711)
+.+++.+.|++|.++ |.+.|. ++++++|+.+++++++ .+++.| +..|
T Consensus 4 ~~~~~~~~l~~lv~i-~s~s~~--e~~~~~~l~~~l~~~g------~~~~~d------------------------~~gn 50 (349)
T 2gre_A 4 HTKETMELIKELVSI-PSPSGN--TAKIINFIENYVSEWN------VETKRN------------------------NKGA 50 (349)
T ss_dssp HHHHHHHHHHHHHTS-CCBTTC--CHHHHHHHHHHTTTSS------SEEEEC------------------------SSSC
T ss_pred cHHHHHHHHHHHHhC-CCCCcc--HHHHHHHHHHHHHHhC------CEEEEe------------------------cCCc
Confidence 467899999999997 444443 3568999999999987 234432 2358
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCcccC----------------C-----------------------------------
Q 005157 165 IVLRILPKYASEAGENAILVSSHIDTVS----------------A----------------------------------- 193 (711)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~----------------~----------------------------------- 193 (711)
++++++|+ .+.+.|++.+|+|+|+ .
T Consensus 51 l~a~~~g~----~~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h 126 (349)
T 2gre_A 51 LILTVKGK----NDAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVH 126 (349)
T ss_dssp EEEEECCS----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-----
T ss_pred EEEEecCC----CCCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCcc
Confidence 99999764 1346899999999983 0
Q ss_pred ----------------------------------CC---------------C-----CCCChhHHHHHHHHHHHHHhcCC
Q 005157 194 ----------------------------------GE---------------G-----AGDCSSCVAVMLELARVMSQWAH 219 (711)
Q Consensus 194 ----------------------------------sp---------------G-----A~Dd~sGva~~LE~ar~L~~~~~ 219 (711)
.+ | +.||++|++++|++++.|.+.+.
T Consensus 127 ~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~ 206 (349)
T 2gre_A 127 VYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENV 206 (349)
T ss_dssp --------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTC
T ss_pred ccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccC
Confidence 00 1 69999999999999999998776
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecCcCCC-Cc-----c-c-c--ccC-CCHHHHHHHHHHcc
Q 005157 220 EFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-RS-----A-L-F--QAG-PNLWAVENFAAVAK 288 (711)
Q Consensus 220 ~~~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~G~gG-~~-----~-l-f--qtg-~~~~l~~~~~~~a~ 288 (711)
+++++|+|+|+++||.|+.|++.+ ..+...++++|+.+.++ +. . + + +.+ .++.+.+.+.++++
T Consensus 207 ~~~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~a~ 280 (349)
T 2gre_A 207 TLPYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAK 280 (349)
T ss_dssp CCSEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHH
T ss_pred CCCceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHHHH
Confidence 788999999999999999999865 23578999999987653 21 1 1 1 112 26677766655432
Q ss_pred CCCCcccccccccCCCCCCCCchHHHhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 005157 289 YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (711)
Q Consensus 289 ~p~~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~ 361 (711)
. .+.....+.. ...+||+.+|.. ..|+|.+++. ... .++|| .|.++.+.+.+..+.+..++.
T Consensus 281 ~-~gi~~q~~~~----~ggGsDa~~~~~~~~GiPt~~lg-~~~-~~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 281 T-NHIEYKVDIY----PYYGSDASAAIRAGFDVKHALIG-AGI-DSSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp H-HTCCEEEEEC----SCC--------CCSSSCEEEEEE-ECC-BSTTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred H-cCCCcEEecc----CCCCccHHHHHHhCCCCcEEEec-cCc-ccccc----ceeccHHHHHHHHHHHHHHHh
Confidence 1 1211111122 235789988842 3699999774 333 34786 688889999998888877765
No 21
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.61 E-value=5e-15 Score=158.46 Aligned_cols=147 Identities=18% Similarity=0.192 Sum_probs=104.7
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecCcCCC----------
Q 005157 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG---------- 266 (711)
Q Consensus 197 A~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~G~gG---------- 266 (711)
+.||++|++++|+++|.|++.+ ++++|.|+|+++||.|+.|++.++.. .+...++++|+.+..+
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~ 244 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGK 244 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTS
T ss_pred cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCC
Confidence 6999999999999999998753 67999999999999999999999732 2356899999876532
Q ss_pred -Ccccc---ccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcC
Q 005157 267 -RSALF---QAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLD 342 (711)
Q Consensus 267 -~~~lf---qtg~~~~l~~~~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d 342 (711)
...-+ ....++.+.+...++++. .+... +....+..||...|.. |+|.+++.-. ...+||+. |
T Consensus 245 G~~i~~~d~~~~~~~~l~~~l~~~~~~-~gi~~-----~~~~~~ggtDa~~~~~--GiPtv~lg~~--~~~~Hs~~---E 311 (332)
T 2wyr_A 245 GPVIRAVDNSAIYSRDLARKVWSIAEK-NGIEI-----QIGVTGGGTDASAFQD--RSKTLALSVP--IKYLHSEV---E 311 (332)
T ss_dssp CCEEEEECSSCBCCHHHHHHHHHHHHH-TTCCC-----EEEECSSCCGGGGGTT--TSEEEEEECE--EBSCSSTT---C
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHH-cCCCe-----EEecCCCCchHHHHHc--CCCEEEEcCC--cCCCCChh---h
Confidence 11100 111356677666654432 12111 1111346899999986 9999987532 23589964 7
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 005157 343 LLKPGSLQHLGENMLDFLLQ 362 (711)
Q Consensus 343 ~i~~~sLq~~g~~vl~ll~~ 362 (711)
+++.+.+++..+.+..++..
T Consensus 312 ~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 312 TLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp EEEHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHh
Confidence 78899999999988888765
No 22
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.53 E-value=2.9e-14 Score=153.26 Aligned_cols=219 Identities=17% Similarity=0.232 Sum_probs=137.6
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcC
Q 005157 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (711)
Q Consensus 92 ~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~g 171 (711)
.|++|+++ |.+.|.+ +++++|+.+++++++. +++.| +..|++++++|
T Consensus 3 ~l~~L~~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~~~g 49 (340)
T 2fvg_A 3 YLKELSMM-PGVSGDE--GKVRDFIKSKIEGLVD------NLYTD------------------------VLGNLIALKRG 49 (340)
T ss_dssp CHHHHHHS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEEEEECC
T ss_pred HHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEe------------------------CCCcEEEEecC
Confidence 47788886 4555543 4689999999999872 34432 23589999876
Q ss_pred CCCCCCCCCeEEEeecCcccC-----------------------------------------------------------
Q 005157 172 KYASEAGENAILVSSHIDTVS----------------------------------------------------------- 192 (711)
Q Consensus 172 ~~~~~~~~~~Vll~aH~DSv~----------------------------------------------------------- 192 (711)
+ .+.+.|++.+|+|+|+
T Consensus 50 ~----~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~ 125 (340)
T 2fvg_A 50 R----DSSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFEN 125 (340)
T ss_dssp S----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTT
T ss_pred C----CCCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCccc
Confidence 4 1346899999999998
Q ss_pred ----------------CCCC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC
Q 005157 193 ----------------AGEG-------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL 237 (711)
Q Consensus 193 ----------------~spG-------------------A~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl 237 (711)
..+| +.||++|++++|+++|.+. +++++|+|+|+++||.|+
T Consensus 126 l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~ 201 (340)
T 2fvg_A 126 LRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGL 201 (340)
T ss_dssp EEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC---
T ss_pred EEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccch
Confidence 1113 6899999999999999986 467899999999999999
Q ss_pred cchHHHHhcCCCcCCceEEEEeecCcCC---CCc-----------c-c--cccC--CCHHHHHHHHHHccCCCCcccccc
Q 005157 238 NGAHSFVTQHPWSTTIRVAVDLEAMGIG---GRS-----------A-L--FQAG--PNLWAVENFAAVAKYPSGQIIGQD 298 (711)
Q Consensus 238 ~GS~~f~~~h~~~~~v~a~inLD~~G~g---G~~-----------~-l--fqtg--~~~~l~~~~~~~a~~p~~~~l~~~ 298 (711)
.|++.++++ .+...+|++|+.+.+ |+. . + ...+ .++.+.+...+.++. .+.....+
T Consensus 202 ~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~-~gi~~~~~ 276 (340)
T 2fvg_A 202 RGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKN-NDIPFQMK 276 (340)
T ss_dssp --CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHH-TTCCCEEC
T ss_pred hhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCeEEE
Confidence 999999853 234578999876532 211 0 1 0011 245566555554321 11111111
Q ss_pred cccCCCCCCCCchHHHhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005157 299 LFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (711)
Q Consensus 299 ~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~ 365 (711)
. ..+..||...|.. ..|+|.+.+.-. .. .+||+. |+++.+.+++..+.+..++..+.+
T Consensus 277 ~----~~~ggtDa~~~~~~~~GiP~v~~g~~-~~-~~Hs~~---E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 277 R----RTAGGTDAGRYARTAYGVPAGVISTP-AR-YIHSPN---SIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp C----CC-------------CCSCEEEEEEE-EE-ESSTTC---EEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred e----cCCCCccHHHHHhhCCCCcEEEeccc-cc-ccCChh---hcccHHHHHHHHHHHHHHHHhccc
Confidence 1 1346799999875 269999977532 23 389986 568899999999999999998765
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.49 E-value=2.5e-13 Score=149.09 Aligned_cols=130 Identities=18% Similarity=0.171 Sum_probs=108.3
Q ss_pred CCHHHHHHHHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcc
Q 005157 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (711)
Q Consensus 84 fs~erA~~~L~~L~~igp-------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~ 156 (711)
.+.+|+++.|++|++++. |+..|.++.++++||.++|++++ ++++.|
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g------~~~~~d-------------------- 55 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAG------LFVYED-------------------- 55 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEC--------------------
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCC------CEEEEc--------------------
Confidence 467999999999999854 34458888899999999999998 344432
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-
Q 005157 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE- 235 (711)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~- 235 (711)
...|++++++|++ ++.+.|++.||+|+||. .|+.|++.|++++|++++.|.+.+.+++++|.|+|+.+||.
T Consensus 56 ----~~gnv~a~~~g~~---~~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~ 127 (408)
T 3n5f_A 56 ----AAGNLIGRKEGTN---PDATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGA 127 (408)
T ss_dssp ----TTCCEEEEECCSS---TTSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCT
T ss_pred ----CCCCEEEEecCCC---CCCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcccc
Confidence 2359999998752 34689999999999995 58899999999999999999988777899999999999996
Q ss_pred ----CCcchHHHHhcC
Q 005157 236 ----GLNGAHSFVTQH 247 (711)
Q Consensus 236 ----gl~GS~~f~~~h 247 (711)
|+.||+.++.+.
T Consensus 128 ~~~~g~~Gs~~~~~~~ 143 (408)
T 3n5f_A 128 RFRFGMIGSRAMAGTL 143 (408)
T ss_dssp TTTCCCHHHHHHHTCC
T ss_pred ccCCCCcCHHHHHcCC
Confidence 788999998533
No 24
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.49 E-value=5.4e-13 Score=149.28 Aligned_cols=156 Identities=13% Similarity=0.158 Sum_probs=115.9
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCH----HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005157 85 SELEAMKHVKALTQLGPHAVGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~----~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~ 160 (711)
..+++.+.+++|.++ |.+.+.+ ++.++.+||.+++++++ .+++.+..... ...+ +. ...
T Consensus 18 ~~~~~~~~l~~l~~~-ps~s~~e~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~----~~~~----~~--~~~ 80 (479)
T 2zog_A 18 NQDRYVKKLAEWVAI-QSVSAWPEKRGEIRRMMEVAAADVQRLG------GSVELVDIGKQ----KLPD----GS--EIP 80 (479)
T ss_dssp THHHHHHHHHHHHHS-CCBTTCGGGHHHHHHHHHHHHHHHHHTT------CEEEEECCCEE----ECTT----SC--EEE
T ss_pred hHHHHHHHHHHHhcC-CCccCCcccchHHHHHHHHHHHHHHHcC------CeEEEeecccc----ccCC----Cc--ccC
Confidence 357889999999997 4444443 34689999999999998 34544321000 0000 00 000
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCcccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCC
Q 005157 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAH 219 (711)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------spGA~Dd~sGva~~LE~ar~L~~~~~ 219 (711)
...||++++++. ++.+.|++.+|+|+||. ++|+.||+.|++++|++++.|.+.+.
T Consensus 81 ~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~ 156 (479)
T 2zog_A 81 LPPILLGKLGSD----PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ 156 (479)
T ss_dssp CCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEecCC----CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCC
Confidence 127999999653 34578999999999975 37889999999999999999998877
Q ss_pred CCCCcEEEEEeCCCCCCCcchHHHHhcCCC--cCCceEEEEeec
Q 005157 220 EFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEA 261 (711)
Q Consensus 220 ~~~~~I~flf~~~EE~gl~GS~~f~~~h~~--~~~v~a~inLD~ 261 (711)
+++++|.|+|+.+||.|..|++.+++++.. ..++.+++++|.
T Consensus 157 ~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 157 EIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp CCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred CCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 888999999999999999999999977642 235678888885
No 25
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.44 E-value=7e-13 Score=144.73 Aligned_cols=147 Identities=21% Similarity=0.307 Sum_probs=113.1
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHH-HHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005157 85 SELEAMKHVKALTQLGPHAVGSDA-LDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~-~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~ 163 (711)
..+++.+.|++|.++ |.+.+.++ ..++.+||.++++++| ++++.+..... ....
T Consensus 17 ~~~~~~~~l~~lv~i-~s~s~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~------------------~~~~ 71 (393)
T 1cg2_A 17 EQPAVIKTLEKLVNI-ETGTGDAEGIAAAGNFLEAELKNLG------FTVTRSKSAGL------------------VVGD 71 (393)
T ss_dssp HHHHHHHHHHHHHTS-CCBTTCHHHHHHHHHHHHHHHHHTT------CEEEEEECSTT------------------CCSE
T ss_pred hHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHcC------CeEEEEecCcC------------------CCCC
Confidence 357889999999998 44555543 4689999999999998 34444321000 0135
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecCcccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005157 164 HIVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (711)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-----------------spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~ 226 (711)
|++++++|+ ..+.|++.+|+|+||. ++|+.||+.|++++|++++.|++.+.+++++|.
T Consensus 72 ~v~a~~~g~-----~~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 146 (393)
T 1cg2_A 72 NIVGKIKGR-----GGKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTIT 146 (393)
T ss_dssp EEEEEEECS-----SCCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE
T ss_pred eEEEEECCC-----CCceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEE
Confidence 999999764 1378999999999975 379999999999999999999987767778999
Q ss_pred EEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecCc
Q 005157 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (711)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~G 263 (711)
|+|..+||.|..|++.+++++. .++.+++++|..+
T Consensus 147 ~~~~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 147 VLFNTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp EEEESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EEEEcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 9999999999999999986432 2456777777543
No 26
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.39 E-value=1.5e-12 Score=146.05 Aligned_cols=145 Identities=16% Similarity=0.225 Sum_probs=110.3
Q ss_pred HH-HHHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005157 86 EL-EAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (711)
Q Consensus 86 ~e-rA~~~L~~L~~igpr~~GS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~ 163 (711)
.+ ++.+.+++|.++ |.+.+. ++..++.+||.+++++++ ++++.+. . .+..
T Consensus 42 ~~~~~~~~l~~l~~i-ps~s~~e~~~~~~~~~l~~~l~~~G------~~~~~~~--~-------------------~~~~ 93 (481)
T 2pok_A 42 VAQHYFEVLRTLISK-KSVFAQQVGLKEVANYLGEIFKRVG------AEVEIDE--S-------------------YTAP 93 (481)
T ss_dssp HHHHHHHHHHHHHHS-CCCGGGCTTHHHHHHHHHHHHHHTT------CEEEEEC--S-------------------SSSC
T ss_pred hhHHHHHHHHHHHcC-CCcCCCCHHHHHHHHHHHHHHHHcC------CEEEEec--C-------------------CCCc
Confidence 45 788999999997 343332 344789999999999998 3444321 0 1347
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecCcccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 005157 164 HIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFK 222 (711)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------spGA~Dd~sGva~~LE~ar~L~~~~~~~~ 222 (711)
||+++++|+. ++.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+.+++
T Consensus 94 ~v~a~~~g~~---~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~ 170 (481)
T 2pok_A 94 FVMAHFKSSR---PDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLP 170 (481)
T ss_dssp EEEEEECCSS---TTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCS
T ss_pred EEEEEecCCC---CCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 9999998641 34688999999999874 37899999999999999999998755788
Q ss_pred CcEEEEEeCCCCCCCcchHHHHhcCCC-cCCceEEEEeec
Q 005157 223 NAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEA 261 (711)
Q Consensus 223 ~~I~flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~inLD~ 261 (711)
++|.|+|+.+||.|..|++.+++++.. .+++.++++.|.
T Consensus 171 ~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~ 210 (481)
T 2pok_A 171 VNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQG 210 (481)
T ss_dssp SEEEEEEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCC
T ss_pred CCEEEEEecccccCchhHHHHHHHhHhhccCCCEEEECCC
Confidence 999999999999999999998865421 122455666654
No 27
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.39 E-value=3.2e-12 Score=137.97 Aligned_cols=135 Identities=22% Similarity=0.269 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005157 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (711)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NV 165 (711)
.++..+.+++|.++ |.+.+ ++.++++||.+++++++ ++++.+ ..|+
T Consensus 10 ~~~~~~~~~~l~~~-ps~s~--~e~~~~~~l~~~l~~~g------~~~~~~-------------------------~~nv 55 (356)
T 3ct9_A 10 TAEAVSLLKSLISI-PSISR--EETQAADFLQNYIEAEG------MQTGRK-------------------------GNNV 55 (356)
T ss_dssp HHHHHHHHHHHHTS-CCBTT--CCHHHHHHHHHHHHHTT------CCEEEE-------------------------TTEE
T ss_pred HHHHHHHHHHHhcC-CCCCC--ChHHHHHHHHHHHHHCC------CeEEEE-------------------------eeeE
Confidence 36788889999986 44333 34578899999999988 334331 3689
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCcccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005157 166 VLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (711)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~ 226 (711)
+++++|+ +.+.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+ ++++|.
T Consensus 56 ~a~~~g~---~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~ 130 (356)
T 3ct9_A 56 WCLSPMF---DLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLI 130 (356)
T ss_dssp EEECSSC---CTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEE
T ss_pred EEEEecC---CCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEE
Confidence 9999763 124578999999999975 3788899999999999999999865 789999
Q ss_pred EEEeCCCCC-CCcchHHHHhcCCCcCCceEEEEeecC
Q 005157 227 FLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (711)
Q Consensus 227 flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~inLD~~ 262 (711)
|+|+.+||. |..|++.++++.+ ++.+++++|..
T Consensus 131 ~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 131 YLASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp EEEECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EEEEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 999999998 8999999997653 34466666654
No 28
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.39 E-value=1.3e-12 Score=144.73 Aligned_cols=140 Identities=12% Similarity=0.160 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHhcCCCCCC--------CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc
Q 005157 86 ELEAMKHVKALTQLGPHAVG--------SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (711)
Q Consensus 86 ~erA~~~L~~L~~igpr~~G--------S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 157 (711)
.+++++.|++|++|+ .+.+ ++++.++++||.++++++|.+ ++++|
T Consensus 26 ~~~~~~~l~~lv~i~-s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~-----~~~~d--------------------- 78 (434)
T 3ife_A 26 KEELIERFTRYVKID-TQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLT-----EVTMD--------------------- 78 (434)
T ss_dssp HHHHHHHHHHHHTSC-CBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCE-----EEEEC---------------------
T ss_pred HHHHHHHHHhhEEee-ccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCc-----eEEEC---------------------
Confidence 367889999999984 3333 446679999999999999821 14432
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecCcccCCC-------------------------------------------
Q 005157 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------------------------- 194 (711)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s------------------------------------------- 194 (711)
+..||+++++|++ .++.+.|++.+|+|+||..
T Consensus 79 ---~~~nv~a~~~g~~--~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~ 153 (434)
T 3ife_A 79 ---DNGYVMATLPANT--DKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHT 153 (434)
T ss_dssp ---TTSCEEEEECCBS--SSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSC
T ss_pred ---CCcEEEEEeCCCC--CCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCc
Confidence 2468999998752 1246889999999999751
Q ss_pred ----CC----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeec
Q 005157 195 ----EG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (711)
Q Consensus 195 ----pG----A~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~ 261 (711)
+| +.||+.|+|++|++++.|.+.+..++++|.|+|..+||.| .|++.+..+. -++.+++++|.
T Consensus 154 ~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~---~~~d~~~~~d~ 224 (434)
T 3ife_A 154 IITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA---FGASFAYMMDG 224 (434)
T ss_dssp EEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH---HCCSEEEECCC
T ss_pred EEECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh---cCCCEEEEecC
Confidence 12 4899999999999999999877778999999999999999 8988764221 13567777774
No 29
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.37 E-value=3.8e-12 Score=140.43 Aligned_cols=159 Identities=14% Similarity=0.069 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc-cccccce
Q 005157 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL-IYSDLNH 164 (711)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~-~Y~~~~N 164 (711)
.+++.+.+++|.++ |.+ |.++.++.+||.++|+++| ++++....... ......+ +..... ......|
T Consensus 25 ~~~~~~~l~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G------~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~ 92 (433)
T 3pfo_A 25 FNDQVAFLQRMVQF-RSV--RGEEAPQQEWLAQQFADRG------YKVDTFSLADV-DIASHPK--AAPMDTIDPAGSMQ 92 (433)
T ss_dssp HHHHHHHHHHHHTS-CCB--TTCCHHHHHHHHHHHHHTT------CEEEEEETGGG-TGGGSTT--CCCCTTCCGGGCEE
T ss_pred HHHHHHHHHHHhcC-CCC--CCCHHHHHHHHHHHHHHCC------CceEEEecchh-hhhcccc--ccccccccCCCCcE
Confidence 36788889999986 333 3345689999999999998 33433211100 0000000 000000 1235689
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCcccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005157 165 IVLRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (711)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~s---------------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~ 223 (711)
|+++++|+ .+.+.|++.+|+|+||.+ +|+.||++|+|++|++++.|.+.+.++++
T Consensus 93 via~~~g~----~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~ 168 (433)
T 3pfo_A 93 VVATADSD----GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDA 168 (433)
T ss_dssp EEEEECCC----CCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESS
T ss_pred EEEEEecC----CCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999864 356789999999999853 59999999999999999999987767889
Q ss_pred cEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecCc
Q 005157 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (711)
Q Consensus 224 ~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~G 263 (711)
+|.|+|..+||.|..|++.++++.. +..++++.|..+
T Consensus 169 ~v~~~~~~~EE~g~~G~~~~~~~~~---~~d~~i~~ep~~ 205 (433)
T 3pfo_A 169 RVHVQTVTEEESTGNGALSTLMRGY---RADACLIPEPTG 205 (433)
T ss_dssp CEEEEEESCTTTTCHHHHHHHHTTC---CCSEEEECCCCS
T ss_pred cEEEEEEecCccCChhHHHHHhcCC---CCCEEEEeCCCC
Confidence 9999999999999899999985432 456777777443
No 30
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.37 E-value=9.5e-12 Score=139.83 Aligned_cols=156 Identities=15% Similarity=0.152 Sum_probs=115.2
Q ss_pred CHHHHHHHHHHHHhcCCCC--CCCH----HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccc
Q 005157 85 SELEAMKHVKALTQLGPHA--VGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~--~GS~----~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (711)
..++..+.+++|.++ |-+ .+.+ ++.++.+||.++|+++| ++++.+.... .... .+. .
T Consensus 23 ~~~~~i~~l~~lv~i-ps~~~s~~~~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~----~~~~----~g~--~ 85 (485)
T 3dlj_A 23 HQDEFVQTLKEWVAI-ESDSVQPVPRFRQELFRMMAVAADTLQRLG------ARVASVDMGP----QQLP----DGQ--S 85 (485)
T ss_dssp THHHHHHHHHHHHTS-CCBSSSCCHHHHHHHHHHHHHHHHHHHHTT------CEEEEECCCE----EEC------CC--E
T ss_pred hHHHHHHHHHHHhcC-CCccCCCCccccHHHHHHHHHHHHHHHHcC------CeEEEEecCc----cccc----CCC--c
Confidence 357888999999997 444 4442 24589999999999998 3444321100 0000 000 0
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecCcccCC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 005157 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQW 217 (711)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------spGA~Dd~sGva~~LE~ar~L~~~ 217 (711)
+....||++++.+. ++.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.
T Consensus 86 ~~~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~ 161 (485)
T 3dlj_A 86 LPIPPVILAELGSD----PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRAL 161 (485)
T ss_dssp EECCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred cCCCcEEEEEECCC----CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHh
Confidence 00136899998643 35688999999999985 389999999999999999999988
Q ss_pred CCCCCCcEEEEEeCCCCCCCcchHHHHhcCCC--cCCceEEEEeec
Q 005157 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEA 261 (711)
Q Consensus 218 ~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~--~~~v~a~inLD~ 261 (711)
+.+++.+|.|+|..+||.|..|++.+++++.. .+++.+++++|.
T Consensus 162 ~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~ 207 (485)
T 3dlj_A 162 EQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDN 207 (485)
T ss_dssp TCCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCC
T ss_pred CCCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCC
Confidence 77889999999999999999999999976642 346788888885
No 31
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.35 E-value=4.8e-12 Score=141.95 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=105.3
Q ss_pred CCCHHHHHHHHHHH-HhcCC--------------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccc
Q 005157 83 GFSELEAMKHVKAL-TQLGP--------------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRV 147 (711)
Q Consensus 83 ~fs~erA~~~L~~L-~~igp--------------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~ 147 (711)
+.+.+++++.|++| ++|+. |+..+.++.++.+||.++++++| ++++.+
T Consensus 28 ~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G------~~v~~d----------- 90 (474)
T 2v8h_A 28 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLG------CKVKVD----------- 90 (474)
T ss_dssp CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTT------CEEEEB-----------
T ss_pred cCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcC------CEEEEe-----------
Confidence 46788999999999 98842 22346777899999999999998 344431
Q ss_pred ccccccCccccccccceEEEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 005157 148 GTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (711)
Q Consensus 148 ~g~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~f 227 (711)
+..|++++++|+ .+.+.|++.+|+|+||.. |..|++.|++++|++++.|.+.+.+++++|.|
T Consensus 91 -------------~~gnvia~~~g~----~~~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~l 152 (474)
T 2v8h_A 91 -------------KIGNMFAVYPGK----NGGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCV 152 (474)
T ss_dssp -------------TTCCEEEEECCS----SCCSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred -------------cCceEEEEECCC----CCCCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 235899999864 233589999999999963 67899999999999999999887788999999
Q ss_pred EEeCCCCC-----CCcchHHHHh
Q 005157 228 LFNTGEEE-----GLNGAHSFVT 245 (711)
Q Consensus 228 lf~~~EE~-----gl~GS~~f~~ 245 (711)
+|+.+||. |+.||+.+..
T Consensus 153 if~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 153 VVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEECCccCCCCCCCcccHHHHHh
Confidence 99999998 7789999974
No 32
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.33 E-value=5.2e-12 Score=136.64 Aligned_cols=148 Identities=20% Similarity=0.259 Sum_probs=110.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005157 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (711)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~ 162 (711)
.++.+++++.+++|.++ |.+ |.++.++++||.++|++++ ++++.+.... ....+.
T Consensus 2 ~~~~~~~~~~l~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G------~~v~~~~~~~----------------~~~~~~ 56 (373)
T 3gb0_A 2 MINQERLVNEFMELVQV-DSE--TKFEAEICKVLTKKFTDLG------VEVFEDDTMA----------------VTGHGA 56 (373)
T ss_dssp CSCHHHHHHHHHHHHTS-CCB--TTCCHHHHHHHHHHHHHTT------CEEEECSCHH----------------HHCCSS
T ss_pred CCCHHHHHHHHHHHhcc-cCC--CccHHHHHHHHHHHHHHCC------CEEEEecccc----------------ccCCCc
Confidence 36789999999999997 333 4445789999999999998 3444431100 000135
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecCcccCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005157 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA--------------GEGA----GDCSSCVAVMLELARVMSQWAHEFKNA 224 (711)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------spGA----~Dd~sGva~~LE~ar~L~~~~~~~~~~ 224 (711)
.|++++++|+ .++.+.|++.+|+|+||. ++|+ .||+.|++++|++++.|.+.+. ++++
T Consensus 57 ~nv~a~~~g~---~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~ 132 (373)
T 3gb0_A 57 GNLICTLPAT---KDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGT 132 (373)
T ss_dssp CCEEEEECCS---STTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred eeEEEEecCC---CCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 7999999874 135678999999999974 3566 5999999999999999998654 7899
Q ss_pred EEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecC
Q 005157 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (711)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~ 262 (711)
|.|+|..+||.|..|++.+..+.. +....+++|..
T Consensus 133 v~~~~~~~EE~g~~Ga~~~~~~~~---~~~~~~~~~~~ 167 (373)
T 3gb0_A 133 IEFIITVGEESGLVGAKALDRERI---TAKYGYALDSD 167 (373)
T ss_dssp EEEEEESCGGGTSHHHHHSCGGGC---CCSEEEEEEEC
T ss_pred EEEEEEeccccCchhhhhhCHHhc---CCCEEEEEcCC
Confidence 999999999999999998863221 33455566643
No 33
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.32 E-value=7.6e-12 Score=135.13 Aligned_cols=138 Identities=22% Similarity=0.216 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005157 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (711)
+++.+.+++|.++ |.+ |.++.++.+||.++|+++|.+ .++++. ...|++
T Consensus 13 ~~~~~~~~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G~~-----~~~~~~-----------------------~~~~~~ 61 (369)
T 3tx8_A 13 GDPIVLTQRLVDI-PSP--SGQEKQIADEIEDALRNLNLP-----GVEVFR-----------------------FNNNVL 61 (369)
T ss_dssp SCHHHHHHHHHSS-CCB--TTCTHHHHHHHHHHHHTTTCT-----TCEEEE-----------------------ETTEEE
T ss_pred HHHHHHHHHHhcC-CCC--CccHHHHHHHHHHHHHhcCCC-----CcEEec-----------------------cCCcEE
Confidence 4678899999986 343 334468899999999998731 123321 125899
Q ss_pred EEEcCCCCCCCCCCeEEEeecCcccCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 005157 167 LRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (711)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~ 232 (711)
++++++ +.+.|++.+|+|+||. ++|+.||++|+|++|++++.|++. .+++++|.|+|..+
T Consensus 62 a~~~~~-----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~ 135 (369)
T 3tx8_A 62 ARTNRG-----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYEC 135 (369)
T ss_dssp EECCCC-----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECC
T ss_pred EEecCC-----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEec
Confidence 998763 3578999999999986 389999999999999999999863 46789999999999
Q ss_pred CCCCC--cchHHHHhcCCCcCCceEEEEeec
Q 005157 233 EEEGL--NGAHSFVTQHPWSTTIRVAVDLEA 261 (711)
Q Consensus 233 EE~gl--~GS~~f~~~h~~~~~v~a~inLD~ 261 (711)
||.|. .|++.++++++...+...+++.|.
T Consensus 136 EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep 166 (369)
T 3tx8_A 136 EEVADHLNGLGHIRDEHPEWLAADLALLGEP 166 (369)
T ss_dssp CSSCTTSCHHHHHHHHCGGGGCCSEEEECCC
T ss_pred cccCcccccHHHHHHhcccccCCCEEEEeCC
Confidence 99987 799999977643234556677664
No 34
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.32 E-value=6.7e-12 Score=138.14 Aligned_cols=127 Identities=15% Similarity=0.057 Sum_probs=102.5
Q ss_pred CHHHHHHHHHHHHhcCCCC-------CCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc
Q 005157 85 SELEAMKHVKALTQLGPHA-------VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~-------~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 157 (711)
..+++++.|++|++|+... ..+.++.++.+||.++++++| ++++.|
T Consensus 7 ~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G------~~v~~~--------------------- 59 (423)
T 1z2l_A 7 FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASG------LETRFD--------------------- 59 (423)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEC---------------------
T ss_pred cHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcC------CEEEEe---------------------
Confidence 3578999999999985322 224667799999999999998 334331
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC--
Q 005157 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE-- 235 (711)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~-- 235 (711)
+..|++++++|++ +..+.|++.+|+|+||. .|..|++.|++++|++++.|++.+.+++++|.|+|+.+||.
T Consensus 60 ---~~gnv~a~~~g~~---~~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~ 132 (423)
T 1z2l_A 60 ---EVGNLYGRLNGTE---YPQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSR 132 (423)
T ss_dssp ---TTSCEEEEECCSS---EEEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCS
T ss_pred ---cCCcEEEEEcCCC---CCCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccc
Confidence 2349999998641 22478999999999995 48899999999999999999987778899999999999998
Q ss_pred ---CCcchHHHHh
Q 005157 236 ---GLNGAHSFVT 245 (711)
Q Consensus 236 ---gl~GS~~f~~ 245 (711)
|+.||+.+..
T Consensus 133 ~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 133 FPYVFWGSKNIFG 145 (423)
T ss_dssp SSCSCHHHHHHTT
T ss_pred cCCCcccHHHHHc
Confidence 5679999885
No 35
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.31 E-value=3.5e-11 Score=129.18 Aligned_cols=226 Identities=15% Similarity=0.188 Sum_probs=148.4
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEE
Q 005157 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (711)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~ 167 (711)
+..+.|++|+++ |.+.|. ++++++|+.+++++++. ++++| +..|+++
T Consensus 6 ~~~~~l~~Lv~~-~s~sg~--e~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia 52 (346)
T 1vho_A 6 ETGKLLMELSNL-DGPSGY--ETNVVSYIKSVIEPFVD------EAKTT------------------------RHGSLIG 52 (346)
T ss_dssp CHHHHHHHHHHS-CCBTTC--CHHHHHHHHHHHGGGCS------EEEEC------------------------TTSCEEE
T ss_pred HHHHHHHHHHcC-CCCCcc--hHHHHHHHHHHHHhhCC------EEEEe------------------------cCCcEEE
Confidence 456789999997 455553 35689999999999872 34432 3469999
Q ss_pred EEcCCCCCCCCCCeEEEeecCcccCC---------------------------------C--------------------
Q 005157 168 RILPKYASEAGENAILVSSHIDTVSA---------------------------------G-------------------- 194 (711)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------------------s-------------------- 194 (711)
+++|+ ..+.+++++|+|+|+. .
T Consensus 53 ~~~g~-----~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~ 127 (346)
T 1vho_A 53 YKKGK-----GIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESR 127 (346)
T ss_dssp EECCS-----SSCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHH
T ss_pred EEcCC-----CCceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhc
Confidence 98764 2378999999999941 0
Q ss_pred ---------------------CC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005157 195 ---------------------EG-------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (711)
Q Consensus 195 ---------------------pG-------------------A~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE 234 (711)
.| +.||+.|+++++++++.+.+.+ ++.++.++|+.+||
T Consensus 128 ~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EE 205 (346)
T 1vho_A 128 KKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEE 205 (346)
T ss_dssp HTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTS
T ss_pred ccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcc
Confidence 11 4799999999999999997643 56899999999999
Q ss_pred CCCcchHHHHhcCCCcCCceEEEEeecCcCCCCcc----ccccC--------CCHHHHHHHHHHccCCCCcccccccccC
Q 005157 235 EGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSA----LFQAG--------PNLWAVENFAAVAKYPSGQIIGQDLFAS 302 (711)
Q Consensus 235 ~gl~GS~~f~~~h~~~~~v~a~inLD~~G~gG~~~----lfqtg--------~~~~l~~~~~~~a~~p~~~~l~~~~f~~ 302 (711)
.|+.|++.... .. +....+.+|....++... -...| .++.+.+...++++. .+.........
T Consensus 206 vG~~Ga~~~~~--~i--~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~-~gi~~~~~~~~- 279 (346)
T 1vho_A 206 TGCLGALTGAY--EI--NPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKK-HNVSLQEEAVG- 279 (346)
T ss_dssp SSHHHHHHTTC--CC--CCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHH-TTCCCEEESSC-
T ss_pred cchhhHHHHhc--cc--CCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHH-CCCCEEEEeCC-
Confidence 99999886542 21 224567788765542100 01111 356666666655432 12111111111
Q ss_pred CCCCCCCchHHHhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005157 303 GVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (711)
Q Consensus 303 g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~ 366 (711)
| +..||...+.. ..|+|.+++.- ... ..|++ -|.++.+.++...+.+..++..+...
T Consensus 280 g--~ggsDa~~~~~~~~gipt~~lg~-~~~-~~Hs~---~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 280 G--RSGTETDFVQLVRNGVRTSLISI-PLK-YMHTP---VEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp C--C----CTTHHHHHTTCEEEEEEE-ECB-STTST---TEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred C--CCCchHHHHHHhCCCCcEEEEeh-hhc-ccccH---HHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 1 15788888842 37999998643 333 38987 46788999999999999999886653
No 36
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.30 E-value=3.3e-11 Score=129.37 Aligned_cols=220 Identities=17% Similarity=0.222 Sum_probs=148.6
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEc
Q 005157 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (711)
Q Consensus 91 ~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~ 170 (711)
+.|++|+++ |.+.|.+ +++++|+.+++++++. ++++| +..|++++++
T Consensus 7 ~~l~~Lv~~-~s~sg~e--~~~~~~l~~~l~~~g~------~v~~d------------------------~~gnlia~~~ 53 (348)
T 1ylo_A 7 SLLKALSEA-DAIASSE--QEVRQILLEEAARLQK------EVRFD------------------------GLGSVLIRLN 53 (348)
T ss_dssp HHHHHHHHS-CCBTTBC--HHHHHHHHHHHHHTTC------CEEEC------------------------TTCCEEEECC
T ss_pred HHHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEe------------------------cCCCEEEEec
Confidence 678999997 4555533 4689999999999873 34432 2358999887
Q ss_pred CCCCCCCCCCeEEEeecCcccCC---------------------------------------------------------
Q 005157 171 PKYASEAGENAILVSSHIDTVSA--------------------------------------------------------- 193 (711)
Q Consensus 171 g~~~~~~~~~~Vll~aH~DSv~~--------------------------------------------------------- 193 (711)
|+ ..+.|++++|+|||+.
T Consensus 54 g~-----~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~i 128 (348)
T 1ylo_A 54 ES-----TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRV 128 (348)
T ss_dssp CC-----SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEE
T ss_pred CC-----CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEE
Confidence 53 2468999999999950
Q ss_pred ---------------CCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCc
Q 005157 194 ---------------GEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN 238 (711)
Q Consensus 194 ---------------spG--------------------A~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~ 238 (711)
..| +.||+.|+++++++++.+.+. .++.++.++|+.+||.|+.
T Consensus 129 d~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa~l~al~~l~~~--~~~~~~~~~~t~~EEvG~~ 206 (348)
T 1ylo_A 129 DIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLR 206 (348)
T ss_dssp ECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCCTTSSH
T ss_pred EecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHHHHHHHHHhhhc--CCCceEEEEEEcccccchh
Confidence 012 489999999999999998764 3668999999999999999
Q ss_pred chHHHHhcCCCcCCceEEEEeecCcCCCCc---------------cccc-cC--CCHHHHHHHHHHccCCCCcccccccc
Q 005157 239 GAHSFVTQHPWSTTIRVAVDLEAMGIGGRS---------------ALFQ-AG--PNLWAVENFAAVAKYPSGQIIGQDLF 300 (711)
Q Consensus 239 GS~~f~~~h~~~~~v~a~inLD~~G~gG~~---------------~lfq-tg--~~~~l~~~~~~~a~~p~~~~l~~~~f 300 (711)
|++......+ ....+++|....++.. .-.. .. .++.+.+...++++. .+.....+..
T Consensus 207 Ga~~~~~~i~----~~~~i~~D~~~~~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~-~gi~~~~~~~ 281 (348)
T 1ylo_A 207 GGQTATRAVS----PDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAE-IGVPLQADMF 281 (348)
T ss_dssp HHHHHHHHHC----CSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHH-HTCCCEEEEC
T ss_pred HHHHhhcccC----CCEEEEEeccccCCCCCCCccccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCeEEeec
Confidence 9877653221 2466888876653211 1010 11 256666666554321 1111111111
Q ss_pred cCCCCCCCCchHHHhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005157 301 ASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (711)
Q Consensus 301 ~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La 364 (711)
.+..||...+.. ..|+|.+++. .... ..||+ -|.++.+.+....+.+..++..++
T Consensus 282 ----~~ggsDa~~~~~~~~gipt~~lg-~~~~-~~Hs~---~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 282 ----SNGGTDGGAVHLTGTGVPTLVMG-PATR-HGHCA---ASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp ----SSCCCHHHHHHTSTTCCCEEEEE-CCCB-SCSSS---CEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred ----CCCcchHHHHHHhcCCCCEEEEC-cccC-cCCCc---ceEeeHHHHHHHHHHHHHHHHHhh
Confidence 246899999853 2699999663 3333 48987 477889999999999998888764
No 37
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.30 E-value=7.8e-12 Score=135.35 Aligned_cols=138 Identities=22% Similarity=0.251 Sum_probs=104.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005157 85 SELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~ 163 (711)
+.+++.+.+++|.++ |.+... .++.++.+||.+++++++. +++.+ ..
T Consensus 4 ~~~~~~~~l~~l~~i-ps~s~~~~~e~~~~~~l~~~l~~~G~------~~~~~-------------------------~~ 51 (364)
T 2rb7_A 4 SMQHIVELTSDLIRF-PSMHSRPEQISRCAGFIMDWCAQNGI------HAERM-------------------------DH 51 (364)
T ss_dssp HHHHHHHHHHHHHTS-CCCTTCHHHHHHHHHHHHHHHHHTTC------CCEEE-------------------------EE
T ss_pred cHHHHHHHHHHHHcC-CCCCCCcchHHHHHHHHHHHHHHcCC------eEEEe-------------------------cC
Confidence 357889999999997 333333 3445899999999999983 33321 14
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecCcccCC---------------CCCCCCChhHHHHHHHHHHHHHhcCCCC---CCc-
Q 005157 164 HIVLRILPKYASEAGENAILVSSHIDTVSA---------------GEGAGDCSSCVAVMLELARVMSQWAHEF---KNA- 224 (711)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------spGA~Dd~sGva~~LE~ar~L~~~~~~~---~~~- 224 (711)
|++++++++. .++.+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.++ +++
T Consensus 52 ~~~~~~~~~~--~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~ 129 (364)
T 2rb7_A 52 DGIPSVMVLP--EKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDM 129 (364)
T ss_dssp TTEEEEEECS--BTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred CCceEEEEEc--CCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCc
Confidence 5677776521 124578999999999975 4789999999999999999999865555 457
Q ss_pred -EEEEEeCCCCC-CCcchHHHHhcCCCcCCceEEEEee
Q 005157 225 -VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLE 260 (711)
Q Consensus 225 -I~flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~inLD 260 (711)
|.|+|+.+||. |+.|++.++++. +..+.+++|
T Consensus 130 ~v~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d 163 (364)
T 2rb7_A 130 ALGLLITGDEEIGGMNGAAKALPLI----RADYVVALD 163 (364)
T ss_dssp CEEEEEESCGGGTSTTTHHHHGGGC----EEEEEEECS
T ss_pred cEEEEEEeccccCchhhHHHHHhcC----CCCEEEEcc
Confidence 99999999996 679999998654 355667755
No 38
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.27 E-value=6.7e-11 Score=131.91 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=100.9
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCH----------HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccC
Q 005157 85 SELEAMKHVKALTQLGPHAVGSD----------ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKG 154 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~----------~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~ 154 (711)
..+++++.+++|.++ |...+.+ +..++.+||.++++++| ++++..
T Consensus 12 ~~~~~~~~l~~l~~i-ps~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G------~~~~~~------------------ 66 (470)
T 1lfw_A 12 KKDAILKDLEELIAI-DSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDG------FDTENF------------------ 66 (470)
T ss_dssp THHHHHHHHHHHHTS-CCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEEE------------------
T ss_pred hHHHHHHHHHHHcCC-CCcCCCccccccCCCcHHHHHHHHHHHHHHHHcC------CeEEEe------------------
Confidence 357899999999997 4444332 44689999999999998 333320
Q ss_pred ccccccccceEEEEEcCCCCCCCCCCeEEEeecCcccCC--------------------CCCCCCChhHHHHHHHHHHHH
Q 005157 155 KTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVM 214 (711)
Q Consensus 155 ~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------spGA~Dd~sGva~~LE~ar~L 214 (711)
...++++++ |+ ..+.|++.+|+|+||. ++|+.||+.|++++|++++.|
T Consensus 67 ------~~~~~~~~~-g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l 134 (470)
T 1lfw_A 67 ------ANYAGRVNF-GA-----GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLL 134 (470)
T ss_dssp ------TTTEEEEEE-CC-----CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHH
T ss_pred ------cCeEEEEEe-CC-----CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHH
Confidence 113566766 43 2478999999999874 367899999999999999999
Q ss_pred HhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCC
Q 005157 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (711)
Q Consensus 215 ~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~ 248 (711)
++.+.+++++|.|+|+.+||.|..|++.+++++.
T Consensus 135 ~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 135 KEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp HHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred HHcCCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 9887788999999999999999999999997654
No 39
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.26 E-value=2e-11 Score=133.11 Aligned_cols=141 Identities=18% Similarity=0.232 Sum_probs=104.6
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005157 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~N 164 (711)
+.++..+.+++|.++ |.. |.++.++.+||.++|+++| ++++... . .+..|
T Consensus 4 ~~~~~~~~l~~lv~~-ps~--s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-------------------~~~~n 53 (393)
T 1vgy_A 4 TETQSLELAKELISR-PSV--TPDDRDCQKLMAERLHKIG------FAAEEMH--F-------------------GNTKN 53 (393)
T ss_dssp CCSHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHTTT------CEEEECC--B-------------------TTBCE
T ss_pred chHHHHHHHHHHhcC-CCC--CCCcHHHHHHHHHHHHHcC------CcEEEEe--c-------------------CCCcE
Confidence 346788999999986 333 3334568999999999988 3343310 0 13579
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecCcccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005157 165 IVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (711)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------spGA~Dd~sGva~~LE~ar~L~~~~~~~~~ 223 (711)
+++++ |+ ..+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.++++
T Consensus 54 v~a~~-g~-----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~ 127 (393)
T 1vgy_A 54 IWLRR-GT-----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQG 127 (393)
T ss_dssp EEEEE-CS-----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSS
T ss_pred EEEEE-CC-----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCC
Confidence 99998 53 2478999999999985 368889999999999999999987777899
Q ss_pred cEEEEEeCCCCCC-CcchHHHHhcCCC-cCCceEEEEeec
Q 005157 224 AVIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAVDLEA 261 (711)
Q Consensus 224 ~I~flf~~~EE~g-l~GS~~f~~~h~~-~~~v~a~inLD~ 261 (711)
+|+|+|+.+||.+ +.|++.+++.... ..++.+++..|.
T Consensus 128 ~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~ 167 (393)
T 1vgy_A 128 SIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEP 167 (393)
T ss_dssp EEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCC
T ss_pred cEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCC
Confidence 9999999999984 6899988753211 123455555553
No 40
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.24 E-value=2.1e-11 Score=133.31 Aligned_cols=151 Identities=20% Similarity=0.245 Sum_probs=109.1
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005157 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (711)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~ 160 (711)
..+.+.++.++.+++|.++ |.+ |.++.++++||.++|+++| ++++.+..... .-.
T Consensus 18 ~~~~~~~~~~~~l~~L~~i-ps~--s~~E~~~~~~l~~~l~~~G------~~v~~~~~~~~----------------~~~ 72 (396)
T 3rza_A 18 QGMINEQRLLNTFLELVQI-DSE--TGNESTIQPILKEKFIALG------LDVKEDEAAKH----------------PKL 72 (396)
T ss_dssp -CCSCHHHHHHHHHHHHTS-CCB--TTCTTTHHHHHHHHHHHTT------CEEEECSGGGS----------------TTC
T ss_pred EEeecHHHHHHHHHHHeec-CCC--CcCHHHHHHHHHHHHHHCC------CEEEEeccccc----------------cCC
Confidence 3567899999999999997 333 3445689999999999998 34444311000 001
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecCcccCC---------------CCCC----CCChhHHHHHHHHHHHHHhcCCCC
Q 005157 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------GEGA----GDCSSCVAVMLELARVMSQWAHEF 221 (711)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------spGA----~Dd~sGva~~LE~ar~L~~~~~~~ 221 (711)
+..||+++++|+. +.++.+.|++.+|+|+||. ++|+ .||+.|++++|++++.|.+.+ .+
T Consensus 73 ~~~nvia~~~g~~-~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~-~~ 150 (396)
T 3rza_A 73 GANNLVCTMNSTI-EEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQ-IP 150 (396)
T ss_dssp SSCCEEEEECCCC-C---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHT-CC
T ss_pred CCceEEEEECCcC-CCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcC-CC
Confidence 3579999998631 0134678999999999963 3566 499999999999999998875 36
Q ss_pred CCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeec
Q 005157 222 KNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (711)
Q Consensus 222 ~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~ 261 (711)
+++|.|+|..+||.|..|++.+..+.. +....+++|.
T Consensus 151 ~~~v~~~~~~~EE~g~~Ga~~~~~~~~---~~~~~~~~~~ 187 (396)
T 3rza_A 151 HGQIQFVITVGEESGLIGAKELNSELL---DADFGYAIDA 187 (396)
T ss_dssp CCCEEEEEESCGGGTSHHHHHCCGGGC---CCSEEEEEEE
T ss_pred CCCEEEEEEcccccccHhHhhhchhhc---ccceEEEEec
Confidence 799999999999999999998864321 2344555554
No 41
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.24 E-value=9.6e-11 Score=127.02 Aligned_cols=225 Identities=20% Similarity=0.182 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005157 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (711)
.+.++.|++|+++ |.+.|.+ +++++|+.+++++++. +++.| +..|++
T Consensus 3 ~~~~~~l~~L~~i-ps~SG~E--~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNli 49 (355)
T 3kl9_A 3 TTLFSKIKEVTEL-AAVSGHE--APVRAYLREKLTPHVD------EVVTD------------------------GLGGIF 49 (355)
T ss_dssp HHHHHHHHHHHTS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEE
T ss_pred HHHHHHHHHHHhC-CCCCCCH--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCeEE
Confidence 3578899999996 6666654 6789999999999872 44432 356999
Q ss_pred EEEcCCCCCCCCCCeEEEeecCcccCC--------C--------------------------------------------
Q 005157 167 LRILPKYASEAGENAILVSSHIDTVSA--------G-------------------------------------------- 194 (711)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~--------s-------------------------------------------- 194 (711)
++++|++ ++.+.|++.||+|+|+. +
T Consensus 50 ~~~~g~~---~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~ 126 (355)
T 3kl9_A 50 GIKHSEA---VDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRG 126 (355)
T ss_dssp EEECCCS---TTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------
T ss_pred EEECCcC---CCCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccCh
Confidence 9998751 24678999999998862 0
Q ss_pred ---------------------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005157 195 ---------------------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (711)
Q Consensus 195 ---------------------------------------------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~ 223 (711)
..+-||.+||++++|+++.+++. ++++
T Consensus 127 ~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~ 204 (355)
T 3kl9_A 127 KGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGN 204 (355)
T ss_dssp ------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSS
T ss_pred hhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCc
Confidence 23779999999999999998753 5789
Q ss_pred cEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecCcCCC-----------Ccccccc-C--CCHHHHHHHHHHccC
Q 005157 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-----------RSALFQA-G--PNLWAVENFAAVAKY 289 (711)
Q Consensus 224 ~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~G~gG-----------~~~lfqt-g--~~~~l~~~~~~~a~~ 289 (711)
+++++|+..||.|+.|++....... ...+|.+|+..++. +.+-... + .++.+.+...+.++.
T Consensus 205 ~v~~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~ 280 (355)
T 3kl9_A 205 ELYLGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEE 280 (355)
T ss_dssp EEEEEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHHH
T ss_pred eEEEEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999988764322 13478888754432 1111111 1 267777777665432
Q ss_pred CCCcccccccccCCCCCCCCchHHHhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005157 290 PSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (711)
Q Consensus 290 p~~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La 364 (711)
.+.. .|..+. ..+||-..+.. ..|+|..++.. ... +.||+. |.++.+.+++..+.+.++++.|.
T Consensus 281 -~gIp-~q~~~~----ggGtDa~~i~~a~~Gipt~~igv-p~~-~~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 281 -AGIK-YQYYCG----KGGTDAGAAHLKNGGVPSTTIGV-CAR-YIHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp -TTCC-EEEEEC----SSCCTHHHHTTSTTCCCEEEEEE-EEB-SCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred -cCCC-EEEECC----CcchHHHHHHHhCCCCCEEEEcc-CcC-CCCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 1111 111221 25899888764 26899998753 222 378865 78899999999999988887654
No 42
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.24 E-value=1.3e-11 Score=135.67 Aligned_cols=138 Identities=16% Similarity=0.180 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHhcCCCCCC--------CHHHHHHHHHHHHHHHhhccccCCcce-EEEEeeeccCCCcccccccccCccc
Q 005157 87 LEAMKHVKALTQLGPHAVG--------SDALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFKGKTL 157 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~G--------S~~~~~a~~yL~~~l~~ig~~~~~~~~-vevd~f~~~~g~~~~~g~~~~~~~~ 157 (711)
+++++.|++|.++. .+.+ ++++.++++||.+++++++. + ++.+
T Consensus 2 ~~~~~~l~~Lv~i~-s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~------~~~~~~--------------------- 53 (417)
T 1fno_A 2 DKLLERFLHYVSLD-TQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGL------VNITLS--------------------- 53 (417)
T ss_dssp CSHHHHHHHHHTSC-CBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTC------EEEEEC---------------------
T ss_pred hHHHHHHHHhEEec-CCCCcccCCCCCCccHHHHHHHHHHHHHHcCC------CeEEEC---------------------
Confidence 35778899999874 2223 34667899999999999982 3 3321
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecCcccCCC-------------------------------------------
Q 005157 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------------------------- 194 (711)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s------------------------------------------- 194 (711)
+..||+++++|++ ..+.+.|++.+|+|+||..
T Consensus 54 ---~~~nvia~~~g~~--~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~ 128 (417)
T 1fno_A 54 ---EKGTLMATLPANV--EGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTL 128 (417)
T ss_dssp ---TTCCEEEEECCSS--CSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCE
T ss_pred ---CCceEEEEECCCC--CCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcE
Confidence 2369999998641 1135789999999999742
Q ss_pred ---CCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecC
Q 005157 195 ---EGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (711)
Q Consensus 195 ---pGA----~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~ 262 (711)
+|+ .||+.|+|++|++++.|++.+ .++++|+|+|+.+||.| .|++.+..+. . +....+++|..
T Consensus 129 l~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 129 ITTDGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp EECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred EEcCCccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 132 889999999999999999876 78899999999999998 8998776321 1 34566777653
No 43
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.24 E-value=5.3e-11 Score=134.24 Aligned_cols=128 Identities=16% Similarity=0.257 Sum_probs=100.8
Q ss_pred CHHHHHHHHHHHHhcCCCCCCC----------HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccC
Q 005157 85 SELEAMKHVKALTQLGPHAVGS----------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKG 154 (711)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS----------~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~ 154 (711)
..++..+.+++|.++. -+.+. ++..++.+|+.++++++| ++++.
T Consensus 32 ~~~~~~~~l~~lv~ip-s~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G------~~~~~------------------- 85 (492)
T 3khx_A 32 YEDQIINDLKGLLAIE-SVRDDAKASEDAPVGPGPRKALDYMYEIAHRDG------FTTHD------------------- 85 (492)
T ss_dssp THHHHHHHHHHHHTSC-CCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEE-------------------
T ss_pred hHHHHHHHHHHHhcCC-CCCCCcccccccccchHHHHHHHHHHHHHHHcC------CcceE-------------------
Confidence 4578899999999873 33332 345689999999999998 33332
Q ss_pred ccccccccceEEEEEcCCCCCCCCCCeEEEeecCcccCC-------------------CCCCCCChhHHHHHHHHHHHHH
Q 005157 155 KTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMS 215 (711)
Q Consensus 155 ~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------spGA~Dd~sGva~~LE~ar~L~ 215 (711)
..|++++++.. +.++.|++.+|+|+||. ++|+.||++|++++|++++.|+
T Consensus 86 -------~~~~~~~~~~g----~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~ 154 (492)
T 3khx_A 86 -------VDHIAGRIEAG----KGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILE 154 (492)
T ss_dssp -------ETTTEEEEEEE----CSSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHH
T ss_pred -------eCCEEEEEEeC----CCCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHH
Confidence 12344444421 23578999999999985 2699999999999999999999
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCC
Q 005157 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW 249 (711)
Q Consensus 216 ~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~ 249 (711)
+.+.+++++|.|+|..+||.|..|++.++++++.
T Consensus 155 ~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~ 188 (492)
T 3khx_A 155 DMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEM 188 (492)
T ss_dssp HTTCCCSSEEEEEEECCTTCCCCTTSHHHHHSCC
T ss_pred HcCCCCCCCEEEEEECCccCCCcCHHHHHHhCcC
Confidence 8877889999999999999999999999987753
No 44
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.21 E-value=9.4e-11 Score=126.25 Aligned_cols=138 Identities=20% Similarity=0.223 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005157 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (711)
++..+.+++|.++ |-+ |..+.++++||.++|++++ .+++.. . +.+..|++
T Consensus 3 ~~~~~~~~~L~~~-ps~--s~~e~~~~~~l~~~l~~~g------~~~~~~--~-------------------~~~~~n~~ 52 (377)
T 3isz_A 3 EKVVSLAQDLIRR-PSI--SPNDEGCQQIIAERLEKLG------FQIEWM--P-------------------FNDTLNLW 52 (377)
T ss_dssp HHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHHTT------CEEEEC--C-------------------BTTBCEEE
T ss_pred hHHHHHHHHHhcC-CCC--CCChhhHHHHHHHHHHHCC------CceEEe--e-------------------cCCCceEE
Confidence 5778899999986 333 3334578999999999998 333321 0 01457999
Q ss_pred EEEcCCCCCCCCCCeEEEeecCcccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005157 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (711)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~s---------------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I 225 (711)
+++ |+ +.+.|++.+|+|+||.. +|+.|++.|++++|++++.+.+.+.+++++|
T Consensus 53 a~~-g~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v 126 (377)
T 3isz_A 53 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 126 (377)
T ss_dssp EEE-ES-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceE
Confidence 988 53 35789999999999852 6778999999999999999988777788999
Q ss_pred EEEEeCCCCCCC-cchHHHHhcCCC-cCCceEEEEee
Q 005157 226 IFLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLE 260 (711)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~h~~-~~~v~a~inLD 260 (711)
.|+|..+||.+. .|++.+++.... ..++.+++..|
T Consensus 127 ~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e 163 (377)
T 3isz_A 127 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGE 163 (377)
T ss_dssp EEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECC
T ss_pred EEEEEcccccCccccHHHHHHHHHhcCCCCCEEEEcC
Confidence 999999999986 699988753211 12344555544
No 45
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.20 E-value=4.9e-11 Score=133.66 Aligned_cols=145 Identities=13% Similarity=0.182 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHhcCCCCCCC--------HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccc
Q 005157 87 LEAMKHVKALTQLGPHAVGS--------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~GS--------~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (711)
+++.+.+++|.++. -..+. .++.++.+|+.++|+++|.+ ..++++. ...
T Consensus 18 ~~~~~~l~~lv~ip-s~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~---~~~~~~~--~~~----------------- 74 (472)
T 3pfe_A 18 EEILPSLCDYIKIP-NKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPK---GMTLEIV--RLK----------------- 74 (472)
T ss_dssp HTHHHHHHHHHTCC-CBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCT---TCEEEEE--CCT-----------------
T ss_pred HHHHHHHHHHhCCC-CcCCCccccccccchHHHHHHHHHHHHHHcCCC---CcceEEE--ecC-----------------
Confidence 45788899999873 22221 12468999999999999842 1123321 110
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecCcccCC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 005157 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQW 217 (711)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------spGA~Dd~sGva~~LE~ar~L~~~ 217 (711)
....||+++++|+ +.+.|++.+|+|+||. ++|+.||+.|++++|++++.|++.
T Consensus 75 -~~~~~v~a~~~g~-----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~ 148 (472)
T 3pfe_A 75 -NRTPLLFMEIPGQ-----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQ 148 (472)
T ss_dssp -TSCCEEEEEECCS-----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHT
T ss_pred -CCCcEEEEEEcCC-----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHc
Confidence 0247999999763 3478999999998873 278999999999999999999987
Q ss_pred CCCCCCcEEEEEeCCCCCCCcchHHHHhcCCC-cCCceEEEEeec
Q 005157 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEA 261 (711)
Q Consensus 218 ~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~inLD~ 261 (711)
+.+++ +|.|+|..+||.|..|++.++++++. .+++.+++.+|.
T Consensus 149 ~~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~ 192 (472)
T 3pfe_A 149 GLPYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDS 192 (472)
T ss_dssp TCCCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECC
T ss_pred CCCCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCC
Confidence 76666 99999999999999999999976531 235677888874
No 46
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.20 E-value=4.5e-11 Score=134.73 Aligned_cols=140 Identities=16% Similarity=0.235 Sum_probs=107.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005157 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (711)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~ 161 (711)
.+++.++.++.+++|.++ |++.+ ++.++.+||.++++++| ++++.| .
T Consensus 9 ~~~~~~~~~~~~~~L~~i-ps~s~--~e~~~~~~l~~~l~~~G------~~v~~~------------------------~ 55 (490)
T 3mru_A 9 STLSPAPLWQFFDKICSI-PHPSK--HEEALAQYIVTWATEQG------FDVRRD------------------------P 55 (490)
T ss_dssp GGSSSHHHHHHHHHHHHS-CCBTT--CCTTHHHHHHHHHHHTT------CEEEEC------------------------T
T ss_pred hccCHHHHHHHHHHHhCC-CCCCC--CHHHHHHHHHHHHHHcC------CEEEEc------------------------C
Confidence 457889999999999997 56544 34689999999999998 334331 2
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecCcccCCC------------------------CCCC---CChhHHHHHHHHHHHH
Q 005157 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVM 214 (711)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s------------------------pGA~---Dd~sGva~~LE~ar~L 214 (711)
..|++++++|+. +.++.+.|++.+|+|+||.. +|+. ||+.|+|++|++++
T Consensus 56 ~~nv~a~~~g~~-g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~-- 132 (490)
T 3mru_A 56 TGNVFIKKPATP-GMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA-- 132 (490)
T ss_dssp TCCEEEEECCCT-TCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH--
T ss_pred CCeEEEEEcCCC-CCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH--
Confidence 359999998641 11356889999999999753 4775 99999999999763
Q ss_pred HhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecC
Q 005157 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (711)
Q Consensus 215 ~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~ 262 (711)
....++.+|.|+|+.+||.|+.|++.+.++. -+....+|+|..
T Consensus 133 --~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 --SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp --CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred --hCCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 2345688999999999999999999988432 245678888853
No 47
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.15 E-value=5e-11 Score=127.32 Aligned_cols=224 Identities=13% Similarity=0.068 Sum_probs=145.6
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEE
Q 005157 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (711)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~ 167 (711)
+.++.|++|+++ |.+.|. ++.+++||.+++++++.+ +++|..... + .+..|+++
T Consensus 18 ~~~~~l~~Lv~i-~s~sg~--e~~v~~~l~~~l~~~g~~------v~~d~~~~~-------~----------~~~gnlia 71 (321)
T 3cpx_A 18 QGMQLLKELCSI-HAPSGN--EEPLKDFILEYIRSNAGS------WSYQPVIYA-------D----------NDLQDCIV 71 (321)
T ss_dssp CHHHHHHHHHHS-CCBTTC--CHHHHHHHHHHHHHHGGG------SSSCCEEEC-------S----------GGGTTCEE
T ss_pred HHHHHHHHHHcC-CCCCCC--HHHHHHHHHHHHHhhCCe------EEEcccccc-------c----------cCCccEEE
Confidence 357789999997 555543 346799999999999853 222110000 0 12579999
Q ss_pred EEcCCCCCCCCCCeEEEeecCcccC-----------C---------------------------------------CCC-
Q 005157 168 RILPKYASEAGENAILVSSHIDTVS-----------A---------------------------------------GEG- 196 (711)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~aH~DSv~-----------~---------------------------------------spG- 196 (711)
+++| . +.+++.||+|+|+ . .+|
T Consensus 72 ~~~g------~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd 144 (321)
T 3cpx_A 72 LVFG------N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGT 144 (321)
T ss_dssp EEES------S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTC
T ss_pred EecC------C-ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCC
Confidence 8754 2 5699999999983 0 122
Q ss_pred ------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEE
Q 005157 197 ------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVD 258 (711)
Q Consensus 197 ------------------A~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~in 258 (711)
+.||++||++++|+++.+. + ++++|++.||.|+.|++....-....-+..++++
T Consensus 145 ~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~~~~~~i~ 216 (321)
T 3cpx_A 145 EVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETFHVKQSLI 216 (321)
T ss_dssp EEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHHCCCEEEE
T ss_pred EEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccccCCCEEEE
Confidence 5899999999999998753 2 9999999999999999863310000113357888
Q ss_pred eecCcCCC-------Ccccc--ccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhh-cCCceEEEEeee
Q 005157 259 LEAMGIGG-------RSALF--QAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYT 328 (711)
Q Consensus 259 LD~~G~gG-------~~~lf--qtg~~~~l~~~~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~ 328 (711)
+|....+. ...-. ...+++.+.+...+.++. .+.....+.+ .+++||-..+.. ..|+|.+++.-.
T Consensus 217 ~D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~-~gi~~q~~~~----~~GGsD~~~~~~s~~Gipt~~lG~~ 291 (321)
T 3cpx_A 217 CDITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQ-TDIPFQLEVE----GAGASDGRELQLSPYPWDWCFIGAP 291 (321)
T ss_dssp CCCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTT-SSCCEEEEEC----SSCCCHHHHHHHSSSCCBCCBEECE
T ss_pred EeCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHH-cCCCEEEEeC----CCCCccHHHHHHhCCCCCEEEEchh
Confidence 89876432 11111 111367777777776533 2221111111 456899888842 379999976543
Q ss_pred CCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005157 329 DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (711)
Q Consensus 329 ~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~ 362 (711)
....||+ .|.++.+.++...+.+.+++..
T Consensus 292 --~~~~Hs~---~E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 292 --EKDAHTP---NECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp --EBSTTST---TCEEEHHHHHHHHHHHHHHHHH
T ss_pred --hcccchh---hhheeHHHHHHHHHHHHHHHHh
Confidence 2347985 4778899999999988888765
No 48
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.14 E-value=5.5e-10 Score=123.02 Aligned_cols=135 Identities=14% Similarity=0.219 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005157 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (711)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi 166 (711)
+++.+.+++|.++ |.+.+ ++.++.+||.++|+++| ++++.+. ...|++
T Consensus 28 ~~~i~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G------~~v~~~~-----------------------~~~~l~ 75 (418)
T 1xmb_A 28 DWMVKIRRKIHEN-PELGY--EELETSKLIRSELELIG------IKYRYPV-----------------------AITGVI 75 (418)
T ss_dssp HHHHHHHHHHHHS-CCCTT--CCHHHHHHHHHHHHHHT------CCEEEEE-----------------------TTTEEE
T ss_pred HHHHHHHHHHHhC-CCCCC--ChHHHHHHHHHHHHHcC------CeeEecc-----------------------CCcEEE
Confidence 6788899999996 44433 45688999999999998 3444321 136899
Q ss_pred EEEcCCCCCCCCCCeEEEeecCcccCCCC-----------CC---CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 005157 167 LRILPKYASEAGENAILVSSHIDTVSAGE-----------GA---GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (711)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~sp-----------GA---~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~ 232 (711)
++++|+ .+ +.|++.+|+|+||... |. .+.+.|++++|++++.|++.+.+++++|+|+|+.+
T Consensus 76 a~~~~~----~~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~ 150 (418)
T 1xmb_A 76 GYIGTG----EP-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPA 150 (418)
T ss_dssp EEEESS----SS-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECC
T ss_pred EEEcCC----CC-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecc
Confidence 999764 23 7899999999998531 21 11238999999999999987777899999999999
Q ss_pred CCCCCcchHHHHhcCCCcCCceEEEEee
Q 005157 233 EEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (711)
Q Consensus 233 EE~gl~GS~~f~~~h~~~~~v~a~inLD 260 (711)
|| |..|++.++++.. .+++.++++++
T Consensus 151 EE-g~~G~~~~~~~g~-~~~~d~~i~~~ 176 (418)
T 1xmb_A 151 EE-GLSGAKKMREEGA-LKNVEAIFGIH 176 (418)
T ss_dssp TT-TTCHHHHHHHTTT-TTTEEEEEEEE
T ss_pred cc-ccccHHHHHHcCC-cCCCCEEEEEe
Confidence 99 9999999996543 22456667654
No 49
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.14 E-value=1.5e-10 Score=125.28 Aligned_cols=130 Identities=19% Similarity=0.217 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCH---HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005157 86 ELEAMKHVKALTQLGPHAVGSD---ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (711)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~---~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~ 162 (711)
.+++.+.+++|.+++ ...... ++.++.+||.++++ | ++++.+... .+.
T Consensus 8 ~~~~~~~l~~l~~ip-s~s~~~~~~~e~~~~~~l~~~l~--G------~~~~~~~~~--------------------~~~ 58 (369)
T 2f7v_A 8 LASTLEHLETLVSFD-TRNPPRAIAAEGGIFDYLRAQLP--G------FQVEVIDHG--------------------DGA 58 (369)
T ss_dssp HHHHHHHHHHHHHSC-CBTTTTCCCSSSHHHHHHHTTCT--T------CEEEEEECS--------------------TTC
T ss_pred hHHHHHHHHHHhCCC-CcCCCCCCccHHHHHHHHHHHhC--C------CceEEEEcC--------------------CCc
Confidence 478899999999973 333112 45689999999998 5 344443210 034
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecCcccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005157 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (711)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------spGA~Dd~sGva~~LE~ar~L~~~~~~~~~ 223 (711)
.|+++ ++|+ +.|++.+|+|+||. ++|+.||+.|++++|++++. +++
T Consensus 59 ~~~~a-~~g~-------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~ 123 (369)
T 2f7v_A 59 VSLYA-VRGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDG 123 (369)
T ss_dssp EEEEE-EESC-------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCC
T ss_pred eEEEE-EcCC-------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCC
Confidence 79999 8642 56999999999974 37899999999999999976 678
Q ss_pred cEEEEEeCCCCC-CCcchHHHHhcCCCcCCceEEEEeecC
Q 005157 224 AVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (711)
Q Consensus 224 ~I~flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~inLD~~ 262 (711)
+|.|+|+.+||. |+.|++.++++.. +..+++++|..
T Consensus 124 ~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 124 DAAFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp CEEEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred CEEEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999999 8899999996544 45677777753
No 50
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.10 E-value=2.9e-10 Score=127.74 Aligned_cols=139 Identities=14% Similarity=0.227 Sum_probs=104.4
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005157 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (711)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~ 162 (711)
+++.+++++.+++|.++ |.+.+ ++.++.+||.+++++++ ++++.+ ..
T Consensus 7 ~~~~~~~~~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G------~~~~~~------------------------~~ 53 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAI-PHPSY--KEEQLAQFIINWAKTKG------FFAERD------------------------EV 53 (487)
T ss_dssp CSSSHHHHHHHHHHHHS-CCBTT--CCHHHHHHHHHHHHHTT------CEEEEC------------------------TT
T ss_pred ccCHHHHHHHHHHHHcC-CCCCC--cHHHHHHHHHHHHHHcC------CEEEEc------------------------CC
Confidence 46778999999999997 44433 34689999999999998 334331 23
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecCcccCCC------------------------CCCC---CChhHHHHHHHHHHHHH
Q 005157 163 NHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVMS 215 (711)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s------------------------pGA~---Dd~sGva~~LE~ar~L~ 215 (711)
.|++++++|+. +.++.+.|++.+|+|+||.. +|+. ||+.|+|++|++++.
T Consensus 54 ~nv~a~~~g~~-g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~-- 130 (487)
T 2qyv_A 54 GNVLIRKPATV-GMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES-- 130 (487)
T ss_dssp CCEEEEECCCT-TCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC--
T ss_pred CcEEEEeCCCC-CCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh--
Confidence 59999998631 00245789999999999863 3776 999999999999973
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecC
Q 005157 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (711)
Q Consensus 216 ~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~ 262 (711)
.+ .++++|.|+|+.+||.|..|++.++++. . +...++++|..
T Consensus 131 -~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~ 172 (487)
T 2qyv_A 131 -ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTE 172 (487)
T ss_dssp -SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCC
T ss_pred -CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccC
Confidence 23 4778999999999999999999988532 1 25566777654
No 51
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.09 E-value=1.7e-09 Score=117.15 Aligned_cols=223 Identities=17% Similarity=0.191 Sum_probs=152.1
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEE
Q 005157 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (711)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~ 167 (711)
+.++.|++|+++ |.+.|.++ .++++|+.+++++++. ++++| +..|+++
T Consensus 10 ~~~~~l~~L~~i-pspSG~E~-~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNvi~ 57 (354)
T 2vpu_A 10 VDWKLMQEIIEA-PGVSGYEH-LGIRDIVVDVLKEVAD------EVKVD------------------------KLGNVIA 57 (354)
T ss_dssp CCHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHHTTCS------EEEEC------------------------TTCCEEE
T ss_pred HHHHHHHHHHhC-CCCCcccH-HHHHHHHHHHHHHhCC------EEEEc------------------------CCCeEEE
Confidence 357889999997 67777553 2789999999999872 44442 3579999
Q ss_pred EEcCCCCCCCCCCeEEEeecCcccCC--------C---------------------------------------------
Q 005157 168 RILPKYASEAGENAILVSSHIDTVSA--------G--------------------------------------------- 194 (711)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~aH~DSv~~--------s--------------------------------------------- 194 (711)
+++|+ . +.|++.||+|+|+. +
T Consensus 58 ~~~g~-----~-~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~ 131 (354)
T 2vpu_A 58 HFKGS-----S-PRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQE 131 (354)
T ss_dssp EECCS-----S-SEEEEECCCCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC----
T ss_pred EEcCC-----C-CEEEEEecccccceeEEEECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCccc
Confidence 98764 2 78999999998762 0
Q ss_pred -------------------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005157 195 -------------------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (711)
Q Consensus 195 -------------------------------------------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I 225 (711)
..+-||..||++++|+++.+++ ++.++
T Consensus 132 ~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v 207 (354)
T 2vpu_A 132 DKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADI 207 (354)
T ss_dssp -----CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEE
T ss_pred ccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeE
Confidence 3588999999999999998753 67999
Q ss_pred EEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEeecCcCCCCc-------c-----cc-ccCC-CHHHHHHHHHHccCCC
Q 005157 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS-------A-----LF-QAGP-NLWAVENFAAVAKYPS 291 (711)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD~~G~gG~~-------~-----lf-qtg~-~~~l~~~~~~~a~~p~ 291 (711)
+++|++-||.|+.|++......+ . ..+|.+|+.-++.+. . .. ++.+ ++.+.+...+.++. .
T Consensus 208 ~~~ft~qEEVG~~ga~~aa~~i~--p--d~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~-~ 282 (354)
T 2vpu_A 208 YIVGSVQEEVGLRGARVASYAIN--P--EVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKK-Y 282 (354)
T ss_dssp EEEECSCCTTTSHHHHHHHHHHC--C--SEEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHH-T
T ss_pred EEEEECCcccCccchhhhhcccC--C--CEEEEecccccCCCCcccccCceECCcceEcCCCCCCHHHHHHHHHHHHH-c
Confidence 99999999999999886653221 1 256777764322211 0 11 1122 67777776665422 1
Q ss_pred CcccccccccCCCCCCCCchHHHhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005157 292 GQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (711)
Q Consensus 292 ~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~ 365 (711)
+...-.+... -+.+||-..+.. ..|+|..++..- .. +.||+ .|.++.+.+++..+.+.++++.+..
T Consensus 283 gIp~q~~~~~---g~gGtDa~~i~~a~~Gipt~~Igvp-~~-~~Hs~---~E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 283 EIPLQVEPSP---RPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQ---VELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp TCCCEEEECC---SCCSSTHHHHHTSTTCCEEEEEEEE-EB-STTST---TCEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEeCC---CCCccHHHHHHHhcCCCCEEEECcc-cc-cCcCc---ceEeeHHHHHHHHHHHHHHHHhccH
Confidence 1111111111 124799888753 368999997532 22 37886 4678899999999999999988644
No 52
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.09 E-value=8.2e-10 Score=121.09 Aligned_cols=137 Identities=15% Similarity=0.160 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005157 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (711)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NV 165 (711)
.+++.+.+++|.++ |.+.+ ++.++.+||.++++++| ++++.+ . .+..|+
T Consensus 31 ~~~~i~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G------~~v~~~----~------------------~~~~nv 79 (404)
T 1ysj_A 31 HTRLINMRRDLHEH-PELSF--QEVETTKKIRRWLEEEQ------IEILDV----P------------------QLKTGV 79 (404)
T ss_dssp HHHHHHHHHHHHHS-CCCTT--CCHHHHHHHHHHHHHTT------CEECCC----T------------------TCSSCE
T ss_pred HHHHHHHHHHHHhc-CCCCC--ChHHHHHHHHHHHHHcC------CceEEe----c------------------cCCceE
Confidence 46788899999996 44433 44688999999999998 233221 0 023699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCcccCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 005157 166 VLRILPKYASEAGENAILVSSHIDTVSAGE-----------G---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (711)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~sp-----------G---A~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~ 231 (711)
+++++|+ .+.+.|++.+|+|+||... | +.|.+.|++++|++++.|++.+.+++++|+|+|+.
T Consensus 80 ~a~~~g~----~~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 155 (404)
T 1ysj_A 80 IAEIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQP 155 (404)
T ss_dssp EEEEECS----SCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEES
T ss_pred EEEEeCC----CCCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEec
Confidence 9999864 2457899999999998531 2 12345899999999999998766789999999999
Q ss_pred CCCCCCcchHHHHhcCCCcCCceEEEEe
Q 005157 232 GEEEGLNGAHSFVTQHPWSTTIRVAVDL 259 (711)
Q Consensus 232 ~EE~gl~GS~~f~~~h~~~~~v~a~inL 259 (711)
+||. ..|++.++++. ..+++.+++.+
T Consensus 156 ~EE~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 156 AEEI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp CTTT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred cccc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 9999 78999999643 22345566655
No 53
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.98 E-value=1.7e-09 Score=118.38 Aligned_cols=141 Identities=14% Similarity=0.078 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005157 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (711)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NV 165 (711)
.+++.+.+++|.++ |. -|.++.++.+||.++|+++| ++++.+. . .+..|+
T Consensus 15 ~~~~~~~~~~l~~~-pe--~s~~E~~~~~~i~~~l~~~G------~~v~~~~--~-------------------g~~~~v 64 (394)
T 3ram_A 15 KYSYIEISHRIHER-PE--LGNEEIFASRTLIDRLKEHD------FEIETEI--A-------------------GHATGF 64 (394)
T ss_dssp HHHHHHHHHHHHHS-CC--CTTCCHHHHHHHHHHHHHTT------CEEEEEE--T-------------------TEEEEE
T ss_pred HHHHHHHHHHHHhC-CC--CCcchHHHHHHHHHHHHHcC------CeEEeCC--C-------------------CCceEE
Confidence 46778888888885 33 34555789999999999998 3444431 0 124699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecCcccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC-CcchH-HH
Q 005157 166 VLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG-LNGAH-SF 243 (711)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~g-l~GS~-~f 243 (711)
+++++|. .+.+.|++.+|+|+||.-..+.+...-.+++|.+++.|++.+.+++++|.|+|+.+||.| ..|++ .+
T Consensus 65 ia~~~g~----~~g~~i~l~ah~D~vpg~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~ 140 (394)
T 3ram_A 65 IATYDSG----LDGPAIGFLAEYDALPGLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASY 140 (394)
T ss_dssp EEEEECS----SSSCEEEEEECCCCCTTTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHH
T ss_pred EEEEeCC----CCCCEEEEEEecccCCCcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHH
Confidence 9999874 245899999999999832112222233477889999998765578899999999999998 58999 77
Q ss_pred HhcCCCcCCceEEEEeec
Q 005157 244 VTQHPWSTTIRVAVDLEA 261 (711)
Q Consensus 244 ~~~h~~~~~v~a~inLD~ 261 (711)
+++. ..+++.+++.+|.
T Consensus 141 ~~~g-~~~~~d~~~~~h~ 157 (394)
T 3ram_A 141 VKAG-VIDQIDIALMIHP 157 (394)
T ss_dssp HHHT-GGGGCSEEECCEE
T ss_pred HHcC-CcccCCEEEEECC
Confidence 7532 2234667777664
No 54
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.87 E-value=3.3e-08 Score=106.58 Aligned_cols=213 Identities=16% Similarity=0.266 Sum_probs=140.6
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEE
Q 005157 90 MKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRI 169 (711)
Q Consensus 90 ~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i 169 (711)
.+.|++|+++ |.+.|.+ +++++|+.+++++++. ++++| +..|+++++
T Consensus 14 ~~~l~~L~~~-pspSG~E--~~v~~~i~~~l~~~~~------e~~~D------------------------~~Gnvi~~~ 60 (343)
T 3isx_A 14 KELIRKLTEA-FGPSGRE--EEVRSIILEELEGHID------GHRID------------------------GLGNLIVWK 60 (343)
T ss_dssp HHHHHHHHHS-CCBTTCC--HHHHHHHHHHHTTTCS------EEEEC------------------------TTCCEEEEE
T ss_pred HHHHHHHHhC-CCCCCch--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCCEEEEE
Confidence 4578899986 6777755 5679999999999872 44443 457999987
Q ss_pred cCCCCCCCCCCeEEEeecCcccCC--------C-----------------------------------------------
Q 005157 170 LPKYASEAGENAILVSSHIDTVSA--------G----------------------------------------------- 194 (711)
Q Consensus 170 ~g~~~~~~~~~~Vll~aH~DSv~~--------s----------------------------------------------- 194 (711)
|+ +.+.|++.||+|+++. +
T Consensus 61 -g~-----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~ 134 (343)
T 3isx_A 61 -GS-----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKL 134 (343)
T ss_dssp -CC-----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTC
T ss_pred -CC-----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCC
Confidence 32 3478999999998752 0
Q ss_pred -----------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005157 195 -----------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (711)
Q Consensus 195 -----------------------------------------pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~E 233 (711)
..+-||..||++++|+++.++. +.+++++|+.-|
T Consensus 135 ~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qE 209 (343)
T 3isx_A 135 SFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQE 209 (343)
T ss_dssp CGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCC
T ss_pred CcceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCc
Confidence 2488999999999999998742 689999999999
Q ss_pred CCCCcchHHHHhcCCCcCCceEEEEeecCcCCC-C--------------cccccc-CC--CHHHHHHHHHHccCCCCccc
Q 005157 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-R--------------SALFQA-GP--NLWAVENFAAVAKYPSGQII 295 (711)
Q Consensus 234 E~gl~GS~~f~~~h~~~~~v~a~inLD~~G~gG-~--------------~~lfqt-g~--~~~l~~~~~~~a~~p~~~~l 295 (711)
|.|+.|++......+ . ..+|.+|+.-++. + .+-... +. ++.+.+...+.++. .+...
T Consensus 210 EVG~~Ga~~aa~~i~--p--d~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~-~gIp~ 284 (343)
T 3isx_A 210 EVGLVGASVAGYGVP--A--DEAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEK-FDIKY 284 (343)
T ss_dssp CTTSCCSTTTGGGCC--C--SEEEEEEEEECCCSTTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHH-TTCCC
T ss_pred ccCchhHHHHhhcCC--C--CEEEEEeCcCCCCCCCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHH-CCCCe
Confidence 999999976653322 2 2467777643322 1 111111 11 45566665554321 11111
Q ss_pred ccccccCCCCCCCCchHHHhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 005157 296 GQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (711)
Q Consensus 296 ~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll 360 (711)
-.+.+. ..+||-..+.. ..|+|..++..- .. +.||+. |.++.+.++++.+.+.+++
T Consensus 285 Q~~v~~----ggGTDa~~i~~a~~Gipt~~Igvp-~r-~~Hs~~---E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 285 QMEVLT----FGGTNAMGYQRTREGIPSATVSIP-TR-YVHSPS---EMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp EECCCB----CCCSSHHHHHHHTSSCCEEEEEEE-EB-STTSTT---EEECHHHHHHHHHHHHHHH
T ss_pred EEecCC----CCchHHHHHHHhcCCCCEEEEccc-cc-cccchh---hEecHHHHHHHHHHHHHHH
Confidence 111111 25789877643 369999988632 22 378864 6778888888888777665
No 55
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.82 E-value=3.9e-08 Score=109.27 Aligned_cols=159 Identities=15% Similarity=0.166 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEe--eecc--CCCc----------c-cccc
Q 005157 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDF--FHAK--SGAN----------R-VGTG 150 (711)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~--f~~~--~g~~----------~-~~g~ 150 (711)
.+++.+..++|.++ |- -+.++.++.+||.++|+++| ++++... .+.. .|.. + ..-|
T Consensus 13 ~~~~~~~~~~lh~~-Pe--~~~~E~~t~~~i~~~L~~~G------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (445)
T 3io1_A 13 APSMTQWRRDFHLH-AE--SGWLEFRTASKVADILDGLG------YQLALGRDVIDADSRMGLPDEETLARAFERAREQG 83 (445)
T ss_dssp HHHHHHHHHHHHHT-CC--CTTCCHHHHHHHHHHHHHTT------CEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhC-CC--CCCcHHHHHHHHHHHHHHCC------CeEEecccccccccccccccchhhhhhhhhhcccc
Confidence 46777778888874 33 34455679999999999998 3333210 0000 0000 0 0000
Q ss_pred cccCcccccc--ccceEEEEEcCCCCCCCCCCeEEEeecCcccCCC------------------CCC---CCChhHHHHH
Q 005157 151 VFKGKTLIYS--DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------EGA---GDCSSCVAVM 207 (711)
Q Consensus 151 ~~~~~~~~Y~--~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~s------------------pGA---~Dd~sGva~~ 207 (711)
..+...... ...||+++++|+ .+.+.|++.+|+|++|.. +|. .+...++|++
T Consensus 84 -~~~~~~~~~~~~~~~vva~~~~~----~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~ 158 (445)
T 3io1_A 84 -APERWLPAFEGGFAGVVATLDTG----RPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIG 158 (445)
T ss_dssp -CCTTTGGGGTTTCCCEEEEEECS----SCCCEEEEEEECCCCCC-------------------------CTTCTHHHHH
T ss_pred -ccccccccccCCCCEEEEEEeCC----CCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHH
Confidence 000000001 358999999874 245899999999999952 121 1112469999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCCcCCceEEEEee
Q 005157 208 LELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (711)
Q Consensus 208 LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~inLD 260 (711)
|.+++.|++.+.+++++|.|+|..+|| +..|++.++++. ..+++.+++.+|
T Consensus 159 l~aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h 209 (445)
T 3io1_A 159 LGLAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIH 209 (445)
T ss_dssp HHHHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEE
T ss_pred HHHHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEe
Confidence 999999998777899999999999999 668999999542 334567777765
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.54 E-value=1.4e-06 Score=89.86 Aligned_cols=57 Identities=14% Similarity=0.108 Sum_probs=44.4
Q ss_pred CCCCchHHHhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005157 306 ETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (711)
Q Consensus 306 ps~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~~ 367 (711)
+..||-..|.. ..|+|.+.+.-. .. ..||+. |+++.+.+++..+.+.+++++|...+
T Consensus 294 ~ggTDa~~~~~~~~Giptv~~G~g-~~-~~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~d 351 (354)
T 2wzn_A 294 PTGTDANVMQINKEGVATAVLSIP-IR-YMHSQV---ELADARDVDNTIKLAKALLEELKPMD 351 (354)
T ss_dssp CCSSHHHHHHTSTTCCEEEEEEEE-EB-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ccccHHHHHHHhcCCCCEEEECcc-cC-CCCccc---EEEEHHHHHHHHHHHHHHHHhCcccc
Confidence 46899887743 269999987653 23 369965 88999999999999999999986543
No 57
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=94.06 E-value=0.06 Score=59.01 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=40.9
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 005157 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE 125 (711)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~ 125 (711)
...++.++++++++.|++ ++|..||++++++.+|+.++++++|.
T Consensus 10 ~~~i~~~~~~~~l~~Ls~-~~R~~Gs~g~~~a~~yi~~~~~~~Gl 53 (421)
T 2ek8_A 10 TKRTDAENMYNTIQFLSQ-APRVAGSPEELKAVRYIEQQFKSYGY 53 (421)
T ss_dssp HTTCCHHHHHHHHHHHTT-SCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 357999999999999998 49999999999999999999999984
No 58
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=93.44 E-value=0.089 Score=58.23 Aligned_cols=42 Identities=26% Similarity=0.329 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 005157 84 FSELEAMKHVKALT-QLGPHAVGSDALDRALQYVLAASQKIKE 125 (711)
Q Consensus 84 fs~erA~~~L~~L~-~igpr~~GS~~~~~a~~yL~~~l~~ig~ 125 (711)
++.+++++++++|+ ++|+|..||++++++.+|+.++|++.|.
T Consensus 18 ~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~ 60 (444)
T 3iib_A 18 QSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGF 60 (444)
T ss_dssp HHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred hcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 45678999999999 5999999999999999999999999984
No 59
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=93.26 E-value=0.18 Score=55.62 Aligned_cols=152 Identities=14% Similarity=0.021 Sum_probs=87.3
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcCCC--cCCc-------------eEEEE
Q 005157 194 GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTI-------------RVAVD 258 (711)
Q Consensus 194 spGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h~~--~~~v-------------~a~in 258 (711)
...+-||..||+++||+++.+. +++.+++++| +-||.|..|++.-...... .+++ ..+|.
T Consensus 230 ~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is 304 (428)
T 2ijz_A 230 AGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVS 304 (428)
T ss_dssp SCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEE
T ss_pred EeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEE
Confidence 3578899999999999998764 4567888888 9999999999876533211 0111 57788
Q ss_pred eecCcCCCCc------------------ccc---ccC-CCHHHHHHHHHH---ccCCCCcccccccccCCCCCCCCchHH
Q 005157 259 LEAMGIGGRS------------------ALF---QAG-PNLWAVENFAAV---AKYPSGQIIGQDLFASGVFETATDFQV 313 (711)
Q Consensus 259 LD~~G~gG~~------------------~lf---qtg-~~~~l~~~~~~~---a~~p~~~~l~~~~f~~g~ips~TD~~~ 313 (711)
+|+.-+..+. +-. |.. +++.+...+.+. ..-|+-. +..+. -.+++||-.+
T Consensus 305 ~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~----~~~~~-d~~gGsd~g~ 379 (428)
T 2ijz_A 305 ADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQS----FVTRS-DMGCGSTIGP 379 (428)
T ss_dssp ECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCB----CCCCS-SCCCCCCCST
T ss_pred EecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEE----EEEeC-CCCccchHHH
Confidence 8875442221 111 111 244444333332 2333211 11111 1346777777
Q ss_pred Hhh-cCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 005157 314 YTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (711)
Q Consensus 314 F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll 360 (711)
+.. ..|+|.+|+.. +.-.-||+.-+...- .++++.+.+.+++
T Consensus 380 i~~~~~Gi~tvdiGi--p~~~mHS~~E~~~~~---D~~~~~~ll~af~ 422 (428)
T 2ijz_A 380 ITASQVGVRTVDIGL--PTFAMHSIRELAGSH---DLAHLVKVLGAFY 422 (428)
T ss_dssp TTGGGGSCCEEEECC--CCCSCSSSSCCCCSS---HHHHHHTTHHHHT
T ss_pred HHHhCCCCCEEEEch--hhcccchHHHHhhHH---HHHHHHHHHHHHH
Confidence 643 47999999853 223468876655544 4455444444443
No 60
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=92.36 E-value=0.18 Score=56.06 Aligned_cols=151 Identities=12% Similarity=0.012 Sum_probs=85.9
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHHhcC-------------C--C------cCCce
Q 005157 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQH-------------P--W------STTIR 254 (711)
Q Consensus 196 GA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~~~h-------------~--~------~~~v~ 254 (711)
++-||-.||.+++|+++.+ .++.++++++++-||.|+.|++.-.... + . .-.-.
T Consensus 246 ~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~~~l~~s 320 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLDEVLENT 320 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHHHHHHSC
T ss_pred ecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHHHhhcCC
Confidence 5789999999999999875 3578999999999999988766432110 0 0 00123
Q ss_pred EEEEeecCcCC------------------CCccccccC---------CCHHHHHHHHHHc---cCCCCcccccccccCC-
Q 005157 255 VAVDLEAMGIG------------------GRSALFQAG---------PNLWAVENFAAVA---KYPSGQIIGQDLFASG- 303 (711)
Q Consensus 255 a~inLD~~G~g------------------G~~~lfqtg---------~~~~l~~~~~~~a---~~p~~~~l~~~~f~~g- 303 (711)
.+|..|+.-+. |+.+-..++ +++.....+++.+ .-|+ |. |..|
T Consensus 321 ~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~-----Q~-~~~gr 394 (450)
T 2glf_A 321 SVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIW-----QV-ATLGK 394 (450)
T ss_dssp EEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCE-----EE-CCSSS
T ss_pred eEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCE-----EE-EEecc
Confidence 45666654321 111111111 2555554444432 2221 11 1111
Q ss_pred -CCCCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005157 304 -VFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (711)
Q Consensus 304 -~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~ 362 (711)
-.+++||-.++....|+|.+|+.-- .-+-||+.-+.. ...+.++.+.+.+++..
T Consensus 395 ~d~~gGstig~i~a~~Gi~tvdiGiP--~l~MHS~~E~~~---~~D~~~~~~l~~af~~~ 449 (450)
T 2glf_A 395 VDQGGGGTIAKFFAERGSDVIDMGPA--LLGMHSPFEISS---KADLFETYVAYRSLMEK 449 (450)
T ss_dssp TTSCCCCCTHHHHHTTTSCEEEEECE--EBSTTSSSEEEE---HHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHhCCCCcEEEechh--hcccchHHHHhh---HHHHHHHHHHHHHHHHh
Confidence 1456677666655589999998632 224688876554 44555555555555543
No 61
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=87.58 E-value=0.72 Score=54.01 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 005157 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE 125 (711)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~~~~a~~yL~~~l~~ig~ 125 (711)
..++.++++++|+.++++ ||..||+++.++++|+.+++++.|.
T Consensus 20 ~~~~~~~i~~~l~~lt~~-ph~aGt~~~~~~a~yi~~~~~~~Gl 62 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTKL-PHLAGTEQNFLLAKKIQTQWKKFGL 62 (707)
T ss_dssp HHCCHHHHHHHHHHHSSS-CCCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHhcC-CCcCCCHhHHHHHHHHHHHHHHcCC
Confidence 468999999999999995 9999999999999999999999984
No 62
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=81.80 E-value=1.4 Score=49.28 Aligned_cols=160 Identities=13% Similarity=0.013 Sum_probs=85.2
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC----CCCCCcEEEEEeCCCCCCCcchHHHHhcC-CC-----------------cCC
Q 005157 195 EGAGDCSSCVAVMLELARVMSQWA----HEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-----------------STT 252 (711)
Q Consensus 195 pGA~Dd~sGva~~LE~ar~L~~~~----~~~~~~I~flf~~~EE~gl~GS~~f~~~h-~~-----------------~~~ 252 (711)
.++-||-.||.+++|+++.+.+.. ..+. ..++++++-||.|+.|++.-.... |. .-.
T Consensus 281 s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~-~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~ 359 (496)
T 3vat_A 281 APRLDNLHSCFCALQALIDSCSAPASLAADPH-VRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIP 359 (496)
T ss_dssp ETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCS-EEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGG
T ss_pred eeccccHHHHHHHHHHHHhhhccccccccCCC-cEEEEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhh
Confidence 357899999999999998875310 0123 444999999999987665532110 00 011
Q ss_pred ceEEEEeecCcCC------------------CCcccccc----CCCHHHHHHHHHHc---cCCCCcccccccccCCCCC-
Q 005157 253 IRVAVDLEAMGIG------------------GRSALFQA----GPNLWAVENFAAVA---KYPSGQIIGQDLFASGVFE- 306 (711)
Q Consensus 253 v~a~inLD~~G~g------------------G~~~lfqt----g~~~~l~~~~~~~a---~~p~~~~l~~~~f~~g~ip- 306 (711)
-..+|..|+.-+. |+.+-+.. .+++.....+++.+ .-|+-. .......+
T Consensus 360 ~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~-----~v~r~D~~g 434 (496)
T 3vat_A 360 KSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQD-----LMVRNDSPC 434 (496)
T ss_dssp GCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEE-----ECCCTTSCC
T ss_pred cCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEE-----EEecCCCCC
Confidence 2367777764221 11111111 12555544444432 333321 11111123
Q ss_pred CCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005157 307 TATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (711)
Q Consensus 307 s~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~ 365 (711)
+.|+-.+.....|+|.+|+.-- .-+-||+.-+... ..++++.+.+.+++..+..
T Consensus 435 GgTig~i~~s~~Gi~tvdIGiP--~ryMHS~~E~~~~---~D~~~~v~Ll~af~~~~~~ 488 (496)
T 3vat_A 435 GTTIGPILASRLGLRVLDLGSP--QLAMHSIRETACT---TGVLQTITLFKGFFELFPS 488 (496)
T ss_dssp CCCHHHHHHHHHTCEEEEEECE--EESTTSSSEEEES---HHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHhcccCCcEEEecHh--hhccccHHHHhhH---HHHHHHHHHHHHHHHhHHH
Confidence 3455444433479999998631 1246998766554 4455666666666665543
No 63
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=80.89 E-value=0.54 Score=54.43 Aligned_cols=44 Identities=20% Similarity=0.243 Sum_probs=39.5
Q ss_pred CCCHHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 005157 83 GFSELEAMKHVKALTQ--LGPHAVGSDALDRALQYVLAASQKIKES 126 (711)
Q Consensus 83 ~fs~erA~~~L~~L~~--igpr~~GS~~~~~a~~yL~~~l~~ig~~ 126 (711)
.++++++++||+.|++ +++|..||++++++++||.+++++.|.+
T Consensus 14 ~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 14 KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 4566789999999998 5899999999999999999999999853
No 64
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=78.93 E-value=0.6 Score=51.97 Aligned_cols=46 Identities=24% Similarity=0.211 Sum_probs=38.4
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHH
Q 005157 195 EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFV 244 (711)
Q Consensus 195 pGA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~ 244 (711)
.++-||..||.++||+++.+. .+++++++++++-||.|..|++.-.
T Consensus 257 s~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ga~ 302 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATGMQ 302 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTTSS
T ss_pred EecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCccccccc
Confidence 357899999999999988653 4678999999999999998876543
No 65
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=76.78 E-value=0.41 Score=53.21 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=32.4
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcchHHHH
Q 005157 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFV 244 (711)
Q Consensus 196 GA~Dd~sGva~~LE~ar~L~~~~~~~~~~I~flf~~~EE~gl~GS~~f~ 244 (711)
++-||..||+++||+++.+.+ .++++++++|++-||.|..|++.-.
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga~ 297 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGLD 297 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------C
T ss_pred ecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhhc
Confidence 578999999999999886532 4678999999999999998887543
No 66
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=66.57 E-value=11 Score=31.42 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=46.8
Q ss_pred CCCCCchHHHhhcCCceEEEEeeeCCC-CCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005157 305 FETATDFQVYTEVAGLSGLDFAYTDKS-AVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (711)
Q Consensus 305 ips~TD~~~F~~~~GIPgld~a~~~~~-~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~~ 367 (711)
.++.||-+.|.. .|+|.+.+.-.... ..-|+.. |+++.+.+.+..+....+++++.+.+
T Consensus 23 ~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~d---E~v~i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 23 MPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHD---ERLHEAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp CCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTT---CEEEHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eceeCcHHHHHH-cCCCEEEECCCCCCcccccCCC---CeeEHHHHHHHHHHHHHHHHHHHcCC
Confidence 467899999998 79999887543321 2457753 78899999999999999999998863
No 67
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=44.38 E-value=21 Score=23.79 Aligned_cols=18 Identities=17% Similarity=0.383 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 005157 631 VIFAVVIAVVSCLTLVYL 648 (711)
Q Consensus 631 ~~ia~~~a~~~~l~~~~l 648 (711)
-+||.++|+.+++.++|-
T Consensus 7 eviaglvalltflafgfw 24 (32)
T 2lx0_A 7 EVIAGLVALLTFLAFGFW 24 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 578999999999999984
No 68
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=37.68 E-value=16 Score=40.02 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=41.4
Q ss_pred CCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEE
Q 005157 105 GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILV 184 (711)
Q Consensus 105 GS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll 184 (711)
.|+..-.+.+++.++|++.|.+.-.+ .+.+..++|. .++ .-.+..||++...|++- ...++.+++
T Consensus 14 ~~~t~~h~v~~~~~~l~~~Gf~~l~e----~~~w~l~~g~-----k~~-----~~~~~g~lia~~~G~~~-~~~~~~~ii 78 (428)
T 2ijz_A 14 ASPTPFHATASLARRLEAAGYRRLDE----RDAWHTETGG-----RYY-----VTRNDSSLIAIRLGRRS-PLESGFRLV 78 (428)
T ss_dssp TTHHHHHHHCCSHHHHHHHHHHHSCC------------CC-----CCE-----ECTTTTCCEEEECC--C-CSTTCCEEE
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEccc----ccccccCCCC-----EEE-----EECCCCEEEEEEECCcC-CCCCCcEEE
Confidence 46777789999999999998532211 1211111110 111 01133799998877521 123478999
Q ss_pred eecCcccC
Q 005157 185 SSHIDTVS 192 (711)
Q Consensus 185 ~aH~DSv~ 192 (711)
+||.|++.
T Consensus 79 ~AH~Dspg 86 (428)
T 2ijz_A 79 GAHTDSPC 86 (428)
T ss_dssp ECBCCCSE
T ss_pred EEcCCcCC
Confidence 99999964
No 69
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=36.91 E-value=54 Score=25.47 Aligned_cols=37 Identities=16% Similarity=0.389 Sum_probs=17.2
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Q 005157 621 PGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGAKG 659 (711)
Q Consensus 621 ~~~~Pd~~~d~~ia~~~a~~~~l~~~~l~p~~~~~~~~~ 659 (711)
|..+|-|+ .++|++.++..+..+.+++=-+..|+|++
T Consensus 4 ~~~vp~Wi--Ii~svl~GLLLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 4 PGRVPLWV--ILLSAFAGLLLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp CCCCCTHH--HHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CccCchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 34577774 44444444444333344443444455443
No 70
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=35.02 E-value=75 Score=34.96 Aligned_cols=68 Identities=10% Similarity=-0.025 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEe
Q 005157 106 SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVS 185 (711)
Q Consensus 106 S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~Vll~ 185 (711)
|+..-.+.+++.++|++.|.+.-.+. +. -++| +.++ .-.+..|+++...|+ ...++.++++
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~----~~--l~~g-----~k~~-----~~r~~~~lia~~~g~---~~~~g~~ii~ 90 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDF----AG--DPMN-----MTVY-----AVNRGKAIAAFRVVD---DLKRGLNLVV 90 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSC----CS--CTTS-----BCEE-----EESSSSCEEEEEBCS---CGGGCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccc----cC--CCCC-----CEEE-----EEcCCCEEEEEEeCC---CCCCCeEEEE
Confidence 34445689999999999884321111 10 1111 1111 011237999987774 1234789999
Q ss_pred ecCcccC
Q 005157 186 SHIDTVS 192 (711)
Q Consensus 186 aH~DSv~ 192 (711)
||.|++.
T Consensus 91 AH~Dsp~ 97 (450)
T 2glf_A 91 AHIDSPR 97 (450)
T ss_dssp EECCCCE
T ss_pred EecccCC
Confidence 9999864
No 71
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=23.80 E-value=84 Score=33.16 Aligned_cols=55 Identities=18% Similarity=0.232 Sum_probs=42.9
Q ss_pred CCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005157 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (711)
Q Consensus 306 ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~ 366 (711)
+..||...|.+ .|+|++.+.. . ...-|++. |+++.+.+....+.+..++..++..
T Consensus 340 ~g~tD~~~~~~-~giP~~~~g~-g-~~~~H~~~---E~v~~~~l~~~~~~~~~~~~~l~~~ 394 (396)
T 3rza_A 340 GGGSDGSIINT-FGIPSVILGV-G-YEKIHTTN---ERMPIKSLNLLASQVLEIIKIVARQ 394 (396)
T ss_dssp SSCCHHHHHGG-GTCCEEEEEC-C-CBSTTSTT---CEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeccHHHHhh-CCCcEEEECC-C-CCCCCCCc---ceeEHHHHHHHHHHHHHHHHHHHHh
Confidence 46899999987 7999986532 2 23467754 6678999999999999999998753
No 72
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=23.39 E-value=43 Score=35.36 Aligned_cols=56 Identities=11% Similarity=0.088 Sum_probs=42.1
Q ss_pred CCCCCchHHHhhcCCceEEEEeeeCCCCCCCC-CCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005157 305 FETATDFQVYTEVAGLSGLDFAYTDKSAVYHT-KNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (711)
Q Consensus 305 ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT-~~Dt~d~i~~~sLq~~g~~vl~ll~~La~ 365 (711)
.+..||...|.. .|+|++. .+.......|+ +. |+++.+.+....+.+..++..+++
T Consensus 335 ~~g~tD~~~~~~-~giP~~~-~~G~~~~~~H~~~~---E~i~~~~l~~~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 335 TGGGTDAAYAAL-SGKPVIE-SLGLPGFGYHSDKA---EYVDISAIPRRLYMAARLIMDLGA 391 (393)
T ss_dssp BSCCCTHHHHGG-GSCCEEC-CCSCEEECTTSSSC---CEEEGGGHHHHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHh-CCCCEEE-eCCCCCCCccCCCc---ceEEehhHHHHHHHHHHHHHHHhc
Confidence 346799999987 7899972 23222234677 44 778899999999999999999875
No 73
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=22.16 E-value=96 Score=32.24 Aligned_cols=52 Identities=17% Similarity=0.254 Sum_probs=40.9
Q ss_pred CCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 005157 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQT 363 (711)
Q Consensus 306 ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~L 363 (711)
+..||+..|.+ .|+|++.+.. . ...-|++. |+++.+.+....+.+..+++.+
T Consensus 320 ~g~~D~~~~~~-~gip~~~~g~-~-~~~~H~~~---E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 320 GGGSDANVIAG-HGIPTVNLAV-G-YEEIHTTN---EKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp SSCCHHHHHHH-TTCCEEEEEC-C-CBSTTSTT---CEEEHHHHHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHh-CCCCEEEecC-C-CCcCcCCc---eEEEHHHHHHHHHHHHHHHHHh
Confidence 46799999987 7999986532 2 23467764 6889999999999999998876
No 74
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=21.74 E-value=62 Score=34.52 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=43.4
Q ss_pred CCCCchHHHhhcCCceEEEEeeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005157 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (711)
Q Consensus 306 ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~i~~~sLq~~g~~vl~ll~~La~~ 366 (711)
+..+|...|.+..|+|++.+. ......|++. |+++.+.+....+.+..++..+.+.
T Consensus 375 ~g~~D~~~~~~~~giP~v~~G--p~~~~~H~~~---E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 375 TAVNDTRYYSVDYGIPALCYG--PYGQGPHAFD---ERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp SSCCTHHHHHHTTCCCEEECC--CCEECTTSTT---CEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred eeeccHHHHHhhCCCCEEEEC--CCCccCCCCC---ceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 467999999875699998532 2234568764 6788999999999999999988764
No 75
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.24 E-value=1.7e+02 Score=22.71 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=15.0
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 005157 623 GTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGAK 658 (711)
Q Consensus 623 ~~Pd~~~d~~ia~~~a~~~~l~~~~l~p~~~~~~~~ 658 (711)
.+|-|+ .++|++.++..+..+.+++=-+..|+|+
T Consensus 9 ~vp~wi--Ii~svl~GLllL~li~~~LwK~GFFkR~ 42 (54)
T 2knc_A 9 AIPIWW--VLVGVLGGLLLLTILVLAMWKVGFFKRN 42 (54)
T ss_dssp TCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CcchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 467664 4444444433333333333334445444
Done!